Query 014832
Match_columns 417
No_of_seqs 505 out of 1433
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 08:57:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014832.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014832hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05631 DUF791: Protein of un 100.0 5.2E-33 1.1E-37 243.9 34.0 334 4-338 1-334 (354)
2 KOG4332 Predicted sugar transp 100.0 2.3E-34 5E-39 237.9 22.8 403 1-411 1-404 (454)
3 COG2814 AraJ Arabinose efflux 100.0 1.5E-31 3.2E-36 240.3 30.7 324 48-406 24-354 (394)
4 TIGR00903 2A0129 major facilit 100.0 4.4E-31 9.6E-36 244.1 31.0 325 54-407 8-336 (368)
5 PRK10406 alpha-ketoglutarate t 100.0 3E-30 6.5E-35 245.3 32.1 334 39-398 20-383 (432)
6 TIGR00900 2A0121 H+ Antiporter 100.0 4.3E-30 9.3E-35 239.2 30.8 342 42-407 4-357 (365)
7 TIGR00890 2A0111 Oxalate/Forma 100.0 1.3E-30 2.7E-35 243.8 25.2 324 57-407 23-351 (377)
8 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.1E-29 2.4E-34 239.6 31.7 343 37-409 4-391 (412)
9 PRK14995 methyl viologen resis 100.0 1.8E-29 3.9E-34 243.7 33.8 344 40-406 5-406 (495)
10 PRK03545 putative arabinose tr 100.0 1.5E-29 3.2E-34 237.7 32.2 315 55-406 27-348 (390)
11 PRK11551 putative 3-hydroxyphe 100.0 1.1E-29 2.5E-34 239.9 30.7 344 36-409 10-366 (406)
12 COG2271 UhpC Sugar phosphate p 100.0 4.2E-30 9.1E-35 227.8 23.5 349 33-405 21-401 (448)
13 PRK09952 shikimate transporter 100.0 3.2E-29 7E-34 238.3 31.4 342 38-405 19-398 (438)
14 TIGR00891 2A0112 putative sial 100.0 3.5E-29 7.6E-34 236.5 31.3 346 35-407 6-384 (405)
15 TIGR01299 synapt_SV2 synaptic 100.0 2.1E-29 4.5E-34 248.0 29.8 346 35-407 161-704 (742)
16 PRK10213 nepI ribonucleoside t 100.0 1.3E-28 2.8E-33 231.0 33.8 314 57-405 40-358 (394)
17 PRK10642 proline/glycine betai 100.0 5.2E-29 1.1E-33 240.3 31.0 343 40-405 15-396 (490)
18 PF07690 MFS_1: Major Facilita 100.0 5.8E-30 1.3E-34 237.2 22.3 333 46-404 5-352 (352)
19 PRK15075 citrate-proton sympor 100.0 2.2E-28 4.8E-33 232.7 31.0 335 39-393 13-373 (434)
20 TIGR00710 efflux_Bcr_CflA drug 100.0 3.6E-28 7.8E-33 228.1 31.7 327 52-402 20-350 (385)
21 PRK11663 regulatory protein Uh 100.0 1.3E-28 2.7E-33 234.2 27.3 345 38-407 20-393 (434)
22 PRK15402 multidrug efflux syst 100.0 7.2E-28 1.6E-32 227.5 32.2 330 55-408 31-365 (406)
23 PRK12307 putative sialic acid 100.0 1.9E-28 4.1E-33 233.1 28.2 342 37-407 14-377 (426)
24 PRK09556 uhpT sugar phosphate 100.0 7.5E-29 1.6E-33 238.0 25.2 343 39-406 27-405 (467)
25 PLN00028 nitrate transmembrane 100.0 3.5E-28 7.6E-33 233.3 29.5 327 57-409 56-405 (476)
26 TIGR00711 efflux_EmrB drug res 100.0 2.7E-28 5.9E-33 236.0 29.0 331 54-406 19-403 (485)
27 PRK09874 drug efflux system pr 100.0 1.7E-27 3.7E-32 225.3 32.6 332 44-407 21-367 (408)
28 PRK12382 putative transporter; 100.0 1.1E-27 2.4E-32 225.2 31.0 329 39-407 17-358 (392)
29 PRK09705 cynX putative cyanate 100.0 6.1E-28 1.3E-32 226.5 28.8 315 56-406 28-348 (393)
30 PRK10489 enterobactin exporter 100.0 2.5E-28 5.5E-33 231.4 26.2 338 42-407 22-368 (417)
31 PRK05122 major facilitator sup 100.0 1E-27 2.2E-32 226.1 29.2 318 48-405 26-356 (399)
32 TIGR00895 2A0115 benzoate tran 100.0 8.5E-28 1.8E-32 226.5 27.7 344 36-408 12-395 (398)
33 TIGR00893 2A0114 d-galactonate 100.0 1.2E-27 2.7E-32 225.0 28.6 334 55-409 12-369 (399)
34 PRK10091 MFS transport protein 100.0 4.2E-27 9E-32 220.3 31.5 333 41-407 7-344 (382)
35 PRK11646 multidrug resistance 100.0 6.3E-27 1.4E-31 219.9 32.3 332 40-406 13-352 (400)
36 PRK10133 L-fucose transporter; 100.0 6.8E-27 1.5E-31 221.7 32.3 320 52-394 41-389 (438)
37 TIGR00899 2A0120 sugar efflux 100.0 3.6E-27 7.8E-32 220.5 30.0 332 45-407 5-343 (375)
38 PRK03699 putative transporter; 100.0 3.3E-27 7.2E-32 221.9 28.4 335 39-407 5-349 (394)
39 PRK11102 bicyclomycin/multidru 100.0 7.4E-27 1.6E-31 218.6 30.3 331 52-405 6-341 (377)
40 PRK10504 putative transporter; 100.0 6.2E-27 1.3E-31 225.5 29.9 330 54-406 27-408 (471)
41 PRK11195 lysophospholipid tran 100.0 2.6E-26 5.6E-31 215.3 32.3 338 39-408 5-351 (393)
42 PRK10077 xylE D-xylose transpo 100.0 1.6E-26 3.4E-31 223.3 31.8 346 37-407 8-420 (479)
43 TIGR00897 2A0118 polyol permea 100.0 2.7E-26 5.9E-31 216.2 32.0 346 36-407 12-370 (402)
44 PRK15011 sugar efflux transpor 100.0 2.2E-26 4.7E-31 216.2 31.1 339 35-407 13-360 (393)
45 PRK15403 multidrug efflux syst 100.0 9.3E-26 2E-30 212.9 34.7 325 55-402 34-362 (413)
46 TIGR00892 2A0113 monocarboxyla 100.0 4.9E-27 1.1E-31 224.2 25.9 348 34-408 12-390 (455)
47 PRK11273 glpT sn-glycerol-3-ph 100.0 1.6E-26 3.5E-31 220.9 29.5 341 36-402 24-398 (452)
48 PRK11043 putative transporter; 100.0 3.9E-26 8.4E-31 215.4 31.6 328 52-408 21-352 (401)
49 PRK10054 putative transporter; 100.0 3E-26 6.5E-31 215.0 30.2 339 36-405 6-351 (395)
50 TIGR00902 2A0127 phenyl propri 100.0 1.6E-26 3.5E-31 216.2 28.3 331 43-405 10-347 (382)
51 PRK03893 putative sialic acid 100.0 4E-26 8.7E-31 221.5 31.6 349 35-407 14-422 (496)
52 PRK11652 emrD multidrug resist 100.0 7E-26 1.5E-30 213.1 32.2 327 52-406 23-353 (394)
53 TIGR00886 2A0108 nitrite extru 100.0 1.6E-26 3.4E-31 215.5 27.1 326 53-399 17-365 (366)
54 TIGR00881 2A0104 phosphoglycer 100.0 4.3E-27 9.2E-32 220.1 23.2 329 55-407 13-366 (379)
55 PRK03633 putative MFS family t 100.0 8.4E-26 1.8E-30 211.5 28.7 319 48-407 17-341 (381)
56 PRK10473 multidrug efflux syst 100.0 2.7E-25 5.8E-30 209.1 31.9 324 52-406 18-346 (392)
57 TIGR00887 2A0109 phosphate:H+ 100.0 1.7E-25 3.8E-30 216.6 30.2 359 31-408 6-449 (502)
58 TIGR00894 2A0114euk Na(+)-depe 99.9 5.4E-26 1.2E-30 218.5 25.7 323 66-409 70-418 (465)
59 TIGR00896 CynX cyanate transpo 99.9 8.2E-26 1.8E-30 209.6 25.7 317 56-406 19-341 (355)
60 TIGR00898 2A0119 cation transp 99.9 2.5E-26 5.4E-31 223.3 23.2 319 58-408 110-467 (505)
61 TIGR00901 2A0125 AmpG-related 99.9 2.7E-25 5.8E-30 206.3 28.7 324 55-397 6-355 (356)
62 PRK15034 nitrate/nitrite trans 99.9 3.1E-25 6.7E-30 206.7 28.5 333 48-406 44-421 (462)
63 TIGR00883 2A0106 metabolite-pr 99.9 2.5E-25 5.3E-30 209.3 28.3 324 58-405 14-367 (394)
64 TIGR00885 fucP L-fucose:H+ sym 99.9 5.6E-25 1.2E-29 206.8 29.6 313 48-390 14-360 (410)
65 TIGR00879 SP MFS transporter, 99.9 2.6E-25 5.7E-30 214.6 27.9 333 57-408 48-440 (481)
66 PRK11128 putative 3-phenylprop 99.9 3.8E-25 8.3E-30 207.1 27.2 323 48-404 15-346 (382)
67 TIGR00712 glpT glycerol-3-phos 99.9 7.9E-25 1.7E-29 208.5 29.1 322 58-405 48-400 (438)
68 KOG1330 Sugar transporter/spin 99.9 5.6E-27 1.2E-31 209.9 10.3 338 39-398 31-396 (493)
69 cd06174 MFS The Major Facilita 99.9 1.2E-24 2.7E-29 201.2 26.1 305 48-408 10-322 (352)
70 TIGR00882 2A0105 oligosacchari 99.9 2.8E-24 6.2E-29 202.3 27.5 336 40-405 5-362 (396)
71 PRK09528 lacY galactoside perm 99.9 2.1E-24 4.6E-29 204.7 26.1 338 39-406 12-371 (420)
72 PF05977 MFS_3: Transmembrane 99.9 8.4E-24 1.8E-28 201.9 30.0 340 40-406 13-362 (524)
73 COG2223 NarK Nitrate/nitrite t 99.9 4.4E-25 9.5E-30 196.4 18.6 333 47-404 23-366 (417)
74 TIGR00889 2A0110 nucleoside tr 99.9 6.8E-24 1.5E-28 200.3 26.4 335 45-406 10-364 (418)
75 TIGR00792 gph sugar (Glycoside 99.9 2.6E-23 5.5E-28 198.6 28.7 329 54-406 16-373 (437)
76 PRK06814 acylglycerophosphoeth 99.9 4.7E-23 1E-27 218.7 31.2 319 72-406 52-389 (1140)
77 PRK11010 ampG muropeptide tran 99.9 2.1E-22 4.5E-27 193.8 32.2 326 50-403 25-368 (491)
78 PRK08633 2-acyl-glycerophospho 99.9 9.6E-23 2.1E-27 217.0 31.9 328 48-403 20-374 (1146)
79 PRK10207 dipeptide/tripeptide 99.9 2.4E-22 5.2E-27 192.4 29.5 337 59-407 37-435 (489)
80 TIGR00924 yjdL_sub1_fam amino 99.9 3.5E-22 7.5E-27 191.3 27.6 344 52-408 25-438 (475)
81 KOG0569 Permease of the major 99.9 9.3E-22 2E-26 182.6 28.5 321 65-404 47-421 (485)
82 KOG2532 Permease of the major 99.9 2.3E-22 4.9E-27 188.9 23.9 318 65-408 66-414 (466)
83 PRK11902 ampG muropeptide tran 99.9 3.6E-21 7.9E-26 181.5 31.8 317 46-390 8-346 (402)
84 COG0738 FucP Fucose permease [ 99.9 4.8E-21 1E-25 169.5 29.5 329 48-406 24-377 (422)
85 TIGR00806 rfc RFC reduced fola 99.9 1.4E-20 3.1E-25 172.3 31.5 330 35-394 22-396 (511)
86 KOG2533 Permease of the major 99.9 9E-22 1.9E-26 185.2 19.8 328 62-415 71-432 (495)
87 KOG3764 Vesicular amine transp 99.9 3.3E-22 7.1E-27 175.7 13.9 309 65-407 99-423 (464)
88 TIGR02718 sider_RhtX_FptX side 99.9 1.4E-19 3E-24 170.1 32.6 330 53-407 17-360 (390)
89 KOG0254 Predicted transporter 99.9 9.7E-21 2.1E-25 183.6 25.1 315 73-403 90-447 (513)
90 KOG2504 Monocarboxylate transp 99.9 6.1E-21 1.3E-25 181.5 23.1 346 35-407 40-444 (509)
91 PRK09584 tppB putative tripept 99.9 6.8E-20 1.5E-24 176.5 30.5 335 57-407 41-438 (500)
92 PF03825 Nuc_H_symport: Nucleo 99.9 4.6E-20 9.9E-25 171.4 28.3 341 39-405 4-356 (400)
93 PF06609 TRI12: Fungal trichot 99.9 5.4E-20 1.2E-24 175.3 27.3 326 57-407 64-461 (599)
94 TIGR00805 oat sodium-independe 99.9 2.6E-21 5.7E-26 190.4 16.7 265 54-329 50-415 (633)
95 KOG0253 Synaptic vesicle trans 99.9 3E-20 6.5E-25 161.5 20.8 340 35-406 72-489 (528)
96 COG2807 CynX Cyanate permease 99.9 5.6E-19 1.2E-23 154.2 27.5 320 56-408 31-354 (395)
97 PRK09669 putative symporter Ya 99.9 9.4E-19 2E-23 167.2 30.6 329 57-405 29-380 (444)
98 KOG0252 Inorganic phosphate tr 99.8 1.9E-21 4.1E-26 173.9 5.4 357 38-410 38-465 (538)
99 PF13347 MFS_2: MFS/sugar tran 99.8 3.9E-19 8.4E-24 169.0 21.6 326 58-405 22-376 (428)
100 TIGR01301 GPH_sucrose GPH fami 99.8 3.6E-17 7.9E-22 153.9 33.5 346 50-398 17-429 (477)
101 KOG0255 Synaptic vesicle trans 99.8 1.3E-18 2.8E-23 169.7 24.3 313 64-407 110-462 (521)
102 PRK10429 melibiose:sodium symp 99.8 5.3E-18 1.2E-22 163.0 28.2 333 52-405 21-385 (473)
103 PRK09848 glucuronide transport 99.8 1.8E-17 3.8E-22 158.6 30.3 329 54-406 25-381 (448)
104 PRK15462 dipeptide/tripeptide 99.8 1.6E-17 3.4E-22 157.1 28.6 334 57-405 29-432 (493)
105 PTZ00207 hypothetical protein; 99.8 1E-17 2.2E-22 160.9 27.7 166 37-216 24-202 (591)
106 KOG2615 Permease of the major 99.8 6.2E-18 1.4E-22 148.1 21.7 313 69-407 65-408 (451)
107 TIGR00788 fbt folate/biopterin 99.8 1.5E-17 3.3E-22 158.9 23.4 328 58-405 47-405 (468)
108 PF00083 Sugar_tr: Sugar (and 99.8 3.4E-23 7.3E-28 198.5 -18.3 314 73-407 47-405 (451)
109 PF01306 LacY_symp: LacY proto 99.8 5.9E-17 1.3E-21 148.0 22.4 330 44-402 14-364 (412)
110 PF11700 ATG22: Vacuole efflux 99.8 4.5E-15 9.8E-20 140.7 32.5 323 74-408 72-437 (477)
111 PRK11462 putative transporter; 99.8 3.2E-15 7E-20 142.8 31.2 325 55-404 27-378 (460)
112 COG2211 MelB Na+/melibiose sym 99.7 3.8E-15 8.2E-20 137.5 28.1 332 52-404 27-387 (467)
113 KOG2563 Permease of the major 99.7 2.5E-14 5.3E-19 128.8 25.3 351 35-408 39-416 (480)
114 COG3104 PTR2 Dipeptide/tripept 99.7 2.9E-14 6.3E-19 130.6 23.9 340 54-406 39-449 (498)
115 TIGR01272 gluP glucose/galacto 99.7 9.1E-15 2E-19 132.2 20.6 260 119-407 5-284 (310)
116 COG2270 Permeases of the major 99.6 2.2E-13 4.7E-18 122.2 25.2 316 72-407 58-397 (438)
117 TIGR00889 2A0110 nucleoside tr 99.6 2.2E-13 4.7E-18 128.9 21.4 165 57-226 228-409 (418)
118 KOG4686 Predicted sugar transp 99.6 1E-14 2.2E-19 123.0 10.4 321 62-407 69-408 (459)
119 KOG2325 Predicted transporter/ 99.5 2.3E-12 5E-17 119.5 21.3 364 35-406 28-443 (488)
120 PF03209 PUCC: PUCC protein; 99.5 5.5E-11 1.2E-15 107.2 28.3 313 62-403 5-353 (403)
121 PRK15011 sugar efflux transpor 99.5 7.3E-12 1.6E-16 117.8 21.4 153 57-221 236-392 (393)
122 PRK09528 lacY galactoside perm 99.4 2.1E-12 4.6E-17 122.7 15.7 149 65-221 255-405 (420)
123 PRK05122 major facilitator sup 99.4 2E-11 4.3E-16 115.2 20.9 150 57-216 236-386 (399)
124 TIGR00899 2A0120 sugar efflux 99.4 2.4E-11 5.1E-16 113.7 21.0 150 58-216 220-371 (375)
125 TIGR00902 2A0127 phenyl propri 99.4 3.7E-11 8.1E-16 112.6 22.2 155 52-215 220-375 (382)
126 KOG2816 Predicted transporter 99.4 1.6E-10 3.5E-15 108.7 25.0 295 82-407 72-386 (463)
127 TIGR00890 2A0111 Oxalate/Forma 99.4 2E-11 4.4E-16 114.0 18.4 147 58-212 226-375 (377)
128 PRK10489 enterobactin exporter 99.4 8.3E-11 1.8E-15 111.7 22.3 161 57-225 243-405 (417)
129 PRK03633 putative MFS family t 99.4 1.3E-10 2.9E-15 108.9 23.1 149 57-216 220-369 (381)
130 PRK09874 drug efflux system pr 99.4 4.1E-11 8.9E-16 113.4 19.3 154 56-220 238-399 (408)
131 PRK03699 putative transporter; 99.4 6.6E-11 1.4E-15 111.4 19.6 151 57-216 225-377 (394)
132 PRK10642 proline/glycine betai 99.4 6.6E-11 1.4E-15 114.6 20.1 161 57-225 270-435 (490)
133 TIGR00880 2_A_01_02 Multidrug 99.4 5.8E-12 1.3E-16 99.9 10.6 135 79-221 5-140 (141)
134 PRK11128 putative 3-phenylprop 99.4 1.5E-10 3.2E-15 108.5 21.7 149 57-214 225-374 (382)
135 PF01770 Folate_carrier: Reduc 99.4 3.1E-09 6.6E-14 97.2 28.9 319 58-400 24-389 (412)
136 PRK03545 putative arabinose tr 99.3 1.8E-10 3.9E-15 108.3 21.5 152 58-219 226-380 (390)
137 PRK09705 cynX putative cyanate 99.3 2.7E-10 5.8E-15 107.2 22.3 161 57-225 225-387 (393)
138 PRK12382 putative transporter; 99.3 1.5E-10 3.3E-15 108.9 20.4 150 57-216 236-386 (392)
139 PRK11551 putative 3-hydroxyphe 99.3 1.9E-10 4E-15 108.9 20.6 153 57-216 240-393 (406)
140 cd06174 MFS The Major Facilita 99.3 4.3E-10 9.3E-15 103.8 19.5 154 55-216 193-349 (352)
141 PRK09952 shikimate transporter 99.3 5.9E-10 1.3E-14 106.4 20.4 159 57-221 270-434 (438)
142 TIGR01299 synapt_SV2 synaptic 99.3 2.9E-10 6.4E-15 113.2 18.3 139 77-225 600-739 (742)
143 PRK11010 ampG muropeptide tran 99.3 2.9E-09 6.3E-14 102.9 24.7 147 62-216 248-400 (491)
144 PF03092 BT1: BT1 family; Int 99.3 1.6E-09 3.5E-14 102.6 22.3 332 57-406 10-373 (433)
145 TIGR02718 sider_RhtX_FptX side 99.2 1.1E-09 2.3E-14 103.1 20.2 160 48-214 219-386 (390)
146 TIGR00897 2A0118 polyol permea 99.2 1.7E-09 3.6E-14 102.2 21.2 150 57-216 242-398 (402)
147 PRK09556 uhpT sugar phosphate 99.2 4E-10 8.7E-15 108.5 17.1 153 57-216 278-446 (467)
148 COG2814 AraJ Arabinose efflux 99.2 2.9E-09 6.3E-14 96.8 20.0 149 60-218 235-385 (394)
149 TIGR00892 2A0113 monocarboxyla 99.2 8.5E-10 1.8E-14 105.7 17.3 151 57-214 261-416 (455)
150 TIGR00883 2A0106 metabolite-pr 99.2 5.2E-10 1.1E-14 105.1 15.3 143 57-209 239-391 (394)
151 TIGR00882 2A0105 oligosacchari 99.2 1.2E-09 2.7E-14 102.9 17.7 140 68-215 250-391 (396)
152 PF05977 MFS_3: Transmembrane 99.2 5.6E-09 1.2E-13 100.5 21.4 149 57-216 238-391 (524)
153 PRK10091 MFS transport protein 99.2 7.8E-09 1.7E-13 96.9 21.9 146 62-216 225-373 (382)
154 PRK10504 putative transporter; 99.1 4.2E-09 9E-14 101.7 19.3 96 57-153 281-381 (471)
155 PF03137 OATP: Organic Anion T 99.1 5.1E-12 1.1E-16 121.8 -1.1 351 53-410 19-511 (539)
156 PRK11273 glpT sn-glycerol-3-ph 99.1 6.3E-09 1.4E-13 99.8 19.9 153 57-216 273-432 (452)
157 TIGR00792 gph sugar (Glycoside 99.1 2.5E-09 5.4E-14 102.2 16.8 122 70-193 255-381 (437)
158 PF11700 ATG22: Vacuole efflux 99.1 1.4E-08 3E-13 96.8 21.2 155 64-226 309-474 (477)
159 KOG3626 Organic anion transpor 99.1 1.6E-09 3.5E-14 105.0 15.0 282 42-327 98-475 (735)
160 TIGR00900 2A0121 H+ Antiporter 99.1 8.2E-09 1.8E-13 95.9 19.4 130 58-193 232-364 (365)
161 PRK11902 ampG muropeptide tran 99.1 1.3E-08 2.9E-13 96.0 20.5 143 62-216 235-387 (402)
162 PF01306 LacY_symp: LacY proto 99.1 4.8E-09 1E-13 96.5 16.3 149 69-224 256-405 (412)
163 COG2271 UhpC Sugar phosphate p 99.1 9.5E-09 2.1E-13 92.7 17.6 155 62-223 278-438 (448)
164 PRK15402 multidrug efflux syst 99.1 2.1E-08 4.6E-13 94.9 21.2 142 59-211 237-387 (406)
165 PRK10054 putative transporter; 99.1 8.1E-09 1.8E-13 97.2 18.2 148 65-221 237-386 (395)
166 PF06963 FPN1: Ferroportin1 (F 99.1 6.1E-07 1.3E-11 83.7 30.0 351 38-401 3-406 (432)
167 PRK15075 citrate-proton sympor 99.1 1.2E-08 2.6E-13 97.4 19.5 132 57-198 258-398 (434)
168 PRK10077 xylE D-xylose transpo 99.1 8.2E-09 1.8E-13 99.9 18.4 161 58-225 292-463 (479)
169 TIGR00879 SP MFS transporter, 99.1 4E-09 8.7E-14 101.8 16.0 159 57-224 304-475 (481)
170 PRK11663 regulatory protein Uh 99.1 2.9E-08 6.2E-13 94.8 21.5 159 57-223 263-428 (434)
171 PRK10213 nepI ribonucleoside t 99.1 3.3E-08 7.1E-13 93.0 21.6 143 61-215 241-387 (394)
172 PRK10406 alpha-ketoglutarate t 99.1 2.2E-08 4.7E-13 95.5 20.2 153 57-216 263-421 (432)
173 PRK10473 multidrug efflux syst 99.1 2.8E-08 6.1E-13 93.5 20.6 81 63-143 230-311 (392)
174 PRK03893 putative sialic acid 99.0 6.9E-09 1.5E-13 100.9 16.7 142 58-207 296-441 (496)
175 TIGR00896 CynX cyanate transpo 99.0 2.1E-08 4.5E-13 93.1 19.1 131 57-193 217-349 (355)
176 TIGR00893 2A0114 d-galactonate 99.0 1.4E-08 3.1E-13 95.3 18.2 151 57-216 235-396 (399)
177 TIGR00891 2A0112 putative sial 99.0 8.4E-09 1.8E-13 97.4 16.2 138 58-203 259-400 (405)
178 COG2223 NarK Nitrate/nitrite t 99.0 1.9E-08 4.2E-13 90.8 16.8 148 57-216 238-398 (417)
179 PF03825 Nuc_H_symport: Nucleo 99.0 7.6E-08 1.6E-12 90.0 21.6 167 48-221 218-397 (400)
180 PLN00028 nitrate transmembrane 99.0 1.2E-08 2.7E-13 98.3 15.9 149 58-216 273-430 (476)
181 PRK09848 glucuronide transport 99.0 2.9E-08 6.2E-13 95.2 17.6 88 65-153 257-347 (448)
182 TIGR01272 gluP glucose/galacto 99.0 8.5E-08 1.8E-12 86.9 19.2 129 66-207 172-303 (310)
183 PRK12307 putative sialic acid 99.0 4.1E-08 8.8E-13 93.6 17.7 136 57-200 251-389 (426)
184 TIGR00710 efflux_Bcr_CflA drug 98.9 1.2E-07 2.6E-12 88.9 20.3 121 58-186 227-356 (385)
185 TIGR00712 glpT glycerol-3-phos 98.9 6.3E-08 1.4E-12 92.6 18.2 157 57-223 271-437 (438)
186 TIGR00924 yjdL_sub1_fam amino 98.9 8.5E-09 1.8E-13 99.2 12.1 147 244-407 6-161 (475)
187 KOG3098 Uncharacterized conser 98.9 3.3E-07 7.1E-12 85.4 21.8 323 78-405 56-406 (461)
188 PRK11646 multidrug resistance 98.9 6.4E-08 1.4E-12 91.3 17.5 150 58-216 229-385 (400)
189 PRK09669 putative symporter Ya 98.9 5.8E-08 1.3E-12 93.0 17.2 80 73-153 265-347 (444)
190 PRK11102 bicyclomycin/multidru 98.9 2.3E-07 4.9E-12 86.8 20.5 117 63-187 221-344 (377)
191 PRK15034 nitrate/nitrite trans 98.9 1.9E-07 4.2E-12 88.0 19.4 159 57-219 272-454 (462)
192 PRK11195 lysophospholipid tran 98.9 3.2E-07 7E-12 86.3 20.9 145 62-215 231-376 (393)
193 COG2807 CynX Cyanate permease 98.9 2.4E-07 5.3E-12 82.1 18.3 161 48-216 219-382 (395)
194 TIGR00898 2A0119 cation transp 98.9 1.5E-07 3.2E-12 91.9 18.9 148 65-226 351-501 (505)
195 PRK10133 L-fucose transporter; 98.9 1.9E-07 4.1E-12 89.0 19.1 137 65-214 288-428 (438)
196 PRK14995 methyl viologen resis 98.9 2.7E-07 5.8E-12 89.6 20.5 117 58-175 280-404 (495)
197 TIGR00901 2A0125 AmpG-related 98.9 6.9E-08 1.5E-12 89.6 15.2 96 57-153 229-337 (356)
198 KOG2504 Monocarboxylate transp 98.9 6E-08 1.3E-12 93.0 15.0 153 57-216 318-473 (509)
199 PRK11043 putative transporter; 98.8 5.2E-07 1.1E-11 85.2 20.8 95 58-153 224-324 (401)
200 PRK15462 dipeptide/tripeptide 98.8 4.1E-08 8.8E-13 93.5 13.0 138 254-407 15-158 (493)
201 PRK10429 melibiose:sodium symp 98.8 1.9E-07 4.1E-12 90.1 17.0 89 64-153 258-352 (473)
202 PF13347 MFS_2: MFS/sugar tran 98.8 9.2E-08 2E-12 91.1 14.6 130 52-183 240-379 (428)
203 TIGR00895 2A0115 benzoate tran 98.8 2.5E-07 5.5E-12 87.0 17.4 127 57-189 270-397 (398)
204 TIGR00711 efflux_EmrB drug res 98.8 4.8E-07 1E-11 87.7 18.7 129 57-191 275-409 (485)
205 PF06813 Nodulin-like: Nodulin 98.8 3.4E-07 7.5E-12 78.9 15.1 131 39-170 1-143 (250)
206 TIGR00894 2A0114euk Na(+)-depe 98.8 4E-07 8.7E-12 87.8 17.1 153 57-216 281-447 (465)
207 KOG0637 Sucrose transporter an 98.8 1.2E-06 2.6E-11 80.0 18.6 101 52-153 47-170 (498)
208 PRK10207 dipeptide/tripeptide 98.7 8.3E-08 1.8E-12 92.5 12.0 146 245-406 11-162 (489)
209 PRK08633 2-acyl-glycerophospho 98.7 4.7E-07 1E-11 97.4 18.9 96 57-153 252-350 (1146)
210 TIGR02332 HpaX 4-hydroxyphenyl 98.7 7.5E-08 1.6E-12 91.2 11.0 118 271-406 31-151 (412)
211 TIGR00887 2A0109 phosphate:H+ 98.7 2.2E-07 4.9E-12 90.4 14.4 162 58-226 309-495 (502)
212 PRK11462 putative transporter; 98.7 2E-06 4.4E-11 82.6 20.0 83 70-153 261-346 (460)
213 KOG0569 Permease of the major 98.7 9.8E-07 2.1E-11 83.1 16.2 164 57-228 290-463 (485)
214 TIGR00881 2A0104 phosphoglycer 98.7 7.7E-07 1.7E-11 83.1 15.8 137 57-201 236-379 (379)
215 PRK11652 emrD multidrug resist 98.7 3.1E-06 6.7E-11 79.7 19.9 122 60-190 230-358 (394)
216 PRK06814 acylglycerophosphoeth 98.7 9.1E-07 2E-11 95.0 17.8 104 57-161 245-373 (1140)
217 PF07690 MFS_1: Major Facilita 98.7 1E-06 2.3E-11 81.3 15.9 125 53-183 222-352 (352)
218 TIGR00926 2A1704 Peptide:H+ sy 98.6 1.4E-05 2.9E-10 79.3 24.1 156 57-216 8-179 (654)
219 TIGR00903 2A0129 major facilit 98.6 5.6E-06 1.2E-10 77.0 20.0 146 57-216 212-362 (368)
220 COG2270 Permeases of the major 98.6 8.1E-07 1.8E-11 80.5 13.5 166 49-222 262-431 (438)
221 PRK09584 tppB putative tripept 98.6 5.3E-07 1.1E-11 87.4 12.8 149 243-407 16-170 (500)
222 COG2211 MelB Na+/melibiose sym 98.6 1.8E-06 3.8E-11 80.6 15.4 86 67-153 267-355 (467)
223 KOG3764 Vesicular amine transp 98.6 5.8E-07 1.3E-11 80.6 11.1 210 2-216 227-451 (464)
224 COG0477 ProP Permeases of the 98.6 7.8E-06 1.7E-10 73.6 18.9 154 54-211 19-177 (338)
225 TIGR00880 2_A_01_02 Multidrug 98.6 9.7E-08 2.1E-12 75.3 5.6 102 289-407 6-107 (141)
226 TIGR00769 AAA ADP/ATP carrier 98.6 7.5E-05 1.6E-09 70.8 25.7 267 47-322 13-342 (472)
227 TIGR00886 2A0108 nitrite extru 98.6 6.9E-07 1.5E-11 83.2 12.2 126 261-403 14-142 (366)
228 PF02487 CLN3: CLN3 protein; 98.6 3E-05 6.5E-10 71.3 21.9 304 75-406 62-390 (402)
229 TIGR00885 fucP L-fucose:H+ sym 98.5 1.4E-05 3.1E-10 75.5 19.5 141 57-207 252-400 (410)
230 PF06779 DUF1228: Protein of u 98.5 3.5E-07 7.5E-12 63.7 6.2 77 52-128 7-84 (85)
231 PRK15403 multidrug efflux syst 98.5 3.1E-05 6.8E-10 73.4 20.6 147 58-216 239-394 (413)
232 KOG4686 Predicted sugar transp 98.5 7.1E-06 1.5E-10 70.3 14.0 145 62-216 290-440 (459)
233 PF03209 PUCC: PUCC protein; 98.4 4.7E-05 1E-09 69.4 19.6 172 40-216 211-395 (403)
234 TIGR00788 fbt folate/biopterin 98.4 3.9E-06 8.5E-11 80.7 13.7 123 65-193 281-414 (468)
235 KOG2615 Permease of the major 98.4 1.4E-06 3E-11 77.8 9.0 106 283-406 70-175 (451)
236 PF12832 MFS_1_like: MFS_1 lik 98.4 1.1E-06 2.4E-11 60.8 6.2 65 48-112 11-75 (77)
237 KOG3762 Predicted transporter 98.4 1.8E-06 4E-11 80.3 8.7 162 48-216 382-544 (618)
238 KOG1330 Sugar transporter/spin 98.3 5.4E-07 1.2E-11 82.4 4.8 106 282-404 69-174 (493)
239 TIGR00806 rfc RFC reduced fola 98.3 3.8E-06 8.3E-11 78.4 10.4 108 283-408 64-171 (511)
240 COG0738 FucP Fucose permease [ 98.2 8.1E-05 1.8E-09 67.4 16.1 146 55-212 254-402 (422)
241 KOG0253 Synaptic vesicle trans 98.2 3.4E-06 7.3E-11 75.0 5.8 130 82-225 391-525 (528)
242 KOG3810 Micronutrient transpor 98.1 0.00013 2.8E-09 64.5 14.0 307 65-395 34-370 (433)
243 KOG2532 Permease of the major 98.1 9E-05 1.9E-09 70.6 14.2 155 56-216 277-444 (466)
244 COG3104 PTR2 Dipeptide/tripept 98.1 3.9E-05 8.5E-10 71.4 11.1 149 243-407 16-175 (498)
245 KOG3574 Acetyl-CoA transporter 98.1 0.0019 4.1E-08 58.1 20.9 335 54-400 48-418 (510)
246 TIGR01301 GPH_sucrose GPH fami 98.1 1.5E-05 3.2E-10 75.9 8.5 153 250-405 7-170 (477)
247 TIGR00805 oat sodium-independe 98.1 7.5E-06 1.6E-10 81.5 6.6 123 282-406 69-227 (633)
248 PTZ00207 hypothetical protein; 98.0 3E-05 6.5E-10 75.6 10.5 122 268-402 47-170 (591)
249 KOG0254 Predicted transporter 98.0 1.3E-05 2.8E-10 78.3 7.7 103 284-403 92-194 (513)
250 PF06609 TRI12: Fungal trichot 98.0 5.3E-05 1.2E-09 73.5 10.7 105 272-394 68-173 (599)
251 PF05978 UNC-93: Ion channel r 97.9 0.00056 1.2E-08 54.5 13.4 77 76-153 41-117 (156)
252 KOG0252 Inorganic phosphate tr 97.9 6.7E-05 1.4E-09 69.0 8.9 110 284-403 87-196 (538)
253 KOG0255 Synaptic vesicle trans 97.8 5.6E-05 1.2E-09 74.1 8.2 92 283-391 120-211 (521)
254 PF00854 PTR2: POT family; In 97.7 0.0011 2.4E-08 61.9 14.3 108 103-216 2-120 (372)
255 PF00083 Sugar_tr: Sugar (and 97.6 3.6E-06 7.8E-11 80.9 -4.6 109 284-406 49-157 (451)
256 TIGR00939 2a57 Equilibrative N 97.6 0.017 3.6E-07 54.9 19.9 117 285-406 311-427 (437)
257 KOG1237 H+/oligopeptide sympor 97.5 0.012 2.6E-07 57.6 19.2 346 57-407 58-514 (571)
258 KOG3762 Predicted transporter 97.5 0.00082 1.8E-08 63.2 9.8 148 242-407 366-520 (618)
259 KOG2533 Permease of the major 97.4 0.0026 5.6E-08 61.1 12.4 111 282-409 82-192 (495)
260 PF03219 TLC: TLC ATP/ADP tran 97.4 0.14 3.1E-06 49.2 26.6 84 234-319 267-355 (491)
261 KOG1479 Nucleoside transporter 97.4 0.011 2.5E-07 54.3 15.8 106 290-405 292-397 (406)
262 KOG2325 Predicted transporter/ 97.0 0.002 4.3E-08 60.8 7.1 111 283-405 73-183 (488)
263 PF13000 Acatn: Acetyl-coenzym 97.0 0.31 6.7E-06 46.2 20.8 50 353-402 407-456 (544)
264 KOG3097 Predicted membrane pro 96.8 0.098 2.1E-06 46.5 15.0 70 83-153 69-138 (390)
265 KOG2816 Predicted transporter 96.7 0.06 1.3E-06 51.4 14.2 98 62-161 267-369 (463)
266 PF06813 Nodulin-like: Nodulin 96.6 0.013 2.9E-07 50.8 8.8 124 267-403 21-147 (250)
267 PF05978 UNC-93: Ion channel r 96.5 0.09 1.9E-06 42.0 12.4 100 288-405 44-143 (156)
268 COG3202 ATP/ADP translocase [E 96.5 0.83 1.8E-05 43.3 24.3 86 35-120 21-111 (509)
269 KOG0637 Sucrose transporter an 96.4 0.0019 4E-08 59.7 2.5 142 263-406 47-198 (498)
270 PF12832 MFS_1_like: MFS_1 lik 96.4 0.014 3E-07 40.4 6.2 54 266-321 18-73 (77)
271 PF07672 MFS_Mycoplasma: Mycop 96.2 0.059 1.3E-06 46.4 9.8 64 196-259 39-106 (267)
272 KOG2563 Permease of the major 96.1 0.021 4.5E-07 53.0 7.5 89 64-153 293-387 (480)
273 PRK03612 spermidine synthase; 95.9 0.78 1.7E-05 44.8 17.4 42 57-98 35-76 (521)
274 PF05631 DUF791: Protein of un 95.6 0.26 5.7E-06 44.7 11.8 90 283-390 71-165 (354)
275 PF03092 BT1: BT1 family; Int 95.4 0.14 3E-06 48.9 10.4 149 69-224 252-417 (433)
276 KOG3880 Predicted small molecu 95.1 0.68 1.5E-05 41.0 12.4 300 74-406 64-397 (409)
277 COG0477 ProP Permeases of the 94.7 0.14 3E-06 45.6 7.9 106 283-403 41-148 (338)
278 KOG3574 Acetyl-CoA transporter 93.2 0.64 1.4E-05 42.6 8.7 164 245-416 28-198 (510)
279 TIGR00926 2A1704 Peptide:H+ sy 91.7 0.53 1.2E-05 47.3 7.2 113 286-407 28-144 (654)
280 PF03137 OATP: Organic Anion T 90.4 0.059 1.3E-06 52.8 -0.9 122 282-405 39-195 (539)
281 TIGR00769 AAA ADP/ATP carrier 89.4 6.9 0.00015 37.7 12.0 112 294-407 57-185 (472)
282 PF06779 DUF1228: Protein of u 89.1 1.9 4.2E-05 30.2 6.0 63 270-334 14-78 (85)
283 KOG2601 Iron transporter [Inor 88.8 20 0.00043 33.2 18.6 76 36-111 26-102 (503)
284 PF06963 FPN1: Ferroportin1 (F 87.1 15 0.00032 35.0 12.5 108 65-173 286-407 (432)
285 PF02487 CLN3: CLN3 protein; 85.9 15 0.00032 34.5 11.7 78 71-153 280-363 (402)
286 COG2119 Predicted membrane pro 85.0 16 0.00036 29.7 9.8 54 62-116 124-178 (190)
287 PF01733 Nucleoside_tran: Nucl 84.8 0.35 7.5E-06 43.8 0.5 117 286-406 187-303 (309)
288 KOG3098 Uncharacterized conser 84.0 2.6 5.6E-05 40.2 5.9 98 288-403 57-154 (461)
289 PF13386 DsbD_2: Cytochrome C 82.9 27 0.00057 29.2 15.8 28 164-191 35-62 (199)
290 KOG3626 Organic anion transpor 80.1 19 0.0004 36.6 10.4 58 57-114 412-473 (735)
291 PRK03612 spermidine synthase; 75.8 22 0.00047 35.0 9.5 51 355-405 114-167 (521)
292 PF01770 Folate_carrier: Reduc 73.5 56 0.0012 30.9 11.1 95 58-153 268-368 (412)
293 PF03219 TLC: TLC ATP/ADP tran 71.7 73 0.0016 31.0 11.8 113 293-407 71-200 (491)
294 PF02990 EMP70: Endomembrane p 70.3 78 0.0017 31.2 11.9 26 286-311 302-327 (521)
295 PF00854 PTR2: POT family; In 69.8 14 0.00031 34.3 6.7 87 314-406 2-91 (372)
296 PRK11469 hypothetical protein; 67.5 58 0.0013 27.0 8.9 27 91-117 154-180 (188)
297 COG3202 ATP/ADP translocase [E 56.7 2E+02 0.0043 28.0 11.6 111 293-405 74-202 (509)
298 PF11947 DUF3464: Protein of u 56.3 34 0.00073 27.1 5.2 33 369-401 112-144 (153)
299 PF13000 Acatn: Acetyl-coenzym 53.0 40 0.00086 32.6 6.1 52 362-413 129-180 (544)
300 PF06808 DctM: DctM-like trans 49.7 1E+02 0.0022 29.4 8.4 33 149-181 121-153 (416)
301 TIGR00939 2a57 Equilibrative N 46.1 2.8E+02 0.006 26.6 11.3 103 76-181 311-427 (437)
302 KOG3810 Micronutrient transpor 42.8 2.8E+02 0.0062 25.8 12.4 78 75-153 274-354 (433)
303 KOG4830 Predicted sugar transp 42.3 46 0.001 29.2 4.4 80 24-103 3-92 (412)
304 PF02694 UPF0060: Uncharacteri 40.7 1.5E+02 0.0032 21.9 6.1 48 282-331 55-102 (107)
305 COG2836 Uncharacterized conser 39.5 2.4E+02 0.0053 24.1 12.4 31 278-308 161-191 (232)
306 COG4262 Predicted spermidine s 39.1 3.2E+02 0.007 25.4 15.0 114 37-151 7-131 (508)
307 TIGR00688 rarD rarD protein. T 36.6 2.8E+02 0.0061 24.0 11.8 46 69-117 94-140 (256)
308 KOG1479 Nucleoside transporter 33.2 4E+02 0.0087 25.2 9.3 34 350-383 116-149 (406)
309 PF09930 DUF2162: Predicted tr 32.6 2.5E+02 0.0054 24.1 7.3 51 63-116 122-172 (224)
310 PRK02237 hypothetical protein; 32.4 2.1E+02 0.0045 21.2 7.8 48 282-331 57-104 (109)
311 PF15061 DUF4538: Domain of un 27.7 1.1E+02 0.0023 19.7 3.2 22 195-216 3-24 (58)
312 COG2119 Predicted membrane pro 27.2 3.6E+02 0.0078 22.3 12.3 29 291-321 144-172 (190)
313 PF06781 UPF0233: Uncharacteri 26.7 1E+02 0.0023 21.7 3.4 6 220-225 2-7 (87)
314 PRK11588 hypothetical protein; 26.1 6.4E+02 0.014 24.8 16.5 38 93-130 137-177 (506)
315 PF06800 Sugar_transport: Suga 25.8 4.7E+02 0.01 23.2 14.5 48 67-117 160-210 (269)
316 PF02694 UPF0060: Uncharacteri 25.8 1.1E+02 0.0023 22.6 3.3 46 72-117 54-99 (107)
317 PF12273 RCR: Chitin synthesis 25.4 61 0.0013 24.9 2.3 18 3-20 2-19 (130)
318 COG0814 SdaC Amino acid permea 25.3 6E+02 0.013 24.2 12.6 31 352-382 195-225 (415)
319 COG4262 Predicted spermidine s 25.2 5.7E+02 0.012 23.9 9.4 29 350-378 104-132 (508)
320 PF03596 Cad: Cadmium resistan 25.0 2.2E+02 0.0047 23.7 5.5 16 89-104 152-167 (191)
321 PF03222 Trp_Tyr_perm: Tryptop 23.4 6.3E+02 0.014 23.8 15.4 29 350-378 184-212 (394)
322 TIGR02123 TRAP_fused TRAP tran 22.9 8.1E+02 0.018 24.9 20.1 26 149-174 234-259 (613)
323 PF06645 SPC12: Microsomal sig 22.6 2.3E+02 0.005 19.4 4.4 26 196-221 33-58 (76)
324 KOG4332 Predicted sugar transp 22.5 5.7E+02 0.012 23.0 12.4 72 74-145 284-365 (454)
325 COG2962 RarD Predicted permeas 22.1 5.8E+02 0.012 22.9 10.6 33 240-273 62-94 (293)
326 COG1971 Predicted membrane pro 21.2 4.8E+02 0.01 21.7 9.1 32 85-116 150-181 (190)
327 PF07672 MFS_Mycoplasma: Mycop 20.3 6.1E+02 0.013 22.4 10.9 95 77-175 146-252 (267)
328 PRK00159 putative septation in 20.1 1.6E+02 0.0035 20.8 3.2 7 220-226 2-8 (87)
329 PRK13629 threonine/serine tran 20.1 7.9E+02 0.017 23.7 15.2 29 352-380 211-239 (443)
No 1
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=100.00 E-value=5.2e-33 Score=243.85 Aligned_cols=334 Identities=63% Similarity=1.062 Sum_probs=292.1
Q ss_pred hhHHHHHHHHHHHHHHHhhcccccccCCcCcCCcchhHHHHHHHHHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHH
Q 014832 4 FFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFG 83 (417)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~ 83 (417)
|++..|.+++++...++..++++++..+++..++.|+..+.+..+...+|++++|++..+++++|+++.|++.++...+.
T Consensus 1 ~~~~~f~~l~~~~~~l~~~~~~~~~~~~~~~f~~Fqr~yl~vY~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~ 80 (354)
T PF05631_consen 1 FYYLVFGVLAAVCAALELSKRTKDRASTNPAFRRFQRKYLLVYLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFA 80 (354)
T ss_pred CchhHHHHHHHHHHHHheecccccccccChHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHH
Confidence 46778889999999999888888777777888999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhccccccccccCchHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHH
Q 014832 84 SSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWL 163 (417)
Q Consensus 84 ~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~ 163 (417)
...+..++.|.++||+|||+..+..++++++++++-..++++.++++|++.|++.+..+..-+.+++.|+++|+.+.++.
T Consensus 81 Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L 160 (354)
T PF05631_consen 81 SSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWL 160 (354)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 99999999999999999999999999999999886667899999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHH
Q 014832 164 SITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAI 243 (417)
Q Consensus 164 ~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (417)
...+......++++-++.++.+++.+.+....|-..||....++..++.+++...|+|+.++..+.++..++.++.++.+
T Consensus 161 ~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i 240 (354)
T PF05631_consen 161 SDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAI 240 (354)
T ss_pred HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHH
Confidence 88888777666888889999999988887633458899999999888888888899999877555555556667788889
Q ss_pred hccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHH
Q 014832 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVS 323 (417)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~ 323 (417)
.+||+++.+.+...++.+..+.+...|.|....++.+.+.|.+++.++++.++|+.+..++..|. .|+++.+.....+.
T Consensus 241 ~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~-~~~e~~l~~v~~~a 319 (354)
T PF05631_consen 241 LSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKS-LRPESLLRYVFAVA 319 (354)
T ss_pred HcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHH
Confidence 99999999999999999999999999999998666678889999999999999999997766653 45557777777777
Q ss_pred HHHHHHHHHHhhccC
Q 014832 324 SVSLLLPIVTSFLVA 338 (417)
Q Consensus 324 ~~~~~~~~~~~~~~~ 338 (417)
++++.++.+......
T Consensus 320 a~~l~~pv~~~~~~~ 334 (354)
T PF05631_consen 320 AVSLAIPVVTHIFGQ 334 (354)
T ss_pred HHHHHHHHHHhhccC
Confidence 777877777755433
No 2
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-34 Score=237.93 Aligned_cols=403 Identities=87% Similarity=1.395 Sum_probs=355.9
Q ss_pred CcchhHHHHHHHHHHHHHHHhhcccccccCCcCcCCcchhHHHHHHHHHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHH
Q 014832 1 MEMFFYLVFGALGAVVAALELSKTNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIA 80 (417)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~ 80 (417)
|..|.+..|.++.+....+|+.+.++|+.+.++.+.+++...+.+..+++.++|+++|++..+++++|....++|.+...
T Consensus 1 MevfyylvFggl~a~vagLELSk~nkdRintsssFnsFknnyllVyslmmAgDWLQgPYvYyLYstYgFgkG~IgqLfia 80 (454)
T KOG4332|consen 1 MEVFYYLVFGGLAAVVAGLELSKCNKDRINTSSSFNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGDIGQLFIA 80 (454)
T ss_pred CeeeehHHHHHHHHHHHHhhhhhcccccccCchhHHHHhhhHHHHHHHHHhhhhhcCceeeeeehhcCccCCccceeeec
Confidence 67899999999999999999999999988888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhccccccccccCchHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchh
Q 014832 81 GFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFE 159 (417)
Q Consensus 81 ~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~ 159 (417)
.+-...+...+.|.++||-|||+.-+.-++.+.++++.-.++++-.++++|++.|++.+..+.+.+.++++|+ ++|++.
T Consensus 81 GfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Fe 160 (454)
T KOG4332|consen 81 GFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFE 160 (454)
T ss_pred ccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCCh
Confidence 9988999999999999999999998888888888877778899999999999999999999999999999999 799999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhH
Q 014832 160 QQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGA 239 (417)
Q Consensus 160 ~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (417)
.++....++-...+|+.+-++++++.+..+.+.++.|.-.+|-..+.+..++..+++..|.|+.++..+.++-..+.+..
T Consensus 161 qqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~ga 240 (454)
T KOG4332|consen 161 QQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKGA 240 (454)
T ss_pred HhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhHh
Confidence 99999999999989999999999999999998876678889998888888888888878999998888777777777778
Q ss_pred HHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHH
Q 014832 240 AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIV 319 (417)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~ 319 (417)
.+.+..++++.++...-.++....+.+...|.|..--+..+.+.|.+++.+.++.++|+-+..++..|-..|.+..+.+.
T Consensus 241 a~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqiv 320 (454)
T KOG4332|consen 241 ARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIV 320 (454)
T ss_pred HHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHH
Confidence 88899999999999999999999999999999998877677788999999999999999999998888666656677777
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHH
Q 014832 320 FVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIF 399 (417)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~ 399 (417)
..+....+.++...... +++. -++...+++++++-.+.|..+|.++-+-.+..|++.|++.+-.+++..|+.
T Consensus 321 f~vs~a~l~Lpilt~~v-------sP~k-es~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnif 392 (454)
T KOG4332|consen 321 FLVSIAALLLPILTSSV-------SPSK-ESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIF 392 (454)
T ss_pred HHHHHHHHHHHHHHhcc-------CCCc-CCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHh
Confidence 77777777666665421 1111 134556788899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCc
Q 014832 400 VCVVLYNVCSSM 411 (417)
Q Consensus 400 ~~~~~~~~~~~~ 411 (417)
..++++..+...
T Consensus 393 vClvLynlh~~~ 404 (454)
T KOG4332|consen 393 VCLVLYNLHVDA 404 (454)
T ss_pred hhhhheeccccc
Confidence 999999865543
No 3
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-31 Score=240.34 Aligned_cols=324 Identities=17% Similarity=0.204 Sum_probs=244.9
Q ss_pred HHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHH
Q 014832 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKI 126 (417)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~ 126 (417)
.....+......+|++.+|+|+|..+.|++.+.|.++..+++|+...+.||+.||++++..+.++.++.+ +++++||+.
T Consensus 24 ~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~ 103 (394)
T COG2814 24 AIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAV 103 (394)
T ss_pred HHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 3344455668999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHH
Q 014832 127 LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDA 203 (417)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~ 203 (417)
++++|++.|+..|..++.. ..+..+. +||++..+..... ..++.++|..++.++-+.+ |||.+|+.
T Consensus 104 Ll~aR~~~g~a~G~f~~i~-~~~a~~lvpp~~~~~Aiaiv~~G--------~tlA~v~GvPLGt~ig~~~--GWR~~F~~ 172 (394)
T COG2814 104 LLLARALAGLAHGVFWSIA-AALAARLVPPGKRGRALALVFTG--------LTLATVLGVPLGTFLGQLF--GWRATFLA 172 (394)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHcCccchhhHHHHHHHH--------HHHHHHHhccHHHHHHHHh--hHHHHHHH
Confidence 9999999999999999988 6788887 5555544433332 3344455555555555556 99999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCC--
Q 014832 204 AACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI-- 281 (417)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (417)
.+.+.++..+..+...|+++.+++++.+ .++..+++|+|+.+...+...+.....+...+ |...++++..+.
T Consensus 173 ia~l~ll~~~~~~~~lP~~~~~~~~~~~-----~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ft-Yi~P~L~~v~g~s~ 246 (394)
T COG2814 173 IAVLALLALLLLWKLLPPSEISGSLPGP-----LRTLLRLLRRPGVLLGLLATFLFMTGHFALYT-YIRPFLESVAGFSV 246 (394)
T ss_pred HHHHHHHHHHHHHHhCCCccCCCCCCcc-----hhHHHHHhcCchHHHHHHHHHHHHcchhhhHH-hHHHHHHHccCCCH
Confidence 9999999998888788811111111111 12234678888888887777666665664444 677777774443
Q ss_pred -ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHH
Q 014832 282 -PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCT 360 (417)
Q Consensus 282 -~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 360 (417)
..+.....++++.++|+.++|++.|| +.| +.+.....+..+..+.+.+... +.+......++
T Consensus 247 ~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~--~~l~~~~~l~a~~~l~l~~~~~--------------~~~~~~~~~~~ 309 (394)
T COG2814 247 SAVSLVLLAFGIAGFIGNLLGGRLADR-GPR--RALIAALLLLALALLALTFTGA--------------SPALALALLFL 309 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhccc-cch--hHHHHHHHHHHHHHHHHHHhcc--------------hHHHHHHHHHH
Confidence 34777789999999999999999999 555 6777776777666666555552 44566666666
Q ss_pred HHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 361 FEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
+++..............+ .-+|.+..+.+++...+|+++..|-..
T Consensus 310 wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~l 354 (394)
T COG2814 310 WGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAAL 354 (394)
T ss_pred HHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 777776666666666676 335668999999999999987776543
No 4
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=4.4e-31 Score=244.11 Aligned_cols=325 Identities=13% Similarity=0.045 Sum_probs=220.7
Q ss_pred hhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHH
Q 014832 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRI 132 (417)
Q Consensus 54 ~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~ 132 (417)
....|.+|.+.+|+|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.. ....++++.+++.|+
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~ 87 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQL 87 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 3447899999999999999999999999999999999999999999999987766555555544 444479999999999
Q ss_pred HHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHH
Q 014832 133 LGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (417)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~ 212 (417)
++|++.+.. +.. ...++|+ .+.+.+....++... +..+|..+++.++..+.+.+ |||+.|++.+++.++..
T Consensus 88 l~G~g~~~~-~~~-~~~~~~~----~~~~~r~~a~~~~~~-~~~lG~~l~~~~~~~l~~~~--gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 88 LAALGQPFL-LNA-FAPAASQ----IREERRDLVISLLSF-AMYLGIIFALAAGLKIYTAG--GLQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHhHhHHH-HHH-HHHHHHH----cCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcc--chHHHHHHHHHHHHHHH
Confidence 999999865 433 3345676 222222223333333 36677777777777777777 99999999888877776
Q ss_pred HHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCCChhHHHHHHH
Q 014832 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEIPHGFIFATFM 291 (417)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 291 (417)
++.+...||+++++++..+. ++..+++++++|+|.++.+.+...+.....+ ...+|.|.|+++ +.+.+.+.......
T Consensus 159 ~~~~~~lp~~p~~~~~~~~~-~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~-~~~~wlp~~L~~~g~s~~~~~~~~l~~ 236 (368)
T TIGR00903 159 ILVLAALPALPFQAAEGFGF-KDAVKEFGALAGRKDLWIIGAILGFGVALFD-NLAIWLEAALRPAGLEDIAGDAVALAI 236 (368)
T ss_pred HHHHHHcCCCCCCCCCCcch-HHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCChHHHHHHHHHH
Confidence 66666778765433221111 1222457889999999888877766555555 556799999976 33322233333333
Q ss_pred HHHHHHHHHHHHHHhhcCCCccchH-HH-HHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccc
Q 014832 292 LASMLGSSLASRLMARSPPRVESYM-QI-VFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (417)
Q Consensus 292 ~~~~~~~~~~g~l~dr~g~~~~~~l-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 369 (417)
..+.+..++++||..||.+|.. .. ...+.++.+....... +....+....+.+++....+
T Consensus 237 ---~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~---------------~~~~~~~~~~l~~~~~~~~~ 298 (368)
T TIGR00903 237 ---LAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFEL---------------NRLALFAFIGIAGLLMLPAY 298 (368)
T ss_pred ---HHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcc---------------ccHHHHHHHHHHHHhhhhhH
Confidence 3344445788888766532222 22 2222222222222111 22333445555666676677
Q ss_pred hhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 370 PSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+..+++.+|.+|++.|+++.|+.+...++++..+....
T Consensus 299 ~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~ 336 (368)
T TIGR00903 299 AIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAA 336 (368)
T ss_pred HHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHH
Confidence 88889999999999999999999998888886666543
No 5
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3e-30 Score=245.30 Aligned_cols=334 Identities=13% Similarity=0.156 Sum_probs=209.5
Q ss_pred hhHHHHHHHHHHHHhhhh----hhhHHHHHHhcC---CCcchH---HHHHHHHHHHHhhhhccccccccccCchHHHHHH
Q 014832 39 KNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYG---FGKGEI---GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTY 108 (417)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g---~s~~~~---g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 108 (417)
++..+....+..+.+.++ ....|.+.+|++ .++.+. +.+.+..+++..+++++.|+++||+||||++..+
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~ 99 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 333444444555566655 455557778874 455543 3455566677779999999999999999999999
Q ss_pred HHHHHHHHH-HhcCchHH--------HHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHH
Q 014832 109 CLTYILSCI-TKHSPQYK--------ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNG 176 (417)
Q Consensus 109 ~~~~~~~~~-~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~ 176 (417)
.++++++++ +++++++. .+++.|+++|++.|..++.. .++++|+ ++|++..... ..+...|..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~-~~~i~e~~p~~~rg~~~~~~----~~~~~~G~~ 174 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTS-ATYMSEVAVEGRKGFYASFQ----YVTLIGGQL 174 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhH-HHHHHHhCCCCcccHHHHHH----HHHHHHHHH
Confidence 999999999 99998864 58999999999999999988 6799998 4455433222 223333333
Q ss_pred HHHHHHhhhhhhh----hhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHH
Q 014832 177 LVAILSGLFGNLL----VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALL 252 (417)
Q Consensus 177 ~g~~l~~~~~~~~----~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (417)
++..+...+...+ .+.+ |||++|++.+++.++...+ ....||+++.+++ .++.+.++++++|+++.+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~--gWr~~F~i~~~~~ll~~~~-~~~~~e~~~~~~~----~~~~~~~~~~l~~~~~~~~~ 247 (432)
T PRK10406 175 LALLVVVVLQQTLEDAELREW--GWRIPFALGAVLAVVALWL-RRQLDETSQQETR----ALKEAGSLKGLWRNRRAFIM 247 (432)
T ss_pred HHHHHHHHHHHhCCHHHHhcc--chHHHHHHHHHHHHHHHHH-HhcCCCCchHHHh----hhcccccHHHHHhhHHHHHH
Confidence 3333333333221 1234 9999999988777665433 2244554322111 11112357778888887766
Q ss_pred HHHHHHHHhHHHHHHHhhhccccCCCCCCCh---hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHH
Q 014832 253 GAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLL 329 (417)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~ 329 (417)
.+...+.....++....|.|.|+++..+.+. +.......+...++.++.|+++||++|| +.+.....+..+....
T Consensus 248 ~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr--~~~~~~~~~~~~~~~~ 325 (432)
T PRK10406 248 VLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR--TSMLCFGSLAALFTVP 325 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch--HHHHHHHHHHHHHHHH
Confidence 6555444344444566689999876444433 4445565667788888999999999988 6655544433322221
Q ss_pred HHH-HhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhH
Q 014832 330 PIV-TSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNI 398 (417)
Q Consensus 330 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~ 398 (417)
... .... . +....+....+..+..+...+....+.+|.+|++.|++++|+.+...+.
T Consensus 326 ~~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~ 383 (432)
T PRK10406 326 ILSALQNV-S-----------SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANA 383 (432)
T ss_pred HHHHHHcC-C-----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHH
Confidence 111 1100 0 1122222222233333334456778899999999999999997655443
No 6
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=4.3e-30 Score=239.21 Aligned_cols=342 Identities=15% Similarity=0.092 Sum_probs=248.0
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hhc
Q 014832 42 YLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKH 120 (417)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~ 120 (417)
++...++..+..+...+.+|.+.+|++.++.+.|++.++..++..+++++.|+++||+||||++..+.++..++.+ ..+
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 3344455666667777888888889999999999999999999999999999999999999999999988888877 777
Q ss_pred Cc-----hHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccC
Q 014832 121 SP-----QYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (417)
Q Consensus 121 ~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~ 195 (417)
.+ +++.+++.|++.|++.+...+.. .+++.|+.++. .+....+..... ..+|..+++.+++.+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~-~~~g~~~g~~l~~~l~~~~-- 155 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAY-QAMLPDLVPEE----QLTQANSLSQAV-RSLFYIVGPGIGGLMYATL-- 155 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCHH----HHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHh--
Confidence 66 99999999999999999988887 67888882111 122223333332 5566677777777777777
Q ss_pred CCchhHHHHHHHHHHHHHHHHh-hccccCCCCCCc-h-hHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhc
Q 014832 196 GPVAPFDAAACFLAIGMVIILS-SWTENYGDPSES-K-DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (417)
Q Consensus 196 gw~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (417)
+||+.|++.++..++..+.... ..||++++++++ + +..++.++..++++|+|.++.......+...........+.|
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (365)
T TIGR00900 156 GIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFP 235 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999887766665554442 223322212111 1 223344556778888888877666555544444433335678
Q ss_pred cccCCCCCC---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccc
Q 014832 273 ALSPNDEEI---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISF 349 (417)
Q Consensus 273 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (417)
.+.++..+. +.+.......++.+++.++.+++.||.+++ +.+..+..+..++.........
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-------------- 299 (365)
T TIGR00900 236 YVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM--ALMTGAIFVIGLAILVVGLTPP-------------- 299 (365)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh--HHHHHHHHHHHHHHHHHHhhch--------------
Confidence 887763332 346667778888999999999999999877 6666555555554444433330
Q ss_pred chhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 350 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+.+...+..++.+++.+...+...++..|.+|+++|+++.|+.+...+++..++....
T Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~ 357 (365)
T TIGR00900 300 NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILA 357 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1456677788889999988899999999999999999999999998888888776654
No 7
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.98 E-value=1.3e-30 Score=243.83 Aligned_cols=324 Identities=13% Similarity=0.017 Sum_probs=227.9
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
.++.|.+.+|+|+|+++.|++.+++.++..+++++.|+++||+|||+++..+..+.+++.+ ++++++++.+++.|++.|
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 102 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLAS 102 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6888999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHhhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~ 213 (417)
++.+..++.. ...+.|+ ++|++..+. . ..+..+|..+++.+.+.+.+.. +||+.|++.++..++..+
T Consensus 103 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~-~~~~~~g~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 103 AGVGIAYGIA-LNTAVKWFPDKRGLASGI-------I-IGGYGLGSFILSPLITSVINLE--GVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHhH-HHHHHHHcCcccHHHHHH-------H-HHhcchhHhHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHH
Confidence 9999877766 4466665 444432222 1 2224445455444555555555 999999999888777666
Q ss_pred HHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCC-ChhHHHHHHH
Q 014832 214 IILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEI-PHGFIFATFM 291 (417)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~ 291 (417)
......+++++++++++++.++.+.+.++.+|+++.+.............. ....+.+.+.++ +.+. +.+.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (377)
T TIGR00890 172 LGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGL-LLIGLYKPYGQSLGLSDGFLVLAVSISS 250 (377)
T ss_pred HHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHH-HHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 555344433322111111111112345677888887766554443333322 222345555544 2222 2355667778
Q ss_pred HHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchh
Q 014832 292 LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPS 371 (417)
Q Consensus 292 ~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 371 (417)
++.+++++..+++.||++|| +.+..+.....++.......+.. +.........+.+++.+...+.
T Consensus 251 ~~~~~~~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~g~~~g~~~~~ 315 (377)
T TIGR00890 251 IFNGGGRPFLGALSDKIGRQ--KTMSIVFGISAVGMAAMLFIPML-------------NDVLFLATVALVFFTWGGTISL 315 (377)
T ss_pred HHHHHHHHHHHHHHHHHhhh--hhhhHHHHHHHHHHHHHHHcccc-------------hhHHHHHHHHHHHHHhccchhc
Confidence 88999999999999999988 77766666666655444333210 1123334456667777777777
Q ss_pred HHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 372 IMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 372 ~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
...+..|.+|+++|+++.|+.+...+++..++....
T Consensus 316 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~ 351 (377)
T TIGR00890 316 FPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIA 351 (377)
T ss_pred cHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999998999888887643
No 8
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.98 E-value=1.1e-29 Score=239.60 Aligned_cols=343 Identities=14% Similarity=0.100 Sum_probs=229.3
Q ss_pred cchhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHH
Q 014832 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (417)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 112 (417)
|.+|......++....+.++ ....|.+.+|+|+|+++.|++.+++.+++.+++++.|+++||+|||+++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 44566666666665555554 56677888999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 014832 113 ILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (417)
Q Consensus 113 ~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~ 188 (417)
+++.+ +++++|++.+++.|++.|++.+...+.. ..++.|+ ++|++.. +... .+..+|..+++.+++.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~-~~~~~~~~~~~~rg~~~-------~~~~-~~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGI-LLYLTFWFPAYFRARAN-------ALFM-IAMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHcCHHHHHHHH-------HHHH-HHHHHHHHHHHHHHHH
Confidence 99999 9999999999999999999999988877 5678888 2344322 2222 2244555666666655
Q ss_pred hhh------hccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCC---C-chhHH-HH---------------------H
Q 014832 189 LVD------SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS---E-SKDLL-TQ---------------------F 236 (417)
Q Consensus 189 ~~~------~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~-~~---------------------~ 236 (417)
+.+ .. |||+.|++.++..++..++.+...||++++.+ + +++.. +. .
T Consensus 155 l~~~~~~~~~~--gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (412)
T TIGR02332 155 ILALDGLMALK--GWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQ 232 (412)
T ss_pred HHhCCCCCCcc--chhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccH
Confidence 542 34 99999999888877666555546666553321 1 00000 00 0
Q ss_pred HhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCC---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014832 237 RGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEI---PHGFIFATFMLASMLGSSLASRLMARSPPRV 312 (417)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 312 (417)
++.+++++ ++.++...+...+... .+.....|.|.++++ +.+. ..+.......++..++.++.|+++||+++|
T Consensus 233 ~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r- 309 (412)
T TIGR02332 233 RSMLREIF-TPAIMLYTLAYFCLTN-TLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER- 309 (412)
T ss_pred HHHHHHhc-ChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc-
Confidence 11223333 3555555555444333 344566699999987 3333 335566777889999999999999999877
Q ss_pred cchH-HHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccc
Q 014832 313 ESYM-QIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF 391 (417)
Q Consensus 313 ~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 391 (417)
+.. ........+.. .+..... +....+....+.+++.....+.......|.+|+++|++++|+
T Consensus 310 -~~~~~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~ 373 (412)
T TIGR02332 310 -KHHTALPYLFAAAGW-LLASATD--------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAV 373 (412)
T ss_pred -HHHHHHHHHHHHHHH-HHHHhcC--------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHH
Confidence 432 22222332222 2111110 112222222333333333334455566788999999999999
Q ss_pred cccchhHHHHHHHHHhcC
Q 014832 392 FRIPLNIFVCVVLYNVCS 409 (417)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ 409 (417)
.+...+++..++......
T Consensus 374 ~~~~~~~g~~~~p~~~g~ 391 (412)
T TIGR02332 374 INATGNIGSALSPFLIGI 391 (412)
T ss_pred HHHhhhhhhhhhhhhccc
Confidence 999999999888875543
No 9
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.98 E-value=1.8e-29 Score=243.66 Aligned_cols=344 Identities=13% Similarity=0.015 Sum_probs=244.4
Q ss_pred hHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHH
Q 014832 40 NNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (417)
Q Consensus 40 ~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~ 115 (417)
|..+....+..+...++ ...+|.+.+|+|.+.++.+|+.+.+.++...++++.|+++||+|||+++..+..+..++
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~ 84 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLA 84 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 33444444444444433 67788999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Q 014832 116 CI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF 193 (417)
Q Consensus 116 ~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~ 193 (417)
++ +++++|++.++++|+++|++.+...+.. ...+.+. .+ .+.+....+..... ..+|..++|.+++.+.++.
T Consensus 85 ~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~-~~~l~~~~~~----~~~r~~~~g~~~~~-~~~g~~~gp~lgg~l~~~~ 158 (495)
T PRK14995 85 SLAAAFSPTASWLIATRALLAIGAAMIVPAT-LAGIRATFTE----EKQRNMALGVWAAV-GSGGAAFGPLVGGILLEHF 158 (495)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCC----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhccC
Confidence 99 9999999999999999999999887766 3444343 11 11122233333333 6667788888888888888
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHH--------------------------------------
Q 014832 194 SLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQ-------------------------------------- 235 (417)
Q Consensus 194 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------- 235 (417)
+||+.|++...+.++..++..+..|+++++++++.+....
T Consensus 159 --gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (495)
T PRK14995 159 --YWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLL 236 (495)
T ss_pred --ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Confidence 9999999988877777666665666654332221111000
Q ss_pred -------H--HhH--HHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCC---ChhHHHHHHHHHHHHHHHHH
Q 014832 236 -------F--RGA--AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI---PHGFIFATFMLASMLGSSLA 301 (417)
Q Consensus 236 -------~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 301 (417)
. +++ -.+++|+|.+....+...+.....+ ....+.|.|+++..+. +.|.......++..++.++.
T Consensus 237 ~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~ 315 (495)
T PRK14995 237 GLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLV-GFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIA 315 (495)
T ss_pred HHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 0245666665554444433333333 3445788888764433 34777777888999999999
Q ss_pred HHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCC
Q 014832 302 SRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIP 381 (417)
Q Consensus 302 g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p 381 (417)
|++.||+|+| +.+..+..+..++......... .. +.+......++.|++.+...+.......+..|
T Consensus 316 g~l~~r~g~~--~~~~~g~~~~~~~~~~l~~~~~-~~-----------~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~ 381 (495)
T PRK14995 316 GILVSRLGLR--LVATGGMALSALSFYGLAMTDF-ST-----------QQWQAWGLMALLGFSAASALLASTSAIMAAAP 381 (495)
T ss_pred HHHHHHcCch--HHHHHHHHHHHHHHHHHHHhcC-CC-----------chHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 9999999987 6666666655555444333221 01 33445567788899999988888999999999
Q ss_pred cccccccccccccchhHHHHHHHHH
Q 014832 382 EEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 382 ~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
+++++.+.++.++..++|..+|...
T Consensus 382 ~~~~g~~~~~~~~~~~lG~~~G~ai 406 (495)
T PRK14995 382 PEKAAAAGAIETMAYELGAGLGIAI 406 (495)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988777643
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.98 E-value=1.5e-29 Score=237.66 Aligned_cols=315 Identities=15% Similarity=0.124 Sum_probs=226.1
Q ss_pred hhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHH
Q 014832 55 LQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRIL 133 (417)
Q Consensus 55 ~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l 133 (417)
...+.+|.+.+|+|.|+++.|++.+.+.+++.+++++.|+++||+||||++..+..+..++.+ +.+++|++.+++.|++
T Consensus 27 ~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 106 (390)
T PRK03545 27 VPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIG 106 (390)
T ss_pred HHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 345678899999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHH
Q 014832 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
+|++.+...+.. .+++.|+ ++|++.. +.. ..+..+|..++|.+++.+.+.+ |||+.|++.+++.++
T Consensus 107 ~G~~~~~~~~~~-~~~i~~~~~~~~r~~~~-------g~~-~~~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~l 175 (390)
T PRK03545 107 IAFAHAIFWSIT-ASLAIRVAPAGKKAQAL-------SLL-ATGTALAMVLGLPLGRVIGQYL--GWRTTFLAIGGGALI 175 (390)
T ss_pred HHHHHHHHHHHH-HHHHHHhCChhhhhhHH-------HHH-HHHHHHHHHHHhhHHHHHHHHh--cHHHHHHHHHHHHHH
Confidence 999998887877 5677877 3444322 222 2235566677777777777777 999999999888777
Q ss_pred HHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCC---ChhHHH
Q 014832 211 GMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI---PHGFIF 287 (417)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 287 (417)
..+......||+++++++ ..++.++.+|+++++.......+.....+ ....|.|.+.++..+. +.+...
T Consensus 176 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~g~s~~~~~~~~ 247 (390)
T PRK03545 176 TLLLLIKLLPLLPSEHSG-------SLKSLPLLFRRPALVSLYLLTVVVVTAHF-TAYSYIEPFVQQVAGLSENFATLLL 247 (390)
T ss_pred HHHHHHHhCCCCCCCCcc-------hHHHHHHHHhCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCCccHHHHHH
Confidence 666555445554322111 12245677888877655444333333333 2334666666653332 246666
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014832 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (417)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (417)
....++.++++++.+++.||+++| + +..+..+............. +.+...+..++.|++...
T Consensus 248 ~~~~~~~~~g~~~~g~l~dr~~~~--~-~~~~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~l~g~~~~~ 310 (390)
T PRK03545 248 LLFGGAGIIGSVLFSRLGNRHPSG--F-LLIAIALLLVCLLLLLPAAN--------------SEWHLSVLSIFWGIAIMC 310 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhccchh--H-HHHHHHHHHHHHHHHHHHhc--------------hHHHHHHHHHHHHHHHhc
Confidence 777889999999999999998765 3 44444433333332222221 445556677778888777
Q ss_pred cchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 368 FWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
..+.......|..| +.|++++|+.+...+++..+|...
T Consensus 311 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~ 348 (390)
T PRK03545 311 IGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALL 348 (390)
T ss_pred chHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777888888877 578999998887777777666654
No 11
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.98 E-value=1.1e-29 Score=239.93 Aligned_cols=344 Identities=18% Similarity=0.137 Sum_probs=239.7
Q ss_pred CcchhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHH
Q 014832 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (417)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 111 (417)
.+++|......+...+.++++ .+..|.+.+|+|.|+.+.|++.+...++..+++++.|+++||+|||+++..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 346776666666666666554 5777888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 014832 112 YILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (417)
Q Consensus 112 ~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~ 187 (417)
..++.+ +.++++++.+++.|++.|++.+...+.. ..++.|+ ++|++ ..+.... +..+|..+++.++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~-~~~~~~~~~~~~r~~-------~~~~~~~-~~~~g~~~~~~~~~ 160 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNL-IALTSEAVGPRLRGT-------AVSLMYC-GVPFGGALASVIGV 160 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHH-HHHHHHHcCHHHHHH-------HHHHHHH-HHHHHHHHHHHHHH
Confidence 999988 9999999999999999999999888877 6688887 23333 2332222 35566677777776
Q ss_pred hhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhcc---chhHHHHHHHHHHHhHHH
Q 014832 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASD---EKIALLGAIQSLFEGSMY 264 (417)
Q Consensus 188 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 264 (417)
.+.+.. +||..|++.++..++..++.....||++++++++++ .++.++..+..+++ ++.+....... ......
T Consensus 161 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 236 (406)
T PRK11551 161 LAAGDA--AWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA-GKQRAPVLRALFGEGRATATLLLWISYF-FTLIVL 236 (406)
T ss_pred HHcccc--CHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc-chhhhhhHHHHhhhhhhhHHHHHHHHHH-HHHHHH
Confidence 666666 899999988776665555554456665432211110 00111111222222 22222222222 222233
Q ss_pred HHHHhhhccccCC-CCC-CChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 014832 265 TFVFLWTPALSPN-DEE-IPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNV 342 (417)
Q Consensus 265 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (417)
.....|.|.+.++ +.+ .+.+.......++.++++++.|++.||+++| +.+........+++.......
T Consensus 237 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~-------- 306 (406)
T PRK11551 237 YFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR--RVVLLIYAGILASLAALAAAP-------- 306 (406)
T ss_pred HHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHHhcC--------
Confidence 3455578888876 322 2346777788889999999999999999877 666554444444433333222
Q ss_pred CCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhcC
Q 014832 343 KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCS 409 (417)
Q Consensus 343 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~~ 409 (417)
+.+...+..++.+++.+...+...++..|.+|+++|+++.|+.+...+++..++......
T Consensus 307 -------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~ 366 (406)
T PRK11551 307 -------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQ 366 (406)
T ss_pred -------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhh
Confidence 334455566667777777778889999999999999999999999888888888776543
No 12
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4.2e-30 Score=227.76 Aligned_cols=349 Identities=14% Similarity=0.086 Sum_probs=257.2
Q ss_pred CcCCcchhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHH
Q 014832 33 SAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTY 108 (417)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 108 (417)
+.++++|+.++...++.+....+. ....|.+.+|.++|.+|+|.+.+.+++.+.++..+.|.++||.+.|+.+.++
T Consensus 21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~g 100 (448)
T COG2271 21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHH
Confidence 346777888887777777766654 6778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 014832 109 CLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGL 184 (417)
Q Consensus 109 ~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 184 (417)
+++.++..+ ++++++.+.+.+..++.|..+|.-+|++ ...++.| ++||..-+..+... ++|+.+.+.
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~-~~~i~~Wfsr~eRG~~~siWn~sh--------NiGGal~~~ 171 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPC-ARTITHWFSRKERGTWWSIWNTSH--------NIGGALAPL 171 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHH-HHHHHHHcCccccCceEEEehhhh--------hcccchHHH
Confidence 999999999 9999999999999999999999999999 5677777 77887666555433 333344444
Q ss_pred hh--hhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCC----------CCchh-HHHH-------HHhHHHHHh
Q 014832 185 FG--NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP----------SESKD-LLTQ-------FRGAAVAIA 244 (417)
Q Consensus 185 ~~--~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~~-------~~~~~~~~~ 244 (417)
+. +.+..++ +||..|++.++++++..++.++..++++++. ++.+. ++++ .+.-.+.++
T Consensus 172 ~~~la~~~~~~--~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL 249 (448)
T COG2271 172 VALLAFFAFHG--GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVL 249 (448)
T ss_pred HHHHHHHHhcc--chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHH
Confidence 44 6666666 9999999999998888877775655543211 11111 1111 111345688
Q ss_pred ccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHH
Q 014832 245 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV 321 (417)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~ 321 (417)
+||.+|.+++...+....-+ ....|.|.|+.+..+.+ .+...+.+-.++++|++++|+++||+-+..|....+.+.
T Consensus 250 ~Nk~iW~la~a~vfvYivR~-gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~ 328 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRY-GINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFM 328 (448)
T ss_pred cChHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHH
Confidence 99999999999988888777 56669999999944443 466778888999999999999999984321244443333
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhH-HH
Q 014832 322 VSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNI-FV 400 (417)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-~~ 400 (417)
+.....+...... .+. +.+...+.++..|+......-..-....|..|++.-|++.|+.....-+ |.
T Consensus 329 ~~i~~~~~~~w~~-~~~-----------~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga 396 (448)
T COG2271 329 LLITASLVLYWLA-PNG-----------SYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGA 396 (448)
T ss_pred HHHHHHHHHHHcC-CCc-----------cHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhH
Confidence 3333332222222 111 4466666677777766555566777899999999999999997776665 44
Q ss_pred HHHHH
Q 014832 401 CVVLY 405 (417)
Q Consensus 401 ~~~~~ 405 (417)
..+.+
T Consensus 397 ~~a~~ 401 (448)
T COG2271 397 ALAGL 401 (448)
T ss_pred HhcCC
Confidence 44433
No 13
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=3.2e-29 Score=238.32 Aligned_cols=342 Identities=15% Similarity=0.080 Sum_probs=212.9
Q ss_pred chhHHHHHHHHHHHHhhhh----hhhHHH-HHHhc--CCCcchHHHHH-----HHHHHHHhhhhccccccccccCchHHH
Q 014832 38 FKNNYLLVYSLMMAGDWLQ----GPYVYY-LYSTY--GFGKGEIGQLF-----IAGFGSSMLFGTIVGSLADKQGRKRAC 105 (417)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~----~~~l~~-l~~~~--g~s~~~~g~~~-----s~~~~~~~~~~~~~G~l~Dr~Grr~~~ 105 (417)
++++.....++..+.++++ ....|. +.+++ +.++. .+++. ++.+++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 4455666666677777776 233332 34555 66765 45543 356677889999999999999999999
Q ss_pred HHHHHHHHHHHH-HhcCchHH--------HHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHH
Q 014832 106 VTYCLTYILSCI-TKHSPQYK--------ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFL 173 (417)
Q Consensus 106 ~~~~~~~~~~~~-~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~ 173 (417)
..+..+++++++ ++++++++ .+++.|+++|++.|..++.. ..++.|+ ++|++.... .. .
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~-~~~~~e~~p~~~rg~~~~~----~~----~ 168 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGA-ALLAVESAPKNKKAFYSSG----VQ----V 168 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHH-HHHHHHhCCCCCCcHHHHH----HH----H
Confidence 999999999999 99999987 58899999999999998888 6789998 344432222 22 2
Q ss_pred HHHHHHHHHhhhhhhhh--------hhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchh--HHHHHHhHHHHH
Q 014832 174 GNGLVAILSGLFGNLLV--------DSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKD--LLTQFRGAAVAI 243 (417)
Q Consensus 174 g~~~g~~l~~~~~~~~~--------~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 243 (417)
|..+|.+++..+...+. +.+ |||.+|++.+++.++...+ ....||+++..++.++ +.++..+..+.+
T Consensus 169 g~~~G~~l~~~~~~~l~~~~~~~~~~~~--gWr~~f~~~~~~~l~~~~l-~~~~~es~~~~~~~~~~~~~~~~~~~~~~l 245 (438)
T PRK09952 169 GYGVGLLLSTGLVSLISMMTTDEQFLSW--GWRIPFLFSIVLVLIALWV-RNGMEESAEFEQQQHEQAAAKKRIPVIEAL 245 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHhhcc--ChHHHHHHHHHHHHHHHHH-HHhCCCChhHHHHHhhcccccccCCHHHHH
Confidence 23344444433332222 234 9999999888776553332 2244554321111000 000011122345
Q ss_pred hccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCChhH---HHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHH
Q 014832 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGF---IFATFMLASMLGSSLASRLMARSPPRVESYMQIVF 320 (417)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~ 320 (417)
+|+++.+.......+.....++....|.|.|.++..+.+... .....++...++.++.|+++||+||| +.+..+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr--~~~~~~~ 323 (438)
T PRK09952 246 LRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR--RVYITGA 323 (438)
T ss_pred HHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch--HHHHHHH
Confidence 667776665544434344444455668898887655554432 23344566778889999999999988 6666555
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCccccccccccccc-chhHH
Q 014832 321 VVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI-PLNIF 399 (417)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~-~~~~~ 399 (417)
.+..++...........+ +.+..+...++.+++.+...+..+++..|.+|++.|+++.++... ...++
T Consensus 324 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lg 392 (438)
T PRK09952 324 LIGTLSAFPFFMALEAQS-----------IFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVG 392 (438)
T ss_pred HHHHHHHHHHHHHHHcCC-----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHH
Confidence 544433322222111000 223334455566777777778889999999999999999888532 23345
Q ss_pred HHHHHH
Q 014832 400 VCVVLY 405 (417)
Q Consensus 400 ~~~~~~ 405 (417)
+.++..
T Consensus 393 g~~~p~ 398 (438)
T PRK09952 393 GGFTPF 398 (438)
T ss_pred HHHHHH
Confidence 444443
No 14
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=3.5e-29 Score=236.54 Aligned_cols=346 Identities=14% Similarity=0.094 Sum_probs=229.0
Q ss_pred CCcchhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHH
Q 014832 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (417)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 110 (417)
+++++|+.+..+.+..+.+.++ .+..|.+.+++|.|+.+.|++.+...++..+++++.|+++||+|||+++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4556777766666666666544 677888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014832 111 TYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (417)
Q Consensus 111 ~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~ 186 (417)
+.+++.+ +.++++++.+++.|++.|++.+...+.. ..++.|+ ++|++. .+.... +..+|..+++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~-~~~i~~~~~~~~~~~~-------~~~~~~-~~~~g~~~~~~l~ 156 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSS-AAYVIESWPKHLRNKA-------SGLLIS-GYAVGAVVAAQVY 156 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHH-HHHHHHhCChhhhhHH-------HHHHHH-HHHHHHHHHHHHH
Confidence 9999999 9999999999999999999999988887 6688887 333332 222222 2455556666666
Q ss_pred hhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHH------------------h----
Q 014832 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAI------------------A---- 244 (417)
Q Consensus 187 ~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~---- 244 (417)
+.+.+..+.+||+.|.+.++..++..+.. ...||+++.+++.+++ ++.++..++. .
T Consensus 157 ~~l~~~~~~~w~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
T TIGR00891 157 SLVVPVWGDGWRALFFISILPIIFALWLR-KNIPEAEDWKEKHAGK-ALVRTMVDILYGGEHRIANIVMTLAAAMVQSAG 234 (405)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHH-HhCCCChhHHHHhhhh-hhhhhHHHHHhccchhhhhhhhhhhHHhhhhhh
Confidence 66665551249999988766655544433 3566653211111000 0000000000 0
Q ss_pred ccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHH
Q 014832 245 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV 321 (417)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~ 321 (417)
+++......................+.|.|.++..+.+ .+.......++.+++.++.+++.||+++| +.+..+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~--~~~~~~~~ 312 (405)
T TIGR00891 235 KRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR--KAYVCSLL 312 (405)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch--hhhHHHHH
Confidence 00111111111111112222234446787776543333 35666777889999999999999999988 66665555
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHH
Q 014832 322 VSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVC 401 (417)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~ 401 (417)
...+.......... +.+...+...+.++..+...+....++.|.+|+++|++++|+.+...+++..
T Consensus 313 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ 378 (405)
T TIGR00891 313 AGQLLIIPVFAIGA--------------NVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGA 378 (405)
T ss_pred HHHHHHHHHHHhCC--------------chHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHH
Confidence 44332222221110 3344444445556666666778888999999999999999998888888877
Q ss_pred HHHHHh
Q 014832 402 VVLYNV 407 (417)
Q Consensus 402 ~~~~~~ 407 (417)
++....
T Consensus 379 ~g~~~~ 384 (405)
T TIGR00891 379 LAPIIG 384 (405)
T ss_pred HHHHHH
Confidence 777643
No 15
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.97 E-value=2.1e-29 Score=248.04 Aligned_cols=346 Identities=16% Similarity=0.144 Sum_probs=238.0
Q ss_pred CCcchhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHH
Q 014832 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (417)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 110 (417)
..+++|.++.++.+..+.++++ .+.+|.+.+++|++..+.+++.++.+++..++++++|+++||+|||++++++.+
T Consensus 161 ~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~li 240 (742)
T TIGR01299 161 HGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLS 240 (742)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 4566777777777777766653 567888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014832 111 TYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (417)
Q Consensus 111 ~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~ 186 (417)
+.+++.+ ++++++++.++++|++.|++.+...+.. ..++.|. ++|+...+..... ..+|.++++.++
T Consensus 241 l~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~-~~~isE~~p~~~Rg~~~g~~~~~--------~~iG~ila~~la 311 (742)
T TIGR01299 241 VNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIV-FSYFAEFLAQEKRGEHLSWLCMF--------WMIGGIYAAAMA 311 (742)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCHHHHHHHHHHHHHH--------HHHHHHHHHHHH
Confidence 9999999 9999999999999999999999988888 7799998 3344333332222 333333333333
Q ss_pred hhhhhhc-----------cCCCchhHHHHHHHHHHHHHHHHhhccccCC------CCCCc------------------hh
Q 014832 187 NLLVDSF-----------SLGPVAPFDAAACFLAIGMVIILSSWTENYG------DPSES------------------KD 231 (417)
Q Consensus 187 ~~~~~~~-----------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~------~~~~~------------------~~ 231 (417)
..+...+ ..+||+.+++.+++.++.++..+ ..||++. +.+++ .+
T Consensus 312 ~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~-~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~ 390 (742)
T TIGR01299 312 WAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALT-FMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEK 390 (742)
T ss_pred HHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhH
Confidence 2222211 12799999988877666655444 6677531 10000 00
Q ss_pred H-----------HH-------H------------------HHhHHHHHhccch--hHHHHHHHHHHHhHHHHHHHhhhcc
Q 014832 232 L-----------LT-------Q------------------FRGAAVAIASDEK--IALLGAIQSLFEGSMYTFVFLWTPA 273 (417)
Q Consensus 232 ~-----------~~-------~------------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (417)
. .+ + ...+++++++++. ..++.....+.....++.+..|.|.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~ 470 (742)
T TIGR01299 391 VFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPD 470 (742)
T ss_pred HHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0 0012333444321 1122222233344566678889996
Q ss_pred ccCCC-------------------------------------------C-------------------------------
Q 014832 274 LSPND-------------------------------------------E------------------------------- 279 (417)
Q Consensus 274 ~~~~~-------------------------------------------~------------------------------- 279 (417)
++++. .
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 550 (742)
T TIGR01299 471 MIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCT 550 (742)
T ss_pred HHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccc
Confidence 53110 0
Q ss_pred ---------------------------------CCC----------hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchH
Q 014832 280 ---------------------------------EIP----------HGFIFATFMLASMLGSSLASRLMARSPPRVESYM 316 (417)
Q Consensus 280 ---------------------------------~~~----------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l 316 (417)
+.+ ......+..++.+++.++.++++||+||| +.+
T Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr--~~l 628 (742)
T TIGR01299 551 FIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL--RML 628 (742)
T ss_pred hhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH--HHH
Confidence 000 01123455578899999999999999998 888
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccch
Q 014832 317 QIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL 396 (417)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 396 (417)
..+.++.++++++..+.. +....++..++.+++.+..++...++++|.+|++.|++++|+.+...
