Query 014834
Match_columns 417
No_of_seqs 482 out of 2183
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 18:39:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014834.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014834hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fr7_A Putative ketol-acid red 100.0 5.3E-81 1.8E-85 648.4 26.3 346 68-413 11-357 (525)
2 3ulk_A Ketol-acid reductoisome 100.0 2.5E-73 8.6E-78 582.4 27.9 314 71-416 2-331 (491)
3 1np3_A Ketol-acid reductoisome 100.0 1.3E-38 4.3E-43 317.7 24.1 281 106-409 12-298 (338)
4 3tri_A Pyrroline-5-carboxylate 100.0 4.1E-33 1.4E-37 271.0 20.7 221 112-366 4-235 (280)
5 3gt0_A Pyrroline-5-carboxylate 100.0 1.1E-30 3.7E-35 247.8 16.9 221 112-367 3-234 (247)
6 2izz_A Pyrroline-5-carboxylate 99.9 1.1E-24 3.7E-29 215.0 19.5 222 112-366 23-257 (322)
7 2rcy_A Pyrroline carboxylate r 99.9 2.3E-22 8E-27 190.4 21.6 213 112-366 5-227 (262)
8 2ahr_A Putative pyrroline carb 99.9 2E-22 6.8E-27 191.1 19.6 217 111-366 3-226 (259)
9 1yqg_A Pyrroline-5-carboxylate 99.9 3.7E-22 1.3E-26 189.1 20.7 216 112-366 1-225 (263)
10 3c24_A Putative oxidoreductase 99.9 3.8E-20 1.3E-24 178.6 20.8 211 111-352 11-241 (286)
11 3b1f_A Putative prephenate deh 99.8 8.4E-21 2.9E-25 182.8 12.7 230 111-367 6-247 (290)
12 2g5c_A Prephenate dehydrogenas 99.8 7.1E-21 2.4E-25 182.5 10.7 266 111-406 1-275 (281)
13 3ggo_A Prephenate dehydrogenas 99.8 1.8E-19 6.1E-24 178.0 13.9 209 112-343 34-249 (314)
14 2pv7_A T-protein [includes: ch 99.8 1.3E-18 4.5E-23 169.7 18.4 208 112-366 22-235 (298)
15 2f1k_A Prephenate dehydrogenas 99.8 5.2E-18 1.8E-22 162.2 20.5 231 112-366 1-234 (279)
16 3ktd_A Prephenate dehydrogenas 99.8 1.6E-18 5.4E-23 173.8 15.3 204 112-343 9-228 (341)
17 2i76_A Hypothetical protein; N 99.7 2.5E-17 8.6E-22 158.7 9.2 213 112-366 3-218 (276)
18 3d1l_A Putative NADP oxidoredu 99.7 7.9E-16 2.7E-20 146.2 17.2 210 108-349 8-220 (266)
19 2dpo_A L-gulonate 3-dehydrogen 99.6 1.3E-14 4.5E-19 143.9 19.3 194 111-338 6-224 (319)
20 4e12_A Diketoreductase; oxidor 99.6 2.4E-14 8.1E-19 138.5 19.1 213 111-360 4-246 (283)
21 3dtt_A NADP oxidoreductase; st 99.6 4.2E-15 1.4E-19 140.9 13.2 161 104-287 13-206 (245)
22 3ulk_A Ketol-acid reductoisome 99.6 2.3E-16 8E-21 162.2 2.8 103 301-409 353-455 (491)
23 3obb_A Probable 3-hydroxyisobu 99.6 4.9E-15 1.7E-19 145.7 11.8 197 111-337 3-207 (300)
24 2h78_A Hibadh, 3-hydroxyisobut 99.6 3.3E-14 1.1E-18 137.7 16.1 196 111-340 3-210 (302)
25 4huj_A Uncharacterized protein 99.6 1.7E-14 5.8E-19 134.6 13.0 154 111-287 23-192 (220)
26 1f0y_A HCDH, L-3-hydroxyacyl-C 99.6 2.5E-13 8.7E-18 131.9 21.1 217 111-361 15-261 (302)
27 3qsg_A NAD-binding phosphogluc 99.6 4.3E-14 1.5E-18 138.8 15.5 95 111-215 24-120 (312)
28 2ew2_A 2-dehydropantoate 2-red 99.6 1E-13 3.4E-18 133.1 17.7 153 111-287 3-177 (316)
29 3k6j_A Protein F01G10.3, confi 99.5 7.7E-13 2.6E-17 137.5 22.2 229 69-338 13-266 (460)
30 3dfu_A Uncharacterized protein 99.5 2.8E-13 9.5E-18 129.3 17.0 153 112-324 7-160 (232)
31 3pef_A 6-phosphogluconate dehy 99.5 1.3E-13 4.5E-18 132.8 14.4 197 112-340 2-208 (287)
32 3pdu_A 3-hydroxyisobutyrate de 99.5 1.5E-13 5.2E-18 132.4 14.1 198 111-340 1-208 (287)
33 3doj_A AT3G25530, dehydrogenas 99.5 2.2E-13 7.5E-18 133.3 15.3 198 111-340 21-228 (310)
34 3g0o_A 3-hydroxyisobutyrate de 99.5 4.4E-13 1.5E-17 130.5 15.5 200 112-340 8-216 (303)
35 2uyy_A N-PAC protein; long-cha 99.5 2.5E-13 8.4E-18 132.3 13.6 199 112-342 31-239 (316)
36 2gf2_A Hibadh, 3-hydroxyisobut 99.5 1.8E-13 6.3E-18 131.4 12.4 202 112-339 1-206 (296)
37 3mog_A Probable 3-hydroxybutyr 99.5 6.8E-13 2.3E-17 138.6 17.5 213 111-359 5-243 (483)
38 4gbj_A 6-phosphogluconate dehy 99.5 1.6E-13 5.3E-18 134.5 11.2 198 112-340 6-211 (297)
39 3l6d_A Putative oxidoreductase 99.5 1.5E-12 5.1E-17 127.3 17.6 199 112-341 10-214 (306)
40 1jay_A Coenzyme F420H2:NADP+ o 99.5 1.3E-13 4.5E-18 126.3 8.9 176 112-321 1-200 (212)
41 1zej_A HBD-9, 3-hydroxyacyl-CO 99.4 7.5E-12 2.5E-16 123.0 21.5 201 112-359 13-230 (293)
42 3qha_A Putative oxidoreductase 99.4 1.2E-12 4.2E-17 127.2 15.8 188 112-334 16-212 (296)
43 2cvz_A Dehydrogenase, 3-hydrox 99.4 4.6E-13 1.6E-17 127.8 11.6 193 111-342 1-204 (289)
44 1z82_A Glycerol-3-phosphate de 99.4 7.6E-13 2.6E-17 130.3 12.6 143 112-286 15-173 (335)
45 2zyd_A 6-phosphogluconate dehy 99.4 1.8E-12 6.2E-17 135.1 15.6 192 112-339 16-232 (480)
46 1vpd_A Tartronate semialdehyde 99.4 1.5E-12 5.1E-17 125.2 13.9 197 112-342 6-214 (299)
47 2p4q_A 6-phosphogluconate dehy 99.4 1.3E-12 4.5E-17 136.8 14.3 191 112-339 11-227 (497)
48 1evy_A Glycerol-3-phosphate de 99.4 1.6E-12 5.4E-17 129.3 14.1 150 112-285 16-189 (366)
49 1txg_A Glycerol-3-phosphate de 99.4 3.4E-12 1.2E-16 124.3 15.4 155 112-287 1-175 (335)
50 3k96_A Glycerol-3-phosphate de 99.4 5.5E-12 1.9E-16 126.7 17.1 152 112-286 30-198 (356)
51 4dll_A 2-hydroxy-3-oxopropiona 99.4 3.6E-12 1.2E-16 125.3 15.3 195 112-339 32-235 (320)
52 1x0v_A GPD-C, GPDH-C, glycerol 99.4 7.9E-12 2.7E-16 123.2 17.2 149 112-287 9-192 (354)
53 1yj8_A Glycerol-3-phosphate de 99.4 7.3E-12 2.5E-16 125.3 17.1 148 111-286 21-208 (375)
54 1i36_A Conserved hypothetical 99.4 3.6E-12 1.2E-16 120.6 13.8 185 112-341 1-196 (264)
55 4ezb_A Uncharacterized conserv 99.4 7.6E-12 2.6E-16 123.2 16.5 93 112-216 25-125 (317)
56 3cky_A 2-hydroxymethyl glutara 99.4 6.7E-12 2.3E-16 120.8 15.5 196 112-342 5-213 (301)
57 1ygy_A PGDH, D-3-phosphoglycer 99.4 4.6E-13 1.6E-17 141.1 7.5 167 92-287 123-307 (529)
58 1yb4_A Tartronic semialdehyde 99.4 3.5E-12 1.2E-16 122.2 13.0 196 111-342 3-211 (295)
59 2iz1_A 6-phosphogluconate dehy 99.4 1.6E-11 5.4E-16 127.5 18.5 193 112-339 6-223 (474)
60 2yjz_A Metalloreductase steap4 99.1 5.5E-14 1.9E-18 130.4 0.0 151 108-287 17-176 (201)
61 4e21_A 6-phosphogluconate dehy 99.3 1.9E-11 6.6E-16 123.0 17.1 151 107-286 19-175 (358)
62 2qyt_A 2-dehydropantoate 2-red 99.3 1.4E-12 4.8E-17 125.8 8.4 210 112-332 9-249 (317)
63 2ekl_A D-3-phosphoglycerate de 99.3 2.4E-12 8.1E-17 127.3 9.7 162 92-277 125-295 (313)
64 1ks9_A KPA reductase;, 2-dehyd 99.3 3.7E-12 1.3E-16 121.0 10.5 193 112-331 1-222 (291)
65 2pgd_A 6-phosphogluconate dehy 99.3 7.9E-12 2.7E-16 130.0 13.0 148 112-287 3-162 (482)
66 1wdk_A Fatty oxidation complex 99.3 6E-11 2E-15 129.2 19.5 148 111-287 314-488 (715)
67 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.3 2.7E-11 9.2E-16 126.1 15.8 149 112-287 2-164 (478)
68 1wwk_A Phosphoglycerate dehydr 99.3 9.1E-12 3.1E-16 122.8 10.8 159 93-277 124-293 (307)
69 4gwg_A 6-phosphogluconate dehy 99.3 9.4E-11 3.2E-15 122.6 17.7 149 111-287 4-164 (484)
70 1zcj_A Peroxisomal bifunctiona 99.3 2.8E-10 9.4E-15 117.9 20.9 208 111-356 37-268 (463)
71 1gdh_A D-glycerate dehydrogena 99.3 5.9E-12 2E-16 124.8 7.8 161 92-278 124-299 (320)
72 2raf_A Putative dinucleotide-b 99.2 1.2E-11 4.1E-16 114.6 7.9 138 106-286 15-169 (209)
73 3hn2_A 2-dehydropantoate 2-red 99.2 6.6E-11 2.3E-15 115.6 13.4 152 112-287 3-172 (312)
74 4dgs_A Dehydrogenase; structur 99.2 3.3E-11 1.1E-15 120.8 9.9 104 91-212 149-258 (340)
75 3gg9_A D-3-phosphoglycerate de 99.2 2.4E-11 8.3E-16 122.2 8.8 107 93-212 132-251 (352)
76 2pi1_A D-lactate dehydrogenase 99.2 2.1E-11 7.2E-16 121.7 8.2 105 93-212 122-230 (334)
77 2g76_A 3-PGDH, D-3-phosphoglyc 99.2 3.4E-11 1.1E-15 120.4 9.6 158 92-276 146-314 (335)
78 2vns_A Metalloreductase steap3 99.2 5.9E-11 2E-15 110.3 10.6 149 112-287 29-188 (215)
79 1mv8_A GMD, GDP-mannose 6-dehy 99.2 6.2E-10 2.1E-14 114.0 18.6 200 112-337 1-244 (436)
80 4e5n_A Thermostable phosphite 99.2 2.1E-11 7.3E-16 121.5 7.1 108 92-212 124-236 (330)
81 3jtm_A Formate dehydrogenase, 99.2 3.7E-11 1.3E-15 120.9 8.7 109 92-212 143-256 (351)
82 3gvx_A Glycerate dehydrogenase 99.2 2.7E-11 9.3E-16 118.9 7.2 102 93-212 106-209 (290)
83 2wtb_A MFP2, fatty acid multif 99.2 1.1E-09 3.8E-14 119.5 20.6 208 111-357 312-546 (725)
84 4hy3_A Phosphoglycerate oxidor 99.2 5.3E-11 1.8E-15 120.4 8.9 107 92-212 154-266 (365)
85 1mx3_A CTBP1, C-terminal bindi 99.2 3.4E-11 1.2E-15 120.8 7.4 107 93-212 143-259 (347)
86 1qp8_A Formate dehydrogenase; 99.2 3.9E-11 1.3E-15 118.2 7.7 104 92-213 106-211 (303)
87 4g2n_A D-isomer specific 2-hyd 99.1 6E-11 2.1E-15 119.1 8.7 107 92-212 151-263 (345)
88 2nac_A NAD-dependent formate d 99.1 6.5E-11 2.2E-15 120.8 8.8 109 92-212 170-283 (393)
89 2dbq_A Glyoxylate reductase; D 99.1 4.5E-11 1.5E-15 118.9 7.4 107 92-212 124-240 (334)
90 2j6i_A Formate dehydrogenase; 99.1 6.2E-11 2.1E-15 119.6 8.0 109 92-212 143-257 (364)
91 3gg2_A Sugar dehydrogenase, UD 99.1 1.1E-09 3.7E-14 113.3 17.3 202 112-338 3-247 (450)
92 3ba1_A HPPR, hydroxyphenylpyru 99.1 4.6E-11 1.6E-15 119.3 6.6 107 91-214 143-254 (333)
93 2cuk_A Glycerate dehydrogenase 99.1 5.6E-11 1.9E-15 117.4 7.0 154 92-276 122-288 (311)
94 2gcg_A Glyoxylate reductase/hy 99.1 1.1E-10 3.7E-15 115.9 8.4 108 92-212 133-246 (330)
95 2d0i_A Dehydrogenase; structur 99.1 7.2E-11 2.4E-15 117.6 6.4 106 92-212 121-235 (333)
96 2w2k_A D-mandelate dehydrogena 99.1 1.4E-10 4.7E-15 116.2 8.3 109 92-213 137-257 (348)
97 3i83_A 2-dehydropantoate 2-red 99.1 1.3E-09 4.6E-14 106.7 14.9 153 112-287 3-174 (320)
98 3pp8_A Glyoxylate/hydroxypyruv 99.1 3E-11 1E-15 119.8 3.0 105 93-212 123-229 (315)
99 3evt_A Phosphoglycerate dehydr 99.1 4.3E-11 1.5E-15 119.1 3.8 106 93-212 120-227 (324)
100 3hg7_A D-isomer specific 2-hyd 99.1 2.9E-11 1E-15 120.4 2.4 105 93-212 124-230 (324)
101 3hwr_A 2-dehydropantoate 2-red 99.1 1.8E-09 6E-14 106.0 14.7 101 112-221 20-131 (318)
102 2yq5_A D-isomer specific 2-hyd 99.0 1.6E-10 5.4E-15 116.0 6.8 104 93-212 128-236 (343)
103 1j4a_A D-LDH, D-lactate dehydr 99.0 3.2E-10 1.1E-14 112.9 8.4 106 92-212 127-235 (333)
104 3ghy_A Ketopantoate reductase 99.0 1.1E-09 3.7E-14 108.0 12.1 94 112-214 4-107 (335)
105 2o3j_A UDP-glucose 6-dehydroge 99.0 2.9E-09 9.8E-14 110.8 15.5 208 111-337 9-261 (481)
106 4a7p_A UDP-glucose dehydrogena 99.0 2.6E-09 8.8E-14 110.6 14.8 200 112-338 9-251 (446)
107 1sc6_A PGDH, D-3-phosphoglycer 99.0 2.4E-10 8.3E-15 116.9 7.0 105 92-212 126-233 (404)
108 2q3e_A UDP-glucose 6-dehydroge 99.0 3E-09 1E-13 110.0 15.3 208 111-337 5-255 (467)
109 1bg6_A N-(1-D-carboxylethyl)-L 99.0 1.7E-09 6E-14 105.9 11.7 96 112-214 5-111 (359)
110 3pid_A UDP-glucose 6-dehydroge 99.0 1.1E-08 3.9E-13 105.4 18.3 198 112-338 37-268 (432)
111 3k5p_A D-3-phosphoglycerate de 99.0 4.8E-10 1.6E-14 115.2 7.6 104 93-212 138-244 (416)
112 1xdw_A NAD+-dependent (R)-2-hy 99.0 4.1E-10 1.4E-14 112.1 6.7 105 92-212 126-234 (331)
113 1dxy_A D-2-hydroxyisocaproate 99.0 3.1E-10 1.1E-14 113.0 5.9 105 92-212 125-233 (333)
114 3ado_A Lambda-crystallin; L-gu 98.9 4E-08 1.4E-12 97.6 18.0 152 112-287 7-182 (319)
115 1dlj_A UDP-glucose dehydrogena 98.9 4.8E-08 1.6E-12 99.2 18.8 94 112-214 1-119 (402)
116 3c7a_A Octopine dehydrogenase; 98.8 7.5E-09 2.6E-13 104.2 9.2 94 111-211 2-115 (404)
117 3g79_A NDP-N-acetyl-D-galactos 98.8 1.1E-07 3.7E-12 99.3 18.0 202 110-336 17-268 (478)
118 3ojo_A CAP5O; rossmann fold, c 98.8 1.5E-07 5E-12 97.1 18.6 202 109-336 10-248 (431)
119 2y0c_A BCEC, UDP-glucose dehyd 98.8 1.8E-08 6.2E-13 104.9 11.0 95 110-215 7-131 (478)
120 3ego_A Probable 2-dehydropanto 98.8 2.7E-08 9.3E-13 97.2 11.1 110 112-234 3-119 (307)
121 2o4c_A Erythronate-4-phosphate 98.8 3.8E-09 1.3E-13 107.3 5.1 90 106-212 112-207 (380)
122 2hk9_A Shikimate dehydrogenase 98.8 4.7E-09 1.6E-13 101.2 5.0 96 107-213 126-222 (275)
123 3oet_A Erythronate-4-phosphate 98.7 3.7E-09 1.3E-13 107.5 4.1 151 106-287 115-284 (381)
124 3kb6_A D-lactate dehydrogenase 98.7 2E-08 7E-13 100.1 8.5 104 94-212 123-230 (334)
125 1y81_A Conserved hypothetical 98.7 2.6E-08 8.9E-13 87.3 7.9 110 112-243 15-128 (138)
126 3d4o_A Dipicolinate synthase s 98.7 4.1E-08 1.4E-12 95.3 10.0 94 106-212 151-244 (293)
127 2rir_A Dipicolinate synthase, 98.7 5.3E-08 1.8E-12 94.7 10.2 94 106-212 153-246 (300)
128 1v8b_A Adenosylhomocysteinase; 98.7 1.3E-08 4.3E-13 106.4 6.0 103 95-215 244-347 (479)
129 1lss_A TRK system potassium up 98.7 2E-07 6.8E-12 78.3 12.1 97 112-214 5-105 (140)
130 3d64_A Adenosylhomocysteinase; 98.7 1.3E-08 4.4E-13 106.6 5.3 99 99-214 267-366 (494)
131 4fgw_A Glycerol-3-phosphate de 98.6 3.1E-07 1E-11 93.7 14.6 97 112-214 35-154 (391)
132 3oj0_A Glutr, glutamyl-tRNA re 98.6 1.6E-08 5.3E-13 87.6 4.3 89 110-211 21-109 (144)
133 2i99_A MU-crystallin homolog; 98.6 4.1E-08 1.4E-12 96.4 7.6 91 112-215 136-229 (312)
134 3g17_A Similar to 2-dehydropan 98.6 3.5E-09 1.2E-13 102.5 -1.4 97 112-216 3-101 (294)
135 2duw_A Putative COA-binding pr 98.6 6.7E-08 2.3E-12 85.1 6.9 111 112-243 14-129 (145)
136 3h9u_A Adenosylhomocysteinase; 98.6 1E-07 3.4E-12 98.5 8.3 91 106-212 207-298 (436)
137 2d5c_A AROE, shikimate 5-dehyd 98.6 4.9E-08 1.7E-12 93.0 5.5 90 107-212 114-206 (263)
138 3zwc_A Peroxisomal bifunctiona 98.5 3.6E-06 1.2E-10 92.2 19.9 212 109-358 314-549 (742)
139 1hyh_A L-hicdh, L-2-hydroxyiso 98.5 5.1E-07 1.7E-11 88.1 10.1 95 111-216 1-127 (309)
140 3n58_A Adenosylhomocysteinase; 98.4 4.7E-07 1.6E-11 93.8 9.6 94 106-215 243-337 (464)
141 2b0j_A 5,10-methenyltetrahydro 98.4 1.2E-05 4.2E-10 78.7 18.0 176 159-363 126-310 (358)
142 3gvp_A Adenosylhomocysteinase 98.4 3.6E-07 1.2E-11 94.2 7.2 91 106-212 216-307 (435)
143 3euw_A MYO-inositol dehydrogen 98.4 1.4E-06 4.7E-11 85.6 10.4 80 112-200 5-87 (344)
144 3ce6_A Adenosylhomocysteinase; 98.4 8.7E-07 3E-11 92.9 9.5 92 107-214 271-363 (494)
145 1x7d_A Ornithine cyclodeaminas 98.4 3.7E-07 1.3E-11 91.5 6.3 96 112-215 130-229 (350)
146 3uuw_A Putative oxidoreductase 98.3 1.1E-06 3.6E-11 85.1 8.6 80 112-200 7-88 (308)
147 2dc1_A L-aspartate dehydrogena 98.3 1.8E-06 6.2E-11 80.8 9.2 78 112-211 1-80 (236)
148 3q2i_A Dehydrogenase; rossmann 98.3 1.8E-06 6.2E-11 85.2 9.6 80 112-199 14-96 (354)
149 4hkt_A Inositol 2-dehydrogenas 98.3 1.8E-06 6.3E-11 84.3 9.6 79 112-200 4-85 (331)
150 3e9m_A Oxidoreductase, GFO/IDH 98.3 2.1E-06 7.1E-11 84.2 9.8 81 112-200 6-89 (330)
151 2fp4_A Succinyl-COA ligase [GD 98.3 9.7E-07 3.3E-11 87.0 7.3 119 112-245 14-137 (305)
152 3llv_A Exopolyphosphatase-rela 98.3 7.3E-06 2.5E-10 69.9 11.5 95 112-213 7-105 (141)
153 3ezy_A Dehydrogenase; structur 98.3 1.8E-06 6E-11 85.0 8.5 79 112-199 3-85 (344)
154 2nu8_A Succinyl-COA ligase [AD 98.3 9E-07 3.1E-11 86.3 6.3 117 112-243 8-127 (288)
155 3mz0_A Inositol 2-dehydrogenas 98.3 2.5E-06 8.6E-11 83.9 9.5 79 112-199 3-87 (344)
156 3p2y_A Alanine dehydrogenase/p 98.2 1.4E-06 4.6E-11 88.7 7.3 97 108-212 182-302 (381)
157 2g1u_A Hypothetical protein TM 98.2 3.9E-06 1.3E-10 73.2 9.3 101 105-213 14-120 (155)
158 1oi7_A Succinyl-COA synthetase 98.2 1.3E-06 4.6E-11 85.2 6.8 117 112-243 8-127 (288)
159 2ho3_A Oxidoreductase, GFO/IDH 98.2 3E-06 1E-10 82.5 8.9 85 111-207 1-88 (325)
160 2vhw_A Alanine dehydrogenase; 98.2 1.7E-06 5.7E-11 87.2 7.1 99 106-212 164-268 (377)
161 3fwz_A Inner membrane protein 98.2 9.8E-06 3.4E-10 69.7 10.7 75 112-193 8-86 (140)
162 2glx_A 1,5-anhydro-D-fructose 98.2 4.5E-06 1.5E-10 81.2 9.4 86 112-209 1-90 (332)
163 1a5z_A L-lactate dehydrogenase 98.2 4.8E-06 1.6E-10 81.9 9.5 93 112-215 1-120 (319)
164 2d59_A Hypothetical protein PH 98.2 7.5E-06 2.6E-10 71.8 9.8 115 112-248 23-141 (144)
165 3db2_A Putative NADPH-dependen 98.2 3.5E-06 1.2E-10 83.2 8.6 79 112-199 6-87 (354)
166 3hdj_A Probable ornithine cycl 98.2 2E-06 7E-11 84.9 6.7 92 112-216 122-217 (313)
167 2hmt_A YUAA protein; RCK, KTN, 98.2 8.2E-06 2.8E-10 68.5 9.4 99 108-214 4-107 (144)
168 3cea_A MYO-inositol 2-dehydrog 98.1 8.2E-06 2.8E-10 79.8 10.3 86 112-209 9-99 (346)
169 4dio_A NAD(P) transhydrogenase 98.1 2.9E-06 9.9E-11 86.9 6.8 97 108-212 188-312 (405)
170 3c85_A Putative glutathione-re 98.1 1.8E-05 6.3E-10 70.4 11.3 93 106-205 35-132 (183)
171 1tlt_A Putative oxidoreductase 98.1 8.4E-06 2.9E-10 79.2 9.7 84 112-207 6-91 (319)
172 3evn_A Oxidoreductase, GFO/IDH 98.1 6.2E-06 2.1E-10 80.7 8.4 86 112-208 6-94 (329)
173 3ec7_A Putative dehydrogenase; 98.1 7.7E-06 2.6E-10 81.2 9.2 79 112-199 24-108 (357)
174 3rc1_A Sugar 3-ketoreductase; 98.1 8.6E-06 2.9E-10 80.6 9.2 80 112-200 28-111 (350)
175 3e18_A Oxidoreductase; dehydro 98.1 1.3E-05 4.3E-10 79.7 10.3 85 112-208 6-92 (359)
176 1xea_A Oxidoreductase, GFO/IDH 98.1 7.9E-06 2.7E-10 79.6 8.6 79 112-198 3-83 (323)
177 1lld_A L-lactate dehydrogenase 98.1 1E-05 3.5E-10 78.5 9.3 98 112-216 8-129 (319)
178 1iuk_A Hypothetical protein TT 98.1 9.1E-06 3.1E-10 71.1 8.0 117 112-248 14-134 (140)
179 2ewd_A Lactate dehydrogenase,; 98.1 1.3E-05 4.6E-10 78.4 10.1 91 112-214 5-124 (317)
180 3l4b_C TRKA K+ channel protien 98.1 1.8E-05 6.3E-10 72.6 10.4 96 112-213 1-101 (218)
181 3ic5_A Putative saccharopine d 98.1 2.6E-05 9E-10 63.3 10.2 92 112-213 6-101 (118)
182 3qy9_A DHPR, dihydrodipicolina 98.0 1.3E-05 4.4E-10 76.6 9.4 151 111-286 3-162 (243)
183 1omo_A Alanine dehydrogenase; 98.0 4.5E-06 1.5E-10 82.4 6.4 93 112-216 126-221 (322)
184 2egg_A AROE, shikimate 5-dehyd 98.0 4E-06 1.4E-10 81.9 5.3 76 107-191 138-217 (297)
185 3ohs_X Trans-1,2-dihydrobenzen 98.0 1.1E-05 3.7E-10 79.0 8.2 88 112-208 3-93 (334)
186 3u62_A Shikimate dehydrogenase 98.0 7.9E-07 2.7E-11 85.3 0.1 92 108-213 107-202 (253)
187 1x13_A NAD(P) transhydrogenase 98.0 1E-05 3.4E-10 82.4 7.3 98 107-212 169-292 (401)
188 4had_A Probable oxidoreductase 98.0 2.3E-05 7.8E-10 76.8 9.6 86 107-200 19-108 (350)
189 1gpj_A Glutamyl-tRNA reductase 97.9 2E-05 6.7E-10 80.0 9.2 74 108-190 165-239 (404)
190 3fr7_A Putative ketol-acid red 97.9 1.2E-05 4.1E-10 84.3 7.6 88 310-403 394-485 (525)
191 1ydw_A AX110P-like protein; st 97.9 2.8E-05 9.5E-10 76.9 9.4 90 112-209 7-99 (362)
192 3don_A Shikimate dehydrogenase 97.9 1.8E-06 6.2E-11 84.0 0.7 94 107-211 114-209 (277)
193 1l7d_A Nicotinamide nucleotide 97.9 2.3E-05 7.7E-10 79.0 8.6 98 107-212 169-294 (384)
194 2v6b_A L-LDH, L-lactate dehydr 97.9 3.1E-05 1E-09 75.7 9.3 93 112-215 1-120 (304)
195 3c1a_A Putative oxidoreductase 97.9 9.9E-06 3.4E-10 78.6 5.5 82 112-207 11-95 (315)
196 4fb5_A Probable oxidoreductase 97.9 3.3E-05 1.1E-09 75.8 8.9 91 106-199 18-115 (393)
197 3moi_A Probable dehydrogenase; 97.9 2.5E-05 8.5E-10 78.3 7.9 80 112-200 3-86 (387)
198 2p2s_A Putative oxidoreductase 97.8 6.9E-05 2.4E-09 73.2 10.8 85 112-209 5-95 (336)
199 2hjr_A Malate dehydrogenase; m 97.8 0.0001 3.4E-09 73.0 11.3 88 112-211 15-130 (328)
200 4h3v_A Oxidoreductase domain p 97.8 4.6E-05 1.6E-09 74.7 8.7 83 113-199 8-96 (390)
201 3dty_A Oxidoreductase, GFO/IDH 97.8 4.3E-05 1.5E-09 76.8 8.5 82 112-200 13-107 (398)
202 2z2v_A Hypothetical protein PH 97.8 2E-05 6.8E-10 79.2 6.0 94 109-213 15-109 (365)
203 3o8q_A Shikimate 5-dehydrogena 97.8 9.5E-06 3.3E-10 79.0 3.4 75 107-192 123-201 (281)
204 3ond_A Adenosylhomocysteinase; 97.8 5.8E-05 2E-09 78.9 9.5 92 107-214 262-354 (488)
205 3vtf_A UDP-glucose 6-dehydroge 97.8 5.8E-05 2E-09 78.2 9.2 91 111-212 21-144 (444)
206 1pzg_A LDH, lactate dehydrogen 97.8 0.00012 4.1E-09 72.5 11.2 93 112-211 10-131 (331)
207 2eez_A Alanine dehydrogenase; 97.8 4.6E-05 1.6E-09 76.2 8.3 99 106-212 162-266 (369)
208 1f06_A MESO-diaminopimelate D- 97.8 2.5E-05 8.6E-10 76.8 6.0 83 112-210 4-87 (320)
209 1id1_A Putative potassium chan 97.8 0.0002 6.7E-09 62.0 11.1 97 112-214 4-108 (153)
210 1h6d_A Precursor form of gluco 97.8 4.5E-05 1.5E-09 77.9 8.0 87 112-206 84-175 (433)
211 2aef_A Calcium-gated potassium 97.7 8.3E-05 2.8E-09 68.8 8.9 94 112-214 10-108 (234)
212 1guz_A Malate dehydrogenase; o 97.7 0.00015 5E-09 71.0 11.0 70 112-188 1-79 (310)
213 1leh_A Leucine dehydrogenase; 97.7 4.8E-05 1.6E-09 76.8 7.6 70 107-188 170-240 (364)
214 3bio_A Oxidoreductase, GFO/IDH 97.7 9.6E-05 3.3E-09 72.1 9.1 85 112-211 10-95 (304)
215 3v5n_A Oxidoreductase; structu 97.7 7.2E-05 2.5E-09 75.9 8.4 87 112-208 38-137 (417)
216 1p77_A Shikimate 5-dehydrogena 97.7 1.9E-05 6.6E-10 75.8 3.5 76 107-192 116-194 (272)
217 3m2t_A Probable dehydrogenase; 97.6 4.7E-05 1.6E-09 75.5 6.0 80 112-199 6-89 (359)
218 1t2d_A LDH-P, L-lactate dehydr 97.6 0.00023 7.7E-09 70.3 10.8 91 111-211 4-125 (322)
219 1nyt_A Shikimate 5-dehydrogena 97.6 6E-05 2E-09 72.2 6.3 77 107-191 116-193 (271)
220 4gqa_A NAD binding oxidoreduct 97.6 0.00011 3.7E-09 73.9 8.4 84 113-199 28-117 (412)
221 3pwz_A Shikimate dehydrogenase 97.6 4.8E-05 1.6E-09 73.7 5.5 73 107-191 117-194 (272)
222 3o9z_A Lipopolysaccaride biosy 97.6 0.00015 5.3E-09 70.7 9.1 85 111-208 3-99 (312)
223 2yv1_A Succinyl-COA ligase [AD 97.6 3.8E-05 1.3E-09 75.1 4.6 117 112-243 14-133 (294)
224 3oa2_A WBPB; oxidoreductase, s 97.6 0.00016 5.5E-09 70.7 9.0 80 111-200 3-95 (318)
225 1zh8_A Oxidoreductase; TM0312, 97.6 0.00013 4.3E-09 71.9 8.2 80 112-199 19-103 (340)
226 2czc_A Glyceraldehyde-3-phosph 97.6 0.00018 6E-09 71.3 9.3 94 112-213 3-111 (334)
227 1ldn_A L-lactate dehydrogenase 97.6 0.00021 7.1E-09 70.2 9.6 72 112-189 7-85 (316)
228 3i23_A Oxidoreductase, GFO/IDH 97.6 0.00017 5.9E-09 71.0 9.0 84 112-209 3-93 (349)
229 2yv2_A Succinyl-COA synthetase 97.6 9E-05 3.1E-09 72.6 6.8 117 112-243 14-134 (297)
230 3u3x_A Oxidoreductase; structu 97.5 0.00026 8.8E-09 70.4 9.9 85 112-208 27-115 (361)
231 3f4l_A Putative oxidoreductase 97.5 5.9E-05 2E-09 74.2 5.0 86 112-209 3-93 (345)
232 3phh_A Shikimate dehydrogenase 97.5 0.0001 3.6E-09 71.4 6.6 68 109-190 117-184 (269)
233 3e82_A Putative oxidoreductase 97.5 0.00037 1.3E-08 69.2 10.3 84 112-209 8-95 (364)
234 2i6t_A Ubiquitin-conjugating e 97.5 0.00057 1.9E-08 67.1 11.4 90 111-212 14-125 (303)
235 1ur5_A Malate dehydrogenase; o 97.5 0.00065 2.2E-08 66.4 11.5 67 112-187 3-79 (309)
236 3gdo_A Uncharacterized oxidore 97.5 0.00035 1.2E-08 69.2 9.4 83 112-208 6-92 (358)
237 2ixa_A Alpha-N-acetylgalactosa 97.4 0.00047 1.6E-08 70.4 10.4 78 112-198 21-111 (444)
238 3l9w_A Glutathione-regulated p 97.4 0.0006 2E-08 69.6 11.1 94 112-212 5-103 (413)
239 3oqb_A Oxidoreductase; structu 97.4 0.00026 9.1E-09 70.3 8.1 86 112-209 7-111 (383)
240 1oju_A MDH, malate dehydrogena 97.4 0.00076 2.6E-08 65.9 10.8 67 112-187 1-78 (294)
241 3kux_A Putative oxidoreductase 97.4 0.00039 1.3E-08 68.5 8.7 84 112-208 8-94 (352)
242 2nvw_A Galactose/lactose metab 97.4 0.00023 8E-09 73.8 7.4 83 112-199 40-129 (479)
243 3fhl_A Putative oxidoreductase 97.3 0.00029 1E-08 69.7 7.2 76 112-199 6-86 (362)
244 3gvi_A Malate dehydrogenase; N 97.3 0.0012 4E-08 65.5 11.3 72 106-187 3-84 (324)
245 1y6j_A L-lactate dehydrogenase 97.3 0.00073 2.5E-08 66.5 9.5 89 112-211 8-122 (318)
246 4gmf_A Yersiniabactin biosynth 97.3 0.00024 8.3E-09 71.6 6.1 86 112-209 8-98 (372)
247 2vt3_A REX, redox-sensing tran 97.3 0.00013 4.3E-09 68.6 3.7 80 112-200 86-167 (215)
248 3btv_A Galactose/lactose metab 97.3 0.0003 1E-08 71.8 6.9 82 112-198 21-109 (438)
249 3p7m_A Malate dehydrogenase; p 97.3 0.0012 4.3E-08 65.2 10.9 67 112-187 6-82 (321)
250 3ip3_A Oxidoreductase, putativ 97.3 0.00045 1.5E-08 67.6 7.4 79 112-199 3-88 (337)
251 3jyo_A Quinate/shikimate dehyd 97.2 0.00037 1.3E-08 67.7 6.5 77 107-190 124-206 (283)
252 1lc0_A Biliverdin reductase A; 97.2 0.00028 9.7E-09 68.2 5.5 83 112-209 8-94 (294)
253 1edz_A 5,10-methylenetetrahydr 97.2 0.00011 3.8E-09 73.0 2.6 96 107-213 174-276 (320)
254 3fbt_A Chorismate mutase and s 97.2 0.00023 7.8E-09 69.4 4.8 71 107-190 119-190 (282)
255 3abi_A Putative uncharacterize 97.2 0.0006 2.1E-08 67.7 7.8 77 112-197 17-96 (365)
256 1nvm_B Acetaldehyde dehydrogen 97.2 0.0011 3.6E-08 65.4 9.5 94 112-213 5-105 (312)
257 1c1d_A L-phenylalanine dehydro 97.2 0.00064 2.2E-08 68.4 7.9 66 107-185 172-238 (355)
258 3pqe_A L-LDH, L-lactate dehydr 97.2 0.0011 3.6E-08 65.9 9.4 70 112-187 6-82 (326)
259 3ldh_A Lactate dehydrogenase; 97.2 0.0012 4.1E-08 65.8 9.6 69 112-187 22-98 (330)
260 3nep_X Malate dehydrogenase; h 97.2 0.0014 4.7E-08 64.8 10.0 67 112-187 1-78 (314)
261 3ngx_A Bifunctional protein fo 97.2 0.00059 2E-08 66.5 7.2 74 108-212 148-222 (276)
262 2d4a_B Malate dehydrogenase; a 97.2 0.0013 4.5E-08 64.4 9.6 89 113-211 1-115 (308)
263 3d0o_A L-LDH 1, L-lactate dehy 97.2 0.0019 6.6E-08 63.4 10.8 70 112-187 7-83 (317)
264 1npy_A Hypothetical shikimate 97.1 0.00067 2.3E-08 65.5 7.0 70 109-191 118-188 (271)
265 3fef_A Putative glucosidase LP 97.1 0.00077 2.6E-08 69.8 7.8 72 112-191 6-88 (450)
266 3l07_A Bifunctional protein fo 97.1 0.00056 1.9E-08 67.0 6.3 76 106-212 157-233 (285)
267 1b7g_O Protein (glyceraldehyde 97.1 0.0027 9.3E-08 63.2 11.2 95 111-213 1-109 (340)
268 1ez4_A Lactate dehydrogenase; 97.1 0.0018 6.2E-08 63.8 9.6 68 112-189 6-83 (318)
269 1pjc_A Protein (L-alanine dehy 97.1 0.00047 1.6E-08 68.8 5.5 98 107-212 164-267 (361)
270 3keo_A Redox-sensing transcrip 97.0 0.00046 1.6E-08 64.8 4.8 109 112-237 85-197 (212)
271 4a26_A Putative C-1-tetrahydro 97.0 0.00069 2.4E-08 66.8 6.3 76 106-212 161-239 (300)
272 2zqz_A L-LDH, L-lactate dehydr 97.0 0.0021 7.3E-08 63.5 9.8 68 112-189 10-87 (326)
273 4f3y_A DHPR, dihydrodipicolina 97.0 0.00066 2.2E-08 65.8 5.9 161 111-286 7-185 (272)
274 3p2o_A Bifunctional protein fo 97.0 0.0012 4.2E-08 64.5 7.7 76 106-212 156-232 (285)
275 3tl2_A Malate dehydrogenase; c 97.0 0.0022 7.5E-08 63.3 9.2 66 112-186 9-86 (315)
276 4ew6_A D-galactose-1-dehydroge 97.0 0.0012 4E-08 64.8 7.2 80 112-209 26-109 (330)
277 1ff9_A Saccharopine reductase; 96.9 0.0017 6E-08 66.8 8.3 78 112-195 4-85 (450)
278 1cf2_P Protein (glyceraldehyde 96.9 0.0033 1.1E-07 62.4 10.0 96 111-214 1-111 (337)
279 2xxj_A L-LDH, L-lactate dehydr 96.9 0.002 6.9E-08 63.1 8.3 67 112-188 1-77 (310)
280 2axq_A Saccharopine dehydrogen 96.9 0.0018 6E-08 67.3 8.2 85 106-196 19-106 (467)
281 3vku_A L-LDH, L-lactate dehydr 96.9 0.0036 1.2E-07 62.2 10.0 66 112-187 10-85 (326)
282 4ina_A Saccharopine dehydrogen 96.9 0.0012 4.1E-08 66.9 6.5 81 111-197 1-95 (405)
283 4a5o_A Bifunctional protein fo 96.9 0.0017 5.9E-08 63.5 7.3 76 106-212 157-233 (286)
284 3tnl_A Shikimate dehydrogenase 96.8 0.002 6.8E-08 63.7 7.6 78 107-191 151-239 (315)
285 3t4e_A Quinate/shikimate dehyd 96.8 0.0016 5.6E-08 64.2 6.9 77 107-190 145-232 (312)
286 3ijp_A DHPR, dihydrodipicolina 96.8 0.0013 4.5E-08 64.4 5.9 161 111-286 21-200 (288)
287 1a4i_A Methylenetetrahydrofola 96.8 0.0027 9.4E-08 62.5 8.1 76 106-212 161-237 (301)
288 4aj2_A L-lactate dehydrogenase 96.8 0.0045 1.5E-07 61.5 9.5 71 108-186 17-95 (331)
289 1b0a_A Protein (fold bifunctio 96.8 0.0021 7.3E-08 62.9 7.0 76 106-212 155-231 (288)
290 1nvt_A Shikimate 5'-dehydrogen 96.7 0.0013 4.3E-08 63.4 4.9 74 107-191 125-206 (287)
291 2yyy_A Glyceraldehyde-3-phosph 96.7 0.0083 2.8E-07 59.9 11.0 92 112-214 3-115 (343)
292 1jw9_B Molybdopterin biosynthe 96.7 0.0047 1.6E-07 58.5 8.5 87 105-198 26-141 (249)
293 3do5_A HOM, homoserine dehydro 96.7 0.0039 1.3E-07 61.8 8.2 98 110-211 1-114 (327)
294 3upl_A Oxidoreductase; rossman 96.6 0.0044 1.5E-07 64.1 8.8 86 112-209 24-136 (446)
295 1mld_A Malate dehydrogenase; o 96.6 0.0084 2.9E-07 58.8 10.4 68 112-187 1-77 (314)
296 2dt5_A AT-rich DNA-binding pro 96.5 0.00079 2.7E-08 62.9 2.0 81 112-200 81-162 (211)
297 4g65_A TRK system potassium up 96.4 0.0055 1.9E-07 63.3 7.9 75 112-192 4-82 (461)
298 3e8x_A Putative NAD-dependent 96.4 0.028 9.7E-07 51.1 11.8 76 105-188 16-94 (236)
299 3tum_A Shikimate dehydrogenase 96.4 0.0028 9.7E-08 61.2 5.1 97 107-210 122-223 (269)
300 1obb_A Maltase, alpha-glucosid 96.4 0.014 4.9E-07 60.8 10.6 75 112-188 4-87 (480)
301 2c2x_A Methylenetetrahydrofola 96.4 0.0066 2.2E-07 59.3 7.6 78 106-212 154-232 (281)
302 3ius_A Uncharacterized conserv 96.4 0.021 7.3E-07 53.1 10.8 70 111-189 5-74 (286)
303 3ff4_A Uncharacterized protein 96.3 0.006 2.1E-07 52.2 6.4 86 111-215 4-93 (122)
304 1vl6_A Malate oxidoreductase; 96.3 0.011 3.7E-07 60.2 9.2 90 107-209 189-291 (388)
305 1dih_A Dihydrodipicolinate red 96.3 0.0016 5.6E-08 62.8 3.0 160 112-286 6-184 (273)
306 3dfz_A SIRC, precorrin-2 dehyd 96.3 0.016 5.5E-07 54.6 9.6 88 101-198 23-111 (223)
307 3fi9_A Malate dehydrogenase; s 96.3 0.014 4.8E-07 58.3 9.6 74 106-186 4-84 (343)
308 2csu_A 457AA long hypothetical 96.2 0.0031 1.1E-07 65.1 4.7 87 112-215 9-100 (457)
309 1j5p_A Aspartate dehydrogenase 96.2 0.005 1.7E-07 59.3 5.7 80 112-213 13-93 (253)
310 1ys4_A Aspartate-semialdehyde 96.2 0.012 4.2E-07 58.4 8.7 95 112-214 9-116 (354)
311 1lnq_A MTHK channels, potassiu 96.1 0.017 6E-07 56.1 9.3 92 112-212 116-212 (336)
312 3eag_A UDP-N-acetylmuramate:L- 96.0 0.021 7.2E-07 55.8 9.3 70 111-188 4-78 (326)
313 2ozp_A N-acetyl-gamma-glutamyl 96.0 0.014 4.7E-07 58.1 7.9 94 111-213 4-100 (345)
314 3ing_A Homoserine dehydrogenas 95.9 0.019 6.7E-07 56.8 8.5 97 112-211 5-116 (325)
315 1smk_A Malate dehydrogenase, g 95.9 0.04 1.4E-06 54.2 10.5 67 112-187 9-85 (326)
316 1xyg_A Putative N-acetyl-gamma 95.8 0.017 6E-07 57.7 7.7 92 112-213 17-113 (359)
317 2x0j_A Malate dehydrogenase; o 95.8 0.015 5E-07 57.0 7.0 68 112-186 1-77 (294)
318 3dr3_A N-acetyl-gamma-glutamyl 95.8 0.018 6E-07 57.4 7.7 93 111-213 4-107 (337)
319 1s6y_A 6-phospho-beta-glucosid 95.8 0.038 1.3E-06 57.1 10.2 74 112-189 8-94 (450)
320 1u8x_X Maltose-6'-phosphate gl 95.7 0.04 1.4E-06 57.3 10.3 75 112-190 29-114 (472)
321 1p9l_A Dihydrodipicolinate red 95.7 0.032 1.1E-06 53.1 8.8 144 112-285 1-156 (245)
322 1dxh_A Ornithine carbamoyltran 95.7 0.057 2E-06 53.8 11.0 70 107-187 152-233 (335)
323 1duv_G Octase-1, ornithine tra 95.7 0.053 1.8E-06 54.1 10.7 70 107-187 152-233 (333)
324 2dvm_A Malic enzyme, 439AA lon 95.7 0.022 7.6E-07 58.8 8.2 93 106-211 182-295 (439)
325 1pvv_A Otcase, ornithine carba 95.7 0.073 2.5E-06 52.6 11.6 69 107-186 152-231 (315)
326 3r6d_A NAD-dependent epimerase 95.7 0.04 1.4E-06 49.5 8.9 73 111-189 5-84 (221)
327 1u8f_O GAPDH, glyceraldehyde-3 95.6 0.051 1.7E-06 53.9 10.3 92 112-212 4-123 (335)
328 3mtj_A Homoserine dehydrogenas 95.6 0.036 1.2E-06 57.3 9.4 90 113-210 12-108 (444)
329 1vlv_A Otcase, ornithine carba 95.6 0.058 2E-06 53.6 10.5 70 107-187 164-245 (325)
330 3lk7_A UDP-N-acetylmuramoylala 95.6 0.021 7.2E-07 58.3 7.6 74 106-188 5-84 (451)
331 2ep5_A 350AA long hypothetical 95.4 0.034 1.2E-06 55.3 8.0 93 112-213 5-109 (350)
332 1p3d_A UDP-N-acetylmuramate--a 95.4 0.037 1.3E-06 56.8 8.5 69 108-185 15-84 (475)
333 1zud_1 Adenylyltransferase THI 95.4 0.041 1.4E-06 52.1 8.2 87 105-198 23-138 (251)
334 3ew7_A LMO0794 protein; Q8Y8U8 95.3 0.088 3E-06 46.6 9.7 69 112-188 1-71 (221)
335 1o6z_A MDH, malate dehydrogena 95.3 0.053 1.8E-06 52.7 8.9 66 112-187 1-79 (303)
336 1lu9_A Methylene tetrahydromet 95.2 0.025 8.5E-07 54.0 6.2 74 108-188 117-198 (287)
337 3qvo_A NMRA family protein; st 95.2 0.03 1E-06 51.2 6.5 74 111-191 23-101 (236)
338 2w37_A Ornithine carbamoyltran 95.2 0.082 2.8E-06 53.2 10.1 70 107-187 173-254 (359)
339 1ebf_A Homoserine dehydrogenas 95.1 0.014 4.8E-07 58.5 4.3 22 112-133 5-26 (358)
340 4ep1_A Otcase, ornithine carba 95.1 0.14 4.7E-06 51.2 11.3 69 107-186 176-255 (340)
341 4hv4_A UDP-N-acetylmuramate--L 95.0 0.051 1.8E-06 56.3 8.4 69 111-188 22-93 (494)
342 1b8p_A Protein (malate dehydro 95.0 0.065 2.2E-06 52.6 8.7 70 112-187 6-92 (329)
343 3gd5_A Otcase, ornithine carba 94.9 0.13 4.6E-06 50.9 10.7 69 107-186 154-233 (323)
344 4amu_A Ornithine carbamoyltran 94.9 0.17 5.8E-06 51.0 11.4 69 108-185 178-258 (365)
345 1qyc_A Phenylcoumaran benzylic 94.9 0.068 2.3E-06 50.1 8.1 82 111-198 4-100 (308)
346 4b4u_A Bifunctional protein fo 94.8 0.057 1.9E-06 53.2 7.6 76 106-212 175-251 (303)
347 2nqt_A N-acetyl-gamma-glutamyl 94.8 0.033 1.1E-06 55.8 6.0 90 111-214 9-112 (352)
348 2gas_A Isoflavone reductase; N 94.7 0.11 3.8E-06 48.7 9.1 82 111-198 2-99 (307)
349 3dqp_A Oxidoreductase YLBE; al 94.7 0.11 3.8E-06 46.5 8.7 69 112-189 1-74 (219)
350 3tpf_A Otcase, ornithine carba 94.7 0.13 4.3E-06 50.7 9.6 71 107-186 142-222 (307)
351 1hdo_A Biliverdin IX beta redu 94.6 0.13 4.3E-06 44.9 8.8 70 112-188 4-77 (206)
352 3h2s_A Putative NADH-flavin re 94.6 0.2 6.8E-06 44.6 10.1 70 112-188 1-72 (224)
353 2r6j_A Eugenol synthase 1; phe 94.6 0.1 3.5E-06 49.4 8.6 81 112-198 12-102 (318)
354 1oth_A Protein (ornithine tran 94.6 0.098 3.4E-06 51.8 8.6 69 107-186 152-231 (321)
355 2ef0_A Ornithine carbamoyltran 94.5 0.2 6.7E-06 49.3 10.6 70 107-187 151-222 (301)
356 2i6u_A Otcase, ornithine carba 94.5 0.096 3.3E-06 51.6 8.3 69 107-186 145-225 (307)
357 3e5r_O PP38, glyceraldehyde-3- 94.5 0.13 4.3E-06 51.2 9.3 94 112-213 4-127 (337)
358 3c8m_A Homoserine dehydrogenas 94.4 0.074 2.5E-06 52.5 7.4 93 112-210 7-119 (331)
359 7mdh_A Protein (malate dehydro 94.4 0.25 8.5E-06 49.9 11.3 69 112-186 33-116 (375)
360 3two_A Mannitol dehydrogenase; 94.4 0.087 3E-06 51.3 7.7 89 109-211 176-264 (348)
361 1y1p_A ARII, aldehyde reductas 94.4 0.22 7.5E-06 47.0 10.4 75 106-187 7-92 (342)
362 2ejw_A HDH, homoserine dehydro 94.4 0.058 2E-06 53.5 6.5 88 112-210 4-96 (332)
363 2d8a_A PH0655, probable L-thre 94.3 0.1 3.4E-06 50.8 8.0 93 109-212 167-267 (348)
364 3hhp_A Malate dehydrogenase; M 94.3 0.13 4.6E-06 50.4 8.8 71 112-187 1-78 (312)
365 2cdc_A Glucose dehydrogenase g 94.2 0.094 3.2E-06 51.5 7.6 93 107-211 178-277 (366)
366 4f2g_A Otcase 1, ornithine car 94.2 0.068 2.3E-06 52.7 6.5 68 107-186 151-224 (309)
367 1vkn_A N-acetyl-gamma-glutamyl 94.2 0.066 2.3E-06 53.6 6.5 90 111-213 13-108 (351)
368 3c1o_A Eugenol synthase; pheny 94.1 0.16 5.4E-06 48.0 8.9 82 111-198 4-100 (321)
369 4h7p_A Malate dehydrogenase; s 94.1 0.22 7.6E-06 49.6 10.2 80 105-186 19-108 (345)
370 4gx0_A TRKA domain protein; me 94.1 0.084 2.9E-06 55.0 7.4 89 112-209 349-440 (565)
371 3ip1_A Alcohol dehydrogenase, 93.9 0.37 1.3E-05 48.0 11.5 96 109-212 213-318 (404)
372 1p0f_A NADP-dependent alcohol 93.9 0.31 1.1E-05 47.8 10.7 92 109-211 191-292 (373)
373 3i6i_A Putative leucoanthocyan 93.9 0.13 4.5E-06 49.5 7.8 82 112-199 11-107 (346)
374 3dhn_A NAD-dependent epimerase 93.9 0.067 2.3E-06 47.9 5.4 71 111-189 4-78 (227)
375 3h8v_A Ubiquitin-like modifier 93.8 0.17 5.7E-06 49.5 8.5 44 98-148 24-68 (292)
376 1qyd_A Pinoresinol-lariciresin 93.8 0.17 5.9E-06 47.4 8.3 73 111-189 4-87 (313)
377 3gg2_A Sugar dehydrogenase, UD 93.8 0.22 7.4E-06 51.2 9.6 94 107-214 315-421 (450)
378 2f00_A UDP-N-acetylmuramate--L 93.7 0.15 5E-06 52.6 8.4 68 109-185 17-85 (491)
379 2dph_A Formaldehyde dismutase; 93.7 0.1 3.5E-06 51.9 6.9 95 109-211 185-298 (398)
380 1ml4_A Aspartate transcarbamoy 93.7 0.11 3.7E-06 51.2 7.0 72 107-187 152-230 (308)
381 4a2c_A Galactitol-1-phosphate 93.7 0.37 1.3E-05 46.4 10.7 95 108-212 159-260 (346)
382 2wm3_A NMRA-like family domain 93.7 0.26 9.1E-06 46.1 9.4 70 112-187 6-81 (299)
383 4ej6_A Putative zinc-binding d 93.6 0.2 6.8E-06 49.4 8.7 93 109-212 182-284 (370)
384 1e3i_A Alcohol dehydrogenase, 93.5 0.4 1.4E-05 47.1 10.7 91 109-210 195-295 (376)
385 3s2e_A Zinc-containing alcohol 93.5 0.22 7.7E-06 48.1 8.8 92 109-211 166-262 (340)
386 1pqw_A Polyketide synthase; ro 93.4 0.21 7.1E-06 44.2 7.7 93 109-213 38-138 (198)
387 2jhf_A Alcohol dehydrogenase E 93.4 0.41 1.4E-05 47.0 10.5 92 109-211 191-292 (374)
388 3fpf_A Mtnas, putative unchara 93.4 0.37 1.3E-05 47.2 10.1 91 108-209 121-219 (298)
389 3r7f_A Aspartate carbamoyltran 93.3 0.13 4.5E-06 50.6 6.8 65 107-186 144-211 (304)
390 2o7s_A DHQ-SDH PR, bifunctiona 93.3 0.1 3.5E-06 54.4 6.4 48 107-161 361-408 (523)
391 1cdo_A Alcohol dehydrogenase; 93.3 0.46 1.6E-05 46.6 10.8 91 109-210 192-292 (374)
392 4dpk_A Malonyl-COA/succinyl-CO 93.3 0.24 8.3E-06 49.5 8.8 89 112-214 8-112 (359)
393 4dpl_A Malonyl-COA/succinyl-CO 93.3 0.24 8.3E-06 49.5 8.8 89 112-214 8-112 (359)
394 3ruf_A WBGU; rossmann fold, UD 93.3 0.27 9.2E-06 47.0 8.9 76 106-188 21-110 (351)
395 3gaz_A Alcohol dehydrogenase s 93.3 0.24 8.1E-06 48.2 8.6 91 109-213 150-247 (343)
396 4g65_A TRK system potassium up 93.3 0.51 1.7E-05 48.5 11.4 95 112-213 236-335 (461)
397 3grf_A Ornithine carbamoyltran 93.2 0.22 7.4E-06 49.5 8.2 68 107-185 158-241 (328)
398 3hn7_A UDP-N-acetylmuramate-L- 93.2 0.25 8.6E-06 51.5 9.1 76 105-189 14-93 (524)
399 1pjq_A CYSG, siroheme synthase 93.1 0.36 1.2E-05 49.6 10.0 87 101-197 4-92 (457)
400 1rjw_A ADH-HT, alcohol dehydro 93.1 0.24 8.2E-06 48.1 8.3 92 109-211 164-260 (339)
401 2fzw_A Alcohol dehydrogenase c 93.1 0.44 1.5E-05 46.6 10.3 92 109-211 190-291 (373)
