BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014833
(417 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SLG9|PI5K5_ARATH Phosphatidylinositol 4-phosphate 5-kinase 5 OS=Arabidopsis thaliana
GN=PIP5K5 PE=2 SV=1
Length = 772
Score = 38.5 bits (88), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 51/190 (26%)
Query: 31 IEILKRLQRESFSEQMKQRDR---LDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAV 87
+ + RLQ+ + E ++Q D+ + ER++ Y L G F+EAS V E+ GA
Sbjct: 593 LNFIFRLQKAWYQEFIRQIDKDCEFLEQERIMD-YSLLVGIHFREAS--VAGELIPSGAR 649
Query: 88 LMMGDIDQQHADALDRAEV-------------RTGIHTRFTFETTMRQNDTLVADFVACQ 134
+G+ +++ L RAEV R G + E TMR+ND+ +
Sbjct: 650 TPIGESEEESGPRLSRAEVDELLSDPSRWASIRLGTNMPARAERTMRKNDSEL------- 702
Query: 135 EGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGA--QCRDFDIARNYSHKAKGL-- 190
+ VG +G FY + + G +D+DI++ H K +
Sbjct: 703 ---QLVGEPTGE----------------FYEVVMIFGIIDILQDYDISKKLEHAYKSIQY 743
Query: 191 --TTISSLDP 198
++IS++DP
Sbjct: 744 DPSSISAVDP 753
>sp|Q9M1K2|PI5K4_ARATH Phosphatidylinositol 4-phosphate 5-kinase 4 OS=Arabidopsis thaliana
GN=PIP5K4 PE=1 SV=1
Length = 779
Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 47/193 (24%)
Query: 31 IEILKRLQRESFSEQMKQRDR---LDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAV 87
+ + RLQ+ + E ++Q D+ + ER++ Y L G F+EAS V E+ GA
Sbjct: 600 LNFIFRLQKAWYQEFIRQVDKDCEFLEQERIMD-YSLLVGIHFREAS--VAGELIPSGAR 656
Query: 88 LMMGDIDQQHADALDRAEV-------------RTGIHTRFTFETTMRQNDTLVADFVACQ 134
+G+ + + A L RA+V R G + E TMR++D C+
Sbjct: 657 TPIGEFEDESAPRLSRADVDQLLSDPTRWASIRLGGNMPARAERTMRRSD--------CE 708
Query: 135 EGGKNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRDFDIARNYSHKAKGL---- 190
+ VG +G + + + ++ +D+DI++ H K +
Sbjct: 709 --FQLVGEPTGEYYEVVMIFGIIDI--------------LQDYDISKKLEHAYKSIQYDP 752
Query: 191 TTISSLDPPLLSQ 203
T+IS++DP L S+
Sbjct: 753 TSISAVDPRLYSR 765
>sp|Q4UAQ0|PURA_THEAN Adenylosuccinate synthetase OS=Theileria annulata GN=TA17235 PE=3
SV=1
Length = 468
Score = 35.8 bits (81), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 129 DFVACQEGGKNVGNISGRS-----LSLAKLSYVANVG--DWFYAIAVPVGAQCRDFDIAR 181
++V Q+ G VG +GR+ L L YV D + V +Q + +
Sbjct: 300 NYVKLQKHGSEVGVTTGRTRRCGWLDLVSAKYVQGFSGFDVINLTKLDVLSQFDEVKLCT 359
Query: 182 NYSHKAKGLTTISSLDPPLLSQHN 205
NY HK G TT+ +L PP HN
Sbjct: 360 NYKHKVTG-TTLKNLLPPFRYLHN 382
>sp|O84734|SYS_CHLTR Serine--tRNA ligase OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=serS PE=3 SV=1
Length = 428
Score = 32.3 bits (72), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 31 IEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMM 90
I ++++ +E S +++++D +ERLL K + + S + A+ VL +
Sbjct: 4 IRLIRKEPKECES-RLQKKDPAISLERLLDLDKTVRQ--LKADSEALLAKRKVLSGQIHK 60
Query: 91 GDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVA 132
+ ++ADAL + EV T FETT+++ + L+ D +A
Sbjct: 61 AKVANENADALIQ-EVNTIADQLVAFETTLQEQEALLEDLMA 101
>sp|Q3KKW5|SYS_CHLTA Serine--tRNA ligase OS=Chlamydia trachomatis serovar A (strain