T Consensus 629 ~~~~~lsai~~ll~~~~~---------------s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~ 693 (742)
T TIGR01299 629 AGSMVLSCISCFFLSFGN---------------SESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALC 693 (742)
T ss_pred HHHHHHHHHHHHHHHHHc---------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 777777777766655544 33445555566777777778999999999999999999999999999
Q ss_pred hHHHHHHHHHh
Q 014832 397 NIFVCVVLYNV 407 (417)
Q Consensus 397 ~~~~~~~~~~~ 407 (417)
++|.+++.+..
T Consensus 694 rlGaiigp~i~ 704 (742)
T TIGR01299 694 KAAAVLGILIF 704 (742)
T ss_pred HHHHHHHHHHH
Confidence 99988887654
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.97 E-value=1.3e-28 Score=230.95 Aligned_cols=314 Identities=15% Similarity=0.169 Sum_probs=219.4
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
.+.+|++.+|+|+++++.|+..+...++..+++++.|+++||+|||+++..+.++.+++.+ +.++++++.+++.|+++|
T Consensus 40 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 119 (394)
T PRK10213 40 VSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLG 119 (394)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 5678899999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~ 215 (417)
++.+...+.. ..++.|+.+ .+.+....+..... ..+|..++|.+++.+.+.+ |||+.|++.+++.++..+..
T Consensus 120 ~~~g~~~~~~-~~~i~~~~~----~~~~~~a~~~~~~~-~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~l~~~~~l~~ 191 (394)
T PRK10213 120 LALGGFWAMS-ASLTMRLVP----PRTVPKALSVIFGA-VSIALVIAAPLGSFLGELI--GWRNVFNAAAVMGVLCIFWI 191 (394)
T ss_pred HhhHHHHHHH-HHHHHHHcC----HhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhc--CHHHHHHHHHHHHHHHHHHH
Confidence 9999988887 678888811 11122223322222 5566677777777777777 99999999887776655554
Q ss_pred HhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhh-ccccCC-CCCC-ChhHHHHHHHH
Q 014832 216 LSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWT-PALSPN-DEEI-PHGFIFATFML 292 (417)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~-~~~~~~~~~~~ 292 (417)
....||+++++++. .++.++.+|+|+++...+...+.....+.. ..+. |.+.++ +.+. ..+......++
T Consensus 192 ~~~~p~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~g~s~~~~g~~~~~~~~ 263 (394)
T PRK10213 192 IKSLPSLPGEPSHQ-------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAF-FTYIRPVYMNLAGFGVDGLTLVLLSFGI 263 (394)
T ss_pred HHHCCCCCcccccc-------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCChhHHHHHHHHHHH
Confidence 44456543221111 122446778888776655433333333322 2344 666554 3333 23666777888
Q ss_pred HHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHH-HHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchh
Q 014832 293 ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVS-LLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPS 371 (417)
Q Consensus 293 ~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 371 (417)
+.+++.++.+++.||.+ | +.+.....+...+ +.+..... +.+......++.|++.+...+.
T Consensus 264 ~~iig~~~~~~l~~r~~-~--~~l~~~~~~~~~~~~~l~~~~~---------------~~~~~~~~~~l~G~~~~~~~~~ 325 (394)
T PRK10213 264 ASFVGTSLSSFILKRSV-K--LALAGAPLVLAVSALVLTLWGS---------------DKIVATGVAIIWGLTFALVPVG 325 (394)
T ss_pred HHHHHHHHHHHHHhccc-h--hHHHHHHHHHHHHHHHHHHHhh---------------hHHHHHHHHHHHHHHHHhhhHH
Confidence 99999999999999953 3 3444443333333 22222222 4456666788889999988898
Q ss_pred HHHHHhhcCCcccccccccccccchhHHHHHHHH
Q 014832 372 IMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 372 ~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
..+.+++..|++ ++++.++.....+++..+|..
T Consensus 326 ~~~~~~~~~~~~-~~~~~~~~~~~~~lg~~~G~~ 358 (394)
T PRK10213 326 WSTWITRSLADQ-AEKAGSIQVAVIQLANTCGAA 358 (394)
T ss_pred HHHHHHHHCccc-HHHHHHHHHHHHHHHHHHHHH
Confidence 998999988854 556655555555666555554
No 17
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=5.2e-29 Score=240.30 Aligned_cols=343 Identities=18% Similarity=0.177 Sum_probs=214.5
Q ss_pred hHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcch----HHH--HHHHHHHHHhhhhccccccccccCchHHHHHHH
Q 014832 40 NNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGE----IGQ--LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC 109 (417)
Q Consensus 40 ~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~----~g~--~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 109 (417)
++......+..+.++++ ....|.+.++++.+.++ ++. +.++.++++.+++++.|+++||+|||+++..+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 34455555666777766 45666777888644322 222 257788999999999999999999999999999
Q ss_pred HHHHHHHH-HhcCchHHH--------HHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHH
Q 014832 110 LTYILSCI-TKHSPQYKI--------LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGL 177 (417)
Q Consensus 110 ~~~~~~~~-~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~ 177 (417)
++++++++ +++++|++. +++.|+++|++.|..++.. ..+++|+ ++|++..... ..+...|..+
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~-~~~~~e~~p~~~Rg~~~~~~----~~~~~~G~~l 169 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGA-SIFVAEYSPDRKRGFMGSWL----DFGSIAGFVL 169 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHH-HHHHHHhCCCCCCcHHHHHH----HHHHHHHHHH
Confidence 99999999 999999864 8999999999999999988 7799998 5566543333 2233333444
Q ss_pred HHHHHhhhhhhh----hhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCch---h-HH----HHHHhHHHHHhc
Q 014832 178 VAILSGLFGNLL----VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESK---D-LL----TQFRGAAVAIAS 245 (417)
Q Consensus 178 g~~l~~~~~~~~----~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~----~~~~~~~~~~~~ 245 (417)
|..+...+...+ ...+ |||++|++.+++.++..++ ....||++...++.+ + .. ++.+.+++++++
T Consensus 170 g~~~~~~~~~~~~~~~~~~~--gWR~~f~i~~~~~l~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (490)
T PRK10642 170 GAGVVVLISTIVGEANFLDW--GWRIPFFIALPLGIIGLYL-RHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIAT 246 (490)
T ss_pred HHHHHHHHHHhcCHHHhcCc--cHHHHHHHHHHHHHHHHHH-HHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHH
Confidence 444433333322 2344 9999999977665554443 335666532110000 0 00 011224555554
Q ss_pred c-chhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCCh---hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHH
Q 014832 246 D-EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV 321 (417)
Q Consensus 246 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~ 321 (417)
+ ++.+.......+.....++....|.|.|+++..+.+. +.......++..++.++.|+++||+||| +.+..+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr--~~~~~~~~ 324 (490)
T PRK10642 247 KHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR--PFVILGSV 324 (490)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHH
Confidence 3 3333333333333334455566689999866444332 3334555678889999999999999988 66655554
Q ss_pred HHHHHHHH-HHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHH
Q 014832 322 VSSVSLLL-PIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFV 400 (417)
Q Consensus 322 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~ 400 (417)
...+.... ...... . +.....+..++.+++.+...+....+..|.+|++.|+++.|+..-..++++
T Consensus 325 ~~~~~~~~~~~~~~~--~-----------~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g 391 (490)
T PRK10642 325 ALFVLAIPAFILINS--N-----------VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVA 391 (490)
T ss_pred HHHHHHHHHHHHHhC--C-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHH
Confidence 33322222 111110 0 234445555666666666667777888999999999999886332233433
Q ss_pred HHHHH
Q 014832 401 CVVLY 405 (417)
Q Consensus 401 ~~~~~ 405 (417)
.++.+
T Consensus 392 ~~~p~ 396 (490)
T PRK10642 392 GLTPT 396 (490)
T ss_pred HHHHH
Confidence 33333
No 18
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.97 E-value=5.8e-30 Score=237.16 Aligned_cols=333 Identities=22% Similarity=0.290 Sum_probs=237.5
Q ss_pred HHHHHHHhhhhhhhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCch
Q 014832 46 YSLMMAGDWLQGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQ 123 (417)
Q Consensus 46 ~~~~~~~~~~~~~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~ 123 (417)
.++..+......+.+| .+.+++|.|+.+++++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+ ..++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~ 84 (352)
T PF07690_consen 5 FFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASN 84 (352)
T ss_dssp HHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhh
Confidence 3455555666678888 78899999999999999999999999999999999999999999999999999966 666688
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-c--ccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchh
Q 014832 124 YKILMIGRILGGIATSLLFSAFESWLVAEH-N--KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP 200 (417)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~--~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~ 200 (417)
.+.+++.|++.|++.+...+.. ..++.|+ + +|++ ..+..... ..+|..+++.+++.+.+.. +||+.
T Consensus 85 ~~~~~~~~~l~g~~~~~~~~~~-~~~i~~~~~~~~~~~-------~~~~~~~~-~~~g~~~g~~l~~~l~~~~--~~~~~ 153 (352)
T PF07690_consen 85 FWLLLIARFLLGIGSGFFSPAS-NALIADWFPPEERGR-------AFGILSAG-FSLGSILGPLLGGFLISYF--GWRWA 153 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCTCCHHH-------HHHHHHHH-HHHHHHHHHHHHHHCCCHC--HHCCH
T ss_pred HHHHhhhccccccccccccccc-cccccccchhhhhhh-------ccccccch-hhhhhhcccchhhhhhhcc--ccccc
Confidence 8899999999999999998888 6788888 2 3332 33333333 6666677788888887777 99999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCc--hhH----HHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccc
Q 014832 201 FDAAACFLAIGMVIILSSWTENYGDPSES--KDL----LTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (417)
Q Consensus 201 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (417)
|++.+++.++..++.....+++++++++. +++ +++..+.++.+++++..+...... +.....+.....+.|.|
T Consensus 154 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 232 (352)
T PF07690_consen 154 FLISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAF-FLFFFVFSGFSFFLPLY 232 (352)
T ss_dssp HHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhh-hHHHHHHHHhhcccchh
Confidence 99999988887765332333333222111 111 111112366677777665222222 22333333456689998
Q ss_pred cCCCCCCC----hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccc
Q 014832 275 SPNDEEIP----HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFS 350 (417)
Q Consensus 275 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (417)
+++..+.+ .+.......+...++.++.+++.||++++ +..........+........... + +
T Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~-----------~ 298 (352)
T PF07690_consen 233 LQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR--RRLLIAILLLILGALGLLLLPFS-S-----------S 298 (352)
T ss_dssp CCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHCCSHHH-C-----------H
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHHHHHHHHHHh-h-----------h
Confidence 77744433 34556777788888899999999999876 55555555544444443333311 0 3
Q ss_pred hhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHH
Q 014832 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVL 404 (417)
Q Consensus 351 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~ 404 (417)
........++.|++.+...+...++..|.+|+++||++.|+.+...+++..+++
T Consensus 299 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 299 PVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 355566777889999999999999999999999999999999998888888764
No 19
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=2.2e-28 Score=232.67 Aligned_cols=335 Identities=16% Similarity=0.197 Sum_probs=208.4
Q ss_pred hhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHH-HHH-----HHHHhhhhccccccccccCchHHHHHH
Q 014832 39 KNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLF-IAG-----FGSSMLFGTIVGSLADKQGRKRACVTY 108 (417)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~-s~~-----~~~~~~~~~~~G~l~Dr~Grr~~~~~~ 108 (417)
|++.....++..+.+.++ .+..|.+.+|++.++.+.+.+. +.. ++...+++++.|+++||+||||+++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 344555556666666665 6788889999999888765432 222 233357889999999999999999999
Q ss_pred HHHHHHHHH-HhcCchHH--------HHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHH
Q 014832 109 CLTYILSCI-TKHSPQYK--------ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNG 176 (417)
Q Consensus 109 ~~~~~~~~~-~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~ 176 (417)
..+..++.+ ++++++++ .+++.|+++|++.+...+.. ..+++|+ ++|++..+........+...|..
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~-~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGV-SVYLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHH-HHHHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999 99999987 46899999999999988877 6789998 55666555444444444444444
Q ss_pred HHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHH
Q 014832 177 LVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQ 256 (417)
Q Consensus 177 ~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (417)
+|..+.+.+.....+.+ |||++|++......+. .......||+++..++ +.+++.++.+++..++++.+......
T Consensus 172 ~g~~l~~~~~~~~~~~~--gWr~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (434)
T PRK15075 172 LGYLLNQWLSPAQMAEW--GWRIPFLIGCLIVPFI-FLIRRSLEETEEFLAR--KHRPSMREIFRSLAANWRIVLAGMLM 246 (434)
T ss_pred HHHHHHHhCCHHHHhcc--chHHHHHHHHHHHHHH-HHHHHhcCCCHHHHHh--hhccccccHHHHHHHhHHHHHHHHHH
Confidence 44444433333333455 9999999755433222 1112122332110000 00001112233444555555444433
Q ss_pred HHHHhHHHHHHHhhhccccCCCCCCCh---hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHH-HH
Q 014832 257 SLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLP-IV 332 (417)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~-~~ 332 (417)
.+.+...+.....|.|.|+++..+.+. +.......++.+++.++.|+++||+||| +.+..+..+........ ..
T Consensus 247 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r--~~~~~~~~~~~~~~~~~~~~ 324 (434)
T PRK15075 247 VAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR--PVLIAFTVLAILTAYPALSW 324 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHH
Confidence 333444455667789999887444432 4444566778899999999999999988 66555443332222111 11
Q ss_pred HhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccc
Q 014832 333 TSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 393 (417)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (417)
... .+ +.........+.+++.+...+....+..|.+|++.|+++.++.+
T Consensus 325 ~~~--~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~ 373 (434)
T PRK15075 325 LVA--AP----------SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAY 373 (434)
T ss_pred HHc--CC----------chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHH
Confidence 111 10 22223333444556666666777788999999999999998853
No 20
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=3.6e-28 Score=228.10 Aligned_cols=327 Identities=14% Similarity=0.100 Sum_probs=233.6
Q ss_pred HhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHH
Q 014832 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIG 130 (417)
Q Consensus 52 ~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 130 (417)
......|..|.+.+|+|.|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.++..++.+ +.++++++.+.+.
T Consensus 20 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (385)
T TIGR00710 20 GIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVL 99 (385)
T ss_pred HHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 334557888899999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHH
Q 014832 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
|++.|++.+...+.. ..++.|+.++. .+....+..... ..+|..+++.+++.+.+.. +||..|++.++..++
T Consensus 100 ~~l~g~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~-~~~g~~~g~~~~~~l~~~~--~~~~~~~~~~~~~~~ 171 (385)
T TIGR00710 100 RFVQAFGASAGSVIS-QALVRDIYPGE----ELSRIYSILMPV-LALAPAVAPLLGGYILVWL--SWHAIFAFLSLAGIL 171 (385)
T ss_pred HHHHHcchhHHHHHH-HHHHHHhcCcH----HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHc--CHHHHHHHHHHHHHH
Confidence 999999999888887 66888872211 122233333333 5556667777777777777 999999998877776
Q ss_pred HHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCC---hhHHH
Q 014832 211 GMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIF 287 (417)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 287 (417)
..+......||+++++++. +.++..++.++.+|+|+.+...+...+.....+ ....+.|.+.++..+.+ .+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~g~~~ 248 (385)
T TIGR00710 172 LSALIFFILPETLPYEARI--QISTYFETFLLLLKSKMFWGYALIYGASFGGFF-AFFSGAPFVYIDIMGVSPSVFGLLF 248 (385)
T ss_pred HHHHHHHhCCCCCCCcccC--CHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH-HHHHcChHHHHHHcCCCHHHHHHHH
Confidence 6666554566654433221 122234566778888888776665544443333 34446787776533333 35666
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014832 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (417)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (417)
....++.+++.++.+++.||+++| +.+..+..+..+.............+ +.........+.+++.+.
T Consensus 249 ~~~~~~~~~~~~~~g~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~g~~~~~ 316 (385)
T TIGR00710 249 ALNIIAMIFGGFLNGRFIKKWGAK--SLLRMGLILFAVSAVLLEITAILGLG----------SWAMIIGPMMFVGIGNSM 316 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHhccc----------hHHHHHHHHHHHHHHHHH
Confidence 677788999999999999999887 66666655555544443332211100 223445556677888888
Q ss_pred cchhHHHHHhhcCCcccccccccccccchhHHHHH
Q 014832 368 FWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCV 402 (417)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~ 402 (417)
..+.......|..| ++|+++.++.+.....+..+
T Consensus 317 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i 350 (385)
T TIGR00710 317 ISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAI 350 (385)
T ss_pred HHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHH
Confidence 88888888889887 56899999877655543333
No 21
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=1.3e-28 Score=234.23 Aligned_cols=345 Identities=12% Similarity=0.030 Sum_probs=224.0
Q ss_pred chhHHHHHHHHHHHHhhh----hhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHH
Q 014832 38 FKNNYLLVYSLMMAGDWL----QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYI 113 (417)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~----~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~ 113 (417)
+++......++..+...+ ..+.+|.+.+++|+|+.+.|++.+.+.++..+++++.|+++||+|||+++.++.++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 20 WRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 444444444444444332 2577889999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 014832 114 LSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLL 189 (417)
Q Consensus 114 ~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~ 189 (417)
++.+ ++++++++.+++.|++.|++.|...+.. ..++.|+ ++|++ ..+..... ..+|..+++.+.+.+
T Consensus 100 ~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~-~~~~~~~~~~~~rg~-------~~~~~~~~-~~~g~~~~~~~~~~l 170 (434)
T PRK11663 100 IINILFGFSSSLWAFALLWVLNAFFQGWGWPVC-AKLLTAWYSRTERGG-------WWAIWNTA-HNVGGALIPLVVGAI 170 (434)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHccchHH-HHHHHHhCCHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHH
Confidence 9999 9999999999999999999999887877 5678887 23333 33333332 556667777777777
Q ss_pred hhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCC---------CCch---hHHH----HHHhHHH-HHhccchhHHH
Q 014832 190 VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---------SESK---DLLT----QFRGAAV-AIASDEKIALL 252 (417)
Q Consensus 190 ~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~----~~~~~~~-~~~~~~~~~~~ 252 (417)
.+.+ |||+.|++.+++.++..+......+|++.+. ++++ ++.+ +.++.++ ..+|+++++..
T Consensus 171 ~~~~--gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (434)
T PRK11663 171 ALHY--GWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLL 248 (434)
T ss_pred HHcc--cHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHH
Confidence 7777 9999999988776555444333444432110 0000 0000 0111111 25567777776
Q ss_pred HHHHHHHHhHHHHHHHhhhccccCCCCCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHH-HHHHHHH
Q 014832 253 GAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV-VSSVSLL 328 (417)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~-~~~~~~~ 328 (417)
.+...+... .+.....|.|.|+++..+.+ .+...+...++..+++++.|+++||+.++.|+....... .......
T Consensus 249 ~~~~~~~~~-~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~ 327 (434)
T PRK11663 249 SFSYVLVYV-VRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG 327 (434)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHH
Confidence 655444333 33355568999986543433 355667778899999999999999984332233322211 1111111
Q ss_pred HHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 329 LPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
....... . +........+..+++.............|..|++.|+++.|+.+...+++..++....
T Consensus 328 ~~~~~~~--~-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~ 393 (434)
T PRK11663 328 SLWLMPF--A-----------SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPL 393 (434)
T ss_pred HHHHccc--c-----------cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccH
Confidence 1111111 0 2122222233333332222233456678999999999999999999999888876544
No 22
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.97 E-value=7.2e-28 Score=227.51 Aligned_cols=330 Identities=15% Similarity=0.176 Sum_probs=233.9
Q ss_pred hhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHH
Q 014832 55 LQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRIL 133 (417)
Q Consensus 55 ~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l 133 (417)
...|.+|.+.+|+|.|+.+.++..+.+.++..+++++.|+++||+||||++..+....+++.+ +.++++++.+++.|++
T Consensus 31 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 110 (406)
T PRK15402 31 MIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFL 110 (406)
T ss_pred hHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 346778888899999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHH
Q 014832 134 GGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~ 212 (417)
.|++.+...+.. ...+.|. +++. .....+..... ..++..++|.+++.+.+.. +||+.|++.++..++..
T Consensus 111 ~G~~~~~~~~~~-~~~i~~~~~~~~-----~~~~~~~~~~~-~~~~~~~g~~i~~~l~~~~--~w~~~~~~~~~~~~~~~ 181 (406)
T PRK15402 111 QGIGLCFIGAVG-YAAIQESFEEAD-----AIKITALMANV-ALLAPLLGPLVGAALIHVL--PWRGMFVLFAALAALSF 181 (406)
T ss_pred HHhHhhhHHHHH-HHHHHHHhChhH-----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHcc--CccHHHHHHHHHHHHHH
Confidence 999998877766 5677776 2221 11122333332 4456677777777777777 99999999888877766
Q ss_pred HHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCCh---hHHHHH
Q 014832 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFAT 289 (417)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 289 (417)
+......||++++++++ ...++..++.++++++|+++...+...+...... ....+.|.++++..+.+. +.....
T Consensus 182 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~g~~~~~~g~~~~~ 259 (406)
T PRK15402 182 FGLWRAMPETAGRVGEK-LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLL-AWIALSPVILISGEQLSSYEYGLLQVP 259 (406)
T ss_pred HHHHHhCCCCCcccccc-ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHhCCCHHHHHHHHHH
Confidence 65554566654332222 1123345567788999988877666554433333 333356777655333433 444455
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccc
Q 014832 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (417)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 369 (417)
..++.+++.++.+++.||+++| +.+..+.....++............. +.+......++.+++.+...
T Consensus 260 ~~~~~~~g~~~~g~l~~r~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~g~g~~~~~ 327 (406)
T PRK15402 260 VFGALIAGNLTLARLTSRRPLR--SLIRMGLWPMVAGLLLAALATVISSH----------AYLWLTAGLSLYAFGIGLAN 327 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHcccc----------cHHHHHHHHHHHHHHHHHHh
Confidence 5667889999999999999877 77766666555555544433211110 33455667778888888777
Q ss_pred hhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhc
Q 014832 370 PSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVC 408 (417)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~ 408 (417)
+..+...... ++++||++.+..+...+++..+|.....
T Consensus 328 ~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~ 365 (406)
T PRK15402 328 AGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSK 365 (406)
T ss_pred hhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666655444 4588999999988888888777766544
No 23
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=1.9e-28 Score=233.13 Aligned_cols=342 Identities=16% Similarity=0.093 Sum_probs=225.4
Q ss_pred cchhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHH
Q 014832 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (417)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 112 (417)
++++.....+.+..+.++++ .+.+|.+.+++|+|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 45555555555555555544 56777888999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 014832 113 ILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (417)
Q Consensus 113 ~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~ 188 (417)
+++.+ ++++++++.+++.|++.|++.+...+.. ..++.|+ ++|++.. +.. ..+..+|..+++.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~-~~~~~~~~~~~~r~~~~-------~~~-~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACA-STYAVESWPKHLKSKAS-------AFL-VSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHhCCHhHhhHhh-------hHH-HHHHhHHHHHHHHHHHH
Confidence 99999 9999999999999999999999888887 6688887 3333322 222 22355666777777777
Q ss_pred hhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCC-----Cch---hHHHHHHhHHHHHhccchhHHHHHHHHH--
Q 014832 189 LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS-----ESK---DLLTQFRGAAVAIASDEKIALLGAIQSL-- 258 (417)
Q Consensus 189 ~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 258 (417)
+.+.. +||+.|++.....++...+ ....||+++.++ +.+ +..+..+.+.++++|+++++........
T Consensus 165 l~~~~--~w~~~f~i~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (426)
T PRK12307 165 FAEAY--GWRAAFFVGLLPVLLVIYI-RARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLF 241 (426)
T ss_pred HcccC--CHHHHHHHHHHHHHHHHHH-HHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHH
Confidence 66666 9999998865443333222 223344321100 000 0001112256677887776543322211
Q ss_pred HHhHHHHHHHhhhccccCC-CCCC-ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhc
Q 014832 259 FEGSMYTFVFLWTPALSPN-DEEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFL 336 (417)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 336 (417)
...........+.|.|+++ +.+. ..+.......++.++++++.+++.||+++| +....+..+..+..........
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~--~~~~~~~~~~~~~~~~~~~~~~- 318 (426)
T PRK12307 242 SIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK--KTFSIGLLMSFLFIFPLFRIPQ- 318 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHcc-
Confidence 1111222234477887766 2222 235556677788999999999999999887 6666665554443333222220
Q ss_pred cCCCCCCCCCcccchhHHHHHHHHHHHh--hhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 337 VAPSNVKSGGISFSGSLQLLGFCTFEAC--VGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~--~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+.. ......+.+.+ .....+.....+.|.+|++.|++++|+.+...+++..++....
T Consensus 319 -------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~ 377 (426)
T PRK12307 319 -------------DNY-LLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAA 377 (426)
T ss_pred -------------ccH-HHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHH
Confidence 111 12222233332 2223455667889999999999999998888888877776643
No 24
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=7.5e-29 Score=238.03 Aligned_cols=343 Identities=15% Similarity=0.034 Sum_probs=221.1
Q ss_pred hhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHH
Q 014832 39 KNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL 114 (417)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~ 114 (417)
.+..+..+++......++ .+..|.+.+|+|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 344444444444433332 5778899999999999999999999999999999999999999999999888777776
Q ss_pred HHH-Hhc-----CchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 014832 115 SCI-TKH-----SPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (417)
Q Consensus 115 ~~~-~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~ 185 (417)
..+ .+. +++++.+++.|+++|++.+...+.. ..+++|+ ++|++..+..... ..+|..+++.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~-~~~i~~~~~~~~rg~a~gi~~~~--------~~lG~~l~~~i 177 (467)
T PRK09556 107 CMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCS-YSTITRWTPRRKRGRFLGFWNIS--------HNLGGAGAGGV 177 (467)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHH-HHHHHHHcCccceeeeEEeeecc--------cchhhhHHHHH
Confidence 655 444 6899999999999999999888887 6688888 4567655544332 33333444444
Q ss_pred hhhhhhh-ccCCCchhHHHHHHHHHHHHHHHHhhccccCCCC---C------Cc---hhH---HHH--HHhH-HHHHhcc
Q 014832 186 GNLLVDS-FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---S------ES---KDL---LTQ--FRGA-AVAIASD 246 (417)
Q Consensus 186 ~~~~~~~-~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~---~~~---~~~--~~~~-~~~~~~~ 246 (417)
...+.+. ...+||..|.+.+++.++..++.+...+++++++ + +. +++ .++ ..+. .++.+|+
T Consensus 178 ~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 257 (467)
T PRK09556 178 ALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKN 257 (467)
T ss_pred HHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcC
Confidence 4433332 1226999998887776655554443333322110 0 00 000 000 0111 2236788
Q ss_pred chhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCCh---hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHH
Q 014832 247 EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVS 323 (417)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~ 323 (417)
+.++...+...+.....+ ....|.|.|+++..+.+. +.......++.+++.++.|+++||+++| +.+.......
T Consensus 258 ~~~~~~~~~~~~~~~~~~-~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r--~~~~~~~~~~ 334 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRI-GIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR--RALVACIALA 334 (467)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--chHHHHHHHH
Confidence 888887776665554444 466799999977555443 4555667788999999999999999887 5554443333
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhH-HHHH
Q 014832 324 SVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNI-FVCV 402 (417)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-~~~~ 402 (417)
............ . +.+...+..++.|+..............|.+|++.||++.|+.+...++ +..+
T Consensus 335 ~~~~~~~~~~~~--~-----------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~ 401 (467)
T PRK09556 335 LIIFTLGVYQHA--T-----------SEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSF 401 (467)
T ss_pred HHHHHHHHHHhc--C-----------cHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHH
Confidence 322222222110 0 2333434455555433222233346777999999999999999887776 4455
Q ss_pred HHHH
Q 014832 403 VLYN 406 (417)
Q Consensus 403 ~~~~ 406 (417)
+...
T Consensus 402 ~~~~ 405 (467)
T PRK09556 402 AKVG 405 (467)
T ss_pred Hhhh
Confidence 5443
No 25
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=3.5e-28 Score=233.27 Aligned_cols=327 Identities=13% Similarity=0.069 Sum_probs=215.1
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
.|.+|.+.+|+|+|..+.+++.+.+.+++.+++++.|+++||+|||+++..+.+..+++.+ ++++++++.+++.|++.|
T Consensus 56 ~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G 135 (476)
T PLN00028 56 APLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIG 135 (476)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 6788899999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-----hccCCCchhHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-----SFSLGPVAPFDAAACF 207 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~-----~~~~gw~~~f~~~~~~ 207 (417)
++.+...+ . ..+++|+ ++|+...+.... ....|..++..+.+.+...+.+ .. |||+.|++.+++
T Consensus 136 ~~~~~~~~-~-~~~i~~~~~~~~rg~a~g~~~~----~~~~g~~~~~~~~~~i~~~~~~~~~~~~~--gWr~~f~i~g~l 207 (476)
T PLN00028 136 FSLATFVS-C-QYWMSTMFNGKIVGTANGIAAG----WGNLGGGVTQLLMPLVFPLIKDAGAPSFT--AWRIAFFVPGLL 207 (476)
T ss_pred HHHHhhHH-H-HHHHHHhcChhheeHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcCCcchh--hhHHHHHHHHHH
Confidence 99886533 3 3467777 445554333222 2223444444554544433222 23 899999999888
Q ss_pred HHHHHHHHHhhccccCCCCC--Cchh----HHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCC
Q 014832 208 LAIGMVIILSSWTENYGDPS--ESKD----LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI 281 (417)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (417)
.++..++.+ ..++++++.+ +.++ ++++..+.+++.+++++.+.+.+.........+ ....|.|.|+.+..+.
T Consensus 208 ~l~~~l~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~l~~~~g~ 285 (476)
T PLN00028 208 HIIMGILVL-TLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVEL-TMDNIIAEYFYDRFGL 285 (476)
T ss_pred HHHHHHHHH-HHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCC
Confidence 776665555 3333222111 0000 011112345667788888777665544333333 3455788887664444
Q ss_pred C---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCc----cchHHH-HHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhH
Q 014832 282 P---HGFIFATFMLASMLGSSLASRLMARSPPRV----ESYMQI-VFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSL 353 (417)
Q Consensus 282 ~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~----~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (417)
+ .+.......++.++++++.|+++||+++|. ++.... ...+..+.+....... +.+.
T Consensus 286 s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~---------------~~~~ 350 (476)
T PLN00028 286 SLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN---------------SLGA 350 (476)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc---------------hHHH
Confidence 3 355666778899999999999999998652 122221 1111112111111111 2234
Q ss_pred HHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhcC
Q 014832 354 QLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCS 409 (417)
Q Consensus 354 ~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~~ 409 (417)
..+.+++.+++.+...+..+++..+..| +.+|++.|+.+...+++..++......
T Consensus 351 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~~ 405 (476)
T PLN00028 351 AIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFFT 405 (476)
T ss_pred HHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHHh
Confidence 4445556666655555566666677654 689999999999999998888776543
No 26
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=2.7e-28 Score=236.03 Aligned_cols=331 Identities=13% Similarity=0.099 Sum_probs=239.6
Q ss_pred hhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHH
Q 014832 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRI 132 (417)
Q Consensus 54 ~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~ 132 (417)
....+.+|.+.+++|.|+.+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.+ ++.+++++.+++.|+
T Consensus 19 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 98 (485)
T TIGR00711 19 TIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRV 98 (485)
T ss_pred HHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHH
Confidence 4447888899999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHH
Q 014832 133 LGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (417)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~ 212 (417)
++|++.+...+.. ..++.|.. +.+.+....+.... +..+|..+++.+++.+.++. +||+.|++.+.+.++..
T Consensus 99 ~~G~~~~~~~~~~-~~~i~~~~----~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~--~w~~~f~~~~~~~~~~~ 170 (485)
T TIGR00711 99 IQGFGGGPLIPLS-FSTLLNIY----PPEKRGRAMAIWGL-TVLVAPALGPTLGGWIIENY--HWRWIFLINVPIGIIVV 170 (485)
T ss_pred HHHhhhhhHHHHH-HHHHHHHC----CHHHHHHHHHHHHH-HHHHHhhhhhccHhHhccCc--CceehhhhhhHHHHHHH
Confidence 9999999988887 66888881 11122223333332 36667788888888888877 99999999887777666
Q ss_pred HHHHhhccccCCCCCCchhHH--------------------------H-H-------------------H--HhH--HHH
Q 014832 213 VIILSSWTENYGDPSESKDLL--------------------------T-Q-------------------F--RGA--AVA 242 (417)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~--------------------------~-~-------------------~--~~~--~~~ 242 (417)
++.....||++++++++.+.. + . . +++ ..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (485)
T TIGR00711 171 VVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLR 250 (485)
T ss_pred HHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHH
Confidence 655545555433221111000 0 0 0 000 123
Q ss_pred HhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHH
Q 014832 243 IASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIV 319 (417)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~ 319 (417)
++|+|+++...+...+.....+ ....+.|.|+++..+.+ .+.......++.+++.++.|++.||+++| +.+..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~--~~~~~g 327 (485)
T TIGR00711 251 LFKYRNFTIGCVYMSLLGLGLY-GSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR--KLVTIG 327 (485)
T ss_pred HHcCCChHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH--HHHHHH
Confidence 5666766665554444333333 44557898888744443 36666777788999999999999999887 776666
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHH
Q 014832 320 FVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIF 399 (417)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~ 399 (417)
..+..++..........+. +.+.......+.|++.+...+.......+..|+++|+++.|+.+...+++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 396 (485)
T TIGR00711 328 LILYAVGFYWRAFTFTPDT-----------PFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLG 396 (485)
T ss_pred HHHHHHHHHHHhccCCCCC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHH
Confidence 6655555544432111001 33445566778889888888777888889999999999999999988888
Q ss_pred HHHHHHH
Q 014832 400 VCVVLYN 406 (417)
Q Consensus 400 ~~~~~~~ 406 (417)
..+|...
T Consensus 397 ~~ig~~i 403 (485)
T TIGR00711 397 GSIGTAL 403 (485)
T ss_pred HHHHHHH
Confidence 8777654
No 27
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=1.7e-27 Score=225.34 Aligned_cols=332 Identities=19% Similarity=0.165 Sum_probs=227.4
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHhcCCCcch-----HHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-
Q 014832 44 LVYSLMMAGDWLQGPYVYYLYSTYGFGKGE-----IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI- 117 (417)
Q Consensus 44 ~~~~~~~~~~~~~~~~l~~l~~~~g~s~~~-----~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~- 117 (417)
...++.....+...|++|.+.+++|.+..+ .|++.++..++..+++++.|+++||+|||+++..+.+..+++.+
T Consensus 21 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 100 (408)
T PRK09874 21 LGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVL 100 (408)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHH
Confidence 333344555566688999989999998765 48899999999999999999999999999999999999999988
Q ss_pred HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcc
Q 014832 118 TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (417)
Q Consensus 118 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~ 194 (417)
+...++++.+++.|++.|++.+. .+.. ..++.|. ++|++ ..+.... +..+|..+++.+++.+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~-~~~~~~~~~~~~~~~-------~~~~~~~-~~~~g~~~~~~~~~~l~~~~- 169 (408)
T PRK09874 101 MGLAQNIWQFLILRALLGLLGGF-VPNA-NALIATQVPRNKSGW-------ALGTLST-GGVSGALLGPLAGGLLADSY- 169 (408)
T ss_pred HHHHhhHHHHHHHHHHHHHhhhh-HHhH-HHHHHHhcCHhhhhH-------HHHHHHH-HHHHHHHHHHHHHHHHHHHh-
Confidence 88899999999999999998654 4555 4466665 23332 2222222 25556677777777777777
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccc
Q 014832 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (417)
Q Consensus 195 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (417)
+||+.|++.++..++..+......+|+++++++++ .++ .++..+.+++++.+...+...+...........+.|.|
T Consensus 170 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (408)
T PRK09874 170 -GLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE--MLH-MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLY 245 (408)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHhccCcccccchh--hhH-HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888777666655545555432222111 111 12233455666654433322222222222233345666
Q ss_pred cCC-CCCCC-----hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcc
Q 014832 275 SPN-DEEIP-----HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (417)
Q Consensus 275 ~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (417)
..+ ..+.+ .+.......++.+++.+..+++.||+++| +.+..+.....+..+......
T Consensus 246 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~-------------- 309 (408)
T PRK09874 246 VRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE--KILITALIFSVLLLIPMSFVQ-------------- 309 (408)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--hhHHHHHHHHHHHHHHHHHhc--------------
Confidence 554 21111 23344556677888999999999999988 777666665554444333333
Q ss_pred cchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 349 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+.+...+..++.|++.+...+...+...+..|++.||+.+++.+...+++..++....
T Consensus 310 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~ 367 (408)
T PRK09874 310 -TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMG 367 (408)
T ss_pred -cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHH
Confidence 4455666777888988888899999999999999999999998888888887777654
No 28
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=1.1e-27 Score=225.25 Aligned_cols=329 Identities=17% Similarity=0.150 Sum_probs=217.0
Q ss_pred hhHHHHHHHHHHHHhhhhhhhHHH-HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH
Q 014832 39 KNNYLLVYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI 117 (417)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~ 117 (417)
.+......++.....++..|.+|. +.+|+|.|+.++|++.+.+.+++.+++++.|+++||+||||++..+.+...++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 333333334445555666788884 5689999999999999999999999999999999999999999998877666543
Q ss_pred -Hh---c-----CchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 014832 118 -TK---H-----SPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (417)
Q Consensus 118 -~~---~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~ 185 (417)
+. . .++++.+++.|+++|++.+...+.. ..++.|. ++|++..+.. + .+...+..++|.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~-~~~~~~~~~~~~r~~a~~~~----~----~~~~~g~~~g~~~ 167 (392)
T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGA-LTWGLGLVGPKHSGKVMSWN----G----MAMYGALAAGAPL 167 (392)
T ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCCccccchhhhHH----H----HHHHHHHHHHHHH
Confidence 22 1 3578899999999999999887776 5566676 4444433322 2 2244455666667
Q ss_pred hhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHH
Q 014832 186 GNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYT 265 (417)
Q Consensus 186 ~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (417)
++.+.+.. |||..+.+..+..++..... +..||++++++++ ++.++..+.+++ +... ..+ ......
T Consensus 168 ~~~l~~~~--g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~-----~~l-~~~~~~ 233 (392)
T PRK12382 168 GLLLHSHF--GFAALALTTMVLPLLAWAFN-GTVRKVPAHAGER----PSLWSVVGLIWK-PGLG-----LAL-QGVGFA 233 (392)
T ss_pred HHHHHhcc--ChHHHHHHHHHHHHHHHHHH-HhccCCCCCcccC----chHHHHHHHHHH-hHHH-----HHH-HHHHHh
Confidence 66666666 99988776655444333322 2334332221111 111222222221 1111 111 111222
Q ss_pred HHHhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 014832 266 FVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (417)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (417)
....|.|.|+++....+.+.......++.+++++..+++.||+|+| +.+..+..+..+........+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~--~~~~~~~~~~~~~~~~~~~~~----------- 300 (392)
T PRK12382 234 VIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGV--KVAIVSLLVETVGLLLLWLAP----------- 300 (392)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCC--eehHHHHHHHHHHHHHHHHcc-----------
Confidence 2334566666552212345555666777889999999999999988 777776666666555443333
Q ss_pred CcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+.+......++.+++.+...+...+...|..|+++|+++.|+.+...+++..++....
T Consensus 301 ----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~ 358 (392)
T PRK12382 301 ----TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLA 358 (392)
T ss_pred ----cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566777888888887888888999999999999999999988888877776543
No 29
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=6.1e-28 Score=226.53 Aligned_cols=315 Identities=15% Similarity=0.136 Sum_probs=215.6
Q ss_pred hhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHH
Q 014832 56 QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILG 134 (417)
Q Consensus 56 ~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~ 134 (417)
..+.+|.+.+|+|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+ ++++++++.+++.|+++
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~ 107 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLG 107 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHhhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHH
Q 014832 135 GIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~ 212 (417)
|++.+...+.. ..++.|+ ++|++. ......+...|..+|+.+ ++.+.++. .+||..+...++..++..
T Consensus 108 Gig~~~~~~~~-~~~~~~~~~~~~~~~----~g~~~~~~~~g~~~g~~~----~~~l~~~~-~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 108 GVGIGIIQAVM-PSVIKRRFQQRTPLV----MGLWSAALMGGGGLGAAI----TPWLVQHS-ETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HhHHHHHhhhh-hHHHHHHccccchhH----HHHHHHHHHHHHHHHHHH----HHHHHHhc-CCHHHHHHHHHHHHHHHH
Confidence 99999988777 6677776 333322 222223333344444444 44444331 179998877665544443
Q ss_pred HHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCC-ChhHHHHHH
Q 014832 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEI-PHGFIFATF 290 (417)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~ 290 (417)
+...+..++++ +++++++ ...++.+++++.+.+.+...+.. ..+.....|.|.++++ +.+. +.+......
T Consensus 178 ~~~~~~~~~~~-~~~~~~~------~~~~~~l~~~~~~~l~~~~~~~~-~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~ 249 (393)
T PRK09705 178 FAWWWQSAREV-ASSHKTT------TTPVRVVFTPRAWTLGVYFGLIN-GGYASLIAWLPAFYIEIGASAQYSGSLLALM 249 (393)
T ss_pred HHHHHHhcCCC-ccccCCC------cCCcccccCHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCChhhhhHHHHHH
Confidence 33322212211 1111110 11234456677766655554433 3444556688988876 2222 246677788
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccch
Q 014832 291 MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWP 370 (417)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 370 (417)
.++.+++++..+++.||.++| +....+..+..+........+. +... ....+.+++.+...|
T Consensus 250 ~i~~i~g~~~~g~l~~r~~~~--~~~~~~~~l~~~~~~~~~~~~~--------------~~~~--~~~~l~g~g~g~~~~ 311 (393)
T PRK09705 250 TLGQAAGALLMPAMARHQDRR--KLLMLALVLQLVGFCGFIWLPL--------------QLPV--LWAMVCGLGLGGAFP 311 (393)
T ss_pred HHHHHHHHHHHHHHHhhccch--HHHHHHHHHHHHHHHHHHHccc--------------hHHH--HHHHHHHHhccchHH
Confidence 899999999999999999887 6666666555554443332221 1111 223456777777778
Q ss_pred hHHHHHhhcCC-cccccccccccccchhHHHHHHHHH
Q 014832 371 SIMKMRSQYIP-EEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 371 ~~~~~~~~~~p-~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
.......+..+ ++++++.+|+.+...+++..++...
T Consensus 312 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~ 348 (393)
T PRK09705 312 LCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWF 348 (393)
T ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777774 6789999999888888776666544
No 30
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=2.5e-28 Score=231.38 Aligned_cols=338 Identities=17% Similarity=0.089 Sum_probs=235.5
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hh-
Q 014832 42 YLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TK- 119 (417)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~- 119 (417)
++...++..+..++..+.+|.+.++++.++.+.|++.+...++..+++++.|+++||+|||+++..+..+.+++.+ ..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~ 101 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL 101 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH
Confidence 3334445666667778888888888999999999999999999999999999999999999999988777776655 43
Q ss_pred ----cCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccC
Q 014832 120 ----HSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (417)
Q Consensus 120 ----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~ 195 (417)
..++++.+++.|++.|++.+...+.. ..++.|+.++. .+....+.... +..+|..+++.+++.+.+..
T Consensus 102 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~-~~~~g~~~g~~l~g~l~~~~-- 173 (417)
T PRK10489 102 NAFLPEPSLLAIYLLGLWDGFFGSLGVTAL-LAATPALVGRE----NLMQAGAITML-TVRLGSVISPALGGLLIAAG-- 173 (417)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHH-hhhhhhccCHH----HHHHHHHHHHH-HHhHHHHhHHHHHHHHHHHH--
Confidence 25678999999999999988776766 55677762111 12222333222 35666677787777777776
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhcccc
Q 014832 196 GPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (417)
Q Consensus 196 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (417)
+|++.|++.++..++..+... ..|+++++++++++..++.++.++.++++|.++...+...+. ... .....+.|.|.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~p~~~ 250 (417)
T PRK10489 174 GVAWNYGLAAAGTFITLLPLL-RLPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLL-TMA-SAVRVLYPALA 250 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHH-hCCCCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHH-HHH-HhHHHhhHHHH
Confidence 899999988777666655544 566554333222222333445667777877765544433222 222 23445788888
Q ss_pred CCCCCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchh
Q 014832 276 PNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGS 352 (417)
Q Consensus 276 ~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (417)
++..+.+ .+.......++.+++.++.+++.||.+++ +.+..+..+..+........+ +.+
T Consensus 251 ~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~--~~l~~~~~~~~~~~~~~~~~~---------------~~~ 313 (417)
T PRK10489 251 DEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG--LLMLLSTLGSFLAVGLFGLMP---------------MWI 313 (417)
T ss_pred HhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc--hHHHHHHHHHHHHHHHHHccc---------------hHH
Confidence 8733333 46667778889999999999999985444 566665555555444433333 445
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 353 LQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 353 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
...+..++.+++.+...+...++..|..|++.||+++|+.+...+++..++....
T Consensus 314 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~ 368 (417)
T PRK10489 314 LAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALL 368 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHH
Confidence 5566777788887777778889999999999999999998887777777766644
No 31
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=1e-27 Score=226.10 Aligned_cols=318 Identities=15% Similarity=0.091 Sum_probs=213.5
Q ss_pred HHHHHhhhhhhhHHH-HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC----
Q 014832 48 LMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS---- 121 (417)
Q Consensus 48 ~~~~~~~~~~~~l~~-l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~---- 121 (417)
+..+..++..|.+|. +.+++|.|+.+.|++.+++.++..+++++.|+++||+||||++..+.++.+++.+ +.++
T Consensus 26 ~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~ 105 (399)
T PRK05122 26 ISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLA 105 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhh
Confidence 445556677888885 6689999999999999999999999999999999999999999999988877655 4443
Q ss_pred ----chHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcc
Q 014832 122 ----PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (417)
Q Consensus 122 ----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~ 194 (417)
.+++.+++.|+++|++.+...+.. ..++.|+ ++|++..+. .+. +...|..+++.+++.+.+..
T Consensus 106 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~----~~~----~~~~g~~~g~~l~~~l~~~~- 175 (399)
T PRK05122 106 AWPVLSLLLLLLGRLLLGIGESLAGTGS-ILWGIGRVGALHTGRVISW----NGI----ATYGALAIGAPLGVLLYHWG- 175 (399)
T ss_pred ccchhHHHHHHHHHHHHHhhHHhhcchH-HHHHHhhcChhhhccchhh----hhh----hhhHHHHHHHHHHHHHHHcc-
Confidence 256789999999999999988877 5566666 444432222 112 24445566666777777777
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccc
Q 014832 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (417)
Q Consensus 195 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (417)
|||..+.+..+..++...... ..|+++++++++ + +.++.+|+ .+.......+ ....+.....|.|.|
T Consensus 176 -g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~----~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~ 242 (399)
T PRK05122 176 -GLAGLGLLIMLLALLGLLLAR-PRPAVPPVKGER----L----PFRRVLGR--VWPYGMGLAL-ASIGFGTIATFITLY 242 (399)
T ss_pred -cHHHHHHHHHHHHHHHHHHHh-cCCCCCCCCccc----h----hHHHHHHH--HHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999998877666554443322 233322211111 1 12222221 1111111111 111222233456666
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHH
Q 014832 275 SPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (417)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (417)
.++....+.+.......++.+++++..+++.||+++| +.+..+..+..+........+ +.+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~---------------~~~~~ 305 (399)
T PRK05122 243 YAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGL--RVAIVSLLVEILGLLLLWLAP---------------SPWMA 305 (399)
T ss_pred HHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHhc---------------cHHHH
Confidence 6542112345556677788899999999999999877 766666666555554444433 44556
Q ss_pred HHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHH
Q 014832 355 LLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 355 ~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
.+..++.|++.+..++.......|..|+++|++++|+.+...+++..++..
T Consensus 306 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 356 (399)
T PRK05122 306 LIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGP 356 (399)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667788888888888888888889999999999999988888877665544
No 32
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=8.5e-28 Score=226.45 Aligned_cols=344 Identities=19% Similarity=0.165 Sum_probs=233.2
Q ss_pred CcchhHHHHHHHHHHHHhhh----hhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHH
Q 014832 36 NSFKNNYLLVYSLMMAGDWL----QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (417)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~----~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 111 (417)
+++++..+..+.+..+..++ ..+..|.+.+++|.++.+.|++.+...++..+++++.|+++||+|||+.+..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 34455555555444444433 35677888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 014832 112 YILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (417)
Q Consensus 112 ~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~ 187 (417)
..++.+ ..++++++.+++.|++.|++.+...+.. ..++.|. ++|++ ..+... .+..+|..+++.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~r~~-------~~~~~~-~~~~~g~~~~~~~~~ 162 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNL-NALVSEYAPKRFRGT-------AVGLMF-CGYPIGAAVGGFLAG 162 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhH-HHHHHHHcCHHhhch-------hHhhHh-hHHHHHHHHHHHHHH
Confidence 999999 8999999999999999999999888887 6788887 23333 233222 225566677777777
Q ss_pred hhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCC---CCCch------------------------hHHHHHHhHH
Q 014832 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD---PSESK------------------------DLLTQFRGAA 240 (417)
Q Consensus 188 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------------~~~~~~~~~~ 240 (417)
.+.+.. +||..|++.++...+..++.....||+++. +++++ +..++.++..
T Consensus 163 ~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (398)
T TIGR00895 163 WLIPVF--GWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVF 240 (398)
T ss_pred HHhhcc--cceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHH
Confidence 777777 999999988766555555544455554221 00000 0000011112
Q ss_pred HHHhcc---chhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCC-ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccch
Q 014832 241 VAIASD---EKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESY 315 (417)
Q Consensus 241 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 315 (417)
+.++++ ++.+.+.+... .....+.....|.|.+.++ +.+. +.+.......++.+++.++.+++.||+++| +.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~ 317 (398)
T TIGR00895 241 KALFQGKTARITVLLWLLYF-MLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR--VT 317 (398)
T ss_pred HHHhcchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH--HH
Confidence 223332 22222222222 2333333455577855544 3322 346666777889999999999999999876 44
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccc
Q 014832 316 MQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (417)
Q Consensus 316 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (417)
... ..+..+.......... +.+......++.+++.+...+...++..|.+|++.|+++.|+.+..
T Consensus 318 ~~~-~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 382 (398)
T TIGR00895 318 ALL-LLLGAVFAVLVGSTLF--------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGI 382 (398)
T ss_pred HHH-HHHHHHHHHHHHHHhh--------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence 333 3333332222222111 3455667778889988888999999999999999999999999998
Q ss_pred hhHHHHHHHHHhc
Q 014832 396 LNIFVCVVLYNVC 408 (417)
Q Consensus 396 ~~~~~~~~~~~~~ 408 (417)
.+++..++.....
T Consensus 383 ~~~g~~~g~~~~G 395 (398)
T TIGR00895 383 GRLGAIIGPILAG 395 (398)
T ss_pred HHHHHHHHHHhHH
Confidence 8898888876643
No 33
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.96 E-value=1.2e-27 Score=225.03 Aligned_cols=334 Identities=16% Similarity=0.045 Sum_probs=230.1
Q ss_pred hhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHH
Q 014832 55 LQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRIL 133 (417)
Q Consensus 55 ~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l 133 (417)
......|.+.+++|.|+.+.|++.++..++..+++++.|+++||+|||+++..+.++.+++.. ++++++++.+++.|++
T Consensus 12 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVL 91 (399)
T ss_pred hhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 345677788899999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHH
Q 014832 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~ 213 (417)
.|++.+...+.. ..++.|+. +.+.+....+..... ..+|..+++.+++.+.+.. +||+.|++.++..++..+
T Consensus 92 ~g~~~~~~~~~~-~~~~~~~~----~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~ 163 (399)
T TIGR00893 92 LGAAEAPFFPGI-ILIVASWF----PASERATAVSIFNSA-QGLGGIIGGPLVGWILIHF--SWQWAFIIEGVLGIIWGV 163 (399)
T ss_pred HHHHHHhhhhHH-HHHHHHhC----CHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHHH
Confidence 999999988887 67888871 111222233333333 5666677777777777777 999999998887776666
Q ss_pred HHHhhccccCCCCCCchhHHH------------------HHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhcccc
Q 014832 214 IILSSWTENYGDPSESKDLLT------------------QFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (417)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (417)
......||+++++++.+++++ +..+..++.+|+|+++...+...+...... ....|.|.|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 242 (399)
T TIGR00893 164 LWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLG-FFLTWFPTYL 242 (399)
T ss_pred HhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHH-HHHHHHHHHH
Confidence 555344444322111100000 011235677888887777666555444444 4555788888
Q ss_pred CCCCCC---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHH--HHHHHHHHhhccCCCCCCCCCcccc
Q 014832 276 PNDEEI---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSV--SLLLPIVTSFLVAPSNVKSGGISFS 350 (417)
Q Consensus 276 ~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (417)
++..+. +.+.......++.+++.++.+++.||+++|.............. ........... .+ +
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~ 311 (399)
T TIGR00893 243 VQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNY-VN----------I 311 (399)
T ss_pred HHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc-ch----------h
Confidence 764333 34666677788899999999999999988821122211111111 11111111100 00 2
Q ss_pred hhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhcC
Q 014832 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCS 409 (417)
Q Consensus 351 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~~ 409 (417)
.+.......+.+++.+ ..+...++..|.+|+++|++++|+.+...+++..++......
T Consensus 312 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~ 369 (399)
T TIGR00893 312 PYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGA 369 (399)
T ss_pred HHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhh
Confidence 2333333333344444 678999999999999999999999999999988888776543
No 34
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.96 E-value=4.2e-27 Score=220.30 Aligned_cols=333 Identities=14% Similarity=0.077 Sum_probs=221.7
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hh
Q 014832 41 NYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TK 119 (417)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~ 119 (417)
.+....+..........+.+|.+.+|+|.|+++.|++.+...++..+++++.|+++||+|||+++..+..+.+++.+ ++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~ 86 (382)
T PRK10091 7 SLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFT 86 (382)
T ss_pred HHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH
Confidence 33334444555555667899999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCch
Q 014832 120 HSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVA 199 (417)
Q Consensus 120 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~ 199 (417)
++++++.+++.|++.|++.+...+.. ..++.|+.+++++. ...+.. ..+..++..+++.+++.+.+.. +||+
T Consensus 87 ~~~~~~~l~~~r~l~G~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~-~~~~~~g~~~g~~l~~~l~~~~--gwr~ 158 (382)
T PRK10091 87 LSSSYLMLAIGRLVSGFPHGAFFGVG-AIVLSKIIKPGKVT----AAVAGM-VSGMTVANLLGIPLGTYLSQEF--SWRY 158 (382)
T ss_pred HhCcHHHHHHHHHHHHhhhHHHHHHH-HHHHHHhCChHHhh----HHHHHH-HHHHHHHHHHhccHHHHHhhhc--cHHH
Confidence 99999999999999999999887776 66777772222111 122222 2345666677777777777777 9999
Q ss_pred hHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCC
Q 014832 200 PFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE 279 (417)
Q Consensus 200 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (417)
.|++.++..++..+......||.+++++++ . ++.. +.+|+++.+.......+.....+ ....|.+.+.++..
T Consensus 159 ~f~~~~~~~~~~~~~~~~~lp~~~~~~~~~---~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 230 (382)
T PRK10091 159 TFLLIAVFNIAVLASIYFWVPDIRDEAKGG---L---REQF-HFLRSPAPWLIFAATMFGNAGVF-AWFSYIKPYMMFIS 230 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcccccC---H---HHHH-HHhcChHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhc
Confidence 999998877666655554566653222111 1 1122 34566666655443333222222 22334555655433
Q ss_pred CC---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHH
Q 014832 280 EI---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLL 356 (417)
Q Consensus 280 ~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (417)
+. ..+.......++.++++++.+++.||+++| +.+..+..+..+..+....... +.+...+
T Consensus 231 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~--~~~~~~~~~~~i~~~~~~~~~~--------------~~~~~~~ 294 (382)
T PRK10091 231 GFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL--RIAAVTDFIIVLALLMLFFFGG--------------MKTASLI 294 (382)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch--hHHHHHHHHHHHHHHHHHHHHh--------------hHHHHHH
Confidence 33 235666788889999999999999999887 7777666665555544333221 2233344
Q ss_pred HHHHHHHhhhccchh-HHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 357 GFCTFEACVGIFWPS-IMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 357 ~~~l~g~~~~~~~~~-~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
...+.+.+.....+. ......+..|++.++.+. .+...+++..+|....
T Consensus 295 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~ 344 (382)
T PRK10091 295 FAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCG 344 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHh
Confidence 444455544433333 334555555666666543 3455677777776643
No 35
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.96 E-value=6.3e-27 Score=219.94 Aligned_cols=332 Identities=16% Similarity=0.119 Sum_probs=227.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHH-HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-
Q 014832 40 NNYLLVYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI- 117 (417)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~l~~-l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~- 117 (417)
+..+...++...+.....|++|. +.+++|+|+.++|++.+...+...+.+++.|+++||+|||+++..+..+.+++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 33344444555555666788874 5688999999999999999999999999999999999999999999999999999
Q ss_pred HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcc
Q 014832 118 TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS 194 (417)
Q Consensus 118 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~ 194 (417)
+.+.++++.+++.|+++|++.+...+.. .+++.|. ++|++ ..+..... ..+|..++|.+++.+. .+
T Consensus 93 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~-------a~~~~~~~-~~~g~~ig~~l~g~l~-~~- 161 (400)
T PRK11646 93 MAIAHEPWLLWLSCILSGLGGTLFDPPR-TALVIKLIRPHQRGR-------FFSLLMMQ-DSAGAVIGALLGSWLL-QY- 161 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCHHHHHH-------HHHHHHHH-HHHHHHHHHHHHHHHH-Hh-
Confidence 9899999999999999999998877776 5677776 33333 33333333 5555566677776666 44
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccc
Q 014832 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (417)
Q Consensus 195 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (417)
+||+.|++.++..++..++.....||.+.++ + .++.++++++++++|+++...+.......... ....+.|.|
T Consensus 162 -g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~ 234 (400)
T PRK11646 162 -DFRLVCATGAVLFVLAAAFNAWLLPAYKLST-V----RTPVREGMTRVLRDKRFVTYVLTLTGYYMLAV-QVMLMLPIM 234 (400)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHhCCcccccc-c----chhhHHHHHHHHcCchHHHHHHHHHHHHHHHH-HHHHhhhhh
Confidence 9999999988776665554443455432211 1 11223456778888887655444333222222 234468888
Q ss_pred cCCCCC--CChhHHHHHHHHHHHHHHHHHHHHHhh-cCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccch
Q 014832 275 SPNDEE--IPHGFIFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (417)
Q Consensus 275 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (417)
.++..+ .+.+...+...+....+....+++.|| .+.+ +.+..+..+..+........+ +.
T Consensus 235 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~--~~~~~~~~~~~~~~~~l~~~~---------------~~ 297 (400)
T PRK11646 235 VNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE--HRLMAGLLIMSLSMFPIGMVS---------------NL 297 (400)
T ss_pred HHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh--HHHHHHHHHHHHHHHHHHHhh---------------hH
Confidence 877322 233555555555555555555666654 4333 455555555555444443333 33
Q ss_pred hHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 352 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
+...+...+.+.+.+...|...++..|..|+++||+++|+.+...+++..+|...
T Consensus 298 ~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l 352 (400)
T PRK11646 298 QQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIG 352 (400)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccc
Confidence 4455556667777777778889999999999999999999999888887777653
No 36
>PRK10133 L-fucose transporter; Provisional
Probab=99.96 E-value=6.8e-27 Score=221.71 Aligned_cols=320 Identities=12% Similarity=0.124 Sum_probs=210.0
Q ss_pred HhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-H---hcCchHHHH
Q 014832 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-T---KHSPQYKIL 127 (417)
Q Consensus 52 ~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~---~~~~~~~~l 127 (417)
......+.+|.+++++|.|+.+.|++.+.+.+++.+++++.|+++||+||||++..+..+++++.+ + ..+++++.+
T Consensus 41 ~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~l 120 (438)
T PRK10133 41 ANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLF 120 (438)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 334457889999999999999999999999999999999999999999999999999999999987 6 468899999
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------------hh-hc
Q 014832 128 MIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLL-------------VD-SF 193 (417)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~-------------~~-~~ 193 (417)
++.|+++|++.+...+.. ..++.|..++.. .+...........+|..+|+.++..+.... .+ ..
T Consensus 121 l~~r~l~G~g~g~~~~~~-~~~v~~~~~~~~-~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~ 198 (438)
T PRK10133 121 LVGLFIIAAGLGCLETAA-NPFVTVLGPESS-GHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLS 198 (438)
T ss_pred HHHHHHHHHHHHHHHhhH-HHHHHHhCChhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHH
Confidence 999999999999998888 567777621111 111111223333334444444433222000 00 00
Q ss_pred ------cCCCchhHHHHH-HHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHH
Q 014832 194 ------SLGPVAPFDAAA-CFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTF 266 (417)
Q Consensus 194 ------~~gw~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (417)
..+||++|+... +..++..++.....||.++++++ +++.++..++.++++|+|+++...+...+...... .
T Consensus 199 ~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~-~ 276 (438)
T PRK10133 199 AYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS-DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQT-A 276 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-cccccchhhhHHHHHhCchHHHHHHHHHHHHHHHH-H
Confidence 016777776433 33333333333344543221111 11111223445678888887665554444333333 3
Q ss_pred HHhhhcccc-CCCCCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 014832 267 VFLWTPALS-PNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNV 342 (417)
Q Consensus 267 ~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (417)
...|.+.|+ ++..+.+ .+.......++.+++++..+++.||+++| +.+..+..+....+.+....+
T Consensus 277 ~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~--~~l~~~~~~~~~~~~~~~~~~-------- 346 (438)
T PRK10133 277 CWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH--KVLAAYALIAMALCLISAFAG-------- 346 (438)
T ss_pred HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHHHHHHcC--------
Confidence 344777774 4444443 36667888889999999999999999888 777666655554444433322
Q ss_pred CCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCccccccccccccc
Q 014832 343 KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (417)
Q Consensus 343 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (417)
+ ...+..+.+.+++.+..+|..++...|..|++ .+++.++..+
T Consensus 347 -------~-~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~ 389 (438)
T PRK10133 347 -------G-HVGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM 389 (438)
T ss_pred -------C-hHHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHhH
Confidence 2 12355677889999999999999999998865 5677766554
No 37
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=3.6e-27 Score=220.51 Aligned_cols=332 Identities=17% Similarity=0.100 Sum_probs=223.2
Q ss_pred HHHHHHHHhhhhhhhHHH-HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHH-HHHHHHHHHH-HhcC
Q 014832 45 VYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT-YCLTYILSCI-TKHS 121 (417)
Q Consensus 45 ~~~~~~~~~~~~~~~l~~-l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~-~~~~~~~~~~-~~~~ 121 (417)
..++..+..+...|.+|. +.+++|.|+.+.|++.+.+.+...+.+++.|+++||+||||.++. +.....++.+ ++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN 84 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc
Confidence 344556666777888885 567899999999999999999999999999999999999887654 5566666777 8889
Q ss_pred chHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchh
Q 014832 122 PQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP 200 (417)
Q Consensus 122 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~ 200 (417)
++++.+++.|++.|.+.+...|.. ..+..|+ +++++.... ..+.. ..+..+|..+++.+++.+.+.. +||+.
T Consensus 85 ~~~~~l~~~~~~~g~~~~~~~p~~-~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~g~~ig~~~~~~l~~~~--~~~~~ 157 (375)
T TIGR00899 85 RNYFLLLVLGVLLSSFASTANPQL-FALAREHADRTGREAVM---FSSVM-RAQISLAWVIGPPLAFWLALGF--GFTVM 157 (375)
T ss_pred chHHHHHHHHHHHHhhhhhhHHHH-HHHHHHHhhhcchhhHH---HHHHH-HHHHhHHHHHhhhHHHHHHHhc--ccHHH
Confidence 999999999999988877777766 4567776 333322111 11222 2224566677777777777777 99999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCC
Q 014832 201 FDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE 280 (417)
Q Consensus 201 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (417)
|++.++..++..++.++..||++++++++++ +.+.++.+++++.+.......+.... ......+.|.+.++..+
T Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 231 (375)
T TIGR00899 158 FLTAALAFVLCGVLVWLFLPSYPRGAPGALT-----RLEVRGLLASRDTRLLFVACTLMWGC-NILYIINMPLLIIHELG 231 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCcccccC-----cchhhhhhcCcchHHHHHHHHHHHHH-HHHHHhhhHHHHHHHcC
Confidence 9999887777666665456665433222111 12234456666665544433332222 22233457777655333
Q ss_pred CC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHH
Q 014832 281 IP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLG 357 (417)
Q Consensus 281 ~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (417)
.+ .+...........++.++.+++.||+++| +.+........+........+ +.+.....
T Consensus 232 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~--~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~ 294 (375)
T TIGR00899 232 LPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR--RLMLLAALAGVAFYTGLAADN---------------SLWALLML 294 (375)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch--hHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHH
Confidence 33 34444455556777889999999999988 666655544443333322222 44555556
Q ss_pred HHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 358 FCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 358 ~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
..+.+++.+...+....+..|..|++ +++++++.+...+++..++....
T Consensus 295 ~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~ 343 (375)
T TIGR00899 295 QLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVG 343 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHH
Confidence 66778888877888888999998865 66999998888888877776543
No 38
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=3.3e-27 Score=221.91 Aligned_cols=335 Identities=12% Similarity=0.066 Sum_probs=221.3
Q ss_pred hhHHHHHHHHHHHHhh----hhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHH
Q 014832 39 KNNYLLVYSLMMAGDW----LQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL 114 (417)
Q Consensus 39 ~~~~~~~~~~~~~~~~----~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~ 114 (417)
|++....+++..+..+ ...+.+|++.+++|+|+++.+++.+...+++.+++++.|++.||+||||++..+.++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i 84 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMIL 84 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3344434444444333 236788899999999999999999999999999999999999999999999999999999
Q ss_pred HHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-h
Q 014832 115 SCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-S 192 (417)
Q Consensus 115 ~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~-~ 192 (417)
+.+ +.++++++.+++.|++.|++.+...+.. ..++.|..++.. +....+.... +..++..++|.+.+.+.+ .
T Consensus 85 ~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~-~~~i~~~~~~~~----r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~ 158 (394)
T PRK03699 85 AVAGLMFSHSLALFSIAMFVLGVVSGITMSIG-TFLITHVYEGKQ----RGSRLLFTDS-FFSMAGMIFPIIAAYLLARS 158 (394)
T ss_pred HHHHHHHcchHHHHHHHHHHHHHhhHhhccch-hHHhhhhcccch----HHHHHHHHHH-HHHHHHHHHHHHHHHHHhcc
Confidence 999 9999999999999999999999887776 567777711111 1112222221 244455666666665543 3
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHhh-ccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhh
Q 014832 193 FSLGPVAPFDAAACFLAIGMVIILSS-WTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWT 271 (417)
Q Consensus 193 ~~~gw~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (417)
. +||++|.+.+++.++..++.++. .|+.+++++ ++.++ ..++ ..+++++...+...+... .+.....|.
T Consensus 159 ~--gw~~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~----~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 228 (394)
T PRK03699 159 I--EWYWVYACIGLVYVAIFILTLFSEFPALGKHAP--KADKP----VAKE-KWGIGVLFLAIAALLYIL-AQLTFISWV 228 (394)
T ss_pred c--cHHHHHHHHHHHHHHHHHHHHhcCCccccccCc--cccCc----cccc-cCChHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 5 89999998887766655544321 222111111 11000 0111 123444444444433333 333455689
Q ss_pred ccccCCCCCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcc
Q 014832 272 PALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (417)
Q Consensus 272 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (417)
|.|+++..+.+ .+...+...++..+++++.+++.||+++| +.+.....+..+........+
T Consensus 229 p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~--~~l~~~~~~~~~~~~~~~~~~-------------- 292 (394)
T PRK03699 229 PEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ--RILTVLAGLALVLMYLFVNTD-------------- 292 (394)
T ss_pred HHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchh--hHHHHHHHHHHHHHHHHHHcC--------------
Confidence 99997644443 36666777788999999999999999887 666655554444333332222
Q ss_pred cchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 349 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+.+...+..++.|++.+..++...+...|..|++ +++..+......+++..++....
T Consensus 293 -~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~ 349 (394)
T PRK03699 293 -DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVT 349 (394)
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHH
Confidence 3334445566777777777788888888877654 56677777777777777776543
No 39
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.96 E-value=7.4e-27 Score=218.55 Aligned_cols=331 Identities=15% Similarity=0.133 Sum_probs=225.4
Q ss_pred HhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHH
Q 014832 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIG 130 (417)
Q Consensus 52 ~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 130 (417)
...+..|.+|.+.+++|.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+ +.++++++.+++.
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 344557899999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHH
Q 014832 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
|++.|++.+...+.. ..++.|..++ +.+....+..... ..+|..+++.+++.+.+.. +||+.|++.++..++
T Consensus 86 ~~l~g~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~-~~~g~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~ 157 (377)
T PRK11102 86 RFLHGLAAAAASVVI-NALMRDMFPK----EEFSRMMSFVTLV-MTIAPLLAPIIGGWLLVWF--SWHAIFWVLALAAIL 157 (377)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHhcCH----HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHH
Confidence 999999999887777 5678887111 1122233333332 5566677777777777777 999999998887777
Q ss_pred HHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCC---ChhHHH
Q 014832 211 GMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI---PHGFIF 287 (417)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 287 (417)
..++.....||+++++++++.+.++..++.++.+|+++.+...+...+.....+ ....+.|.+..+..+. +.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~g~~~ 236 (377)
T PRK11102 158 AAALVFFFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMF-SFLTAGPFVYIELNGVSPQNFGYYF 236 (377)
T ss_pred HHHHHHHhCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHH-HHHHcCHHHHHHHhCCCHHHHHHHH
Confidence 666555466665433322222222334456678888887766555444333333 3333566666553333 346666
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014832 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (417)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (417)
....++.+++.++.+++.||+|+| +.+..+..+..+...........+. +.+...+...+...+.+.
T Consensus 237 ~~~~~~~~~~~~~~g~l~~r~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 303 (377)
T PRK11102 237 ALNIVFLFVMTIINSRFVRRVGAL--NMLRFGLWIQFIMGIWLVVSALLDL-----------GFWALVVGVAAFVGCVSM 303 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHHHHHHHH
Confidence 777888999999999999999887 7666665543333222222211000 223334444444555555
Q ss_pred cchhHHHHHhhcCCcccccccccccccc-hhHHHHHHHH
Q 014832 368 FWPSIMKMRSQYIPEEARSTIMNFFRIP-LNIFVCVVLY 405 (417)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~-~~~~~~~~~~ 405 (417)
..+.......|..| +.++++.++.+.. ..++..++.+
T Consensus 304 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~ 341 (377)
T PRK11102 304 ISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGAL 341 (377)
T ss_pred hhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 55666677788777 6789998886553 2344444444
No 40
>PRK10504 putative transporter; Provisional
Probab=99.96 E-value=6.2e-27 Score=225.54 Aligned_cols=330 Identities=12% Similarity=0.066 Sum_probs=232.3
Q ss_pred hhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHH
Q 014832 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRI 132 (417)
Q Consensus 54 ~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~ 132 (417)
....+.+|.+.+|+|.|+.+.+++.+.+.++..++.++.|+++||+||||++..+..+.+++.+ +.++++++.+++.|+
T Consensus 27 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 106 (471)
T PRK10504 27 TIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARV 106 (471)
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3446788899999999999999999999999999999999999999999999999999999999 889999999999999
Q ss_pred HHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHH
Q 014832 133 LGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (417)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~ 212 (417)
++|++.+...+.. ..++.|..+ .+.+....+..... ..+|..++|.+++.+.++. |||+.|.+......+..
T Consensus 107 l~g~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~-~~~g~~~g~~~~g~l~~~~--gw~~~f~~~~~~~~l~~ 178 (471)
T PRK10504 107 LQGVGGAMMVPVG-RLTVMKIVP----REQYMAAMTFVTLP-GQVGPLLGPALGGLLVEYA--SWHWIFLINIPVGIIGA 178 (471)
T ss_pred HHHhhhHHHHHHH-HHHHHHHcC----HHHHHHHHHHHHHH-HHHHHHhhhHHHHHHHhhc--cHHHHHHHHHHHHHHHH
Confidence 9999999988877 667777722 22222233333333 5667778888888888877 99999999887766666
Q ss_pred HHHHhhccccCCCCCCchhH----------------------------------------------HHHHHh--HHHHHh
Q 014832 213 VIILSSWTENYGDPSESKDL----------------------------------------------LTQFRG--AAVAIA 244 (417)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~--~~~~~~ 244 (417)
+......|+.+.++++.+.. +++.++ .-.+++
T Consensus 179 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (471)
T PRK10504 179 IATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLF 258 (471)
T ss_pred HHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHh
Confidence 55553444432211110000 000000 012366
Q ss_pred ccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHH
Q 014832 245 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV 321 (417)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~ 321 (417)
|||++........+.... +.....+.|.|.++..+.+ .+.......++.+++.++.+++.||+|+| +.+..+..
T Consensus 259 ~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~--~~~~~~~~ 335 (471)
T PRK10504 259 RTRTFSLGLAGSFAGRIG-SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR--RVLVATTL 335 (471)
T ss_pred cccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch--HHHHHHHH
Confidence 777776655544443333 3344446787777533333 35555666677888889999999999988 77766666
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHH
Q 014832 322 VSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVC 401 (417)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~ 401 (417)
+..+...+....... . +.+......++.|++.+...+..+....+.+|++.+++++|+.++..+++..
T Consensus 336 ~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 403 (471)
T PRK10504 336 GLALVSLLFMLVALL-G-----------WYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMS 403 (471)
T ss_pred HHHHHHHHHHhcccc-c-----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHH
Confidence 555554444332210 0 2233344566677888888888899999999999999999999998888877
Q ss_pred HHHHH
Q 014832 402 VVLYN 406 (417)
Q Consensus 402 ~~~~~ 406 (417)
+|...
T Consensus 404 ig~~i 408 (471)
T PRK10504 404 IGVTI 408 (471)
T ss_pred HHHHH
Confidence 76654
No 41
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.96 E-value=2.6e-26 Score=215.32 Aligned_cols=338 Identities=14% Similarity=0.028 Sum_probs=225.1
Q ss_pred hhHHHHHHHHHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-
Q 014832 39 KNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI- 117 (417)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~- 117 (417)
.+.++...++..+.+.......+.+.+|+|.++.+.+++.+.+.+++.+.+++.|+++||+||||+++.+.++.+++.+
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~ 84 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLL 84 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHH
Confidence 3444444555566666665666667789999999999999999999999999999999999999999999999998888
Q ss_pred HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCC
Q 014832 118 TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGP 197 (417)
Q Consensus 118 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw 197 (417)
+.++.+. ++.|+++|++.+...|+. .+++.|+ .+.+.+....+..... ..++..++|.+++.+.+. .|
T Consensus 85 ~~~~~~~---~~~r~l~G~~~a~~~pa~-~a~i~~~----~~~~~~~~a~~~~~~~-~~~~~~~Gp~lgG~l~~~---~~ 152 (393)
T PRK11195 85 MLFGIHP---LLAYGLVGIGAAAYSPAK-YGILTEL----LPGEKLVKANGWMEGS-TIAAILLGTVLGGALADP---HA 152 (393)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHH-HHHHHHH----cCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH---HH
Confidence 7776664 788999999999999988 6789998 2222223334433333 556667777777777654 57
Q ss_pred chhHHHHHHHHHHHHHHHHhhccccCCCCCCch----hHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhcc
Q 014832 198 VAPFDAAACFLAIGMVIILSSWTENYGDPSESK----DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA 273 (417)
Q Consensus 198 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (417)
+..+.+.+...++..+.. ...||+++++++.+ +..++.++..++++++|..........+...... ......|.
T Consensus 153 ~~~~~i~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 230 (393)
T PRK11195 153 EAALAVCALIYLLAALFN-LFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGA-TLRFLVLA 230 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-hcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 777776665544443333 35666543222111 1122333455677888775544333323222222 22223444
Q ss_pred ccCCCCC---CChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccc
Q 014832 274 LSPNDEE---IPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFS 350 (417)
Q Consensus 274 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (417)
|.++..+ .+.|.......++.+++.+..+++.||.+++ +.+..+.. ...........+ +
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~--~~~~~g~~-~~~~~~~~~~~~---------------~ 292 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL--RVLPAGIL-MGLVVLLMALQH---------------S 292 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--chHHHHHH-HHHHHHHHHHHh---------------H
Confidence 4444222 2457777888889999999999999987766 55555432 222222222222 3
Q ss_pred hhHHHHHHHHHHHhhhccchhHHHHHhhcCCccc-ccccccccccchhHHHHHHHHHhc
Q 014832 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA-RSTIMNFFRIPLNIFVCVVLYNVC 408 (417)
Q Consensus 351 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~-r~~~~g~~~~~~~~~~~~~~~~~~ 408 (417)
.+......++.|++.+...+..++..+|..|++. +|++.++.++..+++..++.....
T Consensus 293 ~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~ 351 (393)
T PRK11195 293 LLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYS 351 (393)
T ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHH
Confidence 4555566777888888878888888888877665 799999999999988777766543
No 42
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.96 E-value=1.6e-26 Score=223.31 Aligned_cols=346 Identities=14% Similarity=0.104 Sum_probs=217.8
Q ss_pred cchhHHHHHHHHHHHHhhhh----hhhHHHHHHhc--------CCCcchHHHHHHHHHHHHhhhhccccccccccCchHH
Q 014832 37 SFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTY--------GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA 104 (417)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~--------g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~ 104 (417)
+++++......+..+.++++ .+..|.+.+++ +.++.+.+++.+++.++..++++++|+++||+||||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 44555555556666666665 45556666665 8889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HhcC------------chHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHH
Q 014832 105 CVTYCLTYILSCI-TKHS------------PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFS 168 (417)
Q Consensus 105 ~~~~~~~~~~~~~-~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~ 168 (417)
+..+..+..++.+ ++++ +.++.+++.|+++|++.|...+.. .++++|+ ++|++..+...
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~-~~~i~e~~~~~~rg~~~~~~~---- 162 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLS-PMYIAEIAPAHIRGKLVSFNQ---- 162 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHH-HHHHHhhCChhhhhHHHHHHH----
Confidence 9999999988887 6653 225678899999999999999988 7799999 44554333322
Q ss_pred HHHHHHHHHHHHHHhhhhhh--------hhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCC---CCCchhH---H-
Q 014832 169 KAIFLGNGLVAILSGLFGNL--------LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD---PSESKDL---L- 233 (417)
Q Consensus 169 ~~~~~g~~~g~~l~~~~~~~--------~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~- 233 (417)
.+ ..+|..+++.++.. ..+.. |||++|++.+++.++..+..+ ..||+++. +++.++. .
T Consensus 163 ~~----~~~G~~~~~~~~~~~~~~~~~~~~~~~--gWr~~f~~~~~~~~~~~~~~~-~l~~s~~~l~~~~~~~~~~~~~~ 235 (479)
T PRK10077 163 FA----IIFGQLVVYFVNYFIARSGDASWLNTD--GWRYMFASEAIPALLFLMLLY-FVPETPRYLMSRGKQEQAEGILR 235 (479)
T ss_pred HH----HHHHHHHHHHHHHHHhccCcccccccC--ChHHHHHHHHHHHHHHHHHHH-cCCCCcHHHHHcCCHHHHHHHHH
Confidence 22 33333333333222 12334 999999998877766655444 67776431 1111110 0
Q ss_pred --------HHHHhHHHHHhc-----cchhHHH-------HHHH-HHHHhHHHHHHHhhhccccCC-CCCCC-hhHHHHHH
Q 014832 234 --------TQFRGAAVAIAS-----DEKIALL-------GAIQ-SLFEGSMYTFVFLWTPALSPN-DEEIP-HGFIFATF 290 (417)
Q Consensus 234 --------~~~~~~~~~~~~-----~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~ 290 (417)
++..++.++..+ .++.+.. .... .+.+...+.....|.|.+.++ +.+.+ ........
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~ 315 (479)
T PRK10077 236 KIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIV 315 (479)
T ss_pred HHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHH
Confidence 000011111111 1111110 0011 111112222334456766554 33323 23444566
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhc-cc
Q 014832 291 MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI-FW 369 (417)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~ 369 (417)
++..+++.++.+++.||+||| +.+..+..+.+++.+........+. .........++.+++.+. ..
T Consensus 316 ~~~~~i~~~~~g~l~dr~g~r--~~~i~~~~~~~v~~~~l~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 382 (479)
T PRK10077 316 GVINLTFTVLAIMTVDKFGRK--PLQIIGALGMAIGMFSLGTAFYTQA-----------PGIVALLSMLFYVAAFAMSWG 382 (479)
T ss_pred HHHHHHHHHHHHHHHHHhcCh--HHHHHhHHHHHHHHHHHHHHHhcCc-----------ccHHHHHHHHHHHHHHhcccc
Confidence 778899999999999999988 7777777776666655543321100 112233344444554443 33
Q ss_pred hhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 370 PSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
|..+.++.|.+|++.|++++|+.+...+++..++....
T Consensus 383 ~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~ 420 (479)
T PRK10077 383 PVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTF 420 (479)
T ss_pred chhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77889999999999999999999988888888775443
No 43
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=2.7e-26 Score=216.21 Aligned_cols=346 Identities=12% Similarity=0.118 Sum_probs=219.5
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHH
Q 014832 36 NSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (417)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~ 115 (417)
++.........++.....+...++++++.+|+|.|+++.|++.+.+.++..+++++.|+++||+||||++..+..+.+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~ 91 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVG 91 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 33333444444556666666777888888999999999999999999999999999999999999999999999988887
Q ss_pred HH-Hh---c-CchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHH-HHHhhhh
Q 014832 116 CI-TK---H-SPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVA-ILSGLFG 186 (417)
Q Consensus 116 ~~-~~---~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~-~l~~~~~ 186 (417)
.+ +. . .++++.+++.|++.|++.+...+.. ...+.++ ++|++..+. .... ..+|. .+++.++
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~-~~~~~~~~~~~~~g~~~g~-------~~~~-~~~g~~~~g~~~~ 162 (402)
T TIGR00897 92 HAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSF-LVWVVYNTKQDNLSSAVGW-------FWAV-YSIGIGVFGSYYS 162 (402)
T ss_pred HHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHH-HHHHHHhCCHHHHHHHHHH-------HHHH-HHHHHHHHHHHHH
Confidence 66 52 3 3578888999999999988776665 3455554 444443333 2222 34443 4566667
Q ss_pred hhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCC-CCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHH
Q 014832 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP-SESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYT 265 (417)
Q Consensus 187 ~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (417)
+.+.+.. ||+..++.......+..++.....++.++++ ++++++.++..+..++++|+|+++...+...+.. ....
T Consensus 163 ~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 239 (402)
T TIGR00897 163 SYAIPAF--GEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINT-IGLF 239 (402)
T ss_pred Hhccccc--chHHHHHHHHHHHHHHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHH-HHHH
Confidence 7766666 8666555444333333333332333321111 1111112223345677889998887766554433 3334
Q ss_pred HHHhhhccccCC-CCCC-ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHH-HHHHHHHHHHHHHHHHhhccCCCCC
Q 014832 266 FVFLWTPALSPN-DEEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQ-IVFVVSSVSLLLPIVTSFLVAPSNV 342 (417)
Q Consensus 266 ~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (417)
....|.|.|.++ +.+. +.+.......++..++.+..|+++||+++| +.+. .......+........+.....
T Consensus 240 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~--~~~~~~~~l~~~~~~~~l~~~~~~~~~--- 314 (402)
T TIGR00897 240 GFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWM--NTVRWFGGVGCGIFTLALYYIPQHFGH--- 314 (402)
T ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHHHHHHHHHHHccCC---
Confidence 455688988866 2222 234555667788999999999999999877 5443 2222222222222221110000
Q ss_pred CCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 343 KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 343 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+.+...+..++.|++.+...+ ......|..| ++|++++|+.+...+++..++....
T Consensus 315 -------~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~ 370 (402)
T TIGR00897 315 -------SFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIA 370 (402)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566677777766444 3456667654 5799999999999998887777654
No 44
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=2.2e-26 Score=216.23 Aligned_cols=339 Identities=17% Similarity=0.150 Sum_probs=210.9
Q ss_pred CCcchhHHHHHHHHHHHHhhhhhhhHHH-HHHhcCCCcchHHHHHHHHHH-HHhhhhccccccccccCchHHH-HHHHHH
Q 014832 35 FNSFKNNYLLVYSLMMAGDWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFG-SSMLFGTIVGSLADKQGRKRAC-VTYCLT 111 (417)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~g~s~~~~g~~~s~~~~-~~~~~~~~~G~l~Dr~Grr~~~-~~~~~~ 111 (417)
.+...+..+...++......+..|.+|. +.+|+|.|++++|++.+...+ +..++.++.|+ +||+||||.+ ..+.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~ 91 (393)
T PRK15011 13 FDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLL 91 (393)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHH
Confidence 3344455556666667777777888884 568999999999999877655 55555555555 9999999875 455666
Q ss_pred HHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 014832 112 YILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLL 189 (417)
Q Consensus 112 ~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~ 189 (417)
.+++.. .+++++++.+++.+.+.|...+...|.. ..+..|+ ++|++.... ++.....+..+|..++|.+++.+
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~lg~~~g~~i~~~l 166 (393)
T PRK15011 92 GVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQM-FALAREHADKTGREAVM----FSSFLRAQVSLAWVIGPPLAYAL 166 (393)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHhhhccchHHH----HHHHHHHHHHHHHHHhhHHHHHH
Confidence 667777 8889999887766555554445555666 5566766 444432211 11122233556678888888888
Q ss_pred hhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccch-hHHHHHHHHHHHhHHHHHHH
Q 014832 190 VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEK-IALLGAIQSLFEGSMYTFVF 268 (417)
Q Consensus 190 ~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 268 (417)
.+++ |||..|++.++..++..+......||+++++++.+++. + ...++++ .+.......... ..+....
T Consensus 167 ~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 236 (393)
T PRK15011 167 AMGF--SFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATGTL----E---APRRNRRDTLLLFVICTLMW-GTNSLYI 236 (393)
T ss_pred HHhc--ChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccccc----c---ccccccccHHHHHHHHHHHH-HHHHHHH
Confidence 7777 99999999988777666665545666543322211110 1 1112322 222222222222 2333344
Q ss_pred hhhccccCCCCCCCh---hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 014832 269 LWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (417)
Q Consensus 269 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (417)
.+.|.|.++..+.+. +.......+..+++.++.|+++||+++| +.+..+.....+.........
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~----------- 303 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR--FLMRVAAVAGVCFYAGMLMAH----------- 303 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH--HHHHHHHHHHHHHHHHHHHHh-----------
Confidence 578888876444433 4555555567788899999999999988 665554444333332222222
Q ss_pred CcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+.+..+....+.++..+...+.......|..|++ |++++++.+...+++..++....
T Consensus 304 ----~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~ 360 (393)
T PRK15011 304 ----SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLA 360 (393)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555666665666677888999865 99999998887888777776543
No 45
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.96 E-value=9.3e-26 Score=212.85 Aligned_cols=325 Identities=14% Similarity=0.143 Sum_probs=214.1
Q ss_pred hhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHH
Q 014832 55 LQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRIL 133 (417)
Q Consensus 55 ~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l 133 (417)
+..|.+|.+.+++|.+.++.++..+++.+++.+++++.|+++||+|||+++..+..+.+++.+ +.++++++.++++|++
T Consensus 34 ~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 113 (413)
T PRK15403 34 LIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFI 113 (413)
T ss_pred hhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 447888899999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHH
Q 014832 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~ 213 (417)
+|++.+...+.. ..++.|..++. ......+..... ..+++.++|.+++.+.+.. |||+.|++.++..++..+
T Consensus 114 ~Gi~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~g~~lg~~l~~~~--gw~~~f~~~~~~~~i~~~ 185 (413)
T PRK15403 114 QGTSICFIATVG-YVTVQEAFGQT----KGIKLMAIITSI-VLVAPIIGPLSGAALMHFV--HWKVLFAIIAVMGLIAFV 185 (413)
T ss_pred HHHHHHHHHHHH-HHHHHHhcCHH----HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHH
Confidence 999988655554 55676762111 112223322322 5556677777777777766 999999999888777766
Q ss_pred HHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCCh---hHHHHHH
Q 014832 214 IILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATF 290 (417)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 290 (417)
..++..||++++++++. ..++..+++++++|||+++...+...+.....+ ....+.|.++++..+.+. +......
T Consensus 186 ~~~~~lp~~~~~~~~~~-~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~-~~~~~~P~~l~~~~g~s~~~~gl~~~~~ 263 (413)
T PRK15403 186 GLLLAMPETVKRGAVPF-SAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMM-SWVAVSPVILIDAGGMTTSQFAWTQVPV 263 (413)
T ss_pred HHHHhCCCCccccCCCC-ChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH-HHHHhChHHHHHhcCCCHHHHHHHHHHH
Confidence 65556777654322221 122334567888999998887776555444444 344468988887544443 4444455
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccch
Q 014832 291 MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWP 370 (417)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 370 (417)
..+..++..+.+++.+|..++ +.......+..++..+.........+ +.+..+...++.+++.+...|
T Consensus 264 ~~~~~i~~~l~~~~~~~~~~~--~~~~~~~~~~~ig~~l~~~~~~~~~~----------~~~~~~~~~~l~~~G~~~~~p 331 (413)
T PRK15403 264 FGAVIVANAIVARFVKDPTEP--RFIWRAVPIQLVGLALLIVGNLLWPH----------VWLWSVLGTSLYAFGIGLIFP 331 (413)
T ss_pred HHHHHHHHHHHHHHhccCCch--hHHHHHHHHHHHHHHHHHHHHHHccc----------cHHHHHHHHHHHHHHHHHHhH
Confidence 567777777777766544333 33322222222222222111100000 223345677778888888777
Q ss_pred hHHHHHhhcCCcccccccccccccchhHHHHH
Q 014832 371 SIMKMRSQYIPEEARSTIMNFFRIPLNIFVCV 402 (417)
Q Consensus 371 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~ 402 (417)
......-+.. +..+|++.++.+.....+...
T Consensus 332 ~~~~~al~~~-~~~~G~a~a~~~~~~~~~~~~ 362 (413)
T PRK15403 332 TLFRFTLFSN-NLPKGTVSASLNMVILMVMAV 362 (413)
T ss_pred HHHHHHhccC-CCCCcHHHHHHHHHHHHHHHH
Confidence 7775333222 223688877766655444333
No 46
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.96 E-value=4.9e-27 Score=224.21 Aligned_cols=348 Identities=10% Similarity=0.047 Sum_probs=234.2
Q ss_pred cCCcchhHHHHHHHHHHHHhhh----hhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHH
Q 014832 34 AFNSFKNNYLLVYSLMMAGDWL----QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC 109 (417)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~ 109 (417)
+...++|.++..+++....... ...++|.+.+++|.|+++.+++.+.+.++..++.++.|+++||+|||++++.+.