402 3slg_A PBGP3 protein; structur 93.1 0.1 3.5E-06 50.4 5.7 81 101-187 15-100 (372)
403 3uko_A Alcohol dehydrogenase c 93.1 0.34 1.2E-05 47.7 9.5 92 109-211 193-294 (378)
404 1pl8_A Human sorbitol dehydrog 93.1 0.44 1.5E-05 46.4 10.3 92 109-211 171-272 (356)
405 3d6n_B Aspartate carbamoyltran 93.1 0.086 2.9E-06 51.6 5.0 70 107-189 143-215 (291)
406 3uog_A Alcohol dehydrogenase; 93.0 0.13 4.4E-06 50.5 6.2 91 109-211 189-286 (363)
407 2h1q_A Hypothetical protein; Z 93.0 0.16 5.6E-06 49.1 6.8 83 99-205 130-212 (270)
408 1t4b_A Aspartate-semialdehyde 92.9 0.13 4.4E-06 51.7 6.2 91 111-213 1-99 (367)
409 1e3j_A NADP(H)-dependent ketos 92.9 0.65 2.2E-05 45.1 11.2 92 109-211 168-270 (352)
410 4a8t_A Putrescine carbamoyltra 92.9 0.29 1E-05 48.8 8.7 70 107-186 172-250 (339)
411 1f8f_A Benzyl alcohol dehydrog 92.9 0.21 7.3E-06 48.9 7.7 92 109-211 190-288 (371)
412 1kol_A Formaldehyde dehydrogen 92.9 0.23 7.8E-06 49.2 7.9 95 109-211 185-299 (398)
413 4gx0_A TRKA domain protein; me 92.8 0.49 1.7E-05 49.2 10.7 72 112-191 128-204 (565)
414 2ph5_A Homospermidine synthase 92.8 0.19 6.4E-06 52.4 7.3 92 112-212 14-114 (480)
415 4a7p_A UDP-glucose dehydrogena 92.7 0.25 8.4E-06 50.9 8.1 93 107-214 319-424 (446)
416 1yqd_A Sinapyl alcohol dehydro 92.7 0.16 5.4E-06 50.0 6.4 88 109-210 187-280 (366)
417 3sds_A Ornithine carbamoyltran 92.7 0.3 1E-05 49.0 8.5 68 108-186 186-266 (353)
418 1uuf_A YAHK, zinc-type alcohol 92.7 0.15 5.3E-06 50.3 6.3 90 109-211 194-287 (369)
419 1iz0_A Quinone oxidoreductase; 92.7 0.13 4.6E-06 48.8 5.7 90 109-211 125-217 (302)
420 1kyq_A Met8P, siroheme biosynt 92.6 0.2 6.8E-06 48.5 6.9 37 106-149 9-45 (274)
421 2yfk_A Aspartate/ornithine car 92.6 0.31 1.1E-05 50.0 8.5 68 108-186 186-271 (418)
422 3cps_A Glyceraldehyde 3-phosph 92.6 0.28 9.6E-06 49.2 8.0 95 110-213 16-139 (354)
423 3gpi_A NAD-dependent epimerase 92.5 0.14 4.9E-06 47.6 5.5 65 112-187 4-72 (286)
424 1sb8_A WBPP; epimerase, 4-epim 92.5 0.44 1.5E-05 45.7 9.1 75 107-188 24-112 (352)
425 4a0s_A Octenoyl-COA reductase/ 92.4 0.44 1.5E-05 48.0 9.4 88 109-212 220-336 (447)
426 3q2o_A Phosphoribosylaminoimid 92.4 0.12 4.3E-06 51.0 5.3 68 107-185 11-82 (389)
427 1piw_A Hypothetical zinc-type 92.4 0.13 4.3E-06 50.5 5.2 92 109-211 179-275 (360)
428 2r00_A Aspartate-semialdehyde 92.4 0.12 4.1E-06 51.1 5.1 92 111-214 3-98 (336)
429 2q3e_A UDP-glucose 6-dehydroge 92.4 0.47 1.6E-05 48.6 9.7 96 107-214 326-445 (467)
430 4b7c_A Probable oxidoreductase 92.4 0.23 7.7E-06 47.9 6.9 93 109-213 149-249 (336)
431 2hcy_A Alcohol dehydrogenase 1 92.3 0.41 1.4E-05 46.5 8.7 92 109-211 169-268 (347)
432 3jyn_A Quinone oxidoreductase; 92.3 0.3 1E-05 47.0 7.6 92 109-212 140-239 (325)
433 4fs3_A Enoyl-[acyl-carrier-pro 92.3 0.28 9.6E-06 45.8 7.3 90 107-214 3-96 (256)
434 2c0c_A Zinc binding alcohol de 92.1 0.39 1.3E-05 47.1 8.4 93 109-213 163-262 (362)
435 3qwb_A Probable quinone oxidor 92.1 0.23 7.9E-06 47.9 6.6 92 109-212 148-247 (334)
436 3hsk_A Aspartate-semialdehyde 92.1 0.34 1.2E-05 49.0 8.0 89 112-214 20-126 (381)
437 3fbg_A Putative arginate lyase 92.0 0.38 1.3E-05 46.7 8.2 94 109-213 150-249 (346)
438 3g79_A NDP-N-acetyl-D-galactos 92.0 0.34 1.2E-05 50.3 8.1 91 107-214 350-452 (478)
439 1gtm_A Glutamate dehydrogenase 91.9 0.15 5E-06 52.3 5.2 37 106-149 207-245 (419)
440 3tqh_A Quinone oxidoreductase; 91.9 0.32 1.1E-05 46.7 7.4 92 108-212 151-245 (321)
441 4ffl_A PYLC; amino acid, biosy 91.9 0.16 5.4E-06 49.6 5.2 33 111-149 1-33 (363)
442 3q98_A Transcarbamylase; rossm 91.9 0.42 1.4E-05 48.7 8.4 71 107-186 188-274 (399)
443 2bka_A CC3, TAT-interacting pr 91.8 0.34 1.2E-05 43.6 7.1 74 108-189 16-95 (242)
444 1v3u_A Leukotriene B4 12- hydr 91.8 0.41 1.4E-05 46.0 8.0 92 109-212 145-244 (333)
445 4id9_A Short-chain dehydrogena 91.8 0.32 1.1E-05 46.3 7.2 69 105-187 14-86 (347)
446 2o3j_A UDP-glucose 6-dehydroge 91.7 0.82 2.8E-05 47.1 10.6 97 107-214 332-449 (481)
447 2fk8_A Methoxy mycolic acid sy 91.7 1.1 3.7E-05 42.5 10.7 90 109-210 90-192 (318)
448 4eye_A Probable oxidoreductase 91.7 0.27 9.1E-06 47.9 6.5 90 109-211 159-256 (342)
449 3e05_A Precorrin-6Y C5,15-meth 91.6 1.2 4.1E-05 39.2 10.3 92 109-211 40-141 (204)
450 2q1s_A Putative nucleotide sug 91.6 0.25 8.4E-06 48.2 6.3 76 106-188 28-109 (377)
451 3fpc_A NADP-dependent alcohol 91.6 0.22 7.5E-06 48.5 5.9 92 109-211 166-265 (352)
452 3csu_A Protein (aspartate carb 91.6 0.51 1.8E-05 46.5 8.5 72 107-186 151-229 (310)
453 3rui_A Ubiquitin-like modifier 91.5 0.74 2.5E-05 45.9 9.6 37 105-148 29-66 (340)
454 3aog_A Glutamate dehydrogenase 91.5 0.43 1.5E-05 49.2 8.1 36 106-148 231-267 (440)
455 3i1j_A Oxidoreductase, short c 91.4 1.1 3.9E-05 40.5 10.2 47 99-152 3-50 (247)
456 2pzm_A Putative nucleotide sug 91.4 0.2 6.8E-06 47.9 5.2 76 105-187 15-97 (330)
457 1y7t_A Malate dehydrogenase; N 91.4 0.25 8.5E-06 48.0 5.9 68 112-186 5-88 (327)
458 3gms_A Putative NADPH:quinone 91.3 0.39 1.3E-05 46.5 7.3 92 109-212 144-243 (340)
459 3m2p_A UDP-N-acetylglucosamine 91.3 0.27 9.2E-06 46.3 6.0 66 112-187 3-71 (311)
460 4dup_A Quinone oxidoreductase; 91.3 0.36 1.2E-05 47.1 7.1 92 109-212 167-265 (353)
461 1xgk_A Nitrogen metabolite rep 91.2 1 3.5E-05 43.9 10.3 71 112-188 6-83 (352)
462 3l5o_A Uncharacterized protein 91.2 0.36 1.2E-05 46.7 6.8 84 98-205 129-212 (270)
463 2b5w_A Glucose dehydrogenase; 91.0 0.52 1.8E-05 45.9 7.9 93 108-211 171-272 (357)
464 2hjs_A USG-1 protein homolog; 90.9 0.16 5.5E-06 50.3 4.2 90 112-213 7-100 (340)
465 3gqv_A Enoyl reductase; medium 90.9 1.7 5.7E-05 42.7 11.5 94 108-213 163-264 (371)
466 1y8q_A Ubiquitin-like 1 activa 90.9 1.1 3.9E-05 44.2 10.3 88 105-199 31-146 (346)
467 1yb1_A 17-beta-hydroxysteroid 90.8 1.2 4.1E-05 41.4 9.9 45 99-150 20-65 (272)
468 1orr_A CDP-tyvelose-2-epimeras 90.8 1.8 6E-05 40.9 11.2 72 111-188 1-83 (347)
469 3goh_A Alcohol dehydrogenase, 90.7 0.31 1E-05 46.6 5.8 88 109-212 142-229 (315)
470 3o38_A Short chain dehydrogena 90.7 0.54 1.9E-05 43.4 7.3 89 106-214 18-111 (266)
471 3h5n_A MCCB protein; ubiquitin 90.6 0.97 3.3E-05 44.8 9.6 37 105-148 113-150 (353)
472 3orq_A N5-carboxyaminoimidazol 90.6 0.19 6.4E-06 49.8 4.3 35 108-149 10-44 (377)
473 4a8p_A Putrescine carbamoyltra 90.6 0.56 1.9E-05 47.1 7.7 70 107-186 150-228 (355)
474 3vh1_A Ubiquitin-like modifier 90.5 0.55 1.9E-05 50.2 8.1 36 105-147 322-358 (598)
475 3rwb_A TPLDH, pyridoxal 4-dehy 90.5 0.63 2.1E-05 42.9 7.6 88 106-214 2-90 (247)
476 1r0k_A 1-deoxy-D-xylulose 5-ph 90.5 0.51 1.7E-05 47.9 7.4 95 110-211 3-123 (388)
477 3nkl_A UDP-D-quinovosamine 4-d 90.5 0.46 1.6E-05 39.7 6.1 92 112-214 5-101 (141)
478 2x5o_A UDP-N-acetylmuramoylala 90.4 0.15 5.2E-06 51.7 3.5 68 108-185 3-71 (439)
479 3pwk_A Aspartate-semialdehyde 90.4 0.16 5.4E-06 51.1 3.6 88 112-214 3-97 (366)
480 1qor_A Quinone oxidoreductase; 90.3 0.47 1.6E-05 45.5 6.7 91 109-211 140-238 (327)
481 1pg5_A Aspartate carbamoyltran 90.3 0.67 2.3E-05 45.4 7.8 73 107-187 146-222 (299)
482 2qrj_A Saccharopine dehydrogen 90.2 0.11 3.8E-06 52.9 2.3 79 112-212 215-300 (394)
483 2y0c_A BCEC, UDP-glucose dehyd 90.2 1.5 5E-05 45.3 10.7 94 107-214 325-441 (478)
484 3e48_A Putative nucleoside-dip 90.2 0.99 3.4E-05 41.8 8.7 71 112-188 1-75 (289)
485 1vj0_A Alcohol dehydrogenase, 90.1 0.57 2E-05 46.2 7.4 92 109-211 195-297 (380)
486 3u95_A Glycoside hydrolase, fa 90.1 0.58 2E-05 48.5 7.7 73 112-186 1-84 (477)
487 4gsl_A Ubiquitin-like modifier 90.1 1.1 3.8E-05 48.0 10.0 38 104-148 320-358 (615)
488 4dvj_A Putative zinc-dependent 90.1 1.3 4.6E-05 43.3 10.0 91 109-211 171-269 (363)
489 3oh8_A Nucleoside-diphosphate 90.0 1.5 5.2E-05 45.0 10.7 63 112-188 148-211 (516)
490 2cf5_A Atccad5, CAD, cinnamyl 90.0 0.4 1.4E-05 46.9 6.0 89 109-211 180-274 (357)
491 1kpg_A CFA synthase;, cyclopro 89.9 2.1 7.1E-05 39.7 10.7 89 109-210 64-166 (287)
492 2a9f_A Putative malic enzyme ( 89.9 0.52 1.8E-05 48.0 6.9 92 107-211 185-288 (398)
493 2tmg_A Protein (glutamate dehy 89.9 0.68 2.3E-05 47.4 7.8 36 106-148 205-242 (415)
494 1wly_A CAAR, 2-haloacrylate re 89.8 0.61 2.1E-05 44.9 7.1 91 109-211 145-243 (333)
495 3nrc_A Enoyl-[acyl-carrier-pro 89.7 0.92 3.1E-05 42.5 8.1 90 105-215 21-114 (280)
496 2j3h_A NADP-dependent oxidored 89.7 0.49 1.7E-05 45.6 6.4 92 109-212 155-255 (345)
497 3b1j_A Glyceraldehyde 3-phosph 89.5 1.5 5.3E-05 43.4 9.9 83 112-198 3-111 (339)
498 3jv7_A ADH-A; dehydrogenase, n 89.4 0.93 3.2E-05 43.8 8.1 93 108-211 170-269 (345)
499 1zsy_A Mitochondrial 2-enoyl t 89.4 1.5 5.2E-05 42.6 9.7 90 109-213 167-271 (357)
500 2vdc_G Glutamate synthase [NAD 89.4 1.2 4.1E-05 45.4 9.3 83 98-187 110-216 (456)
No 1
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=100.00 E-value=5.3e-81 Score=648.36 Aligned_cols=346 Identities=85% Similarity=1.295 Sum_probs=324.1
Q ss_pred CccccccccccchHhhhhhcccchhhhcccccccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEe
Q 014834 68 TPFLLDFETSVFKKDAISLANRDEFIVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGL 147 (417)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~e~~vr~g~~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~ 147 (417)
.+..++|||++|.+++++|+|++|++|++|+|+|++++++|+|+|||||||+|+||.+||++|+++++++++|++|++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~g~~E~v~~~~~w~~~~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~ 90 (525)
T 3fr7_A 11 AMPSLDFDTSVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGL 90 (525)
T ss_dssp ----CCCCCSSSCEEEEEETTEEEEEEECCGGGGGGHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred cccccccccccceeeEeecCCcceEEEeccccccccChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEe
Confidence 45679999999999999999999999999999999999999999999999999999999999999988899999999999
Q ss_pred cCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCC
Q 014834 148 RKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFP 227 (417)
Q Consensus 148 r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~ 227 (417)
+.++++++.|++.|+...++++.+++|++++||+|||++||..+.+++++|.++|++|++|+++|||+++++++..+.+|
T Consensus 91 r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaVP~~~~~eVl~eI~p~LK~GaILs~AaGf~I~~le~~~i~~p 170 (525)
T 3fr7_A 91 RKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFP 170 (525)
T ss_dssp CTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEESSSHHHHHHHHTTCCCC
T ss_pred CCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECCChHHHHHHHHHHHHhcCCCCeEEEeCCCCHHHHhhhcccCC
Confidence 98888899999999984233346899999999999999999999999999999999999999999999998876567899
Q ss_pred CCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccch
Q 014834 228 KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERG 307 (417)
Q Consensus 228 ~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t 307 (417)
++++|||+|||+|+++||++|.+|+++||+|+++++++++|+++++++++++|+.++|+.++++|+|++|+++|+||+|+
T Consensus 171 ~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqt 250 (525)
T 3fr7_A 171 KNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERG 250 (525)
T ss_dssp TTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHT
T ss_pred CCCcEEEEecCCCchhHHHHHhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhcccCchhhhhhhhhhccChhHHHHHHH
Q 014834 308 ILLGAVHGIVESLFRRFTENGMSEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYE 387 (417)
Q Consensus 308 ~L~G~~pA~iea~~d~~v~~Gl~~e~A~~~~~q~~~~g~~~li~e~G~~~l~~~vss~~~~~~~~~~~~~~~~~~~~m~~ 387 (417)
+|||++|+++++++|++|++||||++||++++|+++|+|++||+|+|+.+|+++||+|++++||++|...+.|+|++|+|
T Consensus 251 vLsG~~pAlieA~~d~lVe~G~~pe~Ay~~~~qel~~~i~~li~e~G~~~m~~~~S~ta~~~~~~~~~~~~~~~~~~m~~ 330 (525)
T 3fr7_A 251 ILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYE 330 (525)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTHHHHHHHHHCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCcHHHHHHHHHhccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999887799999988778899999999
Q ss_pred HHHhhccChHHHHHHHcCCcc-ccccc
Q 014834 388 CYEDVAAGSEIRSVVLAGRRF-YVSSY 413 (417)
Q Consensus 388 ~~~~v~~g~~~~~~~~~~~~~-~~~~~ 413 (417)
||++||+|+|+|+||++|+|+ ||..+
T Consensus 331 ~~~~i~~G~~~~~~~~~~~~~~~~~~~ 357 (525)
T 3fr7_A 331 CYEDVASGSEIRSVVLAGRRFYEKEGL 357 (525)
T ss_dssp HHHHHHHSHHHHHHHHHHHTTSCBTTB
T ss_pred HHHHHhCCHHHHHHHHhcCccchhccc
Confidence 999999999999999998754 55443
No 2
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=100.00 E-value=2.5e-73 Score=582.43 Aligned_cols=314 Identities=26% Similarity=0.379 Sum_probs=295.0
Q ss_pred ccccccccchHhhhh-----hcccchhhhcccccccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE
Q 014834 71 LLDFETSVFKKDAIS-----LANRDEFIVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV 145 (417)
Q Consensus 71 ~~~~~~~~~~~~~~~-----~~~~~e~~vr~g~~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViV 145 (417)
.|||||++||+|+.+ ||+++| |..+++.|+| |||+|||||+||+|+|+||||| |++|+|
T Consensus 2 ~ny~n~l~~~~~~~~~~~c~~m~~~e---------F~~~~~~lkg-K~IaVIGyGsQG~AqAlNLRDS------Gv~V~V 65 (491)
T 3ulk_A 2 ANYFNTLNLRQQLAQLGKCRFMGRDE---------FADGASYLQG-KKVVIVGCGAQGLNQGLNMRDS------GLDISY 65 (491)
T ss_dssp CCTGGGSCHHHHHHHHTCCEECCGGG---------GTTTTGGGTT-SEEEEESCSHHHHHHHHHHHHT------TCEEEE
T ss_pred cchhccccHHHHHHHhccceeccHHH---------hcchhHHHcC-CEEEEeCCChHhHHHHhHHHhc------CCcEEE
Confidence 499999999999987 788888 8999999999 9999999999999999999999 999999
Q ss_pred EecCCh-----hhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEecCchhhhhh
Q 014834 146 GLRKGS-----RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQ 220 (417)
Q Consensus 146 g~r~~s-----~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~ 220 (417)
++|+++ +||++|+++||. +.+++|++++||+|++++||..|.++|++|.|+||+|++|.++|||+|++.
T Consensus 66 glr~~s~~e~~~S~~~A~~~Gf~-----v~~~~eA~~~ADvV~~L~PD~~q~~vy~~I~p~lk~G~~L~faHGFnI~~~- 139 (491)
T 3ulk_A 66 ALRKEAIAEKRASWRKATENGFK-----VGTYEELIPQADLVINLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEV- 139 (491)
T ss_dssp EECHHHHHTTCHHHHHHHHTTCE-----EEEHHHHGGGCSEEEECSCGGGHHHHHHHHGGGSCTTCEEEESSCHHHHTT-
T ss_pred EeCCCCcccccchHHHHHHCCCE-----ecCHHHHHHhCCEEEEeCChhhHHHHHHHHHhhCCCCCEEEecCccccccc-
Confidence 999544 899999999999 468999999999999999999999999999999999999999999999764
Q ss_pred hcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeec--CCCCHHHHHHHHHHHHHhCCCc--eeccchhh
Q 014834 221 SIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH--QDVDGRATNVALGWSVALGSPF--TFATTLEQ 296 (417)
Q Consensus 221 ~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~--~dvsgea~e~a~~L~~alG~~~--~iettf~~ 296 (417)
.+.||+|++||+|+||+||+.||++|++| +|+|++|+|| ||.+|++++++++|+.++|++| +++|||++
T Consensus 140 --~i~pp~dvdVimVAPKgpG~~VR~~y~~G-----~GvP~liAVhqeqD~sG~a~~~AlayA~aiG~~raGvieTTF~e 212 (491)
T 3ulk_A 140 --GEQIRKDITVVMVAPKCPGTEVREEYKRG-----FGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVA 212 (491)
T ss_dssp --CCCCCTTSEEEEEEESSCHHHHHHHHHTT-----CCCCEEEEECGGGCTTSCHHHHHHHHHHHHTGGGTCEEECCHHH
T ss_pred --ccccCCCcceEEeCCCCCcHHHHHHHHcC-----CCCceEEEEEeCCCCchhHHHHHHHHHHhcCCCcCceeeccHHH
Confidence 57999999999999999999999999996 8999999997 8999999999999999999986 89999999
Q ss_pred hhhhhccccchhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhcccCchhhhhhhhhhc
Q 014834 297 EYKSDIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSA 376 (417)
Q Consensus 297 e~~~dl~ge~t~L~G~~pA~iea~~d~~v~~Gl~~e~A~~~~~q~~~~g~~~li~e~G~~~l~~~vss~~~~~~~~~~~~ 376 (417)
|+++||||||++|||+++++++++||.+|++|++|+.|+.++.+++. .|+++|+++|+.+|+++|| +|++||++..+
T Consensus 213 EtetDLfGEQaVLcGgl~~li~agFetLveaGy~P~~a~~~~~~e~k-lIvdli~egGi~~M~~siS--~TAe~G~~~~~ 289 (491)
T 3ulk_A 213 EVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWE-TITEALKQGGITLMMDRLS--NPAKLRAYALS 289 (491)
T ss_dssp HHHHHHHHHHTTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTSC--HHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-HHHHHHHhCCHHHHHHhcC--chhhccchhhh
Confidence 99999999999999999999999999999999999999999888887 9999999999999999999 88899998433
Q ss_pred -c-ChhHHHHHHHHHHhhccChHHHHHHHcCCcccccccccc
Q 014834 377 -S-YYPCMEILYECYEDVAAGSEIRSVVLAGRRFYVSSYRLR 416 (417)
Q Consensus 377 -~-~~~~~~~m~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~ 416 (417)
+ .+.+++.|+++|++||+|+|+|+|+.+++..+++...||
T Consensus 290 ~~~~~~~k~~~~~~l~~I~sG~Fa~~~~~e~~~g~~~l~~~R 331 (491)
T 3ulk_A 290 EQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWR 331 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhCCcchHHHHHHHHcCChhHHHHH
Confidence 3 446778999999999999999999999999999888776
No 3
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=100.00 E-value=1.3e-38 Score=317.70 Aligned_cols=281 Identities=29% Similarity=0.518 Sum_probs=247.9
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
..+++ ++|+|||+|+||.++|++|+++ |++|++++++.+++.+.+.+.|+.. . ++++++++||+||++
T Consensus 12 ~~l~~-~~I~IIG~G~mG~alA~~L~~~------G~~V~~~~~~~~~~~~~a~~~G~~~----~-~~~e~~~~aDvVila 79 (338)
T 1np3_A 12 SIIQG-KKVAIIGYGSQGHAHACNLKDS------GVDVTVGLRSGSATVAKAEAHGLKV----A-DVKTAVAAADVVMIL 79 (338)
T ss_dssp HHHHT-SCEEEECCSHHHHHHHHHHHHT------TCCEEEECCTTCHHHHHHHHTTCEE----E-CHHHHHHTCSEEEEC
T ss_pred chhcC-CEEEEECchHHHHHHHHHHHHC------cCEEEEEECChHHHHHHHHHCCCEE----c-cHHHHHhcCCEEEEe
Confidence 56788 8999999999999999999999 9999888887666678888899874 3 888999999999999
Q ss_pred cCCchHHHHHH-HHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEe
Q 014834 186 ISDAAQADNYE-KIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 186 vpd~~~~~Vl~-eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~lia 264 (417)
+|+..+.++++ ++.+++++|++|++++|+++ .... +..+.+++|+++||++|++.++++|+.| +|.+++++
T Consensus 80 vp~~~~~~v~~~~i~~~l~~~~ivi~~~gv~~-~~~~--~~~~~~~~vv~~~P~gp~~a~~~l~~~G-----~g~~~ii~ 151 (338)
T 1np3_A 80 TPDEFQGRLYKEEIEPNLKKGATLAFAHGFSI-HYNQ--VVPRADLDVIMIAPKAPGHTVRSEFVKG-----GGIPDLIA 151 (338)
T ss_dssp SCHHHHHHHHHHHTGGGCCTTCEEEESCCHHH-HTTS--SCCCTTCEEEEEEESSCSHHHHHHHHTT-----CCCCEEEE
T ss_pred CCcHHHHHHHHHHHHhhCCCCCEEEEcCCchh-HHHh--hcCCCCcEEEeccCCCCchhHHHHHhcc-----CCCeEEEE
Confidence 99999999998 99999999999999999987 4433 3346778999999999999999999975 79999889
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCc--eeccchhhhhhhhccccchhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 014834 265 VHQDVDGRATNVALGWSVALGSPF--TFATTLEQEYKSDIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYKNTVECI 342 (417)
Q Consensus 265 v~~dvsgea~e~a~~L~~alG~~~--~iettf~~e~~~dl~ge~t~L~G~~pA~iea~~d~~v~~Gl~~e~A~~~~~q~~ 342 (417)
++++.++++.+.+..|+..+|..+ ++++++++|...|+++++++|||++|+++..+++.+++.|+++++||++++++.
T Consensus 152 ~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a~~e~~~~~ 231 (338)
T 1np3_A 152 IYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMAYFECLHEL 231 (338)
T ss_dssp EEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTTH
T ss_pred ecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHhhhHH
Confidence 999889999999999999999755 788889999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHHHhcHHHHHhcccCchhhhhhhhhhc-c--ChhHHHHHHHHHHhhccChHHHHHHHcCCccc
Q 014834 343 TGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSA-S--YYPCMEILYECYEDVAAGSEIRSVVLAGRRFY 409 (417)
Q Consensus 343 ~~g~~~li~e~G~~~l~~~vss~~~~~~~~~~~~-~--~~~~~~~m~~~~~~v~~g~~~~~~~~~~~~~~ 409 (417)
. .+.+++..+|+..|+...+ +.+.|+++... + .+..++.|+++++.|++|+|+++|+.+++...
T Consensus 232 ~-~~~~~~~~gg~~~~r~a~s--~p~~~~d~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~r 298 (338)
T 1np3_A 232 K-LIVDLMYEGGIANMNYSIS--NNAEYGEYVTGPEVINAESRAAMRNALKRIQDGEYAKMFITEGAANY 298 (338)
T ss_dssp H-HHHHHHHHHHHHHHHHHSC--HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTS
T ss_pred H-HHHHHHHhcCHHHHHHhcC--CHHHHhhhhcCCccccHHHHHHHHHHHHHHhCCHHHHHHHHHHhccc
Confidence 7 9999999999888876666 56689997543 2 26678999999999999999999999876533
No 4
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=100.00 E-value=4.1e-33 Score=270.97 Aligned_cols=221 Identities=15% Similarity=0.116 Sum_probs=192.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc---EEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~---~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd 188 (417)
+||+|||+|+||.+++++|.++ |+ +|++++|+.++..+.+.+.|+.. ..++.++++++|+||+++||
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~------g~~~~~V~v~dr~~~~~~~l~~~~gi~~----~~~~~~~~~~aDvVilav~p 73 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN------GYDPNRICVTNRSLDKLDFFKEKCGVHT----TQDNRQGALNADVVVLAVKP 73 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT------TCCGGGEEEECSSSHHHHHHHHTTCCEE----ESCHHHHHSSCSEEEECSCG
T ss_pred CEEEEEcccHHHHHHHHHHHHC------CCCCCeEEEEeCCHHHHHHHHHHcCCEE----eCChHHHHhcCCeEEEEeCH
Confidence 7899999999999999999999 88 89888887665555555568875 57899999999999999999
Q ss_pred chHHHHHHHHHhc-CCCCcE-EEEecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeec
Q 014834 189 AAQADNYEKIFSC-MKPNSI-LGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (417)
Q Consensus 189 ~~~~~Vl~eI~~~-lk~gai-Li~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~ 266 (417)
+...+++++|.++ ++++++ |++++|+++..++. .++.+.+++++|||+|..+ |+|++. +++.
T Consensus 74 ~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~---~l~~~~~vvr~mPn~p~~v------------~~g~~~-l~~~ 137 (280)
T 3tri_A 74 HQIKMVCEELKDILSETKILVISLAVGVTTPLIEK---WLGKASRIVRAMPNTPSSV------------RAGATG-LFAN 137 (280)
T ss_dssp GGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHH---HHTCCSSEEEEECCGGGGG------------TCEEEE-EECC
T ss_pred HHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHH---HcCCCCeEEEEecCChHHh------------cCccEE-EEeC
Confidence 9999999999998 888865 45889999887765 4566678999999999987 688888 5667
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHHH----HHHHHHHHHHcCCCHHHHHHHHHHHH
Q 014834 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGI----VESLFRRFTENGMSEDLAYKNTVECI 342 (417)
Q Consensus 267 ~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA~----iea~~d~~v~~Gl~~e~A~~~~~q~~ 342 (417)
.+++.++.+.+..|+..+|.... ...+++++..++++|++|+| ++++.|.+++.|+|+++|++++.|++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~~~-------v~~E~~~d~~talsgsgpa~~~~~~eal~~a~v~~Gl~~~~a~~l~~~t~ 210 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLVIW-------VSSEDQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTV 210 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEEEE-------CSSHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCeEE-------ECCHHHhhHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 88899999999999999996411 12456788899999999995 69999999999999999999999999
Q ss_pred HHHHHHHHHHhcH--HHHHhcccCch
Q 014834 343 TGIISKIISTQGM--LAVYNSFSGED 366 (417)
Q Consensus 343 ~~g~~~li~e~G~--~~l~~~vss~~ 366 (417)
. |+++|+.++|. ..|+|.||||.
T Consensus 211 ~-G~a~~~~~~~~~p~~l~~~v~spg 235 (280)
T 3tri_A 211 L-GAARMALETEQSVVQLRQFVTSPG 235 (280)
T ss_dssp H-HHHHHHHTCSSCHHHHHHHHCCTT
T ss_pred H-HHHHHHHhcCCCHHHHHHhccCCC
Confidence 9 99999999997 99999999994
No 5
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.97 E-value=1.1e-30 Score=247.80 Aligned_cols=221 Identities=19% Similarity=0.254 Sum_probs=175.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc----EEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI----VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~----~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavp 187 (417)
+||+|||+|+||.+++++|.++ |+ +|++++|+.++..+.+.+.|+.. ..++.|+++++|+||+++|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~------g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~~~e~~~~aDvVilav~ 72 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK------NIVSSNQIICSDLNTANLKNASEKYGLTT----TTDNNEVAKNADILILSIK 72 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSCHHHHHHHCSEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhC------CCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCChHHHHHhCCEEEEEeC
Confidence 7899999999999999999999 97 89888877555444445568875 6789999999999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEE-EecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeec
Q 014834 188 DAAQADNYEKIFSCMKPNSILG-LSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi-~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~ 266 (417)
|+...++++++.++++++++|+ +++|+++..+.+ .++.+.+++++|||+|... |+|+.. +++.
T Consensus 73 ~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~---~~~~~~~~v~~~p~~p~~~------------~~g~~~-~~~~ 136 (247)
T 3gt0_A 73 PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTEN---AFNKKVKVVRVMPNTPALV------------GEGMSA-LCPN 136 (247)
T ss_dssp TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHH---HHCSCCEEEEEECCGGGGG------------TCEEEE-EEEC
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHH---HhCCCCcEEEEeCChHHHH------------cCceEE-EEeC
Confidence 9999999999999999998755 889998876654 4456678999999999887 577776 6667
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 014834 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG----IVESLFRRFTENGMSEDLAYKNTVECI 342 (417)
Q Consensus 267 ~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA----~iea~~d~~v~~Gl~~e~A~~~~~q~~ 342 (417)
...+.++.+.+..++..+|.. + +..++.++..++++|++|+ ++|++.+.+++.|+++++|++++.+++
T Consensus 137 ~~~~~~~~~~~~~l~~~~G~~--~------~~~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~ 208 (247)
T 3gt0_A 137 EMVTEKDLEDVLNIFNSFGQT--E------IVSEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAV 208 (247)
T ss_dssp TTCCHHHHHHHHHHHGGGEEE--E------ECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCE--E------EeCHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 778899999999999999963 2 2234568888999999998 478888889999999999999999999
Q ss_pred HHHHHHHHHHhcH--HHHHhcccCchh
Q 014834 343 TGIISKIISTQGM--LAVYNSFSGEDK 367 (417)
Q Consensus 343 ~~g~~~li~e~G~--~~l~~~vss~~~ 367 (417)
. ++++|+.++|. ..|+|+||||.-
T Consensus 209 ~-gs~~~~~~~~~~p~~l~~~v~spgG 234 (247)
T 3gt0_A 209 L-GSAKMVLETGIHPGELKDMVCSPGG 234 (247)
T ss_dssp H-HHHHHHHHSCC--------------
T ss_pred H-HHHHHHHHcCCCHHHHHHhcCCCCc
Confidence 9 99999999998 999999999963
No 6
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.93 E-value=1.1e-24 Score=214.97 Aligned_cols=222 Identities=14% Similarity=0.090 Sum_probs=178.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC----cEEEEEecCCh-hhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEcc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD----IVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G----~~ViVg~r~~s-~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
+||+|||+|+||.++|.+|.++ | ++|++++|+.+ ...+...+.|+.. ..++.++++++|+||+++
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~------G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~----~~~~~e~~~~aDvVilav 92 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA------GVLAAHKIMASSPDMDLATVSALRKMGVKL----TPHNKETVQHSDVLFLAV 92 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT------TSSCGGGEEEECSCTTSHHHHHHHHHTCEE----ESCHHHHHHHCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCCcceEEEECCCccHHHHHHHHHcCCEE----eCChHHHhccCCEEEEEe
Confidence 7899999999999999999998 8 78888887653 2344555678875 567889999999999999
Q ss_pred CCchHHHHHHHHHhcCCCCcEEEE-ecCchhhhhhhccc-CCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEe
Q 014834 187 SDAAQADNYEKIFSCMKPNSILGL-SHGFLLGHLQSIGL-DFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~gaiLi~-a~G~~i~~~~~~~i-~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~lia 264 (417)
||+...+++++|.+.++++++|+. +.|+.+..+.+... .+ .+.+|++.||++|... +.|... ++
T Consensus 93 ~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~-~~~~vv~~~p~~p~~~------------~~g~~v-~~ 158 (322)
T 2izz_A 93 KPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFR-PAPRVIRCMTNTPVVV------------REGATV-YA 158 (322)
T ss_dssp CGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTS-SCCEEEEEECCGGGGG------------TCEEEE-EE
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcC-CCCeEEEEeCCcHHHH------------cCCeEE-EE
Confidence 999999999999999999998775 46887654433100 11 2457999999999876 456654 55
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHHH----HHHHHHHHHHcCCCHHHHHHHHHH
Q 014834 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGI----VESLFRRFTENGMSEDLAYKNTVE 340 (417)
Q Consensus 265 v~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA~----iea~~d~~v~~Gl~~e~A~~~~~q 340 (417)
...+.+.++.+.+..++..+|.. + +..+++++..+.++|++|++ ++++.+.+++.|+++++++.++.+
T Consensus 159 ~g~~~~~~~~~~v~~ll~~~G~~--~------~~~e~~~~~~~a~~g~gpa~~~~~~eala~a~~~~Gl~~~~a~~l~~~ 230 (322)
T 2izz_A 159 TGTHAQVEDGRLMEQLLSSVGFC--T------EVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQ 230 (322)
T ss_dssp ECTTCCHHHHHHHHHHHHTTEEE--E------ECCGGGHHHHHHHTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhCCCE--E------EeCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 56667789999999999999953 1 22356788889999999884 788889999999999999999999
Q ss_pred HHHHHHHHHHHHhcH--HHHHhcccCch
Q 014834 341 CITGIISKIISTQGM--LAVYNSFSGED 366 (417)
Q Consensus 341 ~~~~g~~~li~e~G~--~~l~~~vss~~ 366 (417)
++. ++++++.++|. ..+++.+++|.
T Consensus 231 ~~~-g~~~~~~~~~~~p~~l~~~v~sp~ 257 (322)
T 2izz_A 231 ALL-GAAKMLLHSEQHPGQLKDNVSSPG 257 (322)
T ss_dssp HHH-HHHHHHHHCSSCHHHHHHHHCCTT
T ss_pred HHH-HHHHHHHhcCCCHHHHHHhCCCCC
Confidence 999 99999988865 67899999884
No 7
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.90 E-value=2.3e-22 Score=190.40 Aligned_cols=213 Identities=13% Similarity=0.185 Sum_probs=169.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC----cEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD----IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G----~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavp 187 (417)
+||+|||+|+||.+++.+|.++ | ++|.+++|+.++ .|+.. ..++.++++++|+||+++|
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~------g~~~~~~v~~~~~~~~~-------~g~~~----~~~~~~~~~~~D~vi~~v~ 67 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA------NIIKKENLFYYGPSKKN-------TTLNY----MSSNEELARHCDIIVCAVK 67 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TSSCGGGEEEECSSCCS-------SSSEE----CSCHHHHHHHCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCCCCCeEEEEeCCccc-------CceEE----eCCHHHHHhcCCEEEEEeC
Confidence 6899999999999999999998 8 688888776443 57765 5678899999999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecC
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~ 267 (417)
+....++++++.++++++.+|++++|+....+.+ .++.+.++++++|+.|... +.| ...++...
T Consensus 68 ~~~~~~v~~~l~~~l~~~~vv~~~~gi~~~~l~~---~~~~~~~~v~~~p~~p~~~------------~~g-~~~~~~~~ 131 (262)
T 2rcy_A 68 PDIAGSVLNNIKPYLSSKLLISICGGLNIGKLEE---MVGSENKIVWVMPNTPCLV------------GEG-SFIYCSNK 131 (262)
T ss_dssp TTTHHHHHHHSGGGCTTCEEEECCSSCCHHHHHH---HHCTTSEEEEEECCGGGGG------------TCE-EEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHH---HhCCCCcEEEECCChHHHH------------cCC-eEEEEeCC
Confidence 9999999999999885444667889998766554 3455557889999998776 577 44466666
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 014834 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG----IVESLFRRFTENGMSEDLAYKNTVECIT 343 (417)
Q Consensus 268 dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA----~iea~~d~~v~~Gl~~e~A~~~~~q~~~ 343 (417)
..+.+..+.+..++..+|. .+. ..++.++..++++++.|+ +++++.+.+++.|++++.++..+.+.+.
T Consensus 132 ~~~~~~~~~~~~ll~~~G~--~~~------~~~~~~~~~~a~~~~~~~~~~~~~~al~~~~~~~Gl~~~~~~~~~~~~~~ 203 (262)
T 2rcy_A 132 NVNSTDKKYVNDIFNSCGI--IHE------IKEKDMDIATAISGCGPAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIK 203 (262)
T ss_dssp TCCHHHHHHHHHHHHTSEE--EEE------CCGGGHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCC--EEE------eCHHHccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 6778899999999999994 222 233457777888887777 4777888889999999999999999888
Q ss_pred HHHHHHHHHhcH--HHHHhcccCch
Q 014834 344 GIISKIISTQGM--LAVYNSFSGED 366 (417)
Q Consensus 344 ~g~~~li~e~G~--~~l~~~vss~~ 366 (417)
++.++..+++. ..++|.+++|.
T Consensus 204 -~~~~~~~~~~~~~~~l~d~~~~~~ 227 (262)
T 2rcy_A 204 -GSVEMVKKSDQPVQQLKDNIVSPG 227 (262)
T ss_dssp -HHHHHHHHCSSCHHHHHHHHCCTT
T ss_pred -HHHHHHHhcCCCHHHHHHhcCCCC
Confidence 88888876554 56677777664
No 8
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.89 E-value=2e-22 Score=191.13 Aligned_cols=217 Identities=16% Similarity=0.143 Sum_probs=171.3
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
|+||+|||+|+||.+++.+|.+. |++|.+++++.++..+.+.+.|+.. ..+++++++++|+|++++|+..
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~------g~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~D~Vi~~v~~~~ 72 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT------PHELIISGSSLERSKEIAEQLALPY----AMSHQDLIDQVDLVILGIKPQL 72 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS------SCEEEEECSSHHHHHHHHHHHTCCB----CSSHHHHHHTCSEEEECSCGGG
T ss_pred ccEEEEECCCHHHHHHHHHHHhC------CCeEEEECCCHHHHHHHHHHcCCEe----eCCHHHHHhcCCEEEEEeCcHh
Confidence 47999999999999999999988 8888887776544444444558764 5688899999999999999888
Q ss_pred HHHHHHHHHhcCCCCcEEEEe-cCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecCCC
Q 014834 191 QADNYEKIFSCMKPNSILGLS-HGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (417)
Q Consensus 191 ~~~Vl~eI~~~lk~gaiLi~a-~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~dv 269 (417)
+.+++.++ ++|++|+.. .|++...+.+ .++.+.++++.+|+.|... ++|... +.+....
T Consensus 73 ~~~v~~~l----~~~~~vv~~~~~~~~~~l~~---~~~~~~~~v~~~p~~~~~~------------~~g~~~-i~~~~~~ 132 (259)
T 2ahr_A 73 FETVLKPL----HFKQPIISMAAGISLQRLAT---FVGQDLPLLRIMPNMNAQI------------LQSSTA-LTGNALV 132 (259)
T ss_dssp HHHHHTTS----CCCSCEEECCTTCCHHHHHH---HHCTTSCEEEEECCGGGGG------------TCEEEE-EEECTTC
T ss_pred HHHHHHHh----ccCCEEEEeCCCCCHHHHHH---hcCCCCCEEEEcCCchHHH------------cCceEE-EEcCCCC
Confidence 77777553 478877755 6887765554 3344568999999988876 467655 5556666
Q ss_pred CHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 014834 270 DGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG----IVESLFRRFTENGMSEDLAYKNTVECITGI 345 (417)
Q Consensus 270 sgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA----~iea~~d~~v~~Gl~~e~A~~~~~q~~~~g 345 (417)
+.+..+.+..++..+|. ++.. .++.++..+.|+|+.|+ +++++.+.+++.|+++++++.++.+++. +
T Consensus 133 ~~~~~~~~~~ll~~~G~--~~~~------~~~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~~~~~~-~ 203 (259)
T 2ahr_A 133 SQELQARVRDLTDSFGS--TFDI------SEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVL-A 203 (259)
T ss_dssp CHHHHHHHHHHHHTTEE--EEEC------CGGGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHhCCC--EEEe------cHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-H
Confidence 78899999999999993 3332 23457888889998777 4788889999999999999999999998 9
Q ss_pred HHHHHHHhc--HHHHHhcccCch
Q 014834 346 ISKIISTQG--MLAVYNSFSGED 366 (417)
Q Consensus 346 ~~~li~e~G--~~~l~~~vss~~ 366 (417)
+.+++.++| -..+++.+++|.
T Consensus 204 ~~~~~~~~~~~p~~l~~~~~~p~ 226 (259)
T 2ahr_A 204 SASNLKTSSQSPHDFIDAICSPG 226 (259)
T ss_dssp HHHHHHHSSSCHHHHHHHHCCTT
T ss_pred HHHHHHhcCCCHHHHHHhCCCCC
Confidence 999999888 577889998885
No 9
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.89 E-value=3.7e-22 Score=189.12 Aligned_cols=216 Identities=13% Similarity=0.161 Sum_probs=172.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
+||+|||+|+||.+++.+|.+. | ++|.+++|+.++..+.+.+.|+.. ..+..+++ ++|+||+++|+..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~r~~~~~~~~~~~~g~~~----~~~~~~~~-~~D~vi~~v~~~~ 69 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ------GGYRIYIANRGAEKRERLEKELGVET----SATLPELH-SDDVLILAVKPQD 69 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCEEEEECSSHHHHHHHHHHTCCEE----ESSCCCCC-TTSEEEECSCHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC------CCCeEEEECCCHHHHHHHHHhcCCEE----eCCHHHHh-cCCEEEEEeCchh
Confidence 5899999999999999999999 9 899888776544444444458775 45777888 9999999999888
Q ss_pred HHHHHHHHHhcCCCCcEEEEe-cCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecCCC
Q 014834 191 QADNYEKIFSCMKPNSILGLS-HGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (417)
Q Consensus 191 ~~~Vl~eI~~~lk~gaiLi~a-~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~dv 269 (417)
..++++++.+ + +++|++. +|+....+.+ .++++.++++.+|+.|... +.|... +.+....