HAR-13 / ATCC VR-571B) GN=serS PE=3 SV=1
Length = 428
Score = 32.3 bits (72), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 31 IEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMM 90
I ++++ +E S +++++D +ERLL K + + S + A+ VL +
Sbjct: 4 IRLIRKEPKECES-RLQKKDPAISLERLLDLDKTVRQ--LKADSEALLAKRKVLSGQIHK 60
Query: 91 GDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVA 132
+ ++ADAL + EV T FETT+++ + L+ D +A
Sbjct: 61 AKVANENADALIQ-EVNTIADQLVAFETTLQEQEALLEDLMA 101
>sp|B0BAI4|SYS_CHLTB Serine--tRNA ligase OS=Chlamydia trachomatis serovar L2b (strain
UCH-1/proctitis) GN=serS PE=3 SV=1
Length = 428
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 31 IEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMM 90
I ++++ +E S +++++D +ERLL K + + S + A+ VL +
Sbjct: 4 IRLIRKEPKECES-RLQKKDPAISLERLLDLDKTVRQ--LKADSEALLAKRKVLSGQIHK 60
Query: 91 GDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVA 132
+ ++ADAL + EV T FETT+++ + L+ D +A
Sbjct: 61 AKVANENADALIQ-EVNTIADQLVAFETTLQEQEALLEDLMA 101
>sp|B0B8V5|SYS_CHLT2 Serine--tRNA ligase OS=Chlamydia trachomatis serovar L2 (strain
434/Bu / ATCC VR-902B) GN=serS PE=3 SV=1
Length = 428
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 31 IEILKRLQRESFSEQMKQRDRLDKVERLLSFYKLSKGSPFQEASTHVRAEVDVLGAVLMM 90
I ++++ +E S +++++D +ERLL K + + S + A+ VL +
Sbjct: 4 IRLIRKEPKECES-RLQKKDPAISLERLLDLDKTVRQ--LKADSEALLAKRKVLSGQIHK 60
Query: 91 GDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFVA 132
+ ++ADAL + EV T FETT+++ + L+ D +A
Sbjct: 61 AKVANENADALIQ-EVNTIADQLVAFETTLQEQEALLEDLMA 101
>sp|A2BPV5|SYE_PROMS Glutamate--tRNA ligase OS=Prochlorococcus marinus (strain AS9601)
GN=gltX PE=3 SV=1
Length = 476
Score = 32.0 bits (71), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 15/185 (8%)
Query: 16 DSLFHRSQNSYSRNPIEILKRLQRESFSEQMKQRDRL----DKVERLLSFYKLSKGSPFQ 71
D+ F RS++ Y++N ++ LK L + E +KQ DR+ +++LL + +
Sbjct: 43 DTDFLRSKSEYTKNILQGLKWLGLKWDEEPIKQSDRISIHKSHIKKLLECGAAYRCFTSE 102
Query: 72 EASTHVRAEVDVLGAVLMMGDIDQQHADALDRAEVRTGIHTRFTFETTMRQNDTLVADFV 131
+ + +R E G + D +H +L + E+ T I T + ++ +V ++
Sbjct: 103 DEISELREEQKKKG---LPPKHDNRHR-SLSKEEIETFISQGRTSVIRFKIDEKIVIKWI 158
Query: 132 ACQEGG-KNVGNISGRSLSLAKLSYVANVGDWFYAIAVPVGAQCRDFDIARNYSHKAKGL 190
G K G G L L++ + +GD Y +AV V D N +H +G
Sbjct: 159 DQIRGEIKWQGKDLGGDLVLSRRAKGYEIGDPLYNLAVVVD------DNFMNITHVVRGE 212
Query: 191 TTISS 195
IS+
Sbjct: 213 DHISN 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,531,931
Number of Sequences: 539616
Number of extensions: 5781683
Number of successful extensions: 14044
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 14043
Number of HSP's gapped (non-prelim): 15
length of query: 417
length of database: 191,569,459
effective HSP length: 120
effective length of query: 297
effective length of database: 126,815,539
effective search space: 37664215083
effective search space used: 37664215083
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)