T Consensus 12 ~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~ 91 (455)
T TIGR00892 12 PDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGG 91 (455)
T ss_pred CCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhH
Confidence 4556777777666655443222 256788899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HhcCchHHHHHH-HHHHHHHHhhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 014832 110 LTYILSCI-TKHSPQYKILMI-GRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (417)
Q Consensus 110 ~~~~~~~~-~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~ 185 (417)
++..++.+ ++++++++.+++ .|++.|++.+...+.. ..++.++ ++|++ ..+.... +..+|..++|.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~-~~~~~~~~~~~r~~-------a~g~~~~-~~~~g~~~~~~l 162 (455)
T TIGR00892 92 LLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPS-LTMLGKYFYRRRPL-------ANGLAMA-GSPVFLSTLAPL 162 (455)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHH-HHHHHHHHHhhHHH-------HHHHHHh-cccHHHHHHHHH
Confidence 99999999 999999988865 5799999988765555 4566666 33332 3333332 356666777777
Q ss_pred hhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCC----CCC--C----c-h-hH------HHHHHhH-HHHHhcc
Q 014832 186 GNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG----DPS--E----S-K-DL------LTQFRGA-AVAIASD 246 (417)
Q Consensus 186 ~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~----~~~--~----~-~-~~------~~~~~~~-~~~~~~~ 246 (417)
++.+.+.+ |||++|++.+++.++..+......++++. +++ + . . ++ .++.++. ..+++++
T Consensus 163 ~~~l~~~~--gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (455)
T TIGR00892 163 NQYLFESF--GWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTH 240 (455)
T ss_pred HHHHHHHh--ChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcC
Confidence 77777777 99999999988766555443322221110 000 0 0 0 00 0000110 1246677
Q ss_pred chhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCC-CChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHH--
Q 014832 247 EKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEE-IPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVV-- 322 (417)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~-- 322 (417)
|.++.......+.....+ ....|.|.|.++ +.+ .+.+...+..+++.++++++.+++.||...++++........
T Consensus 241 ~~~~~~~~~~~l~~~~~~-~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFF-APIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHcc-chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 877766655444333333 344467777765 222 234666677788889999999999998433322333332222
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHH
Q 014832 323 SSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCV 402 (417)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~ 402 (417)
..++.+...... +.+..++..++.|++.+...+...+.+.|.+|++++++++|+.+...+++..+
T Consensus 320 ~~l~~ll~~~~~---------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i 384 (455)
T TIGR00892 320 NGLTHLLCALAG---------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLI 384 (455)
T ss_pred HHHHHHHHHHhc---------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHc
Confidence 222222222222 44566677888899988888999999999999999999999999999999888
Q ss_pred HHHHhc
Q 014832 403 VLYNVC 408 (417)
Q Consensus 403 ~~~~~~ 408 (417)
+.....
T Consensus 385 gp~i~G 390 (455)
T TIGR00892 385 GPPLAG 390 (455)
T ss_pred ccccee
Confidence 887654
No 47
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.96 E-value=1.6e-26 Score=220.92 Aligned_cols=341 Identities=10% Similarity=0.042 Sum_probs=209.9
Q ss_pred CcchhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHH
Q 014832 36 NSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (417)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 111 (417)
++++|..+..+++.......+ ...+|.+.++ |+|+.+.|++.+...+++.+++++.|+++||+|||+++..+.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~ 102 (452)
T PRK11273 24 RRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 102 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHH
Confidence 444555544444444333332 4566777777 99999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhcC----chHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHH-HHH
Q 014832 112 YILSCI-TKHS----PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVA-ILS 182 (417)
Q Consensus 112 ~~~~~~-~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~-~l~ 182 (417)
.+++.+ +++. .+++.+++.|++.|++.+...+.. ...+.|+ ++|++ ..+... .+..+|. ..+
T Consensus 103 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~-~~~~~~~~~~~~r~~-------~~~~~~-~~~~~g~~~~~ 173 (452)
T PRK11273 103 AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPC-GRTMVHWWSQKERGG-------IVSVWN-CAHNVGGGLPP 173 (452)
T ss_pred HHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHH-HHHHHHhCChHHHHH-------HHHHHH-HHHHhhhhHHH
Confidence 998888 7765 378889999999999999887766 4466666 33333 222221 2233332 233
Q ss_pred hhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCC---CCch-------------hHHHHHHhH-HHHHhc
Q 014832 183 GLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---SESK-------------DLLTQFRGA-AVAIAS 245 (417)
Q Consensus 183 ~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------~~~~~~~~~-~~~~~~ 245 (417)
+.++....... +||+.|++.+++.++..++.....||++++. ++++ ++.++.++. .+.++|
T Consensus 174 ~l~~~~~~~~~--gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (452)
T PRK11273 174 LLFLLGMAWFN--DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLP 251 (452)
T ss_pred HHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHc
Confidence 33322222233 8999999988776665555544555543210 0000 000001111 123667
Q ss_pred cchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHH-HHHH
Q 014832 246 DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQ-IVFV 321 (417)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~-~~~~ 321 (417)
++.++...+...+.....+ ....|.|.|+++..+.+ .+.......++.+++.++.|+++||+++++++... ....
T Consensus 252 ~~~~~~~~l~~~~~~~~~~-~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~ 330 (452)
T PRK11273 252 NKLLWYIAIANVFVYLLRY-GILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMT 330 (452)
T ss_pred ChHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 8888877766655554444 45558999998744333 35555677788899999999999998543223222 2222
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHH
Q 014832 322 VSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVC 401 (417)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~ 401 (417)
+..+.......... . +.+...+.....+............+..|.+|++.||+++|+.+...+++..
T Consensus 331 l~~~~~~~~~~~~~--~-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ 397 (452)
T PRK11273 331 LVTIATIVYWLNPA--G-----------NPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGS 397 (452)
T ss_pred HHHHHHHHHHHhcc--c-----------ChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHH
Confidence 22222222211110 0 2222333334444433222333455678999999999999998887777654
Q ss_pred H
Q 014832 402 V 402 (417)
Q Consensus 402 ~ 402 (417)
+
T Consensus 398 ~ 398 (452)
T PRK11273 398 V 398 (452)
T ss_pred H
Confidence 3
No 48
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=3.9e-26 Score=215.42 Aligned_cols=328 Identities=15% Similarity=0.130 Sum_probs=224.7
Q ss_pred HhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHH
Q 014832 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIG 130 (417)
Q Consensus 52 ~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 130 (417)
......|.+|.+.+++|.|+++.|+..+++.++..++++++|+++||+|||+++..+..+..++.+ +.++++++.+++.
T Consensus 21 ~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 100 (401)
T PRK11043 21 ATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVL 100 (401)
T ss_pred HHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 334456778888999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHH
Q 014832 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
|+++|++.+...+.. ..++.|+.++.+ .....+..... ..++..++|.+++.+.+.+ +||+.|++.++..++
T Consensus 101 ~~l~G~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~g~~i~~~l~~~~--g~~~~~~~~~~~~~~ 172 (401)
T PRK11043 101 RFVQAVGVCSAAVIW-QALVIDRYPAQK----ANRVFATIMPL-VALSPALAPLLGAWLLNHF--GWQAIFATLFAITLL 172 (401)
T ss_pred HHHHHhhhHHHHHHH-HHHHHHhcCcHH----HHHHHHHHHHH-HHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHH
Confidence 999999988776665 457777622222 11122322222 4566677788888887777 999999998877776
Q ss_pred HHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCC---hhHHH
Q 014832 211 GMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIF 287 (417)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 287 (417)
..+... ..+|++++++++ +.++++++++|+++.+...+...+.....+ ....+.|.+.++ .+.+ .+...
T Consensus 173 ~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~-~g~s~~~~g~~~ 244 (401)
T PRK11043 173 LILPTL-RLKPSKKARKQS-----QDALTFKQLLKSKTYLGNVLIFAACSAAFF-AWLTGSPFILEQ-MGYSPADIGLSY 244 (401)
T ss_pred HHHHHH-HcCCCCCccccc-----hHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHHHHhHHHHHH-cCCCHHHHHHHH
Confidence 665554 344433222111 123456778888877655444333333222 334467877765 2333 35555
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014832 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (417)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (417)
....++.+++.+..+++.||+++| +..........++............+ +.+.......+.+++.+.
T Consensus 245 ~~~~~~~~~g~~~~~~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 312 (401)
T PRK11043 245 VPQTIAFLVGGYGCRAALQKWGGE--QLLPWLLVLFAVSVIAIWLASLLSHP----------SLVPLLIPFCVMAAANGA 312 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHHHHHHHHHhccC----------cHHHHHHHHHHHHHHHHH
Confidence 566678889999999999999876 55444443333333222221110000 334445556677888888
Q ss_pred cchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhc
Q 014832 368 FWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVC 408 (417)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~ 408 (417)
.++...+...|..|+ +++++.|+.+.....+...+.....
T Consensus 313 ~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~~~~~~g 352 (401)
T PRK11043 313 IYPIVVAQALRPFPQ-ATGKAAALQNTLQLGLCFLASLLVS 352 (401)
T ss_pred HHHHHHHHHhhhCcc-cChHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888764 6999999988766666555555443
No 49
>PRK10054 putative transporter; Provisional
Probab=99.96 E-value=3e-26 Score=215.02 Aligned_cols=339 Identities=14% Similarity=0.062 Sum_probs=225.8
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHH
Q 014832 36 NSFKNNYLLVYSLMMAGDWLQGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL 114 (417)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~ 114 (417)
+|..+.+....++.....+...|++| .+.+++|+|+.++|++.+.+.++..+++++.|+++||+|||+++.++.+...+
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~ 85 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFAS 85 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHH
Confidence 33344444445555666666678877 45578999999999999999999999999999999999999999999999999
Q ss_pred HHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Q 014832 115 SCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF 193 (417)
Q Consensus 115 ~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~ 193 (417)
+.+ ..++++++.+++.|.+.|.+.+...+.. ..+..|.. ..+.+....+..... ..+|..++|.+++.+.+ .
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~----~~~~~~~~~g~~~~~-~~lg~~igp~l~~~l~~-~ 158 (395)
T PRK10054 86 GFIAIPLVNNVTLVVLFFALINCAYSVFSTVL-KAWFADNL----SSTSKTKIFSLNYTM-LNIGWTVGPPLGTLLVM-Q 158 (395)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhc----CHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-h
Confidence 888 9899999999999999888877766666 55666651 111222233333333 45566777777776654 4
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhcc
Q 014832 194 SLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA 273 (417)
Q Consensus 194 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (417)
+|+.+|++.++..++..++.....|+++++++++++ + ..+.++.+|+|+++...+...+...... ....+.+.
T Consensus 159 --g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~ 231 (395)
T PRK10054 159 --SINLPFWLAAICSAFPLVFIQIWVQRSEKAIATETG--S--VWSPSVLLQDKALLWFTCSGFLASFVSG-AFASCISQ 231 (395)
T ss_pred --ccCcHHHHHHHHHHHHHHHHHHHHhccccccccchh--h--hhhhhhhccCceehHHHHHHHHHHHHHH-HhhhhHHH
Confidence 899999998877777655554345554332221111 1 1223667888888776665544443322 12223444
Q ss_pred ccCC--CCCCCh---hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcc
Q 014832 274 LSPN--DEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (417)
Q Consensus 274 ~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (417)
|..+ +.+.+. +.......+.........+++.||.++| +.+..+..+..+..........
T Consensus 232 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~------------- 296 (395)
T PRK10054 232 YVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR--PLMTAGTLCFVIGLVGFIFSGN------------- 296 (395)
T ss_pred HHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch--hHHHHHHHHHHHHHHHHHHcch-------------
Confidence 4322 222222 4444555555666678889999998877 6666666555555444433221
Q ss_pred cchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHH
Q 014832 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 349 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
+.+...+...+.+++.+...|...+.+.+..|++.|+++.+..+. .++|..+|..
T Consensus 297 -~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~-~~~G~~~Gp~ 351 (395)
T PRK10054 297 -SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSL-GWLGAAINPL 351 (395)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHHH-HHHHHHHHHH
Confidence 334555667788888888788889999999999999999886542 3345555554
No 50
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=1.6e-26 Score=216.24 Aligned_cols=331 Identities=12% Similarity=0.062 Sum_probs=231.0
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHH-HHHHHH-HH-Hh
Q 014832 43 LLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC-LTYILS-CI-TK 119 (417)
Q Consensus 43 ~~~~~~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~-~~~~~~-~~-~~ 119 (417)
....+......+...|++|.+.+|+|.|.+++|++.+.+.+...++++++|+++||+|||+...... ....+. .. +.
T Consensus 10 ~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~ 89 (382)
T TIGR00902 10 ALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSA 89 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555677789999999999999999999999999999999999999999999854332221 111111 23 55
Q ss_pred cCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCc
Q 014832 120 HSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPV 198 (417)
Q Consensus 120 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~ 198 (417)
.+++++.+++.|+++|.+.+...|.. .++..|+ ++|++..+.. ... .++|.+++|.+++.+.+.+ |||
T Consensus 90 ~~~~~~~l~~~~~l~~~~~~~~~p~~-~al~~~~~~~~~~~~g~~-------~~~-~slG~~~g~~l~g~l~~~~--g~~ 158 (382)
T TIGR00902 90 GAHNAWLLFIAIGLFALFFSAGMPIG-DALANTWQKQFGLDYGKV-------RLI-GSAAFIIGSALFGGLIGMF--DEQ 158 (382)
T ss_pred hhhhHHHHHHHHHHHHHHHccchhHH-HHHHHHHHHHcCCCccHH-------HHH-HHHHHHHHHHHHHHHHHHc--Chh
Confidence 67899999999999999988877877 4566555 4445433332 222 4566677888888888888 999
Q ss_pred hhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC-
Q 014832 199 APFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN- 277 (417)
Q Consensus 199 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 277 (417)
..|.+.+....+.. ......|+.++++++++ ++++..++.++++|+|+++...+...+.+.... ....|.|.|.++
T Consensus 159 ~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~l~~~ 235 (382)
T TIGR00902 159 NILAILTAGLAFML-IGFLIKPTIPPKDAIPE-DESQGDSAFIALLKNPMNLRFLAAVCLIQGAHA-AYYGFSAIYWQAA 235 (382)
T ss_pred HHHHHHHHHHHHHH-HHHHcCCCCCCCccccc-cccccchhHHHHHcChHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHC
Confidence 99988765533322 22222232222211111 111123356788899998888776666555544 344478888876
Q ss_pred CCCC-ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHH
Q 014832 278 DEEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLL 356 (417)
Q Consensus 278 ~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (417)
+.+. ..|.......++.+++....+++.||+|.| +.+..+.....+........+ +.+..+.
T Consensus 236 g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~--~~l~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 298 (382)
T TIGR00902 236 GISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR--DLLLISAIACVGRWAIIGAIE---------------AFPLIFL 298 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH--HHHHHHHHHHHHHHHHHHhHh---------------hHHHHHH
Confidence 2222 246666777788899999999999999887 777777777777766665555 6677788
Q ss_pred HHHHHHHhhhccchhHHHHHhhcCCcccccccccccc-cchhHHHHHHHH
Q 014832 357 GFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR-IPLNIFVCVVLY 405 (417)
Q Consensus 357 ~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~~~~~~~~~~~ 405 (417)
...+.++..+...+....++.+. |+++|+++.++.+ +...++..++.+
T Consensus 299 ~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~ 347 (382)
T TIGR00902 299 LQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTA 347 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999998 9999999999875 344555554444
No 51
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=4e-26 Score=221.45 Aligned_cols=349 Identities=14% Similarity=0.065 Sum_probs=218.8
Q ss_pred CCcchhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHH
Q 014832 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (417)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 110 (417)
.++.+|+.+....+..+.+.++ .+.+|.+.+++|.|+.+.+++.+...++..+++++.|+++||+|||+++..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 93 (496)
T PRK03893 14 LNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIV 93 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 3445555555555554444433 677888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 014832 111 TYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLL 189 (417)
Q Consensus 111 ~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~ 189 (417)
+.+++.+ +.++++++.+++.|++.|++.+...+.. ..++.|. ...+.+....+... .+..+|..+++.+.+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~-~~~~~~~----~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 94 LFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSS-ATYVIES----WPKHLRNKASGFLI-SGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH----cCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999999999999999888877 5677777 11111222223222 23566777778777777
Q ss_pred hhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCC--CchhHHHHHHh-------HHHH-------------Hhc--
Q 014832 190 VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS--ESKDLLTQFRG-------AAVA-------------IAS-- 245 (417)
Q Consensus 190 ~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~~-------------~~~-- 245 (417)
.+.+ +||+.|++..+..++.... ....||+++.++ +.++..++..+ .... .+.
T Consensus 168 ~~~~--~w~~~f~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (496)
T PRK03893 168 VPVW--GWRALFFIGILPIIFALWL-RKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGN 244 (496)
T ss_pred hccC--CHHHHHHHHHHHHHHHHHH-HHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhh
Confidence 7777 9999998765444433322 234455322111 00000000000 0000 000
Q ss_pred ----------------------------cchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCC---hhHHHHHHHHHH
Q 014832 246 ----------------------------DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLAS 294 (417)
Q Consensus 246 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 294 (417)
++..........+...........+.|.|+++..+.+ .+...+...++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~ 324 (496)
T PRK03893 245 LQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGA 324 (496)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHH
Confidence 0000000000000000111123346888886533333 366777788899
Q ss_pred HHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHH
Q 014832 295 MLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMK 374 (417)
Q Consensus 295 ~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 374 (417)
++++++.|++.||+++| +.+..+..+..+..+....... . +.+......++.+.......+...+
T Consensus 325 ~~g~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (496)
T PRK03893 325 AVGCCVGGFLGDWLGTR--KAYVCSLLISQLLIIPVFAIGG--A-----------NVWVLGLLLFFQQMLGQGISGLLPK 389 (496)
T ss_pred HHHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHhhccc--c-----------HHHHHHHHHHHHHHHhcccchhhHH
Confidence 99999999999999888 6666555444433332222210 0 2222223333333322233566778
Q ss_pred HHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 375 MRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 375 ~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+..|.+|+++|++++|+.+...+++..++....
T Consensus 390 ~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~ 422 (496)
T PRK03893 390 LIGGYFDTEQRAAGLGFTYNVGALGGALAPILG 422 (496)
T ss_pred HHHhhCCHHHhhcccchhhhhhhHHHHHHHHHH
Confidence 899999999999999999888888887777653
No 52
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=7e-26 Score=213.14 Aligned_cols=327 Identities=15% Similarity=0.071 Sum_probs=221.7
Q ss_pred HhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHH
Q 014832 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIG 130 (417)
Q Consensus 52 ~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 130 (417)
......|.+|.+.+++|.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.....++.+ +..+++++.+++.
T Consensus 23 ~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 102 (394)
T PRK11652 23 AQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAA 102 (394)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 344556888899999999999999999999999999999999999999999999999999999999 8899999999999
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHH
Q 014832 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
|++.|++.+...+.. ..+..|..++ +......+. ...+..++..++|.+++.+.+.. |||+.|++.++..++
T Consensus 103 ~~~~g~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~g~~i~~~l~~~~--g~~~~f~~~~~~~~~ 174 (394)
T PRK11652 103 SAIQGLGTGVGGVMA-RTLPRDLYEG----TQLRHANSL-LNMGILVSPLLAPLIGGLLTTLF--GWRACYLFLLLLGAG 174 (394)
T ss_pred HHHHHhhhhHHHHHH-HHHHHHhcCH----HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcc--ChHHHHHHHHHHHHH
Confidence 999999988776665 4566665111 111112222 23345666677777777777766 999999998877665
Q ss_pred HHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCCh---hHHH
Q 014832 211 GMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIF 287 (417)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 287 (417)
..+......||++++++++ ++.++++++.+|+|+.+...+....... .......+.+.+.++..+.+. +...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 249 (394)
T PRK11652 175 VTFSMARWMPETRPADARR----TRVLASYRTLLSNRRFNCYLLMLIGTLA-GIAVFEACSGVLMGAVLGLSSMTVSILF 249 (394)
T ss_pred HHHHHHHhCCccCccccch----hHHHHHHHHHHcChHHHHHHHHHHHHHH-HHHHHHHhChHHHHHHcCCCHHHHHHHH
Confidence 5544444566654332221 1235567788888876654443322222 222223345666665333333 5555
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014832 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (417)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (417)
....++.+++..+.+++.||.+++ ........................ +.+.......+.+++.+.
T Consensus 250 ~~~~~~~~~g~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~~~ 315 (394)
T PRK11652 250 ILPIPAAFFGAWFAGRPNKRFSTL----MWQSVICCLLAGLLMWIPGWFGVM----------NVWTLLVPAALFFFGAGM 315 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhccc----------cHHHHHHHHHHHHHHHHH
Confidence 566677888888889999887622 222222222221111111100000 335556667788888888
Q ss_pred cchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 368 FWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
..|...+...|..| ++++++.++.+...+++..++...
T Consensus 316 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~ 353 (394)
T PRK11652 316 LFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALL 353 (394)
T ss_pred HHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999987 468999999888888888887764
No 53
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=1.6e-26 Score=215.50 Aligned_cols=326 Identities=15% Similarity=0.118 Sum_probs=213.5
Q ss_pred hhhhhhhHHH-HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc-hHHHHHH
Q 014832 53 DWLQGPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP-QYKILMI 129 (417)
Q Consensus 53 ~~~~~~~l~~-l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~-~~~~l~~ 129 (417)
.....+++|. +.+++|+|+.+.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.+ +.+++ +++.+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 96 (366)
T TIGR00886 17 WFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLL 96 (366)
T ss_pred HHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3444788884 8899999999999999999999999999999999999999999999999999999 99999 9999999
Q ss_pred HHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc----cCCCchhH-
Q 014832 130 GRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF----SLGPVAPF- 201 (417)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~----~~gw~~~f- 201 (417)
.|+++|++.+.. +.. ..+++|+ ++|+...+... .....|..+++.+++.+.....+.. ..+||+.|
T Consensus 97 ~~~~~g~~~~~~-~~~-~~~~~~~~~~~~r~~~~~~~~----~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~ 170 (366)
T TIGR00886 97 LRLFIGIAGGSF-ASC-MPWISFFFPKKIQGTALGLAA----GWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFV 170 (366)
T ss_pred HHHHHHHhchhh-HhH-HHHHHHhcCHhhhhHHHHHHH----HHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhH
Confidence 999999996654 445 4577877 34444333222 2233445555555555444332210 12899999
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCCchh-HH--------HHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhc
Q 014832 202 DAAACFLAIGMVIILSSWTENYGDPSESKD-LL--------TQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (417)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (417)
...++...+..++.....+|++++++++++ +. ++..+..++.+++|+.+...+...+.....+ ....+.|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 249 (366)
T TIGR00886 171 IVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFL-GVSSIFA 249 (366)
T ss_pred HHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHH-HHHHHHH
Confidence 443444444333333233433221111110 00 0111145667788887776665544433333 4455788
Q ss_pred cccCCCCCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccc
Q 014832 273 ALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISF 349 (417)
Q Consensus 273 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (417)
.|+++..+.+ .+.......+..++++++.+++.||+|+| +...........+..+.......+.
T Consensus 250 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~----------- 316 (366)
T TIGR00886 250 MFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA--RKLLMSFLGVAMGAFLVVLGLVSPL----------- 316 (366)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc--hhHHHHHHHHHHHHHHHHhcCCCcc-----------
Confidence 8887744433 35556677788899999999999999987 6655555544444433333221000
Q ss_pred chhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHH
Q 014832 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIF 399 (417)
Q Consensus 350 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~ 399 (417)
+.+..+....+..+..+...+..+....|..| +++|+++|+.+...++|
T Consensus 317 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 317 SLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred hHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 22344455566667777777788888888887 57999999877766554
No 54
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=4.3e-27 Score=220.13 Aligned_cols=329 Identities=13% Similarity=0.074 Sum_probs=220.4
Q ss_pred hhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHH
Q 014832 55 LQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRIL 133 (417)
Q Consensus 55 ~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l 133 (417)
...+..|.+.+++|.|+.+.|++.+...++..+++++.|+++||+|||+++..+.++.+++.+ +.++++++.+++.|++
T Consensus 13 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (379)
T TIGR00881 13 NFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWAL 92 (379)
T ss_pred hhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 335677788899999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHh-hhhhhhhhhccCCCchhHHHHHHHHH
Q 014832 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSG-LFGNLLVDSFSLGPVAPFDAAACFLA 209 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~-~~~~~~~~~~~~gw~~~f~~~~~~~~ 209 (417)
.|++.+...+.. ..++.|+ ++|++..+.... . ..+|..+++ .++..+.+.. +||+.|++.+++.+
T Consensus 93 ~g~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~~----~----~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 161 (379)
T TIGR00881 93 NGIFQGMGWPPC-GRTVTKWFSRSERGTWVSFWNC----S----HNVGGGLLPPLVLFGIAELY--SWHWVFIVPGIIAI 161 (379)
T ss_pred HHhhccccCCch-HHHHHHhcCHhhheeeEeehhc----c----chhHHHHHHHHHHHHHHhcC--CchhHHHHHHHHHH
Confidence 999999888887 6688887 344443333222 2 334445555 3444444555 99999998887766
Q ss_pred HHHHHHHhhccccCCCCC-----C---ch---------hHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhc
Q 014832 210 IGMVIILSSWTENYGDPS-----E---SK---------DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (417)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~-----~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (417)
+..++.....+|++++++ + ++ ++.++.+...++++|+|.++.+.+...+...... ....|.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 240 (379)
T TIGR00881 162 IVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRT-GILDWSP 240 (379)
T ss_pred HHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 655555434444321100 0 00 0001112345667788887777666555444333 4455788
Q ss_pred cccCCCCCC---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccc
Q 014832 273 ALSPNDEEI---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISF 349 (417)
Q Consensus 273 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (417)
.|.++..+. +.+.......++.+++.++.+++.||..++.+..+.................. ...
T Consensus 241 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------- 308 (379)
T TIGR00881 241 LYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLN--PAA---------- 308 (379)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcC--cch----------
Confidence 888764333 33666677788899999999999998644412222222111111111111111 000
Q ss_pred chhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 350 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+........++.++......+.......|.+|++.|+++.|+.+...+++..++....
T Consensus 309 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 366 (379)
T TIGR00881 309 NPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPL 366 (379)
T ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhH
Confidence 2233344445555555455566678899999999999999999988888887776543
No 55
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.95 E-value=8.4e-26 Score=211.47 Aligned_cols=319 Identities=13% Similarity=0.121 Sum_probs=208.7
Q ss_pred HHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHH
Q 014832 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKI 126 (417)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~ 126 (417)
+.....+...+++|.+.+|+|.|+.++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+ ++++++++.
T Consensus 17 ~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (381)
T PRK03633 17 LLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWS 96 (381)
T ss_pred HHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 3344445567999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHH
Q 014832 127 LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDA 203 (417)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~ 203 (417)
+++.|+++|++.+...+..+. .+.+. ++|++ ..+... .+..+|..+++.+++.+.+.. .|...+.
T Consensus 97 l~~~~~l~G~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~-~~~~~g~~~g~~~~~~l~~~~--~~~~~~~- 164 (381)
T PRK03633 97 WLAWRFVAGIGCAMIWVVVES-ALMCSGTSRNRGR-------LLAAYM-MVYYLGTVLGQLLVSKVSTEL--MSVLPWV- 164 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhCCHHHHHH-------HHHHHH-HHHHHHHHHHHHHHhcccccc--cchHHHH-
Confidence 999999999999988777633 44444 23332 222222 224555566666666554432 2333332
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCC-
Q 014832 204 AACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEI- 281 (417)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 281 (417)
.+........+.....+++++ ++ ++ .++.++.+|+|+.+...... +.....+.....+.|.|.++ +.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~--~~-~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lp~~~~~~g~s~~ 235 (381)
T PRK03633 165 TGLVLAAILPLLFTRILNQQA--EN-HD-----STSIWPMLKLRQARLGVNGC-IISGIVLGSLYGLMPLYLNHQGMSDA 235 (381)
T ss_pred HHHHHHHHHHHHHhcccCCCC--CC-CC-----CCCHHHHHHhcchHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 222222222222212222211 11 10 12334566777665433222 22222223334468888776 2222
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHH
Q 014832 282 PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTF 361 (417)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 361 (417)
..+...+...++.+++++..+++.||+++| +.+..+.....++..... . . ........+.
T Consensus 236 ~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~--~~l~~~~~~~~~~~~~~~--~---------------~-~~~~~~~~l~ 295 (381)
T PRK03633 236 SIGFWMALLVSAGILGQWPIGRLADRFGRL--LVLRVQVFVVILGSIAML--S---------------Q-AAMAPALFIL 295 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHcCcH--HHHHHHHHHHHHHHHHHh--h---------------h-HHHHHHHHHH
Confidence 235666777788999999999999999887 666666555554443322 1 1 1122344555
Q ss_pred HHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 362 EACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 362 g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+++.....|...+.+.|..|+++++.+.+..+..++++..++....
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~ 341 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFT 341 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655566788999999999998888888887777888877777643
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=2.7e-25 Score=209.05 Aligned_cols=324 Identities=14% Similarity=0.089 Sum_probs=213.3
Q ss_pred HhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHH
Q 014832 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIG 130 (417)
Q Consensus 52 ~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 130 (417)
+.....+.+|.+.+++|.|+.+.++..+.+.++..+++++.|+++||+|||+.+..+.+...++.+ +..+++++.+++.
T Consensus 18 ~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 97 (392)
T PRK10473 18 GIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAG 97 (392)
T ss_pred HHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 334446889999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHH
Q 014832 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
|+++|++.+...+.. ..++.|..++ +.+....+..... ..++..++|.+++.+.+.. +||+.|++.++..++
T Consensus 98 ~~l~g~~~~~~~~~~-~~~i~~~~~~----~~r~~~~~~~~~~-~~i~~~~~~~i~~~l~~~~--g~~~~~~~~~~~~~i 169 (392)
T PRK10473 98 RFLQGIGAGCCYVVA-FAILRDTLDD----RRRAKVLSLLNGI-TCIIPVLAPVLGHLIMLKF--PWQSLFYTMAAMGIL 169 (392)
T ss_pred HHHHHhhhhHHHHHH-HHHHHHHcCH----HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCc--ChHHHHHHHHHHHHH
Confidence 999999999887777 6678887111 1122233333333 4455677777777766666 999999998887776
Q ss_pred HHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCC---hhHHH
Q 014832 211 GMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIF 287 (417)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 287 (417)
..++.....||++++++++++ +..+..++.+|+++.+...+...+...... ....+.|.+.++..+.+ .+...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~ 245 (392)
T PRK10473 170 VLLLSLFILKETRPARAPAAS---SKPRENSESLLNRFFLSRLVITTLSVTVIL-TFVNTSPVLLMEQMGFSRGEYAIIM 245 (392)
T ss_pred HHHHHHHHcCCCCCcccCCcc---chHHHHHHHHhCHHHHHHHHHHHHHHHHHH-HHHHhCHHHHHHHcCCCHHHHHHHH
Confidence 666655456665433222111 112334566777776654444333322222 23335666665533433 35566
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014832 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (417)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (417)
....++.+++.+..+++.||+|+| +.+..+..+..+......... +.+.......+.+.+.+.
T Consensus 246 ~~~~~~~i~~~~~~~~l~~r~g~~--~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~~g~~~ 308 (392)
T PRK10473 246 ALTAGVSMTVSFSTPFALGIFKPR--TLMLTSQVLFLAAGITLALSP---------------SHAVSLFGITLICAGFSV 308 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHH
Confidence 677788899999999999999887 777666666555555544443 223333334444444443
Q ss_pred cchhHHHHHhhcCCcccc-cccccccccchhHHHHHHHHH
Q 014832 368 FWPSIMKMRSQYIPEEAR-STIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r-~~~~g~~~~~~~~~~~~~~~~ 406 (417)
..+. ....+..|.++| +.+.++..+...++..++...
T Consensus 309 ~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l 346 (392)
T PRK10473 309 GFGV--AMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWL 346 (392)
T ss_pred HhHH--HHHHHhccCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 3333 333445555444 444555444444555444443
No 57
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.95 E-value=1.7e-25 Score=216.61 Aligned_cols=359 Identities=11% Similarity=-0.030 Sum_probs=221.1
Q ss_pred CcCcCCcchhHHHHHHHHHHHHhhhh----hhhHHHHHHh-----cCCCcchHHHHHHHHHHHHhhhhccccccccccCc
Q 014832 31 TSSAFNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYST-----YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR 101 (417)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~-----~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Gr 101 (417)
|+.+..++++....++.+..+.++++ +...|.+.++ .+.++.+.+++.+...++..+++++.|+++||+||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Gr 85 (502)
T TIGR00887 6 DTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGR 85 (502)
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 44566777877777777777777776 3445554443 23455677899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHH-HhcCch------HHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHH
Q 014832 102 KRACVTYCLTYILSCI-TKHSPQ------YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAI 171 (417)
Q Consensus 102 r~~~~~~~~~~~~~~~-~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~ 171 (417)
|+++..+.++..++.+ ++++++ ++.+++.|++.|++.|...+.. +.++.|+ ++|++..+.... ..
T Consensus 86 r~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~-~~~~~e~~p~~~Rg~~~~~~~~----~~ 160 (502)
T TIGR00887 86 KRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLS-AIITSEFATKKWRGAMMAAVFA----MQ 160 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHhcChhhHHHHHHHHHH----HH
Confidence 9999999999999988 888765 7899999999999999998888 7899998 445543333322 23
Q ss_pred HHHHHHHHHHHhhhhhhhhh-----------------hccCCCchhHHHHHHHHHHHHHHHHhhccccCC------CCCC
Q 014832 172 FLGNGLVAILSGLFGNLLVD-----------------SFSLGPVAPFDAAACFLAIGMVIILSSWTENYG------DPSE 228 (417)
Q Consensus 172 ~~g~~~g~~l~~~~~~~~~~-----------------~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 228 (417)
.+|..+++.++..+.....+ ...++||++|.+.+++.++..+..+ ..||+++ ++++
T Consensus 161 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~-~lpESpr~l~~~~~~~~ 239 (502)
T TIGR00887 161 GFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRL-TIPETPRYTADVAKDVE 239 (502)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHhCcchH
Confidence 33333333333322211100 1113799999888877766655544 6777632 1111
Q ss_pred -chhHH----------------------HHHHhHHHHHhcc---chhHHHH---HHHHHHHhHHHHHHHhhhccccCC-C
Q 014832 229 -SKDLL----------------------TQFRGAAVAIASD---EKIALLG---AIQSLFEGSMYTFVFLWTPALSPN-D 278 (417)
Q Consensus 229 -~~~~~----------------------~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~ 278 (417)
+++.. +..+.++++++++ ++.+... ....+.....++....|.|.++++ +
T Consensus 240 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G 319 (502)
T TIGR00887 240 QAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIG 319 (502)
T ss_pred HHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHc
Confidence 00000 0011245566542 2211111 111122222333455567777655 3
Q ss_pred CCCCh-h-----------H-HHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 014832 279 EEIPH-G-----------F-IFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (417)
Q Consensus 279 ~~~~~-~-----------~-~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (417)
.+... + . ......++.+++.++.+++.||+||| +.++.+..+..+++.+.........
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR--~~l~~~~~~~~~~~~~l~~~~~~~~------- 390 (502)
T TIGR00887 320 YSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK--PIQLMGFFILTVLFFVLGFAYNHLS------- 390 (502)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch--hHHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence 32211 1 0 12233456677889999999999998 7776666666655544443321000
Q ss_pred CcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhc
Q 014832 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVC 408 (417)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~ 408 (417)
.............+......+..+.+..|.+|++.|+++.|+.+...+++..++.....
T Consensus 391 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~ 449 (502)
T TIGR00887 391 ----THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFL 449 (502)
T ss_pred ----hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhh
Confidence 11111111111122222345677788899999999999999999988888888877544
No 58
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.95 E-value=5.4e-26 Score=218.51 Aligned_cols=323 Identities=12% Similarity=-0.012 Sum_probs=216.1
Q ss_pred hcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hhc--CchHHHHHHHHHHHHHHhhhhh
Q 014832 66 TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKH--SPQYKILMIGRILGGIATSLLF 142 (417)
Q Consensus 66 ~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~--~~~~~~l~~~r~l~G~~~~~~~ 142 (417)
|++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+ +.+ ..+++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 7899999999999999999999999999999999999999999999888877 644 3568889999999999999999
Q ss_pred hhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-ccCCCchhHHHHHHHHHHHHHHHHhhccc
Q 014832 143 SAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS-FSLGPVAPFDAAACFLAIGMVIILSSWTE 221 (417)
Q Consensus 143 ~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~-~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 221 (417)
+.. ..++.|+.+ .+.+....+... .+..+|..+++.+.+.+.+. . +||++|++.++..++..++.+...+|
T Consensus 150 ~~~-~~~~~~~~~----~~~r~~~~~~~~-~~~~~g~~i~~~l~~~l~~~~~--gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 150 PAT-HKIIVKWAP----PKERSRLLGMST-SGFQLGTFIFLPISGWLCESWG--GWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred hhH-HHHHHhcCC----HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccC--CCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 888 678888822 122222333322 33666667777777777665 5 99999999988877666655534444
Q ss_pred cCCCCCC-chhHHH-------------HHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCC---Chh
Q 014832 222 NYGDPSE-SKDLLT-------------QFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI---PHG 284 (417)
Q Consensus 222 ~~~~~~~-~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 284 (417)
+++++++ .+++++ +.+.+++++++++.++...+.........+ ....|.|.|+++..+. +.+
T Consensus 222 ~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lp~~l~~~~g~s~~~~g 300 (465)
T TIGR00894 222 DPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYT-ILPTYLPTFISWVLRVSGKENG 300 (465)
T ss_pred CcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcChHHhH
Confidence 3322211 111110 011247788888888877776655444444 5556899999874433 336
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCccch-H-H--HHHHHHHHH-HHHHHHHhhccCCCCCCCCCcccchhHHHHHHH
Q 014832 285 FIFATFMLASMLGSSLASRLMARSPPRVESY-M-Q--IVFVVSSVS-LLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFC 359 (417)
Q Consensus 285 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~-l-~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (417)
...+...++..++.++.|+++||.++|.... . . ....+.... ............ +....+..+.
T Consensus 301 ~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 369 (465)
T TIGR00894 301 LLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSA-----------AFYLTIIILT 369 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----------chHHHHHHHH
Confidence 6667778899999999999999876441111 1 0 111111111 111111111000 2233444455
Q ss_pred HHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhcC
Q 014832 360 TFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCS 409 (417)
Q Consensus 360 l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~~ 409 (417)
+.+.+.+...+.......|..|+ .+|.+.|+.+...+++..++......
T Consensus 370 l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~ 418 (465)
T TIGR00894 370 LANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGN 418 (465)
T ss_pred HHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhhe
Confidence 55555555555555666677766 79999999999999998888877654
No 59
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.95 E-value=8.2e-26 Score=209.64 Aligned_cols=317 Identities=15% Similarity=0.095 Sum_probs=210.3
Q ss_pred hhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHH
Q 014832 56 QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILG 134 (417)
Q Consensus 56 ~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~ 134 (417)
..|.+|.+.+|+|+|+++.|++.+.+.++..+++++.|+++||+||||++..+.+...++.+ + ..++++.+++.|++.
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 97 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALI 97 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHH
Confidence 37899999999999999999999999999999999999999999999999999988888888 7 778999999999999
Q ss_pred HHHhhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHH
Q 014832 135 GIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~ 212 (417)
|++.+...+.. +.++.|+ ++|++..+ ..+.. ..+|..+++.+...+.+....+||..|...++..++..
T Consensus 98 g~g~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~----~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~ 168 (355)
T TIGR00896 98 GVGIAIINVLL-PSLIKRDFPQRVGLMTG----LYSMA----LMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL 168 (355)
T ss_pred HHHHHHHhccc-hHHHHHhCcchhhHHHH----HHHHH----HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 99999877666 5566666 33332222 22222 34444555555555444331249999887766544433
Q ss_pred HHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCC-ChhHHHHHH
Q 014832 213 VIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEI-PHGFIFATF 290 (417)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~ 290 (417)
.. ..|+.+++++++++. .+...++.+|+|..+...+...+... .+.....|.|.|+++ +.+. +.+...+..
T Consensus 169 ~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~ 241 (355)
T TIGR00896 169 LA---WIPQVRRRVAANQTT---TRLTPVRIWRSPLAWQVTVFFGLQSG-LYYSLIGWLPAILISHGASAATAGSLLALM 241 (355)
T ss_pred HH---HhhhhccccCCCCCC---CCCCCchhhcCHhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 22 233322221111110 01234566777777766554443333 333455588988876 2222 346677788
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccch
Q 014832 291 MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWP 370 (417)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 370 (417)
.++.+++++..|++.||+++| ++.+..+..+..++........ +.... ....+.|++.+..+|
T Consensus 242 ~~~~i~~~~~~g~l~dr~~~~-~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~-~~~~l~g~~~g~~~~ 304 (355)
T TIGR00896 242 QLAQAASALLIPALARRVKDQ-RGIVAVLAVLQLVGLCGLLFAP---------------MHGLW-AWALVLGLGQGGAFP 304 (355)
T ss_pred HHHHHHHHHhHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHHhh---------------hhHHH-HHHHHHHHhhhhHhH
Confidence 889999999999999999544 1444455555555444443332 11111 245677888888888
Q ss_pred hHHHHHhhcCC-cccccccccccccchhHHHHHHHHH
Q 014832 371 SIMKMRSQYIP-EEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 371 ~~~~~~~~~~p-~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
...+...+..+ ++++++..++.+...+++..++...
T Consensus 305 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~ 341 (355)
T TIGR00896 305 LALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLF 341 (355)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777765554 5667888888776666666666543
No 60
>TIGR00898 2A0119 cation transport protein.
Probab=99.95 E-value=2.5e-26 Score=223.27 Aligned_cols=319 Identities=13% Similarity=0.034 Sum_probs=224.2
Q ss_pred hhHHHHHHhcCCC---cchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHH
Q 014832 58 PYVYYLYSTYGFG---KGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRIL 133 (417)
Q Consensus 58 ~~l~~l~~~~g~s---~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l 133 (417)
+..|.+.+|+|++ +.+.++..+++.++..+++++.|+++||+|||+++.++.++.+++.+ .+++++++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 5667788999999 89999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHH
Q 014832 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
.|++.+...+.. ..++.|+ ++|+. ..+.. ..+..+|.++++.++..+. +||+.|++.+++.++
T Consensus 190 ~G~~~~~~~~~~-~~~~~e~~~~~~r~~-------~~~~~-~~~~~~g~~~~~~~~~~~~-----~wr~~~~~~~i~~~~ 255 (505)
T TIGR00898 190 VGMGIGGIWVQA-VVLNTEFLPKKQRAI-------VGTLI-QVFFSLGLVLLPLVAYFIP-----DWRWLQLAVSLPTFL 255 (505)
T ss_pred HHhhccchHHHH-HHHhheecChhhhHH-------HHHHH-HHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHH
Confidence 999999988888 6788888 22332 22222 3335566666676665543 699999999888776
Q ss_pred HHHHHHhhccccCC------CCCCchhH---------------------HH-----HHHhHHHHHhccchhHHHHHHHHH
Q 014832 211 GMVIILSSWTENYG------DPSESKDL---------------------LT-----QFRGAAVAIASDEKIALLGAIQSL 258 (417)
Q Consensus 211 ~~~~~~~~~~~~~~------~~~~~~~~---------------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 258 (417)
..+..+ ..||+++ +.+++++. .+ +.+.+.++++|+++.+...+...+
T Consensus 256 ~~~~~~-~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 334 (505)
T TIGR00898 256 FFLLSW-FVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMM 334 (505)
T ss_pred HHHHHH-hcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHH
Confidence 666554 6666532 11100000 00 001245677777776655544433
Q ss_pred HHhHHHHHHHhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccC
Q 014832 259 FEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVA 338 (417)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 338 (417)
...... ......+.+.. ..+.+........++..+++.++.+++.||+||| +.+.....+.+++++.....+. .
T Consensus 335 ~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr--~~~~~~~~~~~~~~l~~~~~~~--~ 408 (505)
T TIGR00898 335 LWFTTA-FSYYGLVLDLG-NLGGNIYLDLFISGLVELPAKLITLLLIDRLGRR--YTMAASLLLAGVALLLLLFVPV--D 408 (505)
T ss_pred HHHHHH-HHHHHHhcccc-ccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHcCC--C
Confidence 222211 11111222222 2233344444566778889999999999999988 7777777666666655544431 0
Q ss_pred CCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhc
Q 014832 339 PSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVC 408 (417)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~ 408 (417)
..+......++.+++.+..++..+.+..|.+|++.|++++|+.+....++..++.+...
T Consensus 409 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 409 -----------LYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 12344445556666777777888999999999999999999999989999888877654
No 61
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=2.7e-25 Score=206.32 Aligned_cols=324 Identities=14% Similarity=0.024 Sum_probs=211.4
Q ss_pred hhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccccc-----CchHH-HHHHHHHHHHHHH-HhcC---chH
Q 014832 55 LQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKRA-CVTYCLTYILSCI-TKHS---PQY 124 (417)
Q Consensus 55 ~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-----Grr~~-~~~~~~~~~~~~~-~~~~---~~~ 124 (417)
+..+.+|.+.+|+|+|.+++|+.... .+...+ .+++|+++||+ ||||. ++.+.+..++... .++. .+.
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l 83 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDL 83 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhH
Confidence 34577888899999999999998655 455454 88999999998 89997 4567777777766 6666 456
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc------cC
Q 014832 125 KILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF------SL 195 (417)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~------~~ 195 (417)
+.+....++.+++.+...++. .+++.|+ ++|++..+... .|..+|.++++.++..+.+.. .+
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~-~a~~~~~~~~~~r~~~~~~~~--------~~~~~G~~~~~~l~~~l~~~~g~~~~~~~ 154 (356)
T TIGR00901 84 PLLAGLAFLIAFFSATQDIAL-DAWRLEILSDEELGYGSTIYI--------VGYRAGMLLSGSLALVLASPEFANTGLIT 154 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHhhhchHHHHHH--------HHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 677777788888888877777 5688887 44444333222 234445555555555555554 01
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccch---hHHHHHHHHHHHhHHHHHHHhhhc
Q 014832 196 GPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEK---IALLGAIQSLFEGSMYTFVFLWTP 272 (417)
Q Consensus 196 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 272 (417)
+||.+|++.++..++..+..+...||+++++++++++.++.++++++++++|. .+.+.+...+... .+.....+.|
T Consensus 155 ~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 233 (356)
T TIGR00901 155 LWGYIFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKL-GDSAATVLTT 233 (356)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 39999999988777766554434455433222222222334456777887765 5555444444333 3334555788
Q ss_pred cccCCCCCCCh---hHHHHHHH-HHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcc
Q 014832 273 ALSPNDEEIPH---GFIFATFM-LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (417)
Q Consensus 273 ~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (417)
.|.++ .+.+. +......+ ++.+++.++.+++.||+|+| +.+..+..+..+......+.....+. .+...
T Consensus 234 ~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~--~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 306 (356)
T TIGR00901 234 LFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL--YALLLFGIVQALTNAGFVWLASNGHH----DGITF 306 (356)
T ss_pred HHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH--HHHHHHHHHHHHHHHHHHHHHhcCcc----ccccc
Confidence 88876 44444 33444434 46788999999999999987 67776666665554444333211000 00000
Q ss_pred cchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchh
Q 014832 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN 397 (417)
Q Consensus 349 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 397 (417)
.+.+......++.+++.+...+...++..|.+|+++||+.+|+.+...|
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 307 PHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 0335556667778899999999999999999999999999998766544
No 62
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.95 E-value=3.1e-25 Score=206.75 Aligned_cols=333 Identities=13% Similarity=0.023 Sum_probs=219.6
Q ss_pred HHHHHhhh-hhhhHHHHHH-hcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC---
Q 014832 48 LMMAGDWL-QGPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS--- 121 (417)
Q Consensus 48 ~~~~~~~~-~~~~l~~l~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~--- 121 (417)
...+..++ .+|..+.+.+ |+|+|++|.+++.++..+++.+.+++.|++.||+|.|+++.++.++.++.++ .+++
T Consensus 44 ~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~ 123 (462)
T PRK15034 44 LLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQN 123 (462)
T ss_pred HHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcc
Confidence 44444443 3677777765 8999999999999999999999999999999999999999999999999999 8876
Q ss_pred --chHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhc--
Q 014832 122 --PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL-LVDSF-- 193 (417)
Q Consensus 122 --~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~-~~~~~-- 193 (417)
++++.+++.|++.|++ +..++.. ...++++ ++||+..+... .....|..++..+.|.+... +.+.+
T Consensus 124 ~~~s~~~lli~r~l~Gig-g~~f~~~-~~~vs~wfp~~~rG~A~Gi~~----g~G~~G~~l~~~l~p~~i~~~l~~~~G~ 197 (462)
T PRK15034 124 PNTPFGIFIVIALLCGFA-GANFASS-MGNISFFFPKAKQGSALGING----GLGNLGVSVMQLVAPLVIFVPVFAFLGV 197 (462)
T ss_pred cCCCHHHHHHHHHHHHHH-HHhHHHH-HHHHHHHCCHhHhHHHHHHHH----HHHhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999998 5566776 5578887 34555443332 22233444555555543321 11211
Q ss_pred ---------cCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHH
Q 014832 194 ---------SLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMY 264 (417)
Q Consensus 194 ---------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (417)
..+||.+.++..++.++..++.++..++.+++ ++. .++.++.+|+|+.|.+++.+.+......
T Consensus 198 ~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~-~~~-------~~~~~~vlk~~~~Wllslly~~tFG~fv 269 (462)
T PRK15034 198 NGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS-RAS-------IADQLPVLQRLHLWLLSLLYLATFGSFI 269 (462)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-ccC-------HHHHHHHhCCCchhHHHHHHHHHHHHHH
Confidence 01477777777776666665555443332221 111 2345568899999999888866444433
Q ss_pred HHHHhhhccccCCCCCCCh-hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 014832 265 TFVFLWTPALSPNDEEIPH-GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (417)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (417)
....|.|.|.++.++... ........+...+.++++|+++||+|++ +.+..+.....++..........+
T Consensus 270 -g~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~--~vl~~~~i~~~i~~~~~~l~lp~~------ 340 (462)
T PRK15034 270 -GFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGV--RVTLINFIFMAIFSALLFLTLPGT------ 340 (462)
T ss_pred -HHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch--HHHHHHHHHHHHHHHHHHHHhccc------
Confidence 456589999887553222 1122344567888999999999999988 777777766655543322222100
Q ss_pred CCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCc---------------------ccccccccccccchhHHHHH
Q 014832 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPE---------------------EARSTIMNFFRIPLNIFVCV 402 (417)
Q Consensus 344 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~---------------------~~r~~~~g~~~~~~~~~~~~ 402 (417)
...+.+...+.++...+..|..+...+-++.+.+|+ ++-|.+.|+......+|+++
T Consensus 341 ---~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~ 417 (462)
T PRK15034 341 ---GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFF 417 (462)
T ss_pred ---cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccch
Confidence 001445556666666677777777888888888874 13455666666655665555
Q ss_pred HHHH
Q 014832 403 VLYN 406 (417)
Q Consensus 403 ~~~~ 406 (417)
....
T Consensus 418 ~p~~ 421 (462)
T PRK15034 418 IPQA 421 (462)
T ss_pred hhHH
Confidence 5433
No 63
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.95 E-value=2.5e-25 Score=209.34 Aligned_cols=324 Identities=17% Similarity=0.193 Sum_probs=201.2
Q ss_pred hhHHHHHHhcC--CCcchHHHHHHH-----HHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHH----
Q 014832 58 PYVYYLYSTYG--FGKGEIGQLFIA-----GFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYK---- 125 (417)
Q Consensus 58 ~~l~~l~~~~g--~s~~~~g~~~s~-----~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~---- 125 (417)
+..+.+.+++. .++++.+.+.+. .+++..+++++.|+++||+||||++..+.++..++.+ ++++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGI 93 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHH
Confidence 34444455543 455666654443 3455567899999999999999999999999999999 99998875
Q ss_pred ----HHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhh----hhhhhcc
Q 014832 126 ----ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN----LLVDSFS 194 (417)
Q Consensus 126 ----~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~----~~~~~~~ 194 (417)
.+++.|+++|++.+...+.. ..++.|+ ++|++...... .+..+|..+++.++..+.. ...+..
T Consensus 94 ~~~~~~~~~r~l~G~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~~~----~~~~~G~~i~~~~~~~~~~~~~~~~~~~~- 167 (394)
T TIGR00883 94 WAPILLLLARLIQGFSLGGEWGGA-ALYLAEYAPPGKRGFYGSFQQ----VGAPVGLLLAALTVLLLSYLLGDDALLEW- 167 (394)
T ss_pred HHHHHHHHHHHHHHhhcccccccc-HHHhhhcCCcccchHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCHHHhhcc-
Confidence 48899999999999888887 6788887 44444333322 2333333333333332221 112334
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccch--hHHHHHHHHHHHhHHHHHHHhhhc
Q 014832 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEK--IALLGAIQSLFEGSMYTFVFLWTP 272 (417)
Q Consensus 195 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 272 (417)
+||++|.+.++..++...+.. ..||+++.+++++ +.++.+++.++.+++++ ++...... +.....+.....+.|
T Consensus 168 -~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 243 (394)
T TIGR00883 168 -GWRIPFLVSAVLVLIGLYLRR-NLEETPVFEKAQE-KHKKKRGPIRETLTKHRKPFLLGLGLV-IATTTTFYLITTYLP 243 (394)
T ss_pred -chHHHHHHHHHHHHHHHHHHH-hcCCChhHHHHHh-ccccccCCHHHHHHhchHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 899999988776665544433 4455432211111 11112234556666654 44433333 333334444556788
Q ss_pred cccCCCCCC---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHH-HHHHHHhhccCCCCCCCCCcc
Q 014832 273 ALSPNDEEI---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSL-LLPIVTSFLVAPSNVKSGGIS 348 (417)
Q Consensus 273 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 348 (417)
.|.++..+. +.+.......++..++.++.+++.||+|+| +.+.....+..+.. ........ ..
T Consensus 244 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~~~-~~---------- 310 (394)
T TIGR00883 244 TYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR--PVLIIFTVLAALLAVPLLMALLD-SG---------- 310 (394)
T ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH--HHHHHHHHHHHHHHHHHHHHHhc-CC----------
Confidence 888653333 235556677788899999999999999987 65554443333322 11111110 00
Q ss_pred cchhHHHHHHHHHHHhhhccchhHHHHHhhcCCccccccccccc-ccchhHHHHHHHH
Q 014832 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFF-RIPLNIFVCVVLY 405 (417)
Q Consensus 349 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~-~~~~~~~~~~~~~ 405 (417)
+.+.......+.+++.+...+..++...|.+|+++|+++.++. ++...++..++..
T Consensus 311 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~ 367 (394)
T TIGR00883 311 -SFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPY 367 (394)
T ss_pred -chHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHH
Confidence 3345556667778888888889999999999999999999984 3434455544443
No 64
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.95 E-value=5.6e-25 Score=206.79 Aligned_cols=313 Identities=10% Similarity=0.067 Sum_probs=211.6
Q ss_pred HHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hhc---Cch
Q 014832 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKH---SPQ 123 (417)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~---~~~ 123 (417)
+..+..++..|.+|.+++++|.|+.+.|++.+..++++.+++++.|++.||+|||+++..+.++.+++.+ +.. .++
T Consensus 14 ~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~ 93 (410)
T TIGR00885 14 LWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMN 93 (410)
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3444556668999999999999999999999999999999999999999999999999999999998887 544 368
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----------
Q 014832 124 YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLL----------- 189 (417)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~----------- 189 (417)
++.+++.|++.|+|.+...+.. ..++.+. ++|+++.+. ......+|..+|+.+++.+....
T Consensus 94 ~~~~l~~~~l~G~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~ 168 (410)
T TIGR00885 94 YTLFLVGLFILTAGLGFLETAA-NPYILVMGPESTATRRLNL----AQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDK 168 (410)
T ss_pred HHHHHHHHHHHHhhHHHHHhhh-hHHHHHHCCHhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhh
Confidence 9999999999999999998887 4566666 233332222 22333344444444444332111
Q ss_pred -----------hhhccCCCchhHHHHHHHHHHHHHHHH-hhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHH
Q 014832 190 -----------VDSFSLGPVAPFDAAACFLAIGMVIIL-SSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQS 257 (417)
Q Consensus 190 -----------~~~~~~gw~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (417)
.+.. +||++|++.+++.++..++.. ...||.++++ + ++ ++.+++.++++|+|+++...+..+
T Consensus 169 ~~~~~~~~~~~~~~~--~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~-~-~~--~~~~~~~~~~~~~~~~~~~~l~~f 242 (410)
T TIGR00885 169 LSPEELSAIKHSDLA--SVQTPYMIIGAVVLAVALLIMLTKMPALNHSD-A-KQ--ISFSASLSRLARIRHYREGVIAQF 242 (410)
T ss_pred cCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-c-cc--ccchhhHHHHHhChhHHHHHHHHH
Confidence 0122 699999988877666554443 2234322111 1 11 112234557788888777655554
Q ss_pred HHHhHHHHHHHhhhccccCC-CCCCCh---hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHH
Q 014832 258 LFEGSMYTFVFLWTPALSPN-DEEIPH---GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVT 333 (417)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~ 333 (417)
+...... ...+|.+.|.++ +.+.+. +...+....+..+|+++++++.||+++| +.+.+...+..+++++....
T Consensus 243 ~yvg~e~-~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~--~~l~i~~~~~~~~~ll~~~~ 319 (410)
T TIGR00885 243 FYVGVQI-MCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH--KVLMAYAIIGMALCLGSIFA 319 (410)
T ss_pred HHHHHHH-HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHHHHHHc
Confidence 5433333 344578888765 223332 2334455577889999999999999777 77666666666555554443
Q ss_pred hhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCccccccccc
Q 014832 334 SFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMN 390 (417)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g 390 (417)
+ + ......+.+.+++.+..+|..++...+..+++.+..+.+
T Consensus 320 ~---------------~-~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~ 360 (410)
T TIGR00885 320 G---------------G-HVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAG 360 (410)
T ss_pred C---------------C-hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHH
Confidence 3 2 234566777888888889999999999999876543333
No 65
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.95 E-value=2.6e-25 Score=214.64 Aligned_cols=333 Identities=15% Similarity=0.121 Sum_probs=206.8
Q ss_pred hhhHHHHHHhcCCC--------cchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC---chH
Q 014832 57 GPYVYYLYSTYGFG--------KGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS---PQY 124 (417)
Q Consensus 57 ~~~l~~l~~~~g~s--------~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~---~~~ 124 (417)
.+..|.+.++++.+ ..+.+++.+++.++..+++++.|+++||+|||+++..+.++..++.+ +... .++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (481)
T TIGR00879 48 GGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSV 127 (481)
T ss_pred hhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 45666666666666 89999999999999999999999999999999999999999999888 7443 456
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhh---hhhhhhccCCCc
Q 014832 125 KILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG---NLLVDSFSLGPV 198 (417)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~---~~~~~~~~~gw~ 198 (417)
+.+++.|++.|++.+...+.. ..++.|+ ++|++.. +... .+..+|..+++.++ ....+.. +||
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~-~~~i~~~~~~~~r~~~~-------~~~~-~~~~~G~~~~~~~~~~~~~~~~~~--~w~ 196 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALV-PMYLSEIAPKALRGALT-------SLYQ-LAITFGILVAYGFGSGKVSLNNTL--GWR 196 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHH-HHHHHccCChhhhhhhh-------hHHH-HHHHHHHHHHHHHHHHhhcCCCCc--cHH
Confidence 689999999999999988877 6788888 3344322 2222 22455556666655 4444445 999
Q ss_pred hhHHHHHHHHHHHHHHHHhhccccCCC---CCCchhHH---HH-----------H-----------------HhHHHHHh
Q 014832 199 APFDAAACFLAIGMVIILSSWTENYGD---PSESKDLL---TQ-----------F-----------------RGAAVAIA 244 (417)
Q Consensus 199 ~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~-----------~-----------------~~~~~~~~ 244 (417)
+.|++.++..++..+..+ ..||++.. +++.++.. ++ . +..+++.+
T Consensus 197 ~~f~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (481)
T TIGR00879 197 IPLGLQLIPAGLLFLGLF-FLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLF 275 (481)
T ss_pred HHHHHHHHHHHHHHHHHh-cCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHH
Confidence 999997666555544443 55554310 00000000 00 0 00011222
Q ss_pred cc-----chhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCCC-hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHH
Q 014832 245 SD-----EKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEIP-HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQ 317 (417)
Q Consensus 245 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~ 317 (417)
+. ++.+.......+...........|.|.+.++ +.+.+ .+.......++.+++.++.+++.||+++| +.+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~ 353 (481)
T TIGR00879 276 SSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR--PLLL 353 (481)
T ss_pred hcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHH
Confidence 21 2222222222222233233344456666654 33332 24555677788899999999999999988 7777
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhc-cchhHHHHHhhcCCcccccccccccccch
Q 014832 318 IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRIPL 396 (417)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 396 (417)
.+..+..++............. ..+.. .....+....+...+.+. ..+....+..|.+|++.|++++++.+...
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 428 (481)
T TIGR00879 354 IGAAGMAICLFVLGILGASFVT----GSSKS-SGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAAN 428 (481)
T ss_pred HHHHHHHHHHHHHHHHhhcccC----Ccccc-hhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHH
Confidence 6666665555554422111000 00000 012223333333333333 34667778899999999999999999999
Q ss_pred hHHHHHHHHHhc
Q 014832 397 NIFVCVVLYNVC 408 (417)
Q Consensus 397 ~~~~~~~~~~~~ 408 (417)
+++..++.....
T Consensus 429 ~lg~~i~~~~~~ 440 (481)
T TIGR00879 429 WLANFIVGFLFP 440 (481)
T ss_pred HHHHHHHHHHHH
Confidence 998887776543
No 66
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=3.8e-25 Score=207.05 Aligned_cols=323 Identities=13% Similarity=0.079 Sum_probs=219.7
Q ss_pred HHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCch----HHHHHHHHHHHHHHH-HhcCc
Q 014832 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK----RACVTYCLTYILSCI-TKHSP 122 (417)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr----~~~~~~~~~~~~~~~-~~~~~ 122 (417)
....+.++..|++|.+.+|+|.|.+++|++.+++.++..+++++.|+++||+||| +.+.+.... .... ....+
T Consensus 15 ~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~~~~~~~~~~ 92 (382)
T PRK11128 15 GYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--FAVAFWFGAH 92 (382)
T ss_pred HHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--HHHHHHHhcc
Confidence 3345567778999988899999999999999999999999999999999999984 333322222 2223 55568
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhH
Q 014832 123 QYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPF 201 (417)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f 201 (417)
++|.+++.|++.|++.+...+.. .++..++ ++|++..+... .. ..+|..++|.+++.+.+++ |||..|
T Consensus 93 ~~~~l~i~~~l~g~~~~~~~~~~-~a~~~~~~~~~~~a~~~~~-------~~-~~lg~~igp~lgg~l~~~~--g~~~~f 161 (382)
T PRK11128 93 SFWLLFVAIGLFNLFFSPLVPLT-DALANTWQKQIGLDYGKVR-------LW-GSIAFVIGSALTGKLVSWF--GEQAIL 161 (382)
T ss_pred cHHHHHHHHHHHHHHHcccccHH-HHHHHHHHhhccCCcchHH-------HH-HHHHHHHHHHHHHHHHHHc--ChhHHH
Confidence 89999999999999988888877 5566666 44444333322 22 3456677788888888877 999999
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCC
Q 014832 202 DAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEE 280 (417)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 280 (417)
++.++..++..+... ..||+++++++++ ..++..+++++++|+|+++...+...+.+.... ....+.|.|.++ +.+
T Consensus 162 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~g~s 238 (382)
T PRK11128 162 WILTAGVASMLLGQL-LRPTIMPQGESRQ-QESAGWPAWKALLKEPTVWRFLLCVSLLQGSHA-AYYGFSAIYWQAAGYS 238 (382)
T ss_pred HHHHHHHHHHHHHHH-ccCCCCCcccccc-ccccccchHHHHHcChhHHHHHHHHHHHHHHhH-hHHHHHHHHHHHCCCC
Confidence 887765544443333 3454332221111 111123467889999988877665555443332 333456777765 222
Q ss_pred C-ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHH
Q 014832 281 I-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFC 359 (417)
Q Consensus 281 ~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (417)
. +.|...+...++.++..++.+++.||+++| +.+..+.....+........+ +.+..++..+
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~--~~l~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 301 (382)
T PRK11128 239 ASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR--DLLLLSAICGVVRWGLMGSTT---------------ALPWLIVIQI 301 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHhhh---------------hHHHHHHHHH
Confidence 2 246666666778888999999999999877 776666666665554444333 5566777888
Q ss_pred HHHHhhhccchhHHHHHhhcCCcccccccccccc-cchhHHHHHHH
Q 014832 360 TFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR-IPLNIFVCVVL 404 (417)
Q Consensus 360 l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~~~~~~~~~~ 404 (417)
+.+++.+...+....+..+. +++++++..++.+ ...+.+..+|.
T Consensus 302 l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~ 346 (382)
T PRK11128 302 LHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMT 346 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 89999998888888888887 5566788888765 33334433333
No 67
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.94 E-value=7.9e-25 Score=208.55 Aligned_cols=322 Identities=11% Similarity=0.026 Sum_probs=199.0
Q ss_pred hhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC----chHHHHHHHHH
Q 014832 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS----PQYKILMIGRI 132 (417)
Q Consensus 58 ~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~----~~~~~l~~~r~ 132 (417)
...|.+. ++|.|+++.+++.+++.++..+++++.|+++||+|||+.+..+.++.+++.+ .... ++++.+.+.|+
T Consensus 48 ~~~p~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 126 (438)
T TIGR00712 48 LAMPYLV-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLF 126 (438)
T ss_pred hhhHHHH-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHH
Confidence 3444554 4699999999999999999999999999999999999999999999888888 7664 46778889999
Q ss_pred HHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-hhccCCCchhHHHHHHHH
Q 014832 133 LGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV-DSFSLGPVAPFDAAACFL 208 (417)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~-~~~~~gw~~~f~~~~~~~ 208 (417)
+.|++.+..++.. ...+.|+ ++|+... +..... ..++..+++.+.+... +.. +||..|++.++..
T Consensus 127 l~g~~~g~~~~~~-~~~i~~~~~~~~rg~~~-------~~~~~~-~~~g~~~~~~l~~~~~~~~~--~w~~~f~~~~~~~ 195 (438)
T TIGR00712 127 LNGWFQGMGWPPC-GRTMVHWWSQSERGTIV-------SIWNCA-HNIGGGIPPLLVLLGMAWFN--DWHAALYFPAICA 195 (438)
T ss_pred HHHHHhhcchHHH-HHHHHHhcCcccchhHH-------HHHHHH-HHhHhHHHHHHHHHHHHHhh--hhHHHHHHHHHHH
Confidence 9999999887776 5567777 3344322 222222 3444455554444332 234 8999999988887
Q ss_pred HHHHHHHHhhccccCCCC-----CC--c-------hhHHH--HHHhH-HHHHhccchhHHHHHHHHHHHhHHHHHHHhhh
Q 014832 209 AIGMVIILSSWTENYGDP-----SE--S-------KDLLT--QFRGA-AVAIASDEKIALLGAIQSLFEGSMYTFVFLWT 271 (417)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~-----~~--~-------~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (417)
++..+..+...||+++++ ++ . ++.++ +.++. .+.++|++.++...+...+.....+ ....|.
T Consensus 196 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 274 (438)
T TIGR00712 196 IIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRY-GVLDWS 274 (438)
T ss_pred HHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHH-HHHHhH
Confidence 766555544455432210 00 0 00000 01111 1246778877777665544443333 455689
Q ss_pred ccccCCCCCC---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHH-HHHHHhhccCCCCCCCCCc
Q 014832 272 PALSPNDEEI---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLL-LPIVTSFLVAPSNVKSGGI 347 (417)
Q Consensus 272 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 347 (417)
|.|+++..+. +.+.......+++++++++.+++.||++++.+. . .+......... ...+......
T Consensus 275 p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~--------- 343 (438)
T TIGR00712 275 PTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG-A-TGVFFMTLVTIAVIVYWMNPAG--------- 343 (438)
T ss_pred HHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-H-HHHHHHHHHHHHHHHHHhcCCC---------
Confidence 9999874333 345666777788999999999999999655222 2 22222111111 1111110000
Q ss_pred ccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHH-HHHHH
Q 014832 348 SFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFV-CVVLY 405 (417)
Q Consensus 348 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~-~~~~~ 405 (417)
+.+......+..+++.............|.+|++.|++++|+.+...+++. .++..
T Consensus 344 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~ 400 (438)
T TIGR00712 344 --NPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASA 400 (438)
T ss_pred --chHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcch
Confidence 222222333333433222222234567899999999999999987766653 34544
No 68
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.94 E-value=5.6e-27 Score=209.90 Aligned_cols=338 Identities=14% Similarity=0.115 Sum_probs=216.7
Q ss_pred hhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHH
Q 014832 39 KNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYIL 114 (417)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~ 114 (417)
.+..+.+.++.+..+.++ ....+.+.+.+|++++..|++.++..+.+.+++|+.|+++|||+||+++.+|..++.+
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 344444555556655554 3455577889999999999999999999999999999999999999999999999999
Q ss_pred HHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 014832 115 SCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV 190 (417)
Q Consensus 115 ~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~ 190 (417)
+.+ ++++..+|+++++|.+.|+|.+...|.+ +.+++|. .+|++ .+++.+.. ..+|..+|.+.+..+.
T Consensus 111 Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia-~s~IaD~f~~~~Rs~-------~~~ify~~-ipvGsglG~vvgs~va 181 (493)
T KOG1330|consen 111 AVFASGFSNHFWQVLLCRGFVGIGEASYSPIA-PSLIADSFPDDKRSR-------VLGIFYFA-IPVGSGLGYVVGSVVA 181 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhhcccc-hhHhhhcCcchhhhH-------HHHHhhhh-cccccceeEEeeeeec
Confidence 999 9999999999999999999999999999 7899998 33433 33333332 3344444444444444
Q ss_pred hhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCc-hh------HHHHHHhHHHHHhccchhHHHHHHHHHHHhHH
Q 014832 191 DSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES-KD------LLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (417)
Q Consensus 191 ~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (417)
+.. ..||+.|+..+++.++..++.+...+|+++...++ +. ......++.+.+.|++.+....+.....++..
T Consensus 182 ~~~-~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~ 260 (493)
T KOG1330|consen 182 SLT-FWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVI 260 (493)
T ss_pred cCc-cceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhc
Confidence 433 14999999999999998888876666655322111 11 11223345666666666555555554444443
Q ss_pred HHHHHhhhccccCC-----CCCCChhHHH-HHHHHHHHHHHHHHHHHHhhcCCCccc--hHHHHH---HHHHH-HHHHHH
Q 014832 264 YTFVFLWTPALSPN-----DEEIPHGFIF-ATFMLASMLGSSLASRLMARSPPRVES--YMQIVF---VVSSV-SLLLPI 331 (417)
Q Consensus 264 ~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~g~l~dr~g~~~~~--~l~~~~---~~~~~-~~~~~~ 331 (417)
. ....|.|.+... +.+.+.+.++ .+...++.+|.+.+|.++||+.++.++ .....- .+.+. +...+.
T Consensus 261 G-s~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~ 339 (493)
T KOG1330|consen 261 G-SLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLF 339 (493)
T ss_pred c-ccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHH
Confidence 3 233366766554 3334445544 566778889999999999985332111 111111 11111 111111
Q ss_pred HHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhc-cchhHHHHHhhcCCcccccccccccccchhH
Q 014832 332 VTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRIPLNI 398 (417)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~ 398 (417)
....... ......+.+++.|..... .+....-...|.+|+++|.+++++.++...+
T Consensus 340 ~~~~~~~-----------~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~ 396 (493)
T KOG1330|consen 340 LFPAFTS-----------SSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHI 396 (493)
T ss_pred HHHhhhh-----------HHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHH
Confidence 1111000 112222333333443332 3355566788999999999999987765444
No 69
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.94 E-value=1.2e-24 Score=201.19 Aligned_cols=305 Identities=24% Similarity=0.282 Sum_probs=235.9
Q ss_pred HHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHH
Q 014832 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKI 126 (417)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~ 126 (417)
..........+..|.+.+++|.++.+.+++.+...++..+++++.|+++||+||||.+..+.....++.+ ....++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (352)
T cd06174 10 LSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWL 89 (352)
T ss_pred HHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHH
Confidence 3333445557888888899999999999999999999999999999999999999999999999999999 888999999
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHH
Q 014832 127 LMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDA 203 (417)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~ 203 (417)
+.+.|++.|++.+...+.. ..++.|+ ++|++ ..+.... +..+|..+++.+++.+.+.. +||+.+++
T Consensus 90 ~~~~~~l~g~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~-~~~~g~~~~~~~~~~~~~~~--~~~~~~~~ 158 (352)
T cd06174 90 LLVGRFLLGLGGGALYPAA-AALIAEWFPPKERGR-------ALGLFSA-GFGLGALLGPLLGGLLAESL--GWRWLFLI 158 (352)
T ss_pred HHHHHHHHHcccccccHhH-HHHHHHhCCccchhh-------hhhHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHH
Confidence 9999999999999988887 6788888 23333 2232222 25666677777777777776 89999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCC--
Q 014832 204 AACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI-- 281 (417)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (417)
.++..++..+... ..+ |+.+...+...+... .......+.|.+.++..+.
T Consensus 159 ~~~~~~~~~~~~~-~~~--------------------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 210 (352)
T cd06174 159 LAILGLLLALLLL-FLL--------------------------RLLLLLALAFFLLSF-GYYGLLTYLPLYLQEVLGLSA 210 (352)
T ss_pred HHHHHHHHHHHHH-HHH--------------------------HHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHhcCCCH
Confidence 8887777666554 222 233334333333333 3334445678877764333
Q ss_pred -ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccc-hHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHH
Q 014832 282 -PHGFIFATFMLASMLGSSLASRLMARSPPRVES-YMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFC 359 (417)
Q Consensus 282 -~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (417)
+.+.......++..++.++.+++.||+++| + .+..+..+..++........ +.+.......
T Consensus 211 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~---------------~~~~~~~~~~ 273 (352)
T cd06174 211 AEAGLLLSLFGLGGILGALLGGLLSDRLGRR--RLLLLIGLLLAALGLLLLALAP---------------SLALLLVALL 273 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHhc---------------cHHHHHHHHH
Confidence 346667788889999999999999999988 6 67777776666666555544 4567778888
Q ss_pred HHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhc
Q 014832 360 TFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVC 408 (417)
Q Consensus 360 l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~ 408 (417)
+.+++.+...+...++..|..|+++|++.+|+.+...+++..++.....
T Consensus 274 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g 322 (352)
T cd06174 274 LLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAG 322 (352)
T ss_pred HHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999998888887776543
No 70
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.94 E-value=2.8e-24 Score=202.28 Aligned_cols=336 Identities=14% Similarity=0.090 Sum_probs=211.2
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHH-HHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-
Q 014832 40 NNYLLVYSLMMAGDWLQGPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI- 117 (417)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~l~~l-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~- 117 (417)
|......++.....+...|++|.. .+++|.|+.+.|++.+...++..+++++.|+++||+||||.++.+....+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~ 84 (396)
T TIGR00882 5 WMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAP 84 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 444444445555566677888854 467999999999999999999999999999999999999999887666554433
Q ss_pred H---hcCc-----hHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 014832 118 T---KHSP-----QYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL 188 (417)
Q Consensus 118 ~---~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~ 188 (417)
. ...+ .+..+.+.|++.|++.+...+.. ..+..|. ++++.. ++..... ..+|..+++.+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~-------~g~~~~~-~~~g~~~g~~~~g~ 155 (396)
T TIGR00882 85 FFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAI-EAYIEKVSRNSNFE-------YGKARMF-GCVGWALCASIAGI 155 (396)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhH-HHHHHHhhhhcccc-------cchhhhh-cccHHHHHHHHHhh
Confidence 2 1122 23345667888888888777776 4566554 222211 1111112 34555666666665
Q ss_pred hhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCch----hHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHH
Q 014832 189 LVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESK----DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMY 264 (417)
Q Consensus 189 ~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (417)
+.+ . +||.+|++.+.+.++..++.+...||+++++++++ ++.++..++.++++|+|+++...+....... .+
T Consensus 156 l~~-~--~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~-~~ 231 (396)
T TIGR00882 156 LFS-I--DPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVAC-VY 231 (396)
T ss_pred hhc-c--CchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHH-HH
Confidence 543 3 99999999888777666555433343322111000 0111112456788899887666554433332 22
Q ss_pred HHHHhhhccccCCC-----CCC-ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccC
Q 014832 265 TFVFLWTPALSPND-----EEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVA 338 (417)
Q Consensus 265 ~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 338 (417)
.....+.|.|.++. .+. ..+...+...+...++.+..+++.||+|+| +.+..+..+.++.........
T Consensus 232 ~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~--~~l~~~~~l~~l~~~~~~~~~---- 305 (396)
T TIGR00882 232 DVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK--NALLIAGTIMSVRIIGSSFAT---- 305 (396)
T ss_pred HHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--hhHHHHHHHHHHHHHHHHhcC----
Confidence 22333455554431 121 235666677778888899999999999988 777766666655544433333
Q ss_pred CCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccc-cccchhHHHHHHHH
Q 014832 339 PSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF-FRIPLNIFVCVVLY 405 (417)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~-~~~~~~~~~~~~~~ 405 (417)
+.+......++.+++..........+..+..|++.++++.+. .+...+++..++..
T Consensus 306 -----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~ 362 (396)
T TIGR00882 306 -----------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLST 362 (396)
T ss_pred -----------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHH
Confidence 445555666677776655555556677888888888887766 45666777666654
No 71
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94 E-value=2.1e-24 Score=204.72 Aligned_cols=338 Identities=13% Similarity=0.074 Sum_probs=202.7
Q ss_pred hhHHHHHHHHHHHHhhhhhhhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH
Q 014832 39 KNNYLLVYSLMMAGDWLQGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI 117 (417)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~ 117 (417)
.|......++..+..+...|++| .+.+++|+|+.++|++.++..++..+++++.|+++||+||||++.++....+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 91 (420)
T PRK09528 12 YWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFG 91 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 34444444455555566678887 44566999999999999999999999999999999999999999887665554433
Q ss_pred -Hhc---Cc-----hHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 014832 118 -TKH---SP-----QYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (417)
Q Consensus 118 -~~~---~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~ 187 (417)
... ++ ......+.++..|.+.....+.. ..+..+. +++++. ++..... ..+|..+++.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~-------~g~~~~~-~~~g~~i~~~~~g 162 (420)
T PRK09528 92 PFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAI-EAYIERVSRRSGFE-------YGRARMW-GSLGWALCAFIAG 162 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhh-hhHHHHHHhhcccc-------chhhHHh-hhHHHHHHHHHHH
Confidence 211 11 11112223333333333322333 2233222 222221 1112222 3455566666666
Q ss_pred hhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCC---C-CchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHH
Q 014832 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP---S-ESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (417)
Q Consensus 188 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (417)
.+.+. +|+.+|++.++..++..++.+...+|+++++ + +++++++...++.++.+|+|+++.+.+........
T Consensus 163 ~l~~~---~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~- 238 (420)
T PRK09528 163 ILFNI---NPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACF- 238 (420)
T ss_pred HHHhc---CchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHH-
Confidence 66543 8999999988777766665553333332221 0 10011111123455678888766554433332222
Q ss_pred HHHHHhhhccccCC-----CCC-CChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhcc
Q 014832 264 YTFVFLWTPALSPN-----DEE-IPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLV 337 (417)
Q Consensus 264 ~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 337 (417)
+.....+.|.|..+ +.+ ...+.+.+...++..++.++.|++.||+|+| +.+..+..+..+...+..+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~~~~~~~l~~~~~~l~~~~~--- 313 (420)
T PRK09528 239 YDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK--NALLLAGTIMAVRIIGSGFAT--- 313 (420)
T ss_pred HHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc--hhhHHHHHHHHHHHHHHHhcc---
Confidence 22222245555443 111 1236666777788889999999999999988 777666666666555544433
Q ss_pred CCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccc-cccchhHHHHHHHHH
Q 014832 338 APSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF-FRIPLNIFVCVVLYN 406 (417)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~-~~~~~~~~~~~~~~~ 406 (417)
+.+..+....+.+++.+...+....+..|.+|++.|++..+. .+...+++..++...
T Consensus 314 ------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~ 371 (420)
T PRK09528 314 ------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTL 371 (420)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHH
Confidence 445566667777777777677778899999999999988766 455566666665544
No 72
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.94 E-value=8.4e-24 Score=201.92 Aligned_cols=340 Identities=18% Similarity=0.204 Sum_probs=247.0
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-H
Q 014832 40 NNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-T 118 (417)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~ 118 (417)
+.++....+.++++++....++.+..+..-|+..++++..+..+...+.++++|.++||++|||+++.+.++.++..+ .
T Consensus 13 r~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L 92 (524)
T PF05977_consen 13 RRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLL 92 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHH
Confidence 344555667888889888888777777788999999999999999999999999999999999999999876655433 2
Q ss_pred hc-----CchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Q 014832 119 KH-----SPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF 193 (417)
Q Consensus 119 ~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~ 193 (417)
++ ..+.|.+++.-++.|++.+...|+. .+++.|.-+|.. .....++.... .++...+||.+++.++...
T Consensus 93 ~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~-~A~ip~lV~~~~----L~~A~al~s~~-~niar~iGPalgG~Lva~~ 166 (524)
T PF05977_consen 93 AVLAFFGLLSPWLLLILTFLLGIGSAFFNPAW-QAIIPELVPKED----LPAANALNSIS-FNIARIIGPALGGILVAFF 166 (524)
T ss_pred HHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhccHhh----HHHHHHHHHHH-HHHHHhccchHHHHHHHHH
Confidence 22 2468899999999999999998988 678888822222 22233333222 5555677777777777766
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHhhccccCC-CCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhc
Q 014832 194 SLGPVAPFDAAACFLAIGMVIILSSWTENYG-DPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (417)
Q Consensus 194 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (417)
|-.+.|.+.++..++...... .++++.+ ++.++++..++.++.++.+.++|......+...++...... ....+|
T Consensus 167 --G~~~~f~inalsfl~~i~~l~-~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a-~~aLlP 242 (524)
T PF05977_consen 167 --GAAAAFLINALSFLISILALL-RWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASA-VWALLP 242 (524)
T ss_pred --HHHHHHHHHHHHHHHHHHHHH-HccccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhH-HHHhhh
Confidence 888899988877666555444 4443322 22223333456677788777777765554444443333332 233578
Q ss_pred cccCCCCCC---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccc
Q 014832 273 ALSPNDEEI---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISF 349 (417)
Q Consensus 273 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (417)
.+.++..+. ..|.+.+..+++.++|+++.+++.+|++++ +.+..+....+++.+.+.+..
T Consensus 243 l~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~--~lv~~~~~~~a~~~~~lal~~--------------- 305 (524)
T PF05977_consen 243 LFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR--RLVLLASLLFALALLLLALSP--------------- 305 (524)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc--hhhHHHHHHHHHHHHHHhcch---------------
Confidence 887763333 348888999999999999999999998776 677777777776666666655
Q ss_pred chhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 350 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
+.+...+.+++.|++........++..++..|++.||+++|+.++..+.+..+|...
T Consensus 306 ~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll 362 (524)
T PF05977_consen 306 SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLL 362 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 667778888889999888888999999999999999999999888776666555543
No 73
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=4.4e-25 Score=196.35 Aligned_cols=333 Identities=18% Similarity=0.134 Sum_probs=240.9
Q ss_pred HHHHHHhhh-hhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchH
Q 014832 47 SLMMAGDWL-QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQY 124 (417)
Q Consensus 47 ~~~~~~~~~-~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~ 124 (417)
+...+..++ ..+..+.+.+|+|+|++|.+++.++..+...+..++.|.+.||+|.|++..++.++..+-.+ .+++.+.
T Consensus 23 f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~ 102 (417)
T COG2223 23 FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTY 102 (417)
T ss_pred HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccC
Confidence 344444443 36777788899999999999999999999999999999999999999999999999999988 8887544
Q ss_pred ---HHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCC---Cc
Q 014832 125 ---KILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG---PV 198 (417)
Q Consensus 125 ---~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~g---w~ 198 (417)
|++++.+.+.|++.+.. ... ..+++++ ++++++....++.. ..++|..+..+++..+.... + |+
T Consensus 103 ~~~~~ll~~gll~G~~GasF-av~-m~~~s~~----fP~~~qG~AlGI~g--~GN~G~av~q~~~P~v~~~~--g~~~w~ 172 (417)
T COG2223 103 PSTWQLLVIGLLLGLAGASF-AVG-MPNASFF----FPKEKQGLALGIAG--AGNLGVAVAQLVAPLVAVAF--GFLAWR 172 (417)
T ss_pred CchHHHHHHHHHHhccccee-hcc-ccccccc----CChhhhhHHHHHhc--cccccHHHHHHHHHHHHHHH--hhHHHH
Confidence 59999999999997765 444 3478887 33334443444433 24555555555555555555 7 89
Q ss_pred hhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCC
Q 014832 199 APFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND 278 (417)
Q Consensus 199 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (417)
..-.+..+..++..+..++...+.++.+.+.++..+ ...+.+.++++.|.+++.+....+... ....|.|.|+++.
T Consensus 173 ~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~---~~~~~v~~~~~~W~lsllY~~tFG~Fv-gfs~~l~~~~~~~ 248 (417)
T COG2223 173 NVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP---AQLKAVFSNKDTWLLSLLYFATFGGFV-GFSAYLPMYLVTQ 248 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch---hHHHHHhcCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHh
Confidence 988888877777676666555554432222111111 557788899999999998876554444 5666899999996
Q ss_pred CCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHH
Q 014832 279 EEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQL 355 (417)
Q Consensus 279 ~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (417)
++.+ .+.......+.+.+.++.+|+++||+|.+ |.+......++++............ ...+....+
T Consensus 249 fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~--rv~~~~f~~~~~~~~~l~~~~~~~~--------~~~~~~~~~ 318 (417)
T COG2223 249 FGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR--RVTLAVFVGMALAAALLSLFLTGFG--------HGGSFVVFV 318 (417)
T ss_pred cCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch--hHHHHHHHHHHHHHHHHHccccccc--------cCcchHHHH
Confidence 6553 35666777888999999999999999988 8888888888877777666542110 011456666
Q ss_pred HHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHH
Q 014832 356 LGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVL 404 (417)
Q Consensus 356 ~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~ 404 (417)
..+...++..+......+.++...+|++ .|.+.|+.....++|+..-.
T Consensus 319 ~~~l~l~~~~G~GnGsvfk~Ip~if~~~-~G~v~G~vga~G~lGGf~lp 366 (417)
T COG2223 319 AVFLALFVFAGLGNGSVFKMIPVIFPKE-TGAVTGIVGAIGGLGGFFLP 366 (417)
T ss_pred HHHHHHHHHhccCcchheeechHHHHhh-hhHHHHHHHHhccccccchh
Confidence 6677777777777778888888888764 67788887777777654443
No 74
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.93 E-value=6.8e-24 Score=200.26 Aligned_cols=335 Identities=12% Similarity=0.048 Sum_probs=215.7
Q ss_pred HHHHHHHHhhhhhhhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCc-hHHHHHHHHHHHHHHH-HhcC
Q 014832 45 VYSLMMAGDWLQGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRACVTYCLTYILSCI-TKHS 121 (417)
Q Consensus 45 ~~~~~~~~~~~~~~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Gr-r~~~~~~~~~~~~~~~-~~~~ 121 (417)
..++.....+...|.++ .+.+++|.|.+|+|++.+...++..++++++|+++||+|| |+++.++.+..++... ..+.
T Consensus 10 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~ 89 (418)
T TIGR00889 10 MSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQV 89 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 33444555555555555 5667899999999999999999999999999999999965 7788888888888888 8888
Q ss_pred chHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccch----hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCC
Q 014832 122 PQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGF----EQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG 196 (417)
Q Consensus 122 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~----~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~g 196 (417)
++++.+.+.|++.|++.+...+..+. +..+. .+++. ..+... ..+ .+|. .+++.+++.+.... .
T Consensus 90 ~~~~~~~~~~~l~~~~~~~~~~~~~~-l~~~~~~~~g~~~~~~~~~~r-~~G---~lG~----~ig~~l~g~l~~~~--~ 158 (418)
T TIGR00889 90 TTPAGMFPVLLANSLAYMPTIALTNS-ISYANLPQAGLDVVTDFPPIR-VMG---TIGF----IAAMWAVSLLDIEL--S 158 (418)
T ss_pred cCHHHHHHHHHHHHHHHccHHHHHHH-HHHHHHhhcCCCchhcCCCee-eeh---hHHH----HHHHHHHHHhcccc--h
Confidence 99999999999999987777666533 32111 11110 000000 111 1334 44444544442111 3
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccccCCCCCCc-hhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhcccc
Q 014832 197 PVAPFDAAACFLAIGMVIILSSWTENYGDPSES-KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (417)
Q Consensus 197 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (417)
|+ +|++.++..++..++.+ ..||++++++++ ++..+..+.+.++++|+|+++.+.+...+...... ....+.|.+.
T Consensus 159 ~~-~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 235 (418)
T TIGR00889 159 NI-QLYITAGSSALLGVFAL-TLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQ-ITNIFGNGFL 235 (418)
T ss_pred hH-HHHHHHHHHHHHHHHHh-cCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHH-HHHHhHHHHH
Confidence 43 46666665555554443 566654222211 11111112234567888887766665555433322 2334566666
Q ss_pred CC-CCC---------CChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 014832 276 PN-DEE---------IPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (417)
Q Consensus 276 ~~-~~~---------~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (417)
++ +.+ ...+...+...+..+++.+..+++.||+|+| +.+..+..+..+.......... .
T Consensus 236 ~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r--~~l~~~~~~~~v~~~l~~~~~~--~------- 304 (418)
T TIGR00889 236 HEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK--KVMLLSLVAWALRFGFFAYGDP--E------- 304 (418)
T ss_pred HHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHcCc--c-------
Confidence 54 221 1236666777788999999999999999988 7777777766665544433220 0
Q ss_pred CcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccc-cchhHHHHHHHHH
Q 014832 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR-IPLNIFVCVVLYN 406 (417)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~~~~~~~~~~~~ 406 (417)
..+.+..++..++.+++.+...+....++.|.+|+++|++++|+.+ ...+++..+|...
T Consensus 305 --~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l 364 (418)
T TIGR00889 305 --YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYIL 364 (418)
T ss_pred --hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 0012445566778888888878888899999999999999999986 5566676666554
No 75
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.93 E-value=2.6e-23 Score=198.60 Aligned_cols=329 Identities=13% Similarity=0.106 Sum_probs=215.2
Q ss_pred hhhhhhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccc----cCchH-HHHHHHHHHHHHHH-HhcCch---
Q 014832 54 WLQGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKR-ACVTYCLTYILSCI-TKHSPQ--- 123 (417)
Q Consensus 54 ~~~~~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr----~Grr~-~~~~~~~~~~~~~~-~~~~~~--- 123 (417)
.+..++++ .+.+++|+++.++|++.++..+..++.+|+.|+++|| +|||| .++.+....+++.+ +...++
T Consensus 16 ~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~ 95 (437)
T TIGR00792 16 AIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSA 95 (437)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCc
Confidence 34445555 4557899999999999999999999999999999998 67755 56677778887777 666553
Q ss_pred ---HHHHHHHHHHHHHHhhhhhhhHHHHHHhhh----cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh---hhc
Q 014832 124 ---YKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV---DSF 193 (417)
Q Consensus 124 ---~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~---~~~ 193 (417)
.+.+++.+++.+++.+...+.. .++..|. ++|++..+. ......+|..+++.+.+.+...+. +..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~-~al~~~~~~~~~~R~~~~~~----~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~ 170 (437)
T TIGR00792 96 TGKLVYAYITYILLGLFYSFVNIPY-WSLVPAITLDPRERESLSTF----RRFGATLGGLLVAVIVLPLVSYFGGGDDKF 170 (437)
T ss_pred chHHHHHHHHHHHHHHHHHhhcccH-hhCcccccCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 4566777888888887765554 4455555 333332222 222333333333333222222211 233
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhcc
Q 014832 194 SLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA 273 (417)
Q Consensus 194 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (417)
+||..+.+.+++.++..++..+..+|++++++++++++.+.++.+++++++|+++...+...+...... ....+.+.