T Consensus 70 ~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~---~~~~~~~~v~~~~~~~~~~------------~~g~~~-i~~~~~~ 130 (263)
T 1yqg_A 70 MEAACKNIRT--N-GALVLSVAAGLSVGTLSR---YLGGTRRIVRVMPNTPGKI------------GLGVSG-MYAEAEV 130 (263)
T ss_dssp HHHHHTTCCC--T-TCEEEECCTTCCHHHHHH---HTTSCCCEEEEECCGGGGG------------TCEEEE-EECCTTS
T ss_pred HHHHHHHhcc--C-CCEEEEecCCCCHHHHHH---HcCCCCcEEEEcCCHHHHH------------cCceEE-EEcCCCC
Confidence 8888877765 5 7887765 8887765554 4455678999999988776 467776 4556666
Q ss_pred CHHHHHHHHHHHHHhCCCceeccchhhhhh-hhccccchhhhchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Q 014834 270 DGRATNVALGWSVALGSPFTFATTLEQEYK-SDIFGERGILLGAVHG----IVESLFRRFTENGMSEDLAYKNTVECITG 344 (417)
Q Consensus 270 sgea~e~a~~L~~alG~~~~iettf~~e~~-~dl~ge~t~L~G~~pA----~iea~~d~~v~~Gl~~e~A~~~~~q~~~~ 344 (417)
+.+..+.+..++..+|.. + +.. ++.++..++++|+.|+ +++++.+.+++.|++++.++.++.+++.
T Consensus 131 ~~~~~~~~~~l~~~~g~~--~------~~~~~~~~~~~~al~g~~~~~~~~~~~~l~e~~~~~G~~~~~~~~~~~~~~~- 201 (263)
T 1yqg_A 131 SETDRRIADRIMKSVGLT--V------WLDDEEKMHGITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFK- 201 (263)
T ss_dssp CHHHHHHHHHHHHTTEEE--E------ECSSTTHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHhCCCE--E------EeCChhhccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-
Confidence 788999999999999853 1 222 4578889999998887 4667788889999999999999999988
Q ss_pred HHHHHHHHhc--HHHHHhcccCch
Q 014834 345 IISKIISTQG--MLAVYNSFSGED 366 (417)
Q Consensus 345 g~~~li~e~G--~~~l~~~vss~~ 366 (417)
+..+|+.++| ...+++.+++|.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~ 225 (263)
T 1yqg_A 202 GAVALAEQTGEDFEKLQKNVTSKG 225 (263)
T ss_dssp HHHHHHHHHCCCHHHHHHHTCCTT
T ss_pred HHHHHHHhcCCCHHHHHHhcCCCC
Confidence 9999999999 578899999884
No 10
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.85 E-value=3.8e-20 Score=178.59 Aligned_cols=211 Identities=14% Similarity=0.061 Sum_probs=153.2
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc
Q 014834 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 111 mkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~ 189 (417)
|+||+|||+ |+||.+++++|.+. |++|++++|+.+ ..+...+.|+. ..+..++++++|+||+++|+.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~------g~~V~~~~r~~~-~~~~~~~~g~~-----~~~~~~~~~~aDvVi~av~~~ 78 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS------AHHLAAIEIAPE-GRDRLQGMGIP-----LTDGDGWIDEADVVVLALPDN 78 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS------SSEEEEECCSHH-HHHHHHHTTCC-----CCCSSGGGGTCSEEEECSCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECCHH-HHHHHHhcCCC-----cCCHHHHhcCCCEEEEcCCch
Confidence 479999999 99999999999999 999987776533 34455557765 246778899999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEEe-cCchhhhhhhcccCCCCCccEEEeccCCCchhH----HHHHhhcccccCCC------
Q 014834 190 AQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSV----RRLYVQGKEINGAG------ 258 (417)
Q Consensus 190 ~~~~Vl~eI~~~lk~gaiLi~a-~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~v----r~ly~~G~~~~G~G------ 258 (417)
...++++++.+.++++++|++. .|..+..+.+ ..++.++++.||+.|+... ... +.|
T Consensus 79 ~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~----~~~~~~~v~~~P~~~~~~~~~~~~~~--------~~g~l~~~~ 146 (286)
T 3c24_A 79 IIEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP----ERADITYFIGHPCHPPLFNDETDPAA--------RTDYHGGIA 146 (286)
T ss_dssp HHHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC----CCTTSEEEEEEECCSCSSCCCCSHHH--------HTCSSSSSS
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCchhHHHHh----hhCCCeEEecCCCCccccccccchhh--------ccCcccccc
Confidence 9999999999999999987754 4555544432 2346789999999987610 000 245
Q ss_pred -ceEEEeecCCCCHHHHHHHHHHHHHhCCC--ceeccchhhhhhhhccccchhhh-chHHH----HHHHHHHHHHHcCCC
Q 014834 259 -INSSFAVHQDVDGRATNVALGWSVALGSP--FTFATTLEQEYKSDIFGERGILL-GAVHG----IVESLFRRFTENGMS 330 (417)
Q Consensus 259 -v~~liav~~dvsgea~e~a~~L~~alG~~--~~iettf~~e~~~dl~ge~t~L~-G~~pA----~iea~~d~~v~~Gl~ 330 (417)
.+.+++ ....+++..+.+..++..+|.+ +++... +...|.++ .+++ |+.++ ++|++.+.+++.|++
T Consensus 147 ~~~~i~~-~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~---~~~~~~~~--~a~~n~~~~~~~~~~~eal~~~~~~~Gl~ 220 (286)
T 3c24_A 147 KQAIVCA-LMQGPEEHYAIGADICETMWSPVTRTHRVT---TEQLAILE--PGLSEMVAMPFVETMVHAVDECADRYGID 220 (286)
T ss_dssp CEEEEEE-EEESCTHHHHHHHHHHHHHTCSEEEEEECC---HHHHHHHT--THHHHTTHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cceeeee-ccCCCHHHHHHHHHHHHHhcCCcceEEEeC---hhHhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 344333 2235678999999999999973 233332 22333332 3333 33334 678888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 014834 331 EDLAYKNTVECITGIISKIIST 352 (417)
Q Consensus 331 ~e~A~~~~~q~~~~g~~~li~e 352 (417)
++++++++.+++. ++++++.+
T Consensus 221 ~~~~~~~~~~~~~-~~~~~~~~ 241 (286)
T 3c24_A 221 RQAALDFMIGHLN-VEIAMWFG 241 (286)
T ss_dssp HHHHHHHHHHHHH-HHHHHHTT
T ss_pred HHHHHHHHHHHHH-HHHHHHHh
Confidence 9999999999998 88877755
No 11
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.84 E-value=8.4e-21 Score=182.79 Aligned_cols=230 Identities=11% Similarity=0.029 Sum_probs=165.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
++||+|||+|+||.+++++|.+. +.|++|++++++ ....+.+.+.|... ....+++++++++|+||+++|+..
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~----g~~~~V~~~d~~-~~~~~~~~~~g~~~--~~~~~~~~~~~~aDvVilavp~~~ 78 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD----HPHYKIVGYNRS-DRSRDIALERGIVD--EATADFKVFAALADVIILAVPIKK 78 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSS-HHHHHHHHHTTSCS--EEESCTTTTGGGCSEEEECSCHHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhC----CCCcEEEEEcCC-HHHHHHHHHcCCcc--cccCCHHHhhcCCCEEEEcCCHHH
Confidence 38999999999999999999987 123578776665 34455566677631 014577888999999999999999
Q ss_pred HHHHHHHHHhc-CCCCcEEEEecCchh---hhhhhcccCCCC-CccEEEeccC------CCchhHHHHHhhcccccCCCc
Q 014834 191 QADNYEKIFSC-MKPNSILGLSHGFLL---GHLQSIGLDFPK-NIGVIAVCPK------GMGPSVRRLYVQGKEINGAGI 259 (417)
Q Consensus 191 ~~~Vl~eI~~~-lk~gaiLi~a~G~~i---~~~~~~~i~~~~-dv~VI~v~Pn------tpg~~vr~ly~~G~~~~G~Gv 259 (417)
..++++++.++ ++++++|+++++... ..+.+ .+++ .++++..||. +|+....+ ...|.
T Consensus 79 ~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~---~l~~~~~~~v~~~P~~g~~~~g~~~a~~~--------l~~g~ 147 (290)
T 3b1f_A 79 TIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEY---YLKDKPVQFVGSHPMAGSHKSGAVAANVN--------LFENA 147 (290)
T ss_dssp HHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHH---HHTTSSCEEEEEEEC-----CCTTSCCTT--------TTTTS
T ss_pred HHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHH---hccccCCEEEEeCCcCCCCcchHHHhhHH--------HhCCC
Confidence 99999999999 999999988877654 33332 2333 5678877886 44432111 12567
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccc-hhhhchHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 014834 260 NSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGER-GILLGAVHGIVESLFRRFTENGMSEDLAYKNT 338 (417)
Q Consensus 260 ~~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~-t~L~G~~pA~iea~~d~~v~~Gl~~e~A~~~~ 338 (417)
+..++++...+.++.+.+..++..+|.. ++.++.+ ..+.. +.++++.|.+.-++.+.+...|++++.++.++
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~l~~~~G~~-~~~~~~~------~~d~~~a~~s~~~~~~a~~~~~~~~~~g~~~~~~~~la 220 (290)
T 3b1f_A 148 YYIFSPSCLTKPNTIPALQDLLSGLHAR-YVEIDAA------EHDCVTSQISHFPHIIASSLMKQAGDFSESHEMTKHFA 220 (290)
T ss_dssp EEEEEECTTCCTTHHHHHHHHTGGGCCE-EEECCHH------HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCTHHHHHC
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCE-EEEcCHH------HHHHHHHHHhhHHHHHHHHHHHHHHhcccchhhHHhhc
Confidence 7778888777888999999999999963 3332211 12332 55677777766666666666788889999999
Q ss_pred HHHHHHHHHHHHHHhcHHHHHhcccCchh
Q 014834 339 VECITGIISKIISTQGMLAVYNSFSGEDK 367 (417)
Q Consensus 339 ~q~~~~g~~~li~e~G~~~l~~~vss~~~ 367 (417)
.+++. ++++|. ..--..++|.|++|..
T Consensus 221 ~~~~~-~~~rla-~~~p~~~~~~~~~n~~ 247 (290)
T 3b1f_A 221 AGGFR-DMTRIA-ESEPGMWTSILLTNQE 247 (290)
T ss_dssp CHHHH-HTTGGG-GSCHHHHHHHHHHSHH
T ss_pred cccHH-hhhhhh-cCCHHHHHHHHHHCHH
Confidence 99998 888777 3333666888887753
No 12
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.83 E-value=7.1e-21 Score=182.52 Aligned_cols=266 Identities=11% Similarity=0.032 Sum_probs=180.7
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC-cCCEEEEccC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLIS 187 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~-~ADIViLavp 187 (417)
|+||+|||+|+||.+++++|++. |+ +|++++++ ....+.+.+.|+.. ....+++++++ ++|+||+++|
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~------g~~~~V~~~d~~-~~~~~~~~~~g~~~--~~~~~~~~~~~~~aDvVilavp 71 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDIN-PESISKAVDLGIID--EGTTSIAKVEDFSPDFVMLSSP 71 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECSC-HHHHHHHHHTTSCS--EEESCGGGGGGTCCSEEEECSC
T ss_pred CcEEEEEecCHHHHHHHHHHHhc------CCCcEEEEEeCC-HHHHHHHHHCCCcc--cccCCHHHHhcCCCCEEEEcCC
Confidence 58999999999999999999998 87 88776665 34456677778741 11357888899 9999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecCchhh---hhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEe
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~---~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~lia 264 (417)
+....++++++.++++++++|+++++.+.. .+.+ .+++ .++..||...... ..........+.|.+..++
T Consensus 72 ~~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~---~l~~--~~v~~~p~~~~~~--~gp~~a~~~l~~g~~~~~~ 144 (281)
T 2g5c_A 72 VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN---ILGK--RFVGGHPIAGTEK--SGVEYSLDNLYEGKKVILT 144 (281)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH---HHGG--GEECEEEECCCSC--CSGGGCCSSTTTTCEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHH---hccc--cceeeccccCCcc--CChhhhhhHHhCCCCEEEe
Confidence 999999999999999999999888776532 2222 2232 2665566321100 0000001112357878788
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHH
Q 014834 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIV-ESLFRRFTENGMSEDLAYKNTVECIT 343 (417)
Q Consensus 265 v~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA~i-ea~~d~~v~~Gl~~e~A~~~~~q~~~ 343 (417)
++...+.++.+.+..++..+|.. ++.++ + ...++.+.++|.+|+++ -++.+.+.+.|++++.++.++.+++.
T Consensus 145 ~~~~~~~~~~~~v~~l~~~~g~~-~~~~~---~---~~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (281)
T 2g5c_A 145 PTKKTDKKRLKLVKRVWEDVGGV-VEYMS---P---ELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGGGFK 217 (281)
T ss_dssp CCSSSCHHHHHHHHHHHHHTTCE-EEECC---H---HHHHHHHHHHTHHHHHHHHHHHHHHHHHCBTTBCGGGCCTTTGG
T ss_pred cCCCCCHHHHHHHHHHHHHcCCE-EEEcC---H---HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhhccccHH
Confidence 88778889999999999999963 33322 1 12366688999999974 77888888889999999999999988
Q ss_pred HHHHHHHHHhcHHHHHhcccCchhhhhhhhhhccChhHHHHHHHHHHhhccChH--HHHHHHcCC
Q 014834 344 GIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYECYEDVAAGSE--IRSVVLAGR 406 (417)
Q Consensus 344 ~g~~~li~e~G~~~l~~~vss~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~g~~--~~~~~~~~~ 406 (417)
++++|.. .--..++|.|++|....... -+...+.|.++-+.|++|++ .++++.+.+
T Consensus 218 -~~~r~~~-~~p~~~~~~~~sn~~~~~~~-----l~~~~~~l~~~~~~i~~~d~~~l~~~~~~~~ 275 (281)
T 2g5c_A 218 -DFTRIAK-SDPIMWRDIFLENKENVMKA-----IEGFEKSLNHLKELIVREAEEELVEYLKEVK 275 (281)
T ss_dssp -GC---CC-SCHHHHHHHHHHTHHHHHHH-----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -HHhHHhc-CCHHHHHHHHHHCHHHHHHH-----HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 7777764 34577788887765321111 12233444556666666664 466655443
No 13
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.80 E-value=1.8e-19 Score=178.04 Aligned_cols=209 Identities=12% Similarity=0.028 Sum_probs=153.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHHcCceecCCCcCCHHh-hcCcCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE-TISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~E-a~~~ADIViLavpd 188 (417)
+||+|||+|+||.++|++|++. |+ +|++++++ ....+.+.+.|+.. ....++++ ++++||+||+++|+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~------G~~~~V~~~dr~-~~~~~~a~~~G~~~--~~~~~~~~~~~~~aDvVilavp~ 104 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDIN-PESISKAVDLGIID--EGTTSIAKVEDFSPDFVMLSSPV 104 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECSC-HHHHHHHHHTTSCS--EEESCTTGGGGGCCSEEEECSCG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC------CCCCEEEEEECC-HHHHHHHHHCCCcc--hhcCCHHHHhhccCCEEEEeCCH
Confidence 7999999999999999999999 98 88777665 44567778888741 12457888 89999999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEEEecCch---hhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEee
Q 014834 189 AAQADNYEKIFSCMKPNSILGLSHGFL---LGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiLi~a~G~~---i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav 265 (417)
....++++++.++++++++|+++++++ +..+.+ .+|+ +++..||...... ..+...+.....|..+++++
T Consensus 105 ~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~---~l~~--~~v~~hPm~G~e~--sG~~~A~~~Lf~g~~~il~~ 177 (314)
T 3ggo_A 105 RTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN---ILGK--RFVGGHPIAGTEK--SGVEYSLDNLYEGKKVILTP 177 (314)
T ss_dssp GGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH---HHGG--GEECEEECCCCCC--CSGGGCCTTTTTTCEEEECC
T ss_pred HHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHH---hcCC--CEEecCcccCCcc--cchhhhhhhhhcCCEEEEEe
Confidence 999999999999999999999988875 233332 2233 7999999654221 00111111223567788888
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHH
Q 014834 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIV-ESLFRRFTENGMSEDLAYKNTVECIT 343 (417)
Q Consensus 266 ~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA~i-ea~~d~~v~~Gl~~e~A~~~~~q~~~ 343 (417)
+...+.++.+.+..++..+|.. ++..+ .+..+..+.+.+.+|.++ -++.+.+.+.+.+.+++..++.....
T Consensus 178 ~~~~~~~~~~~v~~l~~~~G~~-v~~~~------~~~hD~~~a~~s~lph~~a~~l~~~~~~~~~~~~~~~~~a~~~fr 249 (314)
T 3ggo_A 178 TKKTDKKRLKLVKRVWEDVGGV-VEYMS------PELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGGGFK 249 (314)
T ss_dssp CTTSCHHHHHHHHHHHHHTTCE-EEECC------HHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSCCGGGCCTTTTT
T ss_pred CCCCCHHHHHHHHHHHHHcCCE-EEEcC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHhhccccHH
Confidence 8888899999999999999963 33332 223556688888999975 55667777777777667666655443
No 14
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.80 E-value=1.3e-18 Score=169.75 Aligned_cols=208 Identities=12% Similarity=0.074 Sum_probs=152.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
+||+||| +|+||.++|++|++. |++|++++++.. .+..+++++||+||+++|+..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~------G~~V~~~~~~~~------------------~~~~~~~~~aDvVilavp~~~ 77 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS------GYPISILDREDW------------------AVAESILANADVVIVSVPINL 77 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT------TCCEEEECTTCG------------------GGHHHHHTTCSEEEECSCGGG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC------CCeEEEEECCcc------------------cCHHHHhcCCCEEEEeCCHHH
Confidence 7999999 999999999999999 999888776432 145678899999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecCCCC
Q 014834 191 QADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD 270 (417)
Q Consensus 191 ~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~dvs 270 (417)
..++++++.++++++++|++++|++....+......+ .+++..||.. ++.. . ...|.+.+++++. +
T Consensus 78 ~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~--~~~v~~hP~~-g~~~-----~----~~~g~~~~l~~~~--~ 143 (298)
T 2pv7_A 78 TLETIERLKPYLTENMLLADLTSVKREPLAKMLEVHT--GAVLGLHPMF-GADI-----A----SMAKQVVVRCDGR--F 143 (298)
T ss_dssp HHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHCS--SEEEEEEECS-CTTC-----S----CCTTCEEEEEEEE--C
T ss_pred HHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhcC--CCEEeeCCCC-CCCc-----h----hhcCCeEEEecCC--C
Confidence 9999999999999999999999886432221001122 4688888842 2220 0 1245566677655 6
Q ss_pred HHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHH----
Q 014834 271 GRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIV-ESLFRRFTENGMSEDLAYKNTVECITGI---- 345 (417)
Q Consensus 271 gea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA~i-ea~~d~~v~~Gl~~e~A~~~~~q~~~~g---- 345 (417)
.++.+.+..++..+|.. ++.++ .+..+..+.+++++|+++ -++.+.+.+.|++++++++++.+... +
T Consensus 144 ~~~~~~v~~l~~~~G~~-~~~~~------~~~~d~~~a~~~~~p~~~a~~l~~~l~~~g~~~~~~~~la~~~f~-~~~~~ 215 (298)
T 2pv7_A 144 PERYEWLLEQIQIWGAK-IYQTN------ATEHDHNMTYIQALRHFSTFANGLHLSKQPINLANLLALSSPIYR-LELAM 215 (298)
T ss_dssp GGGTHHHHHHHHHTTCE-EEECC------HHHHHHHHHHHTHHHHHHHHHHHHHHTTSSCCHHHHHHTCCHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHcCCE-EEECC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcCHHHH-HHHHH
Confidence 67889999999999973 33222 222466688999999974 56777777899999999999999998 6
Q ss_pred HHHHHHHhcHHHHHhcccCch
Q 014834 346 ISKIISTQGMLAVYNSFSGED 366 (417)
Q Consensus 346 ~~~li~e~G~~~l~~~vss~~ 366 (417)
++++. ..--..++|.+++|.
T Consensus 216 ~~ria-~~~p~~~~di~~sn~ 235 (298)
T 2pv7_A 216 IGRLF-AQDAELYADIIMDKS 235 (298)
T ss_dssp HHHHH-TSCHHHHHHHHC---
T ss_pred HHHHh-cCCHHHHHHHHHHCH
Confidence 55554 334477788888764
No 15
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.79 E-value=5.2e-18 Score=162.18 Aligned_cols=231 Identities=12% Similarity=0.042 Sum_probs=163.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCchH
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~~ 191 (417)
+||+|||+|+||.+++++|.+. |++|++++++. ...+.+.+.|+.. ....+++++ +++|+||+++|++..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~-~~~~~~~~~g~~~--~~~~~~~~~-~~~D~vi~av~~~~~ 70 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR------GHYLIGVSRQQ-STCEKAVERQLVD--EAGQDLSLL-QTAKIIFLCTPIQLI 70 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHHTTSCS--EEESCGGGG-TTCSEEEECSCHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC------CCEEEEEECCH-HHHHHHHhCCCCc--cccCCHHHh-CCCCEEEEECCHHHH
Confidence 5899999999999999999998 99988776653 3445556677631 114578888 999999999999998
Q ss_pred HHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecCCCCH
Q 014834 192 ADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDG 271 (417)
Q Consensus 192 ~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~dvsg 271 (417)
.++++++.++++++++|+.+++++....+...-.++ +++..||-.. ... ............|.+..+++....+.
T Consensus 71 ~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~---~~~~~~p~~g-~~~-~gp~~a~~~~~~g~~~~~~~~~~~~~ 145 (279)
T 2f1k_A 71 LPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLWS---GFIGGHPMAG-TAA-QGIDGAEENLFVNAPYVLTPTEYTDP 145 (279)
T ss_dssp HHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHST---TCEEEEECCC-CSC-SSGGGCCTTTTTTCEEEEEECTTCCH
T ss_pred HHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHhC---CEeecCcccC-Ccc-CCHHHHhHHHhCCCcEEEecCCCCCH
Confidence 999999999999999988887776432221001222 5666666431 010 00000001112455666777766788
Q ss_pred HHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHHH-HHHHHHHHHHcCCC--HHHHHHHHHHHHHHHHHH
Q 014834 272 RATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGI-VESLFRRFTENGMS--EDLAYKNTVECITGIISK 348 (417)
Q Consensus 272 ea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA~-iea~~d~~v~~Gl~--~e~A~~~~~q~~~~g~~~ 348 (417)
+..+.+..++..+|.. ++.+ .....++.+.+++.+|++ ..++.+.+++.|++ ++.++.++.+.+. ++++
T Consensus 146 ~~~~~v~~l~~~~g~~-~~~~------~~~~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~~~~-~~~r 217 (279)
T 2f1k_A 146 EQLACLRSVLEPLGVK-IYLC------TPADHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASSGFR-DTSR 217 (279)
T ss_dssp HHHHHHHHHHGGGTCE-EEEC------CHHHHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCHHHH-HHHT
T ss_pred HHHHHHHHHHHHcCCE-EEEc------CHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCCccc-chhc
Confidence 9999999999999963 2222 222356668889998774 55788889999998 8999999999998 8887
Q ss_pred HHHHhcHHHHHhcccCch
Q 014834 349 IISTQGMLAVYNSFSGED 366 (417)
Q Consensus 349 li~e~G~~~l~~~vss~~ 366 (417)
+. ..--..++|.|++|.
T Consensus 218 ~~-~~~p~~~~~~~~s~~ 234 (279)
T 2f1k_A 218 VG-GGNPELGTMMATYNQ 234 (279)
T ss_dssp GG-GSCHHHHHHHHHHSH
T ss_pred cc-CCCHHHHHHHHHHhH
Confidence 76 334477888888774
No 16
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=1.6e-18 Score=173.79 Aligned_cols=204 Identities=12% Similarity=0.077 Sum_probs=147.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCc----CCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG----SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~----ADIViLavp 187 (417)
+||+|||+|+||.++|++|++. |++|++++++ ....+.+.+.|+.. ..++++++++ +|+||+++|
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~------G~~V~~~dr~-~~~~~~a~~~G~~~----~~~~~e~~~~a~~~aDlVilavP 77 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA------NHSVFGYNRS-RSGAKSAVDEGFDV----SADLEATLQRAAAEDALIVLAVP 77 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSC-HHHHHHHHHTTCCE----ESCHHHHHHHHHHTTCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCee----eCCHHHHHHhcccCCCEEEEeCC
Confidence 7899999999999999999999 9998877765 44567788889864 5678877764 799999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecCchhh---hhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEe
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~---~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~lia 264 (417)
+....++++++.++ +++++|+++++++.. .+.. .++ +..++..||..... ...+..+.....+|.+++++
T Consensus 78 ~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~---~~~-~~~~v~~HPmaG~e--~sG~~aa~~~Lf~g~~~ilt 150 (341)
T 3ktd_A 78 MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKA---RNM-QHRYVGSHPMAGTA--NSGWSASMDGLFKRAVWVVT 150 (341)
T ss_dssp HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHH---TTC-GGGEECEEECCSCC---CCGGGCCSSTTTTCEEEEC
T ss_pred HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHH---hCC-CCcEecCCcccccc--ccchhhhhhHHhcCCeEEEE
Confidence 99888999999886 899999999988643 3322 233 57899999954221 11222333344567788899
Q ss_pred ecCCCCHH--------HHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHHHHHH-HHHHHHHcCCCHHHHH
Q 014834 265 VHQDVDGR--------ATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVES-LFRRFTENGMSEDLAY 335 (417)
Q Consensus 265 v~~dvsge--------a~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA~iea-~~d~~v~~Gl~~e~A~ 335 (417)
++...+.+ +++.++.++..+|+. ++..+ .+..|..+++++.+|.++-. +.+.+.+ .++.+.
T Consensus 151 p~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~-v~~~~------~~~HD~~~A~vshlPh~ia~aL~~~~~~---~~~~~~ 220 (341)
T 3ktd_A 151 FDQLFDGTDINSTWISIWKDVVQMALAVGAE-VVPSR------VGPHDAAAARVSHLTHILAETLAIVGDN---GGALSL 220 (341)
T ss_dssp CGGGTSSCCCCHHHHHHHHHHHHHHHHTTCE-EEECC------HHHHHHHHHHHTHHHHHHHHHHHHHHHH---THHHHH
T ss_pred eCCCCChhhhccchHHHHHHHHHHHHHcCCE-EEEeC------HHHHHHHHHHHhHHHHHHHHHHHHHhhc---chHHHH
Confidence 88777767 899999999999963 33333 33456668899999996544 3444322 245566
Q ss_pred HHHHHHHH
Q 014834 336 KNTVECIT 343 (417)
Q Consensus 336 ~~~~q~~~ 343 (417)
.++.....
T Consensus 221 ~laa~gfr 228 (341)
T 3ktd_A 221 SLAAGSYR 228 (341)
T ss_dssp HHCCHHHH
T ss_pred HHccccHH
Confidence 55555444
No 17
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.70 E-value=2.5e-17 Score=158.66 Aligned_cols=213 Identities=12% Similarity=0.027 Sum_probs=137.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEE-EEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVV-KVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~V-iVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
+||+|||+|+||.+++++|.+. ++| .+++++.++..+.+.+.|. . ..+++++++++|+||+++|++.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-------~~v~~v~~~~~~~~~~~~~~~g~-~----~~~~~~~~~~~DvVilav~~~~ 70 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-------YEIGYILSRSIDRARNLAEVYGG-K----AATLEKHPELNGVVFVIVPDRY 70 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----------CCCEECSSHHHHHHHHHHTCC-C----CCSSCCCCC---CEEECSCTTT
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-------CcEEEEEeCCHHHHHHHHHHcCC-c----cCCHHHHHhcCCEEEEeCChHH
Confidence 6899999999999999998753 355 3666654443444445565 3 5677888899999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEec-CchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecCCC
Q 014834 191 QADNYEKIFSCMKPNSILGLSH-GFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (417)
Q Consensus 191 ~~~Vl~eI~~~lk~gaiLi~a~-G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~dv 269 (417)
..+++.++. +++++|+..+ +++...++. ........+..+|++|.... . ..+++..++.
T Consensus 71 ~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~---~~~~~~~p~~~~~g~~~~~~--~--------~~~~~~~~~~---- 130 (276)
T 2i76_A 71 IKTVANHLN---LGDAVLVHCSGFLSSEIFKK---SGRASIHPNFSFSSLEKALE--M--------KDQIVFGLEG---- 130 (276)
T ss_dssp HHHHHTTTC---CSSCCEEECCSSSCGGGGCS---SSEEEEEECSCC--CTTGGG--C--------GGGCCEEECC----
T ss_pred HHHHHHHhc---cCCCEEEECCCCCcHHHHHH---hhccccchhhhcCCCchhHH--H--------hCCCeEEEEe----
Confidence 888887764 6788877655 555544432 11000011123455444330 0 1346554443
Q ss_pred CHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q 014834 270 DGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG-IVESLFRRFTENGMSEDLAYKNTVECITGIISK 348 (417)
Q Consensus 270 sgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA-~iea~~d~~v~~Gl~~e~A~~~~~q~~~~g~~~ 348 (417)
+.+..+.++.++..+|.. ++... +...+.++..+++++..+. ++..+.+.+++.|+++++|+ ..+.+. +.++
T Consensus 131 ~~~~~~~~~~l~~~lG~~-~~~v~---~~~~~~~~~~~~l~~n~~~~~~~~a~~~~~~~Gl~~~~a~--~~~l~~-~~~~ 203 (276)
T 2i76_A 131 DERGLPIVKKIAEEISGK-YFVIP---SEKKKAYHLAAVIASNFPVALAYLSKRIYTLLGLDEPELL--IHTLMK-GVAD 203 (276)
T ss_dssp CTTTHHHHHHHHHHHCSC-EEECC---GGGHHHHHHHHHHHHTTHHHHHHHHHHHHHTTTCSCHHHH--HHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHhCCC-EEEEC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH--HHHHHH-HHHH
Confidence 335688899999999963 23222 2233457777788877666 34445577788999999987 778888 9999
Q ss_pred HHHHhcHHHHHhcccCch
Q 014834 349 IISTQGMLAVYNSFSGED 366 (417)
Q Consensus 349 li~e~G~~~l~~~vss~~ 366 (417)
++.+.| -++.+++|.
T Consensus 204 ~~~~~g---p~~~~tgP~ 218 (276)
T 2i76_A 204 NIKKMR---VECSLTGPV 218 (276)
T ss_dssp HHHHSC---GGGGCCSHH
T ss_pred HHHhcC---hHhhCCCCc
Confidence 999999 389999985
No 18
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.68 E-value=7.9e-16 Score=146.23 Aligned_cols=210 Identities=12% Similarity=0.109 Sum_probs=142.5
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcE-EEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEcc
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~-ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
+.+ +||+|||+|+||.+++..|.+. |++ |.+++|+.++..+.+...|+.. ..+++++++++|+||+++
T Consensus 8 ~~~-m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~Dvvi~av 76 (266)
T 3d1l_A 8 IED-TPIVLIGAGNLATNLAKALYRK------GFRIVQVYSRTEESARELAQKVEAEY----TTDLAEVNPYAKLYIVSL 76 (266)
T ss_dssp GGG-CCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSHHHHHHHHHHTTCEE----ESCGGGSCSCCSEEEECC
T ss_pred CCC-CeEEEEcCCHHHHHHHHHHHHC------CCeEEEEEeCCHHHHHHHHHHcCCce----eCCHHHHhcCCCEEEEec
Confidence 445 7899999999999999999998 987 6777666444444444458765 568889999999999999
Q ss_pred CCchHHHHHHHHHhcCCCCcEEEEe-cCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEee
Q 014834 187 SDAAQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~gaiLi~a-~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav 265 (417)
|+..+.++++++.+.++++++|++. .|+....+.+ .++. .. ..||-.|....+ . ....+.+.++
T Consensus 77 ~~~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~---~~~~-~~--~~~~~~~~~g~~-~------~~~~~~~~~v-- 141 (266)
T 3d1l_A 77 KDSAFAELLQGIVEGKREEALMVHTAGSIPMNVWEG---HVPH-YG--VFYPMQTFSKQR-E------VDFKEIPFFI-- 141 (266)
T ss_dssp CHHHHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTT---TCSS-EE--EEEECCCC---C-C------CCCTTCCEEE--
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEECCCCCchHHHHH---HHHh-cc--CcCCceecCCCc-h------hhcCCCeEEE--
Confidence 9998889999999999999987754 5665544432 2222 11 245544411100 0 0023455544
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHH
Q 014834 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVESLFRRF-TENGMSEDLAYKNTVECITG 344 (417)
Q Consensus 266 ~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA~iea~~d~~-v~~Gl~~e~A~~~~~q~~~~ 344 (417)
...+.+..+.+..++..+|.. ++... +.....++..+.+++..++++-++.+.+ .+.|+++++++.++.+++.
T Consensus 142 -~~~~~~~~~~~~~l~~~~g~~-~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~eal~~~~Gl~~~~~~~l~~~~~~- 215 (266)
T 3d1l_A 142 -EASSTEDAAFLKAIASTLSNR-VYDAD---SEQRKSLHLAAVFTCNFTNHMYALAAELLKKYNLPFDVMLPLIDETAR- 215 (266)
T ss_dssp -EESSHHHHHHHHHHHHTTCSC-EEECC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGGHHHHHHHHH-
T ss_pred -ecCCHHHHHHHHHHHHhcCCc-EEEeC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-
Confidence 223567889999999999963 22221 1111347777888888786544444443 4799999999999988887
Q ss_pred HHHHH
Q 014834 345 IISKI 349 (417)
Q Consensus 345 g~~~l 349 (417)
++.++
T Consensus 216 ~~~~~ 220 (266)
T 3d1l_A 216 KVHEL 220 (266)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 65544
No 19
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.62 E-value=1.3e-14 Score=143.92 Aligned_cols=194 Identities=14% Similarity=0.126 Sum_probs=135.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHH-----------HcCceecC----------CCc
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-----------AAGFTEEN----------GTL 169 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~-----------~~G~~~~~----------~~~ 169 (417)
++||+|||+|+||.+||.+|.++ |++|++++++.+ ..+.+. +.|..... ..+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~------G~~V~l~d~~~~-~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~ 78 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEPR-QITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC 78 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHH-HHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE
T ss_pred CceEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe
Confidence 48999999999999999999999 999988877643 333332 23421100 014
Q ss_pred CCHHhhcCcCCEEEEccCCchH--HHHHHHHHhcCCCCcEEE-EecCchhhhhhhcccCCCCCccEEEeccCCCchhHHH
Q 014834 170 GDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRR 246 (417)
Q Consensus 170 ~s~~Ea~~~ADIViLavpd~~~--~~Vl~eI~~~lk~gaiLi-~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ 246 (417)
.++++++++||+||+++|.... .+++.+|.++++++++|+ .++|+.+..+.+ .++...+++.+||..|.+.
T Consensus 79 ~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~---~~~~~~r~ig~Hp~~P~~~--- 152 (319)
T 2dpo_A 79 TNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT---GLAHVKQCIVAHPVNPPYY--- 152 (319)
T ss_dssp CCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT---TCTTGGGEEEEEECSSTTT---
T ss_pred CCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHH---hcCCCCCeEEeecCCchhh---
Confidence 6888999999999999998643 468899999999999875 667888776654 3444568999999998765
Q ss_pred HHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhc-hHHHHHHHHHHHHH
Q 014834 247 LYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLG-AVHGIVESLFRRFT 325 (417)
Q Consensus 247 ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G-~~pA~iea~~d~~v 325 (417)
.+. .-+.++...+.+..+.+..++..+|...+.-. .+. . +-+++ ...+++..++..+.
T Consensus 153 ----------~~l-veiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~---~~~--~-----Gfi~Nrll~a~~~EA~~l~~ 211 (319)
T 2dpo_A 153 ----------IPL-VELVPHPETSPATVDRTHALMRKIGQSPVRVL---KEI--D-----GFVLNRLQYAIISEAWRLVE 211 (319)
T ss_dssp ----------CCE-EEEEECTTCCHHHHHHHHHHHHHTTCEEEECS---SCC--T-----TTTHHHHHHHHHHHHHHHHH
T ss_pred ----------cce-EEEeCCCCCCHHHHHHHHHHHHHcCCEEEEEC---CCc--C-----CchHHHHHHHHHHHHHHHHH
Confidence 122 23566777889999999999999997421110 111 1 11333 33345555555666
Q ss_pred HcCCCHHHHHHHH
Q 014834 326 ENGMSEDLAYKNT 338 (417)
Q Consensus 326 ~~Gl~~e~A~~~~ 338 (417)
+.|.++++.....
T Consensus 212 ~g~~~~~~id~a~ 224 (319)
T 2dpo_A 212 EGIVSPSDLDLVM 224 (319)
T ss_dssp TTSSCHHHHHHHH
T ss_pred hCCCCHHHHHHHH
Confidence 6677998776643
No 20
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.61 E-value=2.4e-14 Score=138.48 Aligned_cols=213 Identities=14% Similarity=0.096 Sum_probs=143.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc-----------C--------------ceec
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-----------G--------------FTEE 165 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~-----------G--------------~~~~ 165 (417)
++||+|||+|+||.++|+.|... |++|++++++.++ .+.+.+. | +..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~------G~~V~l~d~~~~~-~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~- 75 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH------GFAVTAYDINTDA-LDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY- 75 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHH-HHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCHHH-HHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-
Confidence 48999999999999999999999 9999888776433 3333322 2 232
Q ss_pred CCCcCCHHhhcCcCCEEEEccCCc--hHHHHHHHHHhcCCCCcEEE-EecCchhhhhhhcccCCCCCccEEEeccCCCch
Q 014834 166 NGTLGDIYETISGSDLVLLLISDA--AQADNYEKIFSCMKPNSILG-LSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGP 242 (417)
Q Consensus 166 ~~~~~s~~Ea~~~ADIViLavpd~--~~~~Vl~eI~~~lk~gaiLi-~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~ 242 (417)
..++++++++||+||+++|+. ...+++.++.+.++++++|+ .++++.+..+.. .++...+++.+||..|..
T Consensus 76 ---~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~---~~~~~~~~ig~h~~~p~~ 149 (283)
T 4e12_A 76 ---SDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVG---YTGRGDKFLALHFANHVW 149 (283)
T ss_dssp ---ESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHH---HHSCGGGEEEEEECSSTT
T ss_pred ---eCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHh---hcCCCcceEEEccCCCcc
Confidence 467888999999999999998 55678999999999999877 677887765543 223345899999998866
Q ss_pred hHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHHHHHHHHH
Q 014834 243 SVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVESLFR 322 (417)
Q Consensus 243 ~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA~iea~~d 322 (417)
. +.. ..++++...+.+..+.+..++..+|...+. .. .+.. -| +..-.+.+++..++.
T Consensus 150 ~------------~~l--vevv~~~~t~~~~~~~~~~l~~~~g~~~v~-v~--~~~~--g~----i~nr~~~~~~~ea~~ 206 (283)
T 4e12_A 150 V------------NNT--AEVMGTTKTDPEVYQQVVEFASAIGMVPIE-LK--KEKA--GY----VLNSLLVPLLDAAAE 206 (283)
T ss_dssp T------------SCE--EEEEECTTSCHHHHHHHHHHHHHTTCEEEE-CS--SCCT--TT----THHHHHHHHHHHHHH
T ss_pred c------------Cce--EEEEeCCCCCHHHHHHHHHHHHHcCCEEEE-Ee--cCCC--CE----EehHHHHHHHHHHHH
Confidence 5 122 235667778889999999999999974221 10 0111 11 122233345555566
Q ss_pred HHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHhcHHHHHh
Q 014834 323 RFTENGMSEDLAYKNTVECIT--GIISKIISTQGMLAVYN 360 (417)
Q Consensus 323 ~~v~~Gl~~e~A~~~~~q~~~--~g~~~li~e~G~~~l~~ 360 (417)
.+.+.|.++++..+..-...- -|--.+.-..|++..++
T Consensus 207 l~~~g~~~~~~id~~~~~~~g~~~Gp~~~~D~~Gld~~~~ 246 (283)
T 4e12_A 207 LLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVGLTTAYN 246 (283)
T ss_dssp HHHTTSCCHHHHHHHHHHHHCCSSCHHHHHHHHCHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHhccCCCcCHHHHHHhccHHHHHH
Confidence 666677899875553322110 14445555567655444
No 21
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.61 E-value=4.2e-15 Score=140.90 Aligned_cols=161 Identities=19% Similarity=0.158 Sum_probs=111.4
Q ss_pred chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChh--------------hHHHHHHcCceecCCCc
Q 014834 104 LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR--------------SFAEARAAGFTEENGTL 169 (417)
Q Consensus 104 ~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~--------------s~~~A~~~G~~~~~~~~ 169 (417)
....+.+ +||||||+|+||.++|++|.+. |++|++++|+.++ ..+.+.+.|... .
T Consensus 13 ~~~~~~~-~kIgiIG~G~mG~alA~~L~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 81 (245)
T 3dtt_A 13 ENLYFQG-MKIAVLGTGTVGRTMAGALADL------GHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH----L 81 (245)
T ss_dssp ------C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE----E
T ss_pred cccccCC-CeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee----c
Confidence 3477888 9999999999999999999999 9999988887543 122233334433 5
Q ss_pred CCHHhhcCcCCEEEEccCCchHHHHHHHH-HhcCCCCcEEEEec-Cc----------------h-hhhhhhcccCCCCCc
Q 014834 170 GDIYETISGSDLVLLLISDAAQADNYEKI-FSCMKPNSILGLSH-GF----------------L-LGHLQSIGLDFPKNI 230 (417)
Q Consensus 170 ~s~~Ea~~~ADIViLavpd~~~~~Vl~eI-~~~lk~gaiLi~a~-G~----------------~-i~~~~~~~i~~~~dv 230 (417)
.++.|++++||+||+++|+..+.+++.++ .+.+ +|++|++++ |+ . ...+++ .+| +.
T Consensus 82 ~~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~---~l~-~~ 156 (245)
T 3dtt_A 82 AAFADVAAGAELVVNATEGASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQR---TFP-EA 156 (245)
T ss_dssp EEHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHH---HST-TS
T ss_pred cCHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHH---HCC-CC
Confidence 67899999999999999999999999888 7777 888887655 32 1 223333 344 36
Q ss_pred cEEEeccCCCchhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 231 GVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 231 ~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
+|++.+|+.++++....-.. -.|-..++.... +.++.+.+..++..+|..
T Consensus 157 ~vv~~~~~~~a~v~~~~~~a-----~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~ 206 (245)
T 3dtt_A 157 KVVKTLNTMNASLMVDPGRA-----AGGDHSVFVSGN--DAAAKAEVATLLKSLGHQ 206 (245)
T ss_dssp EEEECSTTSCHHHHHCGGGT-----GGGCCCEEEECS--CHHHHHHHHHHHHHTTCC
T ss_pred eEEEeecccCHHHhcCcccc-----CCCCeeEEEECC--CHHHHHHHHHHHHHcCCC
Confidence 89999999999884321100 012222222122 578999999999999963
No 22
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=99.59 E-value=2.3e-16 Score=162.20 Aligned_cols=103 Identities=18% Similarity=0.351 Sum_probs=90.3
Q ss_pred hccccchhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhcccCchhhhhhhhhhccChh
Q 014834 301 DIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYP 380 (417)
Q Consensus 301 dl~ge~t~L~G~~pA~iea~~d~~v~~Gl~~e~A~~~~~q~~~~g~~~li~e~G~~~l~~~vss~~~~~~~~~~~~~~~~ 380 (417)
..|+..+.++..+.|++++.||++|++|+.||.||++|+|+++ +|+++|+++|+.+|++.|| ||+|||+|.. +..
T Consensus 353 e~f~~Gilmva~v~a~ve~~FEtlveaGy~pE~AYfE~LHElk-LIvdli~e~gl~~M~~sIS--dTAEYG~yl~--~~~ 427 (491)
T 3ulk_A 353 EYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLHELP-LIANTIARKRLYEMNVVIS--DTAEYGNYLF--SYA 427 (491)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHTTGGGHH-HHHHHHHHHHHHHHHHHSC--HHHHHHHHHH--HHH
T ss_pred cchhhhhHHHHHHHHHHhhhHHHHHHcCCcHHHHHHHHHhHHH-HHHHHHHHhhHHHHHhHhh--hHhhhcCEEe--cHH
Confidence 3466665558889999999999999999999999999999999 9999999999999999999 8999999943 256
Q ss_pred HHHHHHHHHHhhccChHHHHHHHcCCccc
Q 014834 381 CMEILYECYEDVAAGSEIRSVVLAGRRFY 409 (417)
Q Consensus 381 ~~~~m~~~~~~v~~g~~~~~~~~~~~~~~ 409 (417)
++..|++++++||+|.|+|++ .+++...
T Consensus 428 ~k~~mk~~l~~Iq~g~fak~~-~e~~~g~ 455 (491)
T 3ulk_A 428 CVPLLKPFMAELQPGDLGKAI-PEGAVDN 455 (491)
T ss_dssp HHHHTHHHHHTCCTTSSSSCC-CCCCCCH
T ss_pred HHHHHHHHHHHccCChHhhhh-hhccCCC
Confidence 778999999999999999984 5655443
No 23
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.58 E-value=4.9e-15 Score=145.69 Aligned_cols=197 Identities=18% Similarity=0.229 Sum_probs=124.5
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
|+||||||+|+||.+||+||.+. |++|++++|+.++ .+...+.|... ..++.|+++++|+||+|+|+..
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~------G~~v~v~dr~~~~-~~~l~~~Ga~~----a~s~~e~~~~~dvv~~~l~~~~ 71 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLVQSA-VDGLVAAGASA----ARSARDAVQGADVVISMLPASQ 71 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSSHHH-HHHHHHTTCEE----CSSHHHHHTTCSEEEECCSCHH
T ss_pred cCEEEEeeehHHHHHHHHHHHhC------CCeEEEEcCCHHH-HHHHHHcCCEE----cCCHHHHHhcCCceeecCCchH
Confidence 78999999999999999999999 9999999887544 55566778886 7899999999999999999887
Q ss_pred HH-HHHHH---HHhcCCCCcEEEEecCchhh---hhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEE
Q 014834 191 QA-DNYEK---IFSCMKPNSILGLSHGFLLG---HLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (417)
Q Consensus 191 ~~-~Vl~e---I~~~lk~gaiLi~a~G~~i~---~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~li 263 (417)
+. +|+.. +.+.+++|++|++++-.... .+.+ ..-..++.++- +|-.=+.. .-++ |--. +
T Consensus 72 ~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~--~~~~~G~~~lD-aPVsGg~~---~A~~-------G~L~-i 137 (300)
T 3obb_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHA--AARERGLAMLD-APVSGGTA---GAAA-------GTLT-F 137 (300)
T ss_dssp HHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHH--HHHTTTCEEEE-CCEESCHH---HHHH-------TCEE-E
T ss_pred HHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEe-cCCCCCHH---HHHh-------CCEE-E
Confidence 75 67753 78899999999988766432 2211 01124566653 33111111 1122 2222 2
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCCceeccc-hhhhhhhhccccchhhhchHHHHHHHHHHHHHHcCCCHHHHHHH
Q 014834 264 AVHQDVDGRATNVALGWSVALGSPFTFATT-LEQEYKSDIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYKN 337 (417)
Q Consensus 264 av~~dvsgea~e~a~~L~~alG~~~~iett-f~~e~~~dl~ge~t~L~G~~pA~iea~~d~~v~~Gl~~e~A~~~ 337 (417)
-+.. +.++.+.++.++..+|.. ++..- .-.=...++ --+.++.+...++.|+ +..+.+.|++++..++.
T Consensus 138 mvGG--~~~~~~~~~p~l~~~g~~-i~~~G~~G~g~~~Kl-~~N~l~~~~~~a~aEa-~~la~~~Gld~~~~~~v 207 (300)
T 3obb_A 138 MVGG--DAEALEKARPLFEAMGRN-IFHAGPDGAGQVAKV-CNNQLLAVLMIGTAEA-MALGVANGLEAKVLAEI 207 (300)
T ss_dssp EEES--CHHHHHHHHHHHHHHEEE-EEEEESTTHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHTTCCHHHHHHH
T ss_pred EEeC--CHHHHHHHHHHHHHhCCC-EEEeCCccHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHhcCCCHHHHHHH
Confidence 2344 468999999999999964 11100 000000000 0011112222223333 34668999999877663
No 24
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.57 E-value=3.3e-14 Score=137.66 Aligned_cols=196 Identities=16% Similarity=0.196 Sum_probs=130.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc-
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~- 189 (417)
|+||+|||+|+||.++|++|.+. |++|++++|+. ...+...+.|+.. ..+++|+++++|+||+++|+.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~d~~~-~~~~~~~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~ 71 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLVQ-SAVDGLVAAGASA----ARSARDAVQGADVVISMLPASQ 71 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSSH-HHHHHHHHTTCEE----CSSHHHHHTTCSEEEECCSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhC------CCeEEEEcCCH-HHHHHHHHCCCeE----cCCHHHHHhCCCeEEEECCCHH
Confidence 58999999999999999999999 99998887764 4455666678875 678999999999999999865
Q ss_pred hHHHHHH---HHHhcCCCCcEEEEecCchhh---hhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEE
Q 014834 190 AQADNYE---KIFSCMKPNSILGLSHGFLLG---HLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (417)
Q Consensus 190 ~~~~Vl~---eI~~~lk~gaiLi~a~G~~i~---~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~li 263 (417)
...+++. ++.+.++++++|++.+..... .+.+ .....++.++. +|..++... ... |... +
T Consensus 72 ~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~--~~~~~g~~~~~-~pv~~~~~~---~~~-------g~l~-~ 137 (302)
T 2h78_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHA--AARERGLAMLD-APVSGGTAG---AAA-------GTLT-F 137 (302)
T ss_dssp HHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHH--HHHHTTCCEEE-CCEESCHHH---HHH-------TCEE-E
T ss_pred HHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHH--HHHHcCCEEEE-EEccCChhh---Hhc-------CCce-E
Confidence 4567887 799999999998887665432 2222 01123567777 487776541 122 2222 2
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhh-hchHHH----HHHHHHHHHHHcCCCHHHHHHHH
Q 014834 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGIL-LGAVHG----IVESLFRRFTENGMSEDLAYKNT 338 (417)
Q Consensus 264 av~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L-~G~~pA----~iea~~d~~v~~Gl~~e~A~~~~ 338 (417)
.+.. +.+..+.+..++..+|.. ++... ... .+...-+ .+...+ ++.-++..+.+.|+++++.....
T Consensus 138 ~~~g--~~~~~~~~~~ll~~~g~~-~~~~~---~~~---~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 208 (302)
T 2h78_A 138 MVGG--DAEALEKARPLFEAMGRN-IFHAG---PDG---AGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIM 208 (302)
T ss_dssp EEES--CHHHHHHHHHHHHHHEEE-EEEEE---STT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EeCC--CHHHHHHHHHHHHHhCCC-eEEcC---Ccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 2233 578899999999999964 21111 111 1111111 222222 33334556789999998877754
Q ss_pred HH
Q 014834 339 VE 340 (417)
Q Consensus 339 ~q 340 (417)
.+
T Consensus 209 ~~ 210 (302)
T 2h78_A 209 RR 210 (302)
T ss_dssp HT
T ss_pred Hc
Confidence 43
No 25
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.57 E-value=1.7e-14 Score=134.63 Aligned_cols=154 Identities=14% Similarity=0.102 Sum_probs=112.1
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViV-g~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~ 189 (417)
|+||+|||+|+||.++|++|.+. |++|++ ++|+.++..+.+.+.|... ..+..++++++|+||+++|++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~------g~~V~~v~~r~~~~~~~l~~~~g~~~----~~~~~~~~~~aDvVilavp~~ 92 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA------QIPAIIANSRGPASLSSVTDRFGASV----KAVELKDALQADVVILAVPYD 92 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT------TCCEEEECTTCGGGGHHHHHHHTTTE----EECCHHHHTTSSEEEEESCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCCHHHHHHHHHHhCCCc----ccChHHHHhcCCEEEEeCChH
Confidence 48999999999999999999999 998887 6666555555566667654 345566789999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEE-EecCc--------------hhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccc
Q 014834 190 AQADNYEKIFSCMKPNSILG-LSHGF--------------LLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEI 254 (417)
Q Consensus 190 ~~~~Vl~eI~~~lk~gaiLi-~a~G~--------------~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~ 254 (417)
...++++++.+ + ++++|+ .+.|+ ....+.+ .+| +.+|++.+|+.|..... .|...