T Consensus 171 --g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 247 (437)
T TIGR00792 171 --GWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFN-IKNGVQVY 247 (437)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-HHcchhhe
Confidence 899999999888777776665566665432111111122345567888899888776665554443333 33334555
Q ss_pred ccCCCCC--CChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccch
Q 014832 274 LSPNDEE--IPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (417)
Q Consensus 274 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (417)
|.++..+ ...+.......++.+++.++.+++.||+|+| +.+..+..+..+......+... +.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~--~~~~~~~~~~~~~~~~~~~~~~--------------~~ 311 (437)
T TIGR00792 248 YFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK--ILFAGGILLMVLGYLIFFFAGS--------------NL 311 (437)
T ss_pred eEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHcch--------------hH
Confidence 5554332 2234555666788899999999999999987 7777776666655544433221 33
Q ss_pred hHHHHHHHHHHHhhhccchhHHHHHhhcCC-------cccccccccccccchhHHHHHHHHH
Q 014832 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIP-------EEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 352 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
+...+..++.+++.+...+..+++.+|..| ++.+|+++|+.+...+++..++...
T Consensus 312 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i 373 (437)
T TIGR00792 312 PLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFL 373 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 555666777888888888889999998875 4567888999888888877776554
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.92 E-value=4.7e-23 Score=218.69 Aligned_cols=319 Identities=15% Similarity=0.058 Sum_probs=212.0
Q ss_pred chHHHHHHHHHHHHhhhhccccccccccCchHHHHH---HHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHH
Q 014832 72 GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT---YCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFES 147 (417)
Q Consensus 72 ~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~---~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 147 (417)
...++..+++.+++.++++++|+++||+|||+++.. +.+...+..+ ....++++.++++|+++|++.+...|+. .
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~-~ 130 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIK-Y 130 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHH-H
Confidence 446788889999999999999999999999998643 2222233333 4445899999999999999999998988 6
Q ss_pred HHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCC
Q 014832 148 WLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG 224 (417)
Q Consensus 148 ~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 224 (417)
+++.++ ++++. .+++.... ..+|.+++|.+++.+.+.. +|++.|...++..++..++.. ..|+++.
T Consensus 131 a~l~~~~~~~~~~~-------a~~~~~~~-~~ig~~igp~l~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 199 (1140)
T PRK06814 131 SILPDHLNKDELLG-------ANALVEAG-TFIAILLGTIIGGLATISG--NFVILVALLMGIAVLGWLASL-FIPKTGN 199 (1140)
T ss_pred HhhHhhcCccccch-------hhHHHHHH-HHHHHHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHh-hCCCCCC
Confidence 788888 33343 33333333 5666677778888877777 999999555454444444333 5555433
Q ss_pred CCCCc---hhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCC---hhHHHHHHHHHHHHHH
Q 014832 225 DPSES---KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGS 298 (417)
Q Consensus 225 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 298 (417)
.+++. .+..++....++.+.+++.++...+...+...... ....+.|.|+++..+.+ .+.+.+...++.+++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~ 278 (1140)
T PRK06814 200 AAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGA-VVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGS 278 (1140)
T ss_pred CCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 22211 11122344567888888888887776665554444 34457999988744433 4777788889999999
Q ss_pred HHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCC------CcccchhHHHHHHHHHHHhhhccchhH
Q 014832 299 SLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG------GISFSGSLQLLGFCTFEACVGIFWPSI 372 (417)
Q Consensus 299 ~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~g~~~~~~~~~~ 372 (417)
+..+++.||..++ +.+..+..+..++.+.+.+........ .... ....+.+...+..++.|++.+...+..
T Consensus 279 ~~~g~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 355 (1140)
T PRK06814 279 FLASKLSEGRITL--LYVPIGALLMGLFGLDLAFASSSVPAE-PAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPL 355 (1140)
T ss_pred HHHHHHhCCceee--eeehHHHHHHHHHHHHHHhcccccccc-cccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999876655 444444444333333222210000000 0000 000044566677788899989888899
Q ss_pred HHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 373 MKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 373 ~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
.+++++..|++.||+++|+.++..+++..++...
T Consensus 356 ~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~ 389 (1140)
T PRK06814 356 FAALQAWANPAHRARVIAANNVLNAAFMVAGTII 389 (1140)
T ss_pred HHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998877766666554
No 77
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.92 E-value=2.1e-22 Score=193.76 Aligned_cols=326 Identities=15% Similarity=0.062 Sum_probs=207.5
Q ss_pred HHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccccc-----CchHH-HHHHHHHHHHHHH-HhcC-
Q 014832 50 MAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKRA-CVTYCLTYILSCI-TKHS- 121 (417)
Q Consensus 50 ~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-----Grr~~-~~~~~~~~~~~~~-~~~~- 121 (417)
.....+..+.+|...++.|.|.+++|.. +.....+ ++++++|+++||+ ||||. +..+.+..+++.. +++.
T Consensus 25 gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~ 102 (491)
T PRK11010 25 GLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLE 102 (491)
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcC
Confidence 3344455788888888899999999986 3333333 5789999999999 99986 6677777777766 6664
Q ss_pred --chHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hccC
Q 014832 122 --PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-SFSL 195 (417)
Q Consensus 122 --~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~-~~~~ 195 (417)
++++.+.+.+++.+++.+...+.. .++..|+ ++|++..+. ...|..+|.++++.+...+.+ ..
T Consensus 103 ~~~~l~~l~~~~~l~~~~~a~~~i~~-~a~~~~~~~~~~rg~~~~i--------~~~g~~lG~llg~~l~~~l~~~~~-- 171 (491)
T PRK11010 103 PGTQLRWLAALAVVIAFCSASQDIVF-DAWKTDVLPAEERGAGAAI--------SVLGYRLAMLVSGGLALWLADRYL-- 171 (491)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcChhhhHHHHHH--------HHHHHHHHHHHHHHHHHHHHhccc--
Confidence 468889999999999999887877 6788888 333332222 223355555666666666666 45
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhcccc
Q 014832 196 GPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (417)
Q Consensus 196 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (417)
|||..|++.++..++..+..+ ..||++++++++++..++..+++++++++++.+...+...+.... ......|.+.|+
T Consensus 172 GWr~~f~i~a~l~ll~~l~~~-~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~-~~~~~~~~~~~l 249 (491)
T PRK11010 172 GWQGMYWLMAALLIPCIIATL-LAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLG-DAFAMSLTTTFL 249 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHH-hcCCCccccccccchhhhHHHHHHHHHcCcCHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 999999999887776655554 456653321111111122234677788777766554444333322 223344667776
Q ss_pred CCCCCCCh---hHHHH-HHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccch
Q 014832 276 PNDEEIPH---GFIFA-TFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (417)
Q Consensus 276 ~~~~~~~~---~~~~~-~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (417)
.+..+.+. +.... ...++.+++.++.|++.||+++| +.+.....+..+..+.......... +.
T Consensus 250 ~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~--~~l~i~~~l~~l~~l~~~~l~~~~~-----------~~ 316 (491)
T PRK11010 250 IRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF--RALMIFGILQGVSNAGYWLLSITDK-----------NL 316 (491)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHHHHHhccc-----------cH
Confidence 54344433 44443 33468899999999999999887 6665554443433322221111000 22
Q ss_pred hHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHH
Q 014832 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVV 403 (417)
Q Consensus 352 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~ 403 (417)
+......++..+..+...+...+...+..|++.+++.+++.+...+++..++
T Consensus 317 ~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~ 368 (491)
T PRK11010 317 YSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYV 368 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 3333444554444555556678888999999999999998887777775544
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.92 E-value=9.6e-23 Score=217.02 Aligned_cols=328 Identities=16% Similarity=0.068 Sum_probs=216.4
Q ss_pred HHHHHhh-hhhhhHHHHHHhcCCCcc--hHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH----Hhc
Q 014832 48 LMMAGDW-LQGPYVYYLYSTYGFGKG--EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI----TKH 120 (417)
Q Consensus 48 ~~~~~~~-~~~~~l~~l~~~~g~s~~--~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~----~~~ 120 (417)
+..+.+. ......+.+.++++.+.+ ..+++.+++.++..++++++|+++||+|||++++.+.++..+..+ +..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~ 99 (1146)
T PRK08633 20 LNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYY 99 (1146)
T ss_pred HhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344443 334455556666766543 468899999999999999999999999999999988766555444 334
Q ss_pred CchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-----
Q 014832 121 SPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS----- 192 (417)
Q Consensus 121 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~----- 192 (417)
.++++.+++.|+++|++.+...+.. .+++.|+ ++|++..+.... + ..+|.++++.+++.+.+.
T Consensus 100 ~~~~~~l~~~r~l~G~~~~~~~~~~-~~~i~~~~~~~~r~~~~~~~~~----~----~~ig~~lg~~l~~~l~~~~~~~~ 170 (1146)
T PRK08633 100 LGWFWLAFAVTFLLGAQSAIYSPAK-YGIIPELVGKENLSRANGLLEA----F----TIVAILAGTALFSFLFESVNGNT 170 (1146)
T ss_pred HccHHHHHHHHHHHHHHHHhhchHH-HhhhHHhcCcccchhhhhHHHH----H----HHHHHHHHHHHHHHHHHhhcccc
Confidence 5789999999999999999988887 6788888 445543333222 2 344445555555555443
Q ss_pred ---ccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCC-----chhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHH
Q 014832 193 ---FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSE-----SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMY 264 (417)
Q Consensus 193 ---~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (417)
+ .+|++.+.+..+...+..++.....|+.+....+ .....+...+.++.+++++.++...+...+......
T Consensus 171 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (1146)
T PRK08633 171 PSEI-LGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQ 249 (1146)
T ss_pred cccc-ccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 1 1344444443333332222222245554322211 111123334567778888877766555544444333
Q ss_pred HHHHhhhccccCCCCCC----ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCC
Q 014832 265 TFVFLWTPALSPNDEEI----PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPS 340 (417)
Q Consensus 265 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 340 (417)
....+.|.|+.+..+. ..+.+.+...++.+++.++.+++.||.+++ +.+.++..+.+++.+......
T Consensus 250 -~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~------ 320 (1146)
T PRK08633 250 -LAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL--GLVPLGALGLALSLFLLPTAP------ 320 (1146)
T ss_pred -HHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc--cchhHHHHHHHHHHHHHHHhh------
Confidence 3444678777663333 246666777888999999999999998877 666666665555555444443
Q ss_pred CCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHH
Q 014832 341 NVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVV 403 (417)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~ 403 (417)
+.+..++..++.+++.+...+...+++.+..|++.||+++|+.++..+++..++
T Consensus 321 ---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~ 374 (1146)
T PRK08633 321 ---------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLF 374 (1146)
T ss_pred ---------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHH
Confidence 445666777888888888888899999999999999999999888877776443
No 79
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.92 E-value=2.4e-22 Score=192.44 Aligned_cols=337 Identities=12% Similarity=0.052 Sum_probs=210.3
Q ss_pred hHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccc-cCchHHHHHHHHHHHHHHH-HhcCchHHH-HHHHHHHHH
Q 014832 59 YVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSCI-TKHSPQYKI-LMIGRILGG 135 (417)
Q Consensus 59 ~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~~~~~~~~~~~~-~~~~~~~~~-l~~~r~l~G 135 (417)
....+.+++|.++++.+++.+.+.....+..+++|+++|| +||||++..+.+++.++.+ ++++++... ++++|.++|
T Consensus 37 l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ 116 (489)
T PRK10207 37 LAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIA 116 (489)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 3336678999999999999999998888888999999999 9999999999999999999 888876444 558999999
Q ss_pred HHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~ 214 (417)
+|.|...+.. .+++.|. .++..+.+.....+..+ .++|..++|.+++++.++. |||+.|++.++..++..+.
T Consensus 117 ig~g~~~~~~-~~li~~~~p~~~~~~~~~~~~~~~~----~nig~~~g~~l~g~l~~~~--gw~~~F~i~~i~~~~~~~~ 189 (489)
T PRK10207 117 VGNGLFKANP-ASLLSKCYPPKDPRLDGAFTLFYMS----INIGSLISLSLAPVIADKF--GYSVTYNLCGAGLIIALLV 189 (489)
T ss_pred hccccccCCH-HHHHHHhcCCCchhhhcchhHHHHH----HHHHHHHHHHHHHHHHHhh--ChHHHHHHHHHHHHHHHHH
Confidence 9999998887 6788887 22211111112223333 5555666666677777777 9999999975533333322
Q ss_pred HH--h-hccccCCCCCC-chhHHHH----------------------H-----------------H--hHHHHHhccchh
Q 014832 215 IL--S-SWTENYGDPSE-SKDLLTQ----------------------F-----------------R--GAAVAIASDEKI 249 (417)
Q Consensus 215 ~~--~-~~~~~~~~~~~-~~~~~~~----------------------~-----------------~--~~~~~~~~~~~~ 249 (417)
.. + ..++.+++.++ +.+.... . . ...++..|+|.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~ 269 (489)
T PRK10207 190 YFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMF 269 (489)
T ss_pred HHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 22 1 11111101111 1110000 0 0 000112333332
Q ss_pred HHHHHHH-HHHHhHHHHHHHhhhccccCC-------CCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-----chH
Q 014832 250 ALLGAIQ-SLFEGSMYTFVFLWTPALSPN-------DEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVE-----SYM 316 (417)
Q Consensus 250 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-----~~l 316 (417)
....+.. .......+....+..+.+.++ +....+........+..++..++.+++.||+++|.. ..+
T Consensus 270 ~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~ 349 (489)
T PRK10207 270 VAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKF 349 (489)
T ss_pred HHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHH
Confidence 2222111 111222222222234445543 222344555566667777888888999999987721 135
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccch
Q 014832 317 QIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPL 396 (417)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 396 (417)
..+..+.+++++.......... ..+...+.+..+...++.+++.+...|...+.+.+..|++.++.++|+..+..
T Consensus 350 ~~G~~l~~~~~~~~~~~~~~~~-----~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~ 424 (489)
T PRK10207 350 TLGMFLCSLGFLTAAAAGMWFA-----DAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQ 424 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-----CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 5565665555443321110000 00011245667788899999999999999999999999999999999999988
Q ss_pred hHHHHHHHHHh
Q 014832 397 NIFVCVVLYNV 407 (417)
Q Consensus 397 ~~~~~~~~~~~ 407 (417)
++++.++....
T Consensus 425 ~ig~~lg~~l~ 435 (489)
T PRK10207 425 AAAFLLGGYVA 435 (489)
T ss_pred HHHHHHHHHHH
Confidence 99888887654
No 80
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.91 E-value=3.5e-22 Score=191.28 Aligned_cols=344 Identities=13% Similarity=0.081 Sum_probs=216.8
Q ss_pred HhhhhhhhHHHH-HHh--cCCCcchHHHHHHHHHHHHhhhhccccccccc-cCchHHHHHHHHHHHHHHH-HhcCchHHH
Q 014832 52 GDWLQGPYVYYL-YST--YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSCI-TKHSPQYKI 126 (417)
Q Consensus 52 ~~~~~~~~l~~l-~~~--~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~~~~~~~~~~~~-~~~~~~~~~ 126 (417)
+.....+.+|.. .++ +|+++.+.|++.+.+.++..++++++|+++|| +||||++.++.++.+++.+ .+++++++.
T Consensus 25 ~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~ 104 (475)
T TIGR00924 25 SYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDL 104 (475)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhH
Confidence 333346777744 455 89999999999999999999999999999999 8999999999999999999 999988899
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHH
Q 014832 127 LMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAA 205 (417)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~ 205 (417)
+.+.|.+.|++.|...+.. .++++|+ +++.. +.+...++..... .++|..+++.+++.+.+.+ ||++.|.+.+
T Consensus 105 ~~~~~~l~g~g~g~~~~~~-~~~~a~~~~~~~~--~~r~~~~~~~~~~-~niG~~ig~~l~g~l~~~~--g~~~~f~~~~ 178 (475)
T TIGR00924 105 IFYGLGTIAVGSGLFKANP-SSMVGKLYERGDM--PRRDGGFTLFYMS-INIGSFISPLLAGVIAENY--GYHVGFNLAA 178 (475)
T ss_pred HHHHHHHHHhccccccCCH-HHHHHHhcCCCCc--ccccceehhHHHH-HHHHHHHHHHHHHHHHHhc--ChHHHHHHHH
Confidence 9999999999999887877 6688877 21110 0111123333333 5666777777888777777 9999999987
Q ss_pred HHHHHHHHHHHhhc---cccCCCCCC-chhHHHHHH--------------------------------------------
Q 014832 206 CFLAIGMVIILSSW---TENYGDPSE-SKDLLTQFR-------------------------------------------- 237 (417)
Q Consensus 206 ~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~-------------------------------------------- 237 (417)
+..+++.+...... ++.++++++ ++++.+..+
T Consensus 179 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (475)
T TIGR00924 179 VGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLA 258 (475)
T ss_pred HHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 65554443332111 111111110 000000000
Q ss_pred -h-HHHHHhccc--hhHHHHHHHHHHHhHHHHHHHhhhccccCC-------CCCCChhHHHHHHHHHHHHHHHHHHHHHh
Q 014832 238 -G-AAVAIASDE--KIALLGAIQSLFEGSMYTFVFLWTPALSPN-------DEEIPHGFIFATFMLASMLGSSLASRLMA 306 (417)
Q Consensus 238 -~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 306 (417)
+ ...+.-|+| ....+.+...++...... ..+..+.+.++ +.+.+.+.+.+...+..++..++..++-.
T Consensus 259 ~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q-~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~ 337 (475)
T TIGR00924 259 FKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQ-MPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWT 337 (475)
T ss_pred HhccCCHHHHhHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 0 000000111 122222222222322222 22224444333 22334677777777777777766554433
Q ss_pred hcCCC---ccch--HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCC
Q 014832 307 RSPPR---VESY--MQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIP 381 (417)
Q Consensus 307 r~g~~---~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p 381 (417)
|.+|| ++.. +..+..+.++++........... .+...+.++.+...++.+++.....|..+++..|..|
T Consensus 338 ~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP 411 (475)
T TIGR00924 338 RLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFAD------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAP 411 (475)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCC
Confidence 33332 1232 35566666666555443211100 0111266788889999999999999999999999999
Q ss_pred cccccccccccccchhHHHHHHHHHhc
Q 014832 382 EEARSTIMNFFRIPLNIFVCVVLYNVC 408 (417)
Q Consensus 382 ~~~r~~~~g~~~~~~~~~~~~~~~~~~ 408 (417)
++.||+++|+......++..++.....
T Consensus 412 ~~~~g~~~g~~~l~~~~g~~l~~~~~~ 438 (475)
T TIGR00924 412 QRLMGQMLGMWFLAQAMGSLLGGYLAT 438 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988888888765543
No 81
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=9.3e-22 Score=182.63 Aligned_cols=321 Identities=18% Similarity=0.202 Sum_probs=208.6
Q ss_pred HhcC--CCcchH----HHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hh---cCchHHHHHHHHHHH
Q 014832 65 STYG--FGKGEI----GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TK---HSPQYKILMIGRILG 134 (417)
Q Consensus 65 ~~~g--~s~~~~----g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~---~~~~~~~l~~~r~l~ 134 (417)
+.+| .++++. +.+.+++.+|.++|+...|.++||+|||..+.++.++..++.+ .. ..++++++.++|++.
T Consensus 47 ~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~ 126 (485)
T KOG0569|consen 47 ERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIV 126 (485)
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4566 444433 5678889999999999999999999999999998777766655 44 457899999999999
Q ss_pred HHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhccCCCchhHHHHHHHHHH
Q 014832 135 GIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNL-LVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~-~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
|+..|...... +.++.|. +.||.. +....++..+|-+++..++-. +... ...|++.+....+++++
T Consensus 127 Gl~~gl~~~~~-pmyl~E~sP~~~RG~~--------g~~~~~~~~~g~ll~~~~~l~~ilGt-~~~W~~l~~~~~i~~~~ 196 (485)
T KOG0569|consen 127 GLACGLSTGLV-PMYLTEISPKNLRGAL--------GTLLQIGVVIGILLGQVLGLPSLLGT-EDLWPYLLAFPLIPALL 196 (485)
T ss_pred HHHhHHHHHHH-HHHHhhcChhhhccHH--------HHHHHHHHHHHHHHHHHHccHHhcCC-CcchHHHHHHHHHHHHH
Confidence 99999988887 8899998 556643 333333344444444333321 2111 12699999998888888
Q ss_pred HHHHHHhhccccCC-------CCCCchhHHHH--------------------------HHhHHHHHhccchhHH---HHH
Q 014832 211 GMVIILSSWTENYG-------DPSESKDLLTQ--------------------------FRGAAVAIASDEKIAL---LGA 254 (417)
Q Consensus 211 ~~~~~~~~~~~~~~-------~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~---~~~ 254 (417)
..+... +.||+++ +++++++..+. ...+++++++++.... +.+
T Consensus 197 ~l~~l~-~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~ 275 (485)
T KOG0569|consen 197 QLALLP-FLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGI 275 (485)
T ss_pred HHHHHh-cCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHH
Confidence 777666 7888743 11111111000 0124667888744322 222
Q ss_pred HH-HHHHhHHHHHHHhhhccccCC-CCCCCh-hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHH
Q 014832 255 IQ-SLFEGSMYTFVFLWTPALSPN-DEEIPH-GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPI 331 (417)
Q Consensus 255 ~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~ 331 (417)
.. ...+.........|...++++ +...+. .......++...+.++++.++.||.||| +.++.+..++.+..+++.
T Consensus 276 ~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR--pLll~~~~~~~~~~~~~~ 353 (485)
T KOG0569|consen 276 VVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR--PLLLISLSLMAVALLLMS 353 (485)
T ss_pred HHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHH
Confidence 22 333444555555566666665 544433 3444567788999999999999999999 888887777776665555
Q ss_pred HHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhcc-chhHHHHHhhcCCcccccccccccccchhHHHHHHH
Q 014832 332 VTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIF-WPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVL 404 (417)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~ 404 (417)
......+. .+ .|-.+..+++.+++.+.++.. .|..+-+.+|++|++.|.+++++......+.+++..
T Consensus 354 ~~~~l~~~-----~~-~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~ 421 (485)
T KOG0569|consen 354 IALFLSNS-----FG-SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVG 421 (485)
T ss_pred HHHHHHHH-----hh-hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHH
Confidence 44322211 00 111123345555555555543 688999999999999999999887776555544443
No 82
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=2.3e-22 Score=188.89 Aligned_cols=318 Identities=20% Similarity=0.179 Sum_probs=222.3
Q ss_pred HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc--hHHHHHHHHHHHHHHhhhh
Q 014832 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP--QYKILMIGRILGGIATSLL 141 (417)
Q Consensus 65 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~--~~~~l~~~r~l~G~~~~~~ 141 (417)
.++++|..|.|++.+..+.|+.+++++.|+++||+|.|+++..+.++.+++++ ...+. +++.+++.|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 46889999999999999999999999999999999999999999999999988 66654 5678899999999999999
Q ss_pred hhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-ccCCCchhHHHHHHHHHHHHHHHHh
Q 014832 142 FSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS-FSLGPVAPFDAAACFLAIGMVIILS 217 (417)
Q Consensus 142 ~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~-~~~gw~~~f~~~~~~~~~~~~~~~~ 217 (417)
+|+. ..+.++| ++|++.. ++. ..|..+|.+++-.+++.+.+. + ||+.+|++.++..++..++.+.
T Consensus 146 ~pa~-~~i~~~W~P~~Ers~~~-------ail-~~g~q~g~v~~mp~sg~lc~s~~--GW~sifY~~g~~g~i~~~~w~~ 214 (466)
T KOG2532|consen 146 FPAI-GSILAKWAPPNERSTFI-------AIL-TAGSQLGTIITMPVSGLLCESSL--GWPSIFYVFGIVGLIWFILWFL 214 (466)
T ss_pred Hhhh-hceeeeECCHHHHHHHH-------HHH-HHHHHHHHHHHHHhHHHHhccCC--CCchHHHHHHHHHHHHHHHHHH
Confidence 9998 7788888 4444322 222 223556667766777777776 6 9999999999998888777664
Q ss_pred hccccCCCCCCch-hHHHH-------------HHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCC--
Q 014832 218 SWTENYGDPSESK-DLLTQ-------------FRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI-- 281 (417)
Q Consensus 218 ~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (417)
...|++.+++... ++++. .+.+++++++++.+|.+.+.........+ ....|.|.|+++.++.
T Consensus 215 ~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~-~l~~y~PtY~~~VL~f~v 293 (466)
T KOG2532|consen 215 FYSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFY-LLLTYLPTYLKEVLGFDV 293 (466)
T ss_pred HhcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHH-HHHHHhhHHHHHHhCCCh
Confidence 5544443322111 11110 12379999999999988887766555444 5666899999984444
Q ss_pred -ChhHHHHHHHHHHHHHHHHHHHHHhhcCCC------ccchHH-HHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhH
Q 014832 282 -PHGFIFATFMLASMLGSSLASRLMARSPPR------VESYMQ-IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSL 353 (417)
Q Consensus 282 -~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~------~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (417)
+.|...++..+...+..++.|.++||+.+| .+|..- ++....+++++.+.+.. .+ +.+.
T Consensus 294 ~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~---~~----------~~~~ 360 (466)
T KOG2532|consen 294 RETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS---DE----------HRLL 360 (466)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC---CC----------cchH
Confidence 347777899999999999999999998552 112221 22222222232222222 10 2233
Q ss_pred HHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhc
Q 014832 354 QLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVC 408 (417)
Q Consensus 354 ~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~ 408 (417)
.++.+.+.....|...+..+.-..+..| +.-+..+|+.+...++...++++..+
T Consensus 361 a~~~l~~~~~~~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg 414 (466)
T KOG2532|consen 361 AVILLTIAIGLSGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVG 414 (466)
T ss_pred HHHHHHHHHHHcccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHhee
Confidence 4444444344444444555555555444 55788999999988888888887654
No 83
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.91 E-value=3.6e-21 Score=181.46 Aligned_cols=317 Identities=15% Similarity=0.053 Sum_probs=198.9
Q ss_pred HHHHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccccc-----CchH-HHHHHHHHHHHHHH-H
Q 014832 46 YSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-----GRKR-ACVTYCLTYILSCI-T 118 (417)
Q Consensus 46 ~~~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-----Grr~-~~~~~~~~~~~~~~-~ 118 (417)
.+.-....++....+|.+.++.|+|.+++|++..+... .+.++++|+++||+ |||| .+..+.+..+++.. .
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l 85 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM 85 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence 33344445666788888888899999999999777665 58899999999999 8876 68888888877777 6
Q ss_pred hcC---chHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 014832 119 KHS---PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (417)
Q Consensus 119 ~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~ 192 (417)
.+. ++++.+.+..++.++..+...+.. .+++.|+ ++|++..+... .|..+|.++++.++..+.+.
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~al~~~~~~~~~r~~~~~~~~--------~g~~~g~i~g~~l~~~l~~~ 156 (402)
T PRK11902 86 AFCPPHAALWPLAGLAVLVAFLSASQDIVF-DAYSTDVLHPEERGAGAAVKV--------LGYRLAMLVSGGLALWLADR 156 (402)
T ss_pred HhcCccchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcChhhhhHHHHHHH--------HHHHHHHHHHhHHHHHHHhc
Confidence 666 357778888888888888887887 5688888 33444333332 23444445555555555542
Q ss_pred -ccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhh
Q 014832 193 -FSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWT 271 (417)
Q Consensus 193 -~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (417)
. |||..|++.++..++..+... ..||++.+++++++..++.++++++++|+|.++...+...+......... .+.
T Consensus 157 ~~--gw~~~f~i~a~~~l~~~l~~~-~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~-~~~ 232 (402)
T PRK11902 157 VL--GWGNTYLLMAGLMLAGALTTL-WAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAG-SLS 232 (402)
T ss_pred cc--CHHHHHHHHHHHHHHHHHHHH-hcCCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHH-HHH
Confidence 4 899999998887666555433 55665433222222223345678889999887766655444443322111 133
Q ss_pred ccccCCCCCCCh---hHHHHHHH-HHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCc
Q 014832 272 PALSPNDEEIPH---GFIFATFM-LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGI 347 (417)
Q Consensus 272 ~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (417)
+.+..+..+.+. +......+ ++.+++.++.+++.||+++| +.+.....+..+..+.........+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~--~~l~~~~~~~~l~~l~~~~~~~~~~--------- 301 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY--RSLMLFGVLQAVSNLGYWVLAVTPK--------- 301 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHHHHHHHhcCC---------
Confidence 334444344433 44443333 45789999999999999877 6665555544443333222111000
Q ss_pred ccchhHHHHHH----HHHHHhhhccchhHHHHHhhcCCccccccccc
Q 014832 348 SFSGSLQLLGF----CTFEACVGIFWPSIMKMRSQYIPEEARSTIMN 390 (417)
Q Consensus 348 ~~~~~~~~~~~----~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g 390 (417)
+.+...... +..++..+...+....++++.+|.+.++...+
T Consensus 302 --~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (402)
T PRK11902 302 --HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSA 346 (402)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 223333333 34455666667778888888888777664333
No 84
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.90 E-value=4.8e-21 Score=169.53 Aligned_cols=329 Identities=18% Similarity=0.171 Sum_probs=232.2
Q ss_pred HHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-H---hcCch
Q 014832 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-T---KHSPQ 123 (417)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~---~~~~~ 123 (417)
+..+.+....+.+|.+.+.++++..|.+++..+++.++.+.+++.|++.||+|+|+.++.++.++++++. + +...+
T Consensus 24 l~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~ 103 (422)
T COG0738 24 LWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKS 103 (422)
T ss_pred HHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 3344455668999999999999999999999999999999999999999999999999999999999988 5 35568
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-----------
Q 014832 124 YKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS----------- 192 (417)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~----------- 192 (417)
+..++++-++.|.|.+...+++ ..++....+... ...-.+....+ +.+|+.++|.+++.++..
T Consensus 104 y~~FL~~lFila~Gi~~Letaa-Np~v~~lg~~~~----a~~rlnl~q~f-n~lGa~~gp~~g~~lils~~~~~~~~~~~ 177 (422)
T COG0738 104 YGFFLVALFILASGIGLLETAA-NPYVTLLGKPES----AAFRLNLAQAF-NGLGAILGPLLGSSLILSGVALTMSAAQI 177 (422)
T ss_pred HHHHHHHHHHHHhhhHHHHhcc-chHHHHhCCchh----HHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhccCHHHH
Confidence 8999999999999999998888 458877722111 11123444455 666777777777766551
Q ss_pred ---c---cCCCchhHHHHHHHHHHHHHHHH-hhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHH
Q 014832 193 ---F---SLGPVAPFDAAACFLAIGMVIIL-SSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYT 265 (417)
Q Consensus 193 ---~---~~gw~~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (417)
. ...|+.+|...+....+..+... .+.|+.+..+++..+.. +....+++|+|+.+...+..++..+.-..
T Consensus 178 ~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~---~~~~~~l~~~~~~~~gvl~~FlYVG~Eva 254 (422)
T COG0738 178 LAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASG---SAGLSSLFQNKHLRLGVLAIFLYVGAEVA 254 (422)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccc---cchHHHHHhChHHHHHHHHHHHHHhHHHH
Confidence 0 12488888888766655555443 23344333222211111 11467788999988887777666555443
Q ss_pred HHHhhhccccCCCCCC---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 014832 266 FVFLWTPALSPNDEEI---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNV 342 (417)
Q Consensus 266 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (417)
..+|++.|+.+..+. +.+...+.+..+.++|++++.++.+|+... |.+.....+..+.++...+..
T Consensus 255 -~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~--k~Laf~a~~~ill~~~~~l~~-------- 323 (422)
T COG0738 255 -IGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE--KYLAFYALIAILLLLAVALIG-------- 323 (422)
T ss_pred -HHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHhc--------
Confidence 444788888873332 235555778889999999999999998655 777776666666555555554
Q ss_pred CCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 343 KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 343 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
+ ...+....+.|++++..+|..++...+..| +....+.++.-+ .-+|+.+.+..
T Consensus 324 -------g-~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~m-aivGGAiiP~l 377 (422)
T COG0738 324 -------G-VVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVM-AIVGGAIIPPL 377 (422)
T ss_pred -------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceeeee-heecchHHHHH
Confidence 3 455667778899999999999999999999 433444333222 34455555544
No 85
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.90 E-value=1.4e-20 Score=172.34 Aligned_cols=330 Identities=12% Similarity=0.074 Sum_probs=217.5
Q ss_pred CCcchhHHHHHHHHHHHHh--hhhhhhHHHHHHhcCCCcch-HHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHH
Q 014832 35 FNSFKNNYLLVYSLMMAGD--WLQGPYVYYLYSTYGFGKGE-IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (417)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~~g~s~~~-~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 111 (417)
++.|++..+.+|....+.+ .......|.+.+|+|+|++| .|.+.++++.++++++++.|+++||+|.|+++..+.+.
T Consensus 22 ~~~W~~~~~~lC~fGF~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~ 101 (511)
T TIGR00806 22 LKSWRVLVLYLCFYGFMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALS 101 (511)
T ss_pred hcchhHHHHHHHHHHHHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 4556665555555444322 23345666888999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 014832 112 YILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (417)
Q Consensus 112 ~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~ 187 (417)
+++..+ .++++++..+.+.|++.|++.|... +. ..++..+ ++|++. .+.. ..|..+|.++++++++
T Consensus 102 Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~-~syI~~WfP~kER~ra-------tsi~-~sg~~vG~~Ia~~L~q 171 (511)
T TIGR00806 102 FVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AY-SSYIFSLVPPSRYQRA-------AAYS-RAAVLLGVFLSSVLGQ 171 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHHHHHHCCHHHHHHH-------HHHH-HHHHHHHHHHHHHHHH
Confidence 999999 9999999999999999999999998 66 6688888 444432 2222 2235666666666666
Q ss_pred hhhhhccCCCchhHHHH---HHHHHHHHHHHHhhccccCC------CC--------------CC-c--hh--H-------
Q 014832 188 LLVDSFSLGPVAPFDAA---ACFLAIGMVIILSSWTENYG------DP--------------SE-S--KD--L------- 232 (417)
Q Consensus 188 ~~~~~~~~gw~~~f~~~---~~~~~~~~~~~~~~~~~~~~------~~--------------~~-~--~~--~------- 232 (417)
. +..+ |||.-+.+. .....++.++.+ .+|..++ ++ ++ . .. .
T Consensus 172 l-l~s~--gWr~y~~Ln~Isl~s~~~a~~~a~-~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (511)
T TIGR00806 172 L-LVTL--GWISYSTLNIISLVFMTFSVFLAL-FLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSF 247 (511)
T ss_pred H-HHhc--CchhHHHHHHHHHHHHHHHHHHHH-hCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHH
Confidence 6 4445 898755443 333333333333 4442211 00 00 0 00 0
Q ss_pred HHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCC---CChhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014832 233 LTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE---IPHGFIFATFMLASMLGSSLASRLMARSP 309 (417)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 309 (417)
.+.....+++..+|+.++...+...+.....+ -..+|....-++..+ .-.|.+-++..+.+.+..+..|++-.+..
T Consensus 248 ~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~-qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~ 326 (511)
T TIGR00806 248 LVRMLSELVTIYRNPQLLLWSLWWVFNSAGYY-LITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWA 326 (511)
T ss_pred HHHHHHHHHHHhcCcchhhhhHHHHHHhhHHH-HHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCch
Confidence 01223345556677777666666655433333 333344443333111 12366666777778888889998855542
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccc
Q 014832 310 PRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIM 389 (417)
Q Consensus 310 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~ 389 (417)
+-....+-+...+.+..++++.... +.|+..+..+++...+....+.....+++....+..|...
T Consensus 327 ~~~~l~l~v~s~~~~gll~~m~~t~---------------~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvF 391 (511)
T TIGR00806 327 RWSKLLIAVVSAIQAGLVFWMSQSH---------------DIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVF 391 (511)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhccc---------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEE
Confidence 2211222233333333333333333 7899999999999999999999999999999999889999
Q ss_pred ccccc
Q 014832 390 NFFRI 394 (417)
Q Consensus 390 g~~~~ 394 (417)
|+.++
T Consensus 392 GiNtf 396 (511)
T TIGR00806 392 GINTF 396 (511)
T ss_pred ecHHH
Confidence 97554
No 86
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=9e-22 Score=185.23 Aligned_cols=328 Identities=12% Similarity=0.028 Sum_probs=226.9
Q ss_pred HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhh
Q 014832 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSL 140 (417)
Q Consensus 62 ~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~ 140 (417)
.+.+|.+....+.+.+.++++++++++++++|.+.||++..+.+....+.+++-.+ .....|++.+++.|++.|+.++.
T Consensus 71 g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~ 150 (495)
T KOG2533|consen 71 GLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESG 150 (495)
T ss_pred CCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcc
Confidence 34588999999999999999999999999999999999988888888888888877 66699999999999999999999
Q ss_pred hhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh----hccCCCchhHHHHHHHHHHHHH
Q 014832 141 LFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD----SFSLGPVAPFDAAACFLAIGMV 213 (417)
Q Consensus 141 ~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~----~~~~gw~~~f~~~~~~~~~~~~ 213 (417)
.+|.. ..+++.| ++|+.+.+..... ..+|.+++++++..+.+ ....|||+.|++.+++.++..+
T Consensus 151 ~wP~~-~~~lg~wy~~~e~g~r~~~~~a~--------~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi 221 (495)
T KOG2533|consen 151 GWPGV-VAILGNWYGKSERGLRMGIWYAS--------ASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGI 221 (495)
T ss_pred cchHH-HHHHHhhcChhhhhhhHHHHHHh--------cchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHh
Confidence 99999 5678887 5555544443332 33333444444444321 1123999999999999888888
Q ss_pred HHHhhccccCCCC---CCch-----hHHH----------HHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhcccc
Q 014832 214 IILSSWTENYGDP---SESK-----DLLT----------QFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (417)
Q Consensus 214 ~~~~~~~~~~~~~---~~~~-----~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (417)
+.++.+|+++.+. ++.+ ++.+ .....+++.++++++|...+...+.....+ ...+|.|.++
T Consensus 222 ~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~-~~~~~lpl~l 300 (495)
T KOG2533|consen 222 VVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNY-GFSYWLPLYL 300 (495)
T ss_pred eEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccc-cHHHHHHHHH
Confidence 8876777665421 1111 0000 123467788999999999999888776666 4555899999
Q ss_pred CCCCC---CChhHHHHHHHHHHHHHHHHHHHHHhhcC----CCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcc
Q 014832 276 PNDEE---IPHGFIFATFMLASMLGSSLASRLMARSP----PRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGIS 348 (417)
Q Consensus 276 ~~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~g----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (417)
++..+ .+...+.....++++++.++.|.++||.. +| ........+.............
T Consensus 301 ~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~--~~~~~~~~~~~~~g~~~l~~~~------------- 365 (495)
T KOG2533|consen 301 KSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARR--LLFIVFLCLYAIIGAISLLAAA------------- 365 (495)
T ss_pred HcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHH--HHHHHHHHHHHHHHHHHHHhhc-------------
Confidence 98332 34456667888999999999999999953 22 2222222222221111111110
Q ss_pred cchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcc-cccccccccccchhHHHHHHHHHhcCCccccc
Q 014832 349 FSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEE-ARSTIMNFFRIPLNIFVCVVLYNVCSSMTFKY 415 (417)
Q Consensus 349 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~-~r~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (417)
..............+.....+......++....+ +|-+..+....+.+.++.++.......+.+.|
T Consensus 366 -~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y 432 (495)
T KOG2533|consen 366 -VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRY 432 (495)
T ss_pred -cchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcch
Confidence 2233334444444555556677777777766554 44455666677788889999888888777765
No 87
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=3.3e-22 Score=175.67 Aligned_cols=309 Identities=17% Similarity=0.172 Sum_probs=215.6
Q ss_pred HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhh
Q 014832 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFS 143 (417)
Q Consensus 65 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (417)
++.+-+++++|+++....+.+.+.+++.|.+.||+|+|..+++|+.....+++ +++.++++.++++|.+||+|.+...+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 45667789999999999999999999999999999999999999999999999 99999999999999999999999988
Q ss_pred hHHHHHHhhh----cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhc
Q 014832 144 AFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSW 219 (417)
Q Consensus 144 ~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 219 (417)
.. .++++|. ++|+. .+++.... .++|-+++|.+++.+.+.. |.+.+|++.++++++...+.+...
T Consensus 179 sg-lamlAd~f~~d~er~~-------vmGialgf-islG~lvgPpfGGilYe~~--Gk~aPFlVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 179 SG-LAMLADVFPEDNERGS-------VMGIALGF-ISLGVLVGPPFGGILYEFA--GKSAPFLVLAIVLLLDGALQLLVI 247 (464)
T ss_pred hh-HHHHHHHcccchhhhH-------HHHHHHHH-HhccceecCCcccchHhhc--CCcCcHHHHHHHHHHHHHHHHhee
Confidence 88 6788887 23333 44444444 6778889999999999998 999999999999999888887555
Q ss_pred cccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCC---CCChhHHHHHHHHHHHH
Q 014832 220 TENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE---EIPHGFIFATFMLASML 296 (417)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 296 (417)
++++.++++.++ ..++++++++|.++.........+.... +..--++.+..+.. +++.|..+.-..+...+
T Consensus 248 ~p~~~~~~~~~~-----~~~~~~Ll~dP~I~~~agai~~~n~~la-fLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~i 321 (464)
T KOG3764|consen 248 EPTEMDPDSTEQ-----GTPMWSLLMDPYILLIAGAITFSNSSLA-FLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAI 321 (464)
T ss_pred CccccCcccccc-----CccHHHHHhCchHhhhhcchhhccchHH-HhCcccHHHHHHhccCCCcceeeeecccccchhc
Confidence 544333322111 3457788999998887766555444433 22222444444422 34557777777788999
Q ss_pred HHHHHHHHHhhcCCCccchHHHHHHHHHHHHHH--HHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHH
Q 014832 297 GSSLASRLMARSPPRVESYMQIVFVVSSVSLLL--PIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMK 374 (417)
Q Consensus 297 ~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 374 (417)
+..+.|.+.||++.. +.+.....+....... ..+.. +...+++.....+++.+.......-
T Consensus 322 g~~lfg~la~k~~~~--~wl~~~~gl~~~G~~~~~iP~~~---------------~~~~L~vp~~~l~~~i~~~dasl~P 384 (464)
T KOG3764|consen 322 GTNLFGKLADKYPHL--RWLLSLGGLATVGVSSGPIPFAT---------------SIAQLWVPNFGLGFGIGLADASLIP 384 (464)
T ss_pred cCchHHHHHHhcCch--hHHHHHHHHHHHHHHhchhHhhh---------------hHHHHhhhhHHHHHHHHHHHHHHhh
Confidence 999999999999865 4443333333222222 11111 2233333334444444443333333
Q ss_pred ---HHhhcCCcc---cccccccccccchhHHHHHHHHHh
Q 014832 375 ---MRSQYIPEE---ARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 375 ---~~~~~~p~~---~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+..|.-..+ ..|..+++...++.++..+|...-
T Consensus 385 ~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~g 423 (464)
T KOG3764|consen 385 TLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFG 423 (464)
T ss_pred hhHHhcchhhccccceeeeHHHHHHHHHHHhhhcccccc
Confidence 333333333 567778888888888777776543
No 88
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.88 E-value=1.4e-19 Score=170.12 Aligned_cols=330 Identities=13% Similarity=-0.014 Sum_probs=199.3
Q ss_pred hhhhhhhHHHHHHhcCCCcchHHHH--HHHHHHHHhhhhccccc-cccccCchHHHHHHHHHH-HHHHH-Hh---cCch-
Q 014832 53 DWLQGPYVYYLYSTYGFGKGEIGQL--FIAGFGSSMLFGTIVGS-LADKQGRKRACVTYCLTY-ILSCI-TK---HSPQ- 123 (417)
Q Consensus 53 ~~~~~~~l~~l~~~~g~s~~~~g~~--~s~~~~~~~~~~~~~G~-l~Dr~Grr~~~~~~~~~~-~~~~~-~~---~~~~- 123 (417)
.++..|++|.+.+|.|.|++++|++ .+...+...+.+|++++ ..||+||||..++...+. +.... .. ...+
T Consensus 17 ~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~ 96 (390)
T TIGR02718 17 IGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAG 96 (390)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhh
Confidence 3455799999999999999999997 46668888889999955 799999999876655332 22222 22 2222
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHH
Q 014832 124 YKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDA 203 (417)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~ 203 (417)
...++....+.++..+...+.. ..+..|. .|++..+. .+.....|..+|..+++...+.+.+.. |||.+|++
T Consensus 97 ~~~~~~~~~~~~~~~a~~d~~~-d~~~~~~-~~~~~~~~----~~~~~~~g~~lG~~~g~~~~~~l~~~~--gw~~~f~~ 168 (390)
T TIGR02718 97 AGWAVGLLACASLASATQDIAT-DGMAAEH-FNGRTLAK----GNAVQIAGVMIGFFGGGAGTLVLFGKF--GQRPAFLL 168 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHh-CCHhhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHh--CHHHHHHH
Confidence 2333444455555555555555 3344444 22221122 222333445666677777777777777 99999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCCh
Q 014832 204 AACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH 283 (417)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (417)
.+++.++..+... ..+|+++++++++ ++..++.++++|+|..+.......+...... ....+.+.|.+| .+.+.
T Consensus 169 ~a~l~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~l~~-~G~s~ 242 (390)
T TIGR02718 169 VACVPLASLVCVL-WLKDRAVASPEAP---LARRASLFRFFRRPLAWSLLALALLSAMTAV-SGFGLSKLYLVD-AGWPL 242 (390)
T ss_pred HHHHHHHHHHHHH-HcCCCCcCccccc---hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHH-HHHHHhhHHHHh-cCCCH
Confidence 9988776666554 3333322211111 1123456778888887666555444443333 333367777776 34433
Q ss_pred ---hHHHHHHH-HHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHH
Q 014832 284 ---GFIFATFM-LASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFC 359 (417)
Q Consensus 284 ---~~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (417)
+....... ...+++.++.|++.||+|+| +.+..+..+................. .+.........
T Consensus 243 ~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~--~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 311 (390)
T TIGR02718 243 EWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW--RTFILGVGLAGSLALLWFAQAAFWLA---------PGIAVAWSCSA 311 (390)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH--HHHHHHHHHHHHHHHHHHHHHHcccC---------CcHHHHHHHHH
Confidence 44444444 35667889999999999887 66666555442322222211110000 02223333344
Q ss_pred HHHHhhhccchhHHHHHhhcCCc-ccccccccccccchhHHHHHHHHHh
Q 014832 360 TFEACVGIFWPSIMKMRSQYIPE-EARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 360 l~g~~~~~~~~~~~~~~~~~~p~-~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+.++..+...+...+...+..++ +.+++.+++.+...+++..++....
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~ 360 (390)
T TIGR02718 312 FGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIA 360 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777777778887777776 8899999998888888887776653
No 89
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=9.7e-21 Score=183.63 Aligned_cols=315 Identities=17% Similarity=0.168 Sum_probs=204.6
Q ss_pred hHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHh
Q 014832 73 EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVA 151 (417)
Q Consensus 73 ~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~ 151 (417)
+.+++.+...++..+++++.|+++|++|||+.++++.+.+.++.+ +++++|+++++++|++.|+|.|...... +.+++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~-piy~s 168 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLA-PVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcc-hhhHh
Confidence 458999999999999999999999999999999999999999999 9999999999999999999999998777 88999
Q ss_pred hh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCC----
Q 014832 152 EH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG---- 224 (417)
Q Consensus 152 ~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~---- 224 (417)
|. +.||......+. ...+|. .++ .+.+...++...+||..+.+..+.+++..+. ....||+++
T Consensus 169 Eiap~~~RG~l~~~~~l----~~~~Gi----~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~ 238 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQL----FITIGI----LLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIE 238 (513)
T ss_pred hcCChhhhHHHHHHHHH----HHHHHH----HHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHH
Confidence 98 455543333333 222333 222 2222222110028999999988888887777 447777642
Q ss_pred --CCCCchhHHHHH---------------H------------h-HHHHHhcc--ch-hHHHHHHHHHHHhHHHHHHHhhh
Q 014832 225 --DPSESKDLLTQF---------------R------------G-AAVAIASD--EK-IALLGAIQSLFEGSMYTFVFLWT 271 (417)
Q Consensus 225 --~~~~~~~~~~~~---------------~------------~-~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~ 271 (417)
+.+++++..++. + + .+++++++ ++ .........+.+...+.....|.
T Consensus 239 ~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~ 318 (513)
T KOG0254|consen 239 KGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYS 318 (513)
T ss_pred cCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeeh
Confidence 111111110000 0 0 12233321 22 22233333444556666667777
Q ss_pred ccccCC-CCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccc
Q 014832 272 PALSPN-DEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFS 350 (417)
Q Consensus 272 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (417)
+.+++. +.+.+........++...++..+...+.||+||| +.++.+...+.++.++........... .+.....
T Consensus 319 ~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr--~lll~s~~~m~~~~~~~~~~~~~~~~~---~~~~~~~ 393 (513)
T KOG0254|consen 319 TTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRR--KLLLFGAAGMSICLVILAVVGVFALYY---PNSSKGA 393 (513)
T ss_pred HHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHhHHHHHHHHHHHHHHHHHhccC---CCcccch
Confidence 877776 4443333344456677888888889999999999 888888888888777666544321110 0001112
Q ss_pred hhHHHHHHHHHHHhhhc-cchhHHHHHhhcCCcccccccccccccchhHHHHHH
Q 014832 351 GSLQLLGFCTFEACVGI-FWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVV 403 (417)
Q Consensus 351 ~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~ 403 (417)
.+..++...++...+.. ..|..+.+..|.+|.+.|+++.++........+.+.
T Consensus 394 ~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v 447 (513)
T KOG0254|consen 394 GWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI 447 (513)
T ss_pred hHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH
Confidence 23333444333333333 357777899999999999999998776544444433
No 90
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.88 E-value=6.1e-21 Score=181.47 Aligned_cols=346 Identities=14% Similarity=0.126 Sum_probs=254.6
Q ss_pred CCcchhHHHHHHHHHHH-Hhhhh---hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHH
Q 014832 35 FNSFKNNYLLVYSLMMA-GDWLQ---GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (417)
Q Consensus 35 ~~~~~~~~~~~~~~~~~-~~~~~---~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 110 (417)
...|-|.+....++... .+++. +.+.+.+.++++.+.++++|+.++......+..|+.+.+.||+|.|++.+.|.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 45577877777665544 34443 567778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HhcCchHHHHHHH-HHHHHHHhhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014832 111 TYILSCI-TKHSPQYKILMIG-RILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (417)
Q Consensus 111 ~~~~~~~-~~~~~~~~~l~~~-r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~ 186 (417)
+.+++.+ ..+++++|++++. -++.|+|.+..+... ...+..+ +||+.. +.....|.++|..+-|.+.
T Consensus 120 v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~pa-iviv~~YF~kkR~lA--------~Gia~~GsG~G~~~~~~l~ 190 (509)
T KOG2504|consen 120 VAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPA-VVILGTYFEKKRALA--------TGIAVSGTGVGTVVFPPLL 190 (509)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcch-hhhhhhHhHHHHHHH--------HhhhhccCCcceeeHHHHH
Confidence 9999999 9999999888665 589999999998877 5677776 555542 2233456888889889999
Q ss_pred hhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCC-------------------------C----CC-Cc------h
Q 014832 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG-------------------------D----PS-ES------K 230 (417)
Q Consensus 187 ~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~-------------------------~----~~-~~------~ 230 (417)
..+.+.+ |||..+++.+.+.+-..+......|...+ + .+ .. +
T Consensus 191 ~~l~~~~--G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (509)
T KOG2504|consen 191 KYLLSKY--GWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNL 268 (509)
T ss_pred HHHHHHh--CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccch
Confidence 9999999 99999999887766555555534441000 0 00 00 0
Q ss_pred hH-------HH--HHHhHH----HHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCC-CChhHHHHHHHHHHH
Q 014832 231 DL-------LT--QFRGAA----VAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEE-IPHGFIFATFMLASM 295 (417)
Q Consensus 231 ~~-------~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~ 295 (417)
+. .+ ..+... .+++|++.++.+.+...+....... ...++|.|.++ +.+ .+.+...++.++..+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~-p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i 347 (509)
T KOG2504|consen 269 ATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNV-PFVYLPSYAKSLGLSSNDAAFLLSIIGVSDI 347 (509)
T ss_pred hhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcCCChhhhHHHHHHHHHhhh
Confidence 00 00 001112 4788888888888877776555554 44478888886 333 345777789999999
Q ss_pred HHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHH
Q 014832 296 LGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKM 375 (417)
Q Consensus 296 ~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 375 (417)
+++++.|++.|+...+.+....++....+++........ +.+.+....+++|+..+.........
T Consensus 348 ~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~---------------~~~~l~~~~~~fG~~~g~~~~l~~~i 412 (509)
T KOG2504|consen 348 IGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFAT---------------TYVGLIVFSILFGFCVGSFSSLTPVI 412 (509)
T ss_pred hhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhc---------------cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999864422333344444444443333333 55778888899999999988888889
Q ss_pred HhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 376 RSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 376 ~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+.|..+.++-..+.|+..+...++..+|.-..
T Consensus 413 ~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPia 444 (509)
T KOG2504|consen 413 LVDLVGLEKLSNAYGLLLLFQGIGALVGPPIA 444 (509)
T ss_pred HHHHcChhhcchHHHHHHHHhHHHHHcCcccc
Confidence 99999999999999998888888877776543
No 91
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.88 E-value=6.8e-20 Score=176.54 Aligned_cols=335 Identities=15% Similarity=0.074 Sum_probs=208.6
Q ss_pred hhhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccc-cCchHHHHHHHHHHHHHHH-HhcCc-hHHHHHHHHH
Q 014832 57 GPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSCI-TKHSP-QYKILMIGRI 132 (417)
Q Consensus 57 ~~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~~~~~~~~~~~~-~~~~~-~~~~l~~~r~ 132 (417)
.++++ .+.+++|+|+++.+++.+.+........+++|+++|| +|||+++..+.++.+++.. +++++ +.+.+.+.|+
T Consensus 41 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~ 120 (500)
T PRK09584 41 QGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMA 120 (500)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 44555 5568999999999888887766656666789999999 5999999999999999988 88874 5667778899
Q ss_pred HHHHHhhhhhhhHHHHHHhhh-c-ccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHH
Q 014832 133 LGGIATSLLFSAFESWLVAEH-N-KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~-~-~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
++|++.|...+.. ..++.|+ + ++.+.. ..++... .+..+|..++|.+++++.+.+ |||+.|.+.++..++
T Consensus 121 l~gig~g~~~~~~-~~l~~~~f~~~~~~~~----~~~~~~~-~~~~iG~~~gp~i~g~l~~~~--g~~~~F~i~~i~~~i 192 (500)
T PRK09584 121 TIAVGNGLFKANP-SSLLSTCYEKDDPRLD----GAFTMYY-MSINIGSFFSMLATPWLAAKY--GWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHhhhcccCCH-HHHHHHhcCCCchhhh----hcchHHH-HHHHHHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHH
Confidence 9999999887776 5688887 2 222111 1233222 336777788888888888877 999999998764444
Q ss_pred HHHH---HHhhccccCCCCC-CchhHHHH----------------------H-H------------hHHHHHh-----cc
Q 014832 211 GMVI---ILSSWTENYGDPS-ESKDLLTQ----------------------F-R------------GAAVAIA-----SD 246 (417)
Q Consensus 211 ~~~~---~~~~~~~~~~~~~-~~~~~~~~----------------------~-~------------~~~~~~~-----~~ 246 (417)
..+. ..+..+|..++.+ ++.+..+. . + ...++.. .+
T Consensus 193 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (500)
T PRK09584 193 TVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAAR 272 (500)
T ss_pred HHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHH
Confidence 3322 2223333211111 11110000 0 0 0000000 01
Q ss_pred chhHHHHHHHHHHHhHHHHHHHhhhccccCC-----------CCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCC--cc
Q 014832 247 EKIALLGAIQSLFEGSMYTFVFLWTPALSPN-----------DEEIPHGFIFATFMLASMLGSSLASRLMARSPPR--VE 313 (417)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~ 313 (417)
++.+.... ..+.....+. ...-.|.++.. +...+.+...+...+..++..++.+++-+|.++| ..
T Consensus 273 ~~~~~~~~-~~~~~i~f~~-~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~ 350 (500)
T PRK09584 273 RKMIVAFI-LMLEAIIFFV-LYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMP 350 (500)
T ss_pred HHHHHHHH-HHHHHHHHHH-HHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcH
Confidence 22222221 1122222221 11123333221 1223456777777777777777765555555544 22
Q ss_pred chHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccc
Q 014832 314 SYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFR 393 (417)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~ 393 (417)
+.+.++..+.++++..........+ .+...+.++.+...++.+++.....|...+++.+..|++.||+++|+..
T Consensus 351 ~~~~~G~~l~~l~f~~l~~~~~~~~------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~ 424 (500)
T PRK09584 351 HKFAIGMVLCSGAFLVLPLGAKFAN------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWF 424 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 5666777777777766555442111 1112245678888999999999999999999999999999999999887
Q ss_pred cchhHHHHHHHHHh
Q 014832 394 IPLNIFVCVVLYNV 407 (417)
Q Consensus 394 ~~~~~~~~~~~~~~ 407 (417)
+...++..++....
T Consensus 425 l~~a~g~~~~g~~~ 438 (500)
T PRK09584 425 LTTAGAALIAGYVA 438 (500)
T ss_pred HHHHHHHHHHHHHH
Confidence 76667766666554
No 92
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.88 E-value=4.6e-20 Score=171.36 Aligned_cols=341 Identities=18% Similarity=0.152 Sum_probs=226.1
Q ss_pred hhHHHHHHHHHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccC-chHHHHHHHHHHHHHHH
Q 014832 39 KNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-RKRACVTYCLTYILSCI 117 (417)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G-rr~~~~~~~~~~~~~~~ 117 (417)
+.++....++..+..+...|+++...++.|+|..|+|.+.++..+...+.++++|.++||++ +||.+.+..++.++..+
T Consensus 4 ~~rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~ 83 (400)
T PF03825_consen 4 KFRLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALL 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHH
Confidence 44555555566666777789998888999999999999999999999999999999999986 67788888888887777
Q ss_pred -HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHH-Hhhhhhhhhhhcc
Q 014832 118 -TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAIL-SGLFGNLLVDSFS 194 (417)
Q Consensus 118 -~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l-~~~~~~~~~~~~~ 194 (417)
....++++.++...++..+......|..+ ++..+. ++++..-+..+..-+++..++ ... +..+.+.. +..
T Consensus 84 ~~~~~~~f~~~~~~~~l~~~~~~p~~pl~d-si~~~~~~~~~~~YG~iRlwGSiGf~~~----~~~~~~~~~~~~-~~~- 156 (400)
T PF03825_consen 84 LLAFSSSFWWLFVIMLLFSFFFSPTMPLSD-SIALSYLGDRGKDYGRIRLWGSIGFIVA----ALAFGGLLGGYL-GIS- 156 (400)
T ss_pred HHHHhccHHHHHHHHHHHHHHHccHHHHHH-HHHHHHcccccCCCCcchhhhhHHHHHH----HHHHHHHHHhhh-ccc-
Confidence 77888899888888888888777777774 455554 444333344443333443332 111 11122211 111
Q ss_pred CCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccc
Q 014832 195 LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (417)
Q Consensus 195 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (417)
+....+++.+...++.....+ ..|+.+++++++++.+++..++..+++|+|+++...+...+.+.... ....|.+.|
T Consensus 157 -~~~~~~~i~~~~~~ll~~~~l-~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~-~~~~f~~~y 233 (400)
T PF03825_consen 157 -GTSLIFYIAAILSLLLAGFAL-FLPKTPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHA-AYYTFFSIY 233 (400)
T ss_pred -cccHHHHHHHHHHHHHHHHHH-hCCCCccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 233456665555444433333 45554422222222222222344578999998777666655444333 344478888
Q ss_pred cCC-C-CCC-ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccch
Q 014832 275 SPN-D-EEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSG 351 (417)
Q Consensus 275 ~~~-~-~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (417)
+++ + .+. ..+...++..+++++.-...+++.+|+|.+ +.+.++....++=..+...... +.
T Consensus 234 l~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~--~ll~~a~~~~~vR~~l~a~~~~--------------~~ 297 (400)
T PF03825_consen 234 LQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK--WLLLLALVAYAVRWLLYAYFSD--------------PW 297 (400)
T ss_pred HHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHhcC--------------Cc
Confidence 887 3 222 335566677788999999999999999877 8888888777776666655521 22
Q ss_pred hHH----HHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccc-hhHHHHHHHH
Q 014832 352 SLQ----LLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP-LNIFVCVVLY 405 (417)
Q Consensus 352 ~~~----~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~-~~~~~~~~~~ 405 (417)
+.. .....+.|..++..+.....++.|..|++.|+++.++.... ..++..+|.+
T Consensus 298 ~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ 356 (400)
T PF03825_consen 298 PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSL 356 (400)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHH
Confidence 222 22345689999999999999999999999999999987653 3455555443
No 93
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.87 E-value=5.4e-20 Score=175.26 Aligned_cols=326 Identities=13% Similarity=0.062 Sum_probs=213.4
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
...++.+.+|+|-+ ....|+.+...++..+..++.|+++|.+|||..++.+.++..++.+ ++.++|...++.+..+.|
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~G 142 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYG 142 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHH
Confidence 46677888999965 5677999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~ 214 (417)
+|.|..... ...++|. ..|.+.. ..... ..........++.++..+..+. +|||.|++.++...+..+.
T Consensus 143 vgaG~~~~~--~~~isEl~p~k~R~~-----~~~~~-~~~~i~~~~~~~~ia~~~~~~~--~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 143 VGAGVQELA--ALAISELVPNKWRGL-----GLAIA-SIPFIITTWISPLIAQLFAAHS--GWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred HhhHHHHHH--HHHHHHhcccchhhh-----HhHHH-HHHHHhhhcccHHHHHHhccCC--CcchHHHHHHHHHHHHHHH
Confidence 998776543 3457888 2222211 11111 1112223334556665555544 8999999998877666655
Q ss_pred HH-hhccccCCCC-CC---chhHHHHHH--------------------------------------------------h-
Q 014832 215 IL-SSWTENYGDP-SE---SKDLLTQFR--------------------------------------------------G- 238 (417)
Q Consensus 215 ~~-~~~~~~~~~~-~~---~~~~~~~~~--------------------------------------------------~- 238 (417)
.. +..|+++++. .+ .++..++.. +
T Consensus 213 ~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~ 292 (599)
T PF06609_consen 213 IFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEW 292 (599)
T ss_pred HHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhh
Confidence 44 2344432211 11 112122211 0
Q ss_pred ------H--HHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCC--CC----ChhHHHHHHHHHHHHHHHHHHHH
Q 014832 239 ------A--AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE--EI----PHGFIFATFMLASMLGSSLASRL 304 (417)
Q Consensus 239 ------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~g~l 304 (417)
+ -.+++|++|.+...+...+.....++....+.|......+ +. ..+.......++..++..+.+.+
T Consensus 293 ~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l 372 (599)
T PF06609_consen 293 FGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLL 372 (599)
T ss_pred hccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHH
Confidence 0 1246676555444444444444444444445666544322 11 23555566778888888999999
Q ss_pred HhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCccc
Q 014832 305 MARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA 384 (417)
Q Consensus 305 ~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~ 384 (417)
..++++- |..++.+..++.+.+..+...... +....+...++.+++.|..........+-..|++.
T Consensus 373 ~~~ir~~-Kw~li~~~~~~ta~~Gama~~~~~-------------n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ 438 (599)
T PF06609_consen 373 FSKIRHI-KWQLIFGSVLMTAFCGAMAAVRPD-------------NKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED 438 (599)
T ss_pred HHHccch-hHHHHHHHHHHHHHHHHHHHccCC-------------CcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH
Confidence 9888644 344445554444433333332211 22234566777888888877777888888999999
Q ss_pred ccccccccccchhHHHHHHHHHh
Q 014832 385 RSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 385 r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
-|++.|+......+|+.++....
T Consensus 439 ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 439 IGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999998888888888777654
No 94
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.87 E-value=2.6e-21 Score=190.36 Aligned_cols=265 Identities=12% Similarity=0.115 Sum_probs=183.5
Q ss_pred hhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc----------
Q 014832 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP---------- 122 (417)
Q Consensus 54 ~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~---------- 122 (417)
++..+.++.+.++++++.++.|++.+.+.+++.++.++.|++.||+||||.+.++.++.+++++ +++.+
T Consensus 50 g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~ 129 (633)
T TIGR00805 50 GLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYST 129 (633)
T ss_pred HHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccc
Confidence 4556788889999999999999999999999999999999999999999999999999999998 77652
Q ss_pred -----------------------------------------hHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccch
Q 014832 123 -----------------------------------------QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGF 158 (417)
Q Consensus 123 -----------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~ 158 (417)
.+..++++|+++|+|.+..++.. .+++.|+ ++|+.
T Consensus 130 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~-~~~i~d~~~~~~~~~ 208 (633)
T TIGR00805 130 TVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG-ISYIDDFAKSKNSPL 208 (633)
T ss_pred cccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC-chhhhccCCccccHH
Confidence 24567899999999999999988 6799998 33443
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc-c-------------------CCCchhHHHHHHHHHHHHHHHHhh
Q 014832 159 EQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF-S-------------------LGPVAPFDAAACFLAIGMVIILSS 218 (417)
Q Consensus 159 ~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~-~-------------------~gw~~~f~~~~~~~~~~~~~~~~~ 218 (417)
..+. .... ..+|+.+++.+++.+.+.+ + .+|+..|++.+++.++..+..+ .
T Consensus 209 ~~~i----~~~~----~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~-~ 279 (633)
T TIGR00805 209 YIGI----LESI----AVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF-F 279 (633)
T ss_pred HHHH----HHHH----HHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 3222 2222 4444455555544443321 0 1277788888877766655444 4
Q ss_pred ccccCCCC---CC-----ch------h--------HHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccC
Q 014832 219 WTENYGDP---SE-----SK------D--------LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSP 276 (417)
Q Consensus 219 ~~~~~~~~---~~-----~~------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (417)
.|++.+++ ++ .+ + ..++..+..++++++|.++...+...+.....+ ....|.|.|++
T Consensus 280 ~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~-~~~~~lP~yl~ 358 (633)
T TIGR00805 280 FPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFN-GYITFLPKYLE 358 (633)
T ss_pred CccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 44432211 00 00 0 011223456778999998888777666555554 45558999999
Q ss_pred CCCCCCh---hHHHHHHHH-HHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHH
Q 014832 277 NDEEIPH---GFIFATFML-ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLL 329 (417)
Q Consensus 277 ~~~~~~~---~~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~ 329 (417)
+.++.+. +.+.....+ +.+++.+++|++.||++.+.++.+..+.....+..+.
T Consensus 359 ~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 359 NQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 8666654 344444444 5678999999999999877666666666655555433
No 95
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.87 E-value=3e-20 Score=161.48 Aligned_cols=340 Identities=16% Similarity=0.132 Sum_probs=222.4
Q ss_pred CCcchhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHH
Q 014832 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (417)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 110 (417)
+.+++|..........+.+.+. .-..|.+.+.+|.+..|..++....+.++.+++..+|..+|++|||+.+.+..+
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 4567777766655555555433 345556678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014832 111 TYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (417)
Q Consensus 111 ~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~ 186 (417)
...+... .+.++|+..+++.|.+.|+|.|+ .|.. .++-.|. .+|... .+.... ..+|.+....++
T Consensus 152 ~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~-~~~yle~lp~~~r~~~--------~V~~~~-waig~v~ea~la 220 (528)
T KOG0253|consen 152 VTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVD-SAIYLEFLPSSHRWLL--------TVMSFF-WAIGQVFEALLA 220 (528)
T ss_pred HHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHh-HHHHHHhccCcCCCcc--------hhHHHH-HHHHHHHHHHHH
Confidence 9999888 99999999999999999999999 5666 4555565 333321 111122 556667777777
Q ss_pred hhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCC------CCCCchhHHHH-------------------------
Q 014832 187 NLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG------DPSESKDLLTQ------------------------- 235 (417)
Q Consensus 187 ~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~------------------------- 235 (417)
-..+..+ ||||.......+..+.+.+.. ..||+++ +++++-+..++
T Consensus 221 w~vm~~~--gwr~~l~~~~~pl~~~a~f~~-w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e 297 (528)
T KOG0253|consen 221 WGVMSNF--GWRYLLFTSSTPLMFAARFLV-WVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQE 297 (528)
T ss_pred HHHHHhh--hHHHHHHHHHhHHHHHHHHHh-hcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhh
Confidence 7777777 999988877766555555544 5666532 11111100000
Q ss_pred --------------HHhHHHHHhcc---chhHHHHHHHHHHHhHHHHHHHhhhccccCCCC-------------------
Q 014832 236 --------------FRGAAVAIASD---EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE------------------- 279 (417)
Q Consensus 236 --------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 279 (417)
.+.+..+++.. |+.+.+.... +.+...|+..........+.+.
T Consensus 298 ~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iw-fgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c 376 (528)
T KOG0253|consen 298 ESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIW-FGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANC 376 (528)
T ss_pred hhchhhhhhccccccccchHhhcChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcC
Confidence 01122233322 1111111111 1122222222222222222211
Q ss_pred CCCh--hH-HHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHH
Q 014832 280 EIPH--GF-IFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLL 356 (417)
Q Consensus 280 ~~~~--~~-~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (417)
.... .. -.....+....|.++.+++.||+||| +.+....++.+++.+.+.... +.....+
T Consensus 377 ~~s~~~dYrdllitslaefPGlLIt~~iverlGRK--kTMal~l~~f~iflfll~~c~---------------~rn~~tv 439 (528)
T KOG0253|consen 377 PLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK--KTMALSLILFGIFLFLLTTCK---------------TRNAYTV 439 (528)
T ss_pred CccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch--hHHHHHHHHHHHHHHHHHHhc---------------CcchhHH
Confidence 0101 11 11344578899999999999999999 999888888888776665544 2233444
Q ss_pred HHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 357 GFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 357 ~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
..+..-++....+...+.+..|.+|+..|+++.|.+....-+|+++...+
T Consensus 440 llf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~i 489 (528)
T KOG0253|consen 440 LLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVI 489 (528)
T ss_pred HHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHH
Confidence 45555666666778889999999999999999998887777777776643
No 96
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.86 E-value=5.6e-19 Score=154.21 Aligned_cols=320 Identities=15% Similarity=0.128 Sum_probs=225.7
Q ss_pred hhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHH
Q 014832 56 QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILG 134 (417)
Q Consensus 56 ~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~ 134 (417)
..|.++.+.+|+|+|.++.|++.+...+...+.+++..+++.|+|.++.+..++++.+++.+ -... +.+.++.+-.+.
T Consensus 31 vgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~ 109 (395)
T COG2807 31 VGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLA 109 (395)
T ss_pred hhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999988 5555 778889999999
Q ss_pred HHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHH
Q 014832 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~ 214 (417)
|.+.+..+... +.++.+.-+ +........++.....|..+++.+.+.+.... .|||....+-+.+++++++.
T Consensus 110 G~gIav~nVLL-PslIK~~Fp--k~~~~mtglYs~sl~~~aaLaa~lavpla~~~-----~gW~~aL~~WAl~allAl~~ 181 (395)
T COG2807 110 GAGIAVINVLL-PSLIKRDFP--KRVGLMTGLYSTSLGAGAALAAALAVPLAQHS-----GGWRGALGFWALLALLALLI 181 (395)
T ss_pred HhhHHHHHHhh-hHHHHhhcc--cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh-----ccHHHHHHHHHHHHHHHHHH
Confidence 99999988887 777766511 11223333444444455555555555555543 27999999999999988887
Q ss_pred HHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCC-ChhHHHHHHHH
Q 014832 215 ILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEI-PHGFIFATFML 292 (417)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~ 292 (417)
.++...+.+ ..+.+. ...+...++|+|..|.+.+.+.+ +...++....|+|.++.| +.+. +.|...+...+
T Consensus 182 WlPq~~r~~-~~~~~~-----~~~~~~~vw~~~~aW~vtLfmGl-qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l 254 (395)
T COG2807 182 WLPQALREQ-AASIAT-----KLVSVRKVWRSPLAWQVTLFMGL-QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQL 254 (395)
T ss_pred Hhhhccccc-cccccc-----ccccccccccCchhHHHHHHHHh-hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHH
Confidence 664431111 111111 11233457899999988887765 555555777799999988 5544 45778888899
Q ss_pred HHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhH
Q 014832 293 ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSI 372 (417)
Q Consensus 293 ~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 372 (417)
.+++.++....+.+|...+ |........++.+...-+.+.+. + ..+...++.|++.|..+|..
T Consensus 255 ~~~~~~ll~P~la~R~~n~-r~~~~~~~~~~l~G~~G~~~~P~--------------~--~~~lw~~llG~G~G~~F~la 317 (395)
T COG2807 255 AQLPTALLIPLLARRSKNQ-RPLVVLALLLMLVGLVGLLLAPG--------------Q--LPILWALLLGLGQGGAFPLA 317 (395)
T ss_pred HHHHHHHHHHHHHHHhccc-chHHHHHHHHHHHHHHHHHHhhh--------------h--HHHHHHHHHhCccchHHHHH
Confidence 9999999999999985443 23444444444444444444441 1 12222588999999999999
Q ss_pred HHHHhhcCCcccc-cccccccccchhHHHHHHHHHhc
Q 014832 373 MKMRSQYIPEEAR-STIMNFFRIPLNIFVCVVLYNVC 408 (417)
Q Consensus 373 ~~~~~~~~p~~~r-~~~~g~~~~~~~~~~~~~~~~~~ 408 (417)
.+.+.+..++.++ ++-.|+.+-..-+....|+..+.
T Consensus 318 L~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G 354 (395)
T COG2807 318 LTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFG 354 (395)
T ss_pred HHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHh
Confidence 9998888766543 33455555444444555555443
No 97
>PRK09669 putative symporter YagG; Provisional
Probab=99.86 E-value=9.4e-19 Score=167.16 Aligned_cols=329 Identities=12% Similarity=0.091 Sum_probs=194.8
Q ss_pred hhhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccc----cCchH-HHHHHHHHHHHHHH-HhcCch------
Q 014832 57 GPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKR-ACVTYCLTYILSCI-TKHSPQ------ 123 (417)
Q Consensus 57 ~~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr----~Grr~-~~~~~~~~~~~~~~-~~~~~~------ 123 (417)
..+++ .+.+++|+|+.++|.+.++..+..++..|+.|+++|| +|||| .++.+.+..+++.. ....++
T Consensus 29 ~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 29 MLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchH
Confidence 44454 4457899999999999999999999999999999998 78755 45566666666655 444432
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hccCCCchhHH
Q 014832 124 YKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-SFSLGPVAPFD 202 (417)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~-~~~~gw~~~f~ 202 (417)
.+.+++..++.+.+........ .++.+|..++................+|..+++.+...+...+.+ ....+|+..+.
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~-~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~ 187 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPY-CAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMM 187 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchH-HHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHH
Confidence 4556666667776666555555 567777622111111122222233334344444433333332211 00127888888
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCC
Q 014832 203 AAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP 282 (417)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (417)
+.+++.++..+..+...+|+..+++++ +++.+++.++++|||+++.+.....+...... ......+.|.+...+.+
T Consensus 188 i~~ii~~v~~~~~~~~~~e~~~~~~~~---~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~-~~~~~~~y~~~~~~~~~ 263 (444)
T PRK09669 188 VMGLLGVVLFFCCFFMTKERYTPEVDN---SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVV-TRGGATLYYVNYVLLRP 263 (444)
T ss_pred HHHHHHHHHHHHHhCCeEEecCCCCcC---CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHH-HHhhhhheeeeeecCCH
Confidence 888777666655554455543222111 12235667888999987776555443322221 22222333333322221
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHH
Q 014832 283 --HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCT 360 (417)
Q Consensus 283 --~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 360 (417)
.+.......+..+++.++.+++.||+|+| +....+.....+........+. + +.+...+..++
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~--~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~~~~~i 328 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRV--RAFKWTIVAFVILSALIFFIPP--S-----------NVWLIFALNIL 328 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChH--HHHHHHHHHHHHHHHHHHHhCc--c-----------hHHHHHHHHHH
Confidence 13333445567788889999999999887 6666655544433332222210 0 44556667778
Q ss_pred HHHhhhccchhHHHHHhhcCCccc-------ccccccccccchhHHHHHHHH
Q 014832 361 FEACVGIFWPSIMKMRSQYIPEEA-------RSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~~~p~~~-------r~~~~g~~~~~~~~~~~~~~~ 405 (417)
.+++.+...+..+++++|..+.++ .|..+|..+...+++..++..
T Consensus 329 ~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~ 380 (444)
T PRK09669 329 FNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGA 380 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHH
Confidence 899999989999999999886332 334467666666666655544
No 98
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.84 E-value=1.9e-21 Score=173.94 Aligned_cols=357 Identities=12% Similarity=0.003 Sum_probs=219.1
Q ss_pred chhHHHHHHHHHHHHhhhh----hhhHHHHHH-hcC-------CCcchHHHHHHHHHHHHhhhhccccccccccCchHHH
Q 014832 38 FKNNYLLVYSLMMAGDWLQ----GPYVYYLYS-TYG-------FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC 105 (417)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~----~~~l~~l~~-~~g-------~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~ 105 (417)
++...+.+.....+.|+++ ....|.+.. .+| .++...+.+..+..+|..+||++.|++.||+|||+++
T Consensus 38 ~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vY 117 (538)
T KOG0252|consen 38 KHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVY 117 (538)
T ss_pred HHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhh
Confidence 3444445555666677766 222222221 222 4445567889999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HhcCch-------HHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHH
Q 014832 106 VTYCLTYILSCI-TKHSPQ-------YKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLG 174 (417)
Q Consensus 106 ~~~~~~~~~~~~-~~~~~~-------~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g 174 (417)
...+++..++++ ++++.. .+++...|++.|+|.|+.+|.. .+..+|. ++||...+......+.+...|
T Consensus 118 G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlS-AtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 118 GKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLS-ATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcch-HHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 999999999998 777532 5789999999999999999998 7788998 777877777776777777776
Q ss_pred HHHHHHHHhhhhhhhhh-----hccCCCchhHHHHHHHHHHHHHHHHhhccccCCCC----CCchhHHHHH---------
Q 014832 175 NGLVAILSGLFGNLLVD-----SFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDP----SESKDLLTQF--------- 236 (417)
Q Consensus 175 ~~~g~~l~~~~~~~~~~-----~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--------- 236 (417)
..+..++...+-..+-+ +...-||..|.+.++++++.....+ .+||++.-+ ++.+...++.
T Consensus 197 ~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl-~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~ 275 (538)
T KOG0252|consen 197 GIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL-KMPETARYTALVSKKLKQAAGDMKKVLSVDIE 275 (538)
T ss_pred cHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhHHHHhhcCHhhhhhccccccccccc
Confidence 66555554443322222 1112499999998888887777665 677764311 0000000000
Q ss_pred ---------------HhHHHHHhccc---hhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCC---Ch------hHHHH
Q 014832 237 ---------------RGAAVAIASDE---KIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEI---PH------GFIFA 288 (417)
Q Consensus 237 ---------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~------~~~~~ 288 (417)
...+...+..+ +.+..+...++... .++....+....+++ +... +. +....
T Consensus 276 ~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDi-afy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~ 354 (538)
T KOG0252|consen 276 AESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDI-AFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNL 354 (538)
T ss_pred hhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhh-hhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHH
Confidence 00111222222 11112222222222 222333334444442 1111 11 11112
Q ss_pred HHHH-HHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHH-hhh
Q 014832 289 TFML-ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA-CVG 366 (417)
Q Consensus 289 ~~~~-~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~-~~~ 366 (417)
+... +.+.|..+...+.|++||+ +..+.++.++.+..+.+....+... +.....+...+..+ +.-
T Consensus 355 iia~~~~vPGyw~tv~~id~iGRk--~iq~~GF~~~~i~~~~~~~~y~~~~-----------~~~Gf~v~y~l~~ff~NF 421 (538)
T KOG0252|consen 355 IIAVCSTVPGYWFTVYFIDIIGRK--YIQLMGFFIMTIFFFVIAGPYNQLE-----------NTIGFVVLYSLTFFFGNF 421 (538)
T ss_pred HHHHHccCCceeEEEEEeehhhhH--HHHHhhHHHHHHHHHHHcCCccccc-----------ccCceeehHHHHHHHHhc
Confidence 2223 3445778888999999999 8888888888877766655442100 11222333333222 222
Q ss_pred ccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhcCC
Q 014832 367 IFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCSS 410 (417)
Q Consensus 367 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~~~ 410 (417)
..........+|.+|.+.|++..|+...+.-.|..++..-+...
T Consensus 422 GPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~ 465 (538)
T KOG0252|consen 422 GPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYL 465 (538)
T ss_pred CCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHh
Confidence 33456677889999999999999999988888888877765443
No 99
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.84 E-value=3.9e-19 Score=169.00 Aligned_cols=326 Identities=17% Similarity=0.129 Sum_probs=219.2
Q ss_pred hhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccc----ccCchHHHH-HHHHHHHHHHH-HhcC-c-------
Q 014832 58 PYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKRACV-TYCLTYILSCI-TKHS-P------- 122 (417)
Q Consensus 58 ~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~D----r~Grr~~~~-~~~~~~~~~~~-~~~~-~------- 122 (417)
.+++ .+.+.+|+++..+|.+..+.-+..++..|+.|.++| |+||||..+ .+....+++.. +... +
T Consensus 22 ~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 22 SYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhh
Confidence 3444 444677999999999999999999999999999999 899777554 57777777777 5555 4
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh----cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcc-CCC
Q 014832 123 QYKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS-LGP 197 (417)
Q Consensus 123 ~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~-~gw 197 (417)
....+.+..++..++........ .++..|. ++|.+... ........|..+...+.+.+....-+... .+|
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~-~al~~~lt~~~~~R~~l~~----~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~ 176 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPY-NALIPELTPDPDERTRLSS----WRMIFSMIGSLLASFLAPILVSWFGGGDTSNGY 176 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCch-hhcCccccccHhhhhhHHH----HHHHHHHHHHHHHHHHhhhhhhhhccCccchHH
Confidence 22345666677788777776665 5577776 33333222 22233333333333343433333222111 168
Q ss_pred chhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC
Q 014832 198 VAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN 277 (417)
Q Consensus 198 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (417)
++...+.+++.++...+.....+|++++. ++++++.+.++.+++++|||++..+.....+...... ......+.|.++
T Consensus 177 ~~~~~v~~iv~~v~~~i~~~~~ke~~~~~-~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~-~~~~~~~y~~~~ 254 (428)
T PF13347_consen 177 RWMALVLAIVGLVFFLITFFFVKERSVEV-TEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFA-LMNTFLPYYFTY 254 (428)
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeccccc-cccccccccccchhhhcccchHHHHHHHHHHHHhhhh-hhhhHHHHHHHH
Confidence 99998888888888777776777722222 2222233456678889999988777666555433332 333345555555
Q ss_pred --CCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHH
Q 014832 278 --DEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQL 355 (417)
Q Consensus 278 --~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (417)
+.+...+.......++.+++.++.++++||+|+| +....+..+.+++.+...+.... +.+..+
T Consensus 255 vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~--~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 319 (428)
T PF13347_consen 255 VLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKK--KVYIIGLLLAALGFLLLFFLGPG-------------SPWLVL 319 (428)
T ss_pred HhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccce--eehhhhHHHHHHHHHHHHHHHhh-------------hHHHHH
Confidence 2222345566677788999999999999999998 88888888887777766665410 567888
Q ss_pred HHHHHHHHhhhccchhHHHHHhhcCCcc-------cccccccccccchhHHHHHHHH
Q 014832 356 LGFCTFEACVGIFWPSIMKMRSQYIPEE-------ARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 356 ~~~~l~g~~~~~~~~~~~~~~~~~~p~~-------~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
+..++.+++.+..+....++.+|..+.+ +.|..+|+.+....++..++..
T Consensus 320 i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~ 376 (428)
T PF13347_consen 320 ILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGA 376 (428)
T ss_pred HHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHH
Confidence 8999999999999999999999998743 3466677777777666555554
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.83 E-value=3.6e-17 Score=153.93 Aligned_cols=346 Identities=15% Similarity=0.103 Sum_probs=201.8
Q ss_pred HHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccc----ccCchHHHHHH-HHHHHHHHH-HhcCch
Q 014832 50 MAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGRKRACVTY-CLTYILSCI-TKHSPQ 123 (417)
Q Consensus 50 ~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~D----r~Grr~~~~~~-~~~~~~~~~-~~~~~~ 123 (417)
.+....+.++++++.+++|.++.+.+++..+..+...+.+|+.|+++| |+||||.++.+ .....++.+ .+++++
T Consensus 17 q~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~ 96 (477)
T TIGR01301 17 QFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAAD 96 (477)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCch
Confidence 445566678888888999999999999999999999999999999999 59999998875 555555556 777665
Q ss_pred HH-----------------HHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 014832 124 YK-----------------ILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLF 185 (417)
Q Consensus 124 ~~-----------------~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~ 185 (417)
.+ ..+++-.+..++.....+.. .++++|. .++.++.+......+....+|..+|..++.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~-rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 97 IGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPC-RAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred hhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 22333334445666666777 5688888 22211111222222233333333333333321
Q ss_pred h--h---hh----hhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCc-------hhHHHHHHhHHHHHhcc---
Q 014832 186 G--N---LL----VDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES-------KDLLTQFRGAAVAIASD--- 246 (417)
Q Consensus 186 ~--~---~~----~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--- 246 (417)
. . .. .+....+.|..|++.++..+++.++.....+|.+..++++ +.++.+....+++++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 255 (477)
T TIGR01301 176 GLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKY 255 (477)
T ss_pred hHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHH
Confidence 0 0 00 0001125688999998888888877776777754321111 00011111223333332
Q ss_pred --chhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCC--------Chh-----HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014832 247 --EKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEI--------PHG-----FIFATFMLASMLGSSLASRLMARSPP 310 (417)
Q Consensus 247 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~-----~~~~~~~~~~~~~~~~~g~l~dr~g~ 310 (417)
|..+.+++...+.....+.+ ..|.+.|..+ .++. +.| .....+.+...+.+++..++.+|+|+
T Consensus 256 mP~~m~~l~~vqffsW~a~f~~-~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~ 334 (477)
T TIGR01301 256 LPRPVWILLLVTCLNWIAWFPF-ILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGA 334 (477)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44566666655555544433 3355555443 1110 112 12234445556777888999999986
Q ss_pred CccchHHHHHHHHHHHHHHHHHHhhccC---CCCCCCC---CcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcc-
Q 014832 311 RVESYMQIVFVVSSVSLLLPIVTSFLVA---PSNVKSG---GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEE- 383 (417)
Q Consensus 311 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~- 383 (417)
| ++.-..+..+.++++....+....++ +.+.... +.....+..++.+.+.|+.....+...++++++..|++
T Consensus 335 ~-k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~ 413 (477)
T TIGR01301 335 G-KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLG 413 (477)
T ss_pred c-hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccC
Confidence 4 13435665666666666554442110 0000000 00001366778888899999999999999999999954
Q ss_pred -cccccccccccchhH
Q 014832 384 -ARSTIMNFFRIPLNI 398 (417)
Q Consensus 384 -~r~~~~g~~~~~~~~ 398 (417)
..|..+|+.|+...+
T Consensus 414 ~~~G~~mgilN~~I~l 429 (477)
T TIGR01301 414 AGQGLSMGVLNLAIVI 429 (477)
T ss_pred CCCcchhhHHHHHHHH
Confidence 458889987765443
No 101
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=1.3e-18 Score=169.70 Aligned_cols=313 Identities=14% Similarity=0.052 Sum_probs=212.7
Q ss_pred HHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhh
Q 014832 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLF 142 (417)
Q Consensus 64 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~ 142 (417)
.+..+.+.....+..+++++|..+|.++.|+++||+|||++++.++++..++.+ .++++|++.+++.|++.|++.+...
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 356677778888999999999999999999999999999999999999999999 9999999999999999999999998
Q ss_pred hhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhc
Q 014832 143 SAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSW 219 (417)
Q Consensus 143 ~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 219 (417)
... ..++.|. ++|+. .... ... ...++.+++..++++.+ +||+.+++..++..+..++.+ ..
T Consensus 190 ~~~-~~~~~E~~~~~~R~~-------~~~~-~~~-~~~~~~~~~~~~a~~~~----~Wr~~~~~~~~~~~~~~~~~~-l~ 254 (521)
T KOG0255|consen 190 TVG-FGLVAEIVSPKQRGL-------ALTL-GGF-FFVGGLMLPAGAAYITR----DWRWLFWIISIPSGLFLLLWF-LP 254 (521)
T ss_pred HHh-HhhheeecCcchhhH-------HHHH-HHH-HHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHH-cc
Confidence 888 7788998 44443 2222 222 34444555666666554 899999999988877766633 44
Q ss_pred cccCC------CCCCchhHHHHH-------------------H-----------hHHHHHhccchhHHHHHHHHHHHhHH
Q 014832 220 TENYG------DPSESKDLLTQF-------------------R-----------GAAVAIASDEKIALLGAIQSLFEGSM 263 (417)
Q Consensus 220 ~~~~~------~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (417)
||+++ +.+++.+..++. . ..+.++++.++.....+...+.. ..
T Consensus 255 ~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~-~~ 333 (521)
T KOG0255|consen 255 PESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIW-FV 333 (521)
T ss_pred CcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHH-HH
Confidence 45432 211111111110 0 01223344432222222111111 11
Q ss_pred HHHHHhhhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 014832 264 YTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (417)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (417)
+ ....+.-.+.....+.+........+.....+....+...|+.||| .....+..+..++++...+.....
T Consensus 334 ~-~~~y~gl~~~~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~--~~~~~~~~~~~~~~~~~~~~~~~~------ 404 (521)
T KOG0255|consen 334 F-SLVYYGLSLNVSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRR--PPLFLSLFLAGIGLLLFGWLPDDL------ 404 (521)
T ss_pred H-hHHHHhhhhhhhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHhhccc------
Confidence 1 1111222222234455556666666667778888889999999888 777777777777777766665210
Q ss_pred CCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 344 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
..+.......+..++.+..+...+.+..|++|+..|..+.+..+....++..++.+..