T Consensus 93 ~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~---~l~-~~~vv~~~~~~~~~v~~----~g~~~ 162 (220)
T 4huj_A 93 SIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSE---LVP-GAKVVKAFNTLPAAVLA----ADPDK 162 (220)
T ss_dssp GHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHH---HST-TCEEEEESCSSCHHHHT----SCSBC
T ss_pred HHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHH---HCC-CCCEEECCCCCCHHHhh----hCccc
Confidence 99999988877 5 577766 55566 3445544 344 56899999999988732 11111
Q ss_pred cCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 255 NGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 255 ~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
.+.+...+++ .. +.++.+.+..|+..+|..
T Consensus 163 ~~~~~~v~~~-g~--~~~~~~~v~~l~~~~G~~ 192 (220)
T 4huj_A 163 GTGSRVLFLS-GN--HSDANRQVAELISSLGFA 192 (220)
T ss_dssp SSCEEEEEEE-ES--CHHHHHHHHHHHHHTTCE
T ss_pred CCCCeeEEEe-CC--CHHHHHHHHHHHHHhCCC
Confidence 1223333333 32 478999999999999964
No 26
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.56 E-value=2.5e-13 Score=131.91 Aligned_cols=217 Identities=13% Similarity=0.094 Sum_probs=140.7
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHH-----------HHcCceecC-------------
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-----------RAAGFTEEN------------- 166 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A-----------~~~G~~~~~------------- 166 (417)
|+||+|||+|+||.++|..|.+. |++|++++++.++ .+.+ .+.|.....
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~------G~~V~~~d~~~~~-~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~ 87 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT------GHTVVLVDQTEDI-LAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLST 87 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHH-HHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHH-HHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhc
Confidence 58999999999999999999999 9999888776432 2222 123321000
Q ss_pred -CCcCCHHhhcCcCCEEEEccCCchH--HHHHHHHHhcCCCCcEEE-EecCchhhhhhhcccCCCCCccEEEeccCCCch
Q 014834 167 -GTLGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGP 242 (417)
Q Consensus 167 -~~~~s~~Ea~~~ADIViLavpd~~~--~~Vl~eI~~~lk~gaiLi-~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~ 242 (417)
....+++|++++||+||+++|+... .+++++|.++++++++|+ .++|+.+..+.. .++..-+++.+||+.|..
T Consensus 88 i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~---~~~~~~~~~g~h~~~P~~ 164 (302)
T 1f0y_A 88 IATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIAN---ATTRQDRFAGLHFFNPVP 164 (302)
T ss_dssp EEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTT
T ss_pred eEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHH---hcCCcccEEEEecCCCcc
Confidence 0145788889999999999998763 468889999999999775 567887766544 233334799999999876
Q ss_pred hHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHHHHHHHHH
Q 014834 243 SVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVESLFR 322 (417)
Q Consensus 243 ~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA~iea~~d 322 (417)
. +..+. +......+.+..+.+..++..+|... +.. . +.. -| +..-.+.+++.-++.
T Consensus 165 ~------------~~~~~--i~~g~~~~~e~~~~~~~l~~~~G~~~-v~~--~-~~~--g~----i~nr~l~~~~~Ea~~ 220 (302)
T 1f0y_A 165 V------------MKLVE--VIKTPMTSQKTFESLVDFSKALGKHP-VSC--K-DTP--GF----IVNRLLVPYLMEAIR 220 (302)
T ss_dssp T------------CCEEE--EECCTTCCHHHHHHHHHHHHHTTCEE-EEE--C-SCT--TT----THHHHHHHHHHHHHH
T ss_pred c------------CceEE--EeCCCCCCHHHHHHHHHHHHHcCCce-EEe--c-Ccc--cc----cHHHHHHHHHHHHHH
Confidence 5 23332 45566678899999999999999642 111 0 111 11 112233445666667
Q ss_pred HHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHhcHHHHHhc
Q 014834 323 RFTENGMSEDLAYKNTVECIT--GIISKIISTQGMLAVYNS 361 (417)
Q Consensus 323 ~~v~~Gl~~e~A~~~~~q~~~--~g~~~li~e~G~~~l~~~ 361 (417)
.+.+.|.++++.........- .|--.+.-..|++.+++.
T Consensus 221 l~~~g~~~~~~id~~~~~g~g~p~GP~~~~D~~Gld~~~~~ 261 (302)
T 1f0y_A 221 LYERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFI 261 (302)
T ss_dssp HHHTTSSCHHHHHHHHHHHHCCSSCHHHHHHHHCHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 777778888775543322110 133445555566554443
No 27
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.56 E-value=4.3e-14 Score=138.78 Aligned_cols=95 Identities=15% Similarity=0.157 Sum_probs=83.3
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-hhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~-s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd 188 (417)
|+||+|||+|+||.++|++|.+. |+ +|++++++. ....+.+.+.|+.. ..+++|++++||+||+++|+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~------G~~~V~~~dr~~~~~~~~~~~~~g~~~----~~~~~e~~~~aDvVi~~vp~ 93 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA------GAIDMAAYDAASAESWRPRAEELGVSC----KASVAEVAGECDVIFSLVTA 93 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH------SCCEEEEECSSCHHHHHHHHHHTTCEE----CSCHHHHHHHCSEEEECSCT
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCCeEEEEcCCCCHHHHHHHHHCCCEE----eCCHHHHHhcCCEEEEecCc
Confidence 48999999999999999999999 99 998888762 45566777889875 67899999999999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEEEecCch
Q 014834 189 AAQADNYEKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiLi~a~G~~ 215 (417)
....++++++.++++++++|++.+++.
T Consensus 94 ~~~~~~~~~l~~~l~~~~ivvd~st~~ 120 (312)
T 3qsg_A 94 QAALEVAQQAGPHLCEGALYADFTSCS 120 (312)
T ss_dssp TTHHHHHHHHGGGCCTTCEEEECCCCC
T ss_pred hhHHHHHHhhHhhcCCCCEEEEcCCCC
Confidence 999999999999999999999887764
No 28
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.56 E-value=1e-13 Score=133.11 Aligned_cols=153 Identities=14% Similarity=0.105 Sum_probs=105.7
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCC--------CcCCHHhhcC---cC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG--------TLGDIYETIS---GS 179 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~--------~~~s~~Ea~~---~A 179 (417)
|+||+|||+|+||.++|.+|.+. |++|++++|+.+ ..+...+.|...... ...+..++.+ ++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG------GNDVTLIDQWPA-HIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQV 75 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC------CCcEEEEECCHH-HHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCC
Confidence 47999999999999999999999 999988877643 344444556543100 0113445444 89
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCCcEEE-EecCchh-hhhhhcccCCCCCccEEE---------eccCCCchhHHHHH
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQSIGLDFPKNIGVIA---------VCPKGMGPSVRRLY 248 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~gaiLi-~a~G~~i-~~~~~~~i~~~~dv~VI~---------v~Pntpg~~vr~ly 248 (417)
|+||+++|+....++++++.++++++++|+ ...|+.. ..+.+ .+++. +++. .+|+.+...
T Consensus 76 d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~---~~~~~-~vi~g~~~~~~~~~~p~~~~~~----- 146 (316)
T 2ew2_A 76 DLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEK---YVPKE-NILVGITMWTAGLEGPGRVKLL----- 146 (316)
T ss_dssp SEEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTT---TSCGG-GEEEEEECCCCEEEETTEEEEC-----
T ss_pred CEEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHH---HcCCc-cEEEEEeeeeeEEcCCCEEEEe-----
Confidence 999999999988999999999999999766 4568765 34433 33433 4553 345443332
Q ss_pred hhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 249 ~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
+.|...+ .+....+.+..+.+..++..+|..
T Consensus 147 -------~~g~~~i-~~~~~~~~~~~~~~~~ll~~~g~~ 177 (316)
T 2ew2_A 147 -------GDGEIEL-ENIDPSGKKFALEVVDVFQKAGLN 177 (316)
T ss_dssp -------SCCCEEE-EESSGGGHHHHHHHHHHHHHTTCC
T ss_pred -------cCCcEEE-eecCCCccHHHHHHHHHHHhCCCC
Confidence 4677774 433334567888999999999965
No 29
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.52 E-value=7.7e-13 Score=137.51 Aligned_cols=229 Identities=13% Similarity=0.131 Sum_probs=149.6
Q ss_pred ccccccccccchHhhhhhcccchhhhcccccccccch-----hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEE
Q 014834 69 PFLLDFETSVFKKDAISLANRDEFIVRGGRDLFKLLP-----DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVV 143 (417)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~e~~vr~g~~~f~~~~-----~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~V 143 (417)
...+||--..-+.-.. ..|..++ +|..|... ..-.-|+||+|||+|.||.+||..|.++ |++|
T Consensus 13 ~~~~~~~~~~~~~~~~----~a~~~~~--~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~a------G~~V 80 (460)
T 3k6j_A 13 GENLYFQGSEVRSYLM----EAHSLAG--QWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLA------GIET 80 (460)
T ss_dssp SGGGGGCBCHHHHHHH----HTTCCTT--SCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHT------TCEE
T ss_pred ccchhhhhHHHHHHHH----hHHHhhc--cccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHC------CCeE
Confidence 3445655544442221 1444444 68777321 1223358999999999999999999999 9999
Q ss_pred EEEecCChhh-------HHHHHHcCceec-------C--CCcCCHHhhcCcCCEEEEccCCchH--HHHHHHHHhcCCCC
Q 014834 144 KVGLRKGSRS-------FAEARAAGFTEE-------N--GTLGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPN 205 (417)
Q Consensus 144 iVg~r~~s~s-------~~~A~~~G~~~~-------~--~~~~s~~Ea~~~ADIViLavpd~~~--~~Vl~eI~~~lk~g 205 (417)
++++++.++. .+.+.+.|.... + ....++ +++++||+||+++|.... .+++.+|.+.++++
T Consensus 81 ~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl-~al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~ 159 (460)
T 3k6j_A 81 FLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF-HKLSNCDLIVESVIEDMKLKKELFANLENICKST 159 (460)
T ss_dssp EEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG-GGCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTT
T ss_pred EEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH-HHHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCC
Confidence 9888764421 223444453200 0 013456 478999999999997653 46889999999999
Q ss_pred cEEE-EecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHh
Q 014834 206 SILG-LSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL 284 (417)
Q Consensus 206 aiLi-~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~al 284 (417)
++|+ .++++++..+.+ .++...+++.+||..|...+ .. .-+.+....+.+..+.+..++..+
T Consensus 160 aIlasnTSsl~i~~ia~---~~~~p~r~iG~HffnPv~~m-------------~L-vEIv~g~~Ts~e~~~~~~~l~~~l 222 (460)
T 3k6j_A 160 CIFGTNTSSLDLNEISS---VLRDPSNLVGIHFFNPANVI-------------RL-VEIIYGSHTSSQAIATAFQACESI 222 (460)
T ss_dssp CEEEECCSSSCHHHHHT---TSSSGGGEEEEECCSSTTTC-------------CE-EEEECCSSCCHHHHHHHHHHHHHT
T ss_pred CEEEecCCChhHHHHHH---hccCCcceEEEEecchhhhC-------------CE-EEEEeCCCCCHHHHHHHHHHHHHh
Confidence 9885 677888876654 33344589999999987651 12 224556677889999999999999
Q ss_pred CCCceeccchhhhhhhhccccchhhhc-hHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 014834 285 GSPFTFATTLEQEYKSDIFGERGILLG-AVHGIVESLFRRFTENGMSEDLAYKNT 338 (417)
Q Consensus 285 G~~~~iettf~~e~~~dl~ge~t~L~G-~~pA~iea~~d~~v~~Gl~~e~A~~~~ 338 (417)
|...+. . . +. ..-+++ .+.+++..++..+.+.|.++++..+..
T Consensus 223 Gk~~v~-v--~-d~-------pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~ 266 (460)
T 3k6j_A 223 KKLPVL-V--G-NC-------KSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKII 266 (460)
T ss_dssp TCEEEE-E--S-SC-------CHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred CCEEEE-E--e-cc-------cHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 975211 1 0 11 112333 333355555556668999998877654
No 30
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.52 E-value=2.8e-13 Score=129.33 Aligned_cols=153 Identities=13% Similarity=0.041 Sum_probs=110.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCchH
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~~ 191 (417)
+||+|||+|+||.++|++|++. |++|+.+++. ++ +++|| |+++|+...
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~------G~~V~~~~~~-----------------------~~-~~~aD--ilavP~~ai 54 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSV------GHYVTVLHAP-----------------------ED-IRDFE--LVVIDAHGV 54 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHT------TCEEEECSSG-----------------------GG-GGGCS--EEEECSSCH
T ss_pred cEEEEEeeCHHHHHHHHHHHHC------CCEEEEecCH-----------------------HH-hccCC--EEEEcHHHH
Confidence 7999999999999999999999 9988765541 12 46789 999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCc-hhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecCCCC
Q 014834 192 ADNYEKIFSCMKPNSILGLSHGF-LLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD 270 (417)
Q Consensus 192 ~~Vl~eI~~~lk~gaiLi~a~G~-~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~dvs 270 (417)
.++++++.+++++|++|++++|. +...+.. ..+.+..++..||.. |.+..++.. +
T Consensus 55 ~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~---~~~~g~~fvg~HPm~------------------g~~~~i~a~---d 110 (232)
T 3dfu_A 55 EGYVEKLSAFARRGQMFLHTSLTHGITVMDP---LETSGGIVMSAHPIG------------------QDRWVASAL---D 110 (232)
T ss_dssp HHHHHHHHTTCCTTCEEEECCSSCCGGGGHH---HHHTTCEEEEEEEEE------------------TTEEEEEES---S
T ss_pred HHHHHHHHHhcCCCCEEEEECCcCHHHHHHH---HHhCCCcEEEeeeCC------------------CCceeeeCC---C
Confidence 99999999999999999987664 3332222 113457899999942 234434432 5
Q ss_pred HHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHHHHHHHHHHH
Q 014834 271 GRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVESLFRRF 324 (417)
Q Consensus 271 gea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA~iea~~d~~ 324 (417)
.++.+.+..|+..+|+. ++..+ ...-|.|++.+..+..+.+++..+.+.+
T Consensus 111 ~~a~~~l~~L~~~lG~~-vv~~~---~~~hd~~~AAvsh~nhLv~L~~~A~~ll 160 (232)
T 3dfu_A 111 ELGETIVGLLVGELGGS-IVEIA---DDKRAQLAAALTYAGFLSTLQRDASYFL 160 (232)
T ss_dssp HHHHHHHHHHHHHTTCE-ECCCC---GGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCE-EEEeC---HHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999974 33332 3345667666555556666666666655
No 31
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.51 E-value=1.3e-13 Score=132.81 Aligned_cols=197 Identities=17% Similarity=0.143 Sum_probs=129.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCC-ch
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD-AA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd-~~ 190 (417)
+||+|||+|+||.++|++|.+. |++|++++|+.++ .+...+.|+.. ..+++|+++++|+||+++|+ ..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~~ 70 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA------GCSVTIWNRSPEK-AEELAALGAER----AATPCEVVESCPVTFAMLADPAA 70 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGGG-GHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCeEEEEcCCHHH-HHHHHHCCCee----cCCHHHHHhcCCEEEEEcCCHHH
Confidence 7999999999999999999999 9999888776544 45556678875 67899999999999999995 56
Q ss_pred HHHHH---HHHHhcCCCCcEEEEecCchhhhhhhcccCC-CCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeec
Q 014834 191 QADNY---EKIFSCMKPNSILGLSHGFLLGHLQSIGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (417)
Q Consensus 191 ~~~Vl---~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~-~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~ 266 (417)
..+++ +++.+.+++|++|++.++............+ ..++.++. +|-..+... ... |-..+++ .
T Consensus 71 ~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~---a~~-------g~l~~~~-g 138 (287)
T 3pef_A 71 AEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE-APVSGSKKP---AED-------GTLIILA-A 138 (287)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHH---HHH-------TCEEEEE-E
T ss_pred HHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHH---Hhc-------CCEEEEE-e
Confidence 67888 7899999999999988876543211100011 23456665 674433331 122 2333233 3
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhh-hchHHH----HHHHHHHHHHHcCCCHHHHHHHHHH
Q 014834 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGIL-LGAVHG----IVESLFRRFTENGMSEDLAYKNTVE 340 (417)
Q Consensus 267 ~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L-~G~~pA----~iea~~d~~v~~Gl~~e~A~~~~~q 340 (417)
. +.+..+.+..++..+|.. ++... .... +...-+ .+...+ ++.-++..+.+.|+++++.+.....
T Consensus 139 g--~~~~~~~~~~ll~~~g~~-~~~~g---~~g~---~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~ 208 (287)
T 3pef_A 139 G--DRNLYDEAMPGFEKMGKK-IIHLG---DVGK---GAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGA 208 (287)
T ss_dssp E--CHHHHHHHHHHHHHHEEE-EEECS---STTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHhCCC-eEEeC---CCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 3 467889999999999964 22111 0110 111111 222222 3333556678999999988876554
No 32
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.50 E-value=1.5e-13 Score=132.36 Aligned_cols=198 Identities=17% Similarity=0.101 Sum_probs=127.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc-
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~- 189 (417)
|+||+|||+|+||.++|++|.+. |++|++++|+.++ .+...+.|+.. ..+++|++++||+||+++|+.
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~----~~~~~~~~~~advvi~~v~~~~ 69 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA------GFDVTVWNRNPAK-CAPLVALGARQ----ASSPAEVCAACDITIAMLADPA 69 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH------TCCEEEECSSGGG-GHHHHHHTCEE----CSCHHHHHHHCSEEEECCSSHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHC------CCeEEEEcCCHHH-HHHHHHCCCee----cCCHHHHHHcCCEEEEEcCCHH
Confidence 68999999999999999999999 9999888877554 44455568775 678999999999999999987
Q ss_pred hHHHHH---HHHHhcCCCCcEEEEecCchhhhhhhcccCC-CCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEee
Q 014834 190 AQADNY---EKIFSCMKPNSILGLSHGFLLGHLQSIGLDF-PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (417)
Q Consensus 190 ~~~~Vl---~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~-~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav 265 (417)
...+++ +++.+.+++|++|++++.............+ ..++.++.. |...+.. .... |...+++
T Consensus 70 ~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~---~a~~-------g~l~~~~- 137 (287)
T 3pdu_A 70 AAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEA-PVSGTKK---PAED-------GTLIILA- 137 (287)
T ss_dssp HHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC-CEECCHH---HHHH-------TCEEEEE-
T ss_pred HHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEC-CccCCHH---HHhc-------CCEEEEE-
Confidence 556788 7788999999999988776432211100011 134556543 5322221 1122 3333232
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhh-hchHHH----HHHHHHHHHHHcCCCHHHHHHHHHH
Q 014834 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGIL-LGAVHG----IVESLFRRFTENGMSEDLAYKNTVE 340 (417)
Q Consensus 266 ~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L-~G~~pA----~iea~~d~~v~~Gl~~e~A~~~~~q 340 (417)
.. +.+..+.+..++..+|.. ++... ... -+...-+ .+...+ ++.-++..+.+.|+++++.+....+
T Consensus 138 gg--~~~~~~~~~~ll~~~g~~-~~~~g---~~g---~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~ 208 (287)
T 3pdu_A 138 AG--DQSLFTDAGPAFAALGKK-CLHLG---EVG---QGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDA 208 (287)
T ss_dssp EE--CHHHHHHTHHHHHHHEEE-EEECS---STT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred eC--CHHHHHHHHHHHHHhCCC-EEEcC---CCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 33 467889999999999963 21110 000 0111111 222222 2333455678999999998886665
No 33
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.50 E-value=2.2e-13 Score=133.31 Aligned_cols=198 Identities=16% Similarity=0.066 Sum_probs=127.7
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc-
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~- 189 (417)
|+||+|||+|+||.++|++|.+. |++|++++|+.++ .+...+.|+.. ..+++|++++||+||+++|+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~~-~~~l~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~ 89 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN------GFKVTVWNRTLSK-CDELVEHGASV----CESPAEVIKKCKYTIAMLSDPC 89 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGGG-GHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHHCCCeE----cCCHHHHHHhCCEEEEEcCCHH
Confidence 48999999999999999999999 9999888877544 44555778875 678999999999999999975
Q ss_pred hHHHHH---HHHHhcCCCCcEEEEecCchhhhhhhcc-cCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEee
Q 014834 190 AQADNY---EKIFSCMKPNSILGLSHGFLLGHLQSIG-LDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (417)
Q Consensus 190 ~~~~Vl---~eI~~~lk~gaiLi~a~G~~i~~~~~~~-i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav 265 (417)
...+++ +++.+.+++|++|+++++.......... .....++.++. +|-..+.. .-.. |...+++
T Consensus 90 ~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~---~a~~-------g~l~i~~- 157 (310)
T 3doj_A 90 AALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE-GPVSGSKK---PAED-------GQLIILA- 157 (310)
T ss_dssp HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHH---HHHH-------TCEEEEE-
T ss_pred HHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChh---HHhc-------CCeEEEE-
Confidence 456788 6788999999999988876432211100 01123456655 56332222 1122 3333333
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhh-hchHH----HHHHHHHHHHHHcCCCHHHHHHHHHH
Q 014834 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGIL-LGAVH----GIVESLFRRFTENGMSEDLAYKNTVE 340 (417)
Q Consensus 266 ~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L-~G~~p----A~iea~~d~~v~~Gl~~e~A~~~~~q 340 (417)
.. +.+..+.+..++..+|.. ++... ... -+...-+ .+... +++.-++..+.+.|+++++.+.....
T Consensus 158 gg--~~~~~~~~~~ll~~~g~~-~~~~g---~~g---~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~ 228 (310)
T 3doj_A 158 AG--DKALFEESIPAFDVLGKR-SFYLG---QVG---NGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDL 228 (310)
T ss_dssp EE--CHHHHHHHHHHHHHHEEE-EEECS---STT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred cC--CHHHHHHHHHHHHHhCCC-EEEeC---CcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 33 368899999999999964 21111 001 0111111 12222 12333455678999999988775543
No 34
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.48 E-value=4.4e-13 Score=130.47 Aligned_cols=200 Identities=16% Similarity=0.134 Sum_probs=126.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch-
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~- 190 (417)
+||+|||+|+||.++|++|.+. |++|++++|+.+ ..+...+.|... ...+++|++++||+||+++|+..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~-~~~~~~~~g~~~---~~~~~~e~~~~aDvvi~~vp~~~~ 77 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA------GLSTWGADLNPQ-ACANLLAEGACG---AAASAREFAGVVDALVILVVNAAQ 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHHTTCSE---EESSSTTTTTTCSEEEECCSSHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCeEEEEECCHH-HHHHHHHcCCcc---ccCCHHHHHhcCCEEEEECCCHHH
Confidence 6899999999999999999999 999988877643 445555667642 03578899999999999999864
Q ss_pred HHHHH---HHHHhcCCCCcEEEEecCchhhh---hhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEe
Q 014834 191 QADNY---EKIFSCMKPNSILGLSHGFLLGH---LQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 191 ~~~Vl---~eI~~~lk~gaiLi~a~G~~i~~---~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~lia 264 (417)
...++ +++.+.+++|++|++.+...... +.+ .....++.++. +|-..+... -. .|...+++
T Consensus 78 ~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~~---a~-------~g~l~~~~ 144 (303)
T 3g0o_A 78 VRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAA--ALTALNLNMLD-APVSGGAVK---AA-------QGEMTVMA 144 (303)
T ss_dssp HHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHH--HHHTTTCEEEE-CCEESCHHH---HH-------TTCEEEEE
T ss_pred HHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHH--HHHHcCCeEEe-CCCCCChhh---hh-------cCCeEEEe
Confidence 55676 67889999999999888764322 211 01123566766 774433331 12 34434333
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCceeccc--hhhhhhhhccccchhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 014834 265 VHQDVDGRATNVALGWSVALGSPFTFATT--LEQEYKSDIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYKNTVE 340 (417)
Q Consensus 265 v~~dvsgea~e~a~~L~~alG~~~~iett--f~~e~~~dl~ge~t~L~G~~pA~iea~~d~~v~~Gl~~e~A~~~~~q 340 (417)
.. +.+..+.+..++..+|.. ++... ...-.... +-... +.+...+++.-++..+.+.|+++++.+....+
T Consensus 145 -gg--~~~~~~~~~~ll~~~g~~-~~~~~~~~g~a~~~K-l~~N~-~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~ 216 (303)
T 3g0o_A 145 -SG--SEAAFTRLKPVLDAVASN-VYRISDTPGAGSTVK-IIHQL-LAGVHIAAAAEAMALAARAGIPLDVMYDVVTH 216 (303)
T ss_dssp -EC--CHHHHHHHHHHHHHHEEE-EEEEESSTTHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTT
T ss_pred -CC--CHHHHHHHHHHHHHHCCC-EEECCCCCcHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 33 468899999999999964 22111 00000000 10111 11111222333455778999999988876544
No 35
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.48 E-value=2.5e-13 Score=132.29 Aligned_cols=199 Identities=16% Similarity=0.099 Sum_probs=127.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccC-Cch
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS-DAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavp-d~~ 190 (417)
+||+|||+|+||.++|.+|.+. |++|.+++++.++ .+...+.|+.. ..+.+++++++|+||+++| +..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~------g~~V~~~~~~~~~-~~~~~~~g~~~----~~~~~~~~~~~DvVi~av~~~~~ 99 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM------GHTVTVWNRTAEK-CDLFIQEGARL----GRTPAEVVSTCDITFACVSDPKA 99 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSGGG-GHHHHHTTCEE----CSCHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhC------CCEEEEEeCCHHH-HHHHHHcCCEE----cCCHHHHHhcCCEEEEeCCCHHH
Confidence 7899999999999999999998 9999888776544 34445578765 5678899999999999999 566
Q ss_pred HHHHHHH---HHhcCCCCcEEEEecCchh---hhhhhcccCC-CCCccEEEe-ccCCCchhHHHHHhhcccccCCCceEE
Q 014834 191 QADNYEK---IFSCMKPNSILGLSHGFLL---GHLQSIGLDF-PKNIGVIAV-CPKGMGPSVRRLYVQGKEINGAGINSS 262 (417)
Q Consensus 191 ~~~Vl~e---I~~~lk~gaiLi~a~G~~i---~~~~~~~i~~-~~dv~VI~v-~Pntpg~~vr~ly~~G~~~~G~Gv~~l 262 (417)
..+++.+ +.+.++++++|++++.... ..+.+ .+ ..++.++.. ++++|... . .|...+
T Consensus 100 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~---~~~~~~~~~v~~p~~g~~~~~-----~-------~g~~~~ 164 (316)
T 2uyy_A 100 AKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQ---VIVSRGGRFLEAPVSGNQQLS-----N-------DGMLVI 164 (316)
T ss_dssp HHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHH---HHHHTTCEEEECCEESCHHHH-----H-------HTCEEE
T ss_pred HHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCEEEEcCccCChhHH-----h-------hCCEEE
Confidence 6778775 3478899998887766542 22222 11 124556542 22222221 1 344443
Q ss_pred EeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHH-HHHHHHHHHHHcCCCHHHHHHHHHHH
Q 014834 263 FAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG-IVESLFRRFTENGMSEDLAYKNTVEC 341 (417)
Q Consensus 263 iav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA-~iea~~d~~v~~Gl~~e~A~~~~~q~ 341 (417)
+. .. +.+..+.+..++..+|....+.... +...........++++..+ +.|++. .+++.|+++++++..+.++
T Consensus 165 ~~-~g--~~~~~~~v~~ll~~~g~~~~~~~~~--~~~~~~K~~~n~~~~~~~~~~~Ea~~-la~~~G~~~~~~~~~~~~~ 238 (316)
T 2uyy_A 165 LA-AG--DRGLYEDCSSCFQAMGKTSFFLGEV--GNAAKMMLIVNMVQGSFMATIAEGLT-LAQVTGQSQQTLLDILNQG 238 (316)
T ss_dssp EE-EE--CHHHHHHTHHHHHHHEEEEEECSST--THHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHHHHHS
T ss_pred Ee-CC--CHHHHHHHHHHHHHhcCCEEEeCCC--CHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHcC
Confidence 33 33 4678888999999999642111110 1011111122345555444 455544 4899999999988877665
Q ss_pred H
Q 014834 342 I 342 (417)
Q Consensus 342 ~ 342 (417)
.
T Consensus 239 ~ 239 (316)
T 2uyy_A 239 Q 239 (316)
T ss_dssp T
T ss_pred C
Confidence 4
No 36
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.48 E-value=1.8e-13 Score=131.44 Aligned_cols=202 Identities=16% Similarity=0.060 Sum_probs=122.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc-h
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~-~ 190 (417)
+||+|||+|+||.+++.+|.+. |++|++++|+.++ .+...+.|+.. ..+++++++++|+||+++|+. .
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~V~~~~~~~~~-~~~~~~~g~~~----~~~~~~~~~~~Dvvi~~vp~~~~ 69 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH------GYPLIIYDVFPDA-CKEFQDAGEQV----VSSPADVAEKADRIITMLPTSIN 69 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT------TCCEEEECSSTHH-HHHHHTTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHHHcCCee----cCCHHHHHhcCCEEEEeCCCHHH
Confidence 4799999999999999999998 9999888776443 44555668765 568889999999999999765 4
Q ss_pred HHHHHHH---HHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecC
Q 014834 191 QADNYEK---IFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (417)
Q Consensus 191 ~~~Vl~e---I~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~ 267 (417)
..+++.+ +.+.+++|++|+..+|+...........+++. .+.+|++|...-...... |...++ +..
T Consensus 70 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~---g~~~~~~p~~~g~~~a~~-------~~~~~~-~~~ 138 (296)
T 2gf2_A 70 AIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKM---GAVFMDAPVSGGVGAARS-------GNLTFM-VGG 138 (296)
T ss_dssp HHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHT---TCEEEECCEESHHHHHHH-------TCEEEE-EES
T ss_pred HHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHc---CCEEEEcCCCCChhHHhc-------CcEEEE-eCC
Confidence 5677775 45678999988888888654332100011111 122345554332222222 343432 333
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 014834 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYKNTV 339 (417)
Q Consensus 268 dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA~iea~~d~~v~~Gl~~e~A~~~~~ 339 (417)
+.+..+.+..++..+|.. ++.+.....-..--+............+.|++. .+.+.|+++++++....
T Consensus 139 --~~~~~~~v~~l~~~~g~~-~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~-~~~~~G~~~~~~~~~~~ 206 (296)
T 2gf2_A 139 --VEDEFAAAQELLGCMGSN-VVYCGAVGTGQAAKICNNMLLAISMIGTAEAMN-LGIRLGLDPKLLAKILN 206 (296)
T ss_dssp --CGGGHHHHHHHHTTTEEE-EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHcCC-eEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHH
Confidence 467889999999999963 111110000000000000001111122445544 78999999988777544
No 37
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.48 E-value=6.8e-13 Score=138.55 Aligned_cols=213 Identities=11% Similarity=0.128 Sum_probs=141.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH-----------cCceecC---------CCcC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEEN---------GTLG 170 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~-----------~G~~~~~---------~~~~ 170 (417)
++||+|||+|+||.+||.+|.++ |++|++++++.+ ..+.+.+ .|..... ....
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a------G~~V~l~D~~~e-~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH------GHQVLLYDISAE-ALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVT 77 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHH-HHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC------CCeEEEEECCHH-HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeC
Confidence 37999999999999999999999 999988877643 3333322 3321000 0134
Q ss_pred CHHhhcCcCCEEEEccCCchH--HHHHHHHHhcCCCCcEE-EEecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHH
Q 014834 171 DIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSIL-GLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRL 247 (417)
Q Consensus 171 s~~Ea~~~ADIViLavpd~~~--~~Vl~eI~~~lk~gaiL-i~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~l 247 (417)
++ +++++||+||+++|+... .+++.++.+.++++++| +.++++++..+.. .++...+++.+||..|.+..
T Consensus 78 ~~-~~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~---~~~~p~~~ig~hf~~Pa~v~--- 150 (483)
T 3mog_A 78 DI-HALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAA---EIKNPERVAGLHFFNPAPVM--- 150 (483)
T ss_dssp CG-GGGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTT---TSSSGGGEEEEEECSSTTTC---
T ss_pred CH-HHhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHH---HccCccceEEeeecChhhhC---
Confidence 55 468999999999998854 47899999999999988 5788998876654 33344589999999998872
Q ss_pred HhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhc-hHHHHHHHHHHHHHH
Q 014834 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLG-AVHGIVESLFRRFTE 326 (417)
Q Consensus 248 y~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G-~~pA~iea~~d~~v~ 326 (417)
...- ++.....+.+..+.+..++..+|...+ .. .+.. +-+++ .+.+++..++..+.+
T Consensus 151 ----------~Lve-vv~g~~Ts~e~~~~~~~l~~~lGk~~v-~v---~d~~-------Gfi~Nr~l~~~~~Ea~~l~~~ 208 (483)
T 3mog_A 151 ----------KLVE-VVSGLATAAEVVEQLCELTLSWGKQPV-RC---HSTP-------GFIVNRVARPYYSEAWRALEE 208 (483)
T ss_dssp ----------CEEE-EEECSSCCHHHHHHHHHHHHHTTCEEE-EE---ESCT-------TTTHHHHTHHHHHHHHHHHHT
T ss_pred ----------CeEE-EecCCCCCHHHHHHHHHHHHHhCCEEE-EE---eccC-------cchHHHHHHHHHHHHHHHHHh
Confidence 1333 555777888999999999999997421 11 0111 12322 333355566667777
Q ss_pred cCCCHHHHHHHHHHHH--HHHHHHHHHHhcHHHHH
Q 014834 327 NGMSEDLAYKNTVECI--TGIISKIISTQGMLAVY 359 (417)
Q Consensus 327 ~Gl~~e~A~~~~~q~~--~~g~~~li~e~G~~~l~ 359 (417)
.|.++++..+..-... .-|--.++-..|++..+
T Consensus 209 g~~~~~~id~a~~~~~G~p~GP~~l~D~~Gld~~~ 243 (483)
T 3mog_A 209 QVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVNF 243 (483)
T ss_dssp TCSCHHHHHHHHHHTTCCSSCHHHHHHHHCHHHHH
T ss_pred CCCCHHHHHHHHHhcCCCCCCHHHHHHHhchHHHH
Confidence 7788877665332210 01334455555664433
No 38
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.47 E-value=1.6e-13 Score=134.51 Aligned_cols=198 Identities=14% Similarity=0.131 Sum_probs=118.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCchH
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~~ 191 (417)
+||||||+|+||.+||+||.++ |++|++++|+.++ .+...+.|... +.++.|+++++|+||+++|+..+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~------G~~V~v~dr~~~~-~~~l~~~G~~~----~~s~~e~~~~~dvvi~~l~~~~~ 74 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA------GYELVVWNRTASK-AEPLTKLGATV----VENAIDAITPGGIVFSVLADDAA 74 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEC--------CTTTTTTCEE----CSSGGGGCCTTCEEEECCSSHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHHcCCeE----eCCHHHHHhcCCceeeeccchhh
Confidence 5899999999999999999999 9999988887544 34445678876 68999999999999999998776
Q ss_pred H-HHH-HHHHhcCCCCcEEEEecCchhhhhhhc-ccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecCC
Q 014834 192 A-DNY-EKIFSCMKPNSILGLSHGFLLGHLQSI-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQD 268 (417)
Q Consensus 192 ~-~Vl-~eI~~~lk~gaiLi~a~G~~i~~~~~~-~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~d 268 (417)
. +++ .++.+.+++|+++++.+-.......+. ...-..++.++- +|-.-+.. .-+. |-.. +.+..
T Consensus 75 ~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ld-apVsGg~~---~a~~-------g~l~-im~gG- 141 (297)
T 4gbj_A 75 VEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVG-APIFARPE---AVRA-------KVGN-ICLSG- 141 (297)
T ss_dssp HHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHH---HHHH-------TCCE-EEEEE-
T ss_pred HHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceec-CCcCCCcc---cccc-------ccce-eeccc-
Confidence 4 454 468889999999998876643211110 011123555553 33221111 1112 2222 22233
Q ss_pred CCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhc-hH-HHHHHH---HHHHHHHcCCCHHHHHHHHHH
Q 014834 269 VDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLG-AV-HGIVES---LFRRFTENGMSEDLAYKNTVE 340 (417)
Q Consensus 269 vsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G-~~-pA~iea---~~d~~v~~Gl~~e~A~~~~~q 340 (417)
+.++.+.++.++..+|.. ++..- ...- -+...=+++ .+ -..+.+ ++..+.+.|++++..+....+
T Consensus 142 -~~~~~~~~~~~l~~~g~~-i~~~g--~~~G---~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~ 211 (297)
T 4gbj_A 142 -NAGAKERIKPIVENFVKG-VFDFG--DDPG---AANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTS 211 (297)
T ss_dssp -CHHHHHHHHHHHHTTCSE-EEECC--SCTT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred -chhHHHHHHHHHHHhhCC-eEEec--CCcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 458899999999999964 11100 0000 011111111 11 112333 344578999999988775443
No 39
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.46 E-value=1.5e-12 Score=127.30 Aligned_cols=199 Identities=15% Similarity=0.052 Sum_probs=125.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch-
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~- 190 (417)
+||+|||+|+||.++|++|++. |++|++++|+.+ ..+.+.+.|... ..+++|++++||+||+++|+..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~-~~~~~~~~g~~~----~~~~~e~~~~aDvVi~~vp~~~~ 78 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ------GKRVAIWNRSPG-KAAALVAAGAHL----CESVKAALSASPATIFVLLDNHA 78 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHH-HHHHHHHHTCEE----CSSHHHHHHHSSEEEECCSSHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHCCCee----cCCHHHHHhcCCEEEEEeCCHHH
Confidence 8999999999999999999999 999988877644 345555568775 6789999999999999999876
Q ss_pred HHHHHH--HHHhcCCCCcEEEEecCchhhhhhhc-ccCCCCCccEEEeccCCCchhHHHHHhhcccccCC-CceEEEeec
Q 014834 191 QADNYE--KIFSCMKPNSILGLSHGFLLGHLQSI-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGA-GINSSFAVH 266 (417)
Q Consensus 191 ~~~Vl~--eI~~~lk~gaiLi~a~G~~i~~~~~~-~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~-Gv~~liav~ 266 (417)
..+++. .+.+ +++|++|++++.......... ....+.++.++.. |-..++.. . |. +... + +.
T Consensus 79 ~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vda-pv~g~~~~-----~-----~~~~~~i-~-~g 144 (306)
T 3l6d_A 79 THEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKG-MIVAYPRN-----V-----GHRESHS-I-HT 144 (306)
T ss_dssp HHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEE-EEESCGGG-----T-----TCTTCEE-E-EE
T ss_pred HHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec-ccccCccc-----c-----cCCceEE-E-Ec
Confidence 567776 5644 579999998887643211110 0011235666653 53322210 1 12 2333 2 23
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceeccchhhhhhh-hccccchhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 014834 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYKS-DIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYKNTVEC 341 (417)
Q Consensus 267 ~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~-dl~ge~t~L~G~~pA~iea~~d~~v~~Gl~~e~A~~~~~q~ 341 (417)
. +.++.+.++.++..+|+. ++....-+.... .++. .++.+...++.| ++..+.+.|++++..+....+.
T Consensus 145 g--~~~~~~~~~~ll~~lg~~-~~~~~~g~~~g~g~~~k--~~~~~~~~~~~E-a~~la~~~Gld~~~~~~~~~~~ 214 (306)
T 3l6d_A 145 G--DREAFEQHRALLEGLAGH-TVFLPWDEALAFATVLH--AHAFAAMVTFFE-AVGAGDRFGLPVSKTARLLLET 214 (306)
T ss_dssp E--CHHHHHHHHHHHHTTCSE-EEECCHHHHHHHHHHHH--HHHHHHHHHHHH-HHHHHHHTTCCHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHhcCC-EEEecCCCCccHHHHHH--HHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHh
Confidence 3 468899999999999763 322200000010 0111 222222333334 4456789999999998876664
No 40
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.45 E-value=1.3e-13 Score=126.25 Aligned_cols=176 Identities=13% Similarity=0.083 Sum_probs=122.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC-------ceecCCCcCCHHhhcCcCCEEE
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-------FTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G-------~~~~~~~~~s~~Ea~~~ADIVi 183 (417)
+||+||| +|.||.+++..|.+. |++|.+.+|+.++..+.....| +. ..+.+++++++|+||
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~Vi 69 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL------GHEIVVGSRREEKAEAKAAEYRRIAGDASIT-----GMKNEDAAEACDIAV 69 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT------TCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-----EEEHHHHHHHCSEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHhccccccCCCC-----hhhHHHHHhcCCEEE
Confidence 4899999 999999999999998 9999888876444333333223 22 246778899999999
Q ss_pred EccCCchHHHHHHHHHhcCCCCcEEE-EecCch--------------hhhhhhcccCCCCCccEEEeccCCCchhHHHHH
Q 014834 184 LLISDAAQADNYEKIFSCMKPNSILG-LSHGFL--------------LGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (417)
Q Consensus 184 Lavpd~~~~~Vl~eI~~~lk~gaiLi-~a~G~~--------------i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly 248 (417)
+++|+....++++++.+.++ +++|+ .+.|+. ...+.+ .+| +..++..||+.|+.......
T Consensus 70 ~~~~~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~---~~~-~~~~v~~~~~~~~~~~~~~~ 144 (212)
T 1jay_A 70 LTIPWEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAE---VLE-SEKVVSALHTIPAARFANLD 144 (212)
T ss_dssp ECSCHHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHH---HHT-CSCEEECCTTCCHHHHHCTT
T ss_pred EeCChhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHH---hCC-CCeEEEEccchHHHHhhCcC
Confidence 99999888889988888774 77766 556676 344443 333 36899999999988732111
Q ss_pred hhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHh-CCCceeccchhhhhhhhccccchhhhchHHHHHHHHH
Q 014834 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYKSDIFGERGILLGAVHGIVESLF 321 (417)
Q Consensus 249 ~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~al-G~~~~iettf~~e~~~dl~ge~t~L~G~~pA~iea~~ 321 (417)
. ...+.. ++... +.++.+.+..++..+ |.. .+. .. -.+....+-++.|+++...+
T Consensus 145 --~----~~~~~~-~~~g~--~~~~~~~v~~l~~~~~G~~-~~~------~~--~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 145 --E----KFDWDV-PVCGD--DDESKKVVMSLISEIDGLR-PLD------AG--PLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp --C----CCCEEE-EEEES--CHHHHHHHHHHHHHSTTEE-EEE------EE--SGGGHHHHHTHHHHHHHHHH
T ss_pred --C----CCCccE-EEECC--cHHHHHHHHHHHHHcCCCC-cee------cc--chhHHHHhcchHHHHHHHHH
Confidence 1 112443 44333 578899999999999 863 111 11 14566677888888777665
No 41
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.45 E-value=7.5e-12 Score=123.02 Aligned_cols=201 Identities=13% Similarity=0.073 Sum_probs=133.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc-------CceecCCCcCCHHhhcCcCCEEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------GFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~-------G~~~~~~~~~s~~Ea~~~ADIViL 184 (417)
|||||||+|.||.+||++|. . |++|++++++.+ ..+.+.+. ++.. ..++++ +++||+||.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a------G~~V~v~d~~~~-~~~~~~~~l~~~~~~~i~~----~~~~~~-~~~aDlVie 79 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S------KHEVVLQDVSEK-ALEAAREQIPEELLSKIEF----TTTLEK-VKDCDIVME 79 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCHH-HHHHHHHHSCGGGGGGEEE----ESSCTT-GGGCSEEEE
T ss_pred CeEEEEeeCHHHHHHHHHHH-c------CCEEEEEECCHH-HHHHHHHHHHHHHhCCeEE----eCCHHH-HcCCCEEEE
Confidence 89999999999999999999 9 999998887643 45555555 5553 456666 889999999
Q ss_pred ccCCchH--HHHHHHHHhcCCCCcEEE-EecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceE
Q 014834 185 LISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (417)
Q Consensus 185 avpd~~~--~~Vl~eI~~~lk~gaiLi-~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~ 261 (417)
++|+... ..++.++.+. |+++|+ .++++++..+.+ ......+++.+||-.|... +-..
T Consensus 80 avpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~---~~~~~~r~~G~Hf~~Pv~~--------------~~lv 140 (293)
T 1zej_A 80 AVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAE---RLDSPSRFLGVHWMNPPHV--------------MPLV 140 (293)
T ss_dssp CCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTTT--------------CCEE
T ss_pred cCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHH---HhhcccceEeEEecCcccc--------------CCEE
Confidence 9998875 3577777665 898875 677887765543 2223347999999777543 2233
Q ss_pred EEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhc-h-HHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 014834 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLG-A-VHGIVESLFRRFTENGMSEDLAYKNTV 339 (417)
Q Consensus 262 liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G-~-~pA~iea~~d~~v~~Gl~~e~A~~~~~ 339 (417)
-+.+....+.+..+.+..++..+|... +.. .+. | +++ . .+.+.|++ ..+.+ |+++++......
T Consensus 141 eiv~g~~t~~~~~~~~~~l~~~lGk~~-v~v---~d~----f-----i~Nrll~~~~~EA~-~l~~~-Gv~~e~id~~~~ 205 (293)
T 1zej_A 141 EIVISRFTDSKTVAFVEGFLRELGKEV-VVC---KGQ----S-----LVNRFNAAVLSEAS-RMIEE-GVRAEDVDRVWK 205 (293)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHTTCEE-EEE---ESS----C-----HHHHHHHHHHHHHH-HHHHH-TCCHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHcCCeE-EEe---ccc----c-----cHHHHHHHHHHHHH-HHHHh-CCCHHHHHHHHH
Confidence 355666678899999999999999642 111 011 1 222 1 22344443 34444 998887666443
Q ss_pred HHHH--H---HHHHHHHHhcHHHHH
Q 014834 340 ECIT--G---IISKIISTQGMLAVY 359 (417)
Q Consensus 340 q~~~--~---g~~~li~e~G~~~l~ 359 (417)
...- . |--.++-..|++..+
T Consensus 206 ~g~g~~~~~~GP~~l~D~~Gld~~~ 230 (293)
T 1zej_A 206 HHLGLLYTLFGPLGNLDYIGLDVAY 230 (293)
T ss_dssp TTHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred hcCCCCCCCCCHHHHHHHhchHHHH
Confidence 2111 1 445566666765443
No 42
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.45 E-value=1.2e-12 Score=127.17 Aligned_cols=188 Identities=15% Similarity=0.122 Sum_probs=122.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc-h
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~-~ 190 (417)
+||+|||+|+||.++|++|.+. |++|++++|+.++ .+...+.|+.. ..+++|+++ +|+||+++|+. .
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~----~~~~~~~~~-aDvvi~~vp~~~~ 83 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW------PGGVTVYDIRIEA-MTPLAEAGATL----ADSVADVAA-ADLIHITVLDDAQ 83 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS------TTCEEEECSSTTT-SHHHHHTTCEE----CSSHHHHTT-SSEEEECCSSHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHHCCCEE----cCCHHHHHh-CCEEEEECCChHH
Confidence 6899999999999999999999 9999888877554 45556678875 678999999 99999999975 4
Q ss_pred HHHHHHHHHhcCCCCcEEEEecCchhhh---hhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecC
Q 014834 191 QADNYEKIFSCMKPNSILGLSHGFLLGH---LQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (417)
Q Consensus 191 ~~~Vl~eI~~~lk~gaiLi~a~G~~i~~---~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~ 267 (417)
..++++++.+.+++|++|++.+...... +.+ .....++.++- +|-..+.. .-.. |...++ +..
T Consensus 84 ~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~---~a~~-------g~l~~~-~gg 149 (296)
T 3qha_A 84 VREVVGELAGHAKPGTVIAIHSTISDTTAVELAR--DLKARDIHIVD-APVSGGAA---AAAR-------GELATM-VGA 149 (296)
T ss_dssp HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHH--HHGGGTCEEEE-CCEESCHH---HHHH-------TCEEEE-EEC
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHH--HHHHcCCEEEe-CCCcCCHH---HHhc-------CCccEE-ecC
Confidence 5678999999999999999888764322 211 01123455554 45332222 1122 333323 333
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhh-hchHHH----HHHHHHHHHHHcCCCHHHH
Q 014834 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGIL-LGAVHG----IVESLFRRFTENGMSEDLA 334 (417)
Q Consensus 268 dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L-~G~~pA----~iea~~d~~v~~Gl~~e~A 334 (417)
+.+..+.+..++..+|.. ++... ... -++..-+ .+...+ ++.-++..+.+.|+++++.
T Consensus 150 --~~~~~~~~~~ll~~~g~~-~~~~g---~~g---~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~ 212 (296)
T 3qha_A 150 --DREVYERIKPAFKHWAAV-VIHAG---EPG---AGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQAL 212 (296)
T ss_dssp --CHHHHHHHHHHHHHHEEE-EEEEE---STT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred --CHHHHHHHHHHHHHHcCC-eEEcC---Chh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 468899999999999963 21110 000 0000101 112222 2333455678999999887
No 43
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.43 E-value=4.6e-13 Score=127.80 Aligned_cols=193 Identities=12% Similarity=0.053 Sum_probs=122.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
|+||+|||+|+||.+++.+|.+ |++|.+++|+.++ .+...+.|+.. .. ++++++++|+||+++|+..
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-------g~~V~~~~~~~~~-~~~~~~~g~~~----~~-~~~~~~~~D~vi~~v~~~~ 67 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-------RFPTLVWNRTFEK-ALRHQEEFGSE----AV-PLERVAEARVIFTCLPTTR 67 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-------TSCEEEECSSTHH-HHHHHHHHCCE----EC-CGGGGGGCSEEEECCSSHH
T ss_pred CCeEEEEcccHHHHHHHHHHhC-------CCeEEEEeCCHHH-HHHHHHCCCcc----cC-HHHHHhCCCEEEEeCCChH
Confidence 5789999999999999999863 5678877776544 33344446654 33 6788899999999999876
Q ss_pred -HHHHHHHHHhcCCCCcEEEEecCchh---hhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeec
Q 014834 191 -QADNYEKIFSCMKPNSILGLSHGFLL---GHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (417)
Q Consensus 191 -~~~Vl~eI~~~lk~gaiLi~a~G~~i---~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~ 266 (417)
..++++++.+.+++|++|++.+.... ..+.+ .....++.++.. |..++.. .... |...+++ .