T Consensus 405 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~ 462 (521)
T KOG0255|consen 405 ------GGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFP 462 (521)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1024455555566666666777799999999999999999999998888888887765
No 102
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.83 E-value=5.3e-18 Score=163.02 Aligned_cols=333 Identities=13% Similarity=0.115 Sum_probs=196.3
Q ss_pred HhhhhhhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhcccccccc----ccCc-hHHHHHHHHHHHHHHH-HhcCch-
Q 014832 52 GDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----KQGR-KRACVTYCLTYILSCI-TKHSPQ- 123 (417)
Q Consensus 52 ~~~~~~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~D----r~Gr-r~~~~~~~~~~~~~~~-~~~~~~- 123 (417)
......++++..+ +.+|+++.++|.+..+.-+..++..|+.|+++| |+|| |+.++.+....+++.. +...++
T Consensus 21 ~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~ 100 (473)
T PRK10429 21 AIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLF 100 (473)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCC
Confidence 3344456666544 567999999999999999999999999999999 6698 5556667777777755 433321
Q ss_pred -----HHHHHHHHHHHHHHhhhhhhhHHHHHHhhh----cccchhhhHHHHHHHHHHHHHHHHHHHH-Hhhhhhhh---h
Q 014832 124 -----YKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAIL-SGLFGNLL---V 190 (417)
Q Consensus 124 -----~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~l-~~~~~~~~---~ 190 (417)
+..+++..++.+++.....+.. .++..|. ++|.+..+.+.. ...+|..+++.+ .+++ ... .
T Consensus 101 ~~~~~~~~~~~~~~l~~~~~t~~~ip~-~al~~~lt~~~~eR~~l~~~~~~----~~~ig~~~~~~~~~~~~-~~~g~~~ 174 (473)
T PRK10429 101 EGTAQYVFVCVTYILWGMTYTIMDIPF-WSLVPTLTLDKREREQLVPYPRF----FASLAGFVTAGFTLPFV-NYVGGGD 174 (473)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHcchH-HhhhHHhCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH-HHhCCCc
Confidence 3445556667777776666655 5566666 334332322222 222222222222 2222 111 1
Q ss_pred hhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCC--CchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHH
Q 014832 191 DSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPS--ESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVF 268 (417)
Q Consensus 191 ~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (417)
+.. +|+....+.+++.++..+......+|+..+++ ++++++.+.++.++.+++||.++.+.....+... ......
T Consensus 175 ~~~--g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~-~~~~~~ 251 (473)
T PRK10429 175 RGF--GFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNI-ASNIIN 251 (473)
T ss_pred hhh--hHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHH-HHHHHh
Confidence 111 56666666666666555555544565432111 1111122345566777888887766655544443 333444
Q ss_pred hhhccccCCCCCC--ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 014832 269 LWTPALSPNDEEI--PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG 346 (417)
Q Consensus 269 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (417)
.+.+.|.+...+. ..+.......++.+++.++.+++.||+|+| +.+..+..+..++.+..........+
T Consensus 252 ~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk--~~~~~~~~~~~~~~~~~~~~~~~~~~------- 322 (473)
T PRK10429 252 GFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR--ILWAGASIFPVLSCGVLLLMGLAAPH------- 322 (473)
T ss_pred hheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHHHHHHHHhccCch-------
Confidence 4455555542221 224444555678889999999999999988 77766665544444333322110000
Q ss_pred cccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCc-------ccccccccccccchhHHHHHHHH
Q 014832 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPE-------EARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 347 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~-------~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
+.+..++..++.+++.+...+...++.+|..|. +..|..+|.......++..++..
T Consensus 323 ---~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~ 385 (473)
T PRK10429 323 ---NALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAF 385 (473)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHH
Confidence 345556666778888888888889999999763 22333677777766666555543
No 103
>PRK09848 glucuronide transporter; Provisional
Probab=99.82 E-value=1.8e-17 Score=158.65 Aligned_cols=329 Identities=11% Similarity=0.011 Sum_probs=193.1
Q ss_pred hhhhhhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccccc----CchHHH-HHHHHHHHHHHH-H-hc----C
Q 014832 54 WLQGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ----GRKRAC-VTYCLTYILSCI-T-KH----S 121 (417)
Q Consensus 54 ~~~~~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~----Grr~~~-~~~~~~~~~~~~-~-~~----~ 121 (417)
+...++++ .+.+++|+++.++|.+.+...+..++..++.|+++||. ||||.. ..+.+...+... . .. .
T Consensus 25 ~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (448)
T PRK09848 25 AMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWS 104 (448)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCC
Confidence 34445555 44467899999999999999999999999999999996 777755 455444443333 2 22 1
Q ss_pred ch--HHHHHHHHHHHHHHhhhhhhhHHHHHHhhh----cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccC
Q 014832 122 PQ--YKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (417)
Q Consensus 122 ~~--~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~ 195 (417)
++ .+..+....+.+++.+...+.. .++..+. ++|......+....++ .+..++..++|.+....-+....
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~al~~~~~~~~~~r~~~~~~r~~~~~~---~~~~~~~~~~p~i~~~~g~~~~~ 180 (448)
T PRK09848 105 HSSKVVYAYLTYMGLGLCYSLVNIPY-GSLATAMTQQPQSRARLGAARGIAASL---TFVCLAFLIGPSIKNSSPEEMVS 180 (448)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccH-hhhhhhhcCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhCCCchhh
Confidence 11 2334455567777777776655 3444544 3333322222211111 11233334444443322110000
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhcccc
Q 014832 196 GPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (417)
Q Consensus 196 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (417)
+|.....+.+++..+..++.....||+.++++++ ++.++.+++++|||+++...+...+...... ....+.|.|.
T Consensus 181 ~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~----~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~-~~~~~~~~~~ 255 (448)
T PRK09848 181 VYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQ----PSLKISLQTLKRNRPLFMLCIGALCVLISTF-AVSASSLFYV 255 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccC----CCHHHHHHHHhCCchHHHHHHHHHHHHHHHH-HHhhhheeeE
Confidence 1111112223333333333333445543322211 2334567889999998877666555444433 3344577777
Q ss_pred CCCCCCCh--hHHHH-HHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchh
Q 014832 276 PNDEEIPH--GFIFA-TFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGS 352 (417)
Q Consensus 276 ~~~~~~~~--~~~~~-~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (417)
++..+.+. +.... ...++.+++.++.+++.||+|+| +.+..+..+..++.+...+.+. . +.+
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~--~~~~~g~~~~~i~~~~~~~~~~--~-----------~~~ 320 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK--NTFLIGALLGTCGYLLFFWVSV--W-----------SLP 320 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHcCc--h-----------hHH
Confidence 77444432 22222 23456778899999999999887 7777777766665554443221 0 345
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHhhcCCcc-------cccccccccccchhHHHHHHHHH
Q 014832 353 LQLLGFCTFEACVGIFWPSIMKMRSQYIPEE-------ARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 353 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~-------~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
...+...+.+++.+...+...++..|..|++ ++|..+|+.++...++..++...
T Consensus 321 ~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i 381 (448)
T PRK09848 321 VALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSI 381 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 5556677888899998899999999988754 35888888888888877776543
No 104
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.82 E-value=1.6e-17 Score=157.06 Aligned_cols=334 Identities=15% Similarity=0.085 Sum_probs=201.5
Q ss_pred hhhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccccc-CchHHHHHHHHHHHHHHH-HhcCc-hHHHHHHHHH
Q 014832 57 GPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSCI-TKHSP-QYKILMIGRI 132 (417)
Q Consensus 57 ~~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-Grr~~~~~~~~~~~~~~~-~~~~~-~~~~l~~~r~ 132 (417)
..++| .+.+++|+++.+.+.+.+.+.....++.+++|+++||+ ||||++.++.++..++.+ ++..+ +...+.+...
T Consensus 29 ~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~ 108 (493)
T PRK15462 29 RALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLA 108 (493)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Confidence 45565 45578999999999999999999999999999999999 999999999999999887 66543 2233444444
Q ss_pred HHHHHhhhhhhhHHHHHHhhh-ccc-chhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHH
Q 014832 133 LGGIATSLLFSAFESWLVAEH-NKR-GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~-~~r-~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
+.+++.|...+.. +++++|. +++ .+ +...+++.... ..+|+.++|.+.+++.+.+ ||++.|.+.++..++
T Consensus 109 li~iG~G~~~~~~-~alv~elfp~~~~~----R~sgf~i~Y~~-~nlG~~iap~l~g~L~~~~--Gw~~~F~iaaigm~l 180 (493)
T PRK15462 109 IIVCGYGLFKSNV-SCLLGELYEPTDPR----RDGGFSLMYAA-GNVGSIIAPIACGYAQEEY--SWAMGFGLAAVGMIA 180 (493)
T ss_pred HHHHhcccccccH-HHHHHHHCCCCCcc----ccceehHHHHH-HHHHHHHHHHHHHHHHhhh--ChHHHHHHHHHHHHH
Confidence 5556666665655 5678887 221 11 12245555555 4467788888888888877 999999987765444
Q ss_pred HHHHHHhh---ccccCCCCCCchhHHHHH----------------------HhHH--------------------HHHhc
Q 014832 211 GMVIILSS---WTENYGDPSESKDLLTQF----------------------RGAA--------------------VAIAS 245 (417)
Q Consensus 211 ~~~~~~~~---~~~~~~~~~~~~~~~~~~----------------------~~~~--------------------~~~~~ 245 (417)
+.+..... .++..+.++++.++++.. .+.. +.-.+
T Consensus 181 ~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (493)
T PRK15462 181 GLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAEN 260 (493)
T ss_pred HHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44333311 122111111111000000 0000 00000
Q ss_pred ---cchhHHH---HHHHHHHHhHHHHHHHhhhccccCC-------CCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCC-
Q 014832 246 ---DEKIALL---GAIQSLFEGSMYTFVFLWTPALSPN-------DEEIPHGFIFATFMLASMLGSSLASRLMARSPPR- 311 (417)
Q Consensus 246 ---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~- 311 (417)
++|.+.. .+...++........+. +..|.++ +.+.++++..+...+..++.+++.+++-.|..+|
T Consensus 261 ~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~s-l~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~ 339 (493)
T PRK15462 261 QKQRKELGLIVTLTFFSMLFWAFAQQGGSS-ISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGN 339 (493)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCC
Confidence 1222211 12222222222211111 2223322 3345677888888887777777777775555322
Q ss_pred --cc--chHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccc
Q 014832 312 --VE--SYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARST 387 (417)
Q Consensus 312 --~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~ 387 (417)
+. +...++..+.+++++.+........ ++...+.++.+...++.+++.-...|...+.+.++.|++.||.
T Consensus 340 ~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~------~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~ 413 (493)
T PRK15462 340 RTVRIWGKFALGLGLMSAGFCILTLSARWSA------MYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGV 413 (493)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC------CCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHH
Confidence 11 2355666667776665544332111 1112366778888899999999999999999999999999999
Q ss_pred cccccccch-hHHHHHHHH
Q 014832 388 IMNFFRIPL-NIFVCVVLY 405 (417)
Q Consensus 388 ~~g~~~~~~-~~~~~~~~~ 405 (417)
.+|...... .++..++..
T Consensus 414 ~mg~w~l~~~~~~~~~~g~ 432 (493)
T PRK15462 414 LTGIYMLLSGAIANYLAGV 432 (493)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 999976532 455444433
No 105
>PTZ00207 hypothetical protein; Provisional
Probab=99.82 E-value=1e-17 Score=160.85 Aligned_cols=166 Identities=11% Similarity=0.047 Sum_probs=115.4
Q ss_pred cchhHHHHHHHHHHHHhhh---hhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHH
Q 014832 37 SFKNNYLLVYSLMMAGDWL---QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYI 113 (417)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~---~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~ 113 (417)
..+|..+..........+. ...+.|.+.+++|+|.++++++.++.. ....++++.|+++||+|+|+++.++.++..
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 3455555444444443332 256677889999999999999988744 345678789999999999999999999999
Q ss_pred HHHH-HhcC------chHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHH-Hh
Q 014832 114 LSCI-TKHS------PQYKILMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAIL-SG 183 (417)
Q Consensus 114 ~~~~-~~~~------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l-~~ 183 (417)
++.+ ++++ ++++.+++.|++.|+|.+...+.. ...+.++ ++||...+.... . ..+|+.+ ++
T Consensus 103 iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~-~~~i~~~Fp~~RG~a~Gi~~~-------~-~gLGsaI~~~ 173 (591)
T PTZ00207 103 LGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGA-VVTVLSVFPSNRGAVVAIMKT-------F-TGLGSAILGS 173 (591)
T ss_pred HHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhChhhhHHHHHHHHH-------H-HHHHHHHHHH
Confidence 9999 8886 689999999999999999887777 4566777 555553333332 2 3444433 33
Q ss_pred hhhhhhhhhccCCCchhHHHHHHHHHHHHHHHH
Q 014832 184 LFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (417)
Q Consensus 184 ~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~ 216 (417)
+..... . . +|+..|++.+++.++..++..
T Consensus 174 l~~~l~-~-~--~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 174 IQLAFF-S-D--NTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred HHHHHH-H-H--hHHHHHHHHHHHHHHHHHHHH
Confidence 333332 2 2 677777777766655555544
No 106
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.81 E-value=6.2e-18 Score=148.08 Aligned_cols=313 Identities=15% Similarity=0.105 Sum_probs=178.8
Q ss_pred CCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHH
Q 014832 69 FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFES 147 (417)
Q Consensus 69 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 147 (417)
.+..-.|.+.+.+.+.+.+.++.+|.++||+|||+++.+|+...++..+ .+.++|+..+.+.|++.|+..|...+ . .
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v-~-r 142 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSV-I-R 142 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHH-H-H
Confidence 3445568999999999999999999999999999999999999999999 99999997777779999999988744 4 4
Q ss_pred HHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHH----HHHHHHHHHHHhhcc
Q 014832 148 WLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAA----CFLAIGMVIILSSWT 220 (417)
Q Consensus 148 ~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~----~~~~~~~~~~~~~~~ 220 (417)
++++|. +.|+...+..... .++|.++||.+++++....+..=+.+|.... ++..........+.|
T Consensus 143 AiisdV~sek~r~l~ms~v~~a--------~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lp 214 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTA--------FGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLP 214 (451)
T ss_pred HHHHhhcChhhccceeeeeehh--------hhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 689998 4455444433333 3333344444444443310001223333322 222221222224677
Q ss_pred ccCCCCCCc---h---hHHHHHH--h--H---HHHHhccchhHHHHH------HHHHHHhHHHHHHHhhhccccCCCCCC
Q 014832 221 ENYGDPSES---K---DLLTQFR--G--A---AVAIASDEKIALLGA------IQSLFEGSMYTFVFLWTPALSPNDEEI 281 (417)
Q Consensus 221 ~~~~~~~~~---~---~~~~~~~--~--~---~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (417)
|+-+.+++. . +..+..+ . + .....||++...... ..-+.....+....++.+.+...+++.
T Consensus 215 ETL~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ 294 (451)
T KOG2615|consen 215 ETLPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGY 294 (451)
T ss_pred ccccchhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCC
Confidence 764332222 1 0000000 0 0 112344433222111 111112223333333333343344444
Q ss_pred ---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHH-HHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHH
Q 014832 282 ---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQ-IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLG 357 (417)
Q Consensus 282 ---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (417)
+.|.+++..++.+.+.+....+..||.... .+... ....++.-..++..... ....+...
T Consensus 295 ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~-~~a~l~~~l~~~vP~~llls~~~---------------~~~~l~~~ 358 (451)
T KOG2615|consen 295 SSMQQGKVLSTTGLLMLVIQLALVPILPRYKGN-IKAVLLFSLLLIVPAFLLLSLAR---------------TPVVLYLG 358 (451)
T ss_pred ChhhheeeeehhhHHHHHHHHhccccccccccc-hhhHHHHHHHHHHHHHHHHhccc---------------cchhhhHH
Confidence 345555555555555444444444443211 11111 11211211111111111 33566777
Q ss_pred HHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 358 FCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 358 ~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
..+..+......+-.+.++.+..|+++||+++|+.+....++=.+|+..-
T Consensus 359 s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~ 408 (451)
T KOG2615|consen 359 STLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVS 408 (451)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhh
Confidence 78888888888899999999999999999999999998888888877654
No 107
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.80 E-value=1.5e-17 Score=158.91 Aligned_cols=328 Identities=13% Similarity=-0.005 Sum_probs=205.5
Q ss_pred hhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccC-----chHHHHHHHHHH-HHHHH-HhcCchHHHH-HH
Q 014832 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-----RKRACVTYCLTY-ILSCI-TKHSPQYKIL-MI 129 (417)
Q Consensus 58 ~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G-----rr~~~~~~~~~~-~~~~~-~~~~~~~~~l-~~ 129 (417)
...|.+.+++|+|+++++...+...+...+-.+ +|.++||++ ||+.++++.++. .+... .+..++.... .+
T Consensus 47 ~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~ 125 (468)
T TIGR00788 47 PLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAA 125 (468)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 444466678999999999999999999999555 999999998 777788887666 34444 5544554444 44
Q ss_pred HHHHHHHHhhhhhhhHHHHHHhhh-c-ccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHH
Q 014832 130 GRILGGIATSLLFSAFESWLVAEH-N-KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (417)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~-~-~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~ 207 (417)
..++.+++.+...++. -++..|. + +++.....+ +..... ..+|.++++.+++.+.+.+ +|+..|++.+.+
T Consensus 126 ~~~l~~~~~a~~dv~~-da~~~e~~~~~~~~~~~~~----s~~~~~-~~~G~~vg~~l~G~l~~~~--~~~~~f~~~a~l 197 (468)
T TIGR00788 126 FIFLAALAKALYDVLV-DSLYSERIRESPSAGPSLV----SWMWGA-SATGGLISSLLGGPLLDKT--LTRILFLITAAL 197 (468)
T ss_pred HHHHHHHHHHHHHHhH-HHHHhhhhhcCCCcCCCee----eHHHHH-HHHHHHHHHHHHHHHHHhc--CcchHHHHHHHH
Confidence 7889999999988888 4677777 3 222211111 122221 3345566677777777777 999999998887
Q ss_pred HHHHHHHHHhhccccCC--CCCCchh--------------HHHHHHhHHHHHhccchhHHHHHHHHH-HHhHHHHHHHhh
Q 014832 208 LAIGMVIILSSWTENYG--DPSESKD--------------LLTQFRGAAVAIASDEKIALLGAIQSL-FEGSMYTFVFLW 270 (417)
Q Consensus 208 ~~~~~~~~~~~~~~~~~--~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 270 (417)
.++..+... ..+|+++ +.+..++ ..++...+.++.+++|..+...+...+ ...... ....
T Consensus 198 ~ll~~~~~~-~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~-~~~~- 274 (468)
T TIGR00788 198 LLLQLFVSN-LSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPG-ASGS- 274 (468)
T ss_pred HHHHHHHHH-hcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCC-CCce-
Confidence 776644333 6677541 1110000 011112234555677776654443333 111111 1110
Q ss_pred hccccCCCCCC---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHh-hccCCCCCCCCC
Q 014832 271 TPALSPNDEEI---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTS-FLVAPSNVKSGG 346 (417)
Q Consensus 271 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 346 (417)
.-.+..+..+. ..|......+++.+++....++..+|++.| +.+.++..+..++........ ..+. ..
T Consensus 275 ~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r--~~l~~~~~l~~~~~~~~~~l~~~~~~----~~-- 346 (468)
T TIGR00788 275 VFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR--LLFGVTTLLYTLSSLFDLILVKRWNL----AF-- 346 (468)
T ss_pred eEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH--HHHHHHHHHHHHHHhCceeeeecccc----cc--
Confidence 00111222222 347777778889999999999999998877 777776666665543322110 0000 00
Q ss_pred cccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHH
Q 014832 347 ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 347 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
...+.+......++.+++.+..+.....++.+..|++.+|+.+++.+...|++..++..
T Consensus 347 gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~ 405 (468)
T TIGR00788 347 GISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGF 405 (468)
T ss_pred CCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHH
Confidence 00022344555677788888878888999999999999999999999989998887775
No 108
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.78 E-value=3.4e-23 Score=198.54 Aligned_cols=314 Identities=20% Similarity=0.200 Sum_probs=197.3
Q ss_pred hHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc---hHHHHHHHHHHHHHHhhhhhhhHHHH
Q 014832 73 EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP---QYKILMIGRILGGIATSLLFSAFESW 148 (417)
Q Consensus 73 ~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~ 148 (417)
+.+++.+...++..+|+++.|.++||+|||+.+..+..+..++.+ .++++ +++.+.++|++.|++.|...+.. +.
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~-~~ 125 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS-PI 125 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cc
Confidence 467899999999999999999999999999999999999999999 99999 99999999999999999998888 78
Q ss_pred HHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc-cCCCchhHHHHHHHHHHHHHHHHhhccccC-
Q 014832 149 LVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF-SLGPVAPFDAAACFLAIGMVIILSSWTENY- 223 (417)
Q Consensus 149 ~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~-~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~- 223 (417)
++.|. ++|++....... ...+|. .++..++....+.. .++||..+.+..++.++..+... ..||++
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~----~~~~G~----~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~-~~pESP~ 196 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQL----FWALGI----LLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRF-FLPESPR 196 (451)
T ss_pred cccccccccccccccccccc----cccccc----cccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 99998 455543333332 222333 33333322221111 12699999998888766655544 677763
Q ss_pred -----CCCCCchhHHHH-----------------HH------hHHHHHhccch---hHHHHHHH-HHHHhHHHHHHHhhh
Q 014832 224 -----GDPSESKDLLTQ-----------------FR------GAAVAIASDEK---IALLGAIQ-SLFEGSMYTFVFLWT 271 (417)
Q Consensus 224 -----~~~~~~~~~~~~-----------------~~------~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~ 271 (417)
++++++++..++ .+ ..+++++++++ .....+.. ...+.........|.
T Consensus 197 wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~ 276 (451)
T PF00083_consen 197 WLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYS 276 (451)
T ss_pred eecccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 122221111110 00 12445555532 22222222 222233433444456
Q ss_pred ccccCC-CCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHH--HHhhccCCCCCCCCCcc
Q 014832 272 PALSPN-DEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPI--VTSFLVAPSNVKSGGIS 348 (417)
Q Consensus 272 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 348 (417)
|.+.++ +.+.+ -.......+...++.+....+.||+||| +.++.+....+++...+. .....+. + ..
T Consensus 277 ~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr--~~~i~~~~~~~~~~~~~~~~~~~~~~~------~-~~ 346 (451)
T PF00083_consen 277 PSIFENAGISNS-FLATLILGLVNFLGTLLAIFLIDRFGRR--KLLIIGLLLMAICSLILGIIFFLGVSS------S-SW 346 (451)
T ss_pred cccccccccccc-cccccccccccccccccccccccccccc--ccccccccccccccccccccccccccc------c-cc
Confidence 666655 22222 1222344456677777888999999999 787777777666665553 1111100 0 00
Q ss_pred cchhHHHHHHHHHHHhhh-ccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 349 FSGSLQLLGFCTFEACVG-IFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 349 ~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
.....++...+.....+ ...+..+.+..|.+|++.|+++.|+.....+++..++....
T Consensus 347 -~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~ 405 (451)
T PF00083_consen 347 -WSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLF 405 (451)
T ss_pred -cccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 01222233333333333 33467778999999999999999999998888777665543
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.78 E-value=5.9e-17 Score=147.95 Aligned_cols=330 Identities=12% Similarity=0.100 Sum_probs=196.4
Q ss_pred HHHHHHHHHhhhhhhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHH--HHHHH--H
Q 014832 44 LVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY--ILSCI--T 118 (417)
Q Consensus 44 ~~~~~~~~~~~~~~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~--~~~~~--~ 118 (417)
...++..+..+...|+.|... ++.|+|.+++|.+.++..+...+.+|+.|.++||.|.||-++...... ..+.+ .
T Consensus 14 ~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~ 93 (412)
T PF01306_consen 14 LFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIY 93 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 333444445566678888555 458999999999999999999999999999999999766554443322 22222 2
Q ss_pred hcC----chHH-HHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 014832 119 KHS----PQYK-ILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (417)
Q Consensus 119 ~~~----~~~~-~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~ 192 (417)
.+. .|.+ ..+++-+..|+......|..+ +++.+. ++.+..-++.+.. .++|..++..+++.+.+.
T Consensus 94 v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~E-a~~er~sr~~~feYG~~R~w--------GSig~ai~s~~~G~L~~i 164 (412)
T PF01306_consen 94 VFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSE-AYAERVSRRNGFEYGRARMW--------GSIGFAIASLLAGILFNI 164 (412)
T ss_dssp THHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHH-HHHHHHHHHHSS-HHHHHHH--------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH-HHHHHHHHHhcCCcchHHHH--------hhHHHHHHHHHhheeeee
Confidence 222 2222 223333333444444445553 355444 3344444444433 233334444555555443
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHhhccccCCC--CCC--chhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHH-
Q 014832 193 FSLGPVAPFDAAACFLAIGMVIILSSWTENYGD--PSE--SKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFV- 267 (417)
Q Consensus 193 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 267 (417)
+-+..|++....+++..++.....|+..++ .++ ..++++...+...+++|+|++|.+.+...........+-
T Consensus 165 ---~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdq 241 (412)
T PF01306_consen 165 ---NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQ 241 (412)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 446778876665555554444233322211 111 111111123446788899999888776544333333222
Q ss_pred --HhhhccccCC-CCCC-ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 014832 268 --FLWTPALSPN-DEEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (417)
Q Consensus 268 --~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (417)
..|...+.++ +.+. ..|...+.-.+..++.-.+..++.+|+|.| +.++++..++.+=.....+.+
T Consensus 242 qf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k--~~Lllag~i~~iRi~~~~~~~--------- 310 (412)
T PF01306_consen 242 QFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK--NLLLLAGVIMAIRIIGSGFAT--------- 310 (412)
T ss_dssp HHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HHHHHHHHHHHHHHHHHHT-----------
T ss_pred HHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH--hHHHHHHHHHHHHHHHHhhhc---------
Confidence 2233333333 1111 236666777788999999999999999988 999998888888777777777
Q ss_pred CCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCccccccccccc-ccchhHHHHH
Q 014832 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFF-RIPLNIFVCV 402 (417)
Q Consensus 344 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~-~~~~~~~~~~ 402 (417)
+++.....-.+.++-.+.......-++.+.+|++..++...+. ++..+++..+
T Consensus 311 ------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i 364 (412)
T PF01306_consen 311 ------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIII 364 (412)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHH
T ss_pred ------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHH
Confidence 7788888899999999999999999999999999988887774 5555555544
No 110
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.76 E-value=4.5e-15 Score=140.71 Aligned_cols=323 Identities=12% Similarity=0.051 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHhhhhccccccccccCchHHHHHH-HHHHHHHHH-HhcC-c-hHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 014832 74 IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTY-CLTYILSCI-TKHS-P-QYKILMIGRILGGIATSLLFSAFESWL 149 (417)
Q Consensus 74 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~-~~~~~~~~~-~~~~-~-~~~~l~~~r~l~G~~~~~~~~~~~~~~ 149 (417)
.++..++..+..++..|+.|.++|+-|+||.++.. ..+..+++. +.+. + +++...+.-++.-++.+...... .++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfy-na~ 150 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFY-NAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 46778888899999999999999999977766554 444445555 5543 3 34444555555556666655555 567
Q ss_pred Hhhh-cccchhhhH---------------------HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc------cCCCchhH
Q 014832 150 VAEH-NKRGFEQQW---------------------LSITFSKAIFLGNGLVAILSGLFGNLLVDSF------SLGPVAPF 201 (417)
Q Consensus 150 i~~~-~~r~~~~~~---------------------~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~------~~gw~~~f 201 (417)
+.|. +++....+. .....+.+...| .+|.++.-.+.-.+.... ..+-|..+
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~G-y~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALG-YIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHH-HHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 7777 222210000 022334444442 233333222222211111 01358888
Q ss_pred HHHHHHHHHHHHHHHhhccccCC-CCCCc-h----hHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhcccc
Q 014832 202 DAAACFLAIGMVIILSSWTENYG-DPSES-K----DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 275 (417)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (417)
.+.++..++..+..++..||.++ +..+. + ...++..+.+|++.|.|......+...+....... .......|.
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~t-i~~~~~i~a 308 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNT-IISFAGIYA 308 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 88888777766666656776654 22111 1 12345556777777778888777777766655554 444577788
Q ss_pred CCCCCCChh---HHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHH--HhhccCCCCCCCCCcccc
Q 014832 276 PNDEEIPHG---FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIV--TSFLVAPSNVKSGGISFS 350 (417)
Q Consensus 276 ~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 350 (417)
++..+.+.. .......+.+++|+++.+++.||+|.|+++.+........+..+...+ .+... ...+
T Consensus 309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~---------g~~~ 379 (477)
T PF11700_consen 309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFF---------GLKS 379 (477)
T ss_pred HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhccc---------Cccc
Confidence 876666553 333466678999999999999999988666666666555443333333 11000 0004
Q ss_pred hhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhc
Q 014832 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVC 408 (417)
Q Consensus 351 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~ 408 (417)
.+.+.+..++.|+..|..++..-++.+|+.|+++.+..+|++.+.....+.+|+..+.
T Consensus 380 ~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g 437 (477)
T PF11700_consen 380 PWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFG 437 (477)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888889999999999999999999999999999999999998888888887543
No 111
>PRK11462 putative transporter; Provisional
Probab=99.75 E-value=3.2e-15 Score=142.84 Aligned_cols=325 Identities=15% Similarity=0.126 Sum_probs=182.7
Q ss_pred hhhhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccc----cCchHHHH-HHHHHHHHHHH-HhcCch----
Q 014832 55 LQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKRACV-TYCLTYILSCI-TKHSPQ---- 123 (417)
Q Consensus 55 ~~~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr----~Grr~~~~-~~~~~~~~~~~-~~~~~~---- 123 (417)
....++...+ +..|+++..+|.+..+.-+--++..|+.|+++|| +||||..+ ++.+..+++.. +...++
T Consensus 27 ~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~ 106 (460)
T PRK11462 27 NVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMN 106 (460)
T ss_pred HHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcc
Confidence 3345555444 6789999999999999999999999999999996 78876554 56566666666 444442
Q ss_pred --HHHHHHHHHHHHHHhhhhhhhHHHHHHhhh----cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-hccCC
Q 014832 124 --YKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD-SFSLG 196 (417)
Q Consensus 124 --~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~-~~~~g 196 (417)
...+.+..++..++.......- .++.+|. ++|....+. ...+..+|..+++.+...+....-+ ....+
T Consensus 107 ~~~~y~~~~~~~~~~~~t~~~ipy-~al~~~lt~d~~eRt~l~s~----r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g 181 (460)
T PRK11462 107 GKMIYAAITYTLLTLLYTVVNIPY-CALGGVITNDPTQRISLQSW----RFVLATAGGMLSTVLMMPLVNLIGGDNKPLG 181 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccH-HHHHHHhcCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCchhhh
Confidence 3455666667777777766655 5577776 444433333 3333333343443333222222110 00126
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhH--HHHHHHhhhccc
Q 014832 197 PVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGS--MYTFVFLWTPAL 274 (417)
Q Consensus 197 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 274 (417)
|+....+.+++.+++..+.+...+|..+++++ +.+.++.++..++||.++.+.....+.... .......|...|
T Consensus 182 ~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~----~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y 257 (460)
T PRK11462 182 FQGGIAVLSVVAFMMLAFCFFTTKERVEAPPT----TTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTW 257 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeccCCCcc----CCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhh
Confidence 77777777776666665555444554322211 112345677888888876664433222211 111222234444
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHH
Q 014832 275 SPNDEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (417)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (417)
... .+...+.......++.+++.++++++.||+++| +..........+......+.+. . +....
T Consensus 258 ~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk--~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~ 321 (460)
T PRK11462 258 ILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV--TIFWWTNALLAVISLAMFFVPM--Q-----------ASITM 321 (460)
T ss_pred hcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH--HHHHHHHHHHHHHHHHHHHhch--h-----------HHHHH
Confidence 322 111224455667788899999999999999877 5554343333332222222221 0 22233
Q ss_pred HHHHHHHHHhhhccchhHHHHHhhcCCcc-----ccccc--ccccccchhHHHHHHH
Q 014832 355 LLGFCTFEACVGIFWPSIMKMRSQYIPEE-----ARSTI--MNFFRIPLNIFVCVVL 404 (417)
Q Consensus 355 ~~~~~l~g~~~~~~~~~~~~~~~~~~p~~-----~r~~~--~g~~~~~~~~~~~~~~ 404 (417)
.+..++.+++.+...+..+++..|..+.+ +|..+ ++......+++..++.
T Consensus 322 ~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~ 378 (460)
T PRK11462 322 FVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGG 378 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 44455567777776677778888877632 33333 4444455555544443
No 112
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.74 E-value=3.8e-15 Score=137.52 Aligned_cols=332 Identities=15% Similarity=0.119 Sum_probs=218.7
Q ss_pred HhhhhhhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccc----cCchHH-HHHHHHHHHHHHH-HhcCc--
Q 014832 52 GDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKRA-CVTYCLTYILSCI-TKHSP-- 122 (417)
Q Consensus 52 ~~~~~~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr----~Grr~~-~~~~~~~~~~~~~-~~~~~-- 122 (417)
.......++...+ +..|+++..+|.++.+.-+--++..|+.|.++|| +||+|. ++.+.+-.++... +-.++
T Consensus 27 ~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~ 106 (467)
T COG2211 27 AFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDF 106 (467)
T ss_pred HHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCc
Confidence 3344456666555 6789999999999999999999999999999995 787665 5556566666666 55555
Q ss_pred ----hHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh----cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-c
Q 014832 123 ----QYKILMIGRILGGIATSLLFSAFESWLVAEH----NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS-F 193 (417)
Q Consensus 123 ----~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~----~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~-~ 193 (417)
+....++...+.+++.......- .++.+|. +||....+.+....+.+ ..+...+.+.+....-+. .
T Consensus 107 ~~~~k~~ya~vtY~l~~l~YT~vniPy-~al~~~iT~d~~ER~~l~s~R~~~~~~g----~~l~~~~~~plv~~~g~~~~ 181 (467)
T COG2211 107 SMTGKLIYALVTYMLLGLGYTLVNIPY-GALGPEITQDPQERASLTSWRMVFASLG----GLLVAVLFPPLVKLFGGGDK 181 (467)
T ss_pred ccCcchHHHHHHHHHHHHHHHheeCch-hhcchhhcCCHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhCCCcc
Confidence 34556777788888877766555 4455555 55555555544433333 222223333333322221 1
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchh-HHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhc
Q 014832 194 SLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKD-LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 272 (417)
Q Consensus 194 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (417)
..||+..-.+.+++..+..+..++..+|+..+..+.++ .+++.++.+..++|||++...++...+ .............
T Consensus 182 ~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~-~~~~~~i~~s~~~ 260 (467)
T COG2211 182 ALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLL-LFIAFNIRGSIMV 260 (467)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHH-HHHHHHHHhhhhh
Confidence 23788888888888888888888777776543332222 334445566778899988877774443 4444434444455
Q ss_pred cccCCCCCC---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccc
Q 014832 273 ALSPNDEEI---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISF 349 (417)
Q Consensus 273 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (417)
.|.+...+. ...........+.+++.+...++.+|+|+| +....+.++.+++.+...+.+..
T Consensus 261 yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk--~~~~~~~~~~~i~~~~~~f~~~~------------- 325 (467)
T COG2211 261 YYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK--KLFLIGLLLLAVGYLLLYFTPAG------------- 325 (467)
T ss_pred eeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH--HHHHHHHHHHHHHHHHHHhhcCc-------------
Confidence 555553333 334455556667777799999999999998 88888888888877777766621
Q ss_pred chhHHHHHHHHHHHhhhccchhHHHHHhhcCCccc-------ccccccccccchhHHHHHHH
Q 014832 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA-------RSTIMNFFRIPLNIFVCVVL 404 (417)
Q Consensus 350 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~-------r~~~~g~~~~~~~~~~~~~~ 404 (417)
+.+..++..++.+++.+...+..+++++|..+-++ -|...|......-++..++.
T Consensus 326 ~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~ 387 (467)
T COG2211 326 SVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAG 387 (467)
T ss_pred chHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHH
Confidence 45677777788999999999999999999875432 23345555544444444443
No 113
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.69 E-value=2.5e-14 Score=128.85 Aligned_cols=351 Identities=16% Similarity=0.170 Sum_probs=214.9
Q ss_pred CCcchhHHHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHH
Q 014832 35 FNSFKNNYLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL 110 (417)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 110 (417)
..++||.+++.+.+..+..+++ ++......+.|| +....-|...++.+.+....+++-|+.||+|-|....++..
T Consensus 39 Vy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ 117 (480)
T KOG2563|consen 39 VYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTV 117 (480)
T ss_pred cchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHH
Confidence 3455677777766777766655 344445556677 66677788999999999999999999999999999999999
Q ss_pred HHHHHHH-HhcC-c-----hHH--HHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHH
Q 014832 111 TYILSCI-TKHS-P-----QYK--ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLV 178 (417)
Q Consensus 111 ~~~~~~~-~~~~-~-----~~~--~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g 178 (417)
+..++.. -..+ . .++ ....+..+.+.+.-...... +-+..-| ++|. ........|+.+|
T Consensus 118 ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lP-skiA~~WF~~~qra--------~A~~~~v~~n~LG 188 (480)
T KOG2563|consen 118 LNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLP-SKIAAVWFPPDQRA--------IATVLGVMGNPLG 188 (480)
T ss_pred HHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccc-cHHHHhhCCcchhh--------hhhhHHHhcchHH
Confidence 9999877 3333 2 234 55677777777766554443 2223333 2332 2222222334444
Q ss_pred HHHHhhhhhhhhhhc----cCCCch--hHHHHHHHHHHHHHHHHhhccccCCCCCCchh---HHHHHHhHHHHHhccchh
Q 014832 179 AILSGLFGNLLVDSF----SLGPVA--PFDAAACFLAIGMVIILSSWTENYGDPSESKD---LLTQFRGAAVAIASDEKI 249 (417)
Q Consensus 179 ~~l~~~~~~~~~~~~----~~gw~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 249 (417)
..++-++...+..+. ...|.. .|+..+.++.+.+++..+..+++++.+....+ ......++.++.++++++
T Consensus 189 vavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F 268 (480)
T KOG2563|consen 189 VAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQF 268 (480)
T ss_pred HHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccH
Confidence 444444444443321 114544 34444444443333333233332222111111 112356788999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhccccC-CCC-CCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHH
Q 014832 250 ALLGAIQSLFEGSMYTFVFLWTPALSP-NDE-EIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSL 327 (417)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~ 327 (417)
..+.+.+.+..+..+..... +..-+. +++ +...|.......+++++++.+.|.+.||.+.- ++...+......++.
T Consensus 269 ~il~~~ygi~~g~F~~l~~~-l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f-k~~~~v~~~~~~v~~ 346 (480)
T KOG2563|consen 269 IILAICYGIGLGLFNSLSTL-LNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF-KLTTLVLYLFALVGT 346 (480)
T ss_pred HHHHHHHhhhHHHHHHHHHH-hhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH-HHHHHHHHHHHHHHH
Confidence 98888877655555543332 332222 233 34568888888899999999999999997432 344444444433332
Q ss_pred HHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 328 LLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
..+........ ..+.+.....++|++.....|...-+..|..-|..-++..|+.++..++..++-....
T Consensus 347 ~~l~~~t~~~~-----------~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~ 415 (480)
T KOG2563|consen 347 LMLLTCTLFLG-----------DSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIM 415 (480)
T ss_pred HHHHHhhccCC-----------ceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHH
Confidence 22222221111 3355666777788888888999999999987777778899999998888776665554
Q ss_pred c
Q 014832 408 C 408 (417)
Q Consensus 408 ~ 408 (417)
+
T Consensus 416 ~ 416 (480)
T KOG2563|consen 416 G 416 (480)
T ss_pred H
Confidence 4
No 114
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.67 E-value=2.9e-14 Score=130.61 Aligned_cols=340 Identities=17% Similarity=0.146 Sum_probs=214.4
Q ss_pred hhhhhhHHHHHHhcC----CCcchHHHHHHHHHHHHhhhhcccccccccc-CchHHHHHHHHHHHHHHH-HhcCc--hHH
Q 014832 54 WLQGPYVYYLYSTYG----FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSCI-TKHSP--QYK 125 (417)
Q Consensus 54 ~~~~~~l~~l~~~~g----~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-Grr~~~~~~~~~~~~~~~-~~~~~--~~~ 125 (417)
++..++.-+++.+++ +|+++..-+.+.+.----+...++|+++||+ |+|+++..+.++..++.+ .+..+ +..
T Consensus 39 GmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~ 118 (498)
T COG3104 39 GMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPG 118 (498)
T ss_pred hhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccccc
Confidence 455666667777776 9998887777777755566678899999995 999999999999999999 88874 788
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHH
Q 014832 126 ILMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDA 203 (417)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~ 203 (417)
.+.++-.+.++|.|..-+.. +.++.|. +++.++.+ .++.... |.++|+.++|.+.+++.+.+ ||...|..
T Consensus 119 gl~i~L~~I~iG~Gl~K~Ni-S~llg~ly~~~DprrD~----gFt~fY~-~iNiGsl~~p~i~~~~~~~~--g~~~gF~~ 190 (498)
T COG3104 119 GLYIGLALIIVGTGLFKPNI-SSLLGELYPKDDPRRDG----GFTLFYM-GINIGSLIAPIITGLLAINY--GWHVGFGL 190 (498)
T ss_pred HHHHHHHHHHhccccccccH-HHHHHHhcCCCCcccCC----CccEEEE-EeehHHHHHHHHHHHHHHhh--CHHHHHHH
Confidence 89999999999999998888 6788888 32222222 2222222 25567788888888888888 99999999
Q ss_pred HHHHHHHHHHHHHhhc---cccCCCCCCchhHHHHHH---------------------h----------------HHHHH
Q 014832 204 AACFLAIGMVIILSSW---TENYGDPSESKDLLTQFR---------------------G----------------AAVAI 243 (417)
Q Consensus 204 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---------------------~----------------~~~~~ 243 (417)
.++-..+.++..+... .+...++++.....+... + -..+.
T Consensus 191 aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~ 270 (498)
T COG3104 191 AAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEA 270 (498)
T ss_pred HHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877666665544111 111111111000000000 0 00111
Q ss_pred h------ccc-hhHHH---HHHHHHHHhHHHHH---HHhhhccccCC---CCCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q 014832 244 A------SDE-KIALL---GAIQSLFEGSMYTF---VFLWTPALSPN---DEEIPHGFIFATFMLASMLGSSLASRLMAR 307 (417)
Q Consensus 244 ~------~~~-~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr 307 (417)
+ .+| |.+.. .+...++....... ...|.....++ +.+.++++..+...+.-++..++..++..|
T Consensus 271 ~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~ 350 (498)
T COG3104 271 FRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTK 350 (498)
T ss_pred hccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhH
Confidence 1 112 22221 11111222111111 11122222222 244667888888888888888888887777
Q ss_pred cCCC---cc--chHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCc
Q 014832 308 SPPR---VE--SYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPE 382 (417)
Q Consensus 308 ~g~~---~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~ 382 (417)
.+++ ++ ...-++..++..+.+++........ .++...+.++.+...++.+++.-...|...+++.++.|+
T Consensus 351 l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~-----~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~ 425 (498)
T COG3104 351 LGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFG-----GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPP 425 (498)
T ss_pred hhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhc-----CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChH
Confidence 5443 22 2334455555555555444421111 113334778889999999999999999999999999999
Q ss_pred ccccccccccccchhHHHHHHHHH
Q 014832 383 EARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 383 ~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
...+..+++.-.....+..++...
T Consensus 426 ~~~s~~ma~wfLt~a~~~~l~g~v 449 (498)
T COG3104 426 ALKSFIMAMWFLTVAAGQTLGGQV 449 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcee
Confidence 999999998766655555555443
No 115
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.67 E-value=9.1e-15 Score=132.21 Aligned_cols=260 Identities=12% Similarity=0.019 Sum_probs=160.3
Q ss_pred hcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc-----
Q 014832 119 KHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF----- 193 (417)
Q Consensus 119 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~----- 193 (417)
+...+++.++++-++.|.|.+...+.+ ..++++..++.. .....+..... +++|..++|.+++.+....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~-n~~v~~~~~~~~----~~~~l~~~~~~-~~~G~~~gP~i~~~~i~~~~~~~~ 78 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAA-NPYVSILGPIET----AASRLALTQAF-NKLGTTVAPLFGGSLILSGAGDLS 78 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhH-HHHHHHHCCcch----HHHHHHHHHHH-hhhHHHHHHHHHHHHHhcCCcchh
Confidence 455789999999999999999999999 568887721111 12234444444 6666677777777655211
Q ss_pred ---------cCCCchhHHHHHHHHHHHHHHH-HhhccccCCCCCCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHH
Q 014832 194 ---------SLGPVAPFDAAACFLAIGMVII-LSSWTENYGDPSESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (417)
Q Consensus 194 ---------~~gw~~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (417)
..+|+++|++.+.+..+..++. ....||.+++++++.++++ ....++.+|+|..+...+..++ ....
T Consensus 79 ~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~f~-yvg~ 155 (310)
T TIGR01272 79 MQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSSGD--TTQKTSAFQFTHLVLGALGIFV-YVGA 155 (310)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccccccccccc--ccchhhHHhhHHHHHHHHHHHH-HHHH
Confidence 0279999997665544444333 3334543332221111111 1112345666776665444444 3333
Q ss_pred HHHHHhhhccccCCC--CCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccC
Q 014832 264 YTFVFLWTPALSPND--EEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVA 338 (417)
Q Consensus 264 ~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 338 (417)
......|.+.|+++. .+.+ .+...+.+..+.++|+++.+++.||+++| |.+..+..+..+...+....+
T Consensus 156 e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~--~~l~~~~~l~~~~~~l~~~~~---- 229 (310)
T TIGR01272 156 EVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG--RYLAFNAFLAVLLSIGAALTH---- 229 (310)
T ss_pred HHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHcC----
Confidence 334556899999752 3443 36666788889999999999999999877 776666655555443332222
Q ss_pred CCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 339 PSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+ ........+.+++.+..+|...+...+..|++ .+++.++.. ...+|..+.+...
T Consensus 230 -----------~-~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~~-~~~~Gg~i~P~l~ 284 (310)
T TIGR01272 230 -----------G-YVAMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGILC-LAIVGGAIVPLLQ 284 (310)
T ss_pred -----------C-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHHH-HHHhcchHHHHHH
Confidence 1 22334566788999999999999999988865 455666643 3445666655543
No 116
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.64 E-value=2.2e-13 Score=122.21 Aligned_cols=316 Identities=12% Similarity=0.090 Sum_probs=204.2
Q ss_pred chHHHHHHHHHHHHhhhhccccccccccCchHHHHH-HHHHHHHHHH-HhcCch---HHHHHHHHHHHHHHhhhhhhhHH
Q 014832 72 GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT-YCLTYILSCI-TKHSPQ---YKILMIGRILGGIATSLLFSAFE 146 (417)
Q Consensus 72 ~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~-~~~~~~~~~~-~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~ 146 (417)
+..|...++..+..++.+|+.|.++|+.|+||.... ...+..++.. ..++++ ++..++...+..++.......-
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy- 136 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY- 136 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh-
Confidence 334777888889999999999999999997665544 4444455555 555544 4555666778888877776666
Q ss_pred HHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH--Hhhhhh----hh-h-----hhccCCCchhHHHHHHHHHHHHHH
Q 014832 147 SWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAIL--SGLFGN----LL-V-----DSFSLGPVAPFDAAACFLAIGMVI 214 (417)
Q Consensus 147 ~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l--~~~~~~----~~-~-----~~~~~gw~~~f~~~~~~~~~~~~~ 214 (417)
.+++.+..++.......+...+.+..- ..+--++ +..+.+ .. . ......-|..+.+.++..++..+.
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylg-s~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLG-SVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhHhhhhcCccccCccccccccccccc-chHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 557776622211111111111111111 1000000 001111 00 0 001124677888888776666665
Q ss_pred HHhhccccCCCC-CCc---hhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCChh---HHH
Q 014832 215 ILSSWTENYGDP-SES---KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHG---FIF 287 (417)
Q Consensus 215 ~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 287 (417)
.+...++..... +++ .+..++.++.++++.+++.+....+..++.+-....... ....|....++++.. ...
T Consensus 216 m~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~-~~~~fg~~~~gls~~~lll~g 294 (438)
T COG2270 216 MILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILA-MGGVFGAADLGLSSTELLLIG 294 (438)
T ss_pred HHhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHH-HHHHHHHHHcCccHHHHHHHH
Confidence 554555443221 111 123455667888888888887777777776666554333 477777765666553 333
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014832 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (417)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (417)
....+..++|+++.|++.||+|.| +.+..+.++..+.++...+.. .....++.-.+.|...|.
T Consensus 295 ~~~~vvA~lg~ii~g~Ld~rfg~k--~vl~~~lvi~~~~~~~~~~~~---------------~~~~f~i~gll~g~s~G~ 357 (438)
T COG2270 295 IALSVVAALGAIIAGFLDERFGSK--PVLMIGLVILSIAALYLIFLE---------------GELDFWILGLLVGTSLGG 357 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCc--eeehHHHHHHHHHHHHHHHcc---------------ccHHHHHHHHHHHHhcch
Confidence 566678899999999999999988 888888777777666665555 335566677888999999
Q ss_pred cchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 368 FWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
.+...-++..+.+|+++-++.+|++++.......+|+..+
T Consensus 358 ~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv 397 (438)
T COG2270 358 AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLV 397 (438)
T ss_pred HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999998888888777653
No 117
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.59 E-value=2.2e-13 Score=128.90 Aligned_cols=165 Identities=13% Similarity=0.123 Sum_probs=121.9
Q ss_pred hhhHHHHHHhcCCCc--------chHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC-c---h
Q 014832 57 GPYVYYLYSTYGFGK--------GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS-P---Q 123 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~--------~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~-~---~ 123 (417)
..+.|...++.|.++ ++.+...++..+...++.++.|+++||+|||+++..+.++.+++.. .... + +
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~ 307 (418)
T TIGR00889 228 NIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFG 307 (418)
T ss_pred HHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhh
Confidence 355555556666553 5668899999999999999999999999999999999998888766 5543 2 2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcc----CCCch
Q 014832 124 YKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS----LGPVA 199 (417)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~----~gw~~ 199 (417)
++.+++.+++.|++.+...+.. ..++.|. .+.+.+...++........+|..++|.+++.+.++.. .||+.
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~-~~~i~~~----~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~ 382 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISG-SVFVEKE----VPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQT 382 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHH----CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHH
Confidence 4667788999999998887776 6678887 2233334455555433366777888888888877631 27999
Q ss_pred hHHHHHHHHHHHHHHHHhhccccCCCC
Q 014832 200 PFDAAACFLAIGMVIILSSWTENYGDP 226 (417)
Q Consensus 200 ~f~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (417)
.|.+.++..++..++..+.++|+++..
T Consensus 383 ~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 383 MWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 999998888887777777777765543
No 118
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.58 E-value=1e-14 Score=122.95 Aligned_cols=321 Identities=12% Similarity=0.051 Sum_probs=182.4
Q ss_pred HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccc-cCchHHHHHHHHHHHHHHH-Hhc---CchHHHHHHHHHHHHH
Q 014832 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSCI-TKH---SPQYKILMIGRILGGI 136 (417)
Q Consensus 62 ~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~~~~~~~~~~~~-~~~---~~~~~~l~~~r~l~G~ 136 (417)
+...|.+++.++..++.+.+.....+...++|++.|| +|.|..-++-++...++.+ ++. .+.+|.+..+|++.|+
T Consensus 69 ~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGI 148 (459)
T KOG4686|consen 69 DFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGI 148 (459)
T ss_pred hhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeecc
Confidence 4456778888899999999999999999999999997 5777665555555566655 444 5689999999999999
Q ss_pred HhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHH----HHHHHHH
Q 014832 137 ATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFD----AAACFLA 209 (417)
Q Consensus 137 ~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~----~~~~~~~ 209 (417)
|.-..-.+. ..+...| ++-+...+.+.+..-++..+-. .+.|.+....-..++.--..... +....+.
T Consensus 149 GgESlAVaQ-N~yav~wFKGKELn~vfGlqlSvAR~GstvNf----~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~ 223 (459)
T KOG4686|consen 149 GGESLAVAQ-NKYAVYWFKGKELNFVFGLQLSVARLGSTVNF----LLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCK 223 (459)
T ss_pred Cchhhhhhh-cceeEEEecCccccchhhHHHHHHHhhceeee----eecHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 966654443 5666655 3334433333333222222211 12222222211111000011111 1111111
Q ss_pred HHHHHHH-hhccccCCCC-CCchhHHHHHHhHHHHHhc-cchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCC---h
Q 014832 210 IGMVIIL-SSWTENYGDP-SESKDLLTQFRGAAVAIAS-DEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIP---H 283 (417)
Q Consensus 210 ~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 283 (417)
..++... ..+.+++.+. -+.++..........+... .+++|.+.....+.....+-+.. ..|.++++.++.+ .
T Consensus 224 ~slical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~-lg~~fF~~rfGlS~~~a 302 (459)
T KOG4686|consen 224 QSLICALSLGLSDDRAERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFIT-LGPMFFQKRFGLSAVSA 302 (459)
T ss_pred HHHHHHHHhhhhhhHHHHHHhhhcCcccCCcccccccccCccHHHHHHHHHHHHHHHHHHhh-hhHHHHHHhhCCChhhc
Confidence 1111111 1122211100 0000000000001111111 26677776666555555554333 5788888855554 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHH-HHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHH
Q 014832 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSV-SLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (417)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (417)
+.+.+.....+.+..++.|.++||.|++ .....+..+..+ +-..+.+.. +-....+.+.|
T Consensus 303 ~~i~s~vy~Isav~spvfg~i~Dk~G~n--~~wv~~a~~~tl~~H~~l~Ft~-----------------lsPy~~m~~lG 363 (459)
T KOG4686|consen 303 GNILSTVYGISAVLSPVFGAISDKYGFN--LWWVASACILTLLGHSGLFFTF-----------------LSPYTSMTFLG 363 (459)
T ss_pred cchhhhhhhhhhhhhhhHHHhHhhhcce--ehhHHHHHHHHHHHhhhHHhhh-----------------ccHHHHHHHHh
Confidence 5566655566778889999999999987 333333332222 222222222 33456777888
Q ss_pred HhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 363 ACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
..+.+.--..+..++.++|+++.|+++|..+..+|++-.+.....
T Consensus 364 LsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iia 408 (459)
T KOG4686|consen 364 LSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIA 408 (459)
T ss_pred hhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhh
Confidence 888876677888999999999999999999999999877766543
No 119
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.52 E-value=2.3e-12 Score=119.49 Aligned_cols=364 Identities=16% Similarity=0.092 Sum_probs=194.1
Q ss_pred CCcchhHHHHHHHHHHHHhhhh-----hhhHHHHHH-hcCCCcchHHHHHHHHHHHHhhhhccccccccccCc-hHHHHH
Q 014832 35 FNSFKNNYLLVYSLMMAGDWLQ-----GPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRACVT 107 (417)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Gr-r~~~~~ 107 (417)
.++.+|+.+.+..+..+....+ ...-|++.+ |.+.+.+..|++.++..++.+++++..|++..|.+. |+.++.
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~ 107 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIV 107 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHH
Confidence 4456676666666555555444 122223333 578888999999999999999999999999999996 888888
Q ss_pred HHHHHHHHHH-H-hcC---c-hHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHH
Q 014832 108 YCLTYILSCI-T-KHS---P-QYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLV 178 (417)
Q Consensus 108 ~~~~~~~~~~-~-~~~---~-~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g 178 (417)
+.++..++.+ . ... + .-+.++++|++.|+|.+.. ... -.++++. ++|.+... ..+.+..+|..+|
T Consensus 108 s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~l-R~Y~a~~s~~~dR~rA~a----~~~~~~vlg~ilG 181 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVL-RAYIADASTVEDRPRAFA----ATSGGFVLGIILG 181 (488)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHH-HHHHHhccCccchHHHHH----HhhhHHHHHHHHh
Confidence 8888888877 5 332 3 5688999999999998876 444 4588886 44444333 3333445555566
Q ss_pred HHHHhhhhhhhhhhcc-------CCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCchhHHH-HHH---hHHHHHhccc
Q 014832 179 AILSGLFGNLLVDSFS-------LGPVAPFDAAACFLAIGMVIILSSWTENYGDPSESKDLLT-QFR---GAAVAIASDE 247 (417)
Q Consensus 179 ~~l~~~~~~~~~~~~~-------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~ 247 (417)
+.+++.+++...+.+. .-+..+-++.+++.++..++.....+|.+.+.++++++.+ +.+ +..+...-++
T Consensus 182 p~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 261 (488)
T KOG2325|consen 182 PTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEEKSDIEKVKKPKLDW 261 (488)
T ss_pred HHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhhccchhhhccCChhH
Confidence 6666555554422110 0134567788888888777777677776544322211111 011 1111111112
Q ss_pred hhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCC--Ch-----hHHHHHHHHHHHHHHHHHHHHHhhcCC-CccchHHHH
Q 014832 248 KIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI--PH-----GFIFATFMLASMLGSSLASRLMARSPP-RVESYMQIV 319 (417)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~l~~~ 319 (417)
.....++...+.....+....+-.+.+....++. +. +...+..++....-.+ ....-|+++ -.++.+..+
T Consensus 262 ~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l--~~~f~~l~~i~~r~~~~~g 339 (488)
T KOG2325|consen 262 VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLL--LYIFTRLGKIDKRRIILLG 339 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHH--HHHHHHhhhhccceeeeeh
Confidence 2222222222222222222222223222222222 11 2222322222222222 222223222 111444444
Q ss_pred HHHHHHHHHHHHHHh-hccCCC---C-------CCCCCc-----ccchhHHHH-HHHHHHHhhhccchhHHHHHhhcCCc
Q 014832 320 FVVSSVSLLLPIVTS-FLVAPS---N-------VKSGGI-----SFSGSLQLL-GFCTFEACVGIFWPSIMKMRSQYIPE 382 (417)
Q Consensus 320 ~~~~~~~~~~~~~~~-~~~~~~---~-------~~~~~~-----~~~~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~p~ 382 (417)
+.....+..+..+.. ....+- + .+..++ ..+.+..+. ..+++|.+.........+.-+|...+
T Consensus 340 ~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp 419 (488)
T KOG2325|consen 340 FLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGP 419 (488)
T ss_pred HHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCC
Confidence 343333333322211 111010 1 000000 111222222 23445555555667788999999999
Q ss_pred ccccccccccccchhHHHHHHHHH
Q 014832 383 EARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 383 ~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
+.+++..++..+....+-.++...
T Consensus 420 ~~q~~~qg~~~~~~s~~~~~~~~~ 443 (488)
T KOG2325|consen 420 RDQGTMQGVFSISGSIARVVGPIF 443 (488)
T ss_pred ccccceeEEEEeccchhhhhhHHH
Confidence 999999999999888877777554
No 120
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.51 E-value=5.5e-11 Score=107.21 Aligned_cols=313 Identities=13% Similarity=0.088 Sum_probs=191.2
Q ss_pred HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccC-----chHHHHHH-HHHHHHHHH-Hhc-----Cc-------
Q 014832 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-----RKRACVTY-CLTYILSCI-TKH-----SP------- 122 (417)
Q Consensus 62 ~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G-----rr~~~~~~-~~~~~~~~~-~~~-----~~------- 122 (417)
.+..|++++..-.+.+.+..++... ..+.+|+.+|+.+ ||..+++. .+....+.. ..+ +.
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 3568899999999999888887755 5999999999999 88776654 444333322 222 22
Q ss_pred hH--H--HHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccC
Q 014832 123 QY--K--ILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSL 195 (417)
Q Consensus 123 ~~--~--~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~ 195 (417)
+. + ...+.-.+.|+|.+...+.. .++++|. ++|++ ..++.+.. ..+|.+++..+.+.+.+.+
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~-lALl~D~~~e~~R~~-------~v~ivw~M-li~G~iv~ai~~g~lL~~~-- 152 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSF-LALLADLAPEERRPR-------VVAIVWVM-LIVGIIVSAIVFGRLLDPF-- 152 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHH-HHHHHhcCCHhhhhh-------hHHHHHHH-HHHHHHHHHHHHHHHcccc--
Confidence 22 2 23445577788877776666 6788888 44443 23333333 3444455566666665554
Q ss_pred CC-ch--hHHHHHHHH-HHHHHHHHhhccccCCCC-C-CchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHh
Q 014832 196 GP-VA--PFDAAACFL-AIGMVIILSSWTENYGDP-S-ESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFL 269 (417)
Q Consensus 196 gw-~~--~f~~~~~~~-~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (417)
+- |. .+...+++. .+..+..+ . .|++.++ + +++++....++.++++.++|+...+.....+... .+.....
T Consensus 153 s~~rL~~v~~~~a~i~~~l~~ia~w-g-~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~-a~~~QD~ 229 (403)
T PF03209_consen 153 SPERLIQVIQGVALIALLLNLIALW-G-QEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTL-AFFMQDV 229 (403)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH-h-cccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHH-HHHhhHH
Confidence 32 21 222222222 22222222 2 2222211 1 2233344456778888888776655554444333 3333444
Q ss_pred hhccccCCCCCCChh---HHHHHHHHHHHHHHHHHHHHHhh-cCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 014832 270 WTPALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (417)
Q Consensus 270 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (417)
.+-.|-.+.++.+.+ .+....+.+.++|-...+++..| .+++ +...+++..+..++..........
T Consensus 230 iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~--~~a~~G~~~~~~~f~lii~a~~~~-------- 299 (403)
T PF03209_consen 230 ILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK--RTAALGCLLGALAFALIILAGPLG-------- 299 (403)
T ss_pred HcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch--HHHHHHHHHHHHHHHHHHHHHhcc--------
Confidence 556666665666543 44456667888888888887774 4433 666677777777766655554322
Q ss_pred CcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHH
Q 014832 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVV 403 (417)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~ 403 (417)
+.+.+....+++|++.|.......+...+..++++.|..+|.....+.+...++
T Consensus 300 ----~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg 353 (403)
T PF03209_consen 300 ----SPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLG 353 (403)
T ss_pred ----cchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 447888899999999999999999999999999999999988777666544333
No 121
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.48 E-value=7.3e-12 Score=117.82 Aligned_cols=153 Identities=12% Similarity=0.060 Sum_probs=110.8
Q ss_pred hhhHHH-HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHH
Q 014832 57 GPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILG 134 (417)
Q Consensus 57 ~~~l~~-l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~ 134 (417)
....|. +.+++|.++.+.+++.+...+...++.++.|+++||+|||+.+..+.....+... ....++.+.+++.+++.
T Consensus 236 ~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 315 (393)
T PRK15011 236 IINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLN 315 (393)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 345664 4467899999999988887788888999999999999999988877666665555 65677788888889988
Q ss_pred HHHhhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHH
Q 014832 135 GIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~ 212 (417)
+++.+...+.. ..+..|. ++++. ..+..... ..+|..+++.+++.+.+.. ||+..|.+.++..++..
T Consensus 316 ~~~~g~~~~~~-~~~~~~~~p~~~g~-------~~~~~~~~-~~lg~~~g~~l~G~i~~~~--g~~~~~~~~~~~~~~~~ 384 (393)
T PRK15011 316 AIYIGILGGIG-MLYFQDLMPGQAGS-------ATTLYTNT-SRVGWIIAGSLAGIVAEIW--NYHAVFWFALVMIIATL 384 (393)
T ss_pred HHHHHHHHHHH-HHHHHHhCCCCcch-------HHHHHHHH-HHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHH
Confidence 88877766655 4566666 33332 22222222 4556677777777777777 99999998888777766
Q ss_pred HHHHhhccc
Q 014832 213 VIILSSWTE 221 (417)
Q Consensus 213 ~~~~~~~~~ 221 (417)
+..+ ..||
T Consensus 385 ~~~~-~~~~ 392 (393)
T PRK15011 385 FCLL-RIKD 392 (393)
T ss_pred HHHH-hhcC
Confidence 6655 4443
No 122
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.45 E-value=2.1e-12 Score=122.66 Aligned_cols=149 Identities=13% Similarity=0.067 Sum_probs=113.2
Q ss_pred HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhh
Q 014832 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFS 143 (417)
Q Consensus 65 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (417)
++.+.+..+.|.+.++..++..++.++.|++.||+|||+.+..+.++.+++.+ ..++++.+.+...+++.|++.+...+
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 34466777889999999999999999999999999999999999999888888 88899999999999999998877666
Q ss_pred hHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccc
Q 014832 144 AFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTE 221 (417)
Q Consensus 144 ~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 221 (417)
.. ..++.|. .+|.+ ....+.+...+..+|..+++.+.+++.+.. ||+..|.+.+++.++..++.....++
T Consensus 335 ~~-~~~~~~~~~~~~~-----a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~--G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 335 GV-FKYITLNFDVRLS-----ATIYLVGFQFAKQLGAVFLSTLAGNLYDSI--GFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HH-HHHHHHHcCccce-----eeeeeehHHHHHHHHHHHHHHHHHHHHHhh--CchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 55 4566665 22211 112222223335677788888889998888 99999999888776666555534433
No 123
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.43 E-value=2e-11 Score=115.21 Aligned_cols=150 Identities=19% Similarity=0.224 Sum_probs=109.0
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
..++|...++.|.+ +.++..+...++..++.++.|++.||+||||.+..+..+.+++.+ ....++.+.+++.+++.|
T Consensus 236 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 313 (399)
T PRK05122 236 ATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTG 313 (399)
T ss_pred HHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 45566555666663 456666777888889999999999999999999998888888888 778888888888999999
Q ss_pred HHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~ 215 (417)
++.+...+.. .....|. .+.+.+....+..... ..+|..+++.+.+.+.+.. ||+..|++.+...+++.+..
T Consensus 314 ~~~~~~~~~~-~~~~~~~----~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~ 385 (399)
T PRK05122 314 FGFSLVFPAL-GVEAVKR----VPPQNRGAALGAYSVF-LDLSLGITGPLAGLVASWF--GYPSIFLAAALAALLGLALT 385 (399)
T ss_pred HhHHHHHHHH-HHHHHHh----CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHH
Confidence 9998877766 4455554 1122222333333333 4555566666777777777 99999999888777776665
Q ss_pred H
Q 014832 216 L 216 (417)
Q Consensus 216 ~ 216 (417)
.
T Consensus 386 ~ 386 (399)
T PRK05122 386 W 386 (399)
T ss_pred H
Confidence 5
No 124
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.43 E-value=2.4e-11 Score=113.65 Aligned_cols=150 Identities=14% Similarity=0.141 Sum_probs=112.4
Q ss_pred hhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 58 PYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 58 ~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
...| .+.+++|.++.+.+++.+.......++.++.|++.||+|||+.+..+.+...+... ....++.+.+.+.+++.|
T Consensus 220 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 299 (375)
T TIGR00899 220 INMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNA 299 (375)
T ss_pred hhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445 34478899999999988887777788889999999999999999888777666666 666678888888899999
Q ss_pred HHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~ 215 (417)
++.+...+.. ..+..|..++. .....+..... ..+|..+++.+.+.+.+.. ||+..|++.++..+++.+..
T Consensus 300 ~~~g~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~-~~~g~~~g~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 300 IFIGILAGIG-MLYFQDLMPGR-----AGAATTLYTNT-GRVGWIIAGSVGGILAERW--SYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHHHHH-HHHHHHhCcch-----hhHHHHHHHHH-HHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHHHHHHHH
Confidence 9988877766 55666662211 12244444444 4467788888888888877 99999999888877776665
Q ss_pred H
Q 014832 216 L 216 (417)
Q Consensus 216 ~ 216 (417)
.
T Consensus 371 ~ 371 (375)
T TIGR00899 371 L 371 (375)
T ss_pred h
Confidence 4
No 125
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.43 E-value=3.7e-11 Score=112.58 Aligned_cols=155 Identities=11% Similarity=0.093 Sum_probs=123.2
Q ss_pred HhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHH
Q 014832 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIG 130 (417)
Q Consensus 52 ~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 130 (417)
.......+.|...+|+|.++.++|.+.+...++..+..++.|++.||+|+|+.+.++.+...+... .+++++.+.++..
T Consensus 220 ~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (382)
T TIGR00902 220 AHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLL 299 (382)
T ss_pred HHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHH
Confidence 333334566666678999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHH
Q 014832 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
+++.|+..+...+.. ..++.+. ++ +.+....+.....+.++|..+++.+++.+.+++ |+ ..|...+.+.++
T Consensus 300 q~l~g~~~~~~~~~~-~~~i~~~-~~----~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~--g~-~~~~~~~~~~~~ 370 (382)
T TIGR00902 300 QILHCGTFAVCHLAA-MRYIAAQ-PG----SEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL--GA-GTFVFMAIIAAA 370 (382)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhC-CH----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cH-HHHHHHHHHHHH
Confidence 999999999998887 5677654 22 222333444444456788888899999998887 76 667777777766
Q ss_pred HHHHH
Q 014832 211 GMVII 215 (417)
Q Consensus 211 ~~~~~ 215 (417)
+.++.
T Consensus 371 ~~~~~ 375 (382)
T TIGR00902 371 AFFLI 375 (382)
T ss_pred HHHHH
Confidence 65443
No 126
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.41 E-value=1.6e-10 Score=108.70 Aligned_cols=295 Identities=15% Similarity=0.090 Sum_probs=184.9
Q ss_pred HHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhh--hhhhHHHHHHhhhcccch
Q 014832 82 FGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSL--LFSAFESWLVAEHNKRGF 158 (417)
Q Consensus 82 ~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~--~~~~~~~~~i~~~~~r~~ 158 (417)
.+...+.++..|.++||+|||..+........+..+ ..+.. +|.++ +.++..+. ..... .++++|..+..
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~-~a~vadis~~~- 144 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVG-FAYVADISSEE- 144 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhh-hhheeeccchh-
Confidence 577888899999999999999999999888888777 55544 44433 33333222 22233 44677761111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCCCCCc---------
Q 014832 159 EQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGDPSES--------- 229 (417)
Q Consensus 159 ~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 229 (417)
.+...+++.... ...+..++|.+++.+.+.. |.-.+|.+..+...+..+......||+..+++++
T Consensus 145 ---~R~~~~gll~~~-~~~~~~~~p~~~~~~~~~~--~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~ 218 (463)
T KOG2816|consen 145 ---ERSSSIGLLSGT-FGAGLVIGPALGGYLVKFL--GIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTP 218 (463)
T ss_pred ---HHHHHHHHHHHH-HHHHHhHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCC
Confidence 122233333332 4555577788888887777 8899999999998888888887888876554443
Q ss_pred -hhHHHHHHhHHHHHh---ccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCCh---hHHHHHHHHHHHHHHHHHH
Q 014832 230 -KDLLTQFRGAAVAIA---SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLAS 302 (417)
Q Consensus 230 -~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g 302 (417)
+.......+.++... ++|..+.+.+...+..........-..+.|++..++++. +...+.......++..+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~ 298 (463)
T KOG2816|consen 219 GSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLL 298 (463)
T ss_pred CcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111222222222 224444444443333332222222124566666565554 4455556666667776665
Q ss_pred -HHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCC
Q 014832 303 -RLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIP 381 (417)
Q Consensus 303 -~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p 381 (417)
.+...++.+ +....+...-.+......+.. +.|..+.... .........|...+......+
T Consensus 299 ~~l~~~l~~~--~~i~lGl~~~~~~~~~~af~~---------------~~w~~~~~~v-~~~~~~~~~pa~~s~~s~~v~ 360 (463)
T KOG2816|consen 299 PLLSSILGEK--RLISLGLLSEFLQLLLFAFAT---------------ETWMMFAAGV-VVALAGIVFPAIRAFASILVS 360 (463)
T ss_pred HHHHHHHhhh--hHhhHHHHHHHHHHHHHHHhc---------------cchhhhHHHH-HHHhhcchhHHHHhHHHhhcc
Confidence 677777777 666666666666666666655 4455444444 444556668999999999999
Q ss_pred cccccccccccccchhHHHHHHHHHh
Q 014832 382 EEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 382 ~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
++++|+++++.....++...++....
T Consensus 361 ~~e~g~v~~~is~i~~l~~~~~~~~~ 386 (463)
T KOG2816|consen 361 PEEQGKVFGIISGIEGLSGVVSPALY 386 (463)
T ss_pred cccccchhhHHHHHHHHhhhhhHHHH
Confidence 99999999998888888777666543
No 127
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.40 E-value=2e-11 Score=113.96 Aligned_cols=147 Identities=14% Similarity=0.088 Sum_probs=109.5
Q ss_pred hhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchH--HHHHHHHHHH
Q 014832 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQY--KILMIGRILG 134 (417)
Q Consensus 58 ~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~--~~l~~~r~l~ 134 (417)
...++..+++|.++.+.+.+.+...++..+++++.|++.||+|||+.+..+.....++.+ ..+.++. ..+....++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALV 305 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 444555688999998999999999999999999999999999999999999888888877 7666643 3344567788
Q ss_pred HHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHH
Q 014832 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~ 212 (417)
|++.+...+.. +.++.|. ...+.+....+..... ..+|..++|.+.+.+.+.. ||+..|.+.+++.+++.
T Consensus 306 g~~~g~~~~~~-~~~~~~~----~~~~~~~~~~g~~~~~-~~~g~~~~~~~~g~l~~~~--g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 306 FFTWGGTISLF-PSLVSDI----FGPANSAANYGFLYTA-KAVAGIFGGLIASHALTEI--GFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHhccchhcc-HHHHHHH----hhhhhhhhHhHHHHHH-HHHHHHHHHHHHHHHHhhh--chhhHHHHHHHHHHHhc
Confidence 88877766655 5577776 1122222344444444 5677788888888888877 99999998887766543
No 128
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.39 E-value=8.3e-11 Score=111.66 Aligned_cols=161 Identities=17% Similarity=0.013 Sum_probs=117.2
Q ss_pred hhhHHHHHHh-cCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHH
Q 014832 57 GPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILG 134 (417)
Q Consensus 57 ~~~l~~l~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~ 134 (417)
....|.+.++ +|.++.+.|++.+...++..++.++.|++.||.++|+.+..+.+..+++.+ ..+.++.+...+..++.
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALF 322 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 3456655555 899999999999999999999999999999998888888888888888888 88888888888888999
Q ss_pred HHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHH
Q 014832 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~ 214 (417)
|++.+...+.. .+++.|. .+.+.+....+..... ..+|..+++.+.+.+.+.. |++..+...+...++...+
T Consensus 323 g~~~~~~~~~~-~~~~~~~----~p~~~~g~~~g~~~~~-~~~g~~~g~~l~G~l~~~~--g~~~~~~~~~~~~~~~~~~ 394 (417)
T PRK10489 323 GYLSAISSLLQ-YTLLQTQ----TPDEMLGRINGLWTAQ-NVTGDAIGAALLGGLGAMM--TPVASASASGFGLLIIGVL 394 (417)
T ss_pred HHHHHHHHHHH-HHHHHhh----CCHHHHHHHHHHHHHH-HhhhHhHHHHHHHHHHHHh--chhhHHHHHHHHHHHHHHH
Confidence 99887765555 4566665 1222222234443333 4556677777777777777 8888888877666555555
Q ss_pred HHhhccccCCC
Q 014832 215 ILSSWTENYGD 225 (417)
Q Consensus 215 ~~~~~~~~~~~ 225 (417)
.....++.++.
T Consensus 395 ~~~~~~~~~~~ 405 (417)
T PRK10489 395 LLLVLGELRRF 405 (417)
T ss_pred HHHhccccccc
Confidence 54455665543
No 129
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.38 E-value=1.3e-10 Score=108.85 Aligned_cols=149 Identities=17% Similarity=0.146 Sum_probs=108.3
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
..++|...++.|.++++.|.+.+...++..+++++.|++.||+|+|+++..+.....++.. .. + ........++.|
T Consensus 220 ~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g 296 (381)
T PRK03633 220 YGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILG 296 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHH
Confidence 4567766777899999999999999999999999999999999999999888888777666 43 2 233345667778
Q ss_pred HHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~ 215 (417)
++.....|.. ...+.|..+++ ......+.. ..+..+|..++|.+++.+.+++ +|++.|.+.+...++.....
T Consensus 297 ~~~~~~~p~~-~~~~~~~~~~~----~~~~~~~~~-~~~~~lG~~igp~~~G~l~~~~--g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 297 AAGFTLYPVA-MAWACEKVEHH----ELVAMNQAL-LLSYTVGSLLGPSFTAMLMQNY--SDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHhHHHHH-HHHHHccCCHH----HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHHHH
Confidence 7766666766 45566652111 111122222 2336777888899999998888 99999999888777665554
Q ss_pred H
Q 014832 216 L 216 (417)
Q Consensus 216 ~ 216 (417)
+
T Consensus 369 ~ 369 (381)
T PRK03633 369 L 369 (381)
T ss_pred H
Confidence 4
No 130
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.38 E-value=4.1e-11 Score=113.40 Aligned_cols=154 Identities=18% Similarity=0.138 Sum_probs=109.9
Q ss_pred hhhhHHHHHHhcCCCcch----HHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHH
Q 014832 56 QGPYVYYLYSTYGFGKGE----IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIG 130 (417)
Q Consensus 56 ~~~~l~~l~~~~g~s~~~----~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 130 (417)
..+..|...++.+.+..+ .+.+.++..++..++.+..|+++||+|||+.+..+.....++.+ ..+.++.+.+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGIL 317 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 345555554544333332 35566667788889999999999999999999999888888777 7777888888899
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHH
Q 014832 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~ 207 (417)
+++.|++.+...+.. ..++.+. +++++..+ ..... ..+|..++|.+++.+.+.. ||+..|++.+++
T Consensus 318 ~~~~g~~~~~~~~~~-~~~~~~~~~~~~~g~~~~-------~~~~~-~~~g~~~gp~~~G~l~~~~--g~~~~f~~~~~~ 386 (408)
T PRK09874 318 RFLLGAADGALLPAV-QTLLVYNSSNQIAGRIFS-------YNQSF-RDIGNVTGPLMGAAISANY--GFRAVFLVTAGV 386 (408)
T ss_pred HHHHHhhhHhhHHHH-HHHHHHhCCcccceeeeh-------HHHHH-HHHHHHhhHHHHHHHHhhc--chhHHHHHHHHH
Confidence 999999999887776 4455554 23343222 22222 4455567777777777777 999999999988
Q ss_pred HHHHHHHHHhhcc
Q 014832 208 LAIGMVIILSSWT 220 (417)
Q Consensus 208 ~~~~~~~~~~~~~ 220 (417)
.++..+..++..+
T Consensus 387 ~l~~~~~~~~~~~ 399 (408)
T PRK09874 387 VLFNAVYSWNSLR 399 (408)
T ss_pred HHHHHHHHHHHHH
Confidence 8877776654333
No 131
>PRK03699 putative transporter; Provisional
Probab=99.36 E-value=6.6e-11 Score=111.40 Aligned_cols=151 Identities=13% Similarity=0.083 Sum_probs=112.5
Q ss_pred hhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHH
Q 014832 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILG 134 (417)
Q Consensus 57 ~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~ 134 (417)
..++|.+. +++|.|+.+.+.+.+...++..++.+..|+++||++||+.+........+... ....++.+.+.+..++.
T Consensus 225 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (394)
T PRK03699 225 ISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGL 304 (394)
T ss_pred HHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 45677555 67899999999999999999999999999999999999999888777777666 66777777777778888
Q ss_pred HHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHH
Q 014832 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~ 214 (417)
|++.+..++.. .....|..++.. .. ..+..... ..+|..++|.+.+.+.+.. |++..++..++..+++...
T Consensus 305 G~~~~~~~~~~-~~~~~~~~~~~~-~~----~~g~~~~~-~~~g~~i~p~~~G~l~~~~--g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 305 GFFSSAIYTTI-ITLGSQQTKVAS-PK----LVNFILTC-GTIGTMLTFVVTSPIVAHF--GLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHHHHHHHHHH-HHHHHHHccCCC-HH----HHHHHHHh-hhHHHHHHHHHHHHHHHHh--CchhhhhhhHHHHHHHHHH
Confidence 98877776765 445555411111 11 22333333 5577888898888888888 9999998888776666554
Q ss_pred HH
Q 014832 215 IL 216 (417)
Q Consensus 215 ~~ 216 (417)
..
T Consensus 376 ~~ 377 (394)
T PRK03699 376 CI 377 (394)
T ss_pred HH
Confidence 43
No 132
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.36 E-value=6.6e-11 Score=114.59 Aligned_cols=161 Identities=14% Similarity=0.163 Sum_probs=106.2
Q ss_pred hhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHH---H-HhcCchHHHHHHHH
Q 014832 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC---I-TKHSPQYKILMIGR 131 (417)
Q Consensus 57 ~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~---~-~~~~~~~~~l~~~r 131 (417)
..++|.+. +++|.+..+.++..+...++..++.+..|+++||+|||+.+..+.+...++. + ...+++...+++++
T Consensus 270 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (490)
T PRK10642 270 LTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGL 349 (490)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 45677555 5789988888888888889999999999999999999999888765443322 2 23345677788889
Q ss_pred HHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHH
Q 014832 132 ILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (417)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~ 211 (417)
++.|++.+...+.. ..++.|. .+.+.+....+....++. +++.++|.+.+++.+.. .+|+.+++...+.+++.
T Consensus 350 ~~~g~~~~~~~g~~-~~~~~~~----~p~~~Rg~~~g~~~~~~~-~~g~~~p~i~g~l~~~~-~~~~~~~~~~~~~~~i~ 422 (490)
T PRK10642 350 LMLAVILNCFTGVM-ASTLPAM----FPTHIRYSALAAAFNISV-LVAGLTPTLAAWLVEST-QNLMMPAYYLMVVAVIG 422 (490)
T ss_pred HHHHHHHHHHHHHH-HHHHHHH----CCCccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHh-CCchHHHHHHHHHHHHH
Confidence 99988776655555 5566776 222222334444444433 33456676777666543 14777777666666665
Q ss_pred HHHHHhhccccCCC
Q 014832 212 MVIILSSWTENYGD 225 (417)
Q Consensus 212 ~~~~~~~~~~~~~~ 225 (417)
.+..+ ..||+++.
T Consensus 423 ~~~~~-~~pes~~~ 435 (490)
T PRK10642 423 LITGV-TMKETANR 435 (490)
T ss_pred HHHHH-HhccccCC
Confidence 55554 56877554
No 133
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.36 E-value=5.8e-12 Score=99.86 Aligned_cols=135 Identities=20% Similarity=0.244 Sum_probs=101.8
Q ss_pred HHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccc
Q 014832 79 IAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRG 157 (417)
Q Consensus 79 s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~ 157 (417)
+...++..+++++.|++.||+|||+.+..+.....++.+ ....++++.+.+.+++.|++.+...+.. ..++.|..++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~- 82 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAG-AALIADIYPP- 82 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHCCh-
Confidence 445677888999999999999999999999999999888 8888999999999999999999887777 5677777111
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccc
Q 014832 158 FEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTE 221 (417)
Q Consensus 158 ~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 221 (417)
+.+....+..... ..++..+++.+.+.+.+.. +|++.+++.+...++..+......||
T Consensus 83 ---~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 83 ---EERGVALGLMSAG-IALGPLLGPPLGGVLAQFL--GWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred ---hhhhHHHHHHHHh-HHHHHHHhHHhHHHHhccc--chHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 1122233333333 5566677777777777776 89999999887777766665544443
No 134
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.36 E-value=1.5e-10 Score=108.53 Aligned_cols=149 Identities=13% Similarity=0.090 Sum_probs=113.8
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
..+.|...+|.|.++.+.|.+.+...++..+..++.|++.||+|+|+.+..+.+..+++.+ ....++.+.+++..++.|
T Consensus 225 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 304 (382)
T PRK11128 225 YGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHC 304 (382)
T ss_pred HHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 4555555578999999999999999899999999999999999999999999999888888 888899999999999999
Q ss_pred HHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~ 214 (417)
++.+...+.. ..++.+. +++. .....+.....+..+|..+++.+++.+.+.+ |+ ..|+..+.+.++++.+
T Consensus 305 ~~~~~~~~~~-~~~~~~~-~~~~----~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~--g~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 305 GTFTVCHLAA-MRYIAAR-PGSE----VIRLQALYSALAMGGSIAIMTVLSGFLYQHL--GA-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHH-HHHHHHC-CHhh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cH-HHHHHHHHHHHHHHHH
Confidence 9988876666 4455554 1111 2223444444445667788888999998887 76 4666666666555444
No 135
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.36 E-value=3.1e-09 Score=97.15 Aligned_cols=319 Identities=16% Similarity=0.145 Sum_probs=194.4
Q ss_pred hhHH-HHHH-hcCCCcchHH-HHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHH
Q 014832 58 PYVY-YLYS-TYGFGKGEIG-QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRIL 133 (417)
Q Consensus 58 ~~l~-~l~~-~~g~s~~~~g-~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l 133 (417)
|++. .+.+ +.|++..|+. -+.-+..-.+....++...+.|..+.|++++++.+...+... ..+.++.+.+-+..+.
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~ 103 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFF 103 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHH
Confidence 5544 3444 4899998885 455555566666777999999999999999999999888888 8899999999999999
Q ss_pred HHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHH
Q 014832 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~ 213 (417)
.|++.+.. .+- .+++-...++....+ ..+........|. .++..+++.+......+++...++......++.+
T Consensus 104 yg~~~a~e-vay-~sYiys~v~~~~yq~-vts~~raa~l~g~----~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~ 176 (412)
T PF01770_consen 104 YGLATAAE-VAY-YSYIYSVVDKEHYQK-VTSYTRAATLVGR----FISSLLGQLLVSFGGVSYFQLNYISLASVSLALL 176 (412)
T ss_pred HHHHHHHH-HHH-HHHheeecCHHHHHH-HHHHHHHHHHHHH----HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 99998875 333 455544422222111 1212222333333 4444555544443212455565555544444444
Q ss_pred HHHhhccccCC-------C-----------C--CCchh------------------HHHHHHhHHHHHhccchhHHHHHH
Q 014832 214 IILSSWTENYG-------D-----------P--SESKD------------------LLTQFRGAAVAIASDEKIALLGAI 255 (417)
Q Consensus 214 ~~~~~~~~~~~-------~-----------~--~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~ 255 (417)
+.+ .+|..++ + + ++.++ ..+...+.+++..++++++...+.
T Consensus 177 ~~~-fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlW 255 (412)
T PF01770_consen 177 IAL-FLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLW 255 (412)
T ss_pred HHH-HcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 433 2332110 0 0 00000 001122345566677887777776
Q ss_pred HHHHHhHHHHHHHhhhccccCCC-----CCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHH
Q 014832 256 QSLFEGSMYTFVFLWTPALSPND-----EEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLP 330 (417)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~ 330 (417)
..+.....+. ..+|.....++. ...-.|.+-+...+.+.++.+..|++..+..+.....+.....+.+.+++++
T Consensus 256 Wa~atcgy~q-v~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm 334 (412)
T PF01770_consen 256 WAFATCGYYQ-VINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLM 334 (412)
T ss_pred HHHHHhHHHH-HHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554444333 333343333331 1222377777788888889999999855554432233344444445555555
Q ss_pred HHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHH
Q 014832 331 IVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFV 400 (417)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~ 400 (417)
.... +.|...++.++++..+....+....-++....+|.-|...|+.++..-+..
T Consensus 335 ~~t~---------------~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQ 389 (412)
T PF01770_consen 335 SFTG---------------NIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQ 389 (412)
T ss_pred HHhh---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHH
Confidence 5555 788999999999999988888888989999999999999997655433333
No 136
>PRK03545 putative arabinose transporter; Provisional
Probab=99.35 E-value=1.8e-10 Score=108.35 Aligned_cols=152 Identities=12% Similarity=0.051 Sum_probs=105.4
Q ss_pred hhHHHH-HHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH--HhcCchHHHHHHHHHHH
Q 014832 58 PYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI--TKHSPQYKILMIGRILG 134 (417)
Q Consensus 58 ~~l~~l-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~--~~~~~~~~~l~~~r~l~ 134 (417)
.+++++ .++.|.|..+.+++.+...++..+++++.|+++||+|||+... +..+..++.. ....++.+.+.+..++.
T Consensus 226 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 304 (390)
T PRK03545 226 SYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFW 304 (390)
T ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 344444 4557999999999999999999999999999999999887544 4444444433 45567788888888999
Q ss_pred HHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHH
Q 014832 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~ 214 (417)
|++.+...+.. ...+.|..++. .....+..... ..+|..+++.+++.+.+++ |++..|+..+.+.+++.+.
T Consensus 305 g~~~~~~~~~~-~~~~~~~~~~~-----~~~~~g~~~~~-~~~g~~~G~~~~G~~~~~~--g~~~~~~~~~~~~~~~~~~ 375 (390)
T PRK03545 305 GIAIMCIGLAM-QVKVLKLAPDA-----TDVAMALFSGI-FNIGIGAGALLGNQVSLHL--GLSSIGYVGAALALAALVW 375 (390)
T ss_pred HHHHhcchHHH-HHHHHHhCCCc-----HHHHHHHHHHH-HHHHHHHHHHHHHHHHhcc--ChhHHHHHHHHHHHHHHHH
Confidence 99876655554 44555542211 12233333333 4555667778888888887 9999999998888777766
Q ss_pred HHhhc
Q 014832 215 ILSSW 219 (417)
Q Consensus 215 ~~~~~ 219 (417)
.....
T Consensus 376 ~~~~~ 380 (390)
T PRK03545 376 SILIF 380 (390)
T ss_pred HHHHc
Confidence 65333
No 137
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.34 E-value=2.7e-10 Score=107.20 Aligned_cols=161 Identities=14% Similarity=0.075 Sum_probs=109.9
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc-hHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP-QYKILMIGRILG 134 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~-~~~~l~~~r~l~ 134 (417)
...+|.+.+++|.+..+.|...+...++..++++..|++.||+|||+.+..+..+..++.. ....+ +...+ .-++.
T Consensus 225 ~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~ 302 (393)
T PRK09705 225 IAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVC 302 (393)
T ss_pred HHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHH
Confidence 4567766677899999999999999999999999999999999999999888877777666 44333 32222 23456
Q ss_pred HHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHH
Q 014832 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVI 214 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~ 214 (417)
|++.+...+.. .....+... ..+......+..... ..++..++|.+.+++.+.. .+|+..|.+.++.+++..+.
T Consensus 303 g~g~g~~~~~~-~~~~~~~~~---~~~~~g~~~g~~~~~-~~~~~~~gp~~~G~l~~~~-g~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK09705 303 GLGLGGAFPLC-LLLALDHSV---QPAIAGKLVAFMQGI-GFIIAGLAPWFSGVLRSIS-GNYLMDWAFHALCVVGLMII 376 (393)
T ss_pred HHhccchHHHH-HHHHHhhcC---CHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHh-CCchHHHHHHHHHHHHHHHH
Confidence 77777776655 334444311 112233345555555 4555677888888888875 13788888887777766666
Q ss_pred HHhhccccCCC
Q 014832 215 ILSSWTENYGD 225 (417)
Q Consensus 215 ~~~~~~~~~~~ 225 (417)
.....||++++
T Consensus 377 ~~~~~~~~~~~ 387 (393)
T PRK09705 377 TLRFAPARFPQ 387 (393)
T ss_pred HHHhccccccc
Confidence 55555665443
No 138
>PRK12382 putative transporter; Provisional
Probab=99.34 E-value=1.5e-10 Score=108.93 Aligned_cols=150 Identities=21% Similarity=0.313 Sum_probs=111.7
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
..+.|...++.|.++ .+...+...++..+++++.|++.||+|+||.+..+..+.+++.+ ..+.++.+.+.+..++.|
T Consensus 236 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 313 (392)
T PRK12382 236 GTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTG 313 (392)
T ss_pred HHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 455555556666653 45666677788889999999999999999999999888888888 888888888888999999
Q ss_pred HHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~ 215 (417)
++.+...+.. ...+.|. ...+.+....+..... ..+|..++|.+.+.+.+.. ||+..|.+.+...++..+..