T Consensus 68 ~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~--~~~~~g~~~~~~-p~~~~~~---~~~~-------g~~~~~~-~ 133 (289)
T 2cvz_A 68 EVYEVAEALYPYLREGTYWVDATSGEPEASRRLAE--RLREKGVTYLDA-PVSGGTS---GAEA-------GTLTVML-G 133 (289)
T ss_dssp HHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHH--HHHTTTEEEEEC-CEESHHH---HHHH-------TCEEEEE-E
T ss_pred HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEEe-cCCCChh---HHhh-------CCeEEEE-C
Confidence 56788889999999998886654432 22222 111235667765 7655443 2223 3444333 3
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHH----HHHHHHHH---HHHcCCCHHHHHHHHH
Q 014834 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG----IVESLFRR---FTENGMSEDLAYKNTV 339 (417)
Q Consensus 267 ~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA----~iea~~d~---~v~~Gl~~e~A~~~~~ 339 (417)
. +.+..+.+..++ .+|.. ++... +. +....+..+.++ ++.++.|. +.+.|+++++++..+.
T Consensus 134 ~--~~~~~~~~~~ll-~~g~~-~~~~~---~~-----~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 201 (289)
T 2cvz_A 134 G--PEEAVERVRPFL-AYAKK-VVHVG---PV-----GAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVIN 201 (289)
T ss_dssp S--CHHHHHHHGGGC-TTEEE-EEEEE---ST-----THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred C--CHHHHHHHHHHH-hhcCC-eEEcC---CC-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHH
Confidence 2 567888899999 99853 22111 11 111222222222 34555555 8899999998888766
Q ss_pred HHH
Q 014834 340 ECI 342 (417)
Q Consensus 340 q~~ 342 (417)
++.
T Consensus 202 ~~~ 204 (289)
T 2cvz_A 202 ASS 204 (289)
T ss_dssp TST
T ss_pred ccC
Confidence 554
No 44
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.42 E-value=7.6e-13 Score=130.34 Aligned_cols=143 Identities=13% Similarity=0.056 Sum_probs=97.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC-----------ceecCCCcCCHHhhcCcCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-----------FTEENGTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G-----------~~~~~~~~~s~~Ea~~~AD 180 (417)
+||+|||+|+||.++|.+|.++ |++|.+++|+.++. +...+.| +.. ..++++ ++++|
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~------G~~V~~~~r~~~~~-~~l~~~g~~~~~~~~~~~~~~----~~~~~~-~~~aD 82 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN------GEEVILWARRKEIV-DLINVSHTSPYVEESKITVRA----TNDLEE-IKKED 82 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHHH-HHHHHHSCBTTBTTCCCCSEE----ESCGGG-CCTTE
T ss_pred CcEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCHHHH-HHHHHhCCcccCCCCeeeEEE----eCCHHH-hcCCC
Confidence 7999999999999999999999 99999888864443 3333444 232 457778 89999
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEe-cCchhhhhh---hc-ccCCCCCccEEEeccCCCchhHHHHHhhccccc
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS-HGFLLGHLQ---SI-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEIN 255 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a-~G~~i~~~~---~~-~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~ 255 (417)
+||++||++...++++++.+ ++++|+.+ .|+.....+ +. ...++ ....++.+|+.+...
T Consensus 83 vVil~vk~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~~P~~~~~~------------ 146 (335)
T 1z82_A 83 ILVIAIPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLSGPSHAEEV------------ 146 (335)
T ss_dssp EEEECSCGGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEESSCCHHHH------------
T ss_pred EEEEECCHHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEECCccHHHH------------
Confidence 99999999888889887766 77776644 487542111 00 00123 224678999987665
Q ss_pred CCCceEEEeecCCCCHHHHHHHHHHHHHhCC
Q 014834 256 GAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (417)
Q Consensus 256 G~Gv~~liav~~dvsgea~e~a~~L~~alG~ 286 (417)
+.|.+..+....+ + .+.+..++...|.
T Consensus 147 ~~g~~~~~~~g~~-~---~~~~~~ll~~~g~ 173 (335)
T 1z82_A 147 AKKLPTAVTLAGE-N---SKELQKRISTEYF 173 (335)
T ss_dssp HTTCCEEEEEEET-T---HHHHHHHHCCSSE
T ss_pred hCCCceEEEEEeh-h---HHHHHHHhCCCCE
Confidence 2455332333322 1 5677788887774
No 45
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.42 E-value=1.8e-12 Score=135.10 Aligned_cols=192 Identities=14% Similarity=0.096 Sum_probs=125.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc---CceecCCCcCCHHhhcCc---CCEEEEc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISG---SDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~---G~~~~~~~~~s~~Ea~~~---ADIViLa 185 (417)
++|||||+|+||.++|++|.+. |++|.+++|+.++..+...+. |+.. ..+++|++++ +|+||++
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~------G~~V~v~~r~~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvVil~ 85 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR------GYTVSIFNRSREKTEEVIAENPGKKLVP----YYTVKEFVESLETPRRILLM 85 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHHHHHHHHHHSTTSCEEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred CeEEEEccHHHHHHHHHHHHhC------CCeEEEEeCCHHHHHHHHhhCCCCCeEE----eCCHHHHHhCCCCCCEEEEE
Confidence 7899999999999999999999 999998888755444444442 7765 5688898877 9999999
Q ss_pred cCC-chHHHHHHHHHhcCCCCcEEEEec-Cchh--hhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceE
Q 014834 186 ISD-AAQADNYEKIFSCMKPNSILGLSH-GFLL--GHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (417)
Q Consensus 186 vpd-~~~~~Vl~eI~~~lk~gaiLi~a~-G~~i--~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~ 261 (417)
||+ +...++++++.+.+++|++|++++ |... ..+.+ . ....++.++ .+|...+... ... |. .
T Consensus 86 Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~-~-l~~~g~~~v-~~pv~gg~~~---a~~-------g~-~ 151 (480)
T 2zyd_A 86 VKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNR-E-LSAEGFNFI-GTGVSGGEEG---ALK-------GP-S 151 (480)
T ss_dssp SCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH-H-HHHTTCEEE-EEEEESHHHH---HHH-------CC-E
T ss_pred CCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH-H-HHHCCCCee-CCccccCHhH---Hhc-------CC-e
Confidence 999 567889999999999999888655 4421 22222 1 111345666 4575444331 122 34 3
Q ss_pred EEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHH-----------HHHHHHHH---HHH-
Q 014834 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG-----------IVESLFRR---FTE- 326 (417)
Q Consensus 262 liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA-----------~iea~~d~---~v~- 326 (417)
+.+.. +.++.+.+..++..+|.... . -|......++ .|..+. ++.++.|. +++
T Consensus 152 -i~~gg--~~~~~~~v~~ll~~~g~~~~-d----Ge~~v~~~g~----~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~ 219 (480)
T 2zyd_A 152 -IMPGG--QKEAYELVAPILTKIAAVAE-D----GEPCVTYIGA----DGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGG 219 (480)
T ss_dssp -EEEES--CHHHHHHHHHHHHHHSCBCT-T----SCBSBCCCBS----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -EEecC--CHHHHHHHHHHHHHHhcccc-C----CCceEEEECC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 23343 47889999999999996300 0 0000111222 222222 34555555 788
Q ss_pred cCCCHHHHHHHHH
Q 014834 327 NGMSEDLAYKNTV 339 (417)
Q Consensus 327 ~Gl~~e~A~~~~~ 339 (417)
.|++++++.....
T Consensus 220 lGl~~~~~~~l~~ 232 (480)
T 2zyd_A 220 LNLTNEELAQTFT 232 (480)
T ss_dssp HCCCHHHHHHHHH
T ss_pred cCCCHHHHHHHHH
Confidence 5999999887663
No 46
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.42 E-value=1.5e-12 Score=125.24 Aligned_cols=197 Identities=16% Similarity=0.204 Sum_probs=124.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch-
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~- 190 (417)
+||+|||+|.||.+++.+|.+. |++|.+++++.+ ..+...+.|+.. ..+++++++++|+||+++|+..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~~-~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~v~~~~~ 74 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA------GYSLVVSDRNPE-AIADVIAAGAET----ASTAKAIAEQCDVIITMLPNSPH 74 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred ceEEEECchHHHHHHHHHHHhC------CCEEEEEeCCHH-HHHHHHHCCCee----cCCHHHHHhCCCEEEEECCCHHH
Confidence 5899999999999999999998 999887776533 345555568775 5688899999999999999554
Q ss_pred HHHHH---HHHHhcCCCCcEEEEecCc-h--hhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEe
Q 014834 191 QADNY---EKIFSCMKPNSILGLSHGF-L--LGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 191 ~~~Vl---~eI~~~lk~gaiLi~a~G~-~--i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~lia 264 (417)
...++ +++.+.+++|++|+..+.. . ...+.+ .....++.++.. |-.++.. ....+ +... ++
T Consensus 75 ~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~--~~~~~g~~~~~~-pv~~~~~---~~~~~------~~~~-~~ 141 (299)
T 1vpd_A 75 VKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISD--ALKAKGVEMLDA-PVSGGEP---KAIDG------TLSV-MV 141 (299)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHH--HHHTTTCEEEEC-CEESHHH---HHHHT------CEEE-EE
T ss_pred HHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEEe-cCCCCHh---HHhcC------CEEE-Ee
Confidence 56677 5788899999988755443 2 223322 111234566543 4333322 11122 3444 33
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhh-hchHHH-HHHHHHHH---HHHcCCCHHHHHHHHH
Q 014834 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGIL-LGAVHG-IVESLFRR---FTENGMSEDLAYKNTV 339 (417)
Q Consensus 265 v~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L-~G~~pA-~iea~~d~---~v~~Gl~~e~A~~~~~ 339 (417)
.. +.+..+.+..++..+|... +... +..... ..-+ .+...+ ++.++.|. +++.|+++++++..+.
T Consensus 142 -~~--~~~~~~~~~~ll~~~g~~~-~~~~---~~~~~~---~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 211 (299)
T 1vpd_A 142 -GG--DKAIFDKYYDLMKAMAGSV-VHTG---DIGAGN---VTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIR 211 (299)
T ss_dssp -ES--CHHHHHHHHHHHHTTEEEE-EEEE---STTHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred -CC--CHHHHHHHHHHHHHHcCCe-EEeC---CcCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 22 5788899999999999631 1110 111110 0111 122222 34444444 8899999999888776
Q ss_pred HHH
Q 014834 340 ECI 342 (417)
Q Consensus 340 q~~ 342 (417)
++.
T Consensus 212 ~~~ 214 (299)
T 1vpd_A 212 GGL 214 (299)
T ss_dssp TST
T ss_pred ccC
Confidence 654
No 47
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.3e-12 Score=136.82 Aligned_cols=191 Identities=15% Similarity=0.051 Sum_probs=123.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHH-H---cCceecCCCcCCHHhhcCc---CCEEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-A---AGFTEENGTLGDIYETISG---SDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~-~---~G~~~~~~~~~s~~Ea~~~---ADIViL 184 (417)
++|||||+|+||.++|++|.+. |++|.+++|+.++..+... + .|+.. ..+++|++++ +|+||+
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~------G~~V~v~dr~~~~~~~l~~~~~~~~gi~~----~~s~~e~v~~l~~aDvVil 80 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH------GFTVCAYNRTQSKVDHFLANEAKGKSIIG----ATSIEDFISKLKRPRKVML 80 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSHHHHHHHHTTTTTSSEEC----CSSHHHHHHTSCSSCEEEE
T ss_pred CCEEEEeeHHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHcccccCCCeEE----eCCHHHHHhcCCCCCEEEE
Confidence 6899999999999999999999 9999988887655433333 2 46664 5688898877 999999
Q ss_pred ccCCc-hHHHHHHHHHhcCCCCcEEEEecCchh---hhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCce
Q 014834 185 LISDA-AQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGIN 260 (417)
Q Consensus 185 avpd~-~~~~Vl~eI~~~lk~gaiLi~a~G~~i---~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~ 260 (417)
+||+. ...++++++.+.+++|++|++++.... ..+.+ . ....++.++ .+|-..+.. .... |.
T Consensus 81 ~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~-~-l~~~g~~~v-~~pVsgg~~---~a~~-------G~- 146 (497)
T 2p4q_A 81 LVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYE-E-LKKKGILFV-GSGVSGGEE---GARY-------GP- 146 (497)
T ss_dssp CCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH-H-HHHTTCEEE-EEEEESHHH---HHHH-------CC-
T ss_pred EcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHH-H-HHHcCCcee-CCCcccChh---Hhhc-------CC-
Confidence 99995 677899999999999999887665422 22222 0 111345666 346333322 1122 34
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHH-----------HHHHHHHH---HHH
Q 014834 261 SSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG-----------IVESLFRR---FTE 326 (417)
Q Consensus 261 ~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA-----------~iea~~d~---~v~ 326 (417)
. +.+.. +.++.+.+..++..+|... + -|.....+++ .|.++. ++.++.|. +.+
T Consensus 147 ~-im~gg--~~e~~~~v~~ll~~~g~~~--d----Ge~~v~~vg~----~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~ 213 (497)
T 2p4q_A 147 S-LMPGG--SEEAWPHIKNIFQSISAKS--D----GEPCCEWVGP----AGAGHYVKMVHNGIEYGDMQLICEAYDIMKR 213 (497)
T ss_dssp E-EEEEE--CGGGHHHHHHHHHHHSCEE--T----TEESCCCCEE----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred e-EEecC--CHHHHHHHHHHHHHhcCcc--C----CCCceEEECC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 22333 4678899999999999630 0 0000111221 122222 24454444 788
Q ss_pred -cCCCHHHHHHHHH
Q 014834 327 -NGMSEDLAYKNTV 339 (417)
Q Consensus 327 -~Gl~~e~A~~~~~ 339 (417)
.|++++++.....
T Consensus 214 ~lGl~~~~~~~~~~ 227 (497)
T 2p4q_A 214 LGGFTDKEISDVFA 227 (497)
T ss_dssp TTCCCHHHHHHHHH
T ss_pred ccCCCHHHHHHHHH
Confidence 5999998887663
No 48
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.41 E-value=1.6e-12 Score=129.26 Aligned_cols=150 Identities=17% Similarity=0.145 Sum_probs=103.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC--------------ceecCCCcCCHHhhcC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--------------FTEENGTLGDIYETIS 177 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G--------------~~~~~~~~~s~~Ea~~ 177 (417)
+||+|||+|+||.++|.+|.+. |++|.+++|+.++ .+...+.| +.. ..+++++++
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 84 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKK------CREVCVWHMNEEE-VRLVNEKRENVLFLKGVQLASNITF----TSDVEKAYN 84 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTT------EEEEEEECSCHHH-HHHHHHHTBCTTTSTTCBCCTTEEE----ESCHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEECCHHH-HHHHHHcCcccccccccccccceee----eCCHHHHHc
Confidence 4999999999999999999998 9999888776433 33333333 222 357888899
Q ss_pred cCCEEEEccCCchHHHHHHH----HHhcCCC-CcEEEEec-Cchhhhh---hhc-ccCCCCCccEEEeccCCCchhHHHH
Q 014834 178 GSDLVLLLISDAAQADNYEK----IFSCMKP-NSILGLSH-GFLLGHL---QSI-GLDFPKNIGVIAVCPKGMGPSVRRL 247 (417)
Q Consensus 178 ~ADIViLavpd~~~~~Vl~e----I~~~lk~-gaiLi~a~-G~~i~~~---~~~-~i~~~~dv~VI~v~Pntpg~~vr~l 247 (417)
++|+||+++|+....+++++ |.+++++ +++|+... |+..... .+. ...++.....++.+|+.+...
T Consensus 85 ~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~---- 160 (366)
T 1evy_A 85 GAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEV---- 160 (366)
T ss_dssp TCSSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHH----
T ss_pred CCCEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHH----
Confidence 99999999999888899998 9999988 88776554 8754211 010 002232223578889876543
Q ss_pred HhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhC
Q 014834 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALG 285 (417)
Q Consensus 248 y~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG 285 (417)
+.|.+.++.+. ..+.+..+.+..++...|
T Consensus 161 --------~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g 189 (366)
T 1evy_A 161 --------ATGVFTCVSIA-SADINVARRLQRIMSTGD 189 (366)
T ss_dssp --------HTTCCEEEEEE-CSSHHHHHHHHHHHSCTT
T ss_pred --------HhCCceEEEEe-cCCHHHHHHHHHHhcCCC
Confidence 23454433333 235678888899999883
No 49
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.40 E-value=3.4e-12 Score=124.25 Aligned_cols=155 Identities=12% Similarity=0.067 Sum_probs=104.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEec--CChhhHHHHHHcCceecC-------CCcC--CHHhhcCcCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR--KGSRSFAEARAAGFTEEN-------GTLG--DIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r--~~s~s~~~A~~~G~~~~~-------~~~~--s~~Ea~~~AD 180 (417)
+||+|||+|+||.++|.+|.+. |++|++++| +. ...+...+.|..... .... ++.++++++|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~------g~~V~~~~r~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D 73 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN------GNEVRIWGTEFDT-EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAE 73 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH------CCEEEEECCGGGH-HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEEccCCH-HHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCC
Confidence 4899999999999999999999 999988877 43 334445555531100 0123 6778889999
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEec-Cc------hhhhhhhccc-CCCC-CccEEEeccCCCchhHHHHHhhc
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH-GF------LLGHLQSIGL-DFPK-NIGVIAVCPKGMGPSVRRLYVQG 251 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~-G~------~i~~~~~~~i-~~~~-dv~VI~v~Pntpg~~vr~ly~~G 251 (417)
+||+++|+....++++++.+ ++++++|+... |+ ....+.+... .++. ..-.++.+|+.+...
T Consensus 74 ~vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~-------- 144 (335)
T 1txg_A 74 VVLLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREV-------- 144 (335)
T ss_dssp EEEECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHH--------
T ss_pred EEEEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHH--------
Confidence 99999999999999999999 99999877554 87 2223322000 1111 113567888775433
Q ss_pred ccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 252 KEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 252 ~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
+.|.+..+.+.. .+.+..+.+..++...|..
T Consensus 145 ----~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~ 175 (335)
T 1txg_A 145 ----AKRMPTTVVFSS-PSESSANKMKEIFETEYFG 175 (335)
T ss_dssp ----HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEE
T ss_pred ----HccCCcEEEEEe-CCHHHHHHHHHHhCCCcEE
Confidence 234533233333 2567888889999988853
No 50
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.40 E-value=5.5e-12 Score=126.71 Aligned_cols=152 Identities=13% Similarity=0.174 Sum_probs=105.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec--------C--CCcCCHHhhcCcCCE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE--------N--GTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~--------~--~~~~s~~Ea~~~ADI 181 (417)
+||+|||+|+||.++|..|.++ |++|.+++|+.+ ..+...+.|.... + ....+++++++++|+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~------G~~V~l~~r~~~-~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK------GQKVRLWSYESD-HVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT------TCCEEEECSCHH-HHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCE
T ss_pred CeEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHH-HHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCE
Confidence 6899999999999999999999 999988877643 3344444332100 0 013578899999999
Q ss_pred EEEccCCchHHHHHHHHHhcCCCCcEEE-EecCchhh------hhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccc
Q 014834 182 VLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLLG------HLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEI 254 (417)
Q Consensus 182 ViLavpd~~~~~Vl~eI~~~lk~gaiLi-~a~G~~i~------~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~ 254 (417)
||+++|++...+++++|.++++++++|+ .+.|+... .+.+ .+|..--.++..|+....+
T Consensus 103 VilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~---~l~~~~~~vlsgP~~a~ev----------- 168 (356)
T 3k96_A 103 ILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVAT---ELGQVPMAVISGPSLATEV----------- 168 (356)
T ss_dssp EEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHH---HHCSCCEEEEESSCCHHHH-----------
T ss_pred EEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHH---HcCCCCEEEEECccHHHHH-----------
Confidence 9999999999999999999999998765 66777643 2322 2232223567888775443
Q ss_pred cCCCceEEEeecCCCCHHHHHHHHHHHHHhCC
Q 014834 255 NGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (417)
Q Consensus 255 ~G~Gv~~liav~~dvsgea~e~a~~L~~alG~ 286 (417)
+.|.+..+.+.. .+.+..+.+..++...|.
T Consensus 169 -~~g~pt~~via~-~~~~~~~~v~~lf~~~~~ 198 (356)
T 3k96_A 169 -AANLPTAVSLAS-NNSQFSKDLIERLHGQRF 198 (356)
T ss_dssp -HTTCCEEEEEEE-SCHHHHHHHHHHHCCSSE
T ss_pred -HcCCCeEEEEec-CCHHHHHHHHHHhCCCCe
Confidence 245555444433 245677777888876664
No 51
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.39 E-value=3.6e-12 Score=125.30 Aligned_cols=195 Identities=16% Similarity=0.088 Sum_probs=124.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc-h
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~-~ 190 (417)
+||+|||+|+||.++|++|.+. |++|++++|+.+ ..+...+.|+.. ..+++|++++||+||+++|+. .
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~-~~~~l~~~g~~~----~~~~~e~~~~aDvVi~~vp~~~~ 100 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA------GYALQVWNRTPA-RAASLAALGATI----HEQARAAARDADIVVSMLENGAV 100 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHTTTCEE----ESSHHHHHTTCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHhC------CCeEEEEcCCHH-HHHHHHHCCCEe----eCCHHHHHhcCCEEEEECCCHHH
Confidence 8999999999999999999999 999988877644 445555668775 678999999999999999975 5
Q ss_pred HHHHHH--HHHhcCCCCcEEEEecCchhhhhhhc-ccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecC
Q 014834 191 QADNYE--KIFSCMKPNSILGLSHGFLLGHLQSI-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (417)
Q Consensus 191 ~~~Vl~--eI~~~lk~gaiLi~a~G~~i~~~~~~-~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~ 267 (417)
..+++. ++.+.+++|++|++.+.......... ......++.++. +|-..+.. .-.. |-..++ +..
T Consensus 101 ~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~---~a~~-------g~l~i~-~gg 168 (320)
T 4dll_A 101 VQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLD-TPVSGGTV---GAEQ-------GTLVIM-AGG 168 (320)
T ss_dssp HHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECHHH---HHHH-------TCEEEE-EES
T ss_pred HHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEe-CCCcCCHh---HHhc-------CCeeEE-eCC
Confidence 567777 78889999999998877643221110 001123455654 35332222 1122 232323 233
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhh-hchHHH----HHHHHHHHHHHcCCCHHHHHHHHH
Q 014834 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGIL-LGAVHG----IVESLFRRFTENGMSEDLAYKNTV 339 (417)
Q Consensus 268 dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L-~G~~pA----~iea~~d~~v~~Gl~~e~A~~~~~ 339 (417)
+.++.+.+..++..+ .. ++... ... -++..-+ .+...+ ++.-++..+.+.|+++++.+....
T Consensus 169 --~~~~~~~~~~ll~~~-~~-~~~~g---~~g---~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~ 235 (320)
T 4dll_A 169 --KPADFERSLPLLKVF-GR-ATHVG---PHG---SGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAIT 235 (320)
T ss_dssp --CHHHHHHHHHHHHHH-EE-EEEEE---STT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHT
T ss_pred --CHHHHHHHHHHHHhc-CC-EEEeC---Ccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 467899999999999 43 22211 100 0111111 122222 233345567889999998877544
No 52
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.39 E-value=7.9e-12 Score=123.15 Aligned_cols=149 Identities=9% Similarity=0.028 Sum_probs=104.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-------cEEEEEecCChh----hHHHHHHcC--------------ceecC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-------IVVKVGLRKGSR----SFAEARAAG--------------FTEEN 166 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-------~~ViVg~r~~s~----s~~~A~~~G--------------~~~~~ 166 (417)
+||+|||+|+||.++|.+|.++ | ++|.+++|+... ..+...+.+ +..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~------g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-- 80 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN------AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA-- 80 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE--
T ss_pred CeEEEECCCHHHHHHHHHHHhc------CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE--
Confidence 6999999999999999999998 8 889888776540 223222221 221
Q ss_pred CCcCCHHhhcCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEE-EecCchh-----h----hhhhcccCCCCCccEEEec
Q 014834 167 GTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL-----G----HLQSIGLDFPKNIGVIAVC 236 (417)
Q Consensus 167 ~~~~s~~Ea~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi-~a~G~~i-----~----~~~~~~i~~~~dv~VI~v~ 236 (417)
..+++++++++|+||+++|++...+++++|.++++++++|+ .+.|+.+ . .+.+ .++.+ ..++.+
T Consensus 81 --~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~---~~~~~-~~v~~g 154 (354)
T 1x0v_A 81 --VPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGE---RLGIP-MSVLMG 154 (354)
T ss_dssp --ESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHH---HHTCC-EEEEEC
T ss_pred --EcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHH---HcCCC-EEEEEC
Confidence 35788889999999999999988999999999999999766 5557753 1 1111 12322 467889
Q ss_pred cCCCchhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 237 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 237 Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
|+++... +.|.+..+.+. ..+.+..+.+..++...|..
T Consensus 155 p~~a~~v------------~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~ 192 (354)
T 1x0v_A 155 ANIASEV------------ADEKFCETTIG-CKDPAQGQLLKELMQTPNFR 192 (354)
T ss_dssp SCCHHHH------------HTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEE
T ss_pred CCcHHHH------------HhcCCceEEEE-ECCHHHHHHHHHHhCCCCEE
Confidence 9887544 24554433333 23567888888999888753
No 53
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.39 E-value=7.3e-12 Score=125.31 Aligned_cols=148 Identities=10% Similarity=-0.006 Sum_probs=103.8
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCC-------cEEEEEecCCh-----hhHHHHHHc--------------Ccee
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD-------IVVKVGLRKGS-----RSFAEARAA--------------GFTE 164 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-------~~ViVg~r~~s-----~s~~~A~~~--------------G~~~ 164 (417)
|+||+|||+|+||.++|.+|.++ | ++|.+++|..+ .. +...+. ++..
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~------G~~~~~~~~~V~~~~r~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~ 93 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN------AKNNYLFENEVRMWIRDEFVNGERMV-DIINNKHENTKYLKGVPLPHNIVA 93 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH------HHHCTTBCSCEEEECCSCC---CCHH-HHHHHHCBCTTTSTTCBCCTTEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHc------CCccCCCCCeEEEEECChhhhhHHHH-HHHHhcCcccccCCcccCcCCeEE
Confidence 46899999999999999999998 8 88988887644 32 222222 2222
Q ss_pred cCCCcCCHHhhcCcCCEEEEccCCchHHHHHHHHHh----cCCCCcEEEEe-cCchhh---------hhhhcccCCCCCc
Q 014834 165 ENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFS----CMKPNSILGLS-HGFLLG---------HLQSIGLDFPKNI 230 (417)
Q Consensus 165 ~~~~~~s~~Ea~~~ADIViLavpd~~~~~Vl~eI~~----~lk~gaiLi~a-~G~~i~---------~~~~~~i~~~~dv 230 (417)
+.+++++++++|+||++||++...+++++|.+ .++++++|+.. .|+... .+.. .++.+
T Consensus 94 ----~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~---~~~~~- 165 (375)
T 1yj8_A 94 ----HSDLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISD---FLNIP- 165 (375)
T ss_dssp ----ESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHH---HSSSC-
T ss_pred ----ECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHH---HcCCC-
Confidence 35678889999999999999888999999999 99999977644 476541 1111 12322
Q ss_pred cEEEeccCCCchhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCC
Q 014834 231 GVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (417)
Q Consensus 231 ~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~ 286 (417)
-.++.+|+.+... +.|.+..+.+.. .+.+..+.+..++...|.
T Consensus 166 ~~v~~gp~~a~~v------------~~g~~~~~~~~~-~~~~~~~~v~~ll~~~g~ 208 (375)
T 1yj8_A 166 CSALSGANIAMDV------------AMENFSEATIGG-NDKDSLVIWQRVFDLPYF 208 (375)
T ss_dssp EEEEECSCCHHHH------------HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTE
T ss_pred EEEEeCCchHHHH------------HhCCCeEEEEec-CCHHHHHHHHHHhCCCCe
Confidence 3567889886544 234554333332 356788888889988874
No 54
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.38 E-value=3.6e-12 Score=120.65 Aligned_cols=185 Identities=16% Similarity=0.130 Sum_probs=112.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-ChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~-~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
+||+|||+|+||.++|.+|.+. |++|+++++. .....+...+.|+. .+++++++++|+||+++|+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~------g~~V~~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~aDvvi~~v~~~~ 68 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR------GVEVVTSLEGRSPSTIERARTVGVT------ETSEEDVYSCPVVISAVTPGV 68 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT------TCEEEECCTTCCHHHHHHHHHHTCE------ECCHHHHHTSSEEEECSCGGG
T ss_pred CeEEEEechHHHHHHHHHHHHC------CCeEEEeCCccCHHHHHHHHHCCCc------CCHHHHHhcCCEEEEECCCHH
Confidence 4899999999999999999999 9998875442 23334444455664 367788899999999999998
Q ss_pred HHHHHHHHHhcCCCCcEEEEecCchh---hhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceEEEeecC
Q 014834 191 QADNYEKIFSCMKPNSILGLSHGFLL---GHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (417)
Q Consensus 191 ~~~Vl~eI~~~lk~gaiLi~a~G~~i---~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~ 267 (417)
+.+.+.++.+.+++ +|++.++... ..+.+ .+++. .++. +|-..++. ... .|.+ +++...
T Consensus 69 ~~~~~~~~~~~~~~--~vi~~s~~~~~~~~~l~~---~~~~~-g~~~-~~v~~~~~---~~~-------~g~~-~~~~g~ 130 (264)
T 1i36_A 69 ALGAARRAGRHVRG--IYVDINNISPETVRMASS---LIEKG-GFVD-AAIMGSVR---RKG-------ADIR-IIASGR 130 (264)
T ss_dssp HHHHHHHHHTTCCS--EEEECSCCCHHHHHHHHH---HCSSS-EEEE-EEECSCHH---HHG-------GGCE-EEEEST
T ss_pred HHHHHHHHHHhcCc--EEEEccCCCHHHHHHHHH---HHhhC-Ceee-eeeeCCcc---ccc-------cCCe-EEecCC
Confidence 77767788888877 7777777643 23333 23332 1332 34222211 111 3455 344333
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHH----HHHHHHHH---HHHcCCCHHHHHHHHHH
Q 014834 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG----IVESLFRR---FTENGMSEDLAYKNTVE 340 (417)
Q Consensus 268 dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA----~iea~~d~---~v~~Gl~~e~A~~~~~q 340 (417)
+ . +.+.. +..+|.. ++.. .++ .+....+..+.++ ++.++.|. +++.|++++ ++....+
T Consensus 131 ~---~--~~~~~-l~~~g~~-~~~~------~~~-~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~ 195 (264)
T 1i36_A 131 D---A--EEFMK-LNRYGLN-IEVR------GRE-PGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEY 195 (264)
T ss_dssp T---H--HHHHG-GGGGTCE-EEEC------SSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHT
T ss_pred c---H--HHhhh-HHHcCCe-eEEC------CCC-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHH
Confidence 2 1 66777 8889863 1111 111 2333332222222 34455555 899999986 7766555
Q ss_pred H
Q 014834 341 C 341 (417)
Q Consensus 341 ~ 341 (417)
+
T Consensus 196 ~ 196 (264)
T 1i36_A 196 T 196 (264)
T ss_dssp T
T ss_pred h
Confidence 3
No 55
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.38 E-value=7.6e-12 Score=123.25 Aligned_cols=93 Identities=19% Similarity=0.130 Sum_probs=78.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCCh------hhHHHHHHcCceecCCCcC-CHHhhcCcCCEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGS------RSFAEARAAGFTEENGTLG-DIYETISGSDLVL 183 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-~~ViVg~r~~s------~s~~~A~~~G~~~~~~~~~-s~~Ea~~~ADIVi 183 (417)
+||||||+|+||.++|++|.+. | ++|++++++.. ...+...+.|+ . . +++|++++||+||
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~------G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~-----~~s~~e~~~~aDvVi 92 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR------NAARLAAYDLRFNDPAASGALRARAAELGV-E-----PLDDVAGIACADVVL 92 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECGGGGCTTTHHHHHHHHHHTTC-E-----EESSGGGGGGCSEEE
T ss_pred CeEEEECccHHHHHHHHHHHHc------CCCeEEEEeCCCccccchHHHHHHHHHCCC-C-----CCCHHHHHhcCCEEE
Confidence 7999999999999999999999 9 99988887641 23444555666 2 4 7889999999999
Q ss_pred EccCCchHHHHHHHHHhcCCCCcEEEEecCchh
Q 014834 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLL 216 (417)
Q Consensus 184 Lavpd~~~~~Vl~eI~~~lk~gaiLi~a~G~~i 216 (417)
+++|+....++++++.+.++++++|++.+++..
T Consensus 93 ~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p 125 (317)
T 4ezb_A 93 SLVVGAATKAVAASAAPHLSDEAVFIDLNSVGP 125 (317)
T ss_dssp ECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCH
T ss_pred EecCCHHHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence 999999999888999999999999998887643
No 56
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.37 E-value=6.7e-12 Score=120.77 Aligned_cols=196 Identities=15% Similarity=0.096 Sum_probs=123.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch-
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~- 190 (417)
+||+|||+|+||.+++.+|.+. |++|.+++++.+ ..+...+.|+.. ..+++++++++|+|++++|+..
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~~-~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~vp~~~~ 73 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE------GVTVYAFDLMEA-NVAAVVAQGAQA----CENNQKVAAASDIIFTSLPNAGI 73 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT------TCEEEEECSSHH-HHHHHHTTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHH-HHHHHHHCCCee----cCCHHHHHhCCCEEEEECCCHHH
Confidence 7899999999999999999998 999887776543 344445557765 5688899999999999998655
Q ss_pred HHHHHH---HHHhcCCCCcEEEEe-cCc--hhhhhhhcccCCC-CCccEEEeccCCCchhHHHHHhhcccccCCCceEEE
Q 014834 191 QADNYE---KIFSCMKPNSILGLS-HGF--LLGHLQSIGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (417)
Q Consensus 191 ~~~Vl~---eI~~~lk~gaiLi~a-~G~--~i~~~~~~~i~~~-~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~li 263 (417)
...++. ++.+.++++++|+.. .|. ....+.+ .++ ..+.++. +|..++.. .... |...++
T Consensus 74 ~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~---~~~~~g~~~~~-~p~~~~~~---~a~~-------g~~~~~ 139 (301)
T 3cky_A 74 VETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAK---VAAEKGIDYVD-APVSGGTK---GAEA-------GTLTIM 139 (301)
T ss_dssp HHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHH---HHHHTTCEEEE-CCEESHHH---HHHH-------TCEEEE
T ss_pred HHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCeEEE-ccCCCCHH---HHHc-------CCeEEE
Confidence 567775 788899999987754 454 2333332 111 2455553 46544432 2222 343334
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchh-hhchHHH-HHHHHH---HHHHHcCCCHHHHHHHH
Q 014834 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGI-LLGAVHG-IVESLF---RRFTENGMSEDLAYKNT 338 (417)
Q Consensus 264 av~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~-L~G~~pA-~iea~~---d~~v~~Gl~~e~A~~~~ 338 (417)
+ .. +.+..+.+..++..+|....+.. .... +...- +.+...+ ++.++. ..+++.|+++++++..+
T Consensus 140 ~-~g--~~~~~~~v~~ll~~~g~~~~~~~----~~g~---~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 209 (301)
T 3cky_A 140 V-GA--SEAVFEKIQPVLSVIGKDIYHVG----DTGA---GDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEII 209 (301)
T ss_dssp E-ES--CHHHHHHHHHHHHHHEEEEEEEE----STTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred E-CC--CHHHHHHHHHHHHHhcCCEEEeC----CCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3 33 57888999999999996411110 0000 00000 1111111 223333 33889999999888776
Q ss_pred HHHH
Q 014834 339 VECI 342 (417)
Q Consensus 339 ~q~~ 342 (417)
.++.
T Consensus 210 ~~~~ 213 (301)
T 3cky_A 210 GKSS 213 (301)
T ss_dssp HTST
T ss_pred HcCC
Confidence 6654
No 57
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.37 E-value=4.6e-13 Score=141.09 Aligned_cols=167 Identities=19% Similarity=0.160 Sum_probs=121.3
Q ss_pred hhhccccccccc-chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcC
Q 014834 92 FIVRGGRDLFKL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (417)
Q Consensus 92 ~~vr~g~~~f~~-~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~ 170 (417)
.-+|+|+|.... ....+.| ++|||||+|+||.++|++|+.. |++|+++++.. +.+.+.+.|+.. .
T Consensus 123 ~~~~~g~w~~~~~~~~~l~g-~~vgIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~--~~~~a~~~g~~~-----~ 188 (529)
T 1ygy_A 123 ASLREHTWKRSSFSGTEIFG-KTVGVVGLGRIGQLVAQRIAAF------GAYVVAYDPYV--SPARAAQLGIEL-----L 188 (529)
T ss_dssp HHHHTTCCCGGGCCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECTTS--CHHHHHHHTCEE-----C
T ss_pred HHHHhCCCcccCcCccccCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEECCCC--ChhHHHhcCcEE-----c
Confidence 356789996432 2368999 9999999999999999999998 99988776653 345567778874 3
Q ss_pred CHHhhcCcCCEEEEccCCc-hHHHHHHH-HHhcCCCCcEEEEec-Cchhhh--hhhcccCCCC------CccEEEeccCC
Q 014834 171 DIYETISGSDLVLLLISDA-AQADNYEK-IFSCMKPNSILGLSH-GFLLGH--LQSIGLDFPK------NIGVIAVCPKG 239 (417)
Q Consensus 171 s~~Ea~~~ADIViLavpd~-~~~~Vl~e-I~~~lk~gaiLi~a~-G~~i~~--~~~~~i~~~~------dv~VI~v~Pnt 239 (417)
+++|++++||+|++++|+. ....++.+ +.+.||+|++|+.++ |-.+.. +.+ .+++ .++|+..+|.
T Consensus 189 ~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~---al~~g~i~ga~lDv~~~eP~- 264 (529)
T 1ygy_A 189 SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALAD---AITGGHVRAAGLDVFATEPC- 264 (529)
T ss_dssp CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHH---HHHTSSEEEEEESSCSSSSC-
T ss_pred CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHH---HHHcCCccEEEEeeccCCCC-
Confidence 8999999999999999998 55677764 888999999988655 322211 111 1111 3577888884
Q ss_pred CchhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHH-----HHHHHHHhCCC
Q 014834 240 MGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV-----ALGWSVALGSP 287 (417)
Q Consensus 240 pg~~vr~ly~~G~~~~G~Gv~~liav~~d-vsgea~e~-----a~~L~~alG~~ 287 (417)
+.+ .+|. +-+++++||.. .+.++.+. +..+...+++.
T Consensus 265 ~~~---~L~~--------~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~ 307 (529)
T 1ygy_A 265 TDS---PLFE--------LAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGE 307 (529)
T ss_dssp SCC---GGGG--------CTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCc---hHHh--------CCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 222 2443 35788999987 67777765 77888888874
No 58
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.37 E-value=3.5e-12 Score=122.23 Aligned_cols=196 Identities=12% Similarity=0.077 Sum_probs=121.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
|+||+|||+|+||.+++.+|.+. |++|++++ +.++ .+...+.|+.. ..+++++++++|+||+++|+..
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~-~~~~-~~~~~~~g~~~----~~~~~~~~~~~D~vi~~vp~~~ 70 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA------GHQLHVTT-IGPV-ADELLSLGAVN----VETARQVTEFADIIFIMVPDTP 70 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT------TCEEEECC-SSCC-CHHHHTTTCBC----CSSHHHHHHTCSEEEECCSSHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCEEEEEc-CHHH-HHHHHHcCCcc----cCCHHHHHhcCCEEEEECCCHH
Confidence 47999999999999999999998 99988776 4333 34444557664 5688899999999999998877
Q ss_pred H-HHHHH---HHHhcCCCCcEEEEecCch---hhhhhhcccCCC-CCccEEEeccCCCchhHHHHHhhcccccCCCceEE
Q 014834 191 Q-ADNYE---KIFSCMKPNSILGLSHGFL---LGHLQSIGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSS 262 (417)
Q Consensus 191 ~-~~Vl~---eI~~~lk~gaiLi~a~G~~---i~~~~~~~i~~~-~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~l 262 (417)
+ .+++. ++.+.+++|++|++.+... ...+.+ .++ ..+.++ -.|...+. ..... |...+
T Consensus 71 ~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~---~~~~~g~~~~-~~p~~~~~---~~a~~-------g~~~~ 136 (295)
T 1yb4_A 71 QVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQ---RVNEMGADYL-DAPVSGGE---IGARE-------GTLSI 136 (295)
T ss_dssp HHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHH---HHHTTTEEEE-ECCEESHH---HHHHH-------TCEEE
T ss_pred HHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCeEE-EccCCCCH---HHHHc-------CCeEE
Confidence 4 67887 7888899999887555432 222322 112 234444 23433222 12222 34333
Q ss_pred EeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccch-hhhchHHH-HHHHHHHH---HHHcCCCHHHHHHH
Q 014834 263 FAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERG-ILLGAVHG-IVESLFRR---FTENGMSEDLAYKN 337 (417)
Q Consensus 263 iav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t-~L~G~~pA-~iea~~d~---~v~~Gl~~e~A~~~ 337 (417)
++ .. +.+..+.+..++..+|.. ++... +.... ... .+.+...+ ++.++.|. +.+.|+++++++..
T Consensus 137 ~~-~~--~~~~~~~~~~ll~~~g~~-~~~~~---~~~~~---~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~ 206 (295)
T 1yb4_A 137 MV-GG--EQKVFDRVKPLFDILGKN-ITLVG---GNGDG---QTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQA 206 (295)
T ss_dssp EE-ES--CHHHHHHHHHHHHHHEEE-EEEEE---STTHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred EE-CC--CHHHHHHHHHHHHHhcCC-EEEeC---CCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 33 33 578889999999999963 11110 11110 000 11222222 33444444 88999999988877
Q ss_pred HHHHH
Q 014834 338 TVECI 342 (417)
Q Consensus 338 ~~q~~ 342 (417)
..++.
T Consensus 207 ~~~~~ 211 (295)
T 1yb4_A 207 LMGGF 211 (295)
T ss_dssp HTSSS
T ss_pred HHcCC
Confidence 66544
No 59
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.36 E-value=1.6e-11 Score=127.53 Aligned_cols=193 Identities=13% Similarity=0.068 Sum_probs=124.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc---CceecCCCcCCHHhhcCc---CCEEEEc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISG---SDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~---G~~~~~~~~~s~~Ea~~~---ADIViLa 185 (417)
++|||||+|+||.++|++|.+. |++|.+++|+.++..+...+. |+.. ..+++|++++ +|+||++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~------G~~V~v~dr~~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvVila 75 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR------GYTVAIYNRTTSKTEEVFKEHQDKNLVF----TKTLEEFVGSLEKPRRIMLM 75 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHTTTSCEEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred CcEEEEeeHHHHHHHHHHHHhC------CCEEEEEcCCHHHHHHHHHhCcCCCeEE----eCCHHHHHhhccCCCEEEEE
Confidence 6899999999999999999999 999988887655444444443 6664 5688888876 9999999
Q ss_pred cCCc-hHHHHHHHHHhcCCCCcEEEEec-Cch--hhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCceE
Q 014834 186 ISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (417)
Q Consensus 186 vpd~-~~~~Vl~eI~~~lk~gaiLi~a~-G~~--i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~~ 261 (417)
||+. ...++++++.+.+++|++|++.+ |.. ...+.+ .....++.++ .+|...+... ... |...
T Consensus 76 vp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~--~l~~~g~~~v-~~pv~gg~~~---a~~-------g~~i 142 (474)
T 2iz1_A 76 VQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNA--ELADSGINFI-GTGVSGGEKG---ALL-------GPSM 142 (474)
T ss_dssp CCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HTTTSSCEEE-EEEECSHHHH---HHH-------CCCE
T ss_pred ccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHH--HHHHCCCeEE-CCCCCCChhh---hcc-------CCeE
Confidence 9995 56789999999999999887655 442 222322 1112355665 4676544331 122 3422
Q ss_pred EEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHH-----------HHHHHHHH---HHH-
Q 014834 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG-----------IVESLFRR---FTE- 326 (417)
Q Consensus 262 liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA-----------~iea~~d~---~v~- 326 (417)
+ +.. +.++.+.+..++..+|....+. .+......++ .|..+. ++.++.|. +.+
T Consensus 143 -~-~gg--~~~~~~~v~~ll~~~g~~~~~d----ge~~~~~~g~----~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~ 210 (474)
T 2iz1_A 143 -M-PGG--QKEAYDLVAPIFEQIAAKAPQD----GKPCVAYMGA----NGAGHYVKMVHNGIEYGDMQLIAESYDLLKRI 210 (474)
T ss_dssp -E-EEE--CHHHHHHHHHHHHHHSCBCTTT----CCBSBCCCBS----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -E-ecC--CHHHHHHHHHHHHHHhcccccC----CCceEEEECC----ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Confidence 3 233 5788999999999999641000 0000011222 122221 24454444 788
Q ss_pred cCCCHHHHHHHHH
Q 014834 327 NGMSEDLAYKNTV 339 (417)
Q Consensus 327 ~Gl~~e~A~~~~~ 339 (417)
.|++++++.....
T Consensus 211 ~Gl~~~~~~~l~~ 223 (474)
T 2iz1_A 211 LGLSNAEIQAIFE 223 (474)
T ss_dssp SCCCHHHHHHHHH
T ss_pred cCCCHHHHHHHHH
Confidence 7999998877664
No 60
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.06 E-value=5.5e-14 Score=130.38 Aligned_cols=151 Identities=14% Similarity=0.093 Sum_probs=105.0
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccC
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavp 187 (417)
.++ +||+|||+|+||.+++++|.+. |++|++++|... .+...+.|+.. .+..++++++|+||+++|
T Consensus 17 ~~~-~~I~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~~--~~~~~~~g~~~-----~~~~~~~~~aDvVilav~ 82 (201)
T 2yjz_A 17 EKQ-GVVCIFGTGDFGKSLGLKMLQC------GYSVVFGSRNPQ--VSSLLPRGAEV-----LCYSEAASRSDVIVLAVH 82 (201)
Confidence 455 7999999999999999999998 988888777543 22233346553 377889999999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEE-EecCchh--------hhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCC
Q 014834 188 DAAQADNYEKIFSCMKPNSILG-LSHGFLL--------GHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi-~a~G~~i--------~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~G 258 (417)
++...+++ ++.+ ++++++|+ ++.|+.. .++++ .++. -++|+.|||+|..........| .
T Consensus 83 ~~~~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~---~~~~-~~vvra~~n~~a~~~~~g~l~g-----~- 150 (201)
T 2yjz_A 83 REHYDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQ---LVPG-AHVVKAFNTISAWALQSGTLDA-----S- 150 (201)
Confidence 98777776 5554 45677655 6778742 34433 3343 4799999999988732111111 0
Q ss_pred ceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 259 INSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 259 v~~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
...+++ .. +.++.+.+..|+..+|..
T Consensus 151 ~~~~~~-g~--~~~~~~~v~~ll~~~G~~ 176 (201)
T 2yjz_A 151 RQVFVC-GN--DSKAKDRVMDIARTLGLT 176 (201)
Confidence 123233 33 357888999999999964
No 61
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.34 E-value=1.9e-11 Score=122.99 Aligned_cols=151 Identities=16% Similarity=0.112 Sum_probs=107.9
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcC---CEEE
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGS---DLVL 183 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~A---DIVi 183 (417)
-+++ +||||||+|+||.++|++|.+. |++|.+++|+.+ ..+.+.+.|+.. ..+++|+++++ |+||
T Consensus 19 Mm~~-mkIgiIGlG~mG~~~A~~L~~~------G~~V~v~dr~~~-~~~~l~~~g~~~----~~s~~e~~~~a~~~DvVi 86 (358)
T 4e21_A 19 YFQS-MQIGMIGLGRMGADMVRRLRKG------GHECVVYDLNVN-AVQALEREGIAG----ARSIEEFCAKLVKPRVVW 86 (358)
T ss_dssp ---C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHTTTCBC----CSSHHHHHHHSCSSCEEE
T ss_pred hhcC-CEEEEECchHHHHHHHHHHHhC------CCEEEEEeCCHH-HHHHHHHCCCEE----eCCHHHHHhcCCCCCEEE
Confidence 3455 8999999999999999999999 999988877643 455566678775 57899999999 9999
Q ss_pred EccCCchHHHHHHHHHhcCCCCcEEEEecCchhh---hhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCce
Q 014834 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGIN 260 (417)
Q Consensus 184 Lavpd~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~---~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~ 260 (417)
+++|+....++++++.+.+++|++|++.+..... .+.+ ....+++.++- +|-.-+.. .-+. |.
T Consensus 87 ~~vp~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~--~l~~~g~~~vd-apVsGg~~---~a~~-------G~- 152 (358)
T 4e21_A 87 LMVPAAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRAD--QMRAQGITYVD-VGTSGGIF---GLER-------GY- 152 (358)
T ss_dssp ECSCGGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHH--HHHTTTCEEEE-EEEECGGG---HHHH-------CC-
T ss_pred EeCCHHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHH--HHHHCCCEEEe-CCCCCCHH---HHhc-------CC-
Confidence 9999997778999999999999999988765421 1211 11234566664 34222221 1122 33
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHhCC
Q 014834 261 SSFAVHQDVDGRATNVALGWSVALGS 286 (417)
Q Consensus 261 ~liav~~dvsgea~e~a~~L~~alG~ 286 (417)
. +.+.. +.++.+.++.++..+|.
T Consensus 153 ~-im~GG--~~~a~~~~~~ll~~lg~ 175 (358)
T 4e21_A 153 C-LMIGG--EKQAVERLDPVFRTLAP 175 (358)
T ss_dssp E-EEEES--CHHHHHHTHHHHHHHSC
T ss_pred e-eeecC--CHHHHHHHHHHHHHhcc
Confidence 3 33344 46899999999999994
No 62
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.34 E-value=1.4e-12 Score=125.83 Aligned_cols=210 Identities=15% Similarity=0.097 Sum_probs=122.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCChhhHHHHHH-cCceecC--CC-------cCCHHhhcCcCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARA-AGFTEEN--GT-------LGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-~~ViVg~r~~s~s~~~A~~-~G~~~~~--~~-------~~s~~Ea~~~AD 180 (417)
+||+|||+|+||.++|.+|.++... .-| ++|++++| . ...+...+ .|+...+ +. ..+..+.++.+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~-~~g~~~V~~~~r-~-~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAA-TDGLLEVSWIAR-G-AHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVD 85 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH-TTSSEEEEEECC-H-HHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccc-cCCCCCEEEEEc-H-HHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCC
Confidence 5899999999999999999864000 004 68888777 3 33445555 6776411 00 013345678999
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEE-EecCchh-hhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCC
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi-~a~G~~i-~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~G 258 (417)
+||+++|+....++++++.++++++++|+ +..|+.. ..+.+ .+|+. .+++.+|+.+.......... ..+.|
T Consensus 86 ~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~---~l~~~-~v~~g~~~~~a~~~~pg~~~---~~~~g 158 (317)
T 2qyt_A 86 YILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIAERMRT---YLPDT-VVWKGCVYISARKSAPGLIT---LEADR 158 (317)
T ss_dssp EEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTT---TSCTT-TBCEEEEEEEEEEEETTEEE---EEEEE
T ss_pred EEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHH---HCCCC-cEEEEEEEEEEEEcCCCEEE---EcCCC
Confidence 99999999999999999999998888665 5678765 34433 34443 56677776554431000000 01234
Q ss_pred ceEEEeec-CCCCHHHHHHHHHHHHHhCCCceeccchhhh-----hhhhccccchhhhchHHHHH------------HHH
Q 014834 259 INSSFAVH-QDVDGRATNVALGWSVALGSPFTFATTLEQE-----YKSDIFGERGILLGAVHGIV------------ESL 320 (417)
Q Consensus 259 v~~liav~-~dvsgea~e~a~~L~~alG~~~~iettf~~e-----~~~dl~ge~t~L~G~~pA~i------------ea~ 320 (417)
...+++.. ...+.+.. .+..++...|....+...+... ..--.++..++++|+.++.+ .-+
T Consensus 159 ~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~~~~E~ 237 (317)
T 2qyt_A 159 ELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLSLLEEV 237 (317)
T ss_dssp EEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHHHHHHH
T ss_pred ceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 33324433 33345555 7789999998642111110000 00114566677777655532 223
Q ss_pred HHHHHHcCCCHH
Q 014834 321 FRRFTENGMSED 332 (417)
Q Consensus 321 ~d~~v~~Gl~~e 332 (417)
+..+.+.|++++
T Consensus 238 ~~v~~a~G~~~~ 249 (317)
T 2qyt_A 238 AELFRAKYGQVP 249 (317)
T ss_dssp HHHHHHHTSCCC
T ss_pred HHHHHHcCCCCC
Confidence 344467788764
No 63
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.33 E-value=2.4e-12 Score=127.26 Aligned_cols=162 Identities=16% Similarity=0.076 Sum_probs=110.5
Q ss_pred hhhcccccccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC
Q 014834 92 FIVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (417)
Q Consensus 92 ~~vr~g~~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s 171 (417)
.-+|+|+|....+ ..+.| ++|||||+|+||.++|+.|+.. |++|+++++..++ ..+.+.|+.. .+
T Consensus 125 ~~~~~g~w~~~~~-~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~-----~~ 189 (313)
T 2ekl_A 125 ALAKSGIFKKIEG-LELAG-KTIGIVGFGRIGTKVGIIANAM------GMKVLAYDILDIR--EKAEKINAKA-----VS 189 (313)
T ss_dssp HHHHTTCCCCCCC-CCCTT-CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHTTCEE-----CC
T ss_pred HHHHcCCCCCCCC-CCCCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCcch--hHHHhcCcee-----cC
Confidence 4567889973333 78999 9999999999999999999998 9999877776443 2466778763 48
Q ss_pred HHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEecCchhh---hhhh---cccCCCCCccEEEeccCCCchh
Q 014834 172 IYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFLLG---HLQS---IGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~G~~i~---~~~~---~~i~~~~dv~VI~v~Pntpg~~ 243 (417)
+++++++||+|++++|.... ..++ ++..+.||+|++|+.++--.+. .+.+ .+-.-...+||+..+|.. ...
T Consensus 190 l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~-~~~ 268 (313)
T 2ekl_A 190 LEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPK-EEW 268 (313)
T ss_dssp HHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCC-SHH
T ss_pred HHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCC-Ccc
Confidence 89999999999999997664 3455 4577889999998865533221 1111 000001135778888844 332
Q ss_pred HHHHHhhcccccCCCceEEEeecCC-CCHHHHHHH
Q 014834 244 VRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVA 277 (417)
Q Consensus 244 vr~ly~~G~~~~G~Gv~~liav~~d-vsgea~e~a 277 (417)
...+|.. -+.+++||.. .|.++.+..
T Consensus 269 ~~~L~~~--------~nviltPH~~~~t~~~~~~~ 295 (313)
T 2ekl_A 269 ELELLKH--------ERVIVTTHIGAQTKEAQKRV 295 (313)
T ss_dssp HHHHHHS--------TTEEECCSCTTCSHHHHHHH
T ss_pred cchHhhC--------CCEEECCccCcCcHHHHHHH
Confidence 2345653 5688999874 444554443
No 64
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.33 E-value=3.7e-12 Score=120.99 Aligned_cols=193 Identities=15% Similarity=0.087 Sum_probs=116.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc---Cc--eecCCCcCCHHhhcCcCCEEEEcc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GF--TEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~---G~--~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
+||+|||+|+||.++|.+|.+. |++|.+++|+.++..+ .... |. .. .-...+ .++++++|+||+++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~~~~~~-l~~~~~~~~~~~~-~~~~~~-~~~~~~~d~vi~~v 71 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ------GHEVQGWLRVPQPYCS-VNLVETDGSIFNE-SLTAND-PDFLATSDLLLVTL 71 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSEEE-EEEECTTSCEEEE-EEEESC-HHHHHTCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCccceee-EEEEcCCCceeee-eeeecC-ccccCCCCEEEEEe
Confidence 5899999999999999999999 9999888776433211 1111 11 00 001223 46778999999999
Q ss_pred CCchHHHHHHHHHhcCCCCcEEE-EecCchhh-hhhhcccCCCC---C---ccEEEeccCCCchhHHHHHhhcccccCCC
Q 014834 187 SDAAQADNYEKIFSCMKPNSILG-LSHGFLLG-HLQSIGLDFPK---N---IGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~gaiLi-~a~G~~i~-~~~~~~i~~~~---d---v~VI~v~Pntpg~~vr~ly~~G~~~~G~G 258 (417)
|+....++++++.++++++++|+ +..|+... .+.+ .+++ . ....+.+| .+... +.|
T Consensus 72 ~~~~~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~---~~~~~~~g~~~~~~~~~~p-~~~~~------------~~g 135 (291)
T 1ks9_A 72 KAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQN---IQQPLLMGTTTHAARRDGN-VIIHV------------ANG 135 (291)
T ss_dssp CGGGHHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTT---CCSCEEEEEECCEEEEETT-EEEEE------------ECC
T ss_pred cHHhHHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHH---hcCCeEEEEEeEccEEcCC-EEEEe------------ccc
Confidence 99999999999999999998665 57787542 3332 3333 0 01234455 33222 356
Q ss_pred ceEEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhh-----hccccchhhhchH-----------HHHHHHHHH
Q 014834 259 INSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKS-----DIFGERGILLGAV-----------HGIVESLFR 322 (417)
Q Consensus 259 v~~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~-----dl~ge~t~L~G~~-----------pA~iea~~d 322 (417)
... +++.. .+.+..+.+..++..+|....+...+...... -.++..++|+|+. ..++.-+..
T Consensus 136 ~~~-i~~~~-~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~ 213 (291)
T 1ks9_A 136 ITH-IGPAR-QQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAA 213 (291)
T ss_dssp CEE-EEESS-GGGTTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHH
T ss_pred ceE-EccCC-CCcchHHHHHHHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHH
Confidence 544 44322 13456677889999998652221111110000 0345555665542 123444556
Q ss_pred HHHHcCCCH
Q 014834 323 RFTENGMSE 331 (417)
Q Consensus 323 ~~v~~Gl~~ 331 (417)
.+.+.|+++
T Consensus 214 va~a~G~~~ 222 (291)
T 1ks9_A 214 VIEREGHHT 222 (291)
T ss_dssp HHHHHTCCC
T ss_pred HHHHcCCCC
Confidence 677889986
No 65
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.32 E-value=7.9e-12 Score=130.04 Aligned_cols=148 Identities=16% Similarity=0.047 Sum_probs=102.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH-----cCceecCCCcCCHHhhc---CcCCEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----AGFTEENGTLGDIYETI---SGSDLVL 183 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~-----~G~~~~~~~~~s~~Ea~---~~ADIVi 183 (417)
++|||||+|+||.++|++|.+. |++|.+++|+.++. +...+ .|+.. ..+++|++ +++|+||
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~------G~~V~v~dr~~~~~-~~l~~~~~~g~gi~~----~~~~~e~v~~l~~aDvVi 71 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVSKV-DDFLANEAKGTKVLG----AHSLEEMVSKLKKPRRII 71 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTHHH-HHHHHTTTTTSSCEE----CSSHHHHHHHBCSSCEEE
T ss_pred CeEEEEChHHHHHHHHHHHHHC------CCeEEEEeCCHHHH-HHHHhccccCCCeEE----eCCHHHHHhhccCCCEEE
Confidence 5899999999999999999999 99998888875543 33343 56664 56888887 4899999
Q ss_pred EccCCc-hHHHHHHHHHhcCCCCcEEEEec-Cchh--hhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCc
Q 014834 184 LLISDA-AQADNYEKIFSCMKPNSILGLSH-GFLL--GHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGI 259 (417)
Q Consensus 184 Lavpd~-~~~~Vl~eI~~~lk~gaiLi~a~-G~~i--~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv 259 (417)
++||+. ...++++++.+++++|++|++.+ |... ..+.+ . ....++.++ .+|...+.. ... .|.
T Consensus 72 laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~-~-l~~~g~~~v-~~pv~g~~~---~a~-------~g~ 138 (482)
T 2pgd_A 72 LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCR-D-LKDKGILFV-GSGVSGGED---GAR-------YGP 138 (482)
T ss_dssp ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHH-H-HHHTTCEEE-EEEEESHHH---HHH-------HCC
T ss_pred EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH-H-HHHcCCeEe-CCCCCCChh---hhc-------cCC
Confidence 999996 66789999999999999888654 4422 12221 1 111345666 467544332 112 234
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 260 NSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 260 ~~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
.++ +.. +.++.+.+..++..+|..
T Consensus 139 -~i~-~gg--~~e~~~~v~~ll~~~g~~ 162 (482)
T 2pgd_A 139 -SLM-PGG--NKEAWPHIKAIFQGIAAK 162 (482)
T ss_dssp -EEE-EEE--CTTTHHHHHHHHHHHSCB
T ss_pred -eEE-eCC--CHHHHHHHHHHHHHhhhh
Confidence 322 233 356888899999999964
No 66
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.30 E-value=6e-11 Score=129.22 Aligned_cols=148 Identities=10% Similarity=0.084 Sum_probs=109.6
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHH-----------HHcCc-------------eecC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-----------RAAGF-------------TEEN 166 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A-----------~~~G~-------------~~~~ 166 (417)
++||+|||+|+||.+||.+|.++ |++|++++++.+. .+.+ .+.|. ..
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~~~-~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~-- 384 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK------GTPILMKDINEHG-IEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP-- 384 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT------TCCEEEECSSHHH-HHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE--
T ss_pred CCEEEEECCChhhHHHHHHHHhC------CCEEEEEECCHHH-HHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEE--
Confidence 58999999999999999999999 9999888776432 2222 22342 21
Q ss_pred CCcCCHHhhcCcCCEEEEccCCchH--HHHHHHHHhcCCCCcEEE-EecCchhhhhhhcccCCCCCccEEEeccCCCchh
Q 014834 167 GTLGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 167 ~~~~s~~Ea~~~ADIViLavpd~~~--~~Vl~eI~~~lk~gaiLi-~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~ 243 (417)
..++ +++++||+||+++|+... .+++.++.++++++++|+ .++++.+..+.+ .+...-+++..||..|...
T Consensus 385 --~~d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~---~~~~~~~~ig~hf~~P~~~ 458 (715)
T 1wdk_A 385 --TLSY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAK---ALKRPENFVGMHFFNPVHM 458 (715)
T ss_dssp --ESSS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGG---GCSCGGGEEEEECCSSTTT
T ss_pred --ECCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHH---HhcCccceEEEEccCCccc
Confidence 3455 678999999999997764 468889999999999876 567887765544 2223347999999887654
Q ss_pred HHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 244 VRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 244 vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
+. ..-+......+.+..+.+..++..+|..
T Consensus 459 ------------~~--lvevv~g~~t~~e~~~~~~~l~~~lGk~ 488 (715)
T 1wdk_A 459 ------------MP--LVEVIRGEKSSDLAVATTVAYAKKMGKN 488 (715)
T ss_dssp ------------CC--EEEEEECSSCCHHHHHHHHHHHHHTTCE
T ss_pred ------------Cc--eEEEEECCCCCHHHHHHHHHHHHHhCCE
Confidence 11 1224456667889999999999999964
No 67
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.30 E-value=2.7e-11 Score=126.05 Aligned_cols=149 Identities=16% Similarity=0.114 Sum_probs=103.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC-------ceecCCCcCCHHhhcCc---CCE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-------FTEENGTLGDIYETISG---SDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G-------~~~~~~~~~s~~Ea~~~---ADI 181 (417)
+||||||+|+||.++|++|.+. |++|.+++|+.++..+...+.| +.. ..+++|++++ +|+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~------G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~----~~~~~e~v~~l~~aDv 71 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK------GFKVAVFNRTYSKSEEFMKANASAPFAGNLKA----FETMEAFAASLKKPRK 71 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE----CSCHHHHHHHBCSSCE
T ss_pred CEEEEEChHHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEE----ECCHHHHHhcccCCCE
Confidence 5799999999999999999999 9999888886554444444446 443 5688888774 999
Q ss_pred EEEccCCc-hHHHHHHHHHhcCCCCcEEEEec-Cch--hhhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCC
Q 014834 182 VLLLISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGA 257 (417)
Q Consensus 182 ViLavpd~-~~~~Vl~eI~~~lk~gaiLi~a~-G~~--i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~ 257 (417)
||++||+. ...++++++.+.+++|++|++.+ |.. ...+.+ . ....++.++. +|...+.. ....
T Consensus 72 VilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~-~-l~~~g~~~v~-~pv~gg~~---~a~~------- 138 (478)
T 1pgj_A 72 ALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQ-Q-LEAAGLRFLG-MGISGGEE---GARK------- 138 (478)
T ss_dssp EEECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHH-H-HHTTTCEEEE-EEEESHHH---HHHH-------
T ss_pred EEEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHH-H-HHHCCCeEEE-eeccCCHH---HHhc-------
Confidence 99999996 66789999999999999887654 442 222222 1 1123455553 46544433 1122
Q ss_pred CceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 258 GINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 258 Gv~~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
|. .++ +.. +.++.+.+..++..+|..
T Consensus 139 g~-~i~-~gg--~~~~~~~v~~ll~~~g~~ 164 (478)
T 1pgj_A 139 GP-AFF-PGG--TLSVWEEIRPIVEAAAAK 164 (478)
T ss_dssp CC-EEE-EEE--CHHHHHHHHHHHHHHSCB
T ss_pred CC-eEe-ccC--CHHHHHHHHHHHHHhccc
Confidence 34 323 233 468899999999999964
No 68
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.29 E-value=9.1e-12 Score=122.75 Aligned_cols=159 Identities=18% Similarity=0.096 Sum_probs=108.8
Q ss_pred hhccccccc-ccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC
Q 014834 93 IVRGGRDLF-KLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (417)
Q Consensus 93 ~vr~g~~~f-~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s 171 (417)
-+|+|+|.. ......+.| ++|||||+|+||.++|+.|+.. |++|+++++...+ +.+.+.|+.. .+
T Consensus 124 ~~~~g~w~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~-----~~ 189 (307)
T 1wwk_A 124 KMREGVWAKKEAMGIELEG-KTIGIIGFGRIGYQVAKIANAL------GMNILLYDPYPNE--ERAKEVNGKF-----VD 189 (307)
T ss_dssp HHTTTCCCTTTCCBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHTTCEE-----CC
T ss_pred HHHcCCCCccCcCCcccCC-ceEEEEccCHHHHHHHHHHHHC------CCEEEEECCCCCh--hhHhhcCccc-----cC
Confidence 467889963 122378999 9999999999999999999988 9999877776443 4566778763 48
Q ss_pred HHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEecCchh-------hhhhhcccCCCCCccEEEeccCCCch
Q 014834 172 IYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFLL-------GHLQSIGLDFPKNIGVIAVCPKGMGP 242 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~G~~i-------~~~~~~~i~~~~dv~VI~v~Pntpg~ 242 (417)
+++++++||+|++++|.... ..++ ++..+.||+|++|+.++--.+ ..+.+ +......+||+..+|..+.+
T Consensus 190 l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~-g~i~ga~lDv~~~eP~~~~~ 268 (307)
T 1wwk_A 190 LETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKE-GWIAGAGLDVFEEEPLPKDH 268 (307)
T ss_dssp HHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHH-TSSSEEEESCCSSSSCCTTC
T ss_pred HHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHh-CCCcEEEEecCCCCCCCCCC
Confidence 99999999999999998664 4555 357788999999886553221 12222 11111245677777753322
Q ss_pred hHHHHHhhcccccCCCceEEEeecCC-CCHHHHHHH
Q 014834 243 SVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVA 277 (417)
Q Consensus 243 ~vr~ly~~G~~~~G~Gv~~liav~~d-vsgea~e~a 277 (417)
.+|. .-+.+++||.. .|.++.+..
T Consensus 269 ---~L~~--------~~nviltPh~~~~t~~~~~~~ 293 (307)
T 1wwk_A 269 ---PLTK--------FDNVVLTPHIGASTVEAQERA 293 (307)
T ss_dssp ---GGGG--------CTTEEECSSCTTCBHHHHHHH
T ss_pred ---hHHh--------CCCEEECCccccCcHHHHHHH
Confidence 2333 35788999874 344554443
No 69
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.27 E-value=9.4e-11 Score=122.57 Aligned_cols=149 Identities=17% Similarity=0.069 Sum_probs=103.3
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC-----ceecCCCcCCHHhhcC---cCCEE
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-----FTEENGTLGDIYETIS---GSDLV 182 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G-----~~~~~~~~~s~~Ea~~---~ADIV 182 (417)
+++|||||+|+||.++|++|.+. |++|++++|+.++. +...+.| +.. ..+++|+++ ++|+|
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~------G~~V~v~dr~~~~~-~~l~~~g~~g~~i~~----~~s~~e~v~~l~~aDvV 72 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVSKV-DDFLANEAKGTKVVG----AQSLKEMVSKLKKPRRI 72 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTHHH-HHHHHTTTTTSSCEE----CSSHHHHHHTBCSSCEE
T ss_pred CCEEEEEChhHHHHHHHHHHHHC------CCEEEEEeCCHHHH-HHHHhcccCCCceec----cCCHHHHHhhccCCCEE
Confidence 37899999999999999999999 99999888876543 3444332 221 367888876 59999
Q ss_pred EEccCCc-hHHHHHHHHHhcCCCCcEEEEecCchh---hhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCC
Q 014834 183 LLLISDA-AQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (417)
Q Consensus 183 iLavpd~-~~~~Vl~eI~~~lk~gaiLi~a~G~~i---~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~G 258 (417)
|+++|+. ...++++++.++|++|++|++.+.... ....+ .....++.++.. |-.-+.. .-+. |
T Consensus 73 il~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~--~l~~~Gi~fvd~-pVsGg~~---gA~~-------G 139 (484)
T 4gwg_A 73 ILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCR--DLKAKGILFVGS-GVSGGEE---GARY-------G 139 (484)
T ss_dssp EECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEEE-EEESHHH---HHHH-------C
T ss_pred EEecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHH--HHHhhccccccC-CccCCHH---HHhc-------C
Confidence 9999996 567899999999999999998776532 11111 011245667653 5222221 2223 2
Q ss_pred ceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 259 INSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 259 v~~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
. + +.+.. +.++.+.++.++..+|..
T Consensus 140 ~-~-im~GG--~~ea~~~v~pll~~ig~~ 164 (484)
T 4gwg_A 140 P-S-LMPGG--NKEAWPHIKTIFQGIAAK 164 (484)
T ss_dssp C-E-EEEEE--CGGGHHHHHHHHHHHSCB
T ss_pred C-e-eecCC--CHHHHHHHHHHHHHhcCc
Confidence 3 3 33444 358899999999999964
No 70
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.26 E-value=2.8e-10 Score=117.95 Aligned_cols=208 Identities=13% Similarity=0.075 Sum_probs=129.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH-----------cCceec-------CCCcCCH
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-------NGTLGDI 172 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~-----------~G~~~~-------~~~~~s~ 172 (417)
++||+|||+|.||.++|..|... |++|++++++.+ ..+.+.+ .|.... .....+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~------G~~V~l~D~~~~-~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 109 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV------GISVVAVESDPK-QLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST 109 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSHH-HHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC------CCeEEEEECCHH-HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH
Confidence 58999999999999999999999 999988776543 2333221 121000 0012455
Q ss_pred HhhcCcCCEEEEccCCchH--HHHHHHHHhcCCCCcEEEE-ecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHHh
Q 014834 173 YETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILGL-SHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYV 249 (417)
Q Consensus 173 ~Ea~~~ADIViLavpd~~~--~~Vl~eI~~~lk~gaiLi~-a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~ 249 (417)
+++++||+||+++|.... .+++.++.++++++++|+. ++++.+..+.. .+...-+++..||-.|...
T Consensus 110 -~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~la~---~~~~~~~~ig~hf~~P~~~------ 179 (463)
T 1zcj_A 110 -KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS---STDRPQLVIGTHFFSPAHV------ 179 (463)
T ss_dssp -GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTTT------
T ss_pred -HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHHHH---HhcCCcceEEeecCCCccc------
Confidence 578899999999998753 5688899999999998764 45566655543 2233357899999777544
Q ss_pred hcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchH-HHHHHHHHHHHHHcC
Q 014834 250 QGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAV-HGIVESLFRRFTENG 328 (417)
Q Consensus 250 ~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~-pA~iea~~d~~v~~G 328 (417)
+-..-+......+.+..+.+..++..+|... +... . ..-| +++-+ .+++..++ .+++.|
T Consensus 180 --------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~-v~v~---~--~~gf-----i~Nrll~~~~~ea~-~l~~~G 239 (463)
T 1zcj_A 180 --------MRLLEVIPSRYSSPTTIATVMSLSKKIGKIG-VVVG---N--CYGF-----VGNRMLAPYYNQGF-FLLEEG 239 (463)
T ss_dssp --------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEE-EEBC---C--STTT-----THHHHHHHHHHHHH-HHHHTT
T ss_pred --------ceeEEEeCCCCCCHHHHHHHHHHHHHhCCEE-EEEC---C--CccH-----HHHHHHHHHHHHHH-HHHHcC
Confidence 1122244566678899999999999999642 1110 1 1112 33322 22333333 345669
Q ss_pred CCHHHHHHHHHHH--HHHHHHHHHHHhcHH
Q 014834 329 MSEDLAYKNTVEC--ITGIISKIISTQGML 356 (417)
Q Consensus 329 l~~e~A~~~~~q~--~~~g~~~li~e~G~~ 356 (417)
+++++.....-.. -. |-..+.-..|++
T Consensus 240 ~~~~~id~~~~~~g~p~-Gp~~l~D~~GlD 268 (463)
T 1zcj_A 240 SKPEDVDGVLEEFGFKM-GPFRVSDLAGLD 268 (463)
T ss_dssp CCHHHHHHHHHHHTCSS-CHHHHHHHHCHH
T ss_pred CCHHHHHHHHHHcCCCC-cHHHHHHHcchH
Confidence 9998765543211 01 334455555663
No 71
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.26 E-value=5.9e-12 Score=124.77 Aligned_cols=161 Identities=16% Similarity=0.147 Sum_probs=106.8
Q ss_pred hhhcccccc-cc---cchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEec-CChhhHHHHHHcCceecC
Q 014834 92 FIVRGGRDL-FK---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFTEEN 166 (417)
Q Consensus 92 ~~vr~g~~~-f~---~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r-~~s~s~~~A~~~G~~~~~ 166 (417)
.-+|+|+|. +. .....+.| ++|||||+|+||.++|+.|+.. |++|+++++ ...+ ..+.+.|+..
T Consensus 124 ~~~~~g~w~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~--~~~~~~g~~~-- 192 (320)
T 1gdh_A 124 KMIRTRSWPGWEPLELVGEKLDN-KTLGIYGFGSIGQALAKRAQGF------DMDIDYFDTHRASS--SDEASYQATF-- 192 (320)
T ss_dssp HHHHTTCCCCCCTTTTCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSCCCH--HHHHHHTCEE--
T ss_pred HHHHcCCCCccccccccCcCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCcCh--hhhhhcCcEE--
Confidence 456788895 21 12368999 9999999999999999999988 999988777 5433 3556678764
Q ss_pred CCcCCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec-Cc--hhh----hhhhcccCCCCCccEEEecc
Q 014834 167 GTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GF--LLG----HLQSIGLDFPKNIGVIAVCP 237 (417)
Q Consensus 167 ~~~~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~-G~--~i~----~~~~~~i~~~~dv~VI~v~P 237 (417)
..+++|++++||+|++++|.... ..++ ++..+.||+|++|+.++ |- ... .+.+ +......+||+..+|
T Consensus 193 --~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~-g~i~gA~lDv~~~eP 269 (320)
T 1gdh_A 193 --HDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEA-GRLAYAGFDVFAGEP 269 (320)
T ss_dssp --CSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHH-TSEEEEEESCCTTTT
T ss_pred --cCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHh-CCCcEEEEeCCCCCC
Confidence 44789999999999999997653 4566 35778999999988554 42 111 1211 100012345565667
Q ss_pred CCCchhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHHHH
Q 014834 238 KGMGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVAL 278 (417)
Q Consensus 238 ntpg~~vr~ly~~G~~~~G~Gv~~liav~~d-vsgea~e~a~ 278 (417)
.+. ..+|. .-+.+++||.. .|.++.+...
T Consensus 270 -~~~---~~L~~--------~~nviltPH~~~~t~~~~~~~~ 299 (320)
T 1gdh_A 270 -NIN---EGYYD--------LPNTFLFPHIGSAATQAREDMA 299 (320)
T ss_dssp -SCC---TTGGG--------CTTEEECSSCTTCBHHHHHHHH
T ss_pred -CCC---Chhhh--------CCCEEECCcCCcCcHHHHHHHH
Confidence 222 12443 35788999874 3445544443
No 72
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.23 E-value=1.2e-11 Score=114.64 Aligned_cols=138 Identities=17% Similarity=0.168 Sum_probs=91.5
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
..+.+ +||+|||+|+||.++|..|.+. |++|++++|... ++++||+||++
T Consensus 15 ~~~~~-~~I~iiG~G~mG~~la~~l~~~------g~~V~~~~~~~~-----------------------~~~~aD~vi~a 64 (209)
T 2raf_A 15 LYFQG-MEITIFGKGNMGQAIGHNFEIA------GHEVTYYGSKDQ-----------------------ATTLGEIVIMA 64 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCC-----------------------CSSCCSEEEEC
T ss_pred cccCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH-----------------------HhccCCEEEEc
Confidence 55667 8999999999999999999999 999887766432 35689999999
Q ss_pred cCCchHHHHHHHHHhcCCCCcEEE-EecCch---------------hhhhhhcccCCCCCccEEE-eccCCCchhHHHHH
Q 014834 186 ISDAAQADNYEKIFSCMKPNSILG-LSHGFL---------------LGHLQSIGLDFPKNIGVIA-VCPKGMGPSVRRLY 248 (417)
Q Consensus 186 vpd~~~~~Vl~eI~~~lk~gaiLi-~a~G~~---------------i~~~~~~~i~~~~dv~VI~-v~Pntpg~~vr~ly 248 (417)
+|+....++++++.+.++ +++|+ .+.|+. ...+.+ .+| +.+++. ++|. .++.....-
T Consensus 65 v~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~---~l~-~~~vv~~~~~~-~~p~~~~~~ 138 (209)
T 2raf_A 65 VPYPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQ---QLP-DSQVLKAFNTT-FAATLQSGQ 138 (209)
T ss_dssp SCHHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHH---HCT-TSEEEECSTTS-CHHHHHHSE
T ss_pred CCcHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHH---HCC-CCcEEEeeecc-cHhhccccc
Confidence 998888899999988888 88776 456665 233333 334 467888 4442 222211111
Q ss_pred hhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCC
Q 014834 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (417)
Q Consensus 249 ~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~ 286 (417)
.. |.+...++ +.. .+.++.+.+.+++..+|.
T Consensus 139 ~~-----g~~~~~~~-~~g-~~~~~~~~v~~ll~~~G~ 169 (209)
T 2raf_A 139 VN-----GKEPTTVL-VAG-NDDSAKQRFTRALADSPL 169 (209)
T ss_dssp ET-----TTEECEEE-EEE-SCHHHHHHHHHHTTTSSC
T ss_pred cC-----CCCCceeE-EcC-CCHHHHHHHHHHHHHcCC
Confidence 11 11222322 222 256888999999999985
No 73
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.23 E-value=6.6e-11 Score=115.64 Aligned_cols=152 Identities=20% Similarity=0.153 Sum_probs=103.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecC--C--------CcCCHHhhcCcCCE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN--G--------TLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~--~--------~~~s~~Ea~~~ADI 181 (417)
+||+|||+|+||.++|..|.++ |.+|.++.|.. .+..++.|+.... + .+.+.+ .+..+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~---~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~-~~~~~D~ 72 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS------GEDVHFLLRRD---YEAIAGNGLKVFSINGDFTLPHVKGYRAPE-EIGPMDL 72 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT------SCCEEEECSTT---HHHHHHTCEEEEETTCCEEESCCCEESCHH-HHCCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCc---HHHHHhCCCEEEcCCCeEEEeeceeecCHH-HcCCCCE
Confidence 6899999999999999999999 99998887753 3555567764310 1 013444 4688999
Q ss_pred EEEccCCchHHHHHHHHHhcCCCCcEE-EEecCch-hhhhhhcccCCCCCccEEEec------cCCCchhHHHHHhhccc
Q 014834 182 VLLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFL-LGHLQSIGLDFPKNIGVIAVC------PKGMGPSVRRLYVQGKE 253 (417)
Q Consensus 182 ViLavpd~~~~~Vl~eI~~~lk~gaiL-i~a~G~~-i~~~~~~~i~~~~dv~VI~v~------Pntpg~~vr~ly~~G~~ 253 (417)
||++||+....+++++|.++++++++| ++..|+. ...+.+ .+|++ +++..+ -.+|+.+. .
T Consensus 73 vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~---~~~~~-~v~~~~~~~~a~~~~p~~v~-----~--- 140 (312)
T 3hn2_A 73 VLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEEALAT---LFGAE-RIIGGVAFLCSNRGEPGEVH-----H--- 140 (312)
T ss_dssp EEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHH---HTCGG-GEEEEEEEEECCBCSSSEEE-----E---
T ss_pred EEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHH---HCCCC-cEEEEEEEeeeEEcCCcEEE-----E---
Confidence 999999999999999999999998865 4778985 444543 34443 455433 23455541 1
Q ss_pred ccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 254 INGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 254 ~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
.|.|... ++.....+.+..+...+++...|..
T Consensus 141 -~~~g~~~-ig~~~~~~~~~~~~l~~~l~~~g~~ 172 (312)
T 3hn2_A 141 -LGAGRII-LGEFLPRDTGRIEELAAMFRQAGVD 172 (312)
T ss_dssp -CEEEEEE-EEESSCCCSHHHHHHHHHHHHTTCC
T ss_pred -CCCCeEE-EecCCCCccHHHHHHHHHHHhCCCC
Confidence 1344443 4433333345666777888888865
No 74
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.20 E-value=3.3e-11 Score=120.83 Aligned_cols=104 Identities=20% Similarity=0.255 Sum_probs=75.6
Q ss_pred hhhhcccccccc----cchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecC
Q 014834 91 EFIVRGGRDLFK----LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN 166 (417)
Q Consensus 91 e~~vr~g~~~f~----~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~ 166 (417)
+.-+|+|+|... .+ ..+.| |||||||+|+||.++|+.|+.. |++|+++++...+ ..++..
T Consensus 149 ~~~~~~g~W~~~~~~~~~-~~l~g-ktiGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~------~~~~~~-- 212 (340)
T 4dgs_A 149 DRLVREGRWAAGEQLPLG-HSPKG-KRIGVLGLGQIGRALASRAEAF------GMSVRYWNRSTLS------GVDWIA-- 212 (340)
T ss_dssp HHHHHTTCC------CCC-CCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSCCT------TSCCEE--
T ss_pred HHHHhcCCcccccCcCcc-ccccC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCccc------ccCcee--
Confidence 345688999753 23 78999 9999999999999999999988 9999877775432 234443
Q ss_pred CCcCCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 167 GTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 167 ~~~~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
..+++|++++||+|++++|.... ..++ +++++.||+|++|+.++
T Consensus 213 --~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~a 258 (340)
T 4dgs_A 213 --HQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVA 258 (340)
T ss_dssp --CSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECS
T ss_pred --cCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECC
Confidence 56899999999999999996655 4566 46888999999988655
No 75
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.20 E-value=2.4e-11 Score=122.22 Aligned_cols=107 Identities=21% Similarity=0.216 Sum_probs=85.4
Q ss_pred hhccccccccc-----------chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC
Q 014834 93 IVRGGRDLFKL-----------LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG 161 (417)
Q Consensus 93 ~vr~g~~~f~~-----------~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G 161 (417)
-+|+|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++. ...+.+.+.|
T Consensus 132 ~~~~g~W~~~~~~~~~~~~~~~~~~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~--~~~~~~~~~g 202 (352)
T 3gg9_A 132 SLKHGAWQQSGLKSTTMPPNFGIGRVLKG-QTLGIFGYGKIGQLVAGYGRAF------GMNVLVWGRE--NSKERARADG 202 (352)
T ss_dssp HHHTTCTTCCCCCCTTSCTTTTSBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSH--HHHHHHHHTT
T ss_pred HHHcCCCCcccccccccccccccCccCCC-CEEEEEeECHHHHHHHHHHHhC------CCEEEEECCC--CCHHHHHhcC
Confidence 35778886531 2378999 9999999999999999999988 9999877664 2345667788
Q ss_pred ceecCCCcCCHHhhcCcCCEEEEccCCchH-HHHHH-HHHhcCCCCcEEEEec
Q 014834 162 FTEENGTLGDIYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH 212 (417)
Q Consensus 162 ~~~~~~~~~s~~Ea~~~ADIViLavpd~~~-~~Vl~-eI~~~lk~gaiLi~a~ 212 (417)
+.. +.+++|++++||+|++++|.... ..++. +.++.||+|++|+.++
T Consensus 203 ~~~----~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 251 (352)
T 3gg9_A 203 FAV----AESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTS 251 (352)
T ss_dssp CEE----CSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred ceE----eCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECC
Confidence 874 55899999999999999997654 34553 6788999999999766
No 76
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.20 E-value=2.1e-11 Score=121.73 Aligned_cols=105 Identities=20% Similarity=0.129 Sum_probs=83.0
Q ss_pred hhcccccccc--cchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcC
Q 014834 93 IVRGGRDLFK--LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (417)
Q Consensus 93 ~vr~g~~~f~--~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~ 170 (417)
-+|+|+|.+. .....|.| ++|||||+|+||.++|+.|+.. |++|+++++...... .+.|+. ..
T Consensus 122 ~~~~g~w~~~~~~~~~~l~g-~tvgIiG~G~IG~~vA~~l~~~------G~~V~~~d~~~~~~~---~~~g~~-----~~ 186 (334)
T 2pi1_A 122 RVKKLNFSQDSEILARELNR-LTLGVIGTGRIGSRVAMYGLAF------GMKVLCYDVVKREDL---KEKGCV-----YT 186 (334)
T ss_dssp HHTTTCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCHHH---HHTTCE-----EC
T ss_pred HHHcCCCccccCccceeccC-ceEEEECcCHHHHHHHHHHHHC------cCEEEEECCCcchhh---HhcCce-----ec
Confidence 4678899765 12478999 9999999999999999999988 999988777644321 246776 35
Q ss_pred CHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 171 s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
+++|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 187 ~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 230 (334)
T 2pi1_A 187 SLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTA 230 (334)
T ss_dssp CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECC
Confidence 699999999999999997544 3455 36788899999999665
No 77
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.20 E-value=3.4e-11 Score=120.38 Aligned_cols=158 Identities=16% Similarity=0.079 Sum_probs=108.8
Q ss_pred hhhccccccccc-chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcC
Q 014834 92 FIVRGGRDLFKL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (417)
Q Consensus 92 ~~vr~g~~~f~~-~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~ 170 (417)
.-+|+|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++..++ +.+.+.|+. ..
T Consensus 146 ~~~~~g~W~~~~~~~~~l~g-~tvgIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~-----~~ 211 (335)
T 2g76_A 146 ASMKDGKWERKKFMGTELNG-KTLGILGLGRIGREVATRMQSF------GMKTIGYDPIISP--EVSASFGVQ-----QL 211 (335)
T ss_dssp HHHHTTCCCTGGGCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSSCH--HHHHHTTCE-----EC
T ss_pred HHHHcCCCCccCCCCcCCCc-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCcch--hhhhhcCce-----eC
Confidence 346788996432 2368999 9999999999999999999988 9999877765433 356677876 35
Q ss_pred CHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEecCchh-------hhhhhcccCCCCCccEEEeccCCCc
Q 014834 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFLL-------GHLQSIGLDFPKNIGVIAVCPKGMG 241 (417)
Q Consensus 171 s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~G~~i-------~~~~~~~i~~~~dv~VI~v~Pntpg 241 (417)
+++|++++||+|++++|.... ..++ +++++.||+|++|+.++--.+ ..+.+ +..-...+||+..+|. +.
T Consensus 212 ~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~-g~i~gA~lDV~~~EP~-~~ 289 (335)
T 2g76_A 212 PLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQS-GQCAGAALDVFTEEPP-RD 289 (335)
T ss_dssp CHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHH-TSEEEEEESCCSSSSC-SC
T ss_pred CHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHh-CCccEEEEeecCCCCC-CC
Confidence 899999999999999998764 4566 468889999999986654322 11211 1000113467777883 22
Q ss_pred hhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHH
Q 014834 242 PSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV 276 (417)
Q Consensus 242 ~~vr~ly~~G~~~~G~Gv~~liav~~d-vsgea~e~ 276 (417)
..+|.. -+.+++||.. .|.++.+.
T Consensus 290 ---~~L~~~--------~nvilTPH~~~~t~e~~~~ 314 (335)
T 2g76_A 290 ---RALVDH--------ENVISCPHLGASTKEAQSR 314 (335)
T ss_dssp ---CHHHHS--------TTEEECSSCTTCBHHHHHH
T ss_pred ---chHHhC--------CCEEECCcCCCCCHHHHHH
Confidence 234442 5688898863 44454443
No 78
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.19 E-value=5.9e-11 Score=110.34 Aligned_cols=149 Identities=18% Similarity=0.173 Sum_probs=100.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCchH
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~~ 191 (417)
+||+|||+|+||.+++.+|.+. |++|++++|+.+ ..+...+.|+.. .+.+++++++|+||+++|+...
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~------g~~V~~~~r~~~-~~~~~~~~g~~~-----~~~~~~~~~~DvVi~av~~~~~ 96 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS------GFKVVVGSRNPK-RTARLFPSAAQV-----TFQEEAVSSPEVIFVAVFREHY 96 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSHH-HHHHHSBTTSEE-----EEHHHHTTSCSEEEECSCGGGS
T ss_pred CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHcCCce-----ecHHHHHhCCCEEEECCChHHH
Confidence 7899999999999999999998 999888777633 333343446663 3788899999999999998776
Q ss_pred HHHHHHHHhcCCCCcEEE-EecCchhhhh----------hhcccCCCCCccEEEeccCCCchhHHHHHhhcccccCCCce
Q 014834 192 ADNYEKIFSCMKPNSILG-LSHGFLLGHL----------QSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGIN 260 (417)
Q Consensus 192 ~~Vl~eI~~~lk~gaiLi-~a~G~~i~~~----------~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~~~~G~Gv~ 260 (417)
.++++ +.+.+ ++++|+ .+.|..+..+ .+ .+| +.+|++.+ |+..... ...|-. .|-+
T Consensus 97 ~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~---~l~-~~~vv~~~-n~~~~~~---~~~~~~---~g~~ 163 (215)
T 2vns_A 97 SSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLAS---LFP-TCTVVKAF-NVISAWT---LQAGPR---DGNR 163 (215)
T ss_dssp GGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHH---HCT-TSEEEEEC-TTBCHHH---HHTCSC---SSCC
T ss_pred HHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHH---HCC-CCeEEecc-ccccHhH---hccccc---CCce
Confidence 66765 66666 788766 5667754322 12 234 45788877 4433221 111110 1222
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 261 SSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 261 ~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
.++... .+.++.+.+..++..+|..
T Consensus 164 ~~~~~g--~~~~~~~~v~~ll~~~G~~ 188 (215)
T 2vns_A 164 QVPICG--DQPEAKRAVSEMALAMGFM 188 (215)
T ss_dssp EEEEEE--SCHHHHHHHHHHHHHTTCE
T ss_pred eEEEec--CCHHHHHHHHHHHHHcCCc
Confidence 222223 2578899999999999964
No 79
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.18 E-value=6.2e-10 Score=114.02 Aligned_cols=200 Identities=12% Similarity=0.102 Sum_probs=119.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH-------------------cC-ceecCCCcCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~-------------------~G-~~~~~~~~~s 171 (417)
+||+|||+|.||.++|..|.+. |++|++.+++.++ .+...+ .| +.. ..+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~------G~~V~~~d~~~~~-~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~----t~~ 69 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR------GHEVIGVDVSSTK-IDLINQGKSPIVEPGLEALLQQGRQTGRLSG----TTD 69 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSCHHH-HHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----ESC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEECCHHH-HHHHhCCCCCcCCCCHHHHHHhhcccCceEE----eCC
Confidence 5899999999999999999999 9998877665333 333332 23 332 457
Q ss_pred HHhhcCcCCEEEEccCCch----------HHHHHHHHHhcCCC---CcEEEEecCchhhh----h----hhc-ccCCCCC
Q 014834 172 IYETISGSDLVLLLISDAA----------QADNYEKIFSCMKP---NSILGLSHGFLLGH----L----QSI-GLDFPKN 229 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd~~----------~~~Vl~eI~~~lk~---gaiLi~a~G~~i~~----~----~~~-~i~~~~d 229 (417)
+++++++||+||+++|... ..+++++|.+++++ +++|++.+++.... + ... +.....+
T Consensus 70 ~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~ 149 (436)
T 1mv8_A 70 FKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVD 149 (436)
T ss_dssp HHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTT
T ss_pred HHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCc
Confidence 8888999999999998655 67888899999999 89888765543221 1 110 1111122
Q ss_pred ccEEEeccCC--CchhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccch
Q 014834 230 IGVIAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERG 307 (417)
Q Consensus 230 v~VI~v~Pnt--pg~~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t 307 (417)
.. +...|.. |+..+.+.+... ..++. .+ ++++.+.+..++..+|.. ++.+.... .+...+.+.+
T Consensus 150 ~~-v~~~Pe~~~~G~~~~~~~~~~--------~iv~G--~~-~~~~~~~~~~l~~~~~~~-v~~~~~~~-ae~~Kl~~N~ 215 (436)
T 1mv8_A 150 FG-VGTNPEFLRESTAIKDYDFPP--------MTVIG--EL-DKQTGDLLEEIYRELDAP-IIRKTVEV-AEMIKYTCNV 215 (436)
T ss_dssp BE-EEECCCCCCTTSHHHHHHSCS--------CEEEE--ES-SHHHHHHHHHHHTTSSSC-EEEEEHHH-HHHHHHHHHH
T ss_pred EE-EEECcccccccccchhccCCC--------EEEEE--cC-CHHHHHHHHHHHhccCCC-EEcCCHHH-HHHHHHHHHH
Confidence 23 3445543 333332222211 12222 22 578889999999999864 22232111 0100111111
Q ss_pred hhhchHHHHHHHHHHHHHHcCCCHHHHHHH
Q 014834 308 ILLGAVHGIVESLFRRFTENGMSEDLAYKN 337 (417)
Q Consensus 308 ~L~G~~pA~iea~~d~~v~~Gl~~e~A~~~ 337 (417)
.....-+++..+...+.+.|+++++....
T Consensus 216 -~~a~~ia~~nE~~~l~~~~Gid~~~v~~~ 244 (436)
T 1mv8_A 216 -WHAAKVTFANEIGNIAKAVGVDGREVMDV 244 (436)
T ss_dssp -HHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 11112245666777888999998766553
No 80
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.18 E-value=2.1e-11 Score=121.47 Aligned_cols=108 Identities=19% Similarity=0.283 Sum_probs=84.3
Q ss_pred hhhcccccc-cc--cchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCC
Q 014834 92 FIVRGGRDL-FK--LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (417)
Q Consensus 92 ~~vr~g~~~-f~--~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~ 168 (417)
.-+|+|+|. +. .....+.| ++|||||+|+||.++|+.|+.. |++|+++++.. ...+.+.+.|+.
T Consensus 124 ~~~~~g~w~~~~~~~~~~~l~g-~tvGIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~-~~~~~~~~~g~~----- 190 (330)
T 4e5n_A 124 AFVRSGKFRGWQPRFYGTGLDN-ATVGFLGMGAIGLAMADRLQGW------GATLQYHEAKA-LDTQTEQRLGLR----- 190 (330)
T ss_dssp HHHHTTCCCSCCSCCCCCCSTT-CEEEEECCSHHHHHHHHHTTTS------CCEEEEECSSC-CCHHHHHHHTEE-----
T ss_pred HHHHhCCccccCccccCCccCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCC-CcHhHHHhcCce-----
Confidence 346788886 22 12367999 9999999999999999999988 99988777653 234556667876
Q ss_pred cCCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 169 LGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 169 ~~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
..+++|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 191 ~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 236 (330)
T 4e5n_A 191 QVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPC 236 (330)
T ss_dssp ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred eCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECC
Confidence 35899999999999999996544 3455 46889999999998665
No 81
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.17 E-value=3.7e-11 Score=120.85 Aligned_cols=109 Identities=15% Similarity=0.146 Sum_probs=86.2
Q ss_pred hhhccccccccc---chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCC
Q 014834 92 FIVRGGRDLFKL---LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (417)
Q Consensus 92 ~~vr~g~~~f~~---~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~ 168 (417)
.-+|+|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++.. ...+.+.+.|+..
T Consensus 143 ~~~~~g~W~~~~~~~~~~~l~g-ktvGIIG~G~IG~~vA~~l~~~------G~~V~~~dr~~-~~~~~~~~~g~~~---- 210 (351)
T 3jtm_A 143 NQVVKGEWNVAGIAYRAYDLEG-KTIGTVGAGRIGKLLLQRLKPF------GCNLLYHDRLQ-MAPELEKETGAKF---- 210 (351)
T ss_dssp HHHHTTCCCHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHGGG------CCEEEEECSSC-CCHHHHHHHCCEE----
T ss_pred HHHHcCCCccccccCCcccccC-CEEeEEEeCHHHHHHHHHHHHC------CCEEEEeCCCc-cCHHHHHhCCCeE----
Confidence 346789997532 2367999 9999999999999999999988 99988777653 3355666778874
Q ss_pred cCCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 169 LGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 169 ~~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
+.+++|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 211 ~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 256 (351)
T 3jtm_A 211 VEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNA 256 (351)
T ss_dssp CSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECS
T ss_pred cCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECc
Confidence 56899999999999999996543 4455 46788899999999665
No 82
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.17 E-value=2.7e-11 Score=118.91 Aligned_cols=102 Identities=15% Similarity=0.145 Sum_probs=81.6
Q ss_pred hhcccccccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCH
Q 014834 93 IVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (417)
Q Consensus 93 ~vr~g~~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~ 172 (417)
-+|+|+|.+... ..+.| +||||||+|+||.++|+.|+.. |++|+++++...+. ..+.. ..++
T Consensus 106 ~~~~g~w~~~~~-~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~------~~~~~----~~~l 167 (290)
T 3gvx_A 106 LMKAGIFRQSPT-TLLYG-KALGILGYGGIGRRVAHLAKAF------GMRVIAYTRSSVDQ------NVDVI----SESP 167 (290)
T ss_dssp HHHTTCCCCCCC-CCCTT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSCCCT------TCSEE----CSSH
T ss_pred HhhhcccccCCc-eeeec-chheeeccCchhHHHHHHHHhh------CcEEEEEecccccc------ccccc----cCCh
Confidence 367889987654 78999 9999999999999999999998 99998877754321 11332 4589
Q ss_pred HhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 173 YETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 173 ~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
+|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 168 ~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 209 (290)
T 3gvx_A 168 ADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVA 209 (290)
T ss_dssp HHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECS
T ss_pred HHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEee
Confidence 9999999999999997554 4455 46889999999999766
No 83
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.17 E-value=1.1e-09 Score=119.47 Aligned_cols=208 Identities=11% Similarity=0.065 Sum_probs=128.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH-----------cCceec-------C--CCcC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-------N--GTLG 170 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~-----------~G~~~~-------~--~~~~ 170 (417)
|+||+|||+|.||.+||.+|.+. |++|++++++.+. .+.+.+ .|.... + ....
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~~~-~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~ 384 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS------NYPVILKEVNEKF-LEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSL 384 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHHH-HHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEES
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC------CCEEEEEECCHHH-HHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeC
Confidence 58999999999999999999999 9999888776432 222211 231100 0 0123
Q ss_pred CHHhhcCcCCEEEEccCCchH--HHHHHHHHhcCCCCcEEE-EecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHH
Q 014834 171 DIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRL 247 (417)
Q Consensus 171 s~~Ea~~~ADIViLavpd~~~--~~Vl~eI~~~lk~gaiLi-~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~l 247 (417)
++ +++++||+||+++|+... .+++.++.++++++++|+ .++++.+..+.+ .....-+++..|+--|...
T Consensus 385 d~-~~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~---~~~~p~~~iG~hf~~P~~~---- 456 (725)
T 2wtb_A 385 DY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGE---RTKSQDRIVGAHFFSPAHI---- 456 (725)
T ss_dssp SS-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTT---TCSCTTTEEEEEECSSTTT----
T ss_pred CH-HHHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHH---HhcCCCCEEEecCCCCccc----
Confidence 55 678999999999998764 468889999999999875 567777765543 2222236888888666543
Q ss_pred HhhcccccCCCce-EEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhc-hHHHHHHHHHHHHH
Q 014834 248 YVQGKEINGAGIN-SSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLG-AVHGIVESLFRRFT 325 (417)
Q Consensus 248 y~~G~~~~G~Gv~-~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G-~~pA~iea~~d~~v 325 (417)
++ .-+......+.+..+.+..++..+|... +... +. ..-+++ .+.+++..+.. ++
T Consensus 457 -----------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~-v~v~---d~-------~Gfi~Nril~~~~~Ea~~-l~ 513 (725)
T 2wtb_A 457 -----------MPLLEIVRTNHTSAQVIVDLLDVGKKIKKTP-VVVG---NC-------TGFAVNRMFFPYTQAAMF-LV 513 (725)
T ss_dssp -----------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEE-EEEE---SS-------TTTTHHHHHHHHHHHHHH-HH
T ss_pred -----------CceEEEEECCCCCHHHHHHHHHHHHHhCCEE-EEEC---CC-------ccHHHHHHHHHHHHHHHH-HH
Confidence 22 2244466678899999999999999642 2110 11 111223 22233333333 44
Q ss_pred HcCCCHHHHHHHHHHHHH--HHHHHHHHHhcHHH
Q 014834 326 ENGMSEDLAYKNTVECIT--GIISKIISTQGMLA 357 (417)
Q Consensus 326 ~~Gl~~e~A~~~~~q~~~--~g~~~li~e~G~~~ 357 (417)
+.|+++++..... ...- -|--.++-..|++.
T Consensus 514 ~~G~~~e~id~~~-~~~g~p~Gp~~l~D~vGld~ 546 (725)
T 2wtb_A 514 ECGADPYLIDRAI-SKFGMPMGPFRLCDLVGFGV 546 (725)
T ss_dssp HTTCCHHHHHHHH-HHHTCSSCHHHHHHHHCHHH
T ss_pred HCCCCHHHHHHHH-HHcCCCCCHHHHHHHhchHH
Confidence 5599998776654 2210 12334455556533
No 84
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.16 E-value=5.3e-11 Score=120.38 Aligned_cols=107 Identities=17% Similarity=0.260 Sum_probs=83.5
Q ss_pred hhhccccccccc----chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCC
Q 014834 92 FIVRGGRDLFKL----LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG 167 (417)
Q Consensus 92 ~~vr~g~~~f~~----~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~ 167 (417)
.-+|+|+|.|.. ....+.| ++|||||+|+||.++|+.|+.. |++|+++++.. ..+.+.+.|+.