T Consensus 314 ~~~~~~~~~~-~~~~~~~----~~~~~~g~~~g~~~~~-~~~g~~ig~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 314 AGCSLIFPAL-GVEVVKR----VPSQVRGTALGGYAAF-QDIAYGVSGPLAGMLATSF--GYPSVFLAGAISAVLGIIVT 385 (392)
T ss_pred HHHHhHHHHH-HHHHHHh----cCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHh--CchHHHHHHHHHHHHHHHHH
Confidence 9988877765 4455555 1122223344444443 5566677888888888887 99999999988877776665
Q ss_pred H
Q 014832 216 L 216 (417)
Q Consensus 216 ~ 216 (417)
.
T Consensus 386 ~ 386 (392)
T PRK12382 386 I 386 (392)
T ss_pred H
Confidence 5
No 139
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.33 E-value=1.9e-10 Score=108.87 Aligned_cols=153 Identities=15% Similarity=0.136 Sum_probs=111.3
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
..++|.+.++.|.++.+.+...+...++..+++++.|+++||+|||+.+..+.+...++.+ ....++.+.+.+..++.|
T Consensus 240 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 319 (406)
T PRK11551 240 LNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAG 319 (406)
T ss_pred HHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 3456777788899999999999999999999999999999999999999887777777777 777778877777888888
Q ss_pred HHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~ 215 (417)
++.+...+.. .++..|. .+.+.+....+..... ..+|..++|.+.+.+.++. .+|...++......++..+..
T Consensus 320 ~~~~~~~~~~-~~~~~~~----~p~~~~g~~~g~~~~~-~~~g~~~g~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 320 LFVVGGQSVL-YALAPLF----YPTQVRGTGVGAAVAV-GRLGSMAGPLLAGQLLALG-RSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred HHHHhHHHHH-HHHHHHH----cchhhhhhhhhHHHHh-hhHHHHHHhhhHhhhhccC-CchHHHHHHHHHHHHHHHHHH
Confidence 8877666666 5567776 2222233344555555 5667778888888877653 145556666655555555544
Q ss_pred H
Q 014832 216 L 216 (417)
Q Consensus 216 ~ 216 (417)
+
T Consensus 393 ~ 393 (406)
T PRK11551 393 L 393 (406)
T ss_pred H
Confidence 4
No 140
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.28 E-value=4.3e-10 Score=103.84 Aligned_cols=154 Identities=21% Similarity=0.209 Sum_probs=123.9
Q ss_pred hhhhhHHHHHHh-cCCCcchHHHHHHHHHHHHhhhhccccccccccCchH-HHHHHHHHHHHHHH-HhcCchHHHHHHHH
Q 014832 55 LQGPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKR-ACVTYCLTYILSCI-TKHSPQYKILMIGR 131 (417)
Q Consensus 55 ~~~~~l~~l~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~-~~~~~~~~~~~~~~-~~~~~~~~~l~~~r 131 (417)
....+.|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+ ....++.+...+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 272 (352)
T cd06174 193 GLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVAL 272 (352)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 335666666655 4999999999999999999999999999999999999 99999999999999 88888899999999
Q ss_pred HHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHH
Q 014832 132 ILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (417)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~ 211 (417)
++.|++.+...+.. ..++.|. .+.+.+....+..... ..++..+++.+.+.+.+.. +|+..+.+.+++.++.
T Consensus 273 ~~~g~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~i~~~i~g~l~~~~--~~~~~~~~~~~~~~i~ 344 (352)
T cd06174 273 LLLGFGLGFAFPAL-LTLASEL----APPEARGTASGLFNTF-GSLGGALGPLLAGLLLDTG--GYGGVFLILAALALLA 344 (352)
T ss_pred HHHHHHHhccchhH-HHHHHhh----cCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhccc--CcchHHHHHHHHHHHH
Confidence 99999999988877 6678777 2222333344444444 6666778888888887777 9999999999888777
Q ss_pred HHHHH
Q 014832 212 MVIIL 216 (417)
Q Consensus 212 ~~~~~ 216 (417)
.+...
T Consensus 345 ~i~~~ 349 (352)
T cd06174 345 ALLLL 349 (352)
T ss_pred HHHhe
Confidence 66543
No 141
>PRK09952 shikimate transporter; Provisional
Probab=99.27 E-value=5.9e-10 Score=106.37 Aligned_cols=159 Identities=16% Similarity=0.076 Sum_probs=107.2
Q ss_pred hhhHHH-HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hhc---C-chHHHHHHH
Q 014832 57 GPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKH---S-PQYKILMIG 130 (417)
Q Consensus 57 ~~~l~~-l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~---~-~~~~~l~~~ 130 (417)
..+.|. +.+++|.++.+...+.....+...++.+..|+++||+||||++..+.++..++.+ ... . ++.+.+++.
T Consensus 270 ~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T PRK09952 270 TAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFS 349 (438)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 345553 4467888887665555556667778888999999999999999888766555443 322 2 234444555
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHH
Q 014832 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
.++.+++.+...+.. ..++.|. .+.+.+....+.....+..+++.++|.+.+.+.+....+|+.++...++..++
T Consensus 350 ~~l~~~~~~~~~~~~-~~~~~e~----~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i 424 (438)
T PRK09952 350 IMLANIAHDMVVCVQ-QPMFTEM----FGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLI 424 (438)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHH----CCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 677778877766666 5678887 22233344555656666667788889888888774423588888877777777
Q ss_pred HHHHHHhhccc
Q 014832 211 GMVIILSSWTE 221 (417)
Q Consensus 211 ~~~~~~~~~~~ 221 (417)
..+..+ ..+|
T Consensus 425 ~~v~~~-~~~~ 434 (438)
T PRK09952 425 SAMTAL-LMKD 434 (438)
T ss_pred HHHHHH-Hccc
Confidence 666655 4554
No 142
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.26 E-value=2.9e-10 Score=113.18 Aligned_cols=139 Identities=20% Similarity=0.154 Sum_probs=109.7
Q ss_pred HHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcc
Q 014832 77 LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNK 155 (417)
Q Consensus 77 ~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~ 155 (417)
...+..++..++.++.|+++||+|||++++.+.++.+++.+ .++.++...+++.+++.|++.+..++.. ..+++|+
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~-~a~~aEl-- 676 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNAL-DVLTVEL-- 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--
Confidence 34556688899999999999999999999999999999998 8888888888888899898888777777 6789998
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCC
Q 014832 156 RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD 225 (417)
Q Consensus 156 r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 225 (417)
.+.+.+...+++.... ..+|.+++|.+++.+.+. +...+|++.+++.+++.++.. .+||++++
T Consensus 677 --~Pt~~Rgta~Gi~~~~-~rlGaiigp~i~g~L~~~---~~~~pf~i~a~~lll~~ll~~-~LPET~~~ 739 (742)
T TIGR01299 677 --YPSDKRATAFGFLNAL-CKAAAVLGILIFGSFVGI---TKAAPILFASAALACGGLLAL-KLPDTRGQ 739 (742)
T ss_pred --cCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH-hCCCCccc
Confidence 5555555566666666 678888888888777654 456788888777777666655 66876543
No 143
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.26 E-value=2.9e-09 Score=102.93 Aligned_cols=147 Identities=16% Similarity=0.201 Sum_probs=98.1
Q ss_pred HHHHhcCCCcchHHHHHH-HHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH----HhcC-chHHHHHHHHHHHH
Q 014832 62 YLYSTYGFGKGEIGQLFI-AGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI----TKHS-PQYKILMIGRILGG 135 (417)
Q Consensus 62 ~l~~~~g~s~~~~g~~~s-~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~----~~~~-~~~~~l~~~r~l~G 135 (417)
.+.+++|.|+.+.+++.. ...++..++.++.|+++||+|+||.+.++.++.++..+ .+.. ++.+.+...-++..
T Consensus 248 ~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~ 327 (491)
T PRK11010 248 FLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFEN 327 (491)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 345679999999999874 66689999999999999999999988776655444333 2333 35555555556655
Q ss_pred HHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~ 215 (417)
++.+...+.. .++..+..++..... .++..+.. ..+|..+++.+.+.+.+.. ||+..|.+.++..+++.+..
T Consensus 328 ~~~g~~~~~~-~a~~~~l~~~~~~~t----~~gl~~s~-~~lg~~~~~~~~G~l~~~~--G~~~~f~~~~~~~l~~l~~~ 399 (491)
T PRK11010 328 LCGGMGTAAF-VALLMTLCNKSFSAT----QFALLSAL-SAVGRVYVGPVAGWFVEAH--GWPTFYLFSVAAAVPGLLLL 399 (491)
T ss_pred HHHHHHHHHH-HHHHHHHcCCCCcHH----HHHHHHHH-HHHHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHH
Confidence 5555444444 445555522222222 23334444 4566677777788888887 99999999888887776666
Q ss_pred H
Q 014832 216 L 216 (417)
Q Consensus 216 ~ 216 (417)
.
T Consensus 400 ~ 400 (491)
T PRK11010 400 L 400 (491)
T ss_pred H
Confidence 5
No 144
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.26 E-value=1.6e-09 Score=102.57 Aligned_cols=332 Identities=16% Similarity=0.092 Sum_probs=185.8
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccC-----chHHHHHHHHHHHHHHH-HhcCc----hHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-----RKRACVTYCLTYILSCI-TKHSP----QYKI 126 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G-----rr~~~~~~~~~~~~~~~-~~~~~----~~~~ 126 (417)
.+..|.+.+++|+++++.....+...+...+ .++.|.++|.+- ||+-++++.++.+++.+ .+..+ +...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 3455677899999999999988888888766 678999999863 55556667666655555 44433 4566
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHH
Q 014832 127 LMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAA 205 (417)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~ 205 (417)
..+.-++..+|.+.....++ ++..|. +++....+..++..... ..+|.+++..+++.+.+.. +++..|.+.+
T Consensus 89 ~~~~l~la~~g~a~~DV~aD-a~vvE~~~~~p~~~g~lqS~~~~~----~~~G~lv~~~l~G~l~~~~--~~~~~f~i~~ 161 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAAD-ALVVELARREPESRGDLQSFVWGV----RSVGSLVGSLLSGPLLDSF--GPQGVFLISA 161 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhh-HHHHHHhhcCCchhHHHHHHHHHH----HHHHHHHHHHhhhhhhhcC--CCeEEehHHH
Confidence 66777888888888888884 577787 22222222333222222 4455566667777777777 8999999888
Q ss_pred HHHHHHHHHHHhhccccCCCCCC-------c--hhH---HHHHHhHHHHHhccchhHHHHH-HHHHHHhHHHHHHHhhhc
Q 014832 206 CFLAIGMVIILSSWTENYGDPSE-------S--KDL---LTQFRGAAVAIASDEKIALLGA-IQSLFEGSMYTFVFLWTP 272 (417)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 272 (417)
++..+..+......+|++.++++ + +.. .++.....++.++++.++...+ ...+....... ... ..
T Consensus 162 ~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-~~a-~~ 239 (433)
T PF03092_consen 162 ALPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSI-SSA-SS 239 (433)
T ss_pred HHHHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCC-CCc-cE
Confidence 77666655555344442111110 0 000 1223344556666666665555 22222111110 000 01
Q ss_pred cccC-C---CCCCChhHHH---HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHH-hhccCCCCCCC
Q 014832 273 ALSP-N---DEEIPHGFIF---ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVT-SFLVAPSNVKS 344 (417)
Q Consensus 273 ~~~~-~---~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 344 (417)
.|.+ + +.+.+..... .+..++.++|..+..+...+...| +.+.....+..+..+.-... ...+.. -
T Consensus 240 fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R--~~~~~t~~~~~~~~l~~~~lv~~~n~~----~ 313 (433)
T PF03092_consen 240 FYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWR--RIFVVTTLVSVLASLFDLLLVTRWNLD----L 313 (433)
T ss_pred EEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH--HHHHHHHHHHHHHhcccEEEEEEEeee----e
Confidence 1111 1 2234443333 344445566666666555554333 45444443333322221111 100000 0
Q ss_pred CCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 345 GGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 345 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
+.. +.+..+.-.++..+..+..+-....+.+|+.|+..-|+.+++.....|++..++...
T Consensus 314 -Gi~-d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~l 373 (433)
T PF03092_consen 314 -GIP-DQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTL 373 (433)
T ss_pred -CcC-CeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 000 112333344555555566666677899999999999999998888888877766553
No 145
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.24 E-value=1.1e-09 Score=103.07 Aligned_cols=160 Identities=14% Similarity=0.064 Sum_probs=102.8
Q ss_pred HHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHH-HHHhhhhccccccccccCchHHHHHHHHHHHHHHH--Hhc----
Q 014832 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGF-GSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI--TKH---- 120 (417)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~-~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~--~~~---- 120 (417)
+..........+.+...+|.|++++++|++..... ....++.++.|++.||+|+|+.+..+....++..+ ...
T Consensus 219 l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 298 (390)
T TIGR02718 219 LSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFW 298 (390)
T ss_pred HHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33333433344566666789999999999888775 56677788999999999999999887766533333 211
Q ss_pred -CchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCch
Q 014832 121 -SPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVA 199 (417)
Q Consensus 121 -~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~ 199 (417)
.++.+.+.....+.+++.+...+.. ...+.+...++ +.....++..+.. ..+|..++|.+++.+.+.. |++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~---~~~g~~~~~~~~~-~~lg~~~g~~~~G~l~~~~--G~~~ 371 (390)
T TIGR02718 299 LAPGIAVAWSCSAFGSLITGITSVAI-YTAFMRFAGDG---DQAGTDVTAVQST-RDLGELIASSIAGYLTDRF--GYAG 371 (390)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCcc---cchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH--ccHH
Confidence 2333444455556666666665655 33444441111 1122233444444 5667788888888888887 9999
Q ss_pred hHHHHHHHHHHHHHH
Q 014832 200 PFDAAACFLAIGMVI 214 (417)
Q Consensus 200 ~f~~~~~~~~~~~~~ 214 (417)
.|...+++.+++...
T Consensus 372 ~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 372 GFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999888777666554
No 146
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.23 E-value=1.7e-09 Score=102.19 Aligned_cols=150 Identities=16% Similarity=0.178 Sum_probs=105.9
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHH-HHHHHHHHHHH-Hh-----cCchHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV-TYCLTYILSCI-TK-----HSPQYKILMI 129 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~-~~~~~~~~~~~-~~-----~~~~~~~l~~ 129 (417)
..+.|.+.+++|.+..+.+.+.+...++..++.+..|+++||+|||+.+. .+.+..+++.+ .. ..++.+...+
T Consensus 242 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~ 321 (402)
T TIGR00897 242 AVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALI 321 (402)
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHH
Confidence 45677667889999999999988999999999999999999999988764 33333333322 22 2346677777
Q ss_pred HHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHH
Q 014832 130 GRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (417)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~ 209 (417)
..++.|++.+...+. ...+.|..++ ......+..+.. ..++..++|.+.+.+.+.. ||+..+++.++..+
T Consensus 322 ~~~~~G~~~~~~~~~--~~~~~~~~~~-----~~g~~~g~~~~~-~~lg~~~gp~i~g~l~~~~--g~~~~~~~~a~~~~ 391 (402)
T TIGR00897 322 IAIALGIFLAGYVPL--AAVFPTLAPK-----HKGAAMSVLNLS-AGLSAFLAPAIAVLFIGFF--GAIGVVWIFAALYV 391 (402)
T ss_pred HHHHHHHHHHHHHHH--HHHHHhhCcc-----hhHHHHHHHHHH-HHHHHHHHHHHHHHHHhhc--chHHHHHHHHHHHH
Confidence 888889888775443 2345555221 123344444444 6677788888888888888 99999999887776
Q ss_pred HHHHHHH
Q 014832 210 IGMVIIL 216 (417)
Q Consensus 210 ~~~~~~~ 216 (417)
+..++..
T Consensus 392 i~~~~~~ 398 (402)
T TIGR00897 392 VSAFLTA 398 (402)
T ss_pred HHHHHHH
Confidence 6665544
No 147
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.23 E-value=4e-10 Score=108.55 Aligned_cols=153 Identities=10% Similarity=0.008 Sum_probs=105.4
Q ss_pred hhhHHH-HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHH--H-HhcCchHHHHHHHHH
Q 014832 57 GPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC--I-TKHSPQYKILMIGRI 132 (417)
Q Consensus 57 ~~~l~~-l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~--~-~~~~~~~~~l~~~r~ 132 (417)
...+|. +.+++|+|..+.++..+...++..++.++.|+++||+|||+.+........++. + ....++.+...+.++
T Consensus 278 ~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (467)
T PRK09556 278 DNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLF 357 (467)
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 455664 457799999999999999999999999999999999999988766544443332 2 334456666777788
Q ss_pred HHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh------------hccCCCchh
Q 014832 133 LGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD------------SFSLGPVAP 200 (417)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~------------~~~~gw~~~ 200 (417)
+.|+......... .....|. .+.+......++....|+..|..++|.+.+.+.+ .. +|+..
T Consensus 358 ~~G~~~~~~~~~~-~~~~~~~----~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~--~~~~~ 430 (467)
T PRK09556 358 ALGFLVFGPQLLI-GVAAVGF----VPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT--GWAGT 430 (467)
T ss_pred HHHHHHhhHHHHH-HHHHHhh----cchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccccccc--ChHHH
Confidence 8886533322222 2344565 3334455566666666555577788888888887 34 79999
Q ss_pred HHHHHHHHHHHHHHHH
Q 014832 201 FDAAACFLAIGMVIIL 216 (417)
Q Consensus 201 f~~~~~~~~~~~~~~~ 216 (417)
|++..+..+++.+...
T Consensus 431 f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 431 FAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9988777666655444
No 148
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.20 E-value=2.9e-09 Score=96.85 Aligned_cols=149 Identities=21% Similarity=0.190 Sum_probs=101.9
Q ss_pred HHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hhc-CchHHHHHHHHHHHHHH
Q 014832 60 VYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKH-SPQYKILMIGRILGGIA 137 (417)
Q Consensus 60 l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~-~~~~~~l~~~r~l~G~~ 137 (417)
-|.+.+..|+|.+.++++...+.++..+++...|+++|| +.|+.+.....+.++..+ ..+ .++.+..++.-++.|++
T Consensus 235 ~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a 313 (394)
T COG2814 235 RPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFA 313 (394)
T ss_pred HHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 335567789999999999999999999999999999999 999999888888877777 444 45566666666666666
Q ss_pred hhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHh
Q 014832 138 TSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILS 217 (417)
Q Consensus 138 ~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~ 217 (417)
........ ..-+++. .+...+.....+... .++|-.+|..+++.+.+++ |+....++.+++.+++..+...
T Consensus 314 ~~~~~~~~-~~~~a~~--~p~~~~~a~sl~~aa----~nlgia~GA~lGG~v~~~~--g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 314 FSPALQGL-QTRLARL--APDAADLAGSLNVAA----FNLGIALGAALGGLVLDAL--GYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred hhhhhhHH-HHHhccc--CCCchHHHHHHHHHH----HHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHHH
Confidence 55443322 2222222 111122222223233 4444455566666777777 9999999999988888777663
Q ss_pred h
Q 014832 218 S 218 (417)
Q Consensus 218 ~ 218 (417)
.
T Consensus 385 ~ 385 (394)
T COG2814 385 S 385 (394)
T ss_pred H
Confidence 3
No 149
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.19 E-value=8.5e-10 Score=105.74 Aligned_cols=151 Identities=13% Similarity=0.019 Sum_probs=108.8
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccccc--CchHHHHH--HHHHHHHHHH-HhcCchHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ--GRKRACVT--YCLTYILSCI-TKHSPQYKILMIGR 131 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~--Grr~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~r 131 (417)
..++|.+.+++|.+..+.+++.++..++..+++++.|+++||. ++|+...+ +....+++.+ ....++++.+++.+
T Consensus 261 ~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~ 340 (455)
T TIGR00892 261 IIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYC 340 (455)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 4566666788999999999999999999999999999999983 34443333 3344455555 66778889899999
Q ss_pred HHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHH
Q 014832 132 ILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (417)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~ 211 (417)
++.|++.+...+.. ..++.|. ...+......++.... ..+|..++|.+++.+.+.. .+|+..|++.+++.+++
T Consensus 341 ~~~G~~~g~~~~~~-~~~~~~~----~~~~~~g~~~g~~~~~-~~lg~~igp~i~G~l~~~~-g~~~~~f~~~~~~~li~ 413 (455)
T TIGR00892 341 IFFGLSFGSVGALL-FEVLMDL----VGAQRFSSAVGLVTIV-ECCAVLIGPPLAGRLVDAT-KNYKYIFYASGSIVVSA 413 (455)
T ss_pred HHHHHHhchHHHHH-HHHHHHH----hhHHHHhhHHhHHHHH-HHHHHHccccceeeeehhc-CCcchHHHHhhHHHHHH
Confidence 99999988877776 5677776 2222233344444444 6677788888888887764 14999999988776665
Q ss_pred HHH
Q 014832 212 MVI 214 (417)
Q Consensus 212 ~~~ 214 (417)
.+.
T Consensus 414 ~~~ 416 (455)
T TIGR00892 414 GLF 416 (455)
T ss_pred HHH
Confidence 543
No 150
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.19 E-value=5.2e-10 Score=105.10 Aligned_cols=143 Identities=14% Similarity=0.108 Sum_probs=101.6
Q ss_pred hhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHH--H-Hhc--CchHHHHHHH
Q 014832 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC--I-TKH--SPQYKILMIG 130 (417)
Q Consensus 57 ~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~--~-~~~--~~~~~~l~~~ 130 (417)
..++|.+. +++|.++.+.+...+...++..++.++.|+++||+|||+.+.....+..+.. + ... .++.+.+...
T Consensus 239 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (394)
T TIGR00883 239 TTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFL 318 (394)
T ss_pred HHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 45666555 6789999999999999999999999999999999999998775544433322 2 222 3566777778
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCC-CchhHHHHHH
Q 014832 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG-PVAPFDAAAC 206 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~g-w~~~f~~~~~ 206 (417)
.++.|++.+...+.. ..++.|. ++|+. ..+.....+..+|..++|.+++.+.++. | |+..++....
T Consensus 319 ~~~~g~~~~~~~~~~-~~~~~~~~p~~~~~~-------~~~~~~~~~~~~g~~~~p~~~g~l~~~~--g~~~~~~~~~~~ 388 (394)
T TIGR00883 319 VLGLALIGGMYTGPM-GSFLPELFPTEVRYT-------GASLAYNLAGAIFGGFAPYIAAALVAMT--GDWYAIGYYLAA 388 (394)
T ss_pred HHHHHHHHHHHhhhH-HHHHHHhCCccceee-------EeeehhHhHHHHHhhHHHHHHHHHHHHc--CcchhHHHHHHH
Confidence 888998888877777 5678887 33333 2222233445566678888888888876 6 8887776655
Q ss_pred HHH
Q 014832 207 FLA 209 (417)
Q Consensus 207 ~~~ 209 (417)
..+
T Consensus 389 ~~l 391 (394)
T TIGR00883 389 LAL 391 (394)
T ss_pred HHH
Confidence 443
No 151
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.18 E-value=1.2e-09 Score=102.87 Aligned_cols=140 Identities=14% Similarity=0.133 Sum_probs=103.9
Q ss_pred CCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHH
Q 014832 68 GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFE 146 (417)
Q Consensus 68 g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 146 (417)
+.+..+.|.+.+...+...++.+..|++.||+|||+.+.++..+.++... ...+++.+.+++.+++.|++........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~- 328 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGC- 328 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH-
Confidence 55566788889888889999999999999999999999999988888877 7888899988899999998865543333
Q ss_pred HHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHH
Q 014832 147 SWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (417)
Q Consensus 147 ~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~ 215 (417)
..+..+. ++|.. ....+.+......+|..+++.+++++.+.. ||+.+|.+.+++.++..+..
T Consensus 329 ~~~~~~~~~~~~~-----at~~~~~~~~~~~lg~~~~~~l~G~l~~~~--G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 329 FKYITSQFDVRLS-----ATIYLIGFQFAKQLAMIFLSTLAGNMYDSI--GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHhCCcceE-----EEeehHHHHHHHHHHHHHHHHhHHHHHHhc--ccHHHHHHHHHHHHHHHHHH
Confidence 2334433 22221 112222222346777788888889998888 99999999888776665543
No 152
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.17 E-value=5.6e-09 Score=100.54 Aligned_cols=149 Identities=22% Similarity=0.236 Sum_probs=110.0
Q ss_pred hhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHH
Q 014832 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILG 134 (417)
Q Consensus 57 ~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~ 134 (417)
...+|.+. +++|.++...|++.++..+|..++++..+++.+|+++++.+..+.+..+++.+ .+++++.+..++.-++.
T Consensus 238 ~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~ 317 (524)
T PF05977_consen 238 WALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLA 317 (524)
T ss_pred HHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 34566554 67899999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHH
Q 014832 135 GIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~ 211 (417)
|++.....+.. .+.+.+. +.||+..+ .+......+. .+|..+.+.+.+.+ |.+..+.+.++..++.
T Consensus 318 G~~~~~~~~~~-~t~~Q~~~P~~~~GRv~s----i~~~~~~g~~----~lGsll~G~la~~~--g~~~al~~a~~~lll~ 386 (524)
T PF05977_consen 318 GAAWIIANSSL-NTLVQLSVPDWVRGRVFS----IYQMVFFGGM----PLGSLLWGFLADHF--GVRTALLIAGAALLLS 386 (524)
T ss_pred HHHHHHHHHHH-HHHHHHhCCHHHHhHHHH----HHHHHHHHHH----HHHHHHHHHHHHHh--CHHHHHHHHHHHHHHH
Confidence 99988876666 4454444 33343222 2222222333 44445555555555 8888888877665555
Q ss_pred HHHHH
Q 014832 212 MVIIL 216 (417)
Q Consensus 212 ~~~~~ 216 (417)
.++..
T Consensus 387 ~~~~~ 391 (524)
T PF05977_consen 387 ALIAL 391 (524)
T ss_pred HHHHH
Confidence 55443
No 153
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.16 E-value=7.8e-09 Score=96.92 Aligned_cols=146 Identities=14% Similarity=0.088 Sum_probs=99.8
Q ss_pred HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hh-cCchHHHHHHHHHHHHHHhh
Q 014832 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TK-HSPQYKILMIGRILGGIATS 139 (417)
Q Consensus 62 ~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~-~~~~~~~l~~~r~l~G~~~~ 139 (417)
.+.+++|.++.+.+++.+...++..+++++.|++.||+|+|+.+..+..+.+++.+ .. ..++.+...+..++.+.+..
T Consensus 225 ~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~ 304 (382)
T PRK10091 225 YMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLF 304 (382)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 44456899999999999999999999999999999999999999988888777766 43 34555666666666676655
Q ss_pred hhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-ccCCCchhHHHHHHHHHHHHHHHH
Q 014832 140 LLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS-FSLGPVAPFDAAACFLAIGMVIIL 216 (417)
Q Consensus 140 ~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~-~~~gw~~~f~~~~~~~~~~~~~~~ 216 (417)
...+........+. .+++. .. ...... ...+|..++|.+++.+.+. . +|+..+.+.++..++......
T Consensus 305 ~~~~~~~~~~~~~~-~~~~~---~~--~~~~~~-~~~~g~~~Gp~~~G~l~~~~~--~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 305 ALSAPLQILLLQNA-KGGEL---LG--AAGGQI-AFNLGSAIGAYCGGMMLTLGL--AYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred hhhHHHHHHHHHhC-CcchH---HH--HHHHHH-HHHHHHHHHHHHhHHHHHccc--CcchHHHHHHHHHHHHHHHHH
Confidence 44443322223222 22211 11 111222 2567778888888888874 4 799999988766555554443
No 154
>PRK10504 putative transporter; Provisional
Probab=99.14 E-value=4.2e-09 Score=101.74 Aligned_cols=96 Identities=22% Similarity=0.202 Sum_probs=71.5
Q ss_pred hhhHHHHHH-hcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC---chHHHHHHHH
Q 014832 57 GPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS---PQYKILMIGR 131 (417)
Q Consensus 57 ~~~l~~l~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~---~~~~~l~~~r 131 (417)
..+.|.+.+ .+|.++.+.++......++..++.++.|++.||+|||+++..+....++..+ ..+. ++.+.+.+..
T Consensus 281 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (471)
T PRK10504 281 PFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVL 360 (471)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHH
Confidence 345554444 5899999999998888888888889999999999999999988887777665 4443 3344445566
Q ss_pred HHHHHHhhhhhhhHHHHHHhhh
Q 014832 132 ILGGIATSLLFSAFESWLVAEH 153 (417)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~ 153 (417)
++.|++.+...+.. ..+..+.
T Consensus 361 ~~~g~~~~~~~~~~-~~~~~~~ 381 (471)
T PRK10504 361 FLQGMVNSTRFSSM-NTLTLKD 381 (471)
T ss_pred HHHHHHHHHHHHHH-HHHHHHc
Confidence 77888888777766 4455554
No 155
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.13 E-value=5.1e-12 Score=121.78 Aligned_cols=351 Identities=11% Similarity=0.058 Sum_probs=3.0
Q ss_pred hhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc---------
Q 014832 53 DWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP--------- 122 (417)
Q Consensus 53 ~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~--------- 122 (417)
.++....+..+.+.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-.+.++.+++++ +++-+
T Consensus 19 ~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~ 98 (539)
T PF03137_consen 19 SGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYE 98 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccc
Confidence 34555666688899999999999999999999999999999999998888888888888888776 55410
Q ss_pred -----------------------------------------hHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhh
Q 014832 123 -----------------------------------------QYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQ 161 (417)
Q Consensus 123 -----------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~ 161 (417)
-+..++++.++.|+|....++.. .+|+.|..++....-
T Consensus 99 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG-~tYiDDnv~~~~spl 177 (539)
T PF03137_consen 99 EASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLG-ITYIDDNVSKKNSPL 177 (539)
T ss_dssp -----------------------------------------------------SSS------------------------
T ss_pred cccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccce-eeeeccccccccCcc
Confidence 03677889999999999999999 779999822211111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc----------------cC----CCchhHHHHHHHHHHHHHHHH---hh
Q 014832 162 WLSITFSKAIFLGNGLVAILSGLFGNLLVDSF----------------SL----GPVAPFDAAACFLAIGMVIIL---SS 218 (417)
Q Consensus 162 ~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~----------------~~----gw~~~f~~~~~~~~~~~~~~~---~~ 218 (417)
..++.... ..+|+.+|-.+++...+.+ +. .|-.-|++.+.+.++..+... +.
T Consensus 178 ----YiGi~~~~-~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 178 ----YIGILYAM-SILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----chhhhhHH-hhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 12222222 3444444444433322211 11 244455555655555444443 22
Q ss_pred ccccCCCCC-------Cch----h---H----------HHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccc
Q 014832 219 WTENYGDPS-------ESK----D---L----------LTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL 274 (417)
Q Consensus 219 ~~~~~~~~~-------~~~----~---~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (417)
+|++++.++ +.+ + + .++..+..+++++||.+....+.... .........+|.|.|
T Consensus 253 lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~-~~~~~~G~~tF~pKy 331 (539)
T PF03137_consen 253 LPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVF-ESFIVSGFATFLPKY 331 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 333310000 000 0 0 01112345667788887777666555 344444556689999
Q ss_pred cCCCCCCChhHHH---HHH-HHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHH---HHHHhh---------ccC
Q 014832 275 SPNDEEIPHGFIF---ATF-MLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLL---PIVTSF---------LVA 338 (417)
Q Consensus 275 ~~~~~~~~~~~~~---~~~-~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~---~~~~~~---------~~~ 338 (417)
++.+++.+.+... ... ..+.++|.+++|++.+|++-+.++.+........+..+. ..+..- ...
T Consensus 332 lE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y 411 (539)
T PF03137_consen 332 LESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPY 411 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCcc
Confidence 9997766553333 222 236778999999999998766555555554444433332 111100 000
Q ss_pred ------CC------CCCC----------C----Cc-ccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccc
Q 014832 339 ------PS------NVKS----------G----GI-SFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNF 391 (417)
Q Consensus 339 ------~~------~~~~----------~----~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 391 (417)
.. +++. + .. ......+++.+++..+..+..........-+.+|+++|+-|.|+
T Consensus 412 ~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv 491 (539)
T PF03137_consen 412 HNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGV 491 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhH
Confidence 00 0000 0 00 11223444445555555555566667777899999999999999
Q ss_pred cccchhH-HHHHHHHHhcCC
Q 014832 392 FRIPLNI-FVCVVLYNVCSS 410 (417)
Q Consensus 392 ~~~~~~~-~~~~~~~~~~~~ 410 (417)
..+...+ +.+-++.++..-
T Consensus 492 ~~~~~rllg~IPgPIifG~i 511 (539)
T PF03137_consen 492 QWLIIRLLGFIPGPIIFGAI 511 (539)
T ss_dssp --------------------
T ss_pred HHHHHHhhcCcchHHHHhHH
Confidence 7765544 445555554443
No 156
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.13 E-value=6.3e-09 Score=99.83 Aligned_cols=153 Identities=12% Similarity=0.004 Sum_probs=91.9
Q ss_pred hhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhcccccccccc--CchHHH-HHHHHHHHHHHH-Hhc--CchHHHHHH
Q 014832 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ--GRKRAC-VTYCLTYILSCI-TKH--SPQYKILMI 129 (417)
Q Consensus 57 ~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~--Grr~~~-~~~~~~~~~~~~-~~~--~~~~~~l~~ 129 (417)
..++|.+. ++.|.+..+.++......++..++.++.|+++||+ +||+.. .....+..++.+ ... ..+.+...+
T Consensus 273 ~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 352 (452)
T PRK11273 273 LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMA 352 (452)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHH
Confidence 46777555 45799999999988888899999999999999999 555432 222233333333 222 334444444
Q ss_pred HHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHH
Q 014832 130 GRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (417)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~ 209 (417)
..++.|.+........ .++..|. .+.+......+.....+...+...+|.+.+.+.++. ||+..|++.+..++
T Consensus 353 ~~~~~g~~~~~~~~~~-~~~~~~~----~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~--g~~~~f~~~~~~~~ 425 (452)
T PRK11273 353 CMIVIGFLIYGPVMLI-GLHALEL----APKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF--GWDGGFMVMIGGSI 425 (452)
T ss_pred HHHHHHHHHHhHHHHH-HHHHHHH----cChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh--cchHHHHHHHHHHH
Confidence 4455554432222222 2344455 222223334444444433323345678888888888 99999998887777
Q ss_pred HHHHHHH
Q 014832 210 IGMVIIL 216 (417)
Q Consensus 210 ~~~~~~~ 216 (417)
++.+...
T Consensus 426 ~~~~~~~ 432 (452)
T PRK11273 426 LAVILLI 432 (452)
T ss_pred HHHHHHH
Confidence 6665554
No 157
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.12 E-value=2.5e-09 Score=102.24 Aligned_cols=122 Identities=16% Similarity=0.160 Sum_probs=82.8
Q ss_pred CcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC-chHHHHHHHHHHHHHHhhhhhhhHHH
Q 014832 70 GKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS-PQYKILMIGRILGGIATSLLFSAFES 147 (417)
Q Consensus 70 s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 147 (417)
++.+.+++.+...++..++.+++++++||+|+|+++..+..+.+++.+ ..+. ++.+.+.+..++.|++.+...+.. .
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLV-W 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 456677788888899999999999999999999999999888888777 5554 456777778888999988887776 5
Q ss_pred HHHhhh-cccc--hhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Q 014832 148 WLVAEH-NKRG--FEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF 193 (417)
Q Consensus 148 ~~i~~~-~~r~--~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~ 193 (417)
++++|. +.+. ...+......++.... ..+|..+++.+.+.+.+..
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFV-RKLGQALAGFLVGLILGII 381 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHc
Confidence 566665 1100 0011122233333332 4555566666666665554
No 158
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.11 E-value=1.4e-08 Score=96.84 Aligned_cols=155 Identities=15% Similarity=0.104 Sum_probs=119.0
Q ss_pred HHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCch--HHHHHHHHHHHHHHH-Hhc--------CchHHHHHHHHH
Q 014832 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK--RACVTYCLTYILSCI-TKH--------SPQYKILMIGRI 132 (417)
Q Consensus 64 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr--~~~~~~~~~~~~~~~-~~~--------~~~~~~l~~~r~ 132 (417)
.+++|++..+...+..+..+...++++++|++.||+|.| +++..+++.+.+..+ -.+ .++.+.+.+.-+
T Consensus 309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~ 388 (477)
T PF11700_consen 309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV 388 (477)
T ss_pred HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence 368999999999999899999999999999999999999 898888888766555 333 567788999999
Q ss_pred HHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHH
Q 014832 133 LGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGM 212 (417)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~ 212 (417)
+.|+..|...+.. -++.+|.-++++..+ .+++.... .-....+||.+-+.+.+.. .+-|..+....++.++.+
T Consensus 389 ~~G~~~G~~qs~s-Rs~~~~LiP~g~e~e----fFgly~i~-gk~ss~lGPll~g~i~~~t-g~~r~g~~~l~~lf~~gl 461 (477)
T PF11700_consen 389 LIGLFMGGIQSAS-RSLFSRLIPPGREAE----FFGLYAIT-GKASSWLGPLLFGLITDAT-GSQRYGFLFLLVLFLIGL 461 (477)
T ss_pred HHHHHhhhHHHHH-HHHHHHhCCCchhhH----HHHHHHHH-HHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHH
Confidence 9999999999998 468899855555433 34444444 4455577777777777665 238899888888888877
Q ss_pred HHHHhhccccCCCC
Q 014832 213 VIILSSWTENYGDP 226 (417)
Q Consensus 213 ~~~~~~~~~~~~~~ 226 (417)
++.. ..+.+++++
T Consensus 462 ~ll~-~v~~~~g~~ 474 (477)
T PF11700_consen 462 ILLF-FVDVEKGRE 474 (477)
T ss_pred HHHh-hccchhhhh
Confidence 7765 566555443
No 159
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.11 E-value=1.6e-09 Score=104.99 Aligned_cols=282 Identities=15% Similarity=0.163 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHhhhh----hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH
Q 014832 42 YLLVYSLMMAGDWLQ----GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI 117 (417)
Q Consensus 42 ~~~~~~~~~~~~~~~----~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~ 117 (417)
++.+..+..+..++. ...+..+.+.++++.++.|++.+.+-++..+...+..+..-|.-|-|.+-++.++.+++++
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsl 177 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSL 177 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHH
Confidence 333334444444443 3344466688999999999999999999999999999999999999999999999988887
Q ss_pred -HhcC--------------------c---------------------------h----HH-HHHHHHHHHHHHhhhhhhh
Q 014832 118 -TKHS--------------------P---------------------------Q----YK-ILMIGRILGGIATSLLFSA 144 (417)
Q Consensus 118 -~~~~--------------------~---------------------------~----~~-~l~~~r~l~G~~~~~~~~~ 144 (417)
+++- + + ++ .++++.++.|+|....++.
T Consensus 178 l~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl 257 (735)
T KOG3626|consen 178 LFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL 257 (735)
T ss_pred HHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC
Confidence 6652 0 0 22 5678899999999999998
Q ss_pred HHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-c--------c----CCCchhHHHHHHHHHHH
Q 014832 145 FESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS-F--------S----LGPVAPFDAAACFLAIG 211 (417)
Q Consensus 145 ~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~-~--------~----~gw~~~f~~~~~~~~~~ 211 (417)
. ..|+.|..++....-... .......+|..+|-+++.+....-.+. . + ..|..-|++.+.+.++.
T Consensus 258 G-isYiDDnvk~~~SplYlg-i~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 258 G-ISYIDDNVKKKNSPLYLG-ILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred C-CccccccccccCCcHHHH-HHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 8 679999822222222222 222333334444444444443333332 1 1 12555666777777666
Q ss_pred HHHHHhhccccCCCCC-------------------Cch---hHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHh
Q 014832 212 MVIILSSWTENYGDPS-------------------ESK---DLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFL 269 (417)
Q Consensus 212 ~~~~~~~~~~~~~~~~-------------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (417)
.+..+ ..|++.+++. +.+ +..++..+..+.+++||.+....+...+ +...+....+
T Consensus 336 a~p~f-~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~-~~~~~~G~~t 413 (735)
T KOG3626|consen 336 AVPLF-FFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVI-ESLAITGYIT 413 (735)
T ss_pred HHHHH-hCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHH-HHHHHhhHHH
Confidence 66655 4444322111 000 1122334567778888887777666544 5555556677
Q ss_pred hhccccCCCCCCChhHHH---HHHHH-HHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHH
Q 014832 270 WTPALSPNDEEIPHGFIF---ATFML-ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSL 327 (417)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~ 327 (417)
|+|.|++++++.+.+... ...++ +..+|.+++|++.+|+..+.+...........+.+
T Consensus 414 FlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l 475 (735)
T KOG3626|consen 414 FLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSL 475 (735)
T ss_pred hhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHH
Confidence 899999997777654333 23333 56788899999999987665555555444444433
No 160
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.11 E-value=8.2e-09 Score=95.91 Aligned_cols=130 Identities=15% Similarity=0.142 Sum_probs=98.9
Q ss_pred hhHHHHHHh-cCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCch-HHHHHHHHHHH
Q 014832 58 PYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQ-YKILMIGRILG 134 (417)
Q Consensus 58 ~~l~~l~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~-~~~l~~~r~l~ 134 (417)
...|.+.++ +|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+....+++.. ..+.++ .+.+.+..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 556655554 899999999999999999999999999999999999999988877777777 777764 88888899999
Q ss_pred HHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Q 014832 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF 193 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~ 193 (417)
|++.+...+.. ..++.|. .+.+.+....+..... ..++..+++.+.+.+.+..
T Consensus 312 g~~~~~~~~~~-~~~~~~~----~~~~~~g~~~~~~~~~-~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 312 GVGYGPINVPQ-GTLLQRR----VPAELLGRVFGAQFSL-SHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHH-HHHHHHh----CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHc
Confidence 99999887776 5677776 2222233344444444 5566677777777766543
No 161
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.10 E-value=1.3e-08 Score=96.05 Aligned_cols=143 Identities=15% Similarity=0.228 Sum_probs=91.9
Q ss_pred HHHHhcCCCcchHHHHHHHH-HHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-H---hcC-chHHHHHHHHHH--
Q 014832 62 YLYSTYGFGKGEIGQLFIAG-FGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-T---KHS-PQYKILMIGRIL-- 133 (417)
Q Consensus 62 ~l~~~~g~s~~~~g~~~s~~-~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~---~~~-~~~~~l~~~r~l-- 133 (417)
.+.+++|.++++.|++.+.. ..+..++.++.|++.||+|||+.+..+.....+..+ . +.. ++.+.+.+.-++
T Consensus 235 ~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 314 (402)
T PRK11902 235 FLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIEN 314 (402)
T ss_pred HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 45577999999999988654 456888999999999999999988777666555443 2 344 455655555544
Q ss_pred --HHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHH
Q 014832 134 --GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (417)
Q Consensus 134 --~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~ 211 (417)
.|++.+...+.. ..++.+. .+.+.. +..... ..++...++.+++.+.+.. ||+..|.+.++++++.
T Consensus 315 ~~~g~~~~~~~~~~-~~~~~~~----~~~~~~----~~~~~~-~~l~~~~~~~~~G~l~~~~--G~~~~f~~~~~~~~~~ 382 (402)
T PRK11902 315 LCGGMGTAAFVALL-MALCNRS----FSATQY----ALLSAL-ASVGRVYVGPTSGYLVEAY--GWPGFYLMTVVIALPG 382 (402)
T ss_pred HHHHHHHHHHHHHH-HHhcCCC----CcHHHH----HHHHHH-HHHHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHH
Confidence 444444444433 3344333 212211 111122 2344444455788888888 9999999998888777
Q ss_pred HHHHH
Q 014832 212 MVIIL 216 (417)
Q Consensus 212 ~~~~~ 216 (417)
.++.+
T Consensus 383 ~~~~~ 387 (402)
T PRK11902 383 LALLW 387 (402)
T ss_pred HHHHH
Confidence 66655
No 162
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.09 E-value=4.8e-09 Score=96.47 Aligned_cols=149 Identities=13% Similarity=0.118 Sum_probs=120.4
Q ss_pred CCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHH
Q 014832 69 FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFES 147 (417)
Q Consensus 69 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 147 (417)
.++...|.+.+...+.-.+.-.+..++.+|+|.|+.++++..+.++=.. ++++++.+.+.+.+.+.|+-.+...... .
T Consensus 256 ~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~-f 334 (412)
T PF01306_consen 256 QGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAA-F 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred cChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHH-H
Confidence 3445678899998888888888999999999999999999999999888 9999999999999999999999888877 5
Q ss_pred HHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCC
Q 014832 148 WLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYG 224 (417)
Q Consensus 148 ~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 224 (417)
-++++. ...+...+.+.++..++..++..+.+.+++.+.|+. |.+..|++.+.+.+...++..+.++++++
T Consensus 335 kYI~~~----fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~--G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 335 KYITAH----FDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI--GFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHH----S-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHh----CCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc--CcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 688887 333445556777777778888899999999999999 99999999998877777777656655443
No 163
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.09 E-value=9.5e-09 Score=92.68 Aligned_cols=155 Identities=17% Similarity=0.139 Sum_probs=110.5
Q ss_pred HHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccccc--CchHHHHH-HHHHHHHHHH-HhcCc--hHHHHHHHHHHHH
Q 014832 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ--GRKRACVT-YCLTYILSCI-TKHSP--QYKILMIGRILGG 135 (417)
Q Consensus 62 ~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~--Grr~~~~~-~~~~~~~~~~-~~~~~--~~~~l~~~r~l~G 135 (417)
.+.|+.|+|..+.++..+.+-++...+.+++|+++||+ |||....+ .++...++.. .-.++ |+++..+.-++.|
T Consensus 278 YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iG 357 (448)
T COG2271 278 YLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIG 357 (448)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHH
Confidence 56688999999999999999999999999999999996 66665544 4444444444 55555 4577777778888
Q ss_pred HHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~ 215 (417)
+..-+..-.. .....|. .+.+...+..+.....++..|..++....+++.+.+ ||...|.+..+.++++.++.
T Consensus 358 f~IyGPqmLi-Gl~a~e~----~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~--gW~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 358 FLIYGPQMLI-GLAAAEF----VPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW--GWDGGFIVLSIAALLAILLL 430 (448)
T ss_pred HHHhhHHHHH-HHHHhcc----ccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC--CCcchHHHHHHHHHHHHHHH
Confidence 7654432222 3334555 222234445566666667778888888888888887 99999999888888777777
Q ss_pred HhhccccC
Q 014832 216 LSSWTENY 223 (417)
Q Consensus 216 ~~~~~~~~ 223 (417)
.+.+..++
T Consensus 431 ~~~~~~~~ 438 (448)
T COG2271 431 LPVWNAEE 438 (448)
T ss_pred HHHHhhcc
Confidence 65665443
No 164
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.09 E-value=2.1e-08 Score=94.86 Aligned_cols=142 Identities=13% Similarity=-0.024 Sum_probs=92.5
Q ss_pred hHHHH-HHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hhc-----CchHHHHHHHH
Q 014832 59 YVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKH-----SPQYKILMIGR 131 (417)
Q Consensus 59 ~l~~l-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~-----~~~~~~l~~~r 131 (417)
..|.+ .+++|.++.+.++......++..++.++.|+++||+|+|+.+..+.+...++.+ ... .++.+.+.+..
T Consensus 237 ~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK15402 237 LSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGL 316 (406)
T ss_pred HhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHH
Confidence 34543 467899999999888878888899999999999999999999888877766655 443 23566677888
Q ss_pred HHHHHHhhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHH
Q 014832 132 ILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (417)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~ 209 (417)
++.|++.+...+.. ....... +++++. ....+.. ..++..+++.+.+.+.+.. ++.......++..+
T Consensus 317 ~~~g~g~~~~~~~~-~~~~~~~~~~~~g~~----~~~~~~~----~~~~~~~g~~~~~~l~~~~--~~~~~~~~~~~~~~ 385 (406)
T PRK15402 317 SLYAFGIGLANAGL-YRLTLFSSDVSKGTV----SAAMGML----SMLIFTVGIELSKHAYLGG--GNGLFNLFNLANGL 385 (406)
T ss_pred HHHHHHHHHHhhhH-HHHHhhhccccccHH----HHHHHHH----HHHHHHHHHHHHHhcccCC--chHHHHHHHHHHHH
Confidence 89999988776654 2232222 334432 2222333 3344456666666666554 55554444443433
Q ss_pred HH
Q 014832 210 IG 211 (417)
Q Consensus 210 ~~ 211 (417)
+.
T Consensus 386 ~~ 387 (406)
T PRK15402 386 LW 387 (406)
T ss_pred HH
Confidence 33
No 165
>PRK10054 putative transporter; Provisional
Probab=99.08 E-value=8.1e-09 Score=97.17 Aligned_cols=148 Identities=11% Similarity=0.141 Sum_probs=107.5
Q ss_pred HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC-chHHHHHHHHHHHHHHhhhhh
Q 014832 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS-PQYKILMIGRILGGIATSLLF 142 (417)
Q Consensus 65 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~-~~~~~l~~~r~l~G~~~~~~~ 142 (417)
++.+.+....+.+.+...+.....+++.|++.||+++|+.+..+..+..++.. ..+. ++.+.+++..++.|++.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 45566677778888888888888888999999999999999999888888877 6654 577777788899999988777
Q ss_pred hhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccc
Q 014832 143 SAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTE 221 (417)
Q Consensus 143 ~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 221 (417)
|.. ..++.+..+++...+. ++. ... ..+|..++|.+++.+.++. |....|++.+...++..++..+..+|
T Consensus 317 p~~-~~~~~~~~p~~~~~~~----~~~-~~~-~~~G~~~Gp~~~G~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (395)
T PRK10054 317 PGE-YMLIDHIAPPGMKASY----FSA-QSL-GWLGAAINPLVSGVILTTL--PPWSLFVILALAIVAAWLLMLKGMRA 386 (395)
T ss_pred hhH-HHHHHHhCCcccceeh----HhH-HHH-HHHHHHHHHHHHHHHHHHc--ChhhHHHHHHHHHHHHHHHHHhcccc
Confidence 766 5567666332222221 221 122 4467788888999999888 88888888777766666665544443
No 166
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.08 E-value=6.1e-07 Score=83.71 Aligned_cols=351 Identities=17% Similarity=0.060 Sum_probs=180.4
Q ss_pred chhHHHHHHHHHHHHhhhhhhhHHHHHHhc-CCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHH
Q 014832 38 FKNNYLLVYSLMMAGDWLQGPYVYYLYSTY-GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (417)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~ 116 (417)
..+.++...++....+-+-....|.+..+. .-+---.+...-.-.+...+.++..|.+.||..|+++...+.+.--++.
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV 82 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence 345555556666666655544444333333 3233333444444557778888999999999999998877755332221
Q ss_pred H-------HhcC--c-----h--HHHHHHHHHHHHHHhhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHH
Q 014832 117 I-------TKHS--P-----Q--YKILMIGRILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLV 178 (417)
Q Consensus 117 ~-------~~~~--~-----~--~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g 178 (417)
. ..+. + + ...+++.-.+.|.-.-........+.=.|| .--+.........+...--+ -.+.
T Consensus 83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRI-DL~c 161 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRI-DLFC 161 (432)
T ss_pred HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHH-HHHH
Confidence 1 1111 1 1 112222222222222221111101111223 00011122233344444444 5666
Q ss_pred HHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHH-------hhccc---cCCCC--CCchh------------HHH
Q 014832 179 AILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL-------SSWTE---NYGDP--SESKD------------LLT 234 (417)
Q Consensus 179 ~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~-------~~~~~---~~~~~--~~~~~------------~~~ 234 (417)
-+++|++.+.+.+.. +.+....+.+...++..++=+ ...|+ +++++ ++.++ ..+
T Consensus 162 kllaPl~vG~l~t~~--s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (432)
T PF06963_consen 162 KLLAPLFVGLLMTFA--SPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILK 239 (432)
T ss_pred HHHHHHHHHHHhhcc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHH
Confidence 688888888888766 777777766666665555432 11121 11111 00000 011
Q ss_pred HHH-------hHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCC-ChhHHHHHHHHHHHHHHHHHHHHH
Q 014832 235 QFR-------GAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEI-PHGFIFATFMLASMLGSSLASRLM 305 (417)
Q Consensus 235 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~ 305 (417)
+.. ++++..++++ .+...+...+.......+-. .+..|+.+ +.+. ..|..-+...+.++.+++...++.
T Consensus 240 ~~~~~~~~~~~~w~~Y~~q~-vflas~alalLY~TVLsf~~-lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~ 317 (432)
T PF06963_consen 240 RLWNPLRTIIRGWRTYFRQP-VFLASFALALLYFTVLSFGG-LMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLM 317 (432)
T ss_pred HHHHHHHHHhccHHHHHhCH-HHHHHHHHHHHHHHHhcCcH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 2334444443 44444554444443322222 24445554 3322 235555677788999999999999
Q ss_pred hhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCC-cccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCccc
Q 014832 306 ARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGG-ISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA 384 (417)
Q Consensus 306 dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~ 384 (417)
+|+|.. |.-..+......++.+....-... +++ ...+...++.+.++.-+|.=..-....-+++|.+|+++
T Consensus 318 ~riGlv--r~G~~~l~~q~~~L~~~v~~~~~~------~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~ 389 (432)
T PF06963_consen 318 KRIGLV--RAGLWSLWWQWVCLALCVVSFWAP------GSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE 389 (432)
T ss_pred HHhcch--hhHHHHHHHHHHHHHHHHHHHhcC------CCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH
Confidence 999977 666666665444433322221110 111 12244555566666666665555777889999999999
Q ss_pred ccccccccccchhHHHH
Q 014832 385 RSTIMNFFRIPLNIFVC 401 (417)
Q Consensus 385 r~~~~g~~~~~~~~~~~ 401 (417)
||+..|.-+...|+.-.
T Consensus 390 Rg~v~gvq~sl~~lf~l 406 (432)
T PF06963_consen 390 RGAVSGVQNSLQSLFEL 406 (432)
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 99998876665555433
No 167
>PRK15075 citrate-proton symporter; Provisional
Probab=99.08 E-value=1.2e-08 Score=97.40 Aligned_cols=132 Identities=15% Similarity=0.161 Sum_probs=86.7
Q ss_pred hhhHHHHHH-hcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH--H---hcCchHHHHHHH
Q 014832 57 GPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI--T---KHSPQYKILMIG 130 (417)
Q Consensus 57 ~~~l~~l~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~--~---~~~~~~~~l~~~ 130 (417)
..+.|.+.+ ++|.+..+.++......++..++.++.|+++||+|||+++..+.....+... . ...++.......
T Consensus 258 ~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (434)
T PRK15075 258 TVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAV 337 (434)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Confidence 456776554 4899999999888888899999999999999999999998876544332211 1 123344444444
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCc
Q 014832 131 RILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPV 198 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~ 198 (417)
.++.+++.+...+.. ..++.|. +.|+. ..+.....+..++..++|.+.+.+.+.. |++
T Consensus 338 ~~~~~~~~g~~~~~~-~~~~~e~~p~~~rg~-------~~g~~~~~~~~~~g~~~p~~~g~i~~~~--g~~ 398 (434)
T PRK15075 338 ELWLSFLYGSYNGAM-VVALTEVMPAEVRTA-------GFSLAYSLATAIFGGFTPAISTWLIHVT--GDK 398 (434)
T ss_pred HHHHHHHHHHHHhhH-HHHHHHHCCCCccch-------heeHHHHHHHHHHhhhHHHHHHHHHHhc--CCc
Confidence 556666666655544 4567776 33333 3334444444444566788888888877 654
No 168
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.08 E-value=8.2e-09 Score=99.93 Aligned_cols=161 Identities=16% Similarity=0.133 Sum_probs=101.7
Q ss_pred hhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC--ch-H-HHHHHHHH
Q 014832 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS--PQ-Y-KILMIGRI 132 (417)
Q Consensus 58 ~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~--~~-~-~~l~~~r~ 132 (417)
.+.|.+.++.|.+..+.++......+...++.++.|+++||+|||+.++.+.++.+++.+ .... .+ . .......+
T Consensus 292 ~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~ 371 (479)
T PRK10077 292 YYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSML 371 (479)
T ss_pred HHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 355777788999887777777777788889999999999999999999999988888776 5432 12 1 12223334
Q ss_pred HHHHHhhhhh-hhHHHHHHhhhcccchhhhHHHHHHHHHH---HHHHHHHHHHHhhhh--hhhhhhccCCCchhHHHHHH
Q 014832 133 LGGIATSLLF-SAFESWLVAEHNKRGFEQQWLSITFSKAI---FLGNGLVAILSGLFG--NLLVDSFSLGPVAPFDAAAC 206 (417)
Q Consensus 133 l~G~~~~~~~-~~~~~~~i~~~~~r~~~~~~~~~~~~~~~---~~g~~~g~~l~~~~~--~~~~~~~~~gw~~~f~~~~~ 206 (417)
+.+.+.+... +.. ..++.|. .+.+.+....+... .+|..+++.+.|.+. +++.+.. +|+..|++.++
T Consensus 372 ~~~~~~~~~~~~~~-~~~~~e~----~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~ 444 (479)
T PRK10077 372 FYVAAFAMSWGPVC-WVLLSEI----FPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHF--HNGFSYWIYGC 444 (479)
T ss_pred HHHHHHhccccchh-HHHhHhh----CChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhc--cCccHHHHHHH
Confidence 4444444322 344 5677777 11222222333322 233444444445444 3444556 89999999888
Q ss_pred HHHHHHHHHHhhccccCCC
Q 014832 207 FLAIGMVIILSSWTENYGD 225 (417)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~ 225 (417)
..++..++.+...||++++
T Consensus 445 ~~~~~~~~~~~~~~e~~~~ 463 (479)
T PRK10077 445 MGVLAALFMWKFVPETKGK 463 (479)
T ss_pred HHHHHHHHHHhccccCCCC
Confidence 7777777666566766543
No 169
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.07 E-value=4e-09 Score=101.81 Aligned_cols=159 Identities=14% Similarity=0.057 Sum_probs=106.9
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hhc-----Cc------hH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKH-----SP------QY 124 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~-----~~------~~ 124 (417)
..+.|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+..+.++.+++.+ ..+ .+ +.
T Consensus 304 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (481)
T TIGR00879 304 MYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGN 383 (481)
T ss_pred HHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Confidence 4556677788999998888888888999999999999999999999999998887777766 541 11 22
Q ss_pred HHHHHHHHHHHHHhhh-hhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHH
Q 014832 125 KILMIGRILGGIATSL-LFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDA 203 (417)
Q Consensus 125 ~~l~~~r~l~G~~~~~-~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~ 203 (417)
..+....+ .+.+.+. ..+.. ..++.|. .+.+.+....+..... ..+|..+++.+.+.+.++. +|++.|++
T Consensus 384 ~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~----~p~~~~~~~~~~~~~~-~~lg~~i~~~~~~~~~~~~--~~~~~f~~ 454 (481)
T TIGR00879 384 VAIVFILL-FIAFFAMGWGPVP-WVIVSEI----FPLSLRPKGISIAVAA-NWLANFIVGFLFPTMLESI--GVGGVFIF 454 (481)
T ss_pred HHHHHHHH-HHHHHHccccCee-hhhhhcc----CChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhc--Cccceehh
Confidence 22222222 2222222 22333 4455676 2222233344444444 5667778888888877777 99999999
Q ss_pred HHHHHHHHHHHHHhhccccCC
Q 014832 204 AACFLAIGMVIILSSWTENYG 224 (417)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~ 224 (417)
.++++++..+......||+++
T Consensus 455 ~~~~~~~~~i~~~~~~~~~~~ 475 (481)
T TIGR00879 455 FGGLNVLGLIFVYFFLPETKG 475 (481)
T ss_pred HHHHHHHHHHHHheecccCCC
Confidence 888877777766645566543
No 170
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.07 E-value=2.9e-08 Score=94.75 Aligned_cols=159 Identities=13% Similarity=-0.036 Sum_probs=96.9
Q ss_pred hhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhcccccccccc--CchHHH-HH---HHHHHHHHHHHhcCchHHHHHH
Q 014832 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ--GRKRAC-VT---YCLTYILSCITKHSPQYKILMI 129 (417)
Q Consensus 57 ~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~--Grr~~~-~~---~~~~~~~~~~~~~~~~~~~l~~ 129 (417)
...+|.+. +++|.+..+.+...+...++..++.++.|+++||+ ++|+.. .. +.....++.......+......
T Consensus 263 ~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (434)
T PRK11663 263 NDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAA 342 (434)
T ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHH
Confidence 34566555 67899999999999999999999999999999999 333322 22 1121222222111233333333
Q ss_pred HHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHH
Q 014832 130 GRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLA 209 (417)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~ 209 (417)
..+..|++........ .....|. ...+......+..... ..+|..++|.+.+.+.+.. ||+..|+..++..+
T Consensus 343 ~~~~~g~~~~~~~~~~-~~~~~~~----~~~~~~g~~~g~~~~~-~~~g~~~~p~~~g~l~~~~--g~~~~f~~~~~~~~ 414 (434)
T PRK11663 343 CFFTIGFFVFGPQMLI-GMAAAEC----SHKEAAGAATGFVGLF-AYLGAALSGYPLAKVLEIW--HWTGFFVVISIAAG 414 (434)
T ss_pred HHHHHHHHHhhHHHHH-HHHHHhc----ccHhhHHhHHHHHHHH-HHHHHHHhcccHHHHHHhc--ccHHHHHHHHHHHH
Confidence 3344444322211122 2345554 2233344455556555 6677788888888888887 99999999988877
Q ss_pred HHHHHHHhhccccC
Q 014832 210 IGMVIILSSWTENY 223 (417)
Q Consensus 210 ~~~~~~~~~~~~~~ 223 (417)
+..+..++..++++
T Consensus 415 ~~~~~~~~~~~~~~ 428 (434)
T PRK11663 415 ISALLLLPFLNAQA 428 (434)
T ss_pred HHHHHHHHHHhhhc
Confidence 77666554444433
No 171
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.07 E-value=3.3e-08 Score=93.04 Aligned_cols=143 Identities=13% Similarity=0.120 Sum_probs=99.4
Q ss_pred HHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHH-HHHHHH-HhcCchHHHHHHHHHHHHHHh
Q 014832 61 YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT-YILSCI-TKHSPQYKILMIGRILGGIAT 138 (417)
Q Consensus 61 ~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~-~~~~~~-~~~~~~~~~l~~~r~l~G~~~ 138 (417)
|.+.+++|.++.+.+.+.....++..++.++.|++.||.+ |+.+..+..+ .....+ ....++.+.+.+..++.|++.
T Consensus 241 p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~ 319 (394)
T PRK10213 241 PVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTF 319 (394)
T ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 5566788999999999999999999999999999999964 4444444444 333344 555667788888889999998
Q ss_pred hhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHH
Q 014832 139 SLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (417)
Q Consensus 139 ~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~ 215 (417)
+...+.. .+++.+. +++++ ..+..... ..+|..+++.+++.+.+.. |++..+...+...++..+..
T Consensus 320 ~~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~-~~lg~~~G~~l~G~l~~~~--g~~~~~~~~~~~~~~~~~~~ 387 (394)
T PRK10213 320 ALVPVGW-STWITRSLADQAEK-------AGSIQVAV-IQLANTCGAAIGGYALDNI--GLTSPLMLSGTLMLLTALLV 387 (394)
T ss_pred HhhhHHH-HHHHHHHCcccHHH-------HHHHHHHH-HHHHHHHHHHHHHHHHhcc--ChhhHHHHHHHHHHHHHHHH
Confidence 8877766 5556554 11121 11111222 4566678888888888877 89998888876655554443
No 172
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.06 E-value=2.2e-08 Score=95.53 Aligned_cols=153 Identities=18% Similarity=0.129 Sum_probs=89.6
Q ss_pred hhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hh----cCchHHHHHHH
Q 014832 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TK----HSPQYKILMIG 130 (417)
Q Consensus 57 ~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~----~~~~~~~l~~~ 130 (417)
..++|.+. +++|.+..+.+...++..+...+++++.|+++||+|||+.+..+.++.++... .. ..++....+..
T Consensus 263 ~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGL 342 (432)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 45677544 66899998999888888888889999999999999999988776554433322 21 12233322222
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHH
Q 014832 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAI 210 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~ 210 (417)
-.+.++..+...+.. ..+.+|. .+.+.+....++....|..+.....|.+.+.+ +.. ..|...++..++..++
T Consensus 343 ~~~~~~~~~~~~~~~-~~~~~e~----fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~-g~~~~~~~~~~~~~~i 415 (432)
T PRK10406 343 VMCALLIVSFYTSIS-GILKAEM----FPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSI-GMETAFFWYVTLMAVV 415 (432)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHH----CCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHh-CCCcHHHHHHHHHHHH
Confidence 222223333333333 4567787 22233333555555555554344466666644 333 1355566666555555
Q ss_pred HHHHHH
Q 014832 211 GMVIIL 216 (417)
Q Consensus 211 ~~~~~~ 216 (417)
..+..+
T Consensus 416 ~~~~~~ 421 (432)
T PRK10406 416 AFLVSL 421 (432)
T ss_pred HHHHHH
Confidence 555444
No 173
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.05 E-value=2.8e-08 Score=93.54 Aligned_cols=81 Identities=20% Similarity=0.193 Sum_probs=63.1
Q ss_pred HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhh
Q 014832 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLL 141 (417)
Q Consensus 63 l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~ 141 (417)
+.+++|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+..+..++.+ ..+.++.+.....-.+.+.+.+..
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 309 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVG 309 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4467899999999999999999999999999999999999999999888888877 776666554444444444444443
Q ss_pred hh
Q 014832 142 FS 143 (417)
Q Consensus 142 ~~ 143 (417)
.+
T Consensus 310 ~~ 311 (392)
T PRK10473 310 FG 311 (392)
T ss_pred hH
Confidence 33
No 174
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.05 E-value=6.9e-09 Score=100.90 Aligned_cols=142 Identities=12% Similarity=0.093 Sum_probs=95.7
Q ss_pred hhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC--chHHHHHHHHHH
Q 014832 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS--PQYKILMIGRIL 133 (417)
Q Consensus 58 ~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~--~~~~~l~~~r~l 133 (417)
.++|.+. +++|.++.+.+++.+...++..++.++.|+++||+|||+++..+..+..+..+ .... .+.+.+....++
T Consensus 296 ~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (496)
T PRK03893 296 ALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFF 375 (496)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHH
Confidence 4567555 58999999999999999999999999999999999999999888776666555 3332 334444444454
Q ss_pred HHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHH
Q 014832 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~ 207 (417)
.+.......+.. +.++.|. .+.+.....+++.... ..+|..++|.+++.+.+.+ ||+..+...+..
T Consensus 376 ~~~~~~~~~~~~-~~~~~~~----~~~~~~g~~~~~~~~~-~~~g~~lgp~l~g~l~~~~--g~~~~~~~~~~~ 441 (496)
T PRK03893 376 QQMLGQGISGLL-PKLIGGY----FDTEQRAAGLGFTYNV-GALGGALAPILGALIAQRL--DLGTALASLSFS 441 (496)
T ss_pred HHHHhcccchhh-HHHHHhh----CCHHHhhcccchhhhh-hhHHHHHHHHHHHHHhccC--ChHHHHHHHHHH
Confidence 443333333444 5566666 1122222344444444 4566678888888888877 888887665543
No 175
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.05 E-value=2.1e-08 Score=93.09 Aligned_cols=131 Identities=13% Similarity=0.088 Sum_probs=89.8
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccccc-CchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILG 134 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~ 134 (417)
..++|.+.++.|.|..+.+.+.+...++..+++++.|++.||+ +||+.+..+..+.+++.+ ..+.++.+... .-++.
T Consensus 217 ~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 295 (355)
T TIGR00896 217 IGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVL 295 (355)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHH
Confidence 4567777778899999999999999999999999999999999 567777777777777777 66655433322 45678
Q ss_pred HHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Q 014832 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF 193 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~ 193 (417)
|++.+...+.. ...+.+...+ .+......+....+ ..++..++|.+.+.+.++.
T Consensus 296 g~~~g~~~~~~-~~~~~~~~~~---~~~~g~~~~~~~~~-~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 296 GLGQGGAFPLA-LTLIGLRSRQ---AAQAAALSAMAQSI-GYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred HHhhhhHhHHH-HHHHHHhccC---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 99988887775 3344432111 11112233333333 3445567788888877765
No 176
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.05 E-value=1.4e-08 Score=95.32 Aligned_cols=151 Identities=15% Similarity=-0.004 Sum_probs=97.5
Q ss_pred hhhHHHH-HHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchH--HH------HHHHHHHHHHHH-HhcCchHHH
Q 014832 57 GPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKR--AC------VTYCLTYILSCI-TKHSPQYKI 126 (417)
Q Consensus 57 ~~~l~~l-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~--~~------~~~~~~~~~~~~-~~~~~~~~~ 126 (417)
..+.|.. .+++|.++.+.+++.+...++..++.++.|+++||+|||+ .. ..+.....+... ....++.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (399)
T TIGR00893 235 LTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYA 314 (399)
T ss_pred HHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 4556644 4678999999999999999999999999999999999996 11 111111222222 222334444
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCC-CchhHHHHH
Q 014832 127 LMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG-PVAPFDAAA 205 (417)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~g-w~~~f~~~~ 205 (417)
......+.+.+.+ ..+.. ..++.|. .+.+.+....+..... ..+|..++|.+.+.+.+.. | |+..|.+.+
T Consensus 315 ~~~~~~~~~~~~~-~~~~~-~~~~~~~----~~~~~~g~~~~~~~~~-~~~g~~~~~~i~g~l~~~~--g~~~~~~~~~~ 385 (399)
T TIGR00893 315 ALALVALGFFGLG-AGAIG-WALISDN----APGNIAGLTGGLINSL-GNLGGIVGPIVIGAIAATT--GSFAGALMVVA 385 (399)
T ss_pred HHHHHHHHHhchh-hhhHH-HHHHHhh----cChhHHHHHHHHHHHH-HHHhhhhhhHHhhhhccCC--CchhHHHHHHH
Confidence 4444444444444 45655 5677777 2222233345555555 5677788888888888776 7 999998888
Q ss_pred HHHHHHHHHHH
Q 014832 206 CFLAIGMVIIL 216 (417)
Q Consensus 206 ~~~~~~~~~~~ 216 (417)
+..++..+...
T Consensus 386 ~~~~~~~~~~~ 396 (399)
T TIGR00893 386 ALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHH
Confidence 77766655543
No 177
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.03 E-value=8.4e-09 Score=97.40 Aligned_cols=138 Identities=17% Similarity=0.223 Sum_probs=99.0
Q ss_pred hhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH--HhcCchHHHHHHHHHHH
Q 014832 58 PYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI--TKHSPQYKILMIGRILG 134 (417)
Q Consensus 58 ~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~--~~~~~~~~~l~~~r~l~ 134 (417)
...| .+.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+..+.....+..+ ....++.+.+.+..++.
T Consensus 259 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (405)
T TIGR00891 259 DLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQ 338 (405)
T ss_pred hhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 3445 34467899999999999999999999999999999999999999888776543333 44456667777776777
Q ss_pred HHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCC-CchhHHH
Q 014832 135 GIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG-PVAPFDA 203 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~g-w~~~f~~ 203 (417)
|+..+...+.. +.++.|. .+.+.+....+..... ..+|..++|.+.+.+.+.. | |+..+..
T Consensus 339 ~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~g~~~~~-~~~g~~~g~~~~g~l~~~~--g~~~~~~~~ 400 (405)
T TIGR00891 339 QMLVQGIWGIL-PKHLGEY----FPTDQRAAGLGFTYQL-GNLGGALAPIIGALLAQRL--DEYGTALAS 400 (405)
T ss_pred HHHHccchhhH-HHHHhhh----CCcchhHHHhhHHHHH-HHHHHHHHHHHHHHHHHhc--cccchhHHh
Confidence 77666665665 5677776 2222233345555555 5667788888888888877 7 7766554
No 178
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.02 E-value=1.9e-08 Score=90.78 Aligned_cols=148 Identities=15% Similarity=0.179 Sum_probs=102.3
Q ss_pred hhhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc-------hH---
Q 014832 57 GPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP-------QY--- 124 (417)
Q Consensus 57 ~~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~-------~~--- 124 (417)
...+| .+.+++|.++.+.|.....+.+...+..+.+|+++||+|.+|++.......+++.. ..... +.
T Consensus 238 s~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~ 317 (417)
T COG2223 238 SAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVF 317 (417)
T ss_pred HHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHH
Confidence 56666 45579999999999999999999999999999999999999999998888888777 55543 33
Q ss_pred -HHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHH
Q 014832 125 -KILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDA 203 (417)
Q Consensus 125 -~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~ 203 (417)
..++...+..|+|.|..+-.. + .. + .+......++.... ..+|+..-|..-+...+.. .++...|++
T Consensus 318 ~~~~l~l~~~~G~GnGsvfk~I-p----~i----f-~~~~G~v~G~vga~-G~lGGf~lp~~~g~~~~~t-g~~~~~f~~ 385 (417)
T COG2223 318 VAVFLALFVFAGLGNGSVFKMI-P----VI----F-PKETGAVTGIVGAI-GGLGGFFLPLAFGVSLDLT-GSYTGAFML 385 (417)
T ss_pred HHHHHHHHHHhccCcchheeec-h----HH----H-HhhhhHHHHHHHHh-ccccccchhHHHHHHHHhc-ccHHHHHHH
Confidence 334555666777766654433 3 32 1 11223234444444 4455555555555555554 248889999
Q ss_pred HHHHHHHHHHHHH
Q 014832 204 AACFLAIGMVIIL 216 (417)
Q Consensus 204 ~~~~~~~~~~~~~ 216 (417)
.....+++.++.+
T Consensus 386 ~~~~~~~a~v~~~ 398 (417)
T COG2223 386 LLAFYLVALVLTW 398 (417)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888777665
No 179
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.02 E-value=7.6e-08 Score=89.97 Aligned_cols=167 Identities=17% Similarity=0.232 Sum_probs=116.1
Q ss_pred HHHHHhhhhhhhHHHHHHhcC-CCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC-chH
Q 014832 48 LMMAGDWLQGPYVYYLYSTYG-FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS-PQY 124 (417)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~g-~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~-~~~ 124 (417)
+..........+.+...+|.| .+....|.+.++..+.=.+.-...+++..|+|.|+++.++.+.+++=.. .+.. ++.
T Consensus 218 l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~ 297 (400)
T PF03825_consen 218 LIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPW 297 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 334344444556655567777 6777788877777777777777899999999999999999999888777 6666 554
Q ss_pred HHHHH----HHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCc--
Q 014832 125 KILMI----GRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPV-- 198 (417)
Q Consensus 125 ~~l~~----~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~-- 198 (417)
+...+ ...++|+..+..+.+. ..++.+. .+.+...+..++......++|..++..+++++.+++ |-+
T Consensus 298 ~~~~~~~~l~q~lhG~tf~~~~~a~-~~yi~~~----~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~--g~~~~ 370 (400)
T PF03825_consen 298 PFIVALQLLGQLLHGLTFGLFHAAS-VRYIDRI----APPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAF--GARGM 370 (400)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHH-HHHHHHh----CCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh--cchhh
Confidence 44333 3456999999988888 6688877 333344456666666667888899999999998877 544
Q ss_pred ----hhHHHHHHHHHHHHHHHHhhccc
Q 014832 199 ----APFDAAACFLAIGMVIILSSWTE 221 (417)
Q Consensus 199 ----~~f~~~~~~~~~~~~~~~~~~~~ 221 (417)
..+.+.+++.++..++.....+|
T Consensus 371 ~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 371 FDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 34455555444444444433333
No 180
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.00 E-value=1.2e-08 Score=98.30 Aligned_cols=149 Identities=14% Similarity=0.050 Sum_probs=90.5
Q ss_pred hhHHH-HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCch-------HHHHHHHHHHHHHHH-HhcCchHHHHH
Q 014832 58 PYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK-------RACVTYCLTYILSCI-TKHSPQYKILM 128 (417)
Q Consensus 58 ~~l~~-l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr-------~~~~~~~~~~~~~~~-~~~~~~~~~l~ 128 (417)
..+|. +.+++|.+..+.+.+.+...++..+++++.|+++||+||| ........+.++..+ ....++.+...
T Consensus 273 ~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 352 (476)
T PLN00028 273 NIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAI 352 (476)
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 34554 4567899999999999999999999999999999999875 233333334444444 55566666555
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHH
Q 014832 129 IGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (417)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~ 208 (417)
+.-++.+++.+...+.. ..++.+..+| ......++.... ..+|+.+++.+.+. .+.. +|+..|++.+++.
T Consensus 353 ~~~~l~~~~~~~~~~~~-~~~~~~~~~~-----~~g~~~g~~~~~-g~lg~~i~~~l~~~-~~~~--~y~~~f~~~~~~~ 422 (476)
T PLN00028 353 VVMILFSIFVQAACGAT-FGIVPFVSRR-----SLGVISGLTGAG-GNVGAVLTQLLFFT-GSSY--STETGISLMGVMI 422 (476)
T ss_pred HHHHHHHHHHHHhhhhh-cccCcccChh-----hchhhhhhhhcc-ccHHHHHHHHHHHh-cCCc--cHhhHHHHHHHHH
Confidence 55566666654443433 3344444111 122233333332 44555555554321 1122 6899999988777
Q ss_pred HHHHHHHH
Q 014832 209 AIGMVIIL 216 (417)
Q Consensus 209 ~~~~~~~~ 216 (417)
+++.++.+
T Consensus 423 ~i~~~~~~ 430 (476)
T PLN00028 423 IACTLPVA 430 (476)
T ss_pred HHHHHHHH
Confidence 77666655
No 181
>PRK09848 glucuronide transporter; Provisional
Probab=98.98 E-value=2.9e-08 Score=95.22 Aligned_cols=88 Identities=8% Similarity=0.055 Sum_probs=67.1
Q ss_pred HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc--hHHHHHHHHHHHHHHhhhh
Q 014832 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP--QYKILMIGRILGGIATSLL 141 (417)
Q Consensus 65 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~--~~~~l~~~r~l~G~~~~~~ 141 (417)
+.+|.++...++......++..++.++.+++.||+|+|+++.++.++..++.+ ..+.+ +.+.+.+..++.|+|.+..
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~ 336 (448)
T PRK09848 257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVT 336 (448)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH
Confidence 45676655444444445677888999999999999999999999988888777 65543 5677777788899999888
Q ss_pred hhhHHHHHHhhh
Q 014832 142 FSAFESWLVAEH 153 (417)
Q Consensus 142 ~~~~~~~~i~~~ 153 (417)
.+.. .++.+|.
T Consensus 337 ~~~~-~al~~~~ 347 (448)
T PRK09848 337 MTVM-WALEADT 347 (448)
T ss_pred HHHH-HHHHHHh
Confidence 8776 5566665
No 182
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.97 E-value=8.5e-08 Score=86.86 Aligned_cols=129 Identities=14% Similarity=0.131 Sum_probs=93.9
Q ss_pred hcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhh
Q 014832 66 TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSA 144 (417)
Q Consensus 66 ~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~ 144 (417)
++|+++.+.+...+.+..+..++.+..+++.||+|+||.+.++..+..++.+ ....++...+ ..-.+.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHH
Confidence 3699999999999999999999999999999999999999888887777766 5555544333 3556889999999998
Q ss_pred HHHHHHhhh-cc-cchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHH
Q 014832 145 FESWLVAEH-NK-RGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACF 207 (417)
Q Consensus 145 ~~~~~i~~~-~~-r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~ 207 (417)
. .+...+. .+ .+. ..++ ... ..+|..+.|.+.+.+.|.. |.+..|++..+.
T Consensus 251 ~-~s~a~~~~~~~~~~-------asai-~~~-~~~Gg~i~P~l~G~lad~~--g~~~a~~v~~~~ 303 (310)
T TIGR01272 251 I-FSLALNALGRHTSQ-------GSGI-LCL-AIVGGAIVPLLQGSLADCL--GIQLAFALPVPC 303 (310)
T ss_pred H-HHHHHhhhhhhhhh-------hHHH-HHH-HHhcchHHHHHHHHHHHhc--cchHHHHHHHHH
Confidence 7 4444443 11 111 1112 223 4567788888888888877 888888754433
No 183
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.96 E-value=4.1e-08 Score=93.56 Aligned_cols=136 Identities=18% Similarity=0.123 Sum_probs=87.1
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
...+|.+.++.|.++.+.+...+...++..+++++.|++.||+|||+.+..+.+...+..+ ....++.......-++.|
T Consensus 251 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (426)
T PRK12307 251 FGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFG 330 (426)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHH
Confidence 3456666677899999999999999999999999999999999999999888877666555 433222111222223333
Q ss_pred HHh--hhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchh
Q 014832 136 IAT--SLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAP 200 (417)
Q Consensus 136 ~~~--~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~ 200 (417)
++. ....+.. +.++.|. .+.+.+....+..... ..++..++|.+.+.+.+.. |+...
T Consensus 331 ~~~~~~~~~~~~-~~~~~~~----~p~~~~g~~~g~~~~~-~~~~~~~gp~~~g~l~~~~--g~~~~ 389 (426)
T PRK12307 331 LMATNVGVGGLV-PKFLYDY----FPLEVRGLGTGLIYNL-AATSGTFNSMAATWLGITM--GLGAA 389 (426)
T ss_pred HHHhcccHhHHH-HHHHHHh----CcHHHHhhhhhHHHHH-HhHHHHHHHHHHHHHHHcc--cHHHH
Confidence 322 2222333 4456665 2233333345555555 4556678888888887766 65443
No 184
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.95 E-value=1.2e-07 Score=88.91 Aligned_cols=121 Identities=17% Similarity=0.152 Sum_probs=83.1
Q ss_pred hhHHHH-HHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC-----chHHHHHHH
Q 014832 58 PYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS-----PQYKILMIG 130 (417)
Q Consensus 58 ~~l~~l-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~-----~~~~~l~~~ 130 (417)
...|.. .+++|.++.+.+.+.+...++..+++++.|++.||+|||+.+..+.....++.+ .... ++.+.+...
T Consensus 227 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (385)
T TIGR00710 227 SGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGP 306 (385)
T ss_pred HcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 344533 458899999999999999999999999999999999999999888777776655 4432 234455566
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 014832 131 RILGGIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFG 186 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~ 186 (417)
.++.|++.+...+.. .....|. ++++. ..+.........+.+.++.++
T Consensus 307 ~~~~g~~~~~~~~~~-~~~~~~~~~~~~g~-------~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 307 MMFVGIGNSMISSIA-MAYALEDFPHVAGT-------ASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHHH-HHHHhccCcccchH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 778888888777766 4455554 22222 333333443445555555554
No 185
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.94 E-value=6.3e-08 Score=92.56 Aligned_cols=157 Identities=11% Similarity=-0.024 Sum_probs=93.3
Q ss_pred hhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHH---HHHHH-Hhc--CchHHHHHH
Q 014832 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY---ILSCI-TKH--SPQYKILMI 129 (417)
Q Consensus 57 ~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~---~~~~~-~~~--~~~~~~l~~ 129 (417)
..++|... ++.|.++.+.++..+...++..++.+..|+++||+++|+....+.... .++.+ ... ..+.+....
T Consensus 271 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (438)
T TIGR00712 271 LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMI 350 (438)
T ss_pred HHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHH
Confidence 35666555 457999999999999999999999999999999996543222232221 12222 222 223343334
Q ss_pred HHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHH
Q 014832 130 GRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (417)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~ 206 (417)
..++.|++........ .....|. ++|+. ..+.....+...+..++|.+.+.+.+.. ||...|++...
T Consensus 351 ~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~g~-------~~g~~~~~~~~gg~~~gp~l~G~l~~~~--g~~~~~~~~~~ 420 (438)
T TIGR00712 351 CMIVIGFLIYGPVMLI-GLHALELAPKKAAGT-------AAGFTGLFGYLGGSVAASAIVGYTVDFF--GWDGGFMVMIG 420 (438)
T ss_pred HHHHHHHHHccHHHHH-HHHHHHhcChhheee-------ehhhhchHHHhhhhhhcchhHHHHHHhc--cchHHHHHHHH
Confidence 4444554422211111 2234444 23333 3444434423223456788888888877 89999988887
Q ss_pred HHHHHHHHHHhhccccC
Q 014832 207 FLAIGMVIILSSWTENY 223 (417)
Q Consensus 207 ~~~~~~~~~~~~~~~~~ 223 (417)
..+++.+......||+|
T Consensus 421 ~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 421 GSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 77777776666777654
No 186
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.93 E-value=8.5e-09 Score=99.19 Aligned_cols=147 Identities=14% Similarity=0.067 Sum_probs=110.3
Q ss_pred hccchhHHHHHHHHHHHhHHHHHHHhhhccccCCC--CCCC---hhHHHHHHHHHHHHHHHHHHHHHhh-cCCCccchHH
Q 014832 244 ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND--EEIP---HGFIFATFMLASMLGSSLASRLMAR-SPPRVESYMQ 317 (417)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~l~ 317 (417)
+++|+.+.......+.....++....++|.|+++. .+.+ .+.....+.++..++.+++|+++|| +||| +.+.
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~--~~l~ 83 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK--KTMV 83 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH--HHHH
Confidence 34555444444444445555556666899998753 4543 4677778888999999999999999 8998 8888
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCccc---cccccccccc
Q 014832 318 IVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA---RSTIMNFFRI 394 (417)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~---r~~~~g~~~~ 394 (417)
.+..+..++.++..... +.+...+...+.+++.+...|...+++.|.+|+++ |+++.++...
T Consensus 84 ~~~~~~~~g~~~~~~~~---------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~ 148 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSI---------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYM 148 (475)
T ss_pred HHHHHHHHHHHHHHhcc---------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHH
Confidence 88887777766655443 34556667777889988888999999999998764 8889999999
Q ss_pred chhHHHHHHHHHh
Q 014832 395 PLNIFVCVVLYNV 407 (417)
Q Consensus 395 ~~~~~~~~~~~~~ 407 (417)
..|+|..+|....
T Consensus 149 ~~niG~~ig~~l~ 161 (475)
T TIGR00924 149 SINIGSFISPLLA 161 (475)
T ss_pred HHHHHHHHHHHHH
Confidence 9999988887653
No 187
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.93 E-value=3.3e-07 Score=85.43 Aligned_cols=323 Identities=15% Similarity=0.062 Sum_probs=173.3
Q ss_pred HHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhccc
Q 014832 78 FIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEHNKR 156 (417)
Q Consensus 78 ~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r 156 (417)
.++-+....+..++.+.+.|+.|.|+.+.++...+..-.+ +.+ +|-+.++..-.+.|+|.+..+... ..+++|+..|
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~Gq-G~ylt~~st~ 133 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQ-GGYLTSNSTR 133 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheeccc-ceehhhcCCh
Confidence 6677788888999999999999999999999999988777 544 456677888999999999888776 7799998444
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh--ccCCCc-h----------hHHHHHHHHHHHHHHHH--hhccc
Q 014832 157 GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS--FSLGPV-A----------PFDAAACFLAIGMVIIL--SSWTE 221 (417)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~--~~~gw~-~----------~f~~~~~~~~~~~~~~~--~~~~~ 221 (417)
....+......+++... ..+|+++--.+...-... ...+-+ . ...+.+++..+..+... ...|.
T Consensus 134 ~tie~Nisi~Wai~~~~-li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~ 212 (461)
T KOG3098|consen 134 ETIERNISIFWAIGQSS-LIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPS 212 (461)
T ss_pred hhHHHHHHHHHHHHHHH-HHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCc
Confidence 44344433333333322 322322211111110000 000111 1 11111111111111111 12222
Q ss_pred cCCCCCCchh--HHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC--CCCCCh----hHHHHHHHHH
Q 014832 222 NYGDPSESKD--LLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN--DEEIPH----GFIFATFMLA 293 (417)
Q Consensus 222 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~ 293 (417)
+....+.++. ...+..+..-+++++++.+.+...... .+....+.....|....- ....+. +......+++
T Consensus 213 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~-tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g 291 (461)
T KOG3098|consen 213 KDVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFY-TGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLG 291 (461)
T ss_pred cchhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHH-HHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHH
Confidence 1111111111 111111223345566666655444333 333333333344544332 122222 3333455667
Q ss_pred HHHHHHHHHHHHhhcCCCccc-hHHHHHHHHHHHHHHHHHHhhccCC---CCCCCCCcccchhHHHHHHHHHHHhhhccc
Q 014832 294 SMLGSSLASRLMARSPPRVES-YMQIVFVVSSVSLLLPIVTSFLVAP---SNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (417)
Q Consensus 294 ~~~~~~~~g~l~dr~g~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 369 (417)
.+++....+.+.||..+.+++ .+.++..+....+.+.......+.+ ++.+......+.....+..++.|++-....
T Consensus 292 ~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~ 371 (461)
T KOG3098|consen 292 EVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFN 371 (461)
T ss_pred HHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHH
Confidence 788888888888776544443 4444444443333333332221221 111111122234567777888899999888
Q ss_pred hhHHHHHhhcCCcccccccccccccchhHHHHHHHH
Q 014832 370 PSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
...+..+.+.+ +++|..+.++++.-..+...++..
T Consensus 372 t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 372 TQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFF 406 (461)
T ss_pred HHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999 556888888888877776665443
No 188
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.93 E-value=6.4e-08 Score=91.28 Aligned_cols=150 Identities=13% Similarity=0.024 Sum_probs=98.8
Q ss_pred hhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccc-ccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD-KQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 58 ~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~D-r~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
..+|...+|.+.++.+.+++.+...++......+.+++.| |++.|+.+..+..+.+++.+ .+..++++.+.+..++.+
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 308 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFY 308 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4566555665557788898888877766655556666665 56767777788888888877 878888888877888888
Q ss_pred HHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcc-CC-CchhHHHHHHHHHH
Q 014832 136 IATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS-LG-PVAPFDAAACFLAI 210 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~-~g-w~~~f~~~~~~~~~ 210 (417)
++.+...|.. .+++.|. ++|+. ..+..... ..+|..++|.+++.+.++.. .+ ...++...++..++
T Consensus 309 ~g~~~~~p~~-~~~~~~~~p~~~~g~-------~~g~~~~~-~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~ 379 (400)
T PRK11646 309 IGSIIAEPAR-ETLSASLADARARGS-------YMGFSRLG-LALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLI 379 (400)
T ss_pred HHHHHHHccH-HHHHHhcCCcccchh-------hhhHHHHH-HHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence 8888777776 5677776 33333 33333222 55666777777777776530 02 35566665666555
Q ss_pred HHHHHH
Q 014832 211 GMVIIL 216 (417)
Q Consensus 211 ~~~~~~ 216 (417)
......
T Consensus 380 ~~~~~~ 385 (400)
T PRK11646 380 TLLALY 385 (400)
T ss_pred HHHHHH
Confidence 554433
No 189
>PRK09669 putative symporter YagG; Provisional
Probab=98.92 E-value=5.8e-08 Score=92.99 Aligned_cols=80 Identities=11% Similarity=0.070 Sum_probs=60.5
Q ss_pred hHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hhc--CchHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 014832 73 EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKH--SPQYKILMIGRILGGIATSLLFSAFESWL 149 (417)
Q Consensus 73 ~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~~ 149 (417)
..+.+.....+...++.+++++++||+|+|+.+..+.+..++..+ ..+ .++.+.+.+..++.|++.+...+.. .++
T Consensus 265 ~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~-~am 343 (444)
T PRK09669 265 LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQ-WSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 334555666688888889999999999999999988776654333 222 3567777888899999999888777 667
Q ss_pred Hhhh
Q 014832 150 VAEH 153 (417)
Q Consensus 150 i~~~ 153 (417)
++|.
T Consensus 344 ~ad~ 347 (444)
T PRK09669 344 FSDV 347 (444)
T ss_pred HHhh
Confidence 7766
No 190
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.91 E-value=2.3e-07 Score=86.85 Aligned_cols=117 Identities=15% Similarity=0.080 Sum_probs=73.0
Q ss_pred HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH----Hhc-CchHHHHHHHHHHHHHH
Q 014832 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI----TKH-SPQYKILMIGRILGGIA 137 (417)
Q Consensus 63 l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~----~~~-~~~~~~l~~~r~l~G~~ 137 (417)
+.+++|.++.+.|+..+...++..++.++.|++.||+|||+.+..+.....+..+ ... ..+.+...+.-.+.+.+
T Consensus 221 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (377)
T PRK11102 221 YIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGC 300 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 3466899999999999999999999999999999999999999888765444322 222 23455554444444444
Q ss_pred hhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 014832 138 TSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (417)
Q Consensus 138 ~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~ 187 (417)
.+...+.. ...+.|. ++++. ..+........+|..+++.++.
T Consensus 301 ~~~~~~~~-~~~~~~~~~~~~g~-------~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 301 VSMISSNA-MAVILDEFPHMAGT-------ASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHhhHHH-HHHHhccccccchH-------HHHHHHHHHHHHHHHHHHHHHh
Confidence 44443333 2344443 22222 3333333334556666665543
No 191
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.90 E-value=1.9e-07 Score=87.98 Aligned_cols=159 Identities=10% Similarity=0.064 Sum_probs=88.7
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH--HhcC-----chHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI--TKHS-----PQYKILMI 129 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~--~~~~-----~~~~~l~~ 129 (417)
..++|.+.++ +.+............+...+..|++|+++||+|+||++.++.+...++.. .... .+++.+.+
T Consensus 272 s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~ 350 (462)
T PRK15034 272 SAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYA 350 (462)
T ss_pred HHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHH
Confidence 3355544443 22333333334445678889999999999999999999988876666553 2222 24555444
Q ss_pred HH----HHHHHHhhhhhhhHHHHHHhh-h----c--------ccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 014832 130 GR----ILGGIATSLLFSAFESWLVAE-H----N--------KRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS 192 (417)
Q Consensus 130 ~r----~l~G~~~~~~~~~~~~~~i~~-~----~--------~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~ 192 (417)
.- +..|+|.|..+-.. +.+-.+ . + .+...........++.... ..+|+.+-|.+-+...+.
T Consensus 351 ~~~~l~~~~G~gngsvfk~i-p~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~-G~~Ggf~~p~~~g~~~~~ 428 (462)
T PRK15034 351 VFMGLFLTAGLGSGSTFQMI-AVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAI-GAVGGFFIPQAFGMSLNM 428 (462)
T ss_pred HHHHHHHHhcccchHHHHhh-HHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHH-HHcccchhhHHHHHHHHH
Confidence 43 34455555554333 222221 0 0 0001111233344444444 555556666554454444
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHhhc
Q 014832 193 FSLGPVAPFDAAACFLAIGMVIILSSW 219 (417)
Q Consensus 193 ~~~gw~~~f~~~~~~~~~~~~~~~~~~ 219 (417)
. .++...|+...+..+++.++.+...
T Consensus 429 ~-g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 429 T-GSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred c-CCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 3588888888888888888777433
No 192
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.89 E-value=3.2e-07 Score=86.28 Aligned_cols=145 Identities=11% Similarity=-0.056 Sum_probs=93.3
Q ss_pred HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhh
Q 014832 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSL 140 (417)
Q Consensus 62 ~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~ 140 (417)
.+.+.+|.++.+.|++.+...++..++++..+++.||.++|+++..+.. .++..+ ..+.++++...+..++.|++.+.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~ 309 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGF 309 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhh
Confidence 3456789999999999999999999999999999999999998887753 344455 56667777777788899999888
Q ss_pred hhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHH
Q 014832 141 LFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVII 215 (417)
Q Consensus 141 ~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~ 215 (417)
..+.. .+.+.+..++....+......+.. ..++..++..+.+.+ +.+ |-|..+.+.+...++...+.
T Consensus 310 ~~~~~-~~~~q~~~~~~~~~g~~~a~~~~~----~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 310 FVVPM-NALLQHRGHVLVGAGHSIAVQNFN----ENLAMLLMLGLYSLL-VKL--GVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred hhhhH-HHHHHhhCcccccchhHHHHHhHH----HHHHHHHHHHHHHHH-HHc--CCCHHHHHHHHHHHHHHHHH
Confidence 77666 445555411111011122222233 344444444444433 344 76776666554444444333
No 193
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.89 E-value=2.4e-07 Score=82.07 Aligned_cols=161 Identities=14% Similarity=0.088 Sum_probs=115.8
Q ss_pred HHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccccc-CchHHHHHHHHHHHHHHH-HhcCchHH
Q 014832 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSCI-TKHSPQYK 125 (417)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-Grr~~~~~~~~~~~~~~~-~~~~~~~~ 125 (417)
+-.+........+|.+..|.|+|..+.|++.+...+.....++..-.+++|. ++|+..+...+...++.. +.+.+.-.
T Consensus 219 lqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~ 298 (395)
T COG2807 219 LQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQL 298 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhH
Confidence 3333444446788999999999999999999999999999999999999965 577777778888888888 77776543
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHH
Q 014832 126 ILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 204 (417)
Q Consensus 126 ~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~ 204 (417)
.++- -++.|+|.|..++.+ ..++.+. ++.....+......+.++.+ +..+|.+.+.+.|.. .+|+.+....
T Consensus 299 ~~lw-~~llG~G~G~~F~la-L~li~~rs~~a~~Aa~LSgmaQg~GYll-----Aa~GP~l~G~lhDa~-gsw~~~~~~l 370 (395)
T COG2807 299 PILW-ALLLGLGQGGAFPLA-LTLILLRSSDAAIAAALSGMAQGVGYLL-----AAFGPWLFGFLHDAT-GSWSAPLVLL 370 (395)
T ss_pred HHHH-HHHHhCccchHHHHH-HHHHHhhcCChHHHHHHHHHhhhhhHHH-----HhhhhhhHhHHHHhc-CChHHHHHHH
Confidence 3333 489999999999988 6677776 22223333333333344443 256777777777654 4799988887
Q ss_pred HHHHHHHHHHHH
Q 014832 205 ACFLAIGMVIIL 216 (417)
Q Consensus 205 ~~~~~~~~~~~~ 216 (417)
+...+...+.-+
T Consensus 371 ~~~~i~m~i~Gl 382 (395)
T COG2807 371 ALATLLMLIFGL 382 (395)
T ss_pred HHHHHHHHHHHh
Confidence 777666665544
No 194
>TIGR00898 2A0119 cation transport protein.
Probab=98.88 E-value=1.5e-07 Score=91.88 Aligned_cols=148 Identities=14% Similarity=0.043 Sum_probs=99.1
Q ss_pred HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchH--HHHHHHHHHHHHHhhhh
Q 014832 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQY--KILMIGRILGGIATSLL 141 (417)
Q Consensus 65 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~--~~l~~~r~l~G~~~~~~ 141 (417)
++++.+.... .....+....+.++.+++.||+|||+.+..+.++.+++.+ ..+.++. +......++.+++.+..
T Consensus 351 ~~~~~~~~~~---~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (505)
T TIGR00898 351 GNLGGNIYLD---LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSA 427 (505)
T ss_pred cccCCChHHH---HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHH
Confidence 4455543322 3334456667777899999999999999999988888887 6666543 44555556666776666
Q ss_pred hhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccc
Q 014832 142 FSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTE 221 (417)
Q Consensus 142 ~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 221 (417)
++.. ..+..|. .+.+.+....+..... ..+|.+++|.+.+ +. .. ++..++.+.+...++..++.. ..||
T Consensus 428 ~~~~-~~~~~e~----~p~~~r~~~~g~~~~~-~~ig~~i~p~i~~-~~-~~--~~~~~~~~~~~~~~~~~~~~~-~lpe 496 (505)
T TIGR00898 428 FQMV-YLYTAEL----YPTVVRNLGVGVCSTM-ARVGSIISPFLVY-LG-EK--WLFLPLVLFGGLALLAGILTL-FLPE 496 (505)
T ss_pred HHHH-HHHhccc----ccHHHHhhhHhHHHHH-HHHHHHHHhHHHH-HH-HH--HHhhHHHHHHHHHHHHHHHHH-cCcC
Confidence 6666 5677777 3444444456666655 5677788887777 33 33 667788887777777666655 6787
Q ss_pred cCCCC
Q 014832 222 NYGDP 226 (417)
Q Consensus 222 ~~~~~ 226 (417)
+++++
T Consensus 497 t~~~~ 501 (505)
T TIGR00898 497 TKGVP 501 (505)
T ss_pred CCCCC
Confidence 76543
No 195
>PRK10133 L-fucose transporter; Provisional
Probab=98.88 E-value=1.9e-07 Score=89.04 Aligned_cols=137 Identities=10% Similarity=0.048 Sum_probs=94.9
Q ss_pred HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhh
Q 014832 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFS 143 (417)
Q Consensus 65 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~ 143 (417)
+++|.++.+.++....+.++..+++++.|++.||+|+|+++..+..+..++.+ ..+.++.+ .+..-.+.|++.+..+|
T Consensus 288 ~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P 366 (438)
T PRK10133 288 EIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYP 366 (438)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999988877777666 55555543 24556789999999999
Q ss_pred hHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCC-CchhHHHHHHHHHHHHHH
Q 014832 144 AFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLG-PVAPFDAAACFLAIGMVI 214 (417)
Q Consensus 144 ~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~g-w~~~f~~~~~~~~~~~~~ 214 (417)
.. .....|. ++.+...+ ... . ..+|..++|.+.+.+.+.. | -|..|++..+..+.....
T Consensus 367 ~~-~s~a~~~~~~~~~~as~----l~~-~----~~~g~~~~~~i~G~l~~~~--g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 367 TI-FSLGIKNLGQDTKYGSS----FIV-M----TIIGGGIVTPVMGFVSDAA--GNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HH-HHHHHcccchhhccchh----HHh-H----HhccchHHHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHH
Confidence 88 4455443 21121111 111 1 2234455566666666665 6 678887665554444433
No 196
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.88 E-value=2.7e-07 Score=89.61 Aligned_cols=117 Identities=17% Similarity=0.051 Sum_probs=84.1
Q ss_pred hhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hhc---CchHHHHHHHHH
Q 014832 58 PYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKH---SPQYKILMIGRI 132 (417)
Q Consensus 58 ~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~---~~~~~~l~~~r~ 132 (417)
.+.| .+++.+|.|+.+.|.......++..++.++.|++.||+|+|+.+..+.++.+++.. ... .++.+......+
T Consensus 280 ~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 359 (495)
T PRK14995 280 LLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMA 359 (495)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 4555 44566899999999999999999999999999999999999999888888777665 432 245666677889
Q ss_pred HHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHH
Q 014832 133 LGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGN 175 (417)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~ 175 (417)
+.|++.+...+.. ...+.+. ++++...+.......++..+|.
T Consensus 360 l~G~g~g~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ 404 (495)
T PRK14995 360 LLGFSAASALLAS-TSAIMAAAPPEKAAAAGAIETMAYELGAGLGI 404 (495)
T ss_pred HHHHhHHHHHHHH-HHHHHhcCCHHhcchHHHHHHHHHHHHHHHHH
Confidence 9999999887766 3344443 4455444444433334433333
No 197
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.87 E-value=6.9e-08 Score=89.63 Aligned_cols=96 Identities=18% Similarity=0.142 Sum_probs=76.8
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHH-HHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC-----------ch
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGF-GSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS-----------PQ 123 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~-~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~-----------~~ 123 (417)
....|...+++|.++++.+.+.++.. ++..++.+++|++.||+|||+.+..+.++.+++.. ..+. ++
T Consensus 229 ~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (356)
T TIGR00901 229 TVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPH 308 (356)
T ss_pred HHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccch
Confidence 45566666679999999998887655 67888999999999999999998888887777655 4432 45
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHhhh
Q 014832 124 YKILMIGRILGGIATSLLFSAFESWLVAEH 153 (417)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~ 153 (417)
.+.+....++.+++.+...+.. .+++.|.
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~ 337 (356)
T TIGR00901 309 LLMLFLTITLEAVTGGLGTVAF-VAFLSKL 337 (356)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH-HHHHHHh
Confidence 6778888899999999888888 6788887
No 198
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.86 E-value=6e-08 Score=93.05 Aligned_cols=153 Identities=19% Similarity=0.159 Sum_probs=127.7
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccC--chHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG--RKRACVTYCLTYILSCI-TKHSPQYKILMIGRIL 133 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G--rr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l 133 (417)
..++|...++.+.++.+.+.+.++..+...++.+..|+++|+.. ++.+..++++..+++.+ +.++++++.+...-++
T Consensus 318 ~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~ 397 (509)
T KOG2504|consen 318 FVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSIL 397 (509)
T ss_pred HHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 56677777899999999999999999999999999999999988 55677778888888888 9999999999999999
Q ss_pred HHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHH
Q 014832 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMV 213 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~ 213 (417)
.|++.|...... +..+.|. ...+.....+++.... .+++.+++|.+++++.+.. .+|...|+..++..+++..
T Consensus 398 fG~~~g~~~~l~-~~i~~~~----~g~~~l~~a~Gl~l~~-~gi~~l~gpPiag~~~d~t-g~Y~~~f~~~g~~~~~s~~ 470 (509)
T KOG2504|consen 398 FGFCVGSFSSLT-PVILVDL----VGLEKLSNAYGLLLLF-QGIGALVGPPIAGLLYDIT-GNYDHAFYFCGLCFLLSAV 470 (509)
T ss_pred HHHHHHHHHHHH-HHHHHHH----cChhhcchHHHHHHHH-hHHHHHcCcccceeeeecc-CCeeeehhhcChHHHHHHH
Confidence 999999886665 5567777 4444555577777777 8888999999999888776 2399999999988777776
Q ss_pred HHH
Q 014832 214 IIL 216 (417)
Q Consensus 214 ~~~ 216 (417)
..+
T Consensus 471 ~~~ 473 (509)
T KOG2504|consen 471 LLL 473 (509)
T ss_pred HHH
Confidence 555
No 199
>PRK11043 putative transporter; Provisional
Probab=98.85 E-value=5.2e-07 Score=85.24 Aligned_cols=95 Identities=13% Similarity=0.130 Sum_probs=67.5
Q ss_pred hhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-H---hc--CchHHHHHHHH
Q 014832 58 PYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-T---KH--SPQYKILMIGR 131 (417)
Q Consensus 58 ~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~---~~--~~~~~~l~~~r 131 (417)
...|.+.+++|.++.+.|+......++..++....+++.||+|+|+.........+++.+ . .. .++.+.+++..
T Consensus 224 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (401)
T PRK11043 224 TGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPF 303 (401)
T ss_pred HHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHH
Confidence 445666678899999999888888888899999999999999999876655544444332 2 11 34555566666
Q ss_pred HHHHHHhhhhhhhHHHHHHhhh
Q 014832 132 ILGGIATSLLFSAFESWLVAEH 153 (417)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~ 153 (417)
.+.|++.+...+.. .....|.
T Consensus 304 ~~~~~~~~~~~~~~-~~~~~~~ 324 (401)
T PRK11043 304 CVMAAANGAIYPIV-VAQALRP 324 (401)
T ss_pred HHHHHHHHHHHHHH-HHHHhhh
Confidence 77888888877766 3444443
No 200
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.84 E-value=4.1e-08 Score=93.52 Aligned_cols=138 Identities=9% Similarity=0.038 Sum_probs=97.1
Q ss_pred HHHHHHHhHHHHHHHhhhccccCCCCCCCh---hHHHHHHHHHHHHHHHHHHHHHhhc-CCCccchHHHHHHHHHHHHHH
Q 014832 254 AIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMARS-PPRVESYMQIVFVVSSVSLLL 329 (417)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~l~~~~~~~~~~~~~ 329 (417)
+.........++....++|.|+++..+.+. +.+...+.....++.+++|+++||+ ||| |.+..+..+..++.++
T Consensus 15 ~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr--r~iliG~il~~lg~ll 92 (493)
T PRK15462 15 VALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR--MAVMLGALLMAIGHVV 92 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH--HHHHHHHHHHHHHHHH
Confidence 333344444555666689999887555544 4455666677888999999999999 988 8888777777766554
Q ss_pred HHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcc--cccccccccccchhHHHHHHHHHh
Q 014832 330 PIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEE--ARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~--~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
+..... +.....+...+..++.+...+...+++.|.+|++ +|.++.++.....|++..++....
T Consensus 93 l~~~~~--------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~ 158 (493)
T PRK15462 93 LGASEI--------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC 158 (493)
T ss_pred HHHhhc--------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH
Confidence 432210 1122334445555677776787889999999986 799999999999999988887754
No 201
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.82 E-value=1.9e-07 Score=90.13 Aligned_cols=89 Identities=15% Similarity=0.100 Sum_probs=66.3
Q ss_pred HHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hhc-----CchHHHHHHHHHHHHHH
Q 014832 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKH-----SPQYKILMIGRILGGIA 137 (417)
Q Consensus 64 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~-----~~~~~~l~~~r~l~G~~ 137 (417)
.++..-++...+.+.+...++..++.+++++++||+|+|+.+..+..+..++.+ ... .++.+.+++.-++.|++
T Consensus 258 ~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~ 337 (473)
T PRK10429 258 FTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIG 337 (473)
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHH
Confidence 344333556667777777788899999999999999999999988877666555 322 34566777777888999
Q ss_pred hhhhhhhHHHHHHhhh
Q 014832 138 TSLLFSAFESWLVAEH 153 (417)
Q Consensus 138 ~~~~~~~~~~~~i~~~ 153 (417)
.+...+.. .++++|.
T Consensus 338 ~~~~~~~~-~am~ad~ 352 (473)
T PRK10429 338 TALFWVLQ-VIMVADT 352 (473)
T ss_pred HHHHHHHH-HHHHhhh
Confidence 88887766 5677766
No 202
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.82 E-value=9.2e-08 Score=91.12 Aligned_cols=130 Identities=20% Similarity=0.213 Sum_probs=92.8
Q ss_pred HhhhhhhhHHHHHH-hcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc--hHHHH
Q 014832 52 GDWLQGPYVYYLYS-TYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP--QYKIL 127 (417)
Q Consensus 52 ~~~~~~~~l~~l~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~--~~~~l 127 (417)
.........+...+ .+|.+ ...+.+..+..++..++.+++++++||+|+|+.+..+..+.+++.+ ..+.+ +.+.+
T Consensus 240 ~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (428)
T PF13347_consen 240 AFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLV 318 (428)
T ss_pred hhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHH
Confidence 33333444444444 35544 6678888889999999999999999999999999999999999988 77775 89999
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHhhh-c---c--cchhhhHHHHHHHHHHHHHHHHHHHHHh
Q 014832 128 MIGRILGGIATSLLFSAFESWLVAEH-N---K--RGFEQQWLSITFSKAIFLGNGLVAILSG 183 (417)
Q Consensus 128 ~~~r~l~G~~~~~~~~~~~~~~i~~~-~---~--r~~~~~~~~~~~~~~~~~g~~~g~~l~~ 183 (417)
++.-++.|++.+..++.. .++++|. + . ..+..+......+...-.+..++..+..
T Consensus 319 ~i~~~l~gi~~~~~~~~~-~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 319 LILFILAGIGYGAFFVIP-WAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred HHHHHHhHhhhccccccc-ccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 999999999999988776 6677776 1 1 1233444444444444454544444333
No 203
>TIGR00895 2A0115 benzoate transport.
Probab=98.81 E-value=2.5e-07 Score=86.98 Aligned_cols=127 Identities=17% Similarity=0.103 Sum_probs=90.8
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGG 135 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G 135 (417)
..+.|.+.+++|.++.+.+...+...++..++.++.|++.||+|||+......+......+ ....++.+.+.+..++.|
T Consensus 270 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 349 (398)
T TIGR00895 270 TNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAG 349 (398)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 4566777788999999999999999999999999999999999999555544444433333 333567777788889999
Q ss_pred HHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 014832 136 IATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLL 189 (417)
Q Consensus 136 ~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~ 189 (417)
++.+...+.. .+++.|. .+.+.+....+..... ..+|..++|.+.+.+
T Consensus 350 ~~~~~~~~~~-~~~~~~~----~~~~~~g~~~g~~~~~-~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 350 FFVNGGQSGL-YALMALF----YPTAIRATGVGWAIGI-GRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHH-HHHHhhc----CCHHHHHHHHHHHHHH-HHHHHHHHHHhHHhc
Confidence 9988887777 5677777 2222333345555544 456667777766543
No 204
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.78 E-value=4.8e-07 Score=87.74 Aligned_cols=129 Identities=11% Similarity=0.137 Sum_probs=89.8
Q ss_pred hhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hhc--C--chHHHHHHH
Q 014832 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKH--S--PQYKILMIG 130 (417)
Q Consensus 57 ~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~--~--~~~~~l~~~ 130 (417)
..++|.+. +.+|.++.+.|+......++..++.++.|++.||+|||+.+..+..+.+++.. ..+ . .+.+.+...
T Consensus 275 ~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (485)
T TIGR00711 275 FYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALP 354 (485)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHH
Confidence 44566444 56899999999999999999999999999999999999999999888888777 552 2 345667777
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 014832 131 RILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVD 191 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~ 191 (417)
.++.|++.+...+.. .....+. .+.+......+..... ..+|..+++.+.+.+.+
T Consensus 355 ~~l~g~g~~~~~~~~-~~~~~~~----~~~~~~g~~~~~~~~~-~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 355 QFIRGFGMGCFFMPL-TTIALSG----LPPHKIARGSSLSNFT-RQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhc----CCHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 889999998876655 3344343 1112222233333333 44555666666555544
No 205
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.77 E-value=3.4e-07 Score=78.86 Aligned_cols=131 Identities=18% Similarity=0.089 Sum_probs=93.6
Q ss_pred hhHHHHHHHHHHHHhhh---hhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHH
Q 014832 39 KNNYLLVYSLMMAGDWL---QGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS 115 (417)
Q Consensus 39 ~~~~~~~~~~~~~~~~~---~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~ 115 (417)
||..+......+...+. ...+-|++.+++|+|.+|...+.....+|..+ +++.|.+.||+|+|.++.+|.+...++
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVG 79 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 35444444444444432 25777899999999999999999999999886 588999999999999999999988888
Q ss_pred HH-HhcC-------chHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHH
Q 014832 116 CI-TKHS-------PQYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKA 170 (417)
Q Consensus 116 ~~-~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~ 170 (417)
.. ...+ .++|.+.+..++.|.+.+...+++..+-+.+. ++||...+......++.
T Consensus 80 Y~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLS 143 (250)
T PF06813_consen 80 YGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLS 143 (250)
T ss_pred HHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhH
Confidence 76 4432 35688888888888877665554423233344 77777666655544443
No 206
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.76 E-value=4e-07 Score=87.80 Aligned_cols=153 Identities=12% Similarity=-0.007 Sum_probs=90.5
Q ss_pred hhhHHHH-HHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHH--------HHHHHHH--HHHHHH-Hhc-Cch
Q 014832 57 GPYVYYL-YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA--------CVTYCLT--YILSCI-TKH-SPQ 123 (417)
Q Consensus 57 ~~~l~~l-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~--------~~~~~~~--~~~~~~-~~~-~~~ 123 (417)
..++|.+ .+++|.+..+.|+..+...++..++.++.|+++||+++|+. +..+... .++..+ ... ..+
T Consensus 281 ~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (465)
T TIGR00894 281 PTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAA 360 (465)
T ss_pred HHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 4567744 46789999999999999999999999999999999865421 1111111 112122 222 234
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcc-CCCchhHH
Q 014832 124 YKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS-LGPVAPFD 202 (417)
Q Consensus 124 ~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~-~gw~~~f~ 202 (417)
....++.-.+.+.+.+...+.. .....|. ..+......++.... ..+++.++|.+.+.+.+... .+|+..|.
T Consensus 361 ~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~-----~~~~~g~~~g~~~~~-~~l~~~i~p~l~g~~~~~~~~~~~~~~f~ 433 (465)
T TIGR00894 361 FYLTIIILTLANAVSSGPLAGV-LINSLDL-----APRFLGFIKGITGLP-GFIGGLIASTLAGNILSQDSKNVWLIVFL 433 (465)
T ss_pred hHHHHHHHHHHHHHhhhhhhhh-hhchhhc-----ChhHHHHHHHHHHHH-HHHHHHHHHHhhheeeCCCCchHHHHHHH
Confidence 4444444444454444333322 2222232 122344455555555 56777888888777665421 14888898
Q ss_pred HHHHHHHHHHHHHH
Q 014832 203 AAACFLAIGMVIIL 216 (417)
Q Consensus 203 ~~~~~~~~~~~~~~ 216 (417)
+.++..++..++..
T Consensus 434 ~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 434 IMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHHHHee
Confidence 88877777665544
No 207
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.76 E-value=1.2e-06 Score=80.00 Aligned_cols=101 Identities=21% Similarity=0.246 Sum_probs=71.7
Q ss_pred HhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccc----cCchHHHHHHHH-HHHHHHH-HhcCchH-
Q 014832 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK----QGRKRACVTYCL-TYILSCI-TKHSPQY- 124 (417)
Q Consensus 52 ~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr----~Grr~~~~~~~~-~~~~~~~-~~~~~~~- 124 (417)
+...+..++++..+++|++....+.+-...-+...+.+|+.|..+|| |||||.++.... ..+++.+ ..++.++
T Consensus 47 ~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig 126 (498)
T KOG0637|consen 47 GWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIG 126 (498)
T ss_pred HHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhh
Confidence 34455678888889999999999988888889999999999999995 899888777644 4444444 6666543
Q ss_pred ----------------HHHHHHHHHHHHHhhhhhhhHHHHHHhhh
Q 014832 125 ----------------KILMIGRILGGIATSLLFSAFESWLVAEH 153 (417)
Q Consensus 125 ----------------~~l~~~r~l~G~~~~~~~~~~~~~~i~~~ 153 (417)
..++++-.+.=++.-.....+ -+++.|.
T Consensus 127 ~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~-ra~L~Dl 170 (498)
T KOG0637|consen 127 LLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPC-RALLADL 170 (498)
T ss_pred HHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhH-HHHHHHh
Confidence 233333344445555555666 4688887
No 208
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.75 E-value=8.3e-08 Score=92.50 Aligned_cols=146 Identities=12% Similarity=0.090 Sum_probs=103.5
Q ss_pred ccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCCh---hHHHHHHHHHHHHHHHHHHHHHhh-cCCCccchHHHHH
Q 014832 245 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH---GFIFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVF 320 (417)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~l~~~~ 320 (417)
++|+-....+...+..-..++....+++.|+++..+.+. +.+...+.....+..+++|+++|| +||| |.+..+.
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r--~~~~~g~ 88 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK--RTIVLGA 88 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH--HHHHHHH
Confidence 344433343433344555555666678888887555544 334445555666677899999999 9999 8888888
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcc--cccccccccccchhH
Q 014832 321 VVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEE--ARSTIMNFFRIPLNI 398 (417)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~--~r~~~~g~~~~~~~~ 398 (417)
.+..++.+...+... .....++...+.+++.+...|...+++.|.+|++ +|++++++.....|+
T Consensus 89 ~~~~~g~~~~~~~~~--------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ni 154 (489)
T PRK10207 89 IVLAIGYFMTGMSLL--------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINI 154 (489)
T ss_pred HHHHHHHHHHHHhcc--------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHH
Confidence 888877766555431 1233446677788999998999999999999887 457889999999999
Q ss_pred HHHHHHHH
Q 014832 399 FVCVVLYN 406 (417)
Q Consensus 399 ~~~~~~~~ 406 (417)
+..++...
T Consensus 155 g~~~g~~l 162 (489)
T PRK10207 155 GSLISLSL 162 (489)
T ss_pred HHHHHHHH
Confidence 98877553
No 209
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.75 E-value=4.7e-07 Score=97.36 Aligned_cols=96 Identities=15% Similarity=0.133 Sum_probs=81.0
Q ss_pred hhhHH-HHHHhcCCCcc-hHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHH
Q 014832 57 GPYVY-YLYSTYGFGKG-EIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRIL 133 (417)
Q Consensus 57 ~~~l~-~l~~~~g~s~~-~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l 133 (417)
...+| .+.+++|.+.. +.|++.+...++..+++++.|+++||+++|+.+.++.++.+++.+ ..+..+.+.+++..++
T Consensus 252 ~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (1146)
T PRK08633 252 QANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFL 331 (1146)
T ss_pred HHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 34455 44567899998 999999999999999999999999999999999988888888888 8778888888888999
Q ss_pred HHHHhhhhhhhHHHHHHhhh
Q 014832 134 GGIATSLLFSAFESWLVAEH 153 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~ 153 (417)
.|++.+...+.. .+++.+.
T Consensus 332 ~g~~~~~~~~~~-~~~~~~~ 350 (1146)
T PRK08633 332 FGFSAGLFIVPL-NALIQFR 350 (1146)
T ss_pred HHHHHHHhhHHH-HHHHhhc
Confidence 999988877766 5566665
No 210
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.73 E-value=7.5e-08 Score=91.19 Aligned_cols=118 Identities=14% Similarity=0.135 Sum_probs=93.9
Q ss_pred hccccCCCCCC---ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCc
Q 014832 271 TPALSPNDEEI---PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGI 347 (417)
Q Consensus 271 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (417)
.| .++++++. +.+...+.+.++..++.++.|++.||+||| +.+..+..+..+......+.+
T Consensus 31 ~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r--~~~~~~~~~~~~~~~~~~~~~------------- 94 (412)
T TIGR02332 31 GL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR--RWIAGIMVLWGIASTATMFAT------------- 94 (412)
T ss_pred HH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH--HHHHHHHHHHHHHHHHHHHhc-------------
Confidence 45 34443443 347777888889999999999999999998 887777777777666665554
Q ss_pred ccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 348 SFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 348 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
+.+.+++.-++.|++.+...|....++.|.+|+++|++++++.+...+++..++...
T Consensus 95 --~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~ 151 (412)
T TIGR02332 95 --GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLIL 151 (412)
T ss_pred --CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556777788889999999889988999999999999999999988888777766554
No 211
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.73 E-value=2.2e-07 Score=90.38 Aligned_cols=162 Identities=14% Similarity=0.008 Sum_probs=93.4
Q ss_pred hhHHHHHHhcCCCcchHHH------------HHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc--
Q 014832 58 PYVYYLYSTYGFGKGEIGQ------------LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP-- 122 (417)
Q Consensus 58 ~~l~~l~~~~g~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~-- 122 (417)
.+.|.+.++.|.+..+.+. ......++..++.+..++++||+|||++++.+..+.+++.. .....
T Consensus 309 ~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~ 388 (502)
T TIGR00887 309 LNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH 388 (502)
T ss_pred cccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 3466677788887543211 12233455666778899999999999999888877776655 44321
Q ss_pred --hHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc-------
Q 014832 123 --QYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF------- 193 (417)
Q Consensus 123 --~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~------- 193 (417)
+...+...-+...++.....+.. ..+.+|. .+.+.+....++.... ..++..+++.+.+.+.+..
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~E~----~p~~~R~~~~g~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~ 462 (502)
T TIGR00887 389 LSTHGFLAIYVLAQFFANFGPNATT-FIVPGEV----FPTRYRSTAHGISAAS-GKAGAIIGQFGFLYLAQHGDPTKGYP 462 (502)
T ss_pred cchhHHHHHHHHHHHHHhcCCCchh-hhhhhcc----CchhHHHHHHHHHHHH-hhhHHHHHHHHhhhhhcccccccccc
Confidence 11111111111111111122333 4456777 4444555566666666 5566777777777666531
Q ss_pred -cCCCchhHHHHHHHHHHHHHHHHhhccccCCCC
Q 014832 194 -SLGPVAPFDAAACFLAIGMVIILSSWTENYGDP 226 (417)
Q Consensus 194 -~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (417)
..++...|++.++..++..+.. +..||+++++
T Consensus 463 ~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~ 495 (502)
T TIGR00887 463 TGIWMGHVLEIFALFMFLGILFT-LLIPETKGKS 495 (502)
T ss_pred ccccchHHHHHHHHHHHHHHHHh-eEeccCCCCC
Confidence 0144567777777766665544 3678877643
No 212
>PRK11462 putative transporter; Provisional
Probab=98.71 E-value=2e-06 Score=82.56 Aligned_cols=83 Identities=5% Similarity=-0.057 Sum_probs=53.1
Q ss_pred CcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC-c-hHHHHHHHHHHHHHHhhhhhhhHH
Q 014832 70 GKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS-P-QYKILMIGRILGGIATSLLFSAFE 146 (417)
Q Consensus 70 s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~-~-~~~~l~~~r~l~G~~~~~~~~~~~ 146 (417)
++...+.+...+.++..++.+++++++||+|+|+++..+.....+..+ ..+. . +.+.+.+.-++.|++.+...+..
T Consensus 261 ~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~- 339 (460)
T PRK11462 261 TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQ- 339 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 344456677777888899999999999999999987755544444333 3222 2 23334445566777776655544
Q ss_pred HHHHhhh
Q 014832 147 SWLVAEH 153 (417)
Q Consensus 147 ~~~i~~~ 153 (417)
.++++|.
T Consensus 340 ~~m~ad~ 346 (460)
T PRK11462 340 WVMMSDT 346 (460)
T ss_pred HHHHHHh
Confidence 4455555
No 213
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.67 E-value=9.8e-07 Score=83.08 Aligned_cols=164 Identities=16% Similarity=0.084 Sum_probs=102.3
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc---h-H--H---H
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP---Q-Y--K---I 126 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~---~-~--~---~ 126 (417)
..+...+.++-|++..+.-+..........+..+++..+.||+|||+.++.+.....+..+ +.... + . | .
T Consensus 290 ~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~ 369 (485)
T KOG0569|consen 290 FFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYL 369 (485)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 3444477788999999999998888899999999999999999999999999888877766 44432 1 1 1 1
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHH
Q 014832 127 LMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (417)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~ 206 (417)
.+++.++..++.+........-+.+|.-+++.+........ ......+.+-...-|.+... . |- +.|.+..+
T Consensus 370 ~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~-~~~w~~~fiv~~~fp~l~~~----~--g~-~~filF~i 441 (485)
T KOG0569|consen 370 CIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVAT-AVNWLSNFIVGFAFPPLQNV----I--GP-YVFILFVI 441 (485)
T ss_pred HHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHH----h--cc-hhhHHHHH
Confidence 23444444444443322331446788833322222222122 22222232222333333332 2 43 67778888
Q ss_pred HHHHHHHHHHhhccccCCCCCC
Q 014832 207 FLAIGMVIILSSWTENYGDPSE 228 (417)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~ 228 (417)
.+++..+..++..||+|+++..
T Consensus 442 ~~~~~~i~~~~~lPETkgr~~~ 463 (485)
T KOG0569|consen 442 PLAIFLIYLYRYLPETKGRTPY 463 (485)
T ss_pred HHHHHHHHHHHhCcccCCCCHH
Confidence 8888888888899999977643
No 214
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.67 E-value=7.7e-07 Score=83.06 Aligned_cols=137 Identities=19% Similarity=0.100 Sum_probs=84.6
Q ss_pred hhhHHH-HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccC-chHH-HHHHH-HHHHHHHH-Hhc--CchHHHHHH
Q 014832 57 GPYVYY-LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQG-RKRA-CVTYC-LTYILSCI-TKH--SPQYKILMI 129 (417)
Q Consensus 57 ~~~l~~-l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~G-rr~~-~~~~~-~~~~~~~~-~~~--~~~~~~l~~ 129 (417)
..+.|. +.+++|.++.+.+...+...++..++.++.|++.||.. ||+. +.... ....++.. ... ..+.+...+
T Consensus 236 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (379)
T TIGR00881 236 LDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLI 315 (379)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHH
Confidence 345554 44678999999999999999999999999999999864 3332 22222 22222222 222 334555566
Q ss_pred HHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhH
Q 014832 130 GRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPF 201 (417)
Q Consensus 130 ~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f 201 (417)
..++.|.......+.. ..+..|. .+.+.+....++.... ..+|..++|.+.+.+.+.. ||+..|
T Consensus 316 ~~~~~g~~~~~~~~~~-~~~~~~~----~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~--g~~~~f 379 (379)
T TIGR00881 316 CLFALGFLVYGPQMLI-GVIASEL----APKKAAGTAAGFVGFF-AYLGGILAGLPLGYLADGF--GWAGAF 379 (379)
T ss_pred HHHHHHHHHhhhhHHH-HHHHHHh----cCcchhHHHHHHHHHh-hhhhhhhhhhhHHHHHHhh--cccccC
Confidence 6677776554444443 3456665 1122223344444444 5666678888888888887 898764
No 215
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.67 E-value=3.1e-06 Score=79.75 Aligned_cols=122 Identities=15% Similarity=0.035 Sum_probs=76.4
Q ss_pred HHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHH-HHHHHHH-Hhc--CchHHHHHHHHHHH
Q 014832 60 VYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL-TYILSCI-TKH--SPQYKILMIGRILG 134 (417)
Q Consensus 60 l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~-~~~~~~~-~~~--~~~~~~l~~~r~l~ 134 (417)
.+.+. +.+|.++.+.+++.....++..+++++.+++.||++++........ ...+... ... ..+.+.+....++.
T Consensus 230 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (394)
T PRK11652 230 SGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALF 309 (394)
T ss_pred ChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 34344 4589999999999888889999999999999999984443332222 2222222 222 34567777888999
Q ss_pred HHHhhhhhhhHHHHHHhhh--cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 014832 135 GIATSLLFSAFESWLVAEH--NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV 190 (417)
Q Consensus 135 G~~~~~~~~~~~~~~i~~~--~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~ 190 (417)
|++.+...+.. ..+..|. ++++. ..++.... ..+|..+++.+++.+.
T Consensus 310 ~~g~~~~~~~~-~~~~~~~~~~~~g~-------~~~~~~~~-~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 310 FFGAGMLFPLA-TSGAMEPFPYLAGT-------AGALLGGL-QNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHH-HHHHHhhccccchH-------HHHHHHHH-HHHHHHHHHHHHHHcc
Confidence 99999887877 5566565 22222 22222222 4455566666666553
No 216
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.66 E-value=9.1e-07 Score=94.97 Aligned_cols=104 Identities=10% Similarity=-0.113 Sum_probs=78.6
Q ss_pred hhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC-------------
Q 014832 57 GPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS------------- 121 (417)
Q Consensus 57 ~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~------------- 121 (417)
...+|.+. +.+|.++.+.|++.+...++..+++++.|+++||.++++.+..+.++.+++.+ ..+.
T Consensus 245 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 324 (1140)
T PRK06814 245 LSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKS 324 (1140)
T ss_pred HHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccc
Confidence 34556444 56899999999999999999999999999999998887776666666555554 4442
Q ss_pred -------chHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhh
Q 014832 122 -------PQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQ 161 (417)
Q Consensus 122 -------~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~ 161 (417)
++.+.+.+..++.|++.+...+.. .+++.+. +.+|+..+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~~~~G~v~g 373 (1140)
T PRK06814 325 ILVFLSKRHGWRILIDLFGLAAAGGLYIVPL-FAALQAWANPAHRARVIA 373 (1140)
T ss_pred hhhhhcccccHHHHHHHHHHHHHHHHhHHHH-HHHHHhhCCcccceeeeH
Confidence 677888888899999988887776 5676666 44554333
No 217
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.65 E-value=1e-06 Score=81.33 Aligned_cols=125 Identities=20% Similarity=0.210 Sum_probs=88.6
Q ss_pred hhhhhhhHHHH-HHhcCCC-cchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc---hHHH
Q 014832 53 DWLQGPYVYYL-YSTYGFG-KGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP---QYKI 126 (417)
Q Consensus 53 ~~~~~~~l~~l-~~~~g~s-~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~---~~~~ 126 (417)
.......+|.+ .+++|.+ ..+.+...+...+...++.++.|++.||+|+|+..........+..+ ..... +...
T Consensus 222 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (352)
T PF07690_consen 222 FSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVW 301 (352)
T ss_dssp HHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHH
T ss_pred HHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 33345666654 6889999 78999999999999999999999999999998887777777666666 54443 4567
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHh
Q 014832 127 LMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSG 183 (417)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~ 183 (417)
.+..-++.|++.+...+.. ..++.|.. +.+......+..... ..++..++|
T Consensus 302 ~~~~~~~~g~~~~~~~~~~-~~~~~~~~----~~~~~g~~~g~~~~~-~~~~~~igP 352 (352)
T PF07690_consen 302 LIIALFLIGFGFGIVFPIL-FSLIQELV----PPEYRGTAFGLFNSI-GSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHCHHH-HHHHHCCC----HTCHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHhC----CHHHHHHHHHHHHHH-HHHHHHHCC
Confidence 7778888999988888877 56777762 222233344444444 445555544
No 218
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.65 E-value=1.4e-05 Score=79.26 Aligned_cols=156 Identities=16% Similarity=0.174 Sum_probs=109.8
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccc-cCchHHHHHHHHHHHHHHH-HhcCch--------HHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCLTYILSCI-TKHSPQ--------YKI 126 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~~~~~~~~~~~~-~~~~~~--------~~~ 126 (417)
..+...+.+.+|.+.++...+...+....-+...++|.++|+ +||++.+.++.++..++.. .++... ...
T Consensus 8 aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 8 TILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 444446667899999988888888887778888899999997 5999999999999888887 655421 233
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc-----cCCCchh
Q 014832 127 LMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF-----SLGPVAP 200 (417)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~-----~~gw~~~ 200 (417)
.+++-.+..+|.|+.-+.. .+...|. +++. .+.....++..... .++|+.+++.+..++.+.. ..+|...
T Consensus 88 ~l~gLaLia~G~GgiKp~v-saf~gdqf~~~~--~~~~~s~F~~fY~~-iNiGSlis~~i~~~l~~~~~~fg~~~~~~~a 163 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCV-SAFGGDQFEERQ--LSLRSRFFSFFYFA-INAGSLISTIITPILRGDVGCFGCQDCYPLA 163 (654)
T ss_pred HHHHHHHHHhhccccccCc-hhhhHhhcCccc--hhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhcccccCcchHHH
Confidence 5667788888989888887 6788876 2211 12233355555555 5666676666666554221 1269999
Q ss_pred HHHHHHHHHHHHHHHH
Q 014832 201 FDAAACFLAIGMVIIL 216 (417)
Q Consensus 201 f~~~~~~~~~~~~~~~ 216 (417)
|.+.++..+++.++..
T Consensus 164 F~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 164 FGVPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999888777766554
No 219
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.63 E-value=5.6e-06 Score=77.02 Aligned_cols=146 Identities=11% Similarity=0.090 Sum_probs=83.1
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCch---HHHHH-HHHHHHHHHH-HhcCchHHHHHHHH
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRK---RACVT-YCLTYILSCI-TKHSPQYKILMIGR 131 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr---~~~~~-~~~~~~~~~~-~~~~~~~~~l~~~r 131 (417)
...+|.+.++.|.+.. .+...++..+...++. ++++||.+|| +.... ..+..++... .....+.+...+.-
T Consensus 212 ~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g~---~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 287 (368)
T TIGR00903 212 AIWLEAALRPAGLEDI-AGDAVALAILAGLIGV---AVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFI 287 (368)
T ss_pred HHHHHHHHHHCCCChH-HHHHHHHHHHHHHHHH---HHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHH
Confidence 4567877777788764 5666666666555554 6777776543 33332 3444444444 55555554445555
Q ss_pred HHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHH
Q 014832 132 ILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (417)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~ 211 (417)
.+.+++.....+.. .++.+|. .+.+.+.+..+..... ..+++..+|.+.+.+.. +-+..|.+.++..++.
T Consensus 288 ~l~~~~~~~~~~~~-~~~~~~~----~p~~~rgt~~G~~~~~-g~~~~~~~~~~~~~~~~----~~~~~f~~~~~~~~i~ 357 (368)
T TIGR00903 288 GIAGLLMLPAYAII-MDWIGKF----CDKELHGKAAGAIGFT-SRAISVALALAAMLFIS----SAEAYFTFLAILITIA 357 (368)
T ss_pred HHHHHhhhhhHHHH-HHHHHHh----cchhhcCcccchhhHH-HHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHH
Confidence 66666666665655 5677887 3333333345555555 34445555555554441 4566777777776666
Q ss_pred HHHHH
Q 014832 212 MVIIL 216 (417)
Q Consensus 212 ~~~~~ 216 (417)
.+...
T Consensus 358 ~~~~~ 362 (368)
T TIGR00903 358 FAIAL 362 (368)
T ss_pred HHHHH
Confidence 66554
No 220
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.62 E-value=8.1e-07 Score=80.55 Aligned_cols=166 Identities=14% Similarity=0.075 Sum_probs=114.5
Q ss_pred HHHHhhhhhhhHH--HHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchH
Q 014832 49 MMAGDWLQGPYVY--YLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQY 124 (417)
Q Consensus 49 ~~~~~~~~~~~l~--~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~ 124 (417)
....|+.++...- .+. +++|++..++.++.....+...+++++.|++.||+|.|+++..+.++..+.++ ..+....
T Consensus 262 ~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~ 341 (438)
T COG2270 262 FFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGE 341 (438)
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcccc
Confidence 3345565532221 222 59999999999999999999999999999999999999999999999998888 6666666
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHH
Q 014832 125 KILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAA 204 (417)
Q Consensus 125 ~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~ 204 (417)
..+.+.-.+.|...|.....++ .+..+..++++..+. ++..... .-....++|.+-+.+.+.. .+-|..+...
T Consensus 342 ~~f~i~gll~g~s~G~~qA~SR-Sy~~~lvp~~k~~~f----Fglyalt-gra~S~~gp~lv~v~t~iT-g~~r~g~~~i 414 (438)
T COG2270 342 LDFWILGLLVGTSLGGAQASSR-SYLARLVPKGKEGRF----FGLYALT-GRAASFLGPFLVAVITQIT-GSSRAGVLSI 414 (438)
T ss_pred HHHHHHHHHHHHhcchHHHHHH-HHHHHhCCCccccce----eehhhhh-hhHHHHHHHHHHHHHHHHh-cchhhHHHHH
Confidence 6667777899999999999885 588887333333332 2222222 2333455565555554443 2467777766
Q ss_pred HHHHHHHHHHHHhhcccc
Q 014832 205 ACFLAIGMVIILSSWTEN 222 (417)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~ 222 (417)
.++..+..++.. +.|++
T Consensus 415 ~vll~iGl~~L~-~v~~~ 431 (438)
T COG2270 415 IVLLLIGLLLLL-RVKVP 431 (438)
T ss_pred HHHHHhhHhhEE-eecCC
Confidence 666666665544 55544
No 221
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.60 E-value=5.3e-07 Score=87.43 Aligned_cols=149 Identities=11% Similarity=0.092 Sum_probs=97.7
Q ss_pred HhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCChh---HHHHHHHHHHHHHHHHHHHHHhh-cCCCccchHHH
Q 014832 243 IASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHG---FIFATFMLASMLGSSLASRLMAR-SPPRVESYMQI 318 (417)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~l~~ 318 (417)
.+|+|+-+...+.........++....+.|.|+++..+.+.. .....+........+++|+++|| +||| +.+..
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r--~~~~~ 93 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK--RVIML 93 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH--HHHHH
Confidence 346665333334333444455556666899998775555442 33333333344445689999999 5998 78877
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCccc--ccccccccccch
Q 014832 319 VFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA--RSTIMNFFRIPL 396 (417)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~--r~~~~g~~~~~~ 396 (417)
+..+..++..+..+... +.+...+...+.+++.+...+...++..|.+|+++ |..+.++.+...
T Consensus 94 g~~~~~ig~~l~~~~~~--------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~ 159 (500)
T PRK09584 94 GAIVLAIGYALVAWSGH--------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSI 159 (500)
T ss_pred HHHHHHHHHHHHHHhcc--------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHH
Confidence 77777766555444321 22445566677888888888888899999998653 456788878888
Q ss_pred hHHHHHHHHHh
Q 014832 397 NIFVCVVLYNV 407 (417)
Q Consensus 397 ~~~~~~~~~~~ 407 (417)
|+|..++....
T Consensus 160 ~iG~~~gp~i~ 170 (500)
T PRK09584 160 NIGSFFSMLAT 170 (500)
T ss_pred HHHHHHHHHHH
Confidence 88888776543
No 222
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.60 E-value=1.8e-06 Score=80.64 Aligned_cols=86 Identities=16% Similarity=0.143 Sum_probs=70.0
Q ss_pred cCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCc--hHHHHHHHHHHHHHHhhhhhh
Q 014832 67 YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSP--QYKILMIGRILGGIATSLLFS 143 (417)
Q Consensus 67 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~--~~~~l~~~r~l~G~~~~~~~~ 143 (417)
+|.++.+..+.......+..++.+++.++++|+|+|+++..+.++..++.+ ..+.+ +.+.+++..++.+++.+...+
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~ 346 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANP 346 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccc
Confidence 454555556677777777777799999999999999999999999999988 66655 688888999999999998877
Q ss_pred hHHHHHHhhh
Q 014832 144 AFESWLVAEH 153 (417)
Q Consensus 144 ~~~~~~i~~~ 153 (417)
.. .++++|.
T Consensus 347 l~-wam~~d~ 355 (467)
T COG2211 347 LP-WAMVADT 355 (467)
T ss_pred cc-HHHhcch
Confidence 76 5676665
No 223
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.58 E-value=5.8e-07 Score=80.56 Aligned_cols=210 Identities=17% Similarity=0.108 Sum_probs=133.8
Q ss_pred cchhHHHHHHHHHHHHHHHhhccccccc---CCcCcCCcc-hhHHHHHHH----HHHHHhhhhhhhHHH-HHHhcCCCcc
Q 014832 2 EMFFYLVFGALGAVVAALELSKTNKDRI---NTSSAFNSF-KNNYLLVYS----LMMAGDWLQGPYVYY-LYSTYGFGKG 72 (417)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~l~~-l~~~~g~s~~ 72 (417)
-||.+..++.+.-....+..-+..++++ ++..++.+. +.....+.. ..+....+.-|.++. +.|....+..
T Consensus 227 aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w 306 (464)
T KOG3764|consen 227 APFLVLAIVLLLDGALQLLVIEPTEMDPDSTEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGW 306 (464)
T ss_pred CcHHHHHHHHHHHHHHHHheeCccccCccccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCc
Confidence 3677777777777666666554433322 121111111 111111111 222233344576664 5577775566
Q ss_pred hHHHHHHHHHHHHhhhhccccccccccC--chHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 014832 73 EIGQLFIAGFGSSMLFGTIVGSLADKQG--RKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWL 149 (417)
Q Consensus 73 ~~g~~~s~~~~~~~~~~~~~G~l~Dr~G--rr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~ 149 (417)
++|..+--..+.+.++..+.|.++||++ |-.....+++..+.++. ..+++++.++.+-++..+++.+.......+.+
T Consensus 307 ~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l 386 (464)
T KOG3764|consen 307 EVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTL 386 (464)
T ss_pred ceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhh
Confidence 9999888889999999999999999999 53344445666666666 88899999999988888888776655443322
Q ss_pred --Hhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHH
Q 014832 150 --VAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (417)
Q Consensus 150 --i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~ 216 (417)
+-|. +..+. +.....+.+.... ..+|..++|.+++.+.+.. |++|.-.+.++..++-..+..
T Consensus 387 ~~lvd~rh~s~~--~vYGsVyaIad~a-~sla~a~GP~~gg~iv~~i--GF~wl~~iig~~n~iyapvl~ 451 (464)
T KOG3764|consen 387 GYLVDPRHVSGF--NVYGSVYAIADAA-FSLAYAIGPTFGGSLVEAI--GFEWLMTIIGILNLIYAPVLL 451 (464)
T ss_pred HHhcchhhcccc--ceeeeHHHHHHHH-HHHhhhccccccchheeeh--hHHHHHHHHHHHHHHHHHHHH
Confidence 2222 22211 1334445555544 8888899999999999888 999988888877766655544
No 224
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.57 E-value=7.8e-06 Score=73.63 Aligned_cols=154 Identities=23% Similarity=0.243 Sum_probs=102.0
Q ss_pred hhhhhhHHHHHHhcCCCc--chHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCch--HHHHH
Q 014832 54 WLQGPYVYYLYSTYGFGK--GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQ--YKILM 128 (417)
Q Consensus 54 ~~~~~~l~~l~~~~g~s~--~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~--~~~l~ 128 (417)
....+..+.+.++++.+. .+.++..+...++..+++++.|.++||+|||+.+..+......+.+ ..+..+ .+.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (338)
T COG0477 19 GLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLL 98 (338)
T ss_pred chHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHH
Confidence 344566667777777666 4789999999999999999999999999999888888776555555 666665 89999
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHH
Q 014832 129 IGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (417)
Q Consensus 129 ~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~ 208 (417)
+.|+..|++.+...+.. ..++.|..++ . .......+........++..+++.+++.+......+||..|.......
T Consensus 99 ~~~~~~g~~~~~~~~~~-~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 99 ILRLLQGLGGGGLLPVA-SALLSEWFPE-A--TERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHhhhHHHHHHH-HHHHHHhcCc-h--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 99999999999887877 6688887332 1 111112222111123334444444443333221128999777666554
Q ss_pred HHH
Q 014832 209 AIG 211 (417)
Q Consensus 209 ~~~ 211 (417)
...
T Consensus 175 ~~~ 177 (338)
T COG0477 175 LLL 177 (338)
T ss_pred HHH
Confidence 433
No 225
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.57 E-value=9.7e-08 Score=75.33 Aligned_cols=102 Identities=10% Similarity=0.051 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhcc
Q 014832 289 TFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIF 368 (417)
Q Consensus 289 ~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 368 (417)
...++..++.+..+++.||+||| +.+..+.....+......... +.+...+..++.+++.+..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~--~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~g~~~~~~ 68 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRK--PVLLVGLFIFVLSTAMFALSS---------------NITVLIIARFLQGFGAAFA 68 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchh--HHHHHHHHHHHHHHHHHHHhc---------------cHHHHHHHHHHHHHHHHHH
Confidence 34577889999999999999988 777766666666555544433 5566777788889988888
Q ss_pred chhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 369 WPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 369 ~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
.+....+..|..|+++|+++.++.+...+++..++....
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 107 (141)
T TIGR00880 69 LVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLG 107 (141)
T ss_pred HHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhH
Confidence 899999999999999999999999988888887776543
No 226
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.57 E-value=7.5e-05 Score=70.78 Aligned_cols=267 Identities=11% Similarity=-0.061 Sum_probs=134.9
Q ss_pred HHHHHHhhhhhhhHHHHHHhcCCC-----cchHHHHHHHHHHHHhhh-hccccccccccCchHHHHHHHHHHHHHHH-Hh
Q 014832 47 SLMMAGDWLQGPYVYYLYSTYGFG-----KGEIGQLFIAGFGSSMLF-GTIVGSLADKQGRKRACVTYCLTYILSCI-TK 119 (417)
Q Consensus 47 ~~~~~~~~~~~~~l~~l~~~~g~s-----~~~~g~~~s~~~~~~~~~-~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~ 119 (417)
.+..+...+....+-++.+.+.++ ...+.++.+...+...+. .++.+++++|++|++++-.....+..... ++
T Consensus 13 ~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~ 92 (472)
T TIGR00769 13 FLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFA 92 (472)
T ss_pred HHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHH
Confidence 334444444455565777777663 356788888887777766 88999999999999998887666665554 44
Q ss_pred cC--c--h---------------------------HHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHH
Q 014832 120 HS--P--Q---------------------------YKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFS 168 (417)
Q Consensus 120 ~~--~--~---------------------------~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~ 168 (417)
+. + + .|...+..+...+-.........-.+++|..+. +...+.++
T Consensus 93 ~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~----~qakRfy~ 168 (472)
T TIGR00769 93 FVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTI----DEAKRFYA 168 (472)
T ss_pred HHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH----HHHHHHHH
Confidence 43 1 1 222333333444433333332223456666222 12222333
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhh------ccCCCc----hhHHHHHHHHHHHHHHHHhhccc---cCCC------CCCc
Q 014832 169 KAIFLGNGLVAILSGLFGNLLVDS------FSLGPV----APFDAAACFLAIGMVIILSSWTE---NYGD------PSES 229 (417)
Q Consensus 169 ~~~~~g~~~g~~l~~~~~~~~~~~------~~~gw~----~~f~~~~~~~~~~~~~~~~~~~~---~~~~------~~~~ 229 (417)
... +|.++|.++++.+..++.+. ....|. ..+.+.++...+...+.. ...+ ++++ ++++
T Consensus 169 l~~-~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~k 246 (472)
T TIGR00769 169 LFG-LGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYW-WVNRNVLTDPRSYNPALKEKK 246 (472)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccCCccccchhhcccc
Confidence 322 23555566666655554421 011231 222333333333222222 2111 1111 0011
Q ss_pred hhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCC--Ch----hHHHHHHHHHHHHHHHHHHH
Q 014832 230 KDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI--PH----GFIFATFMLASMLGSSLASR 303 (417)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~g~ 303 (417)
++.+....++.+.++|+|..+.+++...+...+....-..|-... ++.++. +. |......++..++..++.++
T Consensus 247 ~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v-~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~ 325 (472)
T TIGR00769 247 VKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKL-KAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGN 325 (472)
T ss_pred CCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111223457888899999888777665554444333223233222 222211 11 33334445556666677799
Q ss_pred HHhhcCCCccchHHHHHHH
Q 014832 304 LMARSPPRVESYMQIVFVV 322 (417)
Q Consensus 304 l~dr~g~~~~~~l~~~~~~ 322 (417)
+.+|+|-+ ....+.-.+
T Consensus 326 l~~~~Gw~--~~a~i~Pii 342 (472)
T TIGR00769 326 VIRKYGWL--TAALITPLV 342 (472)
T ss_pred HHHHhhHH--HHHHHHHHH
Confidence 99999876 444444333
No 227
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.57 E-value=6.9e-07 Score=83.18 Aligned_cols=126 Identities=17% Similarity=0.084 Sum_probs=88.9
Q ss_pred hHHHHHHHhhhccccCCCCCCC---hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhcc
Q 014832 261 GSMYTFVFLWTPALSPNDEEIP---HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLV 337 (417)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 337 (417)
.........+.|.++++..+.+ .+...+...++..++.++.|++.||+||| +.+..+..+..++.+...+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~~~~~i~~~~~~~~~~-- 89 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR--YTTTLSLLLLAIPCLWAGLAVQ-- 89 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch--HHHHHHHHHHHHHHHHHHHHhh--
Confidence 3333344556776555544443 36777788889999999999999999998 8888877777776665544431
Q ss_pred CCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHH
Q 014832 338 APSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVV 403 (417)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~ 403 (417)
+.+..++..++.|++.+. .+....++.|.+|+++|+++.++.....+++..++
T Consensus 90 ------------~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~ 142 (366)
T TIGR00886 90 ------------SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVA 142 (366)
T ss_pred ------------hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHH
Confidence 224555666777777543 56678899999999999999998876555655444
No 228
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.55 E-value=3e-05 Score=71.33 Aligned_cols=304 Identities=13% Similarity=0.071 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh
Q 014832 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH 153 (417)
Q Consensus 75 g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~ 153 (417)
+.+.-+-.+...+..+.+-++.+|...+.=...+.++..++.+ .+++++.+.=+++-++.+++.|...... -.+.+..
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tf-L~lt~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTF-LSLTHFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHH-HHHHHhc
Confidence 4455555566666666777888988765555666778888888 9999999988888899999888775554 3444433
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCC--CC----
Q 014832 154 NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD--PS---- 227 (417)
Q Consensus 154 ~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~---- 227 (417)
+++. -...+. |.+.++++|+..-..+.+ ...+.|..++....+.++..+..+..+|+++.+ .+
T Consensus 141 ~~~~------l~~wss----GTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~ 209 (402)
T PF02487_consen 141 GKSS------LSAWSS----GTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESES 209 (402)
T ss_pred Cccc------cccccC----CcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCC
Confidence 3221 112222 333333444433333322 311346677776655544433333233321110 00
Q ss_pred --Cchh----H---H----HHHHhHHHHHhcc-chhHHHHHHHHHHHhHHHHHHHhhhccccCCCCCCCh----hHHHHH
Q 014832 228 --ESKD----L---L----TQFRGAAVAIASD-EKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH----GFIFAT 289 (417)
Q Consensus 228 --~~~~----~---~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 289 (417)
+.++ . . ...+..+++-++. |+.+...+-.......-|....-..|...-.....+. ......
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~ 289 (402)
T PF02487_consen 210 EDEAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLL 289 (402)
T ss_pred CCcccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHH
Confidence 0000 0 0 0001112211111 2222233333333333333333333443322112222 333455
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccc
Q 014832 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (417)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 369 (417)
+.++..+++--...+ |+ | + +.+...+..+-+.+..+.....- ..+.|..++.++.-|+.-|..+
T Consensus 290 YQ~GVFISRSS~~~~--ri--r--~-lwils~LQ~~nl~~~~l~s~~~f---------ipsi~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 290 YQLGVFISRSSLPFF--RI--R--R-LWILSLLQVINLVFLLLQSWYRF---------IPSIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred HHHHHhhhhcceeee--eh--h--h-HHHHHHHHHHHHHHHHHHHHHHH---------hhHHHHHHHHHHHHHHhhhHHH
Confidence 666666665433221 22 2 2 22222222222222111110000 0056777777888899989989
Q ss_pred hhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 370 PSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
...+..+.|..|+++|--++|...++-..|..++...
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll 390 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLL 390 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 8889999999999999999999988888877766553
No 229
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.51 E-value=1.4e-05 Score=75.51 Aligned_cols=141 Identities=9% Similarity=0.030 Sum_probs=91.6
Q ss_pred hhhHHHHHHhc--CCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHH
Q 014832 57 GPYVYYLYSTY--GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRIL 133 (417)
Q Consensus 57 ~~~l~~l~~~~--g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l 133 (417)
..+++...++. +.+....+...+.+.....++.++.|++.||+++||++.++.+...+..+ ..+.++... ...-.+
T Consensus 252 ~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~ 330 (410)
T TIGR00885 252 WTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTL 330 (410)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHH
Confidence 34555444444 33444445566667788899999999999999999999999888888888 777776544 556677
Q ss_pred HHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc---c-CCCchhHHHHHHH
Q 014832 134 GGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF---S-LGPVAPFDAAACF 207 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~---~-~gw~~~f~~~~~~ 207 (417)
.|++.+..+|+. ..+..+. .++.+ ..+.+... ..+|..+.|.+.+.+.|.. . .+.+..|++..+.
T Consensus 331 ~glf~s~~fp~i-~sl~~~~~g~~~~-------~~s~~l~~-~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 331 CSAFMSLMFPTI-YGIALKGLGQDTK-------YGAAGLVM-AIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred HHHHHHHHHHHH-HHHHHhhhhhhhh-------hhHHHHHH-HHhccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 888888888877 4454444 22221 11112222 3366677788888877742 1 1466777765443
No 230
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.51 E-value=3.5e-07 Score=63.74 Aligned_cols=77 Identities=14% Similarity=0.156 Sum_probs=69.6
Q ss_pred HhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHH
Q 014832 52 GDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILM 128 (417)
Q Consensus 52 ~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~ 128 (417)
+....+|.+|.+.+|.++|.++.|++.+..++|+.+|.+...++.++..+++.+..+.+...+..+ +++.++++.+.
T Consensus 7 gRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 7 GRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 344558999999999999999999999999999999999999999998889999999999999999 99998877653
No 231
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.47 E-value=3.1e-05 Score=73.39 Aligned_cols=147 Identities=14% Similarity=0.151 Sum_probs=80.1
Q ss_pred hhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-Hh-----cCchHHHHHHH
Q 014832 58 PYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TK-----HSPQYKILMIG 130 (417)
Q Consensus 58 ~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~-----~~~~~~~l~~~ 130 (417)
...|.+. +.+|.++.+.++.......+..++....+++.+|..+++.......+..++.. .. ..++++..++.
T Consensus 239 ~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~ 318 (413)
T PRK15403 239 AVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLG 318 (413)
T ss_pred HhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHH
Confidence 3456444 55799999999988777888888888888876555554443332222222222 11 23344445678
Q ss_pred HHHHHHHhhhhhhhHHHHHHh--hhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHH
Q 014832 131 RILGGIATSLLFSAFESWLVA--EHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFL 208 (417)
Q Consensus 131 r~l~G~~~~~~~~~~~~~~i~--~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~ 208 (417)
.++.++|.+...+.. ....- +..++|...+. .+.....+. ..++..++++.++ +-+.+|...++..
T Consensus 319 ~~l~~~G~~~~~p~~-~~~al~~~~~~~G~a~a~----~~~~~~~~~----~~~~~~~g~~~~~---~~~~~~~~~~~~~ 386 (413)
T PRK15403 319 TSLYAFGIGLIFPTL-FRFTLFSNNLPKGTVSAS----LNMVILMVM----AVSVEIGRWLWFN---GGRLPFHLLAVVA 386 (413)
T ss_pred HHHHHHHHHHHhHHH-HHHHhccCCCCCcHHHHH----HHHHHHHHH----HHHHHHHHHHHHc---CCchHHHHHHHHH
Confidence 888899988887766 32221 11234443322 222222223 3333344444333 5567777666655
Q ss_pred HHHHHHHH
Q 014832 209 AIGMVIIL 216 (417)
Q Consensus 209 ~~~~~~~~ 216 (417)
.+......
T Consensus 387 ~~~~~~~~ 394 (413)
T PRK15403 387 GVIVVFTL 394 (413)
T ss_pred HHHHHHHH
Confidence 54444433
No 232
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.46 E-value=7.1e-06 Score=70.30 Aligned_cols=145 Identities=15% Similarity=0.215 Sum_probs=90.4
Q ss_pred HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhhh-
Q 014832 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSL- 140 (417)
Q Consensus 62 ~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~- 140 (417)
...+.+|+|+.+.+.+.+..+...++.+++.|.++||+|++-..+.+..+..+..=....-+++.=.+...+.|+....
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLsysll 369 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTFLGLSYSLL 369 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHHHHhhhHHHH
Confidence 4558899999999999999999999999999999999999988887766555432212222222233444555655433
Q ss_pred ---hhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcc-CCCchhHHH-HHHHHHHHHHHH
Q 014832 141 ---LFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS-LGPVAPFDA-AACFLAIGMVII 215 (417)
Q Consensus 141 ---~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~-~gw~~~f~~-~~~~~~~~~~~~ 215 (417)
.+|.. +.++.|. +-|. +++..+.+ .++|-.+.|++++.+.+.-. ..|--.|.+ .+.+++....+.
T Consensus 370 AcslWP~v-a~~vpE~-qLGT-------aygf~qsI-qNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil 439 (459)
T KOG4686|consen 370 ACSLWPCV-ASLVPEE-QLGT-------AYGFIQSI-QNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGIL 439 (459)
T ss_pred HHHHhhhh-hhhCCHH-Hhcc-------hHHHHHHH-HhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 45555 4455554 3333 45555555 66666777788887776540 124444444 344444444443
Q ss_pred H
Q 014832 216 L 216 (417)
Q Consensus 216 ~ 216 (417)
+
T Consensus 440 ~ 440 (459)
T KOG4686|consen 440 F 440 (459)
T ss_pred h
Confidence 3
No 233
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.43 E-value=4.7e-05 Score=69.42 Aligned_cols=172 Identities=20% Similarity=0.216 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHHHhhhhhhhHHHHH-HhcCCCcchHHHHHHHHHHHHhhhhcccccccc-ccCchHHHHHHHHHHHHHHH
Q 014832 40 NNYLLVYSLMMAGDWLQGPYVYYLY-STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD-KQGRKRACVTYCLTYILSCI 117 (417)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~l~~l~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~D-r~Grr~~~~~~~~~~~~~~~ 117 (417)
++++...++..+...++-+.+.++- +-+|+|..|...+......+..++-...|++.. |.++|+.-.+++....++..
T Consensus 211 ~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~ 290 (403)
T PF03209_consen 211 RRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFA 290 (403)
T ss_pred hHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Confidence 3444445556666666655555444 779999999999999999999998888888777 67888887788777666644
Q ss_pred ----HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 014832 118 ----TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLV 190 (417)
Q Consensus 118 ----~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~ 190 (417)
.+...+.+.+...-++.|++.|...... -+.+.+. ++.|.+.+.+ +..+..+..+|..++..+-....
T Consensus 291 lii~a~~~~~~~~~~~~~~l~G~g~G~f~vga-ls~mM~lt~~~~aG~~mG~W----GaaQA~A~Glg~~~GG~~~D~~~ 365 (403)
T PF03209_consen 291 LIILAGPLGSPWLFRPGVFLLGLGNGLFTVGA-LSLMMDLTSAGRAGLFMGAW----GAAQAIARGLGTFLGGALRDLVR 365 (403)
T ss_pred HHHHHHhcccchHHHHHHHHHHHhhhHHHHHH-HHHHHhCCCCcchhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445678999999999999999987766 4566666 3344444444 44444444444444443322211
Q ss_pred hhc----cCCCchhHHHHHHHHHHHHHHHH
Q 014832 191 DSF----SLGPVAPFDAAACFLAIGMVIIL 216 (417)
Q Consensus 191 ~~~----~~gw~~~f~~~~~~~~~~~~~~~ 216 (417)
... ..+|..+|.+.++..+++..+..
T Consensus 366 ~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 366 ALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 111 12567788888877777666654
No 234
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.43 E-value=3.9e-06 Score=80.68 Aligned_cols=123 Identities=19% Similarity=0.120 Sum_probs=86.7
Q ss_pred HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcC----------chHHHHHHHHHH
Q 014832 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHS----------PQYKILMIGRIL 133 (417)
Q Consensus 65 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~----------~~~~~l~~~r~l 133 (417)
+++|.++.+.|.+.....++..++....+++.+|++.|+++.++.++.+++.+ .... ++.+.+...-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 57899999999999999999999999999999999999999999999988876 4311 334455566788
Q ss_pred HHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Q 014832 134 GGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSF 193 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~ 193 (417)
.+++.+...... ..++.+..+++. ..+.+++...+ .++|..+++.+++.+.+..
T Consensus 361 ~~~~~g~~~~~~-~~~~~~~~p~~~----egt~~al~~s~-~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 361 AEVLAQLKFMPF-LVLLARLCPSGC----ESSVFALLASI-LHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHHHccH-HHHHHHhCCCCc----eehHHHHHHHH-HHHHHHHHHHHHHHHHHHc
Confidence 888888877777 667777733222 12233333333 3444455555555555444
No 235
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.41 E-value=1.4e-06 Score=77.77 Aligned_cols=106 Identities=16% Similarity=0.120 Sum_probs=83.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHH
Q 014832 283 HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (417)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (417)
.|.+.+.+.+...+.++.+|.++||+||| ..+..+....++...+..... +...+++.=++.|
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRk--pvll~c~~~va~s~ll~~~S~---------------~F~afv~aR~l~G 132 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRK--PVLLACLIGVALSYLLWALSR---------------NFAAFVLARFLGG 132 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCch--HHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHhhh
Confidence 47788899999999999999999999999 666666666666555544444 4433444456677
Q ss_pred HhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 363 ACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
+..+. .....++++|++++|.|+.+++...+++++|-++|+.+
T Consensus 133 i~kgn-l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmI 175 (451)
T KOG2615|consen 133 IFKGN-LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMI 175 (451)
T ss_pred hccCc-hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchh
Confidence 77665 57788999999999999999999999999887777654
No 236
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.38 E-value=1.1e-06 Score=60.79 Aligned_cols=65 Identities=22% Similarity=0.205 Sum_probs=55.3
Q ss_pred HHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHH
Q 014832 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY 112 (417)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~ 112 (417)
+.....+...|++|...++.|+|+.|+|.+.++..+...++.+++|.++||+++++..+......
T Consensus 11 ~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 11 FYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 33444555678998888899999999999999999999999999999999999999887765543
No 237
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.35 E-value=1.8e-06 Score=80.33 Aligned_cols=162 Identities=17% Similarity=0.169 Sum_probs=124.8
Q ss_pred HHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHH
Q 014832 48 LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKI 126 (417)
Q Consensus 48 ~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~ 126 (417)
++.+..++...++-.-.||++-.+...|........+-.+.-++.+++.+|+|+-+++..++....+=.+ ....+|.|.
T Consensus 382 ~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~ 461 (618)
T KOG3762|consen 382 VMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWM 461 (618)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchh
Confidence 4444445555666455588998888888777777788888888999999999999999999999999888 999999999
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHH
Q 014832 127 LMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAAC 206 (417)
Q Consensus 127 l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~ 206 (417)
.+-.-+++|+..+..+.+. .+++++..+++.....+....+... ++|--+|.++++.+.+.+ +-|..|.+.++
T Consensus 462 vLPieilqgit~aliWaa~-~sY~s~vaPp~l~at~Q~l~~g~f~----GlG~g~GslIGG~~v~~f--g~~ttf~~~gi 534 (618)
T KOG3762|consen 462 VLPIEILQGITHALIWAAI-ISYASHVAPPGLRATAQGLLQGIFH----GLGKGLGSLIGGFVVERF--GARTTFRIFGI 534 (618)
T ss_pred eeeHHHHHHHHHHHHHHHH-HHHHHhhCCCcchHHHHHHHHHHhc----ccCcchhhhhhhhhheee--hhHHHHHHHHH
Confidence 9999999999999999998 6799888666555544444444444 444455556666666767 88999998887
Q ss_pred HHHHHHHHHH
Q 014832 207 FLAIGMVIIL 216 (417)
Q Consensus 207 ~~~~~~~~~~ 216 (417)
.+++..++..
T Consensus 535 Acl~~l~~~~ 544 (618)
T KOG3762|consen 535 ACLVTLALFI 544 (618)
T ss_pred HHHHHHHHHH
Confidence 7766655543
No 238
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.34 E-value=5.4e-07 Score=82.43 Aligned_cols=106 Identities=13% Similarity=0.173 Sum_probs=93.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHH
Q 014832 282 PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTF 361 (417)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 361 (417)
..|.+...+.+..++.+++.|++.||++|+ +.+.++..+-.++.+...+.. ..|.+.+.=.+.
T Consensus 69 ~~Gll~~vf~v~~~i~sPl~gyLadryNR~--~v~~vG~~iW~~Av~~~~fs~---------------~Fwq~~l~R~~v 131 (493)
T KOG1330|consen 69 ELGLLQTVFIVVFMIASPLFGYLADRYNRK--RVIAVGIFIWTLAVFASGFSN---------------HFWQVLLCRGFV 131 (493)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHhhcCcc--eEEeeHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHh
Confidence 458888999999999999999999999998 888888888877777766665 778899999999
Q ss_pred HHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHH
Q 014832 362 EACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVL 404 (417)
Q Consensus 362 g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~ 404 (417)
|+|...+.|..+++++|.+|+++|++++++++.+.++|..+|.
T Consensus 132 GiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~ 174 (493)
T KOG1330|consen 132 GIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGY 174 (493)
T ss_pred ccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeE
Confidence 9999999999999999999999999999999988888766554
No 239
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.33 E-value=3.8e-06 Score=78.37 Aligned_cols=108 Identities=8% Similarity=-0.075 Sum_probs=95.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHH
Q 014832 283 HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (417)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (417)
.|.+...+..+..+..+++|+++||+|.| +.+..+.+...+...+..+.. +...+.+.-++.|
T Consensus 64 ~G~I~s~F~ysYal~qIp~GlLaDrlG~K--~vL~l~~l~Wsl~t~L~~fa~---------------Sl~~L~i~R~llG 126 (511)
T TIGR00806 64 TNEIIPVLPYSHLAVLVPVFLLTDYLRYK--PVLVLQALSFVCVWLLLLLGT---------------SVWHMQLMEVFYS 126 (511)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCch--HHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHH
Confidence 47788888999999999999999999988 888888888887777777766 6678888899999
Q ss_pred HhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhc
Q 014832 363 ACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVC 408 (417)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~ 408 (417)
++.+..+ ....++.+.+|+++|+++.|+.+.+.++|..++.....
T Consensus 127 vaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~q 171 (511)
T TIGR00806 127 VTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQ 171 (511)
T ss_pred HHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988 99999999999999999999999999999888876543
No 240
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.23 E-value=8.1e-05 Score=67.41 Aligned_cols=146 Identities=14% Similarity=0.110 Sum_probs=104.9
Q ss_pred hhhhhHHHHHHh-cCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHH
Q 014832 55 LQGPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRI 132 (417)
Q Consensus 55 ~~~~~l~~l~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~ 132 (417)
....+++...+| .|.++.+.+...+.+..+..+|...+-++..|+...|.+.+..+...+.++ .++.++...+. .-+
T Consensus 254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~~-~l~ 332 (422)
T COG0738 254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVALY-ALF 332 (422)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHHH-HHH
Confidence 446677766655 888999999999999999999999999999999999999998887777777 88888865544 447
Q ss_pred HHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHH
Q 014832 133 LGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIG 211 (417)
Q Consensus 133 l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~ 211 (417)
+.|+..+..+|+. .++..+. .+... ..+..... ..+|+.+-|.+.+++.|.. |-...+.....++.+.
T Consensus 333 ~ig~F~simfPTI-fslal~~l~~~ts-------~~s~~l~m-aivGGAiiP~l~G~i~d~~--g~~~~~~~~pllc~ly 401 (422)
T COG0738 333 LIGLFNSIMFPTI-FSLALKNLGEHTS-------VGSGLLVM-AIVGGAIIPPLQGVIADMF--GIQLTFLIVPLLCYLY 401 (422)
T ss_pred HHHHHhHHHHHHH-HHHHHhccCcccc-------ccceeeee-heecchHHHHHHHHHHHhh--hhHHHHHHHHHHHHHH
Confidence 8899999999988 5454443 21111 11112222 5667788888999998887 7766666444444433
Q ss_pred H
Q 014832 212 M 212 (417)
Q Consensus 212 ~ 212 (417)
.
T Consensus 402 V 402 (422)
T COG0738 402 V 402 (422)
T ss_pred H
Confidence 3
No 241
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.16 E-value=3.4e-06 Score=74.96 Aligned_cols=130 Identities=11% Similarity=0.077 Sum_probs=87.1
Q ss_pred HHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchH----HHHHHHHHHHHHHhhhhhhhHHHHHHhhhccc
Q 014832 82 FGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQY----KILMIGRILGGIATSLLFSAFESWLVAEHNKR 156 (417)
Q Consensus 82 ~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~----~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r 156 (417)
.+.-..|.++.+++.||+|||+.|..+.+++++..+ ...+.+- .++..+|++.. +.+.++ +.|..|.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis----g~fqva-YvYtPEV--- 462 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS----GAFQVA-YVYTPEV--- 462 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh----chheEE-EEecCcc---
Confidence 345566777999999999999999999999999888 5555433 23444555443 334444 5677777
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhccccCCC
Q 014832 157 GFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTENYGD 225 (417)
Q Consensus 157 ~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 225 (417)
++...+..+.+.+... .-+|+++.|+++ +.... +-..+..+.+..++++.+...+..-|++++
T Consensus 463 -yPTavRatgvGtcSsm-aRIggI~~p~iA--~~~e~--s~sl~i~vy~~~~ilagIavcffPiEtkGR 525 (528)
T KOG0253|consen 463 -YPTAVRATGVGTCSSM-ARIGGIFSPVIA--MRAEL--STSLPIFVYGALFILAGIAVCFFPIETKGR 525 (528)
T ss_pred -cchhhhhcchhhhhhH-HhhhhhhhhHHH--HHhcc--ceeehHHHHHHHHHHHHHHheeeeeccCCC
Confidence 6666666677777777 778889999888 22222 444566666666666666655344455544
No 242
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.09 E-value=0.00013 Score=64.50 Aligned_cols=307 Identities=13% Similarity=0.057 Sum_probs=167.0
Q ss_pred HhcCCCcchHH-HHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhh
Q 014832 65 STYGFGKGEIG-QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLF 142 (417)
Q Consensus 65 ~~~g~s~~~~g-~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~ 142 (417)
.+.+++..|+. -+.-+..-.+.+.-.+.=.+.|..-.|++++.-.+....... ..+.++.+.+=+.-+..|...+..
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaE- 112 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAE- 112 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHH-
Confidence 45566666553 112222222333333555578988889988887777777777 888899988888888888876655
Q ss_pred hhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhcccc
Q 014832 143 SAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSWTEN 222 (417)
Q Consensus 143 ~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 222 (417)
.+- ++++-+.-+++.+.+..+ --......|. ..+..++..+.+....+++..=.+.-....++..+.. +.|..
T Consensus 113 IAY-ysYIYs~Vd~~~Yqrvt~-y~RaA~L~g~----~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~-fLP~v 185 (433)
T KOG3810|consen 113 IAY-YSYIYSKVDPEMYKRVTG-YCRAAFLVGK----FVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLAL-FLPRV 185 (433)
T ss_pred Hhh-hheeeeecCHHHHHHHHH-HhHHHHHHHh----HHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHh-hCCCC
Confidence 333 445544322222221111 1112223333 3333444444332211333333333333333333333 33332
Q ss_pred CC-------CCC-------C--chhH-H-------HHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCC
Q 014832 223 YG-------DPS-------E--SKDL-L-------TQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND 278 (417)
Q Consensus 223 ~~-------~~~-------~--~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (417)
++ +++ + .+.+ . ....+.+++..+||+.+...+...+.....+ -..+|....-++.
T Consensus 186 ~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~-QV~nY~Q~LW~~~ 264 (433)
T KOG3810|consen 186 KRSLYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYY-QVTNYTQILWKEV 264 (433)
T ss_pred chhhhhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhH-HHHHHHHHHHHhh
Confidence 21 000 0 0000 0 1112344556677877777666655443333 3444454444442
Q ss_pred CCCC----hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHH
Q 014832 279 EEIP----HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQ 354 (417)
Q Consensus 279 ~~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (417)
.+.+ .|..=++..+.++++.+..|.+.-+..|.+...+.++....+.+++.+.... +.|+.
T Consensus 265 ~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~---------------~Iw~~ 329 (433)
T KOG3810|consen 265 APNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQ---------------HIWVC 329 (433)
T ss_pred CCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhccc---------------ceehh
Confidence 1211 2555566667788888888988766544423344444444433333333333 67888
Q ss_pred HHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccc
Q 014832 355 LLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIP 395 (417)
Q Consensus 355 ~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~ 395 (417)
.+..+++...+....+.....+++...+|.-|..+|+.+..
T Consensus 330 Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 330 YAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFV 370 (433)
T ss_pred hhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHH
Confidence 99999999999988888888899999999999999975553
No 243
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.08 E-value=9e-05 Score=70.57 Aligned_cols=155 Identities=17% Similarity=0.152 Sum_probs=94.7
Q ss_pred hhhhHH-HHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCc--------hHH-HHHHHHHHHHHHH-HhcCchH
Q 014832 56 QGPYVY-YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR--------KRA-CVTYCLTYILSCI-TKHSPQY 124 (417)
Q Consensus 56 ~~~~l~-~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Gr--------r~~-~~~~~~~~~~~~~-~~~~~~~ 124 (417)
...++| ++.+-+|.+..+.|++.++.++...+..+++|.++||.-+ ||. =.++....++..+ .++.++.
T Consensus 277 l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~ 356 (466)
T KOG2532|consen 277 LLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDE 356 (466)
T ss_pred HHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCC
Confidence 367788 5557799999999999999999999999999999998744 232 3334555566566 6666532
Q ss_pred HH-HHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh-ccCCCchhHH
Q 014832 125 KI-LMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDS-FSLGPVAPFD 202 (417)
Q Consensus 125 ~~-l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~-~~~gw~~~f~ 202 (417)
.. ..+.-...+.+..+..... -+..... +.++.....+++.+.. ..+...++|.+.+.+.+. ....||.+|+
T Consensus 357 ~~~~a~~~l~~~~~~~g~~~~G--f~~~~~~---~apq~a~~l~g~~~~~-~~~~~~~~P~~vg~~~~~~t~~eW~~VF~ 430 (466)
T KOG2532|consen 357 HRLLAVILLTIAIGLSGFNISG--FYKNHQD---IAPQHAGFVMGIINFV-GALAGFIAPLLVGIIVTDNTREEWRIVFL 430 (466)
T ss_pred cchHHHHHHHHHHHHcccchhh--hHhhhhh---ccchHHHHHHHHHHHH-HHHHHHHHHHheeeEeCCCCHHHHHHHHH
Confidence 11 1111122222222221211 0111111 1233344455666666 667778888888877731 1137999999
Q ss_pred HHHHHHHHHHHHHH
Q 014832 203 AAACFLAIGMVIIL 216 (417)
Q Consensus 203 ~~~~~~~~~~~~~~ 216 (417)
+.+++.++..++..
T Consensus 431 i~a~i~~~~~i~f~ 444 (466)
T KOG2532|consen 431 IAAGILIVGNIIFL 444 (466)
T ss_pred HHHHHHHHhchhee
Confidence 99988777765433
No 244
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.07 E-value=3.9e-05 Score=71.41 Aligned_cols=149 Identities=13% Similarity=0.102 Sum_probs=104.6
Q ss_pred HhccchhHHHHHHHHHHHhHHHHHHHhhhccccCC----CCCCChhHHHH---HHHHHHHHHHHHHHHHHhhc-CCCccc
Q 014832 243 IASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN----DEEIPHGFIFA---TFMLASMLGSSLASRLMARS-PPRVES 314 (417)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~-g~~~~~ 314 (417)
.+++|+-+...+..=+..=..|+....-+..|+.. +.+.+.+.... .+..-.-+..+++|+++||+ |+| +
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~--~ 93 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR--R 93 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh--H
Confidence 45566655444444344433344444444445444 33355544443 34444556788999999996 877 8
Q ss_pred hHHHHHHHHHHHHHHHHHHh-hccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcc--cccccccc
Q 014832 315 YMQIVFVVSSVSLLLPIVTS-FLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEE--ARSTIMNF 391 (417)
Q Consensus 315 ~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~--~r~~~~g~ 391 (417)
.+..+.++..++.+++.... . ....+.+.+.+.+++.|..=|...+++.|.+|++ +|-.++++
T Consensus 94 tI~lGail~~iGh~~L~~~~~~--------------~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~ 159 (498)
T COG3104 94 TIVLGAILMAIGHLVLAISSVS--------------GPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTL 159 (498)
T ss_pred HHHHHHHHHHHHHHHHhccccc--------------cccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccE
Confidence 88888888888887776653 1 3467788888889999999999999999999875 46667999
Q ss_pred cccchhHHHHHHHHHh
Q 014832 392 FRIPLNIFVCVVLYNV 407 (417)
Q Consensus 392 ~~~~~~~~~~~~~~~~ 407 (417)
+.++-|+|+.++++..
T Consensus 160 fY~~iNiGsl~~p~i~ 175 (498)
T COG3104 160 FYMGINIGSLIAPIIT 175 (498)
T ss_pred EEEEeehHHHHHHHHH
Confidence 9999999999888754
No 245
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.07 E-value=0.0019 Score=58.15 Aligned_cols=335 Identities=12% Similarity=0.023 Sum_probs=146.9
Q ss_pred hhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccc-----ccCchHHHHH------HHHHHHHHHH--Hhc
Q 014832 54 WLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD-----KQGRKRACVT------YCLTYILSCI--TKH 120 (417)
Q Consensus 54 ~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~D-----r~Grr~~~~~------~~~~~~~~~~--~~~ 120 (417)
+++. .+|.+.+.-|.|.++.+....+ +..+.+ -+.+.++.| |+||||..++ |..+..++.. -..
T Consensus 48 GL~~-~iP~lL~ak~vSyt~~a~fS~a-y~P~sL-KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~ 124 (510)
T KOG3574|consen 48 GLIG-AIPLLLQAKGVSYTSQAIFSFA-YWPFSL-KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGL 124 (510)
T ss_pred hHhh-hhHHHhcCCCcchhhhhhhhhh-hhHHHH-HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCccc
Confidence 3444 7777778788888888754333 322222 347888899 9999986433 3333322222 111
Q ss_pred C-----chHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhcc
Q 014832 121 S-----PQYKILMIGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGN-LLVDSFS 194 (417)
Q Consensus 121 ~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~-~~~~~~~ 194 (417)
. ++...+...-++.-+..+....+.+.+-+.-.++.. .+..++...++...|+.+|..+--.+-. .....+.
T Consensus 125 g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~--lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~ 202 (510)
T KOG3574|consen 125 GGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN--LGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYL 202 (510)
T ss_pred ccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh--cCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHH
Confidence 1 222333333455556666665555443333332221 2223334444444444333332111111 1111111
Q ss_pred CCCc---------hhHHHHHHHHHHHHHHHHhhccccCCCC--CCchhHHHHHHhHHHHHhccchhHHHHHHHHHHHhHH
Q 014832 195 LGPV---------APFDAAACFLAIGMVIILSSWTENYGDP--SESKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSM 263 (417)
Q Consensus 195 ~gw~---------~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (417)
.+|. ...++.+.+..++-.+.. .++++++.+ +|.+....+..+-++++++-|....+.......-...
T Consensus 203 rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~-~~kke~~~~~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf 281 (510)
T KOG3574|consen 203 RSIPLDQGFITLAGYLWFWGALFIVATTLVA-LLKKENDESVDEELELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGF 281 (510)
T ss_pred hcCcCccceEEhhHHHHHHHHHHHHHHHHHH-HhcCCCchhhhhhhhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHh
Confidence 1222 123334444444433333 222222211 1222222333345566777677665555443332222
Q ss_pred HHHHHhhhccccCC-CCCCCh-hHHHHHHHHHHHHHHHHHHHHHhhcCCCcc----chHHHHHHHHHHHHHHHHHHhhcc
Q 014832 264 YTFVFLWTPALSPN-DEEIPH-GFIFATFMLASMLGSSLASRLMARSPPRVE----SYMQIVFVVSSVSLLLPIVTSFLV 337 (417)
Q Consensus 264 ~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~----~~l~~~~~~~~~~~~~~~~~~~~~ 337 (417)
. ......+.-+.+ +.+.+. +.......-.+++.....|++..+ .|+. |.+..-.....+...+....+...