T Consensus 154 ~~~r~g~~~w~~~~~~~~~~l~g-ktvGIIGlG~IG~~vA~~l~~f------G~~V~~~d~~~--~~~~~~~~g~~---- 220 (365)
T 4hy3_A 154 IAFQEGTELWGGEGNASARLIAG-SEIGIVGFGDLGKALRRVLSGF------RARIRVFDPWL--PRSMLEENGVE---- 220 (365)
T ss_dssp HHHHHTCCCCSSSSTTSCCCSSS-SEEEEECCSHHHHHHHHHHTTS------CCEEEEECSSS--CHHHHHHTTCE----
T ss_pred HHHHcCCccccccccccccccCC-CEEEEecCCcccHHHHHhhhhC------CCEEEEECCCC--CHHHHhhcCee----
Confidence 346778854321 2478999 9999999999999999999988 99998777653 34556677876
Q ss_pred CcCCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 168 TLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 168 ~~~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
..+++|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 221 -~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~a 266 (365)
T 4hy3_A 221 -PASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLS 266 (365)
T ss_dssp -ECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECS
T ss_pred -eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECc
Confidence 35899999999999999997654 4555 46888999999999665
No 85
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.15 E-value=3.4e-11 Score=120.84 Aligned_cols=107 Identities=20% Similarity=0.188 Sum_probs=82.9
Q ss_pred hhccccccccc--------chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCcee
Q 014834 93 IVRGGRDLFKL--------LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE 164 (417)
Q Consensus 93 ~vr~g~~~f~~--------~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~ 164 (417)
-+|+|+|.... +...+.| ++|||||+|+||.++|+.|+.. |++|+++++...+ ..+.+.|+..
T Consensus 143 ~~~~g~w~~~~~~~~~~~~~~~~l~g-~tvGIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~ 213 (347)
T 1mx3_A 143 ALREGTRVQSVEQIREVASGAARIRG-ETLGIIGLGRVGQAVALRAKAF------GFNVLFYDPYLSD--GVERALGLQR 213 (347)
T ss_dssp HHHTTCCCCSHHHHHHHTTTCCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECTTSCT--THHHHHTCEE
T ss_pred HHHcCCcccccccccccccCccCCCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCcch--hhHhhcCCee
Confidence 45778884321 1257899 9999999999999999999988 9999887765433 2345567764
Q ss_pred cCCCcCCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 165 ENGTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 165 ~~~~~~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
+.+++|++++||+|++++|+... ..++ ++.++.||+|++|+.++
T Consensus 214 ----~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 259 (347)
T 1mx3_A 214 ----VSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTA 259 (347)
T ss_dssp ----CSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECS
T ss_pred ----cCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECC
Confidence 45899999999999999998654 4566 46788999999988555
No 86
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.15 E-value=3.9e-11 Score=118.16 Aligned_cols=104 Identities=11% Similarity=0.076 Sum_probs=81.4
Q ss_pred hhhcccccccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC
Q 014834 92 FIVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (417)
Q Consensus 92 ~~vr~g~~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s 171 (417)
.-+|+|+|........+.| ++|||||+|+||.++|+.|+.. |++|+++++... + .+... ..+
T Consensus 106 ~~~~~g~w~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~dr~~~---~----~~~~~----~~~ 167 (303)
T 1qp8_A 106 EKMKRGDYGRDVEIPLIQG-EKVAVLGLGEIGTRVGKILAAL------GAQVRGFSRTPK---E----GPWRF----TNS 167 (303)
T ss_dssp HHHHTTCCCCCSCCCCCTT-CEEEEESCSTHHHHHHHHHHHT------TCEEEEECSSCC---C----SSSCC----BSC
T ss_pred HHHHcCCCCCCCCCCCCCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcc---c----cCccc----CCC
Confidence 3467889964323357999 9999999999999999999988 999987776533 1 13332 457
Q ss_pred HHhhcCcCCEEEEccCCchH-HHHHH-HHHhcCCCCcEEEEecC
Q 014834 172 IYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSHG 213 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd~~~-~~Vl~-eI~~~lk~gaiLi~a~G 213 (417)
+++++++||+|++++|.... ..++. ++++.||+|++|+.++-
T Consensus 168 l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~sr 211 (303)
T 1qp8_A 168 LEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGR 211 (303)
T ss_dssp SHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred HHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCC
Confidence 89999999999999998754 55664 68899999999996664
No 87
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.15 E-value=6e-11 Score=119.11 Aligned_cols=107 Identities=18% Similarity=0.187 Sum_probs=82.4
Q ss_pred hhhcccccccc----cchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCC
Q 014834 92 FIVRGGRDLFK----LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG 167 (417)
Q Consensus 92 ~~vr~g~~~f~----~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~ 167 (417)
.-+|+|+|... .....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+ .+.+ .|+..
T Consensus 151 ~~~r~g~W~~~~~~~~~g~~l~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~-~~~~--~g~~~--- 217 (345)
T 4g2n_A 151 RMVRSGSWPGWGPTQLLGMGLTG-RRLGIFGMGRIGRAIATRARGF------GLAIHYHNRTRLS-HALE--EGAIY--- 217 (345)
T ss_dssp HHHHTTCCCCCCTTTTCBCCCTT-CEEEEESCSHHHHHHHHHHHTT------TCEEEEECSSCCC-HHHH--TTCEE---
T ss_pred HHHHcCCCcccCcccccccccCC-CEEEEEEeChhHHHHHHHHHHC------CCEEEEECCCCcc-hhhh--cCCeE---
Confidence 34688999631 12378999 9999999999999999999988 9999877765322 2222 26663
Q ss_pred CcCCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 168 TLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 168 ~~~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
+.+++|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 218 -~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~a 263 (345)
T 4g2n_A 218 -HDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINIS 263 (345)
T ss_dssp -CSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECS
T ss_pred -eCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECC
Confidence 45899999999999999996554 4455 46788899999999665
No 88
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.14 E-value=6.5e-11 Score=120.81 Aligned_cols=109 Identities=13% Similarity=0.043 Sum_probs=85.0
Q ss_pred hhhccccccccc---chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCC
Q 014834 92 FIVRGGRDLFKL---LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (417)
Q Consensus 92 ~~vr~g~~~f~~---~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~ 168 (417)
..+|+|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++... ..+.+.+.|+..
T Consensus 170 ~~~~~g~W~~~~~~~~~~~l~g-ktvGIIGlG~IG~~vA~~l~a~------G~~V~~~d~~~~-~~~~~~~~G~~~---- 237 (393)
T 2nac_A 170 EWARKGGWNIADCVSHAYDLEA-MHVGTVAAGRIGLAVLRRLAPF------DVHLHYTDRHRL-PESVEKELNLTW---- 237 (393)
T ss_dssp HHHHTTCCCHHHHHTTCCCCTT-CEEEEECCSHHHHHHHHHHGGG------TCEEEEECSSCC-CHHHHHHHTCEE----
T ss_pred HHHHcCCCCccccccCCccCCC-CEEEEEeECHHHHHHHHHHHhC------CCEEEEEcCCcc-chhhHhhcCcee----
Confidence 356789996421 1257999 9999999999999999999988 999987776532 345566678764
Q ss_pred cCCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 169 LGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 169 ~~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
..+++|++++||+|++++|.... ..++ ++.++.||+|++|+.++
T Consensus 238 ~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 283 (393)
T 2nac_A 238 HATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTA 283 (393)
T ss_dssp CSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECS
T ss_pred cCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECC
Confidence 45799999999999999997543 4566 46788999999988554
No 89
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.14 E-value=4.5e-11 Score=118.92 Aligned_cols=107 Identities=22% Similarity=0.256 Sum_probs=83.3
Q ss_pred hhhcccccc-----cc---cchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCce
Q 014834 92 FIVRGGRDL-----FK---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFT 163 (417)
Q Consensus 92 ~~vr~g~~~-----f~---~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~ 163 (417)
.-+|+|+|. +. .....+.| ++|||||+|.||.++|+.|+.. |++|+++++...+ +.+.+.|+.
T Consensus 124 ~~~~~~~w~~~~~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~ 194 (334)
T 2dbq_A 124 RFVRSGEWKKRGVAWHPKWFLGYDVYG-KTIGIIGLGRIGQAIAKRAKGF------NMRILYYSRTRKE--EVERELNAE 194 (334)
T ss_dssp HHHHTSHHHHTTCCCCTTTTCCCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHHCCE
T ss_pred HHHHcCCCcccccccccccccccCCCC-CEEEEEccCHHHHHHHHHHHhC------CCEEEEECCCcch--hhHhhcCcc
Confidence 346778885 21 11267899 9999999999999999999988 9999887776443 455566776
Q ss_pred ecCCCcCCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 164 EENGTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 164 ~~~~~~~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
..++++++++||+|++++|+... ..++ +++.+.|++|++|+.++
T Consensus 195 -----~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~s 240 (334)
T 2dbq_A 195 -----FKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIA 240 (334)
T ss_dssp -----ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred -----cCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 35889999999999999998774 4566 46788899999888554
No 90
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.13 E-value=6.2e-11 Score=119.56 Aligned_cols=109 Identities=15% Similarity=0.035 Sum_probs=85.1
Q ss_pred hhhcccccccc---cchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcE-EEEEecCChhhHHHHHHcCceecCC
Q 014834 92 FIVRGGRDLFK---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENG 167 (417)
Q Consensus 92 ~~vr~g~~~f~---~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~-ViVg~r~~s~s~~~A~~~G~~~~~~ 167 (417)
.-+|+|+|.+. .....+.| ++|||||+|+||.++|+.|+.. |++ |+++++... ..+.+.+.|+..
T Consensus 143 ~~~~~g~W~~~~~~~~~~~l~g-~tvgIIG~G~IG~~vA~~l~~~------G~~~V~~~d~~~~-~~~~~~~~g~~~--- 211 (364)
T 2j6i_A 143 EQIINHDWEVAAIAKDAYDIEG-KTIATIGAGRIGYRVLERLVPF------NPKELLYYDYQAL-PKDAEEKVGARR--- 211 (364)
T ss_dssp HHHHTTCCCHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHGGG------CCSEEEEECSSCC-CHHHHHHTTEEE---
T ss_pred HHHHhCCCCcCcccCCcccCCC-CEEEEECcCHHHHHHHHHHHhC------CCcEEEEECCCcc-chhHHHhcCcEe---
Confidence 35678899742 12368999 9999999999999999999988 996 887776532 345566778764
Q ss_pred CcCCHHhhcCcCCEEEEccCCchH-HHHHH-HHHhcCCCCcEEEEec
Q 014834 168 TLGDIYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH 212 (417)
Q Consensus 168 ~~~s~~Ea~~~ADIViLavpd~~~-~~Vl~-eI~~~lk~gaiLi~a~ 212 (417)
+.++++++++||+|++++|.... ..++. +.++.||+|++|+.++
T Consensus 212 -~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~a 257 (364)
T 2j6i_A 212 -VENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTA 257 (364)
T ss_dssp -CSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred -cCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECC
Confidence 45899999999999999998754 45563 5788999999888554
No 91
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.13 E-value=1.1e-09 Score=113.33 Aligned_cols=202 Identities=12% Similarity=0.114 Sum_probs=121.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH-------------------cC-ceecCCCcCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~-------------------~G-~~~~~~~~~s 171 (417)
+||+|||+|.||.++|.+|.+. |++|++++++.++ .+...+ .| +.. +.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~------G~~V~~~D~~~~~-v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~----t~d 71 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL------GANVRCIDTDRNK-IEQLNSGTIPIYEPGLEKMIARNVKAGRLRF----GTE 71 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHH-HHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE----ESC
T ss_pred CEEEEECcCHHHHHHHHHHHhc------CCEEEEEECCHHH-HHHHHcCCCcccCCCHHHHHHhhcccCcEEE----ECC
Confidence 6999999999999999999999 9999877765433 333222 11 222 467
Q ss_pred HHhhcCcCCEEEEccCCc----------hHHHHHHHHHhcCCCCcEEEEecCchhh---h----hhhcccCCC--CCccE
Q 014834 172 IYETISGSDLVLLLISDA----------AQADNYEKIFSCMKPNSILGLSHGFLLG---H----LQSIGLDFP--KNIGV 232 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd~----------~~~~Vl~eI~~~lk~gaiLi~a~G~~i~---~----~~~~~i~~~--~dv~V 232 (417)
+++++++||+||+++|.. ...+++++|.+++++|++|++.+.+... . +.+...... .++ .
T Consensus 72 ~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~-~ 150 (450)
T 3gg2_A 72 IEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDF-D 150 (450)
T ss_dssp HHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCE-E
T ss_pred HHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcce-e
Confidence 889999999999999977 6778999999999999999888765322 1 111000111 222 3
Q ss_pred EEeccCCC--chhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC--ceeccchhhhhhhhccccchh
Q 014834 233 IAVCPKGM--GPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP--FTFATTLEQEYKSDIFGERGI 308 (417)
Q Consensus 233 I~v~Pntp--g~~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~--~~iettf~~e~~~dl~ge~t~ 308 (417)
+...|... +..+++... .+.++ +.. .+.++.+.+..++..++.. .++.+.. ...+.-.+.+.+
T Consensus 151 v~~~Pe~a~eG~~~~~~~~---------p~~iv-vG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~-~~aE~~Kl~~N~- 217 (450)
T 3gg2_A 151 IASNPEFLKEGNAIDDFMK---------PDRVV-VGV-DSDRARELITSLYKPMLLNNFRVLFMDI-ASAEMTKYAANA- 217 (450)
T ss_dssp EEECCCCCCTTSHHHHHHS---------CSCEE-EEE-SSHHHHHHHHHHHTTTCCSCCCEEEECH-HHHHHHHHHHHH-
T ss_pred EEechhhhcccchhhhccC---------CCEEE-EEc-CCHHHHHHHHHHHHHHhcCCCeEEecCH-HHHHHHHHHHHH-
Confidence 44556432 222211111 11212 122 1468889999999998862 1222221 111111122221
Q ss_pred hhchHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 014834 309 LLGAVHGIVESLFRRFTENGMSEDLAYKNT 338 (417)
Q Consensus 309 L~G~~pA~iea~~d~~v~~Gl~~e~A~~~~ 338 (417)
+....-+++.-+...+.+.|+++++.+..+
T Consensus 218 ~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~ 247 (450)
T 3gg2_A 218 MLATRISFMNDVANLCERVGADVSMVRLGI 247 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 112222345556667788899888776643
No 92
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.12 E-value=4.6e-11 Score=119.27 Aligned_cols=107 Identities=23% Similarity=0.323 Sum_probs=82.2
Q ss_pred hhhhccccccccc--chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCC
Q 014834 91 EFIVRGGRDLFKL--LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (417)
Q Consensus 91 e~~vr~g~~~f~~--~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~ 168 (417)
+.-+|.|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+. .|+..
T Consensus 143 ~~~~~~g~w~~~~~~~~~~l~g-~~vgIIG~G~iG~~vA~~l~~~------G~~V~~~dr~~~~~------~g~~~---- 205 (333)
T 3ba1_A 143 DKYVRRGAWKFGDFKLTTKFSG-KRVGIIGLGRIGLAVAERAEAF------DCPISYFSRSKKPN------TNYTY---- 205 (333)
T ss_dssp HHHHHTTGGGGCCCCCCCCCTT-CCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCCTT------CCSEE----
T ss_pred HHHHHcCCCCccccccccccCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCCchhc------cCcee----
Confidence 3456889996421 1268999 9999999999999999999988 99998877754321 25553
Q ss_pred cCCHHhhcCcCCEEEEccCCch-HHHHH-HHHHhcCCCCcEEEEec-Cc
Q 014834 169 LGDIYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLSH-GF 214 (417)
Q Consensus 169 ~~s~~Ea~~~ADIViLavpd~~-~~~Vl-~eI~~~lk~gaiLi~a~-G~ 214 (417)
..++++++++||+|++++|+.. ...++ +++.+.|++|++|+.++ |.
T Consensus 206 ~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~ 254 (333)
T 3ba1_A 206 YGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGP 254 (333)
T ss_dssp ESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGG
T ss_pred cCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCc
Confidence 4689999999999999999865 45666 45777899999888554 43
No 93
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.12 E-value=5.6e-11 Score=117.39 Aligned_cols=154 Identities=20% Similarity=0.166 Sum_probs=102.0
Q ss_pred hhhcccccc-cc---cchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCC
Q 014834 92 FIVRGGRDL-FK---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG 167 (417)
Q Consensus 92 ~~vr~g~~~-f~---~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~ 167 (417)
.-+|+|+|. +. .....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+.. +.
T Consensus 122 ~~~~~g~w~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~~-------~~---- 183 (311)
T 2cuk_A 122 AYARDGLWKAWHPELLLGLDLQG-LTLGLVGMGRIGQAVAKRALAF------GMRVVYHARTPKPLP-------YP---- 183 (311)
T ss_dssp HHHHTTCCCCCCTTTTCBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSSS-------SC----
T ss_pred HHHHcCCCCccccccccCcCCCC-CEEEEEEECHHHHHHHHHHHHC------CCEEEEECCCCcccc-------cc----
Confidence 346788895 21 12368999 9999999999999999999988 999987776543321 22
Q ss_pred CcCCHHhhcCcCCEEEEccCCchH-HHHHH-HHHhcCCCCcEEEEecCchhh---hhhhcccC--C-CCCccEEEeccCC
Q 014834 168 TLGDIYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSHGFLLG---HLQSIGLD--F-PKNIGVIAVCPKG 239 (417)
Q Consensus 168 ~~~s~~Ea~~~ADIViLavpd~~~-~~Vl~-eI~~~lk~gaiLi~a~G~~i~---~~~~~~i~--~-~~dv~VI~v~Pnt 239 (417)
..++++++++||+|++++|+... ..++. +..+.||+|++|+.++--.+. .+.+ .+. + ...+||+..+|..
T Consensus 184 -~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~-aL~g~i~ga~lDv~~~eP~~ 261 (311)
T 2cuk_A 184 -FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVE-ALRGHLFGAGLDVTDPEPLP 261 (311)
T ss_dssp -BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHH-HHTTTSSEEEESSCSSSSCC
T ss_pred -cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHH-HHhCcCCEEEEeeCCCCCCC
Confidence 45789999999999999998753 55664 577889999998866543221 1111 111 1 1234566666733
Q ss_pred CchhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHH
Q 014834 240 MGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV 276 (417)
Q Consensus 240 pg~~vr~ly~~G~~~~G~Gv~~liav~~d-vsgea~e~ 276 (417)
+.. .+|. .-+.+++||.. .|.++.+.
T Consensus 262 ~~~---~L~~--------~~nviltPh~~~~t~~~~~~ 288 (311)
T 2cuk_A 262 PGH---PLYA--------LPNAVITPHIGSAGRTTRER 288 (311)
T ss_dssp TTS---GGGG--------CTTEEECCSCTTCBHHHHHH
T ss_pred CCC---hhhh--------CCCEEECCcCCCCCHHHHHH
Confidence 222 2343 35788999874 34444333
No 94
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.11 E-value=1.1e-10 Score=115.91 Aligned_cols=108 Identities=20% Similarity=0.165 Sum_probs=83.3
Q ss_pred hhhccccccc-c---cchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCC
Q 014834 92 FIVRGGRDLF-K---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG 167 (417)
Q Consensus 92 ~~vr~g~~~f-~---~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~ 167 (417)
.-+|+|+|.. . .....+.| ++|||||+|.||.++|+.|+.. |++|++++++..+ .+.+.+.|+..
T Consensus 133 ~~~~~~~w~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~~-~~~~~~~g~~~--- 201 (330)
T 2gcg_A 133 EEVKNGGWTSWKPLWLCGYGLTQ-STVGIIGLGRIGQAIARRLKPF------GVQRFLYTGRQPR-PEEAAEFQAEF--- 201 (330)
T ss_dssp HHHHTTCCCSCCTTSSCBCCCTT-CEEEEECCSHHHHHHHHHHGGG------TCCEEEEESSSCC-HHHHHTTTCEE---
T ss_pred HHHHcCCCcccCcccccCcCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCcc-hhHHHhcCcee---
Confidence 3467788853 1 11267999 9999999999999999999988 9999887765432 34455667764
Q ss_pred CcCCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 168 TLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 168 ~~~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
. +.++++++||+|++++|+... ..++ +++.+.|++|++|+.++
T Consensus 202 -~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~s 246 (330)
T 2gcg_A 202 -V-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINIS 246 (330)
T ss_dssp -C-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECS
T ss_pred -C-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 3 889999999999999998754 4555 46778899999888554
No 95
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.09 E-value=7.2e-11 Score=117.59 Aligned_cols=106 Identities=18% Similarity=0.156 Sum_probs=81.8
Q ss_pred hhhccccccc-c--cch----hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCcee
Q 014834 92 FIVRGGRDLF-K--LLP----DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE 164 (417)
Q Consensus 92 ~~vr~g~~~f-~--~~~----~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~ 164 (417)
.-+|+|+|.. . ... ..+.| ++|||||+|+||.++|+.|+.. |++|+++++...+ +.+.+.|+..
T Consensus 121 ~~~~~g~w~~~~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~ 191 (333)
T 2d0i_A 121 KFIRRGEWESHAKIWTGFKRIESLYG-KKVGILGMGAIGKAIARRLIPF------GVKLYYWSRHRKV--NVEKELKARY 191 (333)
T ss_dssp HHHHTTCCCCHHHHHTTSCCCCCSTT-CEEEEECCSHHHHHHHHHHGGG------TCEEEEECSSCCH--HHHHHHTEEE
T ss_pred HHHHcCCCCcCcccccCCcccCCCCc-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcch--hhhhhcCcee
Confidence 3467788852 1 112 57999 9999999999999999999988 9999877776443 4555667763
Q ss_pred cCCCcCCHHhhcCcCCEEEEccCCc-hHHHHHH-HHHhcCCCCcEEEEec
Q 014834 165 ENGTLGDIYETISGSDLVLLLISDA-AQADNYE-KIFSCMKPNSILGLSH 212 (417)
Q Consensus 165 ~~~~~~s~~Ea~~~ADIViLavpd~-~~~~Vl~-eI~~~lk~gaiLi~a~ 212 (417)
.+.++++++||+|++++|.. ....++. ++.+.|++| +|+.++
T Consensus 192 -----~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~s 235 (333)
T 2d0i_A 192 -----MDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIG 235 (333)
T ss_dssp -----CCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECS
T ss_pred -----cCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECC
Confidence 48889999999999999988 4455664 567889999 887554
No 96
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.09 E-value=1.4e-10 Score=116.23 Aligned_cols=109 Identities=18% Similarity=0.129 Sum_probs=83.7
Q ss_pred hhhcccc---ccc------ccchhhccCCCEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEEEEecCChhhHHHHHHcC
Q 014834 92 FIVRGGR---DLF------KLLPDAFNGINQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGSRSFAEARAAG 161 (417)
Q Consensus 92 ~~vr~g~---~~f------~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr-~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G 161 (417)
.-+|+|+ |.. ..+ ..+.| ++|||||+|+||.++|+.|+ .. |++|+++++... ..+.+.+.|
T Consensus 137 ~~~~~g~~~~w~~~~~~~~~~~-~~l~g-~~vgIIG~G~IG~~vA~~l~~~~------G~~V~~~d~~~~-~~~~~~~~g 207 (348)
T 2w2k_A 137 RAARTGDPETFNRVHLEIGKSA-HNPRG-HVLGAVGLGAIQKEIARKAVHGL------GMKLVYYDVAPA-DAETEKALG 207 (348)
T ss_dssp HHHTTCCHHHHHHHHHHHHTTC-CCSTT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEECSSCC-CHHHHHHHT
T ss_pred HHHHcCCCcccccccccccccC-cCCCC-CEEEEEEECHHHHHHHHHHHHhc------CCEEEEECCCCc-chhhHhhcC
Confidence 4467788 831 223 68999 99999999999999999999 88 999887776543 334455567
Q ss_pred ceecCCCcCCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEecC
Q 014834 162 FTEENGTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 162 ~~~~~~~~~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~G 213 (417)
+.. +.++++++++||+|++++|+... ..++ .++.+.|++|++|+..+.
T Consensus 208 ~~~----~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~sr 257 (348)
T 2w2k_A 208 AER----VDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTAR 257 (348)
T ss_dssp CEE----CSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred cEE----eCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence 764 44789999999999999998764 4555 367788999999886554
No 97
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.08 E-value=1.3e-09 Score=106.73 Aligned_cols=153 Identities=20% Similarity=0.174 Sum_probs=100.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecC---C--------CcCCHHhhcCcCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---G--------TLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~---~--------~~~s~~Ea~~~AD 180 (417)
+||+|||+|+||.++|..|.++ |.+|.++.|.. .+..++.|+...+ + .+.+.+++.+.+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~---~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT------GHCVSVVSRSD---YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT------TCEEEEECSTT---HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCh---HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCC
Confidence 7999999999999999999999 99998888753 2444555653211 1 1245667766899
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEE-EEecCch-hhhhhhcccCCCCCccEEEecc------CCCchhHHHHHhhcc
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFL-LGHLQSIGLDFPKNIGVIAVCP------KGMGPSVRRLYVQGK 252 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiL-i~a~G~~-i~~~~~~~i~~~~dv~VI~v~P------ntpg~~vr~ly~~G~ 252 (417)
+||++||.....+++++|.++++++++| ++..|+. ...+.+ .+|.+ .|+.... ..|+.+. .+
T Consensus 74 lVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~---~~~~~-~vl~g~~~~~a~~~~pg~v~-----~~- 143 (320)
T 3i83_A 74 CTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAA---AFPDN-EVISGLAFIGVTRTAPGEIW-----HQ- 143 (320)
T ss_dssp EEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHH---HSTTS-CEEEEEEEEEEEEEETTEEE-----EE-
T ss_pred EEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHH---HCCCC-cEEEEEEEeceEEcCCCEEE-----EC-
Confidence 9999999999999999999999998864 5788986 344443 34443 3443221 2233331 11
Q ss_pred cccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 253 EINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 253 ~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~ 287 (417)
|.|... ++.....+.+..+...+++...|..
T Consensus 144 ---~~~~~~-ig~~~~~~~~~~~~l~~~l~~~~~~ 174 (320)
T 3i83_A 144 ---AYGRLM-LGNYPGGVSERVKTLAAAFEEAGID 174 (320)
T ss_dssp ---EEEEEE-EEESSSCCCHHHHHHHHHHHHTTSC
T ss_pred ---CCCEEE-EecCCCCccHHHHHHHHHHHhCCCC
Confidence 223322 3332222335566677788887765
No 98
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.08 E-value=3e-11 Score=119.75 Aligned_cols=105 Identities=10% Similarity=0.066 Sum_probs=81.3
Q ss_pred hhcccccccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCH
Q 014834 93 IVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (417)
Q Consensus 93 ~vr~g~~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~ 172 (417)
-+|+|+|..... ..+.| ++|||||+|+||.++|+.|+.. |++|+++++..... .++... ....++
T Consensus 123 ~~~~g~W~~~~~-~~l~g-~tvGIiG~G~IG~~vA~~l~~~------G~~V~~~dr~~~~~------~~~~~~-~~~~~l 187 (315)
T 3pp8_A 123 LKNQALWKPLPE-YTREE-FSVGIMGAGVLGAKVAESLQAW------GFPLRCWSRSRKSW------PGVESY-VGREEL 187 (315)
T ss_dssp HHHTTCCCCCCC-CCSTT-CCEEEECCSHHHHHHHHHHHTT------TCCEEEEESSCCCC------TTCEEE-ESHHHH
T ss_pred HHHhcccCCCCC-CCcCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEEcCCchhh------hhhhhh-cccCCH
Confidence 457889976644 78999 9999999999999999999988 99998887764321 233210 012478
Q ss_pred HhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 173 YETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 173 ~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
+|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 188 ~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 229 (315)
T 3pp8_A 188 RAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLA 229 (315)
T ss_dssp HHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECS
T ss_pred HHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECC
Confidence 8999999999999996654 4566 46889999999998665
No 99
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.07 E-value=4.3e-11 Score=119.11 Aligned_cols=106 Identities=10% Similarity=0.113 Sum_probs=81.2
Q ss_pred hhcccccccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCH
Q 014834 93 IVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (417)
Q Consensus 93 ~vr~g~~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~ 172 (417)
-+|+|+|........+.| ++|||||+|+||.++|+.|+.. |++|+++++...+. +.+ ..... ..++
T Consensus 120 ~~~~~~W~~~~~~~~l~g-ktvGIiGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~~~-~~~~~-----~~~l 185 (324)
T 3evt_A 120 QRGARQWALPMTTSTLTG-QQLLIYGTGQIGQSLAAKASAL------GMHVIGVNTTGHPA-DHF-HETVA-----FTAT 185 (324)
T ss_dssp HTTTCCSSCSSCCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCCCC-TTC-SEEEE-----GGGC
T ss_pred HHhcCCcccCCCCccccC-CeEEEECcCHHHHHHHHHHHhC------CCEEEEECCCcchh-HhH-hhccc-----cCCH
Confidence 467889976643488999 9999999999999999999988 99998887764321 111 11111 3578
Q ss_pred HhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 173 YETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 173 ~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
+|++++||+|++++|.... ..++ .+.+..||+|++|+.++
T Consensus 186 ~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~a 227 (324)
T 3evt_A 186 ADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIG 227 (324)
T ss_dssp HHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECS
T ss_pred HHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcC
Confidence 8999999999999997654 4455 46788999999999665
No 100
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.07 E-value=2.9e-11 Score=120.43 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=80.6
Q ss_pred hhcccccccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCH
Q 014834 93 IVRGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (417)
Q Consensus 93 ~vr~g~~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~ 172 (417)
-+|+|+|..... ..+.| ++|||||+|+||.++|+.|+.. |++|+++++..... ... .+... ..++
T Consensus 124 ~~~~g~W~~~~~-~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~~~--~~~~~----~~~l 188 (324)
T 3hg7_A 124 QQKQRLWQSHPY-QGLKG-RTLLILGTGSIGQHIAHTGKHF------GMKVLGVSRSGRER-AGF--DQVYQ----LPAL 188 (324)
T ss_dssp HHHTTCCCCCCC-CCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCC-TTC--SEEEC----GGGH
T ss_pred HHhhCCCcCCCC-ccccc-ceEEEEEECHHHHHHHHHHHhC------CCEEEEEcCChHHh-hhh--hcccc----cCCH
Confidence 467889986555 78999 9999999999999999999998 99998777654221 110 11111 4579
Q ss_pred HhhcCcCCEEEEccCCchH-HHHHH-HHHhcCCCCcEEEEec
Q 014834 173 YETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH 212 (417)
Q Consensus 173 ~Ea~~~ADIViLavpd~~~-~~Vl~-eI~~~lk~gaiLi~a~ 212 (417)
+|++++||+|++++|.... ..++. +.+..||+|++|+.++
T Consensus 189 ~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~a 230 (324)
T 3hg7_A 189 NKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVG 230 (324)
T ss_dssp HHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECS
T ss_pred HHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECC
Confidence 9999999999999996654 34554 5778899999999665
No 101
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.06 E-value=1.8e-09 Score=106.02 Aligned_cols=101 Identities=18% Similarity=0.245 Sum_probs=77.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecC---------CCcCCHHhhcCcCCEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---------GTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~---------~~~~s~~Ea~~~ADIV 182 (417)
+||+|||+|+||.++|..|.++ |++|.++ ++ +...+...+.|..... ....+.+ .++.+|+|
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~------G~~V~l~-~~-~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~v 90 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARA------GHEVILI-AR-PQHVQAIEATGLRLETQSFDEQVKVSASSDPS-AVQGADLV 90 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT------TCEEEEE-CC-HHHHHHHHHHCEEEECSSCEEEECCEEESCGG-GGTTCSEE
T ss_pred CcEEEECcCHHHHHHHHHHHHC------CCeEEEE-Ec-HhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH-HcCCCCEE
Confidence 8999999999999999999999 9999877 54 3445555556654210 0023444 46899999
Q ss_pred EEccCCchHHHHHHHHHhcCCCCcEEE-EecCchh-hhhhh
Q 014834 183 LLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQS 221 (417)
Q Consensus 183 iLavpd~~~~~Vl~eI~~~lk~gaiLi-~a~G~~i-~~~~~ 221 (417)
|++||+....+++++|.++++++++|+ ...|+.. ..+.+
T Consensus 91 ilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~ 131 (318)
T 3hwr_A 91 LFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENADTLRS 131 (318)
T ss_dssp EECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHH
T ss_pred EEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHH
Confidence 999999999999999999999998654 8889976 34433
No 102
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.05 E-value=1.6e-10 Score=115.97 Aligned_cols=104 Identities=18% Similarity=0.110 Sum_probs=79.2
Q ss_pred hhc-cccccc--ccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCc
Q 014834 93 IVR-GGRDLF--KLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (417)
Q Consensus 93 ~vr-~g~~~f--~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~ 169 (417)
-+| +|+|.+ ......+.| ++|||||+|+||.++|+.|+.. |++|+++++...+ ..+.++. .
T Consensus 128 ~~~~~g~~~w~~~~~~~~l~g-ktvgIiGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~----~~~~~~~-----~ 191 (343)
T 2yq5_A 128 RMDHDHDFTWPSNLISNEIYN-LTVGLIGVGHIGSAVAEIFSAM------GAKVIAYDVAYNP----EFEPFLT-----Y 191 (343)
T ss_dssp HHHHHCCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCG----GGTTTCE-----E
T ss_pred HHHHcCCcccccCCCccccCC-CeEEEEecCHHHHHHHHHHhhC------CCEEEEECCChhh----hhhcccc-----c
Confidence 345 676554 223478999 9999999999999999999988 9999877776433 1223443 3
Q ss_pred CCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 170 GDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 170 ~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
.+++|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 192 ~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 236 (343)
T 2yq5_A 192 TDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCA 236 (343)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred cCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECC
Confidence 5899999999999999997544 3455 36788899999999665
No 103
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.04 E-value=3.2e-10 Score=112.91 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=80.0
Q ss_pred hhhccccccccc-chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcC
Q 014834 92 FIVRGGRDLFKL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (417)
Q Consensus 92 ~~vr~g~~~f~~-~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~ 170 (417)
.-+|+|+|.+.. ....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+. +.+ ++.. ..
T Consensus 127 ~~~~~g~w~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~~~-~~~~----~~ 191 (333)
T 1j4a_A 127 EKVARHDLRWAPTIGREVRD-QVVGVVGTGHIGQVFMQIMEGF------GAKVITYDIFRNPE---LEK-KGYY----VD 191 (333)
T ss_dssp HHHHTTBCCCTTCCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCHH---HHH-TTCB----CS
T ss_pred HHHHcCCCccCCcccccCCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcchh---HHh-hCee----cC
Confidence 345778885432 2368999 9999999999999999999988 99998877764432 222 3332 33
Q ss_pred CHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 171 s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
+++|++++||+|++++|.... ..++ ++..+.||+|++|+.++
T Consensus 192 ~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~a 235 (333)
T 1j4a_A 192 SLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVS 235 (333)
T ss_dssp CHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECS
T ss_pred CHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECC
Confidence 789999999999999997654 4555 35778899999888554
No 104
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.04 E-value=1.1e-09 Score=108.04 Aligned_cols=94 Identities=17% Similarity=0.231 Sum_probs=74.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecC---------CCcCCHHhhcCcCCEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---------GTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~---------~~~~s~~Ea~~~ADIV 182 (417)
+||+|||+|+||.++|..|.++ |++|.+.+|. +..+..++.|+.... ....+.++ +..+|+|
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~------g~~V~~~~r~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~V 74 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA------GEAINVLARG--ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVV 74 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT------TCCEEEECCH--HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCEEEEEECh--HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEE
Confidence 7999999999999999999999 9999888774 345566667765310 01235655 5899999
Q ss_pred EEccCCchHHHHHHHHHhcCCCCcEEE-EecCc
Q 014834 183 LLLISDAAQADNYEKIFSCMKPNSILG-LSHGF 214 (417)
Q Consensus 183 iLavpd~~~~~Vl~eI~~~lk~gaiLi-~a~G~ 214 (417)
|++||+....+++++|.++++++++|+ +..|+
T Consensus 75 ilavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 75 IVAVKAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp EECCCHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred EEeCCchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 999999988999999999999998655 67785
No 105
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.03 E-value=2.9e-09 Score=110.81 Aligned_cols=208 Identities=12% Similarity=0.054 Sum_probs=116.1
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc-------------------CceecCCCcCC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------------GFTEENGTLGD 171 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~-------------------G~~~~~~~~~s 171 (417)
|+||+|||+|.||.++|.+|.+. |.|++|++++++.+ ..+...+. ++.. +.+
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~----g~g~~V~~~D~~~~-~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~----t~~ 79 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHK----CPHITVTVVDMNTA-KIAEWNSDKLPIYEPGLDEIVFAARGRNLFF----SSD 79 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSCHH-HHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE----ESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECCHH-HHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE----ECC
Confidence 47999999999999999999887 22478877766533 23332221 1221 346
Q ss_pred HHhhcCcCCEEEEccCCch---------------HHHHHHHHHhcCCCCcEEEEecCchhh---hhhhcccC-CC--CCc
Q 014834 172 IYETISGSDLVLLLISDAA---------------QADNYEKIFSCMKPNSILGLSHGFLLG---HLQSIGLD-FP--KNI 230 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd~~---------------~~~Vl~eI~~~lk~gaiLi~a~G~~i~---~~~~~~i~-~~--~dv 230 (417)
+.+++++||+||+++|... ..+++++|.+++++|++|++.+.+... .+...... .+ ..+
T Consensus 80 ~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~ 159 (481)
T 2o3j_A 80 IPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENL 159 (481)
T ss_dssp HHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----C
T ss_pred HHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCC
Confidence 7788899999999987532 567888899999999998887655322 11110000 11 123
Q ss_pred c-EEEeccCC--CchhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHHHHHHHHHhCC-Cceeccchhhhhhhhcccc
Q 014834 231 G-VIAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVALGWSVALGS-PFTFATTLEQEYKSDIFGE 305 (417)
Q Consensus 231 ~-VI~v~Pnt--pg~~vr~ly~~G~~~~G~Gv~~liav~~d-vsgea~e~a~~L~~alG~-~~~iettf~~e~~~dl~ge 305 (417)
+ .+..+|.. |+..+..++... ..++....+ .+.++.+.+..++..+|. ...+.+.... .+.-.+-+
T Consensus 160 d~~v~~~Pe~~~~G~a~~~~~~~~--------~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~-ae~~Kl~~ 230 (481)
T 2o3j_A 160 KFQVLSNPEFLAEGTAMKDLANPD--------RVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWS-SELSKLVA 230 (481)
T ss_dssp CEEEEECCCCCCTTCHHHHHHSCS--------CEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHH-HHHHHHHH
T ss_pred ceEEEeCcccccccchhhcccCCC--------EEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHH-HHHHHHHH
Confidence 3 25677753 343333222211 122332221 112577888899999985 3222222111 11111212
Q ss_pred chhhhchHHHHHHHHHHHHHHcCCCHHHHHHH
Q 014834 306 RGILLGAVHGIVESLFRRFTENGMSEDLAYKN 337 (417)
Q Consensus 306 ~t~L~G~~pA~iea~~d~~v~~Gl~~e~A~~~ 337 (417)
.+. ....-+++.-+...+.+.|++.++....
T Consensus 231 N~~-~a~~ia~~nE~~~la~~~Gid~~~v~~~ 261 (481)
T 2o3j_A 231 NAF-LAQRISSINSISAVCEATGAEISEVAHA 261 (481)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHSCCHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 211 1122235555666777788888766654
No 106
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.02 E-value=2.6e-09 Score=110.60 Aligned_cols=200 Identities=13% Similarity=0.093 Sum_probs=119.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH-------------------cC-ceecCCCcCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~-------------------~G-~~~~~~~~~s 171 (417)
-+|+|||+|.||.++|.+|.+. |++|++++++.++. +...+ .| +.. +.+
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~------G~~V~~~D~~~~kv-~~l~~g~~~~~epgl~~~~~~~~~~g~l~~----ttd 77 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF------GHEVVCVDKDARKI-ELLHQNVMPIYEPGLDALVASNVKAGRLSF----TTD 77 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCSTTH-HHHTTTCCSSCCTTHHHHHHHHHHTTCEEE----ESC
T ss_pred eEEEEEcCCHHHHHHHHHHHHC------CCEEEEEeCCHHHH-HHHhcCCCCccCCCHHHHHHhhcccCCEEE----ECC
Confidence 5899999999999999999999 99998887765543 22222 12 222 468
Q ss_pred HHhhcCcCCEEEEccCCc-----------hHHHHHHHHHhcCCCCcEEEEecCchhhh-------hhhcccCCCCCccEE
Q 014834 172 IYETISGSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGFLLGH-------LQSIGLDFPKNIGVI 233 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd~-----------~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~-------~~~~~i~~~~dv~VI 233 (417)
+++++++||+||+|+|.. ...+++++|.+++++|++|++.+++.... +.+. ....++ .+
T Consensus 78 ~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~--~~~~d~-~v 154 (446)
T 4a7p_A 78 LAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV--APNSGA-KV 154 (446)
T ss_dssp HHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH--STTSCC-EE
T ss_pred HHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh--CCCCCc-eE
Confidence 889999999999997744 36678889999999999999888764321 1111 111233 34
Q ss_pred EeccCCCch--hHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC---ceeccchhhhhhhhccccchh
Q 014834 234 AVCPKGMGP--SVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP---FTFATTLEQEYKSDIFGERGI 308 (417)
Q Consensus 234 ~v~Pntpg~--~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~---~~iettf~~e~~~dl~ge~t~ 308 (417)
...|..... .+++... .+. +.+.. .+.++.+.+..++..++.. ..+-+.. ...+.-.+.+.+.
T Consensus 155 ~~~Pe~a~eG~a~~d~~~---------p~~-ivvG~-~~~~~~~~~~~ly~~~~~~~~~~~~~~d~-~~aE~~Kl~~N~~ 222 (446)
T 4a7p_A 155 VSNPEFLREGAAIEDFKR---------PDR-VVVGT-EDEFARQVMREIYRPLSLNQSAPVLFTGR-RTSELIKYAANAF 222 (446)
T ss_dssp EECCCCCCTTSHHHHHHS---------CSC-EEEEC-SCHHHHHHHHHHHCSCC-----CEEEECH-HHHHHHHHHHHHH
T ss_pred EeCcccccccchhhhccC---------CCE-EEEeC-CcHHHHHHHHHHHHHHhcCCCeEEEeCCH-HHHHHHHHHHHHH
Confidence 556643222 1111110 112 22222 1457888889999888753 1111111 1111111222221
Q ss_pred hhchHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 014834 309 LLGAVHGIVESLFRRFTENGMSEDLAYKNT 338 (417)
Q Consensus 309 L~G~~pA~iea~~d~~v~~Gl~~e~A~~~~ 338 (417)
...--+++.-+...+.+.|+++++.+..+
T Consensus 223 -~a~~ia~~nE~~~l~~~~GiD~~~v~~~~ 251 (446)
T 4a7p_A 223 -LAVKITFINEIADLCEQVGADVQEVSRGI 251 (446)
T ss_dssp -HHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 12223355556777788899988776643
No 107
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.02 E-value=2.4e-10 Score=116.89 Aligned_cols=105 Identities=19% Similarity=0.174 Sum_probs=79.7
Q ss_pred hhhccccccccc-chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcC
Q 014834 92 FIVRGGRDLFKL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (417)
Q Consensus 92 ~~vr~g~~~f~~-~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~ 170 (417)
.-+|+|+|.... ...++.| |+|||||+|+||..+|+.++.. |++|+++++..... ..++.. ..
T Consensus 126 ~~~~~g~W~~~~~~~~el~g-ktlGiIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~~-----~~~~~~----~~ 189 (404)
T 1sc6_A 126 AKAHRGVGNKLAAGSFEARG-KKLGIIGYGHIGTQLGILAESL------GMYVYFYDIENKLP-----LGNATQ----VQ 189 (404)
T ss_dssp HHHHHTCCC-----CCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCC-----CTTCEE----CS
T ss_pred HHHHcCCccccCCCccccCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEEcCCchhc-----cCCcee----cC
Confidence 346788996432 2368999 9999999999999999999988 99998777653221 112432 45
Q ss_pred CHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 171 s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
+++|++++||+|++++|.... ..++ ++.++.||+|++|+.++
T Consensus 190 ~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~a 233 (404)
T 1sc6_A 190 HLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINAS 233 (404)
T ss_dssp CHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred CHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECC
Confidence 899999999999999998754 4566 45778899999998665
No 108
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.02 E-value=3e-09 Score=110.00 Aligned_cols=208 Identities=14% Similarity=0.087 Sum_probs=115.1
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHH---------------H----cCceecCCCcCC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR---------------A----AGFTEENGTLGD 171 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~---------------~----~G~~~~~~~~~s 171 (417)
|+||+|||+|.||.++|.+|.+. |.|++|++++++.++ .+... + .++.. +.+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~----g~G~~V~~~d~~~~~-~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~----t~~ 75 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHM----CPEIRVTVVDVNESR-INAWNSPTLPIYEPGLKEVVESCRGKNLFF----STN 75 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSCHHH-HHHHTSSSCSSCCTTHHHHHHHHBTTTEEE----ESC
T ss_pred ccEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECCHHH-HHHHhCCCCCcCCCCHHHHHHHhhcCCEEE----ECC
Confidence 57999999999999999999876 224788877665332 22211 1 23432 457
Q ss_pred HHhhcCcCCEEEEccCCch---------------HHHHHHHHHhcCCCCcEEEEecCchhhh---hhhcc-cCCCCCcc-
Q 014834 172 IYETISGSDLVLLLISDAA---------------QADNYEKIFSCMKPNSILGLSHGFLLGH---LQSIG-LDFPKNIG- 231 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd~~---------------~~~Vl~eI~~~lk~gaiLi~a~G~~i~~---~~~~~-i~~~~dv~- 231 (417)
+++++++||+||+++|... ..+++++|.+++++|++|++.+.+.+.. +.... ......++
T Consensus 76 ~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~ 155 (467)
T 2q3e_A 76 IDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNL 155 (467)
T ss_dssp HHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEE
T ss_pred HHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCe
Confidence 8889999999999998543 3467778999999999888765543211 11100 01111233
Q ss_pred EEEeccCC--CchhHHHHHhhcccccCCCceEEEee-cCCCCHHHHHHHHHHHHHh-CCCceeccchhhhhhhhccccch
Q 014834 232 VIAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAV-HQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYKSDIFGERG 307 (417)
Q Consensus 232 VI~v~Pnt--pg~~vr~ly~~G~~~~G~Gv~~liav-~~dvsgea~e~a~~L~~al-G~~~~iettf~~e~~~dl~ge~t 307 (417)
.|...|.. ++..+.+++... ..++.. ....+.+..+.+..++..+ |...++.+.... -+..-+.+.+
T Consensus 156 ~V~~~Pe~~~~G~~~~d~~~~~--------rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~-ae~~Kl~~N~ 226 (467)
T 2q3e_A 156 QVLSNPEFLAEGTAIKDLKNPD--------RVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWS-SELSKLAANA 226 (467)
T ss_dssp EEEECCCCCCTTSHHHHHHSCS--------CEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHH-HHHHHHHHHH
T ss_pred EEEeCHHHhhcccchhhccCCC--------EEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHH-HHHHHHHHHH
Confidence 23455543 333333332211 122331 1113567889999999998 543222221110 0111121111
Q ss_pred hhhchHHHHHHHHHHHHHHcCCCHHHHHHH
Q 014834 308 ILLGAVHGIVESLFRRFTENGMSEDLAYKN 337 (417)
Q Consensus 308 ~L~G~~pA~iea~~d~~v~~Gl~~e~A~~~ 337 (417)
. ....-+++.-++..+.+.|+++++....
T Consensus 227 ~-~a~~ia~~nE~~~l~~~~Gid~~~v~~~ 255 (467)
T 2q3e_A 227 F-LAQRISSINSISALCEATGADVEEVATA 255 (467)
T ss_dssp H-HHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 1 1122234555666667778887766553
No 109
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.00 E-value=1.7e-09 Score=105.86 Aligned_cols=96 Identities=21% Similarity=0.221 Sum_probs=75.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc-CceecC----------CCcCCHHhhcCcCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEEN----------GTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~-G~~~~~----------~~~~s~~Ea~~~AD 180 (417)
+||+|||+|.||..+|..|.+. |++|.+.+|+.++ .+...+. |+...+ ....+++++++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~------g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 77 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK------GQSVLAWDIDAQR-IKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDAD 77 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHH-HHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCS
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCHHH-HHHHHhcCCeEEeccccccccccceecCCHHHHHhcCC
Confidence 6999999999999999999998 9998877765433 3333333 431100 01457888889999
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+||+++|+..+.++++++.++++++++|+...|.