T Consensus 282 ~-a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~--~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~ 358 (510)
T KOG3574|consen 282 Q-AADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAG--PRPLNVFLKAVPYRLGGGLVQTALVWWTPTLG 358 (510)
T ss_pred h-hhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCC--CCcchHHHHhhhHHHHHHHHHHHHHhhhcccc
Confidence 2 222223333322 333221 222211122333444334433332 1211 111112222222223333333222
Q ss_pred CCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHH
Q 014832 338 APSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFV 400 (417)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~ 400 (417)
.+ ++.-........+....+........+...++..+++.|+...|+.|.+.+...|+|+
T Consensus 359 ~~---~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg 418 (510)
T KOG3574|consen 359 HS---DGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGG 418 (510)
T ss_pred cC---CCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcC
Confidence 10 0000000112223334555555555667788899999999999999999998888864
No 246
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.07 E-value=1.5e-05 Score=75.93 Aligned_cols=153 Identities=10% Similarity=0.034 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhccccCC-CCCC-ChhHHHHHHHHHHHHHHHHHHHHHh----hcCCCccchHHHHH-HH
Q 014832 250 ALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEI-PHGFIFATFMLASMLGSSLASRLMA----RSPPRVESYMQIVF-VV 322 (417)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d----r~g~~~~~~l~~~~-~~ 322 (417)
..++......|.. +.....+.+.|+++ +.+. ..+.+..+..+.+++..++.|+++| |+||| |..+... ..
T Consensus 7 i~~~~~~~Giq~~-~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR--rp~il~g~~~ 83 (477)
T TIGR01301 7 LRVASVAAGVQFG-WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR--RPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh--HHHHHHHHHH
Confidence 3333333333433 33455567777755 3222 2356666777889999999999999 59988 7666543 33
Q ss_pred HHHHHHHHHHHhhccCC--CCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccc--cccccccccchhH
Q 014832 323 SSVSLLLPIVTSFLVAP--SNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEAR--STIMNFFRIPLNI 398 (417)
Q Consensus 323 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r--~~~~g~~~~~~~~ 398 (417)
..+++.++.+....... .+.+..+..+..+..++.+.+..+..+...+...+++.|..|+++| +.+.++.+...++
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~l 163 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAI 163 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHH
Confidence 33433333332210000 0000111111123445555566677787788889999999999866 5688888777888
Q ss_pred HHHHHHH
Q 014832 399 FVCVVLY 405 (417)
Q Consensus 399 ~~~~~~~ 405 (417)
|+.++..
T Consensus 164 G~ilg~~ 170 (477)
T TIGR01301 164 GNVLGYA 170 (477)
T ss_pred HHHHHHH
Confidence 8777765
No 247
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.05 E-value=7.5e-06 Score=81.50 Aligned_cols=123 Identities=10% Similarity=0.036 Sum_probs=91.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCC---------------------
Q 014832 282 PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPS--------------------- 340 (417)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 340 (417)
+.|.+.+.+.++..++.++.+++.||.+|| +.+..+.++.+++.++..+.+....++
T Consensus 69 ~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~--~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~ 146 (633)
T TIGR00805 69 SSGLINGSYEIGNLLLIIFVSYFGTKLHRP--IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCM 146 (633)
T ss_pred cceeeeehhhHHHHHHHHHHHHhhcccCcc--eEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccccccccc
Confidence 457888889999999999999999999988 888888888777776665543111000
Q ss_pred --------------CCCCCCc-ccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHH
Q 014832 341 --------------NVKSGGI-SFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 341 --------------~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
+++.... ......++++-++.|++.+..++...+++.|.+|+++|+.+.|+......+|..+|..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~l 226 (633)
T TIGR00805 147 ENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYL 226 (633)
T ss_pred CCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHH
Confidence 0000000 1123456678899999999999999999999999999999999988888877776654
Q ss_pred H
Q 014832 406 N 406 (417)
Q Consensus 406 ~ 406 (417)
.
T Consensus 227 l 227 (633)
T TIGR00805 227 L 227 (633)
T ss_pred H
Confidence 3
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=98.05 E-value=3e-05 Score=75.55 Aligned_cols=122 Identities=12% Similarity=-0.034 Sum_probs=82.8
Q ss_pred HhhhccccCCCCCCChhHHHHHHHH--HHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 014832 268 FLWTPALSPNDEEIPHGFIFATFML--ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSG 345 (417)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (417)
..+.|.. ++.++.+...+..+..+ ......++.|++.||+|+| +.+.++..+..++.++..+... +
T Consensus 47 sv~s~~L-~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R--~vllig~ll~~iG~ll~ala~~---------~ 114 (591)
T PTZ00207 47 NLISGAM-QARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPR--PIFVLSMTVFCLGTLLFALTFQ---------E 114 (591)
T ss_pred HHHHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHhc---------c
Confidence 3345544 33445544333322222 2234556789999999998 8888888888877776665421 0
Q ss_pred CcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHH
Q 014832 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCV 402 (417)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~ 402 (417)
....+.+.+.+..++.|++.+...+.....+.+.+| ++||++.|+.....+++..+
T Consensus 115 ~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI 170 (591)
T PTZ00207 115 VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAI 170 (591)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHH
Confidence 000155667777888888888777888888899887 66899999999988888764
No 249
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.03 E-value=1.3e-05 Score=78.27 Aligned_cols=103 Identities=18% Similarity=0.210 Sum_probs=93.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHH
Q 014832 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (417)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (417)
+++.+...++..++.++.|+++|++||| +.+..+.....++.++..... +...+.++-++.|+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk--~~l~~~~~~~~iG~ii~~~a~---------------~~~~l~~GR~l~G~ 154 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRK--KTLLLAVVLFLIGAIIIALAP---------------SWYQLIVGRILTGL 154 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHHHHHHHHHHHHhh---------------hHHHHHHHHHHhcc
Confidence 6777888999999999999999999999 888888888888888877777 77888999999999
Q ss_pred hhhccchhHHHHHhhcCCcccccccccccccchhHHHHHH
Q 014832 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVV 403 (417)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~ 403 (417)
+.|........+.+|..|++.||...+......++|..++
T Consensus 155 g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~ 194 (513)
T KOG0254|consen 155 GVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG 194 (513)
T ss_pred chhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888887777
No 250
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.98 E-value=5.3e-05 Score=73.52 Aligned_cols=105 Identities=14% Similarity=0.161 Sum_probs=80.9
Q ss_pred ccccCC-CCCCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccc
Q 014832 272 PALSPN-DEEIPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFS 350 (417)
Q Consensus 272 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (417)
+....+ +.+....++.....++..++.++.|+++|.+||| ..++.+..+..++.++..... +
T Consensus 68 ~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr--~~~i~g~~l~vvG~Iv~atA~---------------~ 130 (599)
T PF06609_consen 68 PYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRR--YFFIIGSLLGVVGSIVCATAQ---------------N 130 (599)
T ss_pred HHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcch--HHHHHHHHHHHhHHHHhhcCC---------------c
Confidence 333444 4444556777778889999999999999999999 888888888877777766655 6
Q ss_pred hhHHHHHHHHHHHhhhccchhHHHHHhhcCCccccccccccccc
Q 014832 351 GSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI 394 (417)
Q Consensus 351 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~ 394 (417)
...++.+..+.|++.|... .....++|..|.+.|..+.++...
T Consensus 131 ~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~ 173 (599)
T PF06609_consen 131 MNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASI 173 (599)
T ss_pred HHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHH
Confidence 6788899999999877644 456668999999999887765544
No 251
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.90 E-value=0.00056 Score=54.50 Aligned_cols=77 Identities=19% Similarity=0.185 Sum_probs=64.8
Q ss_pred HHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh
Q 014832 76 QLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH 153 (417)
Q Consensus 76 ~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~ 153 (417)
.-.++.+....+..++.+.+.+++|.|+.++++.+.+.+-...-+-++.+.++.+-++.|++.+..+++. ..++.+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aq-g~ylt~~ 117 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQ-GTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhh-hHHHHHc
Confidence 3455666777788888889999999999999999999876554456778899999999999999999987 7788887
No 252
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.88 E-value=6.7e-05 Score=68.95 Aligned_cols=110 Identities=7% Similarity=-0.033 Sum_probs=79.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHH
Q 014832 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (417)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (417)
+.+.....++.++|++..|++.||+||| +..-...+++.++.++......... ...-.+.+...=++.|+
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK--~vYG~~liImIi~t~~~~~s~~~~~--------~~~~m~~L~~~R~~LGi 156 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRK--KVYGKELIIMIICSALSGLSVGTTS--------PLGVMMTLCFFRFLLGI 156 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcch--hhhhHHHHHHHHHHHHhccCCCCCC--------CcchhhHHHHHHHHhhc
Confidence 4555666789999999999999999999 7776666666666653333321111 00022445555678899
Q ss_pred hhhccchhHHHHHhhcCCcccccccccccccchhHHHHHH
Q 014832 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVV 403 (417)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~ 403 (417)
+.|.-+|...+..+|....+.||+-.+..-..++.+...|
T Consensus 157 GIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 157 GIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred cccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999999999999999998777666666654443
No 253
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.83 E-value=5.6e-05 Score=74.05 Aligned_cols=92 Identities=10% Similarity=0.037 Sum_probs=82.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHH
Q 014832 283 HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (417)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (417)
.....+++.++.++|.++.|.++||+||| +.+..+..+..++.+...+.+ +.+...+.-++.|
T Consensus 120 ~~~~~s~~~~G~~vG~~i~g~lsD~~GRk--~~~~~~~~~~~i~~~~~a~a~---------------~~~~~~~~Rfl~G 182 (521)
T KOG0255|consen 120 VALGQSLFFLGVLVGSLIFGPLSDRFGRK--PVLLVSLLLFIIFGILTAFAP---------------NYWMFLIFRFLSG 182 (521)
T ss_pred HHHHHHHHHHHHHHHHhhheehHhhcccH--HHHHHHHHHHHHHHHHHHHhC---------------cHHHHHHHHHHHH
Confidence 35566788899999999999999999999 888888888888887777776 7888999999999
Q ss_pred HhhhccchhHHHHHhhcCCcccccccccc
Q 014832 363 ACVGIFWPSIMKMRSQYIPEEARSTIMNF 391 (417)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~ 391 (417)
++.+........+..|.++++.|+.+..+
T Consensus 183 ~~~~~~~~~~~~~~~E~~~~~~R~~~~~~ 211 (521)
T KOG0255|consen 183 FFGSGPLTVGFGLVAEIVSPKQRGLALTL 211 (521)
T ss_pred hhccchhHHhHhhheeecCcchhhHHHHH
Confidence 99999999999999999999999999988
No 254
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.70 E-value=0.0011 Score=61.90 Aligned_cols=108 Identities=16% Similarity=0.218 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHH-HhcC---c------hHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cccchhhhHHHHHHHHHH
Q 014832 103 RACVTYCLTYILSCI-TKHS---P------QYKILMIGRILGGIATSLLFSAFESWLVAEH-NKRGFEQQWLSITFSKAI 171 (417)
Q Consensus 103 ~~~~~~~~~~~~~~~-~~~~---~------~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~r~~~~~~~~~~~~~~~ 171 (417)
|++.++.+++.+|.+ ..++ + +.+.+.++..+.++|.|+.-|.. ..+.+|. +++. .+.....++...
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni-~~~~~dq~~~~~--~~~~~~~F~~fY 78 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNI-SPFGADQYDEDD--DSRRDSFFNWFY 78 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHH-HHHHHHCSSTTT--TTHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccH-HHHHHHHhcccc--hhhhhhhHHHHH
Confidence 456677777777665 3332 1 23678888999999999999988 6788887 3332 222333444444
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHH
Q 014832 172 FLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIIL 216 (417)
Q Consensus 172 ~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~ 216 (417)
.. .++|..++..+..++-++. ||.+.|.+.++..+++.+...
T Consensus 79 ~~-in~G~~~~~~~~~~i~~~~--~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 79 WG-INIGSLFSPTLVPYIQQNY--GWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HH-HHHHHHHHHHCCCHHHHCS---HHHHHHHHHHHHHHHHHHHH
T ss_pred HH-HhhhhHhhcccchhhcccc--chhhhhhHHHHHHHHHHHHHH
Confidence 44 7777788888888887777 999999999988877776655
No 255
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.56 E-value=3.6e-06 Score=80.86 Aligned_cols=109 Identities=12% Similarity=0.140 Sum_probs=88.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHH
Q 014832 284 GFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEA 363 (417)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 363 (417)
+...+...++..+|.++.|+++||+||| +.+..+..+..++.++..+.+.. .+.+.+.++-++.|+
T Consensus 49 ~~~~~~~~~g~~~G~~~~g~~~d~~GRk--~~~~~~~~~~~i~~~~~~~~~~~------------~~~~~~~~~R~~~G~ 114 (451)
T PF00083_consen 49 SLLTSSFFIGAIVGALIFGFLADRYGRK--PALIISALLMIIGSILIAFAPSY------------NNFWMLLIGRFLIGF 114 (451)
T ss_pred HHHHHHHHhhhccccccccccccccccc--ccccccccccccccccccccccc------------ccccccccccccccc
Confidence 5666778889999999999999999999 88888777777766665554411 034667778889999
Q ss_pred hhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 364 CVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 364 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
+.|...+....++.|..|++.|+...++.+....+|..++...
T Consensus 115 ~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~ 157 (451)
T PF00083_consen 115 GIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLI 157 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999998888877666543
No 256
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.55 E-value=0.017 Score=54.91 Aligned_cols=117 Identities=15% Similarity=0.129 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHh
Q 014832 285 FIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEAC 364 (417)
Q Consensus 285 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 364 (417)
..+..++++..+|+.+..+..- .++|. +.+.+....=.+..-+..+... . + +...+..-.+.+..++.++++|+.
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~~-p~~~~-~~l~i~s~~R~iFIPlf~lcn~-~-~-~~~~p~~~~~d~~~~~~~~l~glt 385 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFMW-PDEDS-RWLPILSFLRVLFIPLFLLCNY-P-Q-RSRLPVFFPGDAYFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeEe-eCCCc-cchHHHHHHHHHHHHHHHHhcC-C-c-cccCCeeecccHHHHHHHHHHHHh
Confidence 4456788899999986654311 11221 2333333333222222222111 0 0 000000111346677789999999
Q ss_pred hhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 365 VGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 365 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
.|-.....+.+..+.+++++|..+-.+..+..++|...|...
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999889999999999999999999888888777777766553
No 257
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.54 E-value=0.012 Score=57.64 Aligned_cols=346 Identities=16% Similarity=0.090 Sum_probs=184.6
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccccc-CchHHHHHHHHHHHHHHH-HhcCc------------
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCLTYILSCI-TKHSP------------ 122 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-Grr~~~~~~~~~~~~~~~-~~~~~------------ 122 (417)
...+..+.++++.+...+.-..+.+.-......+.++.++|-| ||-+++.++.++..++.. .....
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 4555577788998887777777777777777788999999975 899999888777766643 22211
Q ss_pred ----------h---HHHHHHHHHHHHHHhhhhhhhHHHHHHhhh-cc-cchhhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 014832 123 ----------Q---YKILMIGRILGGIATSLLFSAFESWLVAEH-NK-RGFEQQWLSITFSKAIFLGNGLVAILSGLFGN 187 (417)
Q Consensus 123 ----------~---~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~-~~-r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~ 187 (417)
+ ...+..+.-+..+|.|+.-+.. .++-+|- ++ .+.........++..... ...|..++..+.-
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~-~~fGadQfd~~~~~~~~~~~~fFnW~yf~-~~~g~l~a~t~~v 215 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCL-LAFGADQFDELDPVEVKGIPSFFNWFYFS-QNGGALLAQTVLV 215 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcc-hhhcccccCccCcchhhCcccchhHHHHH-HHHHHHHHHHHHH
Confidence 1 1356666777778888887777 5565554 21 111111112233333333 5566666665555
Q ss_pred hhhhhccCCCchhHHHHHHHHHHHHHHHHhh-----ccccCCC----------------------C-----------C--
Q 014832 188 LLVDSFSLGPVAPFDAAACFLAIGMVIILSS-----WTENYGD----------------------P-----------S-- 227 (417)
Q Consensus 188 ~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~-----~~~~~~~----------------------~-----------~-- 227 (417)
+.-+.. +|...|.+..+...++.++.... .+...+. + .
T Consensus 216 yiq~~~--~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k~~~~~~~~~~~~~~~~~~~~~~ 293 (571)
T KOG1237|consen 216 YIQDNV--GWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFKRKAVVSLDPEELYYDCTDSVAI 293 (571)
T ss_pred hhhhcc--cceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHHHhccCCCcchhccccccccccc
Confidence 554556 99999999887766666554411 1110000 0 0
Q ss_pred CchhH---HHH------------------------HHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCC--
Q 014832 228 ESKDL---LTQ------------------------FRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPND-- 278 (417)
Q Consensus 228 ~~~~~---~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 278 (417)
+..+. .++ .-+..|.++|.-+.|...........-...... ..-.-+.+.
T Consensus 294 ~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v-~Q~~~mdr~~~ 372 (571)
T KOG1237|consen 294 EGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTTIIYSTVYAQMVTFFV-LQATTMDRHLG 372 (571)
T ss_pred cCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHHHHHHHHHHHhhhhhee-hhhhhcCCCCC
Confidence 00000 000 001223333334444443333221111111000 001111111
Q ss_pred --CCCChhHHHHHHHHHHHHHHHHHHHH----HhhcCCCc-----cchHHHHHHHHHHHHHHHHHHhhc--cCCCCCCCC
Q 014832 279 --EEIPHGFIFATFMLASMLGSSLASRL----MARSPPRV-----ESYMQIVFVVSSVSLLLPIVTSFL--VAPSNVKSG 345 (417)
Q Consensus 279 --~~~~~~~~~~~~~~~~~~~~~~~g~l----~dr~g~~~-----~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 345 (417)
+..+++.......+...+..++..+. .+|+..++ ...+-++..+..+++......... +...+....
T Consensus 373 ~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~~~~~ 452 (571)
T KOG1237|consen 373 SNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVSLLVE 452 (571)
T ss_pred CCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccchHHHHHHHHHHHHHHHHhhhhhhccCC
Confidence 22334444444344444333333332 22222211 122333444444444443332211 000000011
Q ss_pred CcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 346 GISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 346 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
....+.++.+.=.++.|++-........-..-+-+|++.|+.+.++......+|..++....
T Consensus 453 ~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv 514 (571)
T KOG1237|consen 453 TNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLV 514 (571)
T ss_pred CCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23346677788889999999888888888889999999999999999998888888877754
No 258
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.48 E-value=0.00082 Score=63.23 Aligned_cols=148 Identities=13% Similarity=0.060 Sum_probs=106.3
Q ss_pred HHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCCC--CChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHH
Q 014832 242 AIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE--IPHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIV 319 (417)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~ 319 (417)
+++.++...++.+.. ...+.......+++--++++..+ .-.|........+.++.-+..+++.+|+|+. +.+.++
T Consensus 366 ~~~~s~~~llff~~a-v~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv--~v~~lg 442 (618)
T KOG3762|consen 366 KVFASPHILLFFFVA-VVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV--NVMYLG 442 (618)
T ss_pred HHhcCCCEEehhHHH-HHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc--ceeeeh
Confidence 556666654443333 23333343444455556666322 2236555555678888889999999999988 888888
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCccccccccccccc-----
Q 014832 320 FVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRI----- 394 (417)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~----- 394 (417)
..+...=++...+.. ++|..+..-++.|+..+..+...-+++....|++.|+++.++.+.
T Consensus 443 La~~~~Rf~~~S~L~---------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~Gl 507 (618)
T KOG3762|consen 443 LACNVGRFLYYSYLQ---------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGL 507 (618)
T ss_pred hhHHHHHHHHHHHhc---------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhccc
Confidence 777777776666666 778889999999999999999999999999999999999887664
Q ss_pred chhHHHHHHHHHh
Q 014832 395 PLNIFVCVVLYNV 407 (417)
Q Consensus 395 ~~~~~~~~~~~~~ 407 (417)
+-.+|..+|...+
T Consensus 508 G~g~GslIGG~~v 520 (618)
T KOG3762|consen 508 GKGLGSLIGGFVV 520 (618)
T ss_pred Ccchhhhhhhhhh
Confidence 3455666666543
No 259
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.40 E-value=0.0026 Score=61.05 Aligned_cols=111 Identities=11% Similarity=0.052 Sum_probs=88.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHH
Q 014832 282 PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTF 361 (417)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 361 (417)
+.+...+++.++.+++.++.+.+.||++.. +.+....++..+..++-.... +.+.+++.-++.
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls--~~l~~~~~~w~~~~~~~~~~~---------------s~~~~ialr~ll 144 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRFPLS--KGLSVSGILWGLFGFLTAAVH---------------SFPGLIALRFLL 144 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhCChH--HHHHHHHHHHHHHHHHHHHHh---------------hhHHHHHHHHHH
Confidence 457788899999999999999999999744 444444444433333333333 668888999999
Q ss_pred HHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhcC
Q 014832 362 EACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCS 409 (417)
Q Consensus 362 g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~~ 409 (417)
|+..+..+|....++...+.+++|++-+|+.....++|+.+|.++-..
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g 192 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYG 192 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHH
Confidence 999999999999999999999999999999999888988888776443
No 260
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.39 E-value=0.14 Score=49.22 Aligned_cols=84 Identities=11% Similarity=0.072 Sum_probs=48.5
Q ss_pred HHHHhHHHHHhccchhHHHHHHHHHHHhHHHHHHHhhhccccCCCC-CCCh----hHHHHHHHHHHHHHHHHHHHHHhhc
Q 014832 234 TQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDE-EIPH----GFIFATFMLASMLGSSLASRLMARS 308 (417)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~g~l~dr~ 308 (417)
...+++.+.++|+|....+++.....+......-..|-...-+... +.+. |......++..++..++++.+.+|+
T Consensus 267 ~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~ 346 (491)
T PF03219_consen 267 MSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF 346 (491)
T ss_pred ccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456788888998888877776655544444333333332222111 1111 4444555666666668889999999
Q ss_pred CCCccchHHHH
Q 014832 309 PPRVESYMQIV 319 (417)
Q Consensus 309 g~~~~~~l~~~ 319 (417)
|.+ ....+.
T Consensus 347 GW~--~~Alit 355 (491)
T PF03219_consen 347 GWR--TAALIT 355 (491)
T ss_pred hHH--HHHHHh
Confidence 877 444443
No 261
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.39 E-value=0.011 Score=54.25 Aligned_cols=106 Identities=13% Similarity=0.072 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccc
Q 014832 290 FMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFW 369 (417)
Q Consensus 290 ~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 369 (417)
+++...+|.+...+..++- + |.+.+...+-.+..-+........ .+..--+.+..+....++|+..|-..
T Consensus 292 fN~~d~vG~~~a~~~~~~~--~--r~l~i~v~lR~lfiPlF~~cn~~~------~~v~~~~~~~~~~l~~~lglsnGYlt 361 (406)
T KOG1479|consen 292 FNVFDLIGSILAALLTWPD--P--RKLTIPVLLRLLFIPLFLLCNYPP------LPVVFESDGWFIFLMSLLGLSNGYLT 361 (406)
T ss_pred hHHHHHhhhhhhhcccCCC--C--ceehHHHHHHHHHHHHHHHhccCC------CCceecCchHHHHHHHHHHhccchHh
Confidence 7788888877777665552 2 344444444333222222111000 00000034667788888999999888
Q ss_pred hhHHHHHhhcCCcccccccccccccchhHHHHHHHH
Q 014832 370 PSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 370 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
+..+.+..+.+|++++-.+-.+..+....|...|..
T Consensus 362 sl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~ 397 (406)
T KOG1479|consen 362 SLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSL 397 (406)
T ss_pred hheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhH
Confidence 999999999999998888877766666665555543
No 262
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.00 E-value=0.002 Score=60.83 Aligned_cols=111 Identities=12% Similarity=0.075 Sum_probs=83.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHH
Q 014832 283 HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (417)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (417)
.|++.+...++.+++.++.|+...|.+.- ++.++.+..++.++.++........++ ..++.+++-++.|
T Consensus 73 fG~viaa~slg~~i~~liF~~Ws~k~~~~-k~Pli~s~ii~~~g~llY~~l~~~~~~----------~~y~mL~~R~l~G 141 (488)
T KOG2325|consen 73 FGLVIAASSLGHAIFSLIFGIWSNKTGSV-KKPLIVSFLIAIIGNLLYLALAYVPNG----------VKYLMLVARILTG 141 (488)
T ss_pred hhHHHHHHHHHHHhcchhhcccccccCCc-ccCHHHHHHHHHHHHHHHHHHHhcccc----------hHHHHHHHHHHcC
Confidence 38888888999999999999999998752 478889998888888777444432211 4567788888888
Q ss_pred HhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHH
Q 014832 363 ACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
++.+. ....-+++++..-.++|.++++....+.-++..+|+.
T Consensus 142 vg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 142 VGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred cCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence 88776 5666788888777777888888777666666666554
No 263
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.98 E-value=0.31 Score=46.22 Aligned_cols=50 Identities=12% Similarity=0.098 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHH
Q 014832 353 LQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCV 402 (417)
Q Consensus 353 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~ 402 (417)
.++...++..+.....+....+.-+++.+|..-|+.|.+.|...|+|+.-
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtW 456 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTW 456 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCc
Confidence 33444556666667777888999999999999999999999999998643
No 264
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.78 E-value=0.098 Score=46.52 Aligned_cols=70 Identities=17% Similarity=0.182 Sum_probs=51.4
Q ss_pred HHHhhhhccccccccccCchHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhh
Q 014832 83 GSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCITKHSPQYKILMIGRILGGIATSLLFSAFESWLVAEH 153 (417)
Q Consensus 83 ~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~~ 153 (417)
+.-...+.+.+.+..++|-|+++.++...+......=+-+.+..++-.-...|++.+..+..- .+++++.
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~Sk-gtYlT~~ 138 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASK-GTYLTPM 138 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccC-cceecHH
Confidence 333444445557889999999999988777664334455678889999999999999887765 5566554
No 265
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.66 E-value=0.06 Score=51.41 Aligned_cols=98 Identities=16% Similarity=0.183 Sum_probs=77.5
Q ss_pred HHHHhcCCCcchHHHHHHHHHHHHhhhhcccc-ccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhh
Q 014832 62 YLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVG-SLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATS 139 (417)
Q Consensus 62 ~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G-~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~ 139 (417)
.+...+++++.+.+...+.......+++.+.. .+...+|-|+++..|+..-.+... .+++++.|+......+.++...
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~ 346 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGI 346 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcc
Confidence 34467899999999888888877777777777 788889999999999999999999 9999999999999888877644
Q ss_pred hhhhhHHHHHHhhh---cccchhhh
Q 014832 140 LLFSAFESWLVAEH---NKRGFEQQ 161 (417)
Q Consensus 140 ~~~~~~~~~~i~~~---~~r~~~~~ 161 (417)
. .|.. .+.++.. +++|+...
T Consensus 347 ~-~pa~-~s~~s~~v~~~e~g~v~~ 369 (463)
T KOG2816|consen 347 V-FPAI-RAFASILVSPEEQGKVFG 369 (463)
T ss_pred h-hHHH-HhHHHhhcccccccchhh
Confidence 3 4655 4566655 55665333
No 266
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.63 E-value=0.013 Score=50.76 Aligned_cols=124 Identities=15% Similarity=0.066 Sum_probs=75.1
Q ss_pred HHhhhccccCCCCCCChhHHH---HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 014832 267 VFLWTPALSPNDEEIPHGFIF---ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVK 343 (417)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (417)
...|.|..-+ ..+.+..... ....++..+ .++.|.+.||.|.+ ..+.++.....++...........-
T Consensus 21 Fs~yS~~Lk~-~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~--~~l~iG~~~~~~GY~~~~l~~~~~i----- 91 (250)
T PF06813_consen 21 FSAYSPQLKS-RLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPW--VVLLIGAVLGFVGYGLLWLAVSGRI----- 91 (250)
T ss_pred hhhhhHHHHH-HhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchH--HHHHHHHHHHHHHHHHHHHHHhCcc-----
Confidence 3335555543 4555554433 344556655 48889999999877 7777787777777766555432110
Q ss_pred CCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHH
Q 014832 344 SGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVV 403 (417)
Q Consensus 344 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~ 403 (417)
...+.|...+...+.+.+.............+.+|+ +||++.|+......+++.+-
T Consensus 92 ---~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~ 147 (250)
T PF06813_consen 92 ---PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIF 147 (250)
T ss_pred ---CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHH
Confidence 011345555445555555444445555666688985 69999998877666655443
No 267
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.55 E-value=0.09 Score=41.98 Aligned_cols=100 Identities=9% Similarity=0.052 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014832 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (417)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (417)
++......+..++.+.+.+++|.| +.+.++.....+-... .+.+ +.+..+...++.|++.+.
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K--~sm~lg~~~y~~y~~~-~~~~---------------~~~~l~~~s~l~G~~~a~ 105 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPK--WSMILGSLGYAIYIAS-FFYP---------------NSYTLYPASALLGFGAAL 105 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhH--HHHHHHHHHHHHHHHH-HHhh---------------hHHHHHHHHHHHhhhhHH
Confidence 344455667777888899999887 7777776665543333 2333 457778889999999999
Q ss_pred cchhHHHHHhhcCCcccccccccccccchhHHHHHHHH
Q 014832 368 FWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
.+...-.++.+..+++.+++..++.....+.+..+|-.
T Consensus 106 lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~ 143 (156)
T PF05978_consen 106 LWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNL 143 (156)
T ss_pred hhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988877777765555533
No 268
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=96.47 E-value=0.83 Score=43.29 Aligned_cols=86 Identities=13% Similarity=0.049 Sum_probs=58.4
Q ss_pred CCcchhHHHHHHHHHHHHhhhhhhhHHHHHHhcCCC---cchHHHHHHHHHH-HHhhhhccccccccccCchHHHHHHHH
Q 014832 35 FNSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTYGFG---KGEIGQLFIAGFG-SSMLFGTIVGSLADKQGRKRACVTYCL 110 (417)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~s---~~~~g~~~s~~~~-~~~~~~~~~G~l~Dr~Grr~~~~~~~~ 110 (417)
.++..+.-++...+..++..+...++-.+.+.+.++ +..+.++-+...+ +..+..++.+++.+++.|.+++-....
T Consensus 21 i~r~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~ 100 (509)
T COG3202 21 IRRYELKKFLPLALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILG 100 (509)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 344455555555666666666666666777776554 4555666666666 667778889999999999999877766
Q ss_pred HHHHHHH-Hhc
Q 014832 111 TYILSCI-TKH 120 (417)
Q Consensus 111 ~~~~~~~-~~~ 120 (417)
.+....+ +++
T Consensus 101 ~F~~fF~LFa~ 111 (509)
T COG3202 101 FFLGFFALFAF 111 (509)
T ss_pred HHHHHHHHHHH
Confidence 6655554 444
No 269
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.43 E-value=0.0019 Score=59.70 Aligned_cols=142 Identities=13% Similarity=0.052 Sum_probs=89.8
Q ss_pred HHHHHHhhhccccCC-CCCC-ChhHHHHHHHHHHHHHHHHHHHHHhh----cCCCccchHHHH-HHHHHHHHHHHHHHhh
Q 014832 263 MYTFVFLWTPALSPN-DEEI-PHGFIFATFMLASMLGSSLASRLMAR----SPPRVESYMQIV-FVVSSVSLLLPIVTSF 335 (417)
Q Consensus 263 ~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~l~~~-~~~~~~~~~~~~~~~~ 335 (417)
.+..-..|.|.|+++ +.+. -.+.+....-+.+++.+++.|..+|| +||| |..+.. .....+.+.+..+...
T Consensus 47 ~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRR--RPfI~~~s~~i~~~l~Lig~aaD 124 (498)
T KOG0637|consen 47 GWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRR--RPFILAGSLLIAVSLFLIGYAAD 124 (498)
T ss_pred HHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccc--cchHHHhhHHHHHHHhhhhhHhh
Confidence 344555678888887 3322 23555555556788889999999996 5776 555444 4444444544444332
Q ss_pred ccCC--CCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccc-cccccccchhHHHHHHHHH
Q 014832 336 LVAP--SNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARST-IMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 336 ~~~~--~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~-~~g~~~~~~~~~~~~~~~~ 406 (417)
.... +|...+.........++.+.+.-+.........-++..|+..++++.+ +++.+.....+|+.+|...
T Consensus 125 ig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~ 198 (498)
T KOG0637|consen 125 IGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYAL 198 (498)
T ss_pred hhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeec
Confidence 1110 011111223344566677777777777778888899999988887777 9888888778877776554
No 270
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.42 E-value=0.014 Score=40.37 Aligned_cols=54 Identities=15% Similarity=0.114 Sum_probs=40.6
Q ss_pred HHHhhhccccCC-CCCC-ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHH
Q 014832 266 FVFLWTPALSPN-DEEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFV 321 (417)
Q Consensus 266 ~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~ 321 (417)
...-|.|.|+++ +.+. +.|.+.++..+..+++.++.|.++||.+++ +.......
T Consensus 18 ~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~--~~~l~~~~ 73 (77)
T PF12832_consen 18 CLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR--KVILLGSL 73 (77)
T ss_pred HHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc--HHHHHHHH
Confidence 444478888886 4433 457777888889999999999999999888 65555443
No 271
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.16 E-value=0.059 Score=46.37 Aligned_cols=64 Identities=8% Similarity=0.002 Sum_probs=36.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhcccc--CCCC--CCchhHHHHHHhHHHHHhccchhHHHHHHHHHH
Q 014832 196 GPVAPFDAAACFLAIGMVIILSSWTEN--YGDP--SESKDLLTQFRGAAVAIASDEKIALLGAIQSLF 259 (417)
Q Consensus 196 gw~~~f~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (417)
+|++.+.+.+++.++-+++....-.|- ..++ +++++...+.++...+.+|++..|...+.+...
T Consensus 39 ~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~w 106 (267)
T PF07672_consen 39 NWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENSTLSKKPSYKSILKEKETWKWILIYGIW 106 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccCcccccccccccccccchHHHHHccchHHHHHHHHHHH
Confidence 799999888877666555544221110 1111 111111222346788899999888777766543
No 272
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.14 E-value=0.021 Score=52.97 Aligned_cols=89 Identities=17% Similarity=0.038 Sum_probs=58.9
Q ss_pred HHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCc-hHHHHHHHHHHHHHHH----HhcC-chHHHHHHHHHHHHHH
Q 014832 64 YSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRACVTYCLTYILSCI----TKHS-PQYKILMIGRILGGIA 137 (417)
Q Consensus 64 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Gr-r~~~~~~~~~~~~~~~----~~~~-~~~~~l~~~r~l~G~~ 137 (417)
.+.-|.+....|.+.....++..+++...|.++||... |+++.+......++.+ +..- .+.+.+...-.+.|.+
T Consensus 293 l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~ 372 (480)
T KOG2563|consen 293 LCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFF 372 (480)
T ss_pred cccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHh
Confidence 34557777788999999999999999999999999864 5555555555444422 2222 2335556666777777
Q ss_pred hhhhhhhHHHHHHhhh
Q 014832 138 TSLLFSAFESWLVAEH 153 (417)
Q Consensus 138 ~~~~~~~~~~~~i~~~ 153 (417)
.....|.. .-+-.|.
T Consensus 373 ~~~~~Pig-~ElgvE~ 387 (480)
T KOG2563|consen 373 GTGYLPIG-FELGVET 387 (480)
T ss_pred hcCCCCcc-eeeeeee
Confidence 77766755 3344454
No 273
>PRK03612 spermidine synthase; Provisional
Probab=95.86 E-value=0.78 Score=44.82 Aligned_cols=42 Identities=5% Similarity=-0.244 Sum_probs=33.0
Q ss_pred hhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhccccccccc
Q 014832 57 GPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADK 98 (417)
Q Consensus 57 ~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr 98 (417)
....-.+..-+|.+..+.+.+.+++..+..+|+...|++.++
T Consensus 35 v~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 35 LLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 333334445678888999999999999999999999888744
No 274
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.56 E-value=0.26 Score=44.73 Aligned_cols=90 Identities=16% Similarity=0.165 Sum_probs=61.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHH
Q 014832 283 HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (417)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (417)
.+.++......+++...+.|.+.||+||| +.-+..+++..++++.- ..+ +.+.++++=++.|
T Consensus 71 Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk--~~cl~~cily~~scl~k-~~~---------------~~~~L~~GRvlgG 132 (354)
T PF05631_consen 71 IAILFVAGFASSAIFGTFVGSLADRYGRK--KACLLFCILYSLSCLTK-HSS---------------NYPVLLLGRVLGG 132 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCch--HHHHHHHHHHHHHHHHH-hcc---------------ccHHHHHHHHHHH
Confidence 45555555667888889999999999999 77666666666666432 112 5577888888999
Q ss_pred HhhhccchhHHHHH-hhc----CCccccccccc
Q 014832 363 ACVGIFWPSIMKMR-SQY----IPEEARSTIMN 390 (417)
Q Consensus 363 ~~~~~~~~~~~~~~-~~~----~p~~~r~~~~g 390 (417)
+...+.++..-++. .|. +|++..+...+
T Consensus 133 iaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~ 165 (354)
T PF05631_consen 133 IATSLLFSAFESWMVHEHNKRGFPQEWLSDTFS 165 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 98888777665543 333 44444444444
No 275
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.43 E-value=0.14 Score=48.87 Aligned_cols=149 Identities=15% Similarity=0.114 Sum_probs=83.1
Q ss_pred CCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH--HhcCc---------hHHHHHHHHHHHHHH
Q 014832 69 FGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI--TKHSP---------QYKILMIGRILGGIA 137 (417)
Q Consensus 69 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~--~~~~~---------~~~~l~~~r~l~G~~ 137 (417)
.|+...|.+..+..++..++.....+.--++.-|+++..+.++.++..+ ..+.. +.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 8888888888888888888888888877788889998888877776655 33332 112223333455554
Q ss_pred hhhhhhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcc---CCC---chhHHHHHHHHHHH
Q 014832 138 TSLLFSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFS---LGP---VAPFDAAACFLAIG 211 (417)
Q Consensus 138 ~~~~~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~---~gw---~~~f~~~~~~~~~~ 211 (417)
....+-.. ..+++|.-++|.... .+++...+ .++|..++..++..+.+.+. ..+ .+..++..+..++.
T Consensus 332 ~~i~~mP~-lvl~a~lcP~G~Egt----~yall~s~-~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~ 405 (433)
T PF03092_consen 332 GMIAFMPS-LVLAARLCPKGSEGT----VYALLASF-SNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLP 405 (433)
T ss_pred HHHHHHHH-HHHHHHHCCCCchHH----HHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHH
Confidence 44444443 456788855554333 33333333 44444444445444444330 011 22333444444444
Q ss_pred HHHHHhhccccCC
Q 014832 212 MVIILSSWTENYG 224 (417)
Q Consensus 212 ~~~~~~~~~~~~~ 224 (417)
+.+.. .+|++++
T Consensus 406 l~ll~-lLp~~~~ 417 (433)
T PF03092_consen 406 LPLLF-LLPPQKR 417 (433)
T ss_pred HHHHH-HcCCCch
Confidence 44433 5565443
No 276
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=95.12 E-value=0.68 Score=41.04 Aligned_cols=300 Identities=13% Similarity=0.032 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHhh
Q 014832 74 IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVAE 152 (417)
Q Consensus 74 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~~ 152 (417)
.|.+.-.-.+...+..+....+.||+---+-..+..++.+.+.+ .+++++.++-+.+-.+..++.|.....- -.+-+.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTF-L~lss~ 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITF-LALSSR 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeeh-hhhhcc
Confidence 35555566667777777777788887543334445667777788 9999999999999899888888765544 334333
Q ss_pred hcccchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCCchhHHHHHHHHHHHHHHHHhhc--cccCCCC---C
Q 014832 153 HNKRGFEQQWLSITFSKAIFLGNGLVAILSGLFGNLLVDSFSLGPVAPFDAAACFLAIGMVIILSSW--TENYGDP---S 227 (417)
Q Consensus 153 ~~~r~~~~~~~~~~~~~~~~~g~~~g~~l~~~~~~~~~~~~~~gw~~~f~~~~~~~~~~~~~~~~~~--~~~~~~~---~ 227 (417)
+ +|.....+ . .|.+..+++|..--..+.+....+-|...++...+-++.+...++.+ ||+...+ +
T Consensus 143 Y-~~~~i~~W-S--------SGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~ 212 (409)
T KOG3880|consen 143 Y-PSIVIAGW-S--------SGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQP 212 (409)
T ss_pred C-CCceeccc-c--------CCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCc
Confidence 3 11111111 1 11222223332221222221212567776666555443333333233 3322100 0
Q ss_pred ------------CchhHH--HHHHhHHHHHhcc-chhHHHHHHHHHHHhHHHHHHHhhhccccC---CCCCC----ChhH
Q 014832 228 ------------ESKDLL--TQFRGAAVAIASD-EKIALLGAIQSLFEGSMYTFVFLWTPALSP---NDEEI----PHGF 285 (417)
Q Consensus 228 ------------~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~ 285 (417)
+..+++ .+.+...++-++. ++.+...+-.......-|..-.-..+...- ++... +.-+
T Consensus 213 ~~~~~~~~~~~~~a~e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRw 292 (409)
T KOG3880|consen 213 STEIIPSQYLPFEAAEEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRW 292 (409)
T ss_pred cceeccCCCCcccccccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchh
Confidence 000101 1111222222222 333333333333333333322223333322 22222 2233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHH------HHHHHHhhccCCCCCCCCCcccchhHHHHHHH
Q 014832 286 IFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSL------LLPIVTSFLVAPSNVKSGGISFSGSLQLLGFC 359 (417)
Q Consensus 286 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (417)
....+.++..+.+-- -|+-+- +.+....++..+-+ ....+.+ +.+..++..+
T Consensus 293 yqvlYQlGVFiSRSS-----~~~~~~--p~l~~LailQ~vNl~ff~~~a~~~ftp---------------si~ivf~lI~ 350 (409)
T KOG3880|consen 293 YQVLYQLGVFISRSS-----INLFTM--PYLWLLAILQFVNLLFFLLQAWYWFTP---------------SIWIVFALIL 350 (409)
T ss_pred hheeeeeeEEEEecc-----ceEEec--hHHHHHHHHHHHHHHHHHHHHHHHhcc---------------HHHHHHHHHH
Confidence 444444544433311 111111 11211112211111 1112222 5566666666
Q ss_pred HHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 360 TFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 360 l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
.-|+.-|..+...+--+.+..++++|--+++...++-.+|..+....
T Consensus 351 ~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~l 397 (409)
T KOG3880|consen 351 FEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLL 397 (409)
T ss_pred HHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHH
Confidence 66777777777788888888899999999999888877777666543
No 277
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.67 E-value=0.14 Score=45.55 Aligned_cols=106 Identities=20% Similarity=0.218 Sum_probs=70.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHH
Q 014832 283 HGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFE 362 (417)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 362 (417)
.+.......+...++.+..|++.||.||| +.+..+................ . ..+.........+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~~~~~~~g 105 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRR--KVLIIGLLLFLLGTLLLALAPN--V-----------GLALLLILRLLQG 105 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccch--HHHHHHHHHHHHHHHHHHhCcc--c-----------hHHHHHHHHHHHH
Confidence 46666777788888889999999999877 5555555432332222222220 0 2345555555578
Q ss_pred HhhhccchhHHHHHhhcCCc-cccccccccccc-chhHHHHHH
Q 014832 363 ACVGIFWPSIMKMRSQYIPE-EARSTIMNFFRI-PLNIFVCVV 403 (417)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~p~-~~r~~~~g~~~~-~~~~~~~~~ 403 (417)
++.+...+...++..|..|+ +.|+...+.... ...++..++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (338)
T COG0477 106 LGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALG 148 (338)
T ss_pred hhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889999999999998 667877776665 344444444
No 278
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.19 E-value=0.64 Score=42.56 Aligned_cols=164 Identities=12% Similarity=-0.007 Sum_probs=83.5
Q ss_pred ccchhHHHHHHHHHHHhHHHHHHHhhhccccCC-CCCCChhHHHHHHHHHHHHHHHHHHHHHh-----hcCCCccchHHH
Q 014832 245 SDEKIALLGAIQSLFEGSMYTFVFLWTPALSPN-DEEIPHGFIFATFMLASMLGSSLASRLMA-----RSPPRVESYMQI 318 (417)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~g~~~~~~l~~ 318 (417)
++++-+.+.+..-+.|+.-+.... -.|.+++. +.+...-..++ +.---.--.+++..+.| |+|||.....-.
T Consensus 28 ~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS-~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp~ 105 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFS-FAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVPC 105 (510)
T ss_pred hhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhh-hhhhHHHHHHHHHhhhHHHHHHhhccccceeeeh
Confidence 344444455555566777665555 48888885 33332211111 11111222345555666 999983322222
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCccc-chhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchh
Q 014832 319 VFVVSSVSLLLPIVTSFLVAPSNVKSGGISF-SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLN 397 (417)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 397 (417)
-.. ....+.++........ .++... +.......+++.-+.....-.....+......+++-|-+.....++++
T Consensus 106 q~l-lG~~mllLs~~v~~~~-----g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~ 179 (510)
T KOG3574|consen 106 QYL-LGLFMLLLSYLVDRGL-----GGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQT 179 (510)
T ss_pred HHH-HHHHHHHHhhCCCccc-----ccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHh
Confidence 222 2222222222211000 111111 112222234455555555456778888888888888888888888888
Q ss_pred HHHHHHHHHhcCCcccccC
Q 014832 398 IFVCVVLYNVCSSMTFKYC 416 (417)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~ 416 (417)
.|.+++--.+-.-+..-+|
T Consensus 180 ~GyfL~~~ifLaL~s~dF~ 198 (510)
T KOG3574|consen 180 AGYFLGNVVFLALESPDFC 198 (510)
T ss_pred hhHHhhcceeeEecChhhh
Confidence 8888776655544443333
No 279
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=91.74 E-value=0.53 Score=47.26 Aligned_cols=113 Identities=18% Similarity=0.205 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-cCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHh
Q 014832 286 IFATFMLASMLGSSLASRLMAR-SPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEAC 364 (417)
Q Consensus 286 ~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 364 (417)
++..+....-+..+++|+++|+ +|++ +.+.++.++..++..++........ .........++++.+...|
T Consensus 28 i~~~f~~l~yl~pilGg~iAD~~lG~~--~tIl~~~ii~~lG~~llai~a~~~~-------~~~~~~~~~l~gLaLia~G 98 (654)
T TIGR00926 28 LFHTFTYLCYLTPLIGAIIADGWLGKF--KTILYLSIVYVVGHALLSFGAIPSS-------GHPLHDLLDLLGLALIALG 98 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHHHHHHHHHHHhccCccc-------ccchHHHHHHHHHHHHHhh
Confidence 3344444556777888999997 4666 7777777777766655554321000 0001223456778888889
Q ss_pred hhccchhHHHHHhhcCCccc---ccccccccccchhHHHHHHHHHh
Q 014832 365 VGIFWPSIMKMRSQYIPEEA---RSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 365 ~~~~~~~~~~~~~~~~p~~~---r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
.|..-|...+...|.+++++ |-+.+.++..+.|+|+.++....
T Consensus 99 ~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~ 144 (654)
T TIGR00926 99 TGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIIT 144 (654)
T ss_pred ccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988999999999998653 45566666677777777765543
No 280
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=90.40 E-value=0.059 Score=52.75 Aligned_cols=122 Identities=12% Similarity=0.104 Sum_probs=2.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCC-----------------CC--
Q 014832 282 PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPS-----------------NV-- 342 (417)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~-- 342 (417)
+.|.+.+.+-++.++..++..+..+|.+|. |.+-.+..+.+++.++..+.+....++ .+
T Consensus 39 ~~G~i~s~~di~~~~~~~~vsy~g~~~hrp--rwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~ 116 (539)
T PF03137_consen 39 QSGLISSSYDIGSLVVVLFVSYFGGRGHRP--RWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDS 116 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCc--ceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccc
Confidence 457888888899999999999999886544 566666666666666554433221111 00
Q ss_pred ----------------CCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHH
Q 014832 343 ----------------KSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 343 ----------------~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
+....+.....++++.++.|++....++.-.+++-|.++++..+...|+......+|-.+|..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~ 195 (539)
T PF03137_consen 117 SSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFL 195 (539)
T ss_dssp -----------------------------------SSS-----------------------------------------
T ss_pred cccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHH
Confidence 011112234677788899999999999999999999999999999999888877776666544
No 281
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=89.37 E-value=6.9 Score=37.68 Aligned_cols=112 Identities=8% Similarity=-0.034 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCC---CC------CCCCccc-------chhHHHHH
Q 014832 294 SMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPS---NV------KSGGISF-------SGSLQLLG 357 (417)
Q Consensus 294 ~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~~-------~~~~~~~~ 357 (417)
.++..++.+++++|++|+ +............+.+..+......+. +. ...+.+. +.|...+.
T Consensus 57 ~~~~~~ly~~l~~~~~~~--~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~F 134 (472)
T TIGR00769 57 AVIFMLIYTKLSNILSKE--ALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALF 134 (472)
T ss_pred HHHHHHHHHHHHhcCCHH--HhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHH
Confidence 334478899999999887 666555544444443333331111100 00 0000000 12223333
Q ss_pred HHHHHHhhhccch-hHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 358 FCTFEACVGIFWP-SIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 358 ~~l~g~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
.+..........+ ..++.++|....++-.+-+++..+..|++..++....
T Consensus 135 Yv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~ 185 (472)
T TIGR00769 135 YVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI 185 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444445 7899999999999999999999999999988887653
No 282
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=89.09 E-value=1.9 Score=30.24 Aligned_cols=63 Identities=22% Similarity=0.355 Sum_probs=45.3
Q ss_pred hhccccCC-CCCC-ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHh
Q 014832 270 WTPALSPN-DEEI-PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTS 334 (417)
Q Consensus 270 ~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~ 334 (417)
.+|...++ +.+. +.+.+.+...++..+|.+...++.++.+++ +.+..+.....+......+..
T Consensus 14 lLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~--~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 14 LLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR--RLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH--HHHHHHHHHHHHHHHHHHHHh
Confidence 57777776 3443 347777888899999999999998885444 667777777777666666655
No 283
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=88.79 E-value=20 Score=33.22 Aligned_cols=76 Identities=24% Similarity=0.188 Sum_probs=42.5
Q ss_pred CcchhHHHHHHHHHHHHhhhhhhhHHHHHHhc-CCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHH
Q 014832 36 NSFKNNYLLVYSLMMAGDWLQGPYVYYLYSTY-GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLT 111 (417)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~ 111 (417)
++....+....++....+-+-.......+.++ |-|-...+.-..+-.....+..++.|...|+..|+|++...+.+
T Consensus 26 s~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~l 102 (503)
T KOG2601|consen 26 SSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLL 102 (503)
T ss_pred cceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhh
Confidence 33344444444555555543333332233344 32333333333334455667777889999999999999877554
No 284
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=87.08 E-value=15 Score=35.01 Aligned_cols=108 Identities=19% Similarity=0.086 Sum_probs=65.7
Q ss_pred HhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHH------HH-HhcCc----hHHHHHHHHHH
Q 014832 65 STYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILS------CI-TKHSP----QYKILMIGRIL 133 (417)
Q Consensus 65 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~------~~-~~~~~----~~~~l~~~r~l 133 (417)
+..|+++..+|..-+...+....+.....++.+|+|..|.-.++...-..+ .+ ..-.+ +...++.+-++
T Consensus 286 ~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~ 365 (432)
T PF06963_consen 286 KSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIAL 365 (432)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHH
Confidence 444999999999999999999999999999999999988877775533222 22 11112 22333333333
Q ss_pred HHHHhhhhhhhHHHHHHhhh---cccchhhhHHHHHHHHHHHH
Q 014832 134 GGIATSLLFSAFESWLVAEH---NKRGFEQQWLSITFSKAIFL 173 (417)
Q Consensus 134 ~G~~~~~~~~~~~~~~i~~~---~~r~~~~~~~~~~~~~~~~~ 173 (417)
.=+|.=...-+. .-++.|. ++||...+...+..+.....
T Consensus 366 SR~GLW~fDL~~-~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 366 SRIGLWSFDLAV-TQIMQENVPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred HHHHHHhhhHHH-HHhhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence 334422222222 3345554 66776666655555444444
No 285
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=85.93 E-value=15 Score=34.50 Aligned_cols=78 Identities=8% Similarity=0.051 Sum_probs=46.5
Q ss_pred cchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHH--HHHH---HHH-HhcCchHHHHHHHHHHHHHHhhhhhhh
Q 014832 71 KGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCL--TYIL---SCI-TKHSPQYKILMIGRILGGIATSLLFSA 144 (417)
Q Consensus 71 ~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~--~~~~---~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~ 144 (417)
..+..+....+.+|-.++.--.-.+ |+ |++.+.+.+ +..+ ... .-+.++.|..++.-+..|+..|..+..
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVN 355 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVN 355 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 3555666667777766664432221 34 334333322 2111 122 444678999999999999999999888
Q ss_pred HHHHHHhhh
Q 014832 145 FESWLVAEH 153 (417)
Q Consensus 145 ~~~~~i~~~ 153 (417)
. ...+.|.
T Consensus 356 t-F~~I~~~ 363 (402)
T PF02487_consen 356 T-FYRISEE 363 (402)
T ss_pred H-HHHHHhc
Confidence 7 4455554
No 286
>COG2119 Predicted membrane protein [Function unknown]
Probab=84.97 E-value=16 Score=29.70 Aligned_cols=54 Identities=15% Similarity=0.015 Sum_probs=33.2
Q ss_pred HHHHhcCCCc-chHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHH
Q 014832 62 YLYSTYGFGK-GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (417)
Q Consensus 62 ~l~~~~g~s~-~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~ 116 (417)
.+..+.+... -.+|. .....+...++...+.+++||+..|++-.++.+++.+..
T Consensus 124 aLaA~~~~~~~V~~Gt-~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 124 ALAADYHSPWAVFAGT-TLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHhhcCCCceeeehhh-HHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 4455665422 22222 112335666667778889999999998888766655543
No 287
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=84.76 E-value=0.35 Score=43.85 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhh
Q 014832 286 IFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACV 365 (417)
Q Consensus 286 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 365 (417)
.+..++++..+|+.+.++..-+. ++ ++.+......-.+..-++..... .+.+-..+..-.+-+..++.++++++..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~-~~-~~~l~~~s~~R~~fiPlf~~cn~--~p~~~~~~~~~~~d~~~~i~~~l~g~TN 262 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPG-PS-PRWLWILSLLRFLFIPLFLLCNV--QPRPRYLPVLFNSDAWFIILMLLFGFTN 262 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecc-cc-cccHHHHHHHHHHHHHHHHHHHh--hcccccCCCcccchHHHHHHHHHHHHcc
Confidence 45678899999999888743221 11 13443333332222111111110 0000000000113356677788999999
Q ss_pred hccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHH
Q 014832 366 GIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYN 406 (417)
Q Consensus 366 ~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 406 (417)
|-..+..+.+..+.+++++|..+-.+..+..+.|...|...
T Consensus 263 Gyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 263 GYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ----HHHH---------------------------------
T ss_pred chhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99889999999999999999999888888888877777653
No 288
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.04 E-value=2.6 Score=40.18 Aligned_cols=98 Identities=8% Similarity=0.006 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhc
Q 014832 288 ATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGI 367 (417)
Q Consensus 288 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 367 (417)
++......+..++.+.+.|+++.| ..+.++........ +-.+.. |.+..+...++.|++.+.
T Consensus 57 aiiY~~ftv~~l~~psiv~~i~~K--~~lv~ga~~y~~f~-~gfl~~---------------N~y~~yfssallG~Gaal 118 (461)
T KOG3098|consen 57 AIIYAFFTVSCLFAPSIVNFLGPK--WALVIGATCYAAFP-LGFLFP---------------NSYYLYFSSALLGFGAAL 118 (461)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhHH--HHHHHHhHHHHHHH-HHHHhc---------------chHHHHHHHHHhhhhHHh
Confidence 455567778888889999999877 55555555444433 333333 557888999999999999
Q ss_pred cchhHHHHHhhcCCcccccccccccccchhHHHHHH
Q 014832 368 FWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVV 403 (417)
Q Consensus 368 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~ 403 (417)
.+...-.+..|...++.+.+..++.....+.+.++|
T Consensus 119 lw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~G 154 (461)
T KOG3098|consen 119 LWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIG 154 (461)
T ss_pred eecccceehhhcCChhhHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999888777666666555
No 289
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=82.93 E-value=27 Score=29.24 Aligned_cols=28 Identities=25% Similarity=0.376 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 014832 164 SITFSKAIFLGNGLVAILSGLFGNLLVD 191 (417)
Q Consensus 164 ~~~~~~~~~~g~~~g~~l~~~~~~~~~~ 191 (417)
...++.+-..++.+-+.+...++..+..
T Consensus 35 ~l~y~~GRi~sY~llG~l~g~~G~~l~~ 62 (199)
T PF13386_consen 35 HLLYNLGRILSYTLLGALAGLLGSGLSL 62 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566667666676666666666666643
No 290
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=80.14 E-value=19 Score=36.60 Aligned_cols=58 Identities=14% Similarity=0.042 Sum_probs=42.0
Q ss_pred hhhHH-HHHHhcCCCcchHHHHHHHHH-HHHhhhhccccccccccC--chHHHHHHHHHHHH
Q 014832 57 GPYVY-YLYSTYGFGKGEIGQLFIAGF-GSSMLFGTIVGSLADKQG--RKRACVTYCLTYIL 114 (417)
Q Consensus 57 ~~~l~-~l~~~~g~s~~~~g~~~s~~~-~~~~~~~~~~G~l~Dr~G--rr~~~~~~~~~~~~ 114 (417)
..++| .+.++||.+.+.+..+.+... -+.++|..++|++..|+- .|....+.++...+
T Consensus 412 ~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 412 ITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred HHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 47888 666799999999998875544 667788889999999874 45555444444433
No 291
>PRK03612 spermidine synthase; Provisional
Probab=75.75 E-value=22 Score=34.97 Aligned_cols=51 Identities=8% Similarity=0.023 Sum_probs=30.5
Q ss_pred HHHHHHHHHhhhccchhHHHHHhhcCC---cccccccccccccchhHHHHHHHH
Q 014832 355 LLGFCTFEACVGIFWPSIMKMRSQYIP---EEARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 355 ~~~~~l~g~~~~~~~~~~~~~~~~~~p---~~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
....++.++..|+..|....+..+... .+.-|+.++...++.-+|..+..+
T Consensus 114 ~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 114 YVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPF 167 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHH
Confidence 344456678888888887777666433 234456666655555555544433
No 292
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=73.49 E-value=56 Score=30.85 Aligned_cols=95 Identities=15% Similarity=0.021 Sum_probs=64.6
Q ss_pred hhHHHHHHhc---CCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHH--HHHHHHHHH-HhcCchHHHHHHHH
Q 014832 58 PYVYYLYSTY---GFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTY--CLTYILSCI-TKHSPQYKILMIGR 131 (417)
Q Consensus 58 ~~l~~l~~~~---g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~--~~~~~~~~~-~~~~~~~~~l~~~r 131 (417)
.+...+.++. +-+..--|.+-.+..+..+++.+..|++-.++.+..-+.++ .++.+...+ ++..+|.|...++.
T Consensus 268 nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~y 347 (412)
T PF01770_consen 268 NYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGY 347 (412)
T ss_pred HHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4444455555 22223348888888888999999999998888775554444 334445555 88899999999999
Q ss_pred HHHHHHhhhhhhhHHHHHHhhh
Q 014832 132 ILGGIATSLLFSAFESWLVAEH 153 (417)
Q Consensus 132 ~l~G~~~~~~~~~~~~~~i~~~ 153 (417)
++.+.......+.+ ..-++..
T Consensus 348 Iif~~~y~fliTiA-~~qIA~~ 368 (412)
T PF01770_consen 348 IIFRSLYMFLITIA-SFQIAKN 368 (412)
T ss_pred HHHHHHHHHHHHHH-HHHHHHh
Confidence 98887777666665 3334443
No 293
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=71.71 E-value=73 Score=31.02 Aligned_cols=113 Identities=13% Similarity=0.013 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHH--hhcc--CCC---CC--CCCCccc-------chhHHHH
Q 014832 293 ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVT--SFLV--APS---NV--KSGGISF-------SGSLQLL 356 (417)
Q Consensus 293 ~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~--~~~~--~~~---~~--~~~~~~~-------~~~~~~~ 356 (417)
+.++...+..++++|++++ +..............+..+. +..+ +++ +. .....+. +.|...+
T Consensus 71 ~a~~f~~~y~kl~n~~s~~--~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~sl 148 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSRE--KLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSL 148 (491)
T ss_pred HHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 4566677789999999877 65554444333333332222 2111 110 00 0000000 1112222
Q ss_pred HHHHHHHhhhccch-hHHHHHhhcCCcccccccccccccchhHHHHHHHHHh
Q 014832 357 GFCTFEACVGIFWP-SIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNV 407 (417)
Q Consensus 357 ~~~l~g~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 407 (417)
..+....-.....+ ..+..++|..+.++..+-+++..+..|++..++....
T Consensus 149 fYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~ 200 (491)
T PF03219_consen 149 FYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLT 200 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222223334 5689999999999999999999999999888877653
No 294
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=70.27 E-value=78 Score=31.17 Aligned_cols=26 Identities=15% Similarity=0.275 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014832 286 IFATFMLASMLGSSLASRLMARSPPR 311 (417)
Q Consensus 286 ~~~~~~~~~~~~~~~~g~l~dr~g~~ 311 (417)
....+.+.+.+++..++++-..++.+
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCCC
Confidence 33455667777777777777777654
No 295
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=69.84 E-value=14 Score=34.30 Aligned_cols=87 Identities=15% Similarity=0.131 Sum_probs=57.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccchhHHHHHHHHHHHhhhccchhHHHHHhhcCCccc---cccccc
Q 014832 314 SYMQIVFVVSSVSLLLPIVTSFLVAPSNVKSGGISFSGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEEA---RSTIMN 390 (417)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~---r~~~~g 390 (417)
|.+.++..+..++.+++........ .+...+...+.+++.+.++|.|..=|...++..|.++++. |.+...
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~------~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~ 75 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPS------LPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFN 75 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSS------C------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcch------hhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHH
Confidence 3556666777776666444432111 0111134678888999999999999999999999998773 455667
Q ss_pred ccccchhHHHHHHHHH
Q 014832 391 FFRIPLNIFVCVVLYN 406 (417)
Q Consensus 391 ~~~~~~~~~~~~~~~~ 406 (417)
.+..+.|+|..++...
T Consensus 76 ~fY~~in~G~~~~~~~ 91 (372)
T PF00854_consen 76 WFYWGINIGSLFSPTL 91 (372)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHhhhhHhhccc
Confidence 7778888888887653
No 296
>PRK11469 hypothetical protein; Provisional
Probab=67.50 E-value=58 Score=26.97 Aligned_cols=27 Identities=7% Similarity=-0.017 Sum_probs=18.5
Q ss_pred cccccccccCchHHHHHHHHHHHHHHH
Q 014832 91 IVGSLADKQGRKRACVTYCLTYILSCI 117 (417)
Q Consensus 91 ~~G~l~Dr~Grr~~~~~~~~~~~~~~~ 117 (417)
.+.++.+++|+|.-++-+.++..++.-
T Consensus 154 lG~~~g~~~g~~a~~lgG~iLI~iGi~ 180 (188)
T PRK11469 154 VGRFIGSIIGKKAEILGGLVLIGIGVQ 180 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444566678888777777777776643
No 297
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=56.67 E-value=2e+02 Score=27.99 Aligned_cols=111 Identities=8% Similarity=-0.025 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHHHHhhccCCC---CC--------CCC-Cc-----ccchhHHH
Q 014832 293 ASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPIVTSFLVAPS---NV--------KSG-GI-----SFSGSLQL 355 (417)
Q Consensus 293 ~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~--------~~~-~~-----~~~~~~~~ 355 (417)
++++..++..++.+++.++ +............+++..+.-.+..+. |. +.+ +. .++.|...
T Consensus 74 ~avif~~iy~kl~~~lt~~--~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s 151 (509)
T COG3202 74 SAVIFTIIYQKLLNILTRE--KVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYS 151 (509)
T ss_pred HHHHHHHHHHHHHhhcCHH--HHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHH
Confidence 6778888889999988666 665555554444444444332211110 10 011 10 01123333
Q ss_pred HHHHHHHHhhhccch-hHHHHHhhcCCcccccccccccccchhHHHHHHHH
Q 014832 356 LGFCTFEACVGIFWP-SIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLY 405 (417)
Q Consensus 356 ~~~~l~g~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~ 405 (417)
......-.--....+ ..+..++|....++-.+-++++++..|++..++..
T Consensus 152 ~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~ 202 (509)
T COG3202 152 LFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGE 202 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 333333333233333 66889999999999999999998888887666554
No 298
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=56.32 E-value=34 Score=27.12 Aligned_cols=33 Identities=9% Similarity=-0.061 Sum_probs=25.8
Q ss_pred chhHHHHHhhcCCcccccccccccccchhHHHH
Q 014832 369 WPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVC 401 (417)
Q Consensus 369 ~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~ 401 (417)
..+.|..++-.-++++.|+..|+-.+-.|++.+
T Consensus 112 lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 112 LGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 455677778888899999999998877777654
No 299
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=53.03 E-value=40 Score=32.63 Aligned_cols=52 Identities=2% Similarity=-0.243 Sum_probs=35.0
Q ss_pred HHhhhccchhHHHHHhhcCCcccccccccccccchhHHHHHHHHHhcCCccc
Q 014832 362 EACVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVCSSMTF 413 (417)
Q Consensus 362 g~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
-+..+-.-.....++-....++.++-|..-..++.|.|.+++.-.+..-++.
T Consensus 129 ~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~ 180 (544)
T PF13000_consen 129 VFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSP 180 (544)
T ss_pred HHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCH
Confidence 3333333355677777788888888888877788888888776655444443
No 300
>PF06808 DctM: DctM-like transporters; InterPro: IPR010656 This domain represents a conserved region located towards the N terminus of the DctM subunit of the bacterial and archaeal TRAP C4-dicarboxylate transport (Dct) system permease. In general, C4-dicarboxylate transport systems allow C4-dicarboxylates like succinate, fumarate, and malate to be taken up. TRAP C4-dicarboxylate carriers are secondary carriers that use an electrochemical H+ gradient as the driving force for transport. DctM is an integral membrane protein that is one of the constituents of TRAP carriers [, ]. Note that many family members are hypothetical proteins.
Probab=49.71 E-value=1e+02 Score=29.38 Aligned_cols=33 Identities=15% Similarity=0.289 Sum_probs=20.1
Q ss_pred HHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q 014832 149 LVAEHNKRGFEQQWLSITFSKAIFLGNGLVAIL 181 (417)
Q Consensus 149 ~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l 181 (417)
.+.|.+|+|+..+........+...|..+-+.+
T Consensus 121 ~iP~M~k~GY~~~~A~av~aasgtlG~liPPsi 153 (416)
T PF06808_consen 121 TIPEMKKAGYPPEFAAAVIAASGTLGQLIPPSI 153 (416)
T ss_pred HHHHHHHcCCCHHHhHHHHhhccccchhcchHH
Confidence 466668888888776665555555544333333
No 301
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=46.14 E-value=2.8e+02 Score=26.64 Aligned_cols=103 Identities=16% Similarity=0.074 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhhhhccccccccccCch--HHHHHHHH--HHHHHHH-Hh---------cCchHHHHHHHHHHHHHHhhhh
Q 014832 76 QLFIAGFGSSMLFGTIVGSLADKQGRK--RACVTYCL--TYILSCI-TK---------HSPQYKILMIGRILGGIATSLL 141 (417)
Q Consensus 76 ~~~s~~~~~~~~~~~~~G~l~Dr~Grr--~~~~~~~~--~~~~~~~-~~---------~~~~~~~l~~~r~l~G~~~~~~ 141 (417)
.....+.++-.+|..+..+.. .-++| ++.+.+.. ++.-..+ |. .-++-+..++.-++.|+..|-.
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~ 389 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL 389 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence 455566677777777554321 11222 33333221 1111122 32 2235566677789999999887
Q ss_pred hhhHHHHHHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q 014832 142 FSAFESWLVAEHNKRGFEQQWLSITFSKAIFLGNGLVAIL 181 (417)
Q Consensus 142 ~~~~~~~~i~~~~~r~~~~~~~~~~~~~~~~~g~~~g~~l 181 (417)
...+ ..+..+..+ ....+..+..++.....|..+|..+
T Consensus 390 ~s~~-m~~~p~~v~-~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 390 GSLS-MCLAPRQVD-PHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHH-HHhcCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655 434444411 1222333334444444444444443
No 302
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=42.82 E-value=2.8e+02 Score=25.81 Aligned_cols=78 Identities=10% Similarity=-0.001 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHhhhhccccccccccCchHHH--HHHHHHHHHHHH-HhcCchHHHHHHHHHHHHHHhhhhhhhHHHHHHh
Q 014832 75 GQLFIAGFGSSMLFGTIVGSLADKQGRKRAC--VTYCLTYILSCI-TKHSPQYKILMIGRILGGIATSLLFSAFESWLVA 151 (417)
Q Consensus 75 g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~--~~~~~~~~~~~~-~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~ 151 (417)
|..-.+..+..+++.+..|.+--++.|..-+ ..+.+.-+...+ +...+++|...++.++...--....+.+ ..-++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA-~~~iA 352 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIA-TFQIA 352 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHH-HHHHH
Confidence 6667777788888899999998888776433 334444444455 8888899998888888877766666665 33344
Q ss_pred hh
Q 014832 152 EH 153 (417)
Q Consensus 152 ~~ 153 (417)
+.
T Consensus 353 ~n 354 (433)
T KOG3810|consen 353 RN 354 (433)
T ss_pred Hh
Confidence 43
No 303
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=42.33 E-value=46 Score=29.17 Aligned_cols=80 Identities=13% Similarity=0.113 Sum_probs=0.0
Q ss_pred ccccccCCcCcCCcchhHHHHHHH-HHHHHhhhhhhhHHHHHHhcCCCcchHHHHHHHHHHHHhhhhcccccccc-----
Q 014832 24 TNKDRINTSSAFNSFKNNYLLVYS-LMMAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLAD----- 97 (417)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~D----- 97 (417)
..+++++..++..+++....-+.- +--.....-..++-...++.|.++.....++-+..+.-++..++.|...|
T Consensus 3 ~~~eeDPstkPigr~svf~yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~ 82 (412)
T KOG4830|consen 3 PVREEDPSTKPIGRTSVFAYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLP 82 (412)
T ss_pred CcccCCCCCCcccceeeeeechhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccH
Q ss_pred ----ccCchH
Q 014832 98 ----KQGRKR 103 (417)
Q Consensus 98 ----r~Grr~ 103 (417)
|+|||+
T Consensus 83 ~~idr~G~~~ 92 (412)
T KOG4830|consen 83 ACIDRIGRRM 92 (412)
T ss_pred HHhhhhccee
No 304
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=40.72 E-value=1.5e+02 Score=21.88 Aligned_cols=48 Identities=15% Similarity=0.154 Sum_probs=35.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHH
Q 014832 282 PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPI 331 (417)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~ 331 (417)
+.|-+++.++-..++.+++.++..|+.. |.+.=.++..++.+...+..
T Consensus 55 ~fGRvYAAYGGvfI~~Sl~W~w~vdg~~--Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 55 AFGRVYAAYGGVFIVASLLWGWLVDGVR--PDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred cchhHHHHhhhhHHHHHHHHHhhhcCcC--CChHHHHhHHHHHHhHHheE
Confidence 4578888888888999999999999964 33666666666665554443
No 305
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=39.45 E-value=2.4e+02 Score=24.06 Aligned_cols=31 Identities=6% Similarity=0.116 Sum_probs=21.1
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHhhc
Q 014832 278 DEEIPHGFIFATFMLASMLGSSLASRLMARS 308 (417)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 308 (417)
+...+-+.....++++....-+..|..++++
T Consensus 161 gS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~ 191 (232)
T COG2836 161 GSAFEGALVMLAFGLGTLPNLLAMGIFSSKL 191 (232)
T ss_pred CCHHHHHHHHHHHhhcccHHHHHHHHHHHHH
Confidence 4444456666778888777777777777765
No 306
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=39.10 E-value=3.2e+02 Score=25.40 Aligned_cols=114 Identities=11% Similarity=0.009 Sum_probs=65.4
Q ss_pred cchhHHHHHHHHHHHHhhhhhhhHHHHHHh-cCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHH---
Q 014832 37 SFKNNYLLVYSLMMAGDWLQGPYVYYLYST-YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTY--- 112 (417)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~--- 112 (417)
++++.+....+.+.++.-..--.+-.+... +|-+--|.+.+.+.+...+.+|+...-++.|.--.-+....=.++.
T Consensus 7 ~~~alL~laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllglig 86 (508)
T COG4262 7 RWRALLLLAVFVCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIG 86 (508)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhc
Confidence 445554444444433332222222244544 3556678889999999999999998888877533322221111111
Q ss_pred --HHHHH-HhcC----chHHHHHHHHHHHHHHhhhhhhhHHHHHHh
Q 014832 113 --ILSCI-TKHS----PQYKILMIGRILGGIATSLLFSAFESWLVA 151 (417)
Q Consensus 113 --~~~~~-~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~~i~ 151 (417)
+...+ ..|+ ++-+.+.+.-.+.|.-.|...|.. ..++.
T Consensus 87 g~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~-mrml~ 131 (508)
T COG4262 87 GVSAAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPLL-MRMLQ 131 (508)
T ss_pred cchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchHHH-HHHHH
Confidence 11112 2333 356778888899999999988877 44543
No 307
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=36.60 E-value=2.8e+02 Score=23.98 Aligned_cols=46 Identities=11% Similarity=-0.096 Sum_probs=28.0
Q ss_pred CCcchHHHHHHHHHH-HHhhhhccccccccccCchHHHHHHHHHHHHHHH
Q 014832 69 FGKGEIGQLFIAGFG-SSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI 117 (417)
Q Consensus 69 ~s~~~~g~~~s~~~~-~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~ 117 (417)
.+..+...+....-+ ...++.++ +-||.++|+.+.....+.++..+
T Consensus 94 ~~~~~a~~l~~~~Pi~~~lla~~~---l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 94 GSSLEVSLGYLINPLVMVALGRVF---LKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH---HhcCCCHHHHHHHHHHHHHHHHH
Confidence 444555554444443 33333333 46999999998877776666555
No 308
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=33.21 E-value=4e+02 Score=25.23 Aligned_cols=34 Identities=9% Similarity=0.009 Sum_probs=22.6
Q ss_pred chhHHHHHHHHHHHhhhccchhHHHHHhhcCCcc
Q 014832 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQYIPEE 383 (417)
Q Consensus 350 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~ 383 (417)
......+..++.+.+.+..+...+...++.-++-
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~y 149 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEY 149 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHH
Confidence 4455666677778888877777777766544433
No 309
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=32.55 E-value=2.5e+02 Score=24.05 Aligned_cols=51 Identities=14% Similarity=0.080 Sum_probs=34.1
Q ss_pred HHHhcCCCcchHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHH
Q 014832 63 LYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (417)
Q Consensus 63 l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~ 116 (417)
+.+..+++..++|...+..+.... +..-.+.+|.+.|+....|.....++.
T Consensus 122 ~a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~~~~~p~~LG~~Mi~~Gl 172 (224)
T PF09930_consen 122 LAPSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRLKKPYPIILGNFMIFLGL 172 (224)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 356788899999887776665544 355666778886666666655554443
No 310
>PRK02237 hypothetical protein; Provisional
Probab=32.40 E-value=2.1e+02 Score=21.18 Aligned_cols=48 Identities=15% Similarity=0.141 Sum_probs=35.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHHHHHH
Q 014832 282 PHGFIFATFMLASMLGSSLASRLMARSPPRVESYMQIVFVVSSVSLLLPI 331 (417)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~~~~~~~~~~~ 331 (417)
+.|-+++.++-..++.+++.++..|+.. |.+.=.++..++.+...+..
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~--Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVR--PDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcC--CChhHHHhHHHHHHhHHHhe
Confidence 3688888888888999999999999864 33666666666665554443
No 311
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=27.69 E-value=1.1e+02 Score=19.72 Aligned_cols=22 Identities=14% Similarity=-0.034 Sum_probs=17.4
Q ss_pred CCCchhHHHHHHHHHHHHHHHH
Q 014832 195 LGPVAPFDAAACFLAIGMVIIL 216 (417)
Q Consensus 195 ~gw~~~f~~~~~~~~~~~~~~~ 216 (417)
.|||....+.+++.++.+.+..
T Consensus 3 rg~r~~~~~ggfVg~iG~a~Yp 24 (58)
T PF15061_consen 3 RGWRYALFVGGFVGLIGAALYP 24 (58)
T ss_pred ccccchhhHHHHHHHHHHHHhh
Confidence 3899999998888888776544
No 312
>COG2119 Predicted membrane protein [Function unknown]
Probab=27.22 E-value=3.6e+02 Score=22.27 Aligned_cols=29 Identities=28% Similarity=0.331 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccchHHHHHH
Q 014832 291 MLASMLGSSLASRLMARSPPRVESYMQIVFV 321 (417)
Q Consensus 291 ~~~~~~~~~~~g~l~dr~g~~~~~~l~~~~~ 321 (417)
.++++++.+.+.++++|+..| +....+..
T Consensus 144 ~l~s~laVl~G~~ia~ki~~r--~l~~~aal 172 (190)
T COG2119 144 ILASVLAVLLGKLIAGKLPER--LLRFIAAL 172 (190)
T ss_pred HHHHHHHHHHHHHHHccCCHH--HHHHHHHH
Confidence 467888888899999998766 44444333
No 313
>PF06781 UPF0233: Uncharacterised protein family (UPF0233); InterPro: IPR009619 This is a group of proteins of unknown function.
Probab=26.65 E-value=1e+02 Score=21.75 Aligned_cols=6 Identities=0% Similarity=-0.191 Sum_probs=3.0
Q ss_pred cccCCC
Q 014832 220 TENYGD 225 (417)
Q Consensus 220 ~~~~~~ 225 (417)
||++.+
T Consensus 2 PkSk~r 7 (87)
T PF06781_consen 2 PKSKVR 7 (87)
T ss_pred CCcccc
Confidence 555444
No 314
>PRK11588 hypothetical protein; Provisional
Probab=26.11 E-value=6.4e+02 Score=24.79 Aligned_cols=38 Identities=11% Similarity=-0.014 Sum_probs=20.5
Q ss_pred cccccccCchHHHH--HHHHHHHHHHH-HhcCchHHHHHHH
Q 014832 93 GSLADKQGRKRACV--TYCLTYILSCI-TKHSPQYKILMIG 130 (417)
Q Consensus 93 G~l~Dr~Grr~~~~--~~~~~~~~~~~-~~~~~~~~~l~~~ 130 (417)
+++.+|++.|..++ +...+++++.. .+++.+...++-.
T Consensus 137 ~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f~pi 177 (506)
T PRK11588 137 LALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAFAII 177 (506)
T ss_pred HHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 56678887664333 33445555555 6666554444333
No 315
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=25.78 E-value=4.7e+02 Score=23.16 Aligned_cols=48 Identities=8% Similarity=-0.076 Sum_probs=21.5
Q ss_pred cCCCcchHHHHHHHHHHHHhhhhccccccccccCc-hHH--HHHHHHHHHHHHH
Q 014832 67 YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR-KRA--CVTYCLTYILSCI 117 (417)
Q Consensus 67 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Gr-r~~--~~~~~~~~~~~~~ 117 (417)
.+.|+.+.=+-. .+++.+++.+.....++--+ |+. =+++-++++++.+
T Consensus 160 ~~~~~~~~~lPq---aiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ignl 210 (269)
T PF06800_consen 160 FHVSGWSAFLPQ---AIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIGNL 210 (269)
T ss_pred cCCChhHhHHHH---HHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHHHH
Confidence 556655443333 34444444454443333222 221 1334556666666
No 316
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=25.77 E-value=1.1e+02 Score=22.59 Aligned_cols=46 Identities=15% Similarity=0.105 Sum_probs=36.2
Q ss_pred chHHHHHHHHHHHHhhhhccccccccccCchHHHHHHHHHHHHHHH
Q 014832 72 GEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCLTYILSCI 117 (417)
Q Consensus 72 ~~~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~~ 117 (417)
+..|-+..++.-.+...++.+++..|+.-+.+-=.++..+..++..
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~ 99 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVA 99 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHH
Confidence 5567788888888889999999999998877766667666666555
No 317
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=25.40 E-value=61 Score=24.89 Aligned_cols=18 Identities=6% Similarity=-0.066 Sum_probs=7.8
Q ss_pred chhHHHHHHHHHHHHHHH
Q 014832 3 MFFYLVFGALGAVVAALE 20 (417)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~ 20 (417)
|-++++|+++++++++..
T Consensus 2 W~l~~iii~~i~l~~~~~ 19 (130)
T PF12273_consen 2 WVLFAIIIVAILLFLFLF 19 (130)
T ss_pred eeeHHHHHHHHHHHHHHH
Confidence 334444444444444443
No 318
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism]
Probab=25.28 E-value=6e+02 Score=24.19 Aligned_cols=31 Identities=13% Similarity=0.041 Sum_probs=16.0
Q ss_pred hHHHHHHHHHHHhhhccchhHHHHHhhcCCc
Q 014832 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYIPE 382 (417)
Q Consensus 352 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~ 382 (417)
+...+..+++.++.-...|.......+..++
T Consensus 195 ~~~~ipv~vfsF~~h~~i~si~~~~~~~~~~ 225 (415)
T COG0814 195 LLLAIPVFVFSFGFHGNIPSLVNYMRKNSKK 225 (415)
T ss_pred HHHHhhHHHhhhhCCccchHHHHHhccchhH
Confidence 4445555666665554445555554444443
No 319
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=25.16 E-value=5.7e+02 Score=23.91 Aligned_cols=29 Identities=21% Similarity=0.156 Sum_probs=24.4
Q ss_pred chhHHHHHHHHHHHhhhccchhHHHHHhh
Q 014832 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQ 378 (417)
Q Consensus 350 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 378 (417)
+.+++.....+.|...|+-.|..+.+.+.
T Consensus 104 ~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 104 SRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 44677788888999999999999998887
No 320
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=25.00 E-value=2.2e+02 Score=23.71 Aligned_cols=16 Identities=19% Similarity=0.285 Sum_probs=10.3
Q ss_pred hccccccccccCchHH
Q 014832 89 GTIVGSLADKQGRKRA 104 (417)
Q Consensus 89 ~~~~G~l~Dr~Grr~~ 104 (417)
.+..+...|||||+-+
T Consensus 152 ~p~i~~~leryg~~l~ 167 (191)
T PF03596_consen 152 IPIIAEFLERYGRWLV 167 (191)
T ss_pred ChHHHHHHHHhcccHH
Confidence 3455677788887643
No 321
>PF03222 Trp_Tyr_perm: Tryptophan/tyrosine permease family; InterPro: IPR018227 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [, , ]. Aromatic amino acids are concentrated in the cytoplasm of Escherichia coli by 4 distinct transport systems: a general aromatic amino acid permease, and a specific permease for each of the 3 types (Phe, Tyr and Trp) []. It has been shown [] that some permeases in E. coli and related bacteria are evolutionary related. These permeases are proteins of about 400 to 420 amino acids and are located in the cytoplasmic membrane and, like bacterial sugar/cation transporters, are thought to contain 12 transmembrane (TM) regions [] - hydropathy analysis, however, is inconclusive, suggesting the possibility of 10 to 12 membrane-spanning domains []. The best conserved domain is a stretch of 20 residues which seems to be located in a cytoplasmic loop between the first and second transmembrane region.
Probab=23.41 E-value=6.3e+02 Score=23.81 Aligned_cols=29 Identities=24% Similarity=0.135 Sum_probs=15.8
Q ss_pred chhHHHHHHHHHHHhhhccchhHHHHHhh
Q 014832 350 SGSLQLLGFCTFEACVGIFWPSIMKMRSQ 378 (417)
Q Consensus 350 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 378 (417)
......+...+..+++....|....+..+
T Consensus 184 ~~~~~~lPv~~~Sf~f~~ivPsl~~~~~~ 212 (394)
T PF03222_consen 184 SYILPALPVLVFSFGFHNIVPSLVKYLGG 212 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhCc
Confidence 33444555666666665555655555443
No 322
>TIGR02123 TRAP_fused TRAP transporter, 4TM/12TM fusion protein. In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This model describes such transporters, found in the Archaea and in Bacteria.
Probab=22.86 E-value=8.1e+02 Score=24.85 Aligned_cols=26 Identities=12% Similarity=0.190 Sum_probs=16.3
Q ss_pred HHhhhcccchhhhHHHHHHHHHHHHH
Q 014832 149 LVAEHNKRGFEQQWLSITFSKAIFLG 174 (417)
Q Consensus 149 ~i~~~~~r~~~~~~~~~~~~~~~~~g 174 (417)
.+.+.+|+|++.+........+...|
T Consensus 234 tiP~Mkk~GY~~~~Aaav~AaastlG 259 (613)
T TIGR02123 234 TIPLMKRAGYKPEFAGAVEAAASTGG 259 (613)
T ss_pred HHHHHHHcCCCHHHHHHHHHHhhhcc
Confidence 45666888888777665544444443
No 323
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=22.57 E-value=2.3e+02 Score=19.41 Aligned_cols=26 Identities=8% Similarity=0.231 Sum_probs=17.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhccc
Q 014832 196 GPVAPFDAAACFLAIGMVIILSSWTE 221 (417)
Q Consensus 196 gw~~~f~~~~~~~~~~~~~~~~~~~~ 221 (417)
+.+..+++.++..++++++..+.||-
T Consensus 33 ~~~~~~~~~~~g~~~~~lv~vP~Wp~ 58 (76)
T PF06645_consen 33 SFSYTFYIYGAGVVLTLLVVVPPWPF 58 (76)
T ss_pred HHHHHHHHHHHHHHHHHhheeCCcHh
Confidence 34677777777767776666655554
No 324
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=22.49 E-value=5.7e+02 Score=22.95 Aligned_cols=72 Identities=21% Similarity=0.209 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhhhhccccccccccCch--HHHHHHHHHHHHHH----H-HhcCc---hHHHHHHHHHHHHHHhhhhhh
Q 014832 74 IGQLFIAGFGSSMLFGTIVGSLADKQGRK--RACVTYCLTYILSC----I-TKHSP---QYKILMIGRILGGIATSLLFS 143 (417)
Q Consensus 74 ~g~~~s~~~~~~~~~~~~~G~l~Dr~Grr--~~~~~~~~~~~~~~----~-~~~~~---~~~~l~~~r~l~G~~~~~~~~ 143 (417)
-|.+++.++++..+|+-+..++..|-..| ..+.+..+...... + ...++ +...-+++-.+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48899999999999998888887765443 33444433333322 2 22222 222234455555666777788
Q ss_pred hH
Q 014832 144 AF 145 (417)
Q Consensus 144 ~~ 145 (417)
..
T Consensus 364 Si 365 (454)
T KOG4332|consen 364 SI 365 (454)
T ss_pred HH
Confidence 76
No 325
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=22.07 E-value=5.8e+02 Score=22.86 Aligned_cols=33 Identities=21% Similarity=0.473 Sum_probs=17.2
Q ss_pred HHHHhccchhHHHHHHHHHHHhHHHHHHHhhhcc
Q 014832 240 AVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA 273 (417)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (417)
.+++.|+|+.+.............. ....|.|.
T Consensus 62 ~~~~~~~p~~~~~~~l~a~li~~nW-~lfiWAvn 94 (293)
T COG2962 62 LKQLLKQPKTLLMLALTALLIGLNW-WLFIWAVN 94 (293)
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHH-HHhheecC
Confidence 4456777776666555544444433 22335543
No 326
>COG1971 Predicted membrane protein [Function unknown]
Probab=21.23 E-value=4.8e+02 Score=21.65 Aligned_cols=32 Identities=16% Similarity=0.010 Sum_probs=18.4
Q ss_pred HhhhhccccccccccCchHHHHHHHHHHHHHH
Q 014832 85 SMLFGTIVGSLADKQGRKRACVTYCLTYILSC 116 (417)
Q Consensus 85 ~~~~~~~~G~l~Dr~Grr~~~~~~~~~~~~~~ 116 (417)
..++..++.++...+|.|.-++-+.++..++.
T Consensus 150 ~~~G~~IG~~~g~~~g~~ae~lgGiiLI~~G~ 181 (190)
T COG1971 150 SALGAIIGRKLGKFLGKYAEILGGIILIGIGV 181 (190)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33334444455555667777777766666554
No 327
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=20.25 E-value=6.1e+02 Score=22.43 Aligned_cols=95 Identities=17% Similarity=0.171 Sum_probs=48.6
Q ss_pred HHHHHHHHHhhhhccccccccc-cCchHHHH----HHHHHHHHHHHH--hcCc----hHHHHHHHHHHHHHHhhhhhhhH
Q 014832 77 LFIAGFGSSMLFGTIVGSLADK-QGRKRACV----TYCLTYILSCIT--KHSP----QYKILMIGRILGGIATSLLFSAF 145 (417)
Q Consensus 77 ~~s~~~~~~~~~~~~~G~l~Dr-~Grr~~~~----~~~~~~~~~~~~--~~~~----~~~~l~~~r~l~G~~~~~~~~~~ 145 (417)
..-++..+..+|....|.+... +.||+-+. .+.++..++.++ .... +...+++.-++.|++.=+..
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ--- 222 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ--- 222 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh---
Confidence 3444556666777778887764 34555443 223344444332 2222 35667777777776643332
Q ss_pred HHHHHh-hhcccchhhhHHHHHHHHHHHHHH
Q 014832 146 ESWLVA-EHNKRGFEQQWLSITFSKAIFLGN 175 (417)
Q Consensus 146 ~~~~i~-~~~~r~~~~~~~~~~~~~~~~~g~ 175 (417)
+.++. .+|.++..++.....++....+|+
T Consensus 223 -~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY 252 (267)
T PF07672_consen 223 -GVILNLPHEYKGYNPKKIGIQFGLIWGFGY 252 (267)
T ss_pred -HHHhcChhhhcCCCcceehhHHHHHHHHHH
Confidence 33322 223344445555555555555544
No 328
>PRK00159 putative septation inhibitor protein; Reviewed
Probab=20.15 E-value=1.6e+02 Score=20.78 Aligned_cols=7 Identities=0% Similarity=-0.192 Sum_probs=3.4
Q ss_pred cccCCCC
Q 014832 220 TENYGDP 226 (417)
Q Consensus 220 ~~~~~~~ 226 (417)
||++.++
T Consensus 2 PkSK~RK 8 (87)
T PRK00159 2 PKSKVRK 8 (87)
T ss_pred CCccccC
Confidence 5555443
No 329
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=20.11 E-value=7.9e+02 Score=23.69 Aligned_cols=29 Identities=7% Similarity=-0.021 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHhhhccchhHHHHHhhcC
Q 014832 352 SLQLLGFCTFEACVGIFWPSIMKMRSQYI 380 (417)
Q Consensus 352 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 380 (417)
.+..+...++.+++....|....+-.|.+
T Consensus 211 l~~~iPv~v~SF~f~~iIssl~~y~r~~y 239 (443)
T PRK13629 211 VWLGISIMVFSFNFSPIVSSFVVSKREEY 239 (443)
T ss_pred HHHHHHHHHHHHhccccchHHHHHHHHHh
Confidence 34455667778887777788777766666
Done!