T Consensus 78 ~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~~ 111 (359)
T 1bg6_A 78 VILIVVPAIHHASIAANIASYISEGQLIILNPGA 111 (359)
T ss_dssp EEEECSCGGGHHHHHHHHGGGCCTTCEEEESSCC
T ss_pred EEEEeCCchHHHHHHHHHHHhCCCCCEEEEcCCC
Confidence 9999999999999999999999999988777773
No 110
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.99 E-value=1.1e-08 Score=105.44 Aligned_cols=198 Identities=10% Similarity=0.065 Sum_probs=112.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH------------------cCceecCCCcCCHH
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA------------------AGFTEENGTLGDIY 173 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~------------------~G~~~~~~~~~s~~ 173 (417)
+||+|||+|.||.++|..|. . |++|+++++..+ ..+...+ .++.. +.+++
T Consensus 37 mkIaVIGlG~mG~~lA~~La-~------G~~V~~~D~~~~-~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~----ttd~~ 104 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIA-Q------NHEVVALDIVQA-KVDMLNQKISPIVDKEIQEYLAEKPLNFRA----TTDKH 104 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCHH-HHHHHHTTCCSSCCHHHHHHHHHSCCCEEE----ESCHH
T ss_pred CEEEEECcCHHHHHHHHHHH-c------CCeEEEEecCHH-HhhHHhccCCccccccHHHHHhhccCCeEE----EcCHH
Confidence 79999999999999999876 4 889887766533 3333222 12332 46788
Q ss_pred hhcCcCCEEEEccCCc-----------hHHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCC--C
Q 014834 174 ETISGSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKG--M 240 (417)
Q Consensus 174 Ea~~~ADIViLavpd~-----------~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pnt--p 240 (417)
+++++||+||+++|.. ...++++.|.+ +++|++|++.+.+.....+.....+.+. .+...|.. |
T Consensus 105 ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~--~v~~sPe~~~~ 181 (432)
T 3pid_A 105 DAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID--NVIFSPEFLRE 181 (432)
T ss_dssp HHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC--CEEECCCCCCT
T ss_pred HHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc--cEeecCccCCc
Confidence 9999999999999976 34567788999 9999999988876443221101122221 33446743 2
Q ss_pred chhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHH--hCCC-ceeccchhhhhhhhccccchhhhchHHHHH
Q 014834 241 GPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVA--LGSP-FTFATTLEQEYKSDIFGERGILLGAVHGIV 317 (417)
Q Consensus 241 g~~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~a--lG~~-~~iettf~~e~~~dl~ge~t~L~G~~pA~i 317 (417)
+..+..... .+. +.+..+ .+..+.+..++.. ++.. .++.+.... -+.-.+-+.+ +...--+++
T Consensus 182 G~A~~~~l~---------p~r-IvvG~~--~~~~~~~~~ll~~~~~~~~~~v~~~~~~~-AE~~Kl~~N~-~~a~~Ia~~ 247 (432)
T 3pid_A 182 GRALYDNLH---------PSR-IVIGER--SARAERFADLLKEGAIKQDIPTLFTDSTE-AEAIKLFANT-YLALRVAYF 247 (432)
T ss_dssp TSHHHHHHS---------CSC-EEESSC--SHHHHHHHHHHHHHCSSSSCCEEECCHHH-HHHHHHHHHH-HHHHHHHHH
T ss_pred chhhhcccC---------Cce-EEecCC--HHHHHHHHHHHHhhhccCCCeEEecCccH-HHHHHHHHHH-HHHHHHHHH
Confidence 222211111 112 222332 3455667777765 4432 122222111 1111122222 122223345
Q ss_pred HHHHHHHHHcCCCHHHHHHHH
Q 014834 318 ESLFRRFTENGMSEDLAYKNT 338 (417)
Q Consensus 318 ea~~d~~v~~Gl~~e~A~~~~ 338 (417)
--+...+.+.|++.++.++.+
T Consensus 248 nEl~~lae~~GiD~~~v~~~~ 268 (432)
T 3pid_A 248 NELDSYAESQGLNSKQIIEGV 268 (432)
T ss_dssp HHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHH
Confidence 556667778888887766643
No 111
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.99 E-value=4.8e-10 Score=115.21 Aligned_cols=104 Identities=15% Similarity=0.161 Sum_probs=78.7
Q ss_pred hhccccccccc-chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC
Q 014834 93 IVRGGRDLFKL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (417)
Q Consensus 93 ~vr~g~~~f~~-~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s 171 (417)
-+|+|+|.... ...++.| |+|||||+|+||.++|+.++.. |++|+++++..... ..+... ..+
T Consensus 138 ~~~~g~W~~~~~~~~el~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~yd~~~~~~-----~~~~~~----~~s 201 (416)
T 3k5p_A 138 SAHAGGWEKTAIGSREVRG-KTLGIVGYGNIGSQVGNLAESL------GMTVRYYDTSDKLQ-----YGNVKP----AAS 201 (416)
T ss_dssp HHHTTCCCCCCTTCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCCCC-----BTTBEE----CSS
T ss_pred hhhcccccccCCCCccCCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCcchhc-----ccCcEe----cCC
Confidence 46788997543 2478999 9999999999999999999988 99998777643211 123332 568
Q ss_pred HHhhcCcCCEEEEccCCchHH-HHH-HHHHhcCCCCcEEEEec
Q 014834 172 IYETISGSDLVLLLISDAAQA-DNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd~~~~-~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
++|++++||+|++++|..... .++ .+.+..||+|++|+.++
T Consensus 202 l~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~a 244 (416)
T 3k5p_A 202 LDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNA 244 (416)
T ss_dssp HHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECS
T ss_pred HHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECC
Confidence 999999999999999987654 455 36788899999998655
No 112
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.98 E-value=4.1e-10 Score=112.06 Aligned_cols=105 Identities=15% Similarity=0.083 Sum_probs=80.0
Q ss_pred hhhccccccc--ccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCc
Q 014834 92 FIVRGGRDLF--KLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (417)
Q Consensus 92 ~~vr~g~~~f--~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~ 169 (417)
.-+|+|+|.+ ......+.| ++|||||+|.||.++|+.|+.. |++|+++++...+. + +.++. .
T Consensus 126 ~~~~~g~w~~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~-~~~~~-----~ 189 (331)
T 1xdw_A 126 SRTAKKNFKVDAFMFSKEVRN-CTVGVVGLGRIGRVAAQIFHGM------GATVIGEDVFEIKG---I-EDYCT-----Q 189 (331)
T ss_dssp HHHTTTCCCCCSTTCCCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCS---C-TTTCE-----E
T ss_pred HHHHcCCCccccCcCccCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCccHH---H-Hhccc-----c
Confidence 3467788864 122368999 9999999999999999999988 99998877754332 1 12333 3
Q ss_pred CCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 170 GDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 170 ~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
.++++++++||+|++++|.... ..++ ++..+.||+|++|+.++
T Consensus 190 ~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~s 234 (331)
T 1xdw_A 190 VSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCA 234 (331)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECS
T ss_pred CCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECC
Confidence 5899999999999999997653 3455 46778899999988665
No 113
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.98 E-value=3.1e-10 Score=113.03 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=80.0
Q ss_pred hhhccccccc--ccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCc
Q 014834 92 FIVRGGRDLF--KLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (417)
Q Consensus 92 ~~vr~g~~~f--~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~ 169 (417)
.-+|+|+|.+ ......+.| ++|||||+|.||.++|+.|+.. |++|+++++...+. + +.++. .
T Consensus 125 ~~~~~g~w~~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~-~~~~~-----~ 188 (333)
T 1dxy_A 125 AQLQAGDYEKAGTFIGKELGQ-QTVGVMGTGHIGQVAIKLFKGF------GAKVIAYDPYPMKG---D-HPDFD-----Y 188 (333)
T ss_dssp HHHHTTCHHHHTCCCCCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSS---C-CTTCE-----E
T ss_pred HHHHcCCcccccCCCccCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCcchh---h-Hhccc-----c
Confidence 3467788754 222378999 9999999999999999999988 99998777654332 1 12233 3
Q ss_pred CCHHhhcCcCCEEEEccCCchH-HHHH-HHHHhcCCCCcEEEEec
Q 014834 170 GDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 170 ~s~~Ea~~~ADIViLavpd~~~-~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
.+++|++++||+|++++|.... ..++ ++.++.||+|++|+.++
T Consensus 189 ~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~s 233 (333)
T 1dxy_A 189 VSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTA 233 (333)
T ss_dssp CCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred CCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECC
Confidence 5889999999999999998764 4556 46778899999988554
No 114
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.91 E-value=4e-08 Score=97.65 Aligned_cols=152 Identities=13% Similarity=0.139 Sum_probs=114.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChh----------hHHHHHHcCceecC----------CCcCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR----------SFAEARAAGFTEEN----------GTLGD 171 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~----------s~~~A~~~G~~~~~----------~~~~s 171 (417)
.||+|||.|.||..+|..+..+ |++|++.+...+. .+....+.|..... ..+.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~------G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~ 80 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTN 80 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECC
T ss_pred CeEEEECCcHHHHHHHHHHHhC------CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccc
Confidence 7999999999999999999999 9999888765321 11112223321100 01457
Q ss_pred HHhhcCcCCEEEEccCCchH--HHHHHHHHhcCCCCcEEE-EecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHH
Q 014834 172 IYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd~~~--~~Vl~eI~~~lk~gaiLi-~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly 248 (417)
++|++++||+|+=++|-... .++|.+|-++.+|+++|. -++++.+..+.+ .....-+|+..||=-|.+.
T Consensus 81 l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~---~~~~p~r~ig~HffNP~~~----- 152 (319)
T 3ado_A 81 LAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT---GLAHVKQCIVAHPVNPPYY----- 152 (319)
T ss_dssp HHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT---TCTTGGGEEEEEECSSTTT-----
T ss_pred hHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhh---hccCCCcEEEecCCCCccc-----
Confidence 88999999999999997665 369999999999999875 778888877765 2333348999999888887
Q ss_pred hhcccccCCCceEE-EeecCCCCHHHHHHHHHHHHHhCCC
Q 014834 249 VQGKEINGAGINSS-FAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 249 ~~G~~~~G~Gv~~l-iav~~dvsgea~e~a~~L~~alG~~ 287 (417)
|+.+ +.++...+.+..+.+.++...+|..
T Consensus 153 ----------m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~ 182 (319)
T 3ado_A 153 ----------IPLVELVPHPETSPATVDRTHALMRKIGQS 182 (319)
T ss_dssp ----------CCEEEEEECTTCCHHHHHHHHHHHHHTTCE
T ss_pred ----------cchHHhcCCCCCcHHHHHHHHHHHHHhCCc
Confidence 3332 3457778889999999999999964
No 115
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.91 E-value=4.8e-08 Score=99.22 Aligned_cols=94 Identities=13% Similarity=0.043 Sum_probs=68.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec------------C--CCcCCHHhhcC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE------------N--GTLGDIYETIS 177 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~------------~--~~~~s~~Ea~~ 177 (417)
+||+|||+|.||.++|..|.+ |++|++.+++. ...+...+.+.... . ....+..++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-------G~~V~~~d~~~-~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~ 72 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-------QNEVTIVDILP-SKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYK 72 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEECSCH-HHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-------CCEEEEEECCH-HHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhc
Confidence 589999999999999999874 67887776653 33344443343100 0 01346778889
Q ss_pred cCCEEEEccCCc-----------hHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 178 GSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 178 ~ADIViLavpd~-----------~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
++|+||+++|+. ...+++++|.+ ++++++|++.+..
T Consensus 73 ~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~ 119 (402)
T 1dlj_A 73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTI 119 (402)
T ss_dssp HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCC
T ss_pred CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCC
Confidence 999999999987 46788889999 9999988874433
No 116
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.82 E-value=7.5e-09 Score=104.17 Aligned_cols=94 Identities=18% Similarity=0.241 Sum_probs=70.9
Q ss_pred CCEEEEEcccchHHHHHHHHHh-hhhhhcCCcEEEEEe---cCChhhHHHH-HHcCcee----cCC-----------CcC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGL---RKGSRSFAEA-RAAGFTE----ENG-----------TLG 170 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~-s~~~~~~G~~ViVg~---r~~s~s~~~A-~~~G~~~----~~~-----------~~~ 170 (417)
|+||+|||+|+||.++|..|.. . |++|.+++ |. ....+.+ ++.|... .++ ...
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~------G~~V~~~~~~~r~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 74 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD------GVEVRVLTLFADE-AERWTKALGADELTVIVNEKDGTQTEVKSRPKVITK 74 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST------TEEEEEECCSTTH-HHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEES
T ss_pred CceEEEECCCHHHHHHHHHHHhCC------CCEEEEEeCCCCc-HHHHHHHHhhccceeeeecCCCccceeeccceEEeC
Confidence 3699999999999999999976 7 88998877 43 2233332 3333110 001 235
Q ss_pred CHHhhcCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 171 DIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 171 s~~Ea~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+++++++++|+||++||+....+++++|.++++++++|+..
T Consensus 75 ~~~~a~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 75 DPEIAISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGL 115 (404)
T ss_dssp CHHHHHTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEET
T ss_pred CHHHHhCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEc
Confidence 68888999999999999999999999999999999887753
No 117
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.82 E-value=1.1e-07 Score=99.33 Aligned_cols=202 Identities=19% Similarity=0.168 Sum_probs=117.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCCh----hhHHHHH--------------------HcC-ce
Q 014834 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGS----RSFAEAR--------------------AAG-FT 163 (417)
Q Consensus 110 gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s----~s~~~A~--------------------~~G-~~ 163 (417)
-++||+|||+|.||.++|.+|.+. .|+ +|++++++.+ +...... ..| +.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~-----~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~ 91 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADA-----PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFE 91 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHS-----TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHh-----CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeE
Confidence 358999999999999999999875 268 8988877654 2211111 012 22
Q ss_pred ecCCCcCCHHhhcCcCCEEEEccCCch------------HHHHHHHHHhcCCCCcEEEEecCchhhh---hh------hc
Q 014834 164 EENGTLGDIYETISGSDLVLLLISDAA------------QADNYEKIFSCMKPNSILGLSHGFLLGH---LQ------SI 222 (417)
Q Consensus 164 ~~~~~~~s~~Ea~~~ADIViLavpd~~------------~~~Vl~eI~~~lk~gaiLi~a~G~~i~~---~~------~~ 222 (417)
. ..+ .+++++||+||+++|... ...+.+.|.+++++|++|++.+++.... +. ..
T Consensus 92 ~----ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~ 166 (478)
T 3g79_A 92 C----TPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEES 166 (478)
T ss_dssp E----ESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHH
T ss_pred E----eCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhc
Confidence 1 234 688999999999998653 3455678999999999999888764321 11 11
Q ss_pred ccCCCCCccEEEeccC--CCchhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHh-CCCceeccchhhhhh
Q 014834 223 GLDFPKNIGVIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYK 299 (417)
Q Consensus 223 ~i~~~~dv~VI~v~Pn--tpg~~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~al-G~~~~iettf~~e~~ 299 (417)
+.....++ .+.-.|. .+|..+..... .+.++ ... +.+..+.+..++..+ +...+.-+.. ..-+
T Consensus 167 g~~~~~d~-~v~~~Pe~~~~G~a~~~~~~---------~~~Iv-~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~-~~aE 232 (478)
T 3g79_A 167 GLKAGEDF-ALAHAPERVMVGRLLKNIRE---------HDRIV-GGI--DEASTKRAVELYSPVLTVGQVIPMSA-TAAE 232 (478)
T ss_dssp CCCBTTTB-EEEECCCCCCTTSHHHHHHH---------SCEEE-EES--SHHHHHHHHHHHGGGCSSCCEEEEEH-HHHH
T ss_pred CCCcCCce-eEEeCCccCCccchhhhhcC---------CcEEE-EeC--CHHHHHHHHHHHhhhccCCeEEeCCH-HHHH
Confidence 11112232 3456673 34443322221 12322 232 456778999999999 6542222211 1111
Q ss_pred hhccccchhhhchHHHHHHHHHHHHHHcCCCHHHHHH
Q 014834 300 SDIFGERGILLGAVHGIVESLFRRFTENGMSEDLAYK 336 (417)
Q Consensus 300 ~dl~ge~t~L~G~~pA~iea~~d~~v~~Gl~~e~A~~ 336 (417)
.-.+-+.+ +...--+++--+...+.+.|++.++.++
T Consensus 233 ~~Kl~~N~-~~a~~Ia~~nE~~~l~e~~GiD~~~v~~ 268 (478)
T 3g79_A 233 VTKTAENT-FRDLQIAAINQLALYCEAMGINVYDVRT 268 (478)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 11122222 1222233555567777888999887666
No 118
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.81 E-value=1.5e-07 Score=97.13 Aligned_cols=202 Identities=11% Similarity=0.095 Sum_probs=116.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhh-------------
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYET------------- 175 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea------------- 175 (417)
.| .|..|||+|.||.++|.+|.+. |++|++++++.++ .+... .|.... ....++|+
T Consensus 10 ~~-~~~~ViGlGyvGlp~A~~La~~------G~~V~~~D~~~~k-v~~L~-~g~~pi--~epgl~~ll~~~~~~g~l~~t 78 (431)
T 3ojo_A 10 HG-SKLTVVGLGYIGLPTSIMFAKH------GVDVLGVDINQQT-IDKLQ-NGQISI--EEPGLQEVYEEVLSSGKLKVS 78 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSCHHH-HHHHH-TTCCSS--CCTTHHHHHHHHHHTTCEEEE
T ss_pred cC-CccEEEeeCHHHHHHHHHHHHC------CCEEEEEECCHHH-HHHHH-CCCCCc--CCCCHHHHHHhhcccCceEEe
Confidence 35 8999999999999999999999 9999877776433 33322 232110 00011111
Q ss_pred --cCcCCEEEEccCCch------------HHHHHHHHHhcCCCCcEEEEecCchhhhhh-------h-cccCCCCCccEE
Q 014834 176 --ISGSDLVLLLISDAA------------QADNYEKIFSCMKPNSILGLSHGFLLGHLQ-------S-IGLDFPKNIGVI 233 (417)
Q Consensus 176 --~~~ADIViLavpd~~------------~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~-------~-~~i~~~~dv~VI 233 (417)
+++||+||+|||... ...+.+.|.+++++|++|++.+++.....+ + .+.....++ .+
T Consensus 79 td~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~-~v 157 (431)
T 3ojo_A 79 TTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDI-YL 157 (431)
T ss_dssp SSCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTE-EE
T ss_pred CchhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCe-EE
Confidence 458999999999654 345567899999999999988876432111 1 111112232 34
Q ss_pred Eecc--CCCchhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhc
Q 014834 234 AVCP--KGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLG 311 (417)
Q Consensus 234 ~v~P--ntpg~~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G 311 (417)
.-.| -.||..+..... .+.++. .. +.++.+.+..++..++...++.++.. .-+.-.+-+.+. ..
T Consensus 158 ~~~Pe~~~~G~A~~~~~~---------p~~Iv~-G~--~~~~~~~~~~ly~~~~~~~~~~~~~~-~AE~~Kl~~N~~-~a 223 (431)
T 3ojo_A 158 VHCPERVLPGKILEELVH---------NNRIIG-GV--TKACIEAGKRVYRTFVQGEMIETDAR-TAEMSKLMENTY-RD 223 (431)
T ss_dssp EECCCCCCTTSHHHHHHH---------SCEEEE-ES--SHHHHHHHHHHHTTTCCSCEEEEEHH-HHHHHHHHHHHH-HH
T ss_pred EECCCcCCCcchhhcccC---------CCEEEE-eC--CHHHHHHHHHHHHHHhCCcEEeCCHH-HHHHHHHHHHHH-HH
Confidence 5566 233443222211 223222 33 56889999999999986433222211 111111222221 12
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHH
Q 014834 312 AVHGIVESLFRRFTENGMSEDLAYK 336 (417)
Q Consensus 312 ~~pA~iea~~d~~v~~Gl~~e~A~~ 336 (417)
.--+++--+...+.+.|++.++..+
T Consensus 224 ~~Ia~~nE~~~l~e~~GiD~~~v~~ 248 (431)
T 3ojo_A 224 VNIALANELTKICNNLNINVLDVIE 248 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 2233555566777888888877665
No 119
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.79 E-value=1.8e-08 Score=104.91 Aligned_cols=95 Identities=16% Similarity=0.081 Sum_probs=74.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC--------------------ceecCCCc
Q 014834 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--------------------FTEENGTL 169 (417)
Q Consensus 110 gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G--------------------~~~~~~~~ 169 (417)
|-+||+|||+|.||.++|..|.+. |++|+++++.. ...+...+.+ +.. +
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~------G~~V~~~d~~~-~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~----t 75 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI------GHDVFCLDVDQ-AKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF----S 75 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----E
T ss_pred CCceEEEECcCHHHHHHHHHHHhC------CCEEEEEECCH-HHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE----E
Confidence 348999999999999999999999 99988776653 3334333321 111 3
Q ss_pred CCHHhhcCcCCEEEEccCC----------chHHHHHHHHHhcCCCCcEEEEecCch
Q 014834 170 GDIYETISGSDLVLLLISD----------AAQADNYEKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 170 ~s~~Ea~~~ADIViLavpd----------~~~~~Vl~eI~~~lk~gaiLi~a~G~~ 215 (417)
.++++++++||+||+++|. ....+++++|.++++++++|+..+++.
T Consensus 76 td~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~ 131 (478)
T 2y0c_A 76 TDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVP 131 (478)
T ss_dssp CCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCC
T ss_pred CCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcC
Confidence 5677889999999999997 677789999999999999988877763
No 120
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.77 E-value=2.7e-08 Score=97.20 Aligned_cols=110 Identities=21% Similarity=0.161 Sum_probs=78.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecC-CC-----cCCHHhhcCcCCEEEEc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-GT-----LGDIYETISGSDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~-~~-----~~s~~Ea~~~ADIViLa 185 (417)
+||+|||+|+||.++|..|. + |.+|.+..|... ..+..++.|+.... +. .....+++..+|+||++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~------g~~V~~~~r~~~-~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vila 74 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L------YHDVTVVTRRQE-QAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVT 74 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCHH-HHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHh-c------CCceEEEECCHH-HHHHHHhCCceEecCCCeecccccccccccCCCCEEEEE
Confidence 79999999999999999999 8 999988777643 34444556876410 00 00013467889999999
Q ss_pred cCCchHHHHHHHHHhcCCCCcEEEEecCchhh-hhhhcccCCCCCccEEE
Q 014834 186 ISDAAQADNYEKIFSCMKPNSILGLSHGFLLG-HLQSIGLDFPKNIGVIA 234 (417)
Q Consensus 186 vpd~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~-~~~~~~i~~~~dv~VI~ 234 (417)
||+....++++.+.+. .++++|++..|+... .+.+ .+|.+ +++.
T Consensus 75 vK~~~~~~~l~~l~~~-~~~~ivs~~nGi~~~e~l~~---~~~~~-~vl~ 119 (307)
T 3ego_A 75 VKQHQLQSVFSSLERI-GKTNILFLQNGMGHIHDLKD---WHVGH-SIYV 119 (307)
T ss_dssp CCGGGHHHHHHHTTSS-CCCEEEECCSSSHHHHHHHT---CCCSC-EEEE
T ss_pred eCHHHHHHHHHHhhcC-CCCeEEEecCCccHHHHHHH---hCCCC-cEEE
Confidence 9999999999988875 566666788999864 4443 34543 4443
No 121
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.77 E-value=3.8e-09 Score=107.34 Aligned_cols=90 Identities=16% Similarity=0.162 Sum_probs=70.9
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
..+.| ++|||||+|+||.++|+.|+.. |++|+++++... . ...|.. ..+++|++++||+|+++
T Consensus 112 ~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~----~-~~~g~~-----~~~l~ell~~aDvV~l~ 174 (380)
T 2o4c_A 112 ADLAE-RTYGVVGAGQVGGRLVEVLRGL------GWKVLVCDPPRQ----A-REPDGE-----FVSLERLLAEADVISLH 174 (380)
T ss_dssp CCGGG-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECHHHH----H-HSTTSC-----CCCHHHHHHHCSEEEEC
T ss_pred cccCC-CEEEEEeCCHHHHHHHHHHHHC------CCEEEEEcCChh----h-hccCcc-----cCCHHHHHHhCCEEEEe
Confidence 46889 9999999999999999999988 999877654311 1 123433 46899999999999999
Q ss_pred cCCchH-----HHHHH-HHHhcCCCCcEEEEec
Q 014834 186 ISDAAQ-----ADNYE-KIFSCMKPNSILGLSH 212 (417)
Q Consensus 186 vpd~~~-----~~Vl~-eI~~~lk~gaiLi~a~ 212 (417)
+|.... ..++. ++.+.||+|++|+.++
T Consensus 175 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~s 207 (380)
T 2o4c_A 175 TPLNRDGEHPTRHLLDEPRLAALRPGTWLVNAS 207 (380)
T ss_dssp CCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECS
T ss_pred ccCccccccchhhhcCHHHHhhCCCCcEEEECC
Confidence 997664 34553 6788999999988554
No 122
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.75 E-value=4.7e-09 Score=101.20 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=72.8
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEcc
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
.++| ++|+|||+|.||.+++..|.+. |.+|.+++|+.++..+.+.+.|+.. ..+..++++++|+||+++
T Consensus 126 ~~~~-~~v~iiGaG~~g~aia~~L~~~------g~~V~v~~r~~~~~~~l~~~~g~~~----~~~~~~~~~~aDiVi~at 194 (275)
T 2hk9_A 126 EVKE-KSILVLGAGGASRAVIYALVKE------GAKVFLWNRTKEKAIKLAQKFPLEV----VNSPEEVIDKVQVIVNTT 194 (275)
T ss_dssp TGGG-SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSHHHHHHHTTTSCEEE----CSCGGGTGGGCSEEEECS
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHc------CCEEEEEECCHHHHHHHHHHcCCee----ehhHHhhhcCCCEEEEeC
Confidence 4678 9999999999999999999998 8888888887555455555567653 347788899999999999
Q ss_pred CCchHHHHHHHH-HhcCCCCcEEEEecC
Q 014834 187 SDAAQADNYEKI-FSCMKPNSILGLSHG 213 (417)
Q Consensus 187 pd~~~~~Vl~eI-~~~lk~gaiLi~a~G 213 (417)
|+....++...+ .+.++++++|++...
T Consensus 195 p~~~~~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 195 SVGLKDEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp STTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 988653211112 356788888876554
No 123
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.74 E-value=3.7e-09 Score=107.51 Aligned_cols=151 Identities=17% Similarity=0.140 Sum_probs=96.6
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
..+.| ++|||||+|+||.++|+.|+.. |++|+++++.. . ....+.. ..+++|++++||+|+++
T Consensus 115 ~~l~g-ktvGIIGlG~IG~~vA~~l~a~------G~~V~~~d~~~----~-~~~~~~~-----~~sl~ell~~aDiV~l~ 177 (381)
T 3oet_A 115 FSLRD-RTIGIVGVGNVGSRLQTRLEAL------GIRTLLCDPPR----A-ARGDEGD-----FRTLDELVQEADVLTFH 177 (381)
T ss_dssp CCGGG-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECHHH----H-HTTCCSC-----BCCHHHHHHHCSEEEEC
T ss_pred CccCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCh----H-HhccCcc-----cCCHHHHHhhCCEEEEc
Confidence 46889 9999999999999999999998 99988775521 1 1112322 56899999999999999
Q ss_pred cCCchH-----HHHH-HHHHhcCCCCcEEEEec-Cchh------hhhhhcccCCCCCccEEEeccCCCchhHHHHHhhcc
Q 014834 186 ISDAAQ-----ADNY-EKIFSCMKPNSILGLSH-GFLL------GHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK 252 (417)
Q Consensus 186 vpd~~~-----~~Vl-~eI~~~lk~gaiLi~a~-G~~i------~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly~~G~ 252 (417)
+|.... ..++ .+.+..||+|++|+.++ |-.+ ..+++ +-.....+||.--.|.-+. .++.
T Consensus 178 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~-g~i~gA~LDV~e~EP~~~~----~L~~--- 249 (381)
T 3oet_A 178 TPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNA-GQPLSVVLDVWEGEPDLNV----ALLE--- 249 (381)
T ss_dssp CCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHT-TCCEEEEESCCTTTTSCCH----HHHH---
T ss_pred CcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHh-CCCeEEEeeccccCCCCcc----hhhh---
Confidence 996654 3445 35778899999999665 4321 12222 1111123456656664322 2343
Q ss_pred cccCCCceEEEeecC-CCCHHHHHH-----HHHHHHHhCCC
Q 014834 253 EINGAGINSSFAVHQ-DVDGRATNV-----ALGWSVALGSP 287 (417)
Q Consensus 253 ~~~G~Gv~~liav~~-dvsgea~e~-----a~~L~~alG~~ 287 (417)
.+.+++||- ..|.++.+. +..+..-++..
T Consensus 250 ------~~~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~~ 284 (381)
T 3oet_A 250 ------AVDIGTSHIAGYTLEGKARGTTQVFEAYSAFIGRE 284 (381)
T ss_dssp ------HSSEECSSCTTCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ------CCEEECCccCcCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 224688886 344454443 34555666654
No 124
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.72 E-value=2e-08 Score=100.13 Aligned_cols=104 Identities=19% Similarity=0.113 Sum_probs=78.8
Q ss_pred hccccccccc--chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC
Q 014834 94 VRGGRDLFKL--LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (417)
Q Consensus 94 vr~g~~~f~~--~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s 171 (417)
++.|+|.... ....+.| ++|||||+|.+|..+|+.++.. |++|+++++... +...+.++. ..+
T Consensus 123 ~~~~~~~~~~~~~~~~l~g-~tvGIiG~G~IG~~va~~~~~f------g~~v~~~d~~~~---~~~~~~~~~-----~~~ 187 (334)
T 3kb6_A 123 VKKLNFSQDSEILARELNR-LTLGVIGTGRIGSRVAMYGLAF------GMKVLCYDVVKR---EDLKEKGCV-----YTS 187 (334)
T ss_dssp HHTTCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCC---HHHHHTTCE-----ECC
T ss_pred ccccccccccccccceecC-cEEEEECcchHHHHHHHhhccc------CceeeecCCccc---hhhhhcCce-----ecC
Confidence 4555554322 2478999 9999999999999999999988 999987665432 233455666 468
Q ss_pred HHhhcCcCCEEEEccCCchHH-HHHH-HHHhcCCCCcEEEEec
Q 014834 172 IYETISGSDLVLLLISDAAQA-DNYE-KIFSCMKPNSILGLSH 212 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd~~~~-~Vl~-eI~~~lk~gaiLi~a~ 212 (417)
.+|++++||+|++++|-.... .++. +.+..||+|++|+-++
T Consensus 188 l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~a 230 (334)
T 3kb6_A 188 LDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTA 230 (334)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred HHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecC
Confidence 999999999999999976553 4554 5778899999988443
No 125
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.71 E-value=2.6e-08 Score=87.27 Aligned_cols=110 Identities=7% Similarity=-0.028 Sum_probs=79.6
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccC
Q 014834 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavp 187 (417)
++|+|||+ |+||..++++|++. |++|+..+..... -.|... ..+++|+.+..|++++++|
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~------G~~V~~vnp~~~~------i~G~~~----~~s~~el~~~vDlvii~vp 78 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSK------GFEVLPVNPNYDE------IEGLKC----YRSVRELPKDVDVIVFVVP 78 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT------TCEEEEECTTCSE------ETTEEC----BSSGGGSCTTCCEEEECSC
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHC------CCEEEEeCCCCCe------ECCeee----cCCHHHhCCCCCEEEEEeC
Confidence 89999999 99999999999999 9986554443211 157764 5689999999999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchh
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~ 243 (417)
+....++++++.. ...+.+|++++++.-...+. .-..++. .+.||+++-.
T Consensus 79 ~~~v~~v~~~~~~-~g~~~i~~~~~~~~~~l~~~---a~~~Gi~--~igpnc~g~~ 128 (138)
T 1y81_A 79 PKVGLQVAKEAVE-AGFKKLWFQPGAESEEIRRF---LEKAGVE--YSFGRCIMVE 128 (138)
T ss_dssp HHHHHHHHHHHHH-TTCCEEEECTTSCCHHHHHH---HHHHTCE--EECSCCHHHH
T ss_pred HHHHHHHHHHHHH-cCCCEEEEcCccHHHHHHHH---HHHCCCE--EEcCCcceEE
Confidence 9888999988766 45566777777764221111 0012344 4569998866
No 126
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.71 E-value=4.1e-08 Score=95.27 Aligned_cols=94 Identities=17% Similarity=0.250 Sum_probs=71.7
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
..+.| ++|+|||+|.||.++++.|+.. |.+|+++++...+ .+.+.+.|+... ...+.+++++++|+|+++
T Consensus 151 ~~l~g-~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 151 FTIHG-ANVAVLGLGRVGMSVARKFAAL------GAKVKVGARESDL-LARIAEMGMEPF--HISKAAQELRDVDVCINT 220 (293)
T ss_dssp SCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSHHH-HHHHHHTTSEEE--EGGGHHHHTTTCSEEEEC
T ss_pred CCCCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEECCHHH-HHHHHHCCCeec--ChhhHHHHhcCCCEEEEC
Confidence 46788 9999999999999999999988 9999888876433 344456676530 014678889999999999
Q ss_pred cCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 186 vpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+|+....+ +....|+++.+|+..+
T Consensus 221 ~p~~~i~~---~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 221 IPALVVTA---NVLAEMPSHTFVIDLA 244 (293)
T ss_dssp CSSCCBCH---HHHHHSCTTCEEEECS
T ss_pred CChHHhCH---HHHHhcCCCCEEEEec
Confidence 99854422 3455789999988665
No 127
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.69 E-value=5.3e-08 Score=94.71 Aligned_cols=94 Identities=21% Similarity=0.346 Sum_probs=72.0
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
..+.| ++|+|||+|.||.++++.|+.. |.+|+++++...+ .+.+.+.|+... ...+.+++++++|+|+++
T Consensus 153 ~~l~g-~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~d~~~~~-~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 153 YTIHG-SQVAVLGLGRTGMTIARTFAAL------GANVKVGARSSAH-LARITEMGLVPF--HTDELKEHVKDIDICINT 222 (300)
T ss_dssp SCSTT-SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSHHH-HHHHHHTTCEEE--EGGGHHHHSTTCSEEEEC
T ss_pred CCCCC-CEEEEEcccHHHHHHHHHHHHC------CCEEEEEECCHHH-HHHHHHCCCeEE--chhhHHHHhhCCCEEEEC
Confidence 57889 9999999999999999999988 9999888876433 333445676420 024688899999999999
Q ss_pred cCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 186 vpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+|+.... ++....|++|.+|++.+
T Consensus 223 ~p~~~i~---~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 223 IPSMILN---QTVLSSMTPKTLILDLA 246 (300)
T ss_dssp CSSCCBC---HHHHTTSCTTCEEEECS
T ss_pred CChhhhC---HHHHHhCCCCCEEEEEe
Confidence 9985432 23557799999988654
No 128
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.69 E-value=1.3e-08 Score=106.41 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=77.6
Q ss_pred cccccccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHh
Q 014834 95 RGGRDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE 174 (417)
Q Consensus 95 r~g~~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~E 174 (417)
++| |....+ ..+.| ++|+|||+|.||.++|+.|+.. |.+|+++++... ....+...|+. ..++++
T Consensus 244 ~~g-w~r~~~-~~l~G-ktVgIIG~G~IG~~vA~~l~~~------G~~Viv~d~~~~-~~~~a~~~g~~-----~~~l~e 308 (479)
T 1v8b_A 244 PDG-LMRATD-FLISG-KIVVICGYGDVGKGCASSMKGL------GARVYITEIDPI-CAIQAVMEGFN-----VVTLDE 308 (479)
T ss_dssp HHH-HHHHHC-CCCTT-SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSCHH-HHHHHHTTTCE-----ECCHHH
T ss_pred hhh-hhhccc-cccCC-CEEEEEeeCHHHHHHHHHHHhC------cCEEEEEeCChh-hHHHHHHcCCE-----ecCHHH
Confidence 445 654333 57899 9999999999999999999998 999987776532 22345667886 468999
Q ss_pred hcCcCCEEEEccCCchHHHHH-HHHHhcCCCCcEEEEecCch
Q 014834 175 TISGSDLVLLLISDAAQADNY-EKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 175 a~~~ADIViLavpd~~~~~Vl-~eI~~~lk~gaiLi~a~G~~ 215 (417)
++++||+|++++... .++ .+.++.||+|++|+.++-..
T Consensus 309 ll~~aDiVi~~~~t~---~lI~~~~l~~MK~gailiNvgrg~ 347 (479)
T 1v8b_A 309 IVDKGDFFITCTGNV---DVIKLEHLLKMKNNAVVGNIGHFD 347 (479)
T ss_dssp HTTTCSEEEECCSSS---SSBCHHHHTTCCTTCEEEECSSTT
T ss_pred HHhcCCEEEECCChh---hhcCHHHHhhcCCCcEEEEeCCCC
Confidence 999999999997432 233 35677899999999665443
No 129
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.67 E-value=2e-07 Score=78.34 Aligned_cols=97 Identities=12% Similarity=0.025 Sum_probs=66.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHH----hhcCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY----ETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~----Ea~~~ADIViLavp 187 (417)
++|.|||+|.+|..+++.|.+. |++|++.+++.++........|+....+...+.+ ..++++|+|++++|
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~------g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK------GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTG 78 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence 7899999999999999999998 9998887775443333333446532111122322 22678999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+......+..+.+.+.++.+|+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~ii~~~~~~ 105 (140)
T 1lss_A 79 KEEVNLMSSLLAKSYGINKTIARISEI 105 (140)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred CchHHHHHHHHHHHcCCCEEEEEecCH
Confidence 876655555666667777777655554
No 130
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.66 E-value=1.3e-08 Score=106.65 Aligned_cols=99 Identities=18% Similarity=0.125 Sum_probs=75.4
Q ss_pred cccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCc
Q 014834 99 DLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG 178 (417)
Q Consensus 99 ~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ 178 (417)
|....+ ..+.| ++|+|||+|.||.++|+.|+.. |.+|+++++...+ ...+...|+. ..+++|++++
T Consensus 267 w~~~~g-~~L~G-ktVgIIG~G~IG~~vA~~l~~~------G~~V~v~d~~~~~-~~~a~~~G~~-----~~~l~ell~~ 332 (494)
T 3d64_A 267 IKRATD-VMIAG-KIAVVAGYGDVGKGCAQSLRGL------GATVWVTEIDPIC-ALQAAMEGYR-----VVTMEYAADK 332 (494)
T ss_dssp HHHHHC-CCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSCHHH-HHHHHTTTCE-----ECCHHHHTTT
T ss_pred hhhccc-cccCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCChHh-HHHHHHcCCE-----eCCHHHHHhc
Confidence 644333 57899 9999999999999999999988 9999887765332 2245566876 4589999999
Q ss_pred CCEEEEccCCchHHHHH-HHHHhcCCCCcEEEEecCc
Q 014834 179 SDLVLLLISDAAQADNY-EKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 179 ADIViLavpd~~~~~Vl-~eI~~~lk~gaiLi~a~G~ 214 (417)
||+|++++... .++ .+.++.||+|++|+.++-.
T Consensus 333 aDiVi~~~~t~---~lI~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 333 ADIFVTATGNY---HVINHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp CSEEEECSSSS---CSBCHHHHHHCCTTEEEEECSSS
T ss_pred CCEEEECCCcc---cccCHHHHhhCCCCcEEEEcCCC
Confidence 99999998432 233 3567789999999955543
No 131
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.64 E-value=3.1e-07 Score=93.71 Aligned_cols=97 Identities=14% Similarity=0.162 Sum_probs=71.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--------EEEEEecCChh----hHHHHHHc--------CceecC--CCc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--------VVKVGLRKGSR----SFAEARAA--------GFTEEN--GTL 169 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--------~ViVg~r~~s~----s~~~A~~~--------G~~~~~--~~~ 169 (417)
.||+|||.|+.|.|+|.-|.++ |. +|.+|.|+.+. ..+.-... |+...+ ...
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n------g~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t 108 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN------CKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVAN 108 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHc------CCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEe
Confidence 4899999999999999999987 53 48888765331 11111111 111100 014
Q ss_pred CCHHhhcCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEE-EecCc
Q 014834 170 GDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGF 214 (417)
Q Consensus 170 ~s~~Ea~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi-~a~G~ 214 (417)
.|+++++++||+||+++|.+...++++++.++++++..|+ .+-|+
T Consensus 109 ~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 109 PDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp SCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred CCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEecccc
Confidence 5789999999999999999999999999999999998655 55676
No 132
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.64 E-value=1.6e-08 Score=87.56 Aligned_cols=89 Identities=20% Similarity=0.165 Sum_probs=68.5
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc
Q 014834 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 110 gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~ 189 (417)
| ++|+|||+|.||.++++.|+.. |++|.+++|+.++..+.+++.|.... ...+..++++++|+||.++|..
T Consensus 21 ~-~~v~iiG~G~iG~~~a~~l~~~------g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 21 G-NKILLVGNGMLASEIAPYFSYP------QYKVTVAGRNIDHVRAFAEKYEYEYV--LINDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp C-CEEEEECCSHHHHHHGGGCCTT------TCEEEEEESCHHHHHHHHHHHTCEEE--ECSCHHHHHHTCSEEEECSCCS
T ss_pred C-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEcCCHHHHHHHHHHhCCceE--eecCHHHHhcCCCEEEEeCCCC
Confidence 7 9999999999999999999988 88888888876666666777775420 1457889999999999999976
Q ss_pred hHHHHHHHHHhcCCCCcEEEEe
Q 014834 190 AQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 190 ~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
.. ++. ...+++|.++++.
T Consensus 92 ~~--~~~--~~~l~~g~~vid~ 109 (144)
T 3oj0_A 92 TP--IVE--ERSLMPGKLFIDL 109 (144)
T ss_dssp SC--SBC--GGGCCTTCEEEEC
T ss_pred Cc--Eee--HHHcCCCCEEEEc
Confidence 32 111 2557788887754
No 133
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.63 E-value=4.1e-08 Score=96.44 Aligned_cols=91 Identities=12% Similarity=0.146 Sum_probs=69.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcC--ceecCCCcCCHHhhcCcCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG--FTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G--~~~~~~~~~s~~Ea~~~ADIViLavpd 188 (417)
++|+|||+|.||.+++++|.+. .|+ +|.+++|+.++..+.+.+.+ +.. +.+++|+++++|+|+++||.
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~-----~g~~~V~v~dr~~~~~~~l~~~~~~~~~~----~~~~~e~v~~aDiVi~atp~ 206 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQ-----FSFKEVRIWNRTKENAEKFADTVQGEVRV----CSSVQEAVAGADVIITVTLA 206 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CCCSEEEEECSSHHHHHHHHHHSSSCCEE----CSSHHHHHTTCSEEEECCCC
T ss_pred cEEEEECCcHHHHHHHHHHHHh-----CCCcEEEEEcCCHHHHHHHHHHhhCCeEE----eCCHHHHHhcCCEEEEEeCC
Confidence 8999999999999999999764 155 78888887666566666666 554 56899999999999999995
Q ss_pred chHHHHHHHHHhcCCCCcEEEEecCch
Q 014834 189 AAQADNYEKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiLi~a~G~~ 215 (417)
. ..++.. +.+++|++|++.+++.
T Consensus 207 ~--~~v~~~--~~l~~g~~vi~~g~~~ 229 (312)
T 2i99_A 207 T--EPILFG--EWVKPGAHINAVGASR 229 (312)
T ss_dssp S--SCCBCG--GGSCTTCEEEECCCCS
T ss_pred C--CcccCH--HHcCCCcEEEeCCCCC
Confidence 3 223322 5788999888766553
No 134
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.59 E-value=3.5e-09 Score=102.53 Aligned_cols=97 Identities=12% Similarity=0.138 Sum_probs=71.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhc-CcCCEEEEccCCch
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~-~~ADIViLavpd~~ 190 (417)
+||+|||+|+||.++|..|.++ |.+|.++.|..+. .+.....|... .....+..+.+ +.+|+||++||+..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~------g~~V~~~~r~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~~~D~vilavk~~~ 74 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS------LPHTTLIGRHAKT-ITYYTVPHAPA-QDIVVKGYEDVTNTFDVIIIAVKTHQ 74 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------CTTCEEEESSCEE-EEEESSTTSCC-EEEEEEEGGGCCSCEEEEEECSCGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHC------CCeEEEEEeccCc-EEEEecCCeec-cceecCchHhcCCCCCEEEEeCCccC
Confidence 7999999999999999999999 9888888876432 11112234211 00012344554 88999999999999
Q ss_pred HHHHHHHHHhcCCCCcE-EEEecCchh
Q 014834 191 QADNYEKIFSCMKPNSI-LGLSHGFLL 216 (417)
Q Consensus 191 ~~~Vl~eI~~~lk~gai-Li~a~G~~i 216 (417)
..++++++.++++++++ |++..|+..
T Consensus 75 ~~~~l~~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 75 LDAVIPHLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp HHHHGGGHHHHEEEEEEEEECCSSCCC
T ss_pred HHHHHHHHHHhhCCCCEEEEeccCccc
Confidence 99999999999988875 457889865
No 135
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.58 E-value=6.7e-08 Score=85.14 Aligned_cols=111 Identities=10% Similarity=-0.015 Sum_probs=78.0
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCCh-hhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEcc
Q 014834 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s-~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
++|+|||+ |+||..++++|++. |++|+..+.... .. -.|... ..+++|+....|++++++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~------G~~v~~vnp~~~g~~-----i~G~~~----~~sl~el~~~~Dlvii~v 78 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQ------GYHVIPVSPKVAGKT-----LLGQQG----YATLADVPEKVDMVDVFR 78 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHH------TCCEEEECSSSTTSE-----ETTEEC----CSSTTTCSSCCSEEECCS
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHC------CCEEEEeCCcccccc-----cCCeec----cCCHHHcCCCCCEEEEEe
Confidence 89999999 89999999999999 998655444320 11 147764 567888888999999999
Q ss_pred CCchHHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchh
Q 014834 187 SDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~ 243 (417)
|+....++++++.. ...+.+|++.+.+.-...+. .-..+ +-.+.||+++-.
T Consensus 79 p~~~v~~v~~~~~~-~g~~~i~i~~~~~~~~l~~~---a~~~G--i~~igpnc~g~~ 129 (145)
T 2duw_A 79 NSEAAWGVAQEAIA-IGAKTLWLQLGVINEQAAVL---AREAG--LSVVMDRCPAIE 129 (145)
T ss_dssp CSTHHHHHHHHHHH-HTCCEEECCTTCCCHHHHHH---HHTTT--CEEECSCCHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEEcCChHHHHHHHH---HHHcC--CEEEcCCeeeEE
Confidence 99999999988765 44556666665553211111 11223 344569998866
No 136
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.56 E-value=1e-07 Score=98.47 Aligned_cols=91 Identities=16% Similarity=0.192 Sum_probs=72.2
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
..+.| ++|+|||+|.+|.++|+.|+.. |.+|++.++. ......+...|+. ..+++|++++||+|+++
T Consensus 207 ~~L~G-ktVgIiG~G~IG~~vA~~Lka~------Ga~Viv~D~~-p~~a~~A~~~G~~-----~~sL~eal~~ADVVilt 273 (436)
T 3h9u_A 207 VMIAG-KTACVCGYGDVGKGCAAALRGF------GARVVVTEVD-PINALQAAMEGYQ-----VLLVEDVVEEAHIFVTT 273 (436)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred CcccC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCC-hhhhHHHHHhCCe-----ecCHHHHHhhCCEEEEC
Confidence 56788 9999999999999999999998 9998877664 3334556678887 46899999999999987
Q ss_pred cCCchHHHHHH-HHHhcCCCCcEEEEec
Q 014834 186 ISDAAQADNYE-KIFSCMKPNSILGLSH 212 (417)
Q Consensus 186 vpd~~~~~Vl~-eI~~~lk~gaiLi~a~ 212 (417)
...... +. +.+..||+|++|+.++
T Consensus 274 ~gt~~i---I~~e~l~~MK~gAIVINvg 298 (436)
T 3h9u_A 274 TGNDDI---ITSEHFPRMRDDAIVCNIG 298 (436)
T ss_dssp SSCSCS---BCTTTGGGCCTTEEEEECS
T ss_pred CCCcCc---cCHHHHhhcCCCcEEEEeC
Confidence 654332 32 5677899999988554
No 137
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.55 E-value=4.9e-08 Score=92.99 Aligned_cols=90 Identities=19% Similarity=0.138 Sum_probs=69.0
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEcc
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
.++| +|+|||+|.||.+++.+|.+. |.+|.+++|+.++..+.+.+.|.. ..+.+++ +++|+|++++
T Consensus 114 ~l~~--~v~iiG~G~~g~~~a~~l~~~------g~~v~v~~r~~~~~~~l~~~~~~~-----~~~~~~~-~~~Divi~~t 179 (263)
T 2d5c_A 114 PLKG--PALVLGAGGAGRAVAFALREA------GLEVWVWNRTPQRALALAEEFGLR-----AVPLEKA-REARLLVNAT 179 (263)
T ss_dssp CCCS--CEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHHTCE-----ECCGGGG-GGCSEEEECS
T ss_pred CCCC--eEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHhccc-----hhhHhhc-cCCCEEEEcc
Confidence 3566 899999999999999999998 888888888755555666666654 3467788 9999999999
Q ss_pred CCchHH---HHHHHHHhcCCCCcEEEEec
Q 014834 187 SDAAQA---DNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 187 pd~~~~---~Vl~eI~~~lk~gaiLi~a~ 212 (417)
|+..+. .++. .+.+++|++|++..
T Consensus 180 p~~~~~~~~~~l~--~~~l~~g~~viD~~ 206 (263)
T 2d5c_A 180 RVGLEDPSASPLP--AELFPEEGAAVDLV 206 (263)
T ss_dssp STTTTCTTCCSSC--GGGSCSSSEEEESC
T ss_pred CCCCCCCCCCCCC--HHHcCCCCEEEEee
Confidence 988653 2222 45688898887543
No 138
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.52 E-value=3.6e-06 Score=92.16 Aligned_cols=212 Identities=12% Similarity=0.080 Sum_probs=134.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH-----------cC----ceec-CC-CcCC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AG----FTEE-NG-TLGD 171 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~-----------~G----~~~~-~~-~~~s 171 (417)
+-++||||||.|.||..||..+... |++|++.+...+ ..+.+.+ .+ .... .. ...+
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~a------G~~V~l~D~~~~-~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 386 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARV------GISVVAVESDPK-QLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSS 386 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSHH-HHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEES
T ss_pred ccccEEEEEcccHHHHHHHHHHHhC------CCchhcccchHh-hhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccC
Confidence 3458999999999999999999999 999988776532 2222111 00 0000 00 0122
Q ss_pred HHhhcCcCCEEEEccCCchH--HHHHHHHHhcCCCCcEEE-EecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHH
Q 014834 172 IYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd~~~--~~Vl~eI~~~lk~gaiLi-~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly 248 (417)
..+.+++||+||=+++-... .++|.+|-++++|++||. -++++++..+.+ .....-+|+..|+=-|.+.
T Consensus 387 ~~~~l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~---~~~~p~r~ig~HFfnP~~~----- 458 (742)
T 3zwc_A 387 STKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS---STDRPQLVIGTHFFSPAHV----- 458 (742)
T ss_dssp CGGGGGSCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEECCSSTTT-----
T ss_pred cHHHHhhCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHh---hcCCccccccccccCCCCC-----
Confidence 23457899999999997665 369999999999999875 778888877765 2223347999999888877
Q ss_pred hhcccccCCCceEE-EeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHHH-HHHHHHHHHHH
Q 014834 249 VQGKEINGAGINSS-FAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHG-IVESLFRRFTE 326 (417)
Q Consensus 249 ~~G~~~~G~Gv~~l-iav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~pA-~iea~~d~~v~ 326 (417)
|+.+ +.++...+.+.++.+.++...+|...++- .+ ..+-+.+-+.. ++..+. .+++
T Consensus 459 ----------m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV~v----kd-------~pGFi~NRi~~~~~~ea~-~l~~ 516 (742)
T 3zwc_A 459 ----------MRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVV----GN-------CYGFVGNRMLAPYYNQGF-FLLE 516 (742)
T ss_dssp ----------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEC----CC-------STTTTHHHHHHHHHHHHH-HHHH
T ss_pred ----------CceEEEecCCCCCHHHHHHHHHHHHHhCCCCccc----CC-------CCCccHHHHhhHHHHHHH-HHHH
Confidence 3331 34477788899999999999999753221 11 11223332222 333332 3566
Q ss_pred cCCCHHHHHHHHHHHHH--HHHHHHHHHhcHHHH
Q 014834 327 NGMSEDLAYKNTVECIT--GIISKIISTQGMLAV 358 (417)
Q Consensus 327 ~Gl~~e~A~~~~~q~~~--~g~~~li~e~G~~~l 358 (417)
.|.++++--.... .+- -|--.|+-..|++.+
T Consensus 517 eG~~~~~id~a~~-~~G~pmGPf~l~D~vGlDv~ 549 (742)
T 3zwc_A 517 EGSKPEDVDGVLE-EFGFKMGPFRVSDLAGLDVG 549 (742)
T ss_dssp TTCCHHHHHHHHH-HHTCSSCHHHHHHHHCHHHH
T ss_pred cCCCHHHHHHHHH-HcCCCCChHHHHHHhCHHHH
Confidence 7888766544321 110 144455556677443
No 139
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.46 E-value=5.1e-07 Score=88.13 Aligned_cols=95 Identities=15% Similarity=0.119 Sum_probs=65.3
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCC--cEEEEEecCChhhHHHHHHcC---------ceecCCCcCCHHhhcCcC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARAAG---------FTEENGTLGDIYETISGS 179 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G--~~ViVg~r~~s~s~~~A~~~G---------~~~~~~~~~s~~Ea~~~A 179 (417)
|+||+|||.|+||.++|..|... | .+|.+.++..++....+.+.+ +.. ...+. +++++|
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~------g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~d~-~~~~~a 70 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ------GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNI---VINDW-AALADA 70 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEE---EESCG-GGGTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEE---EeCCH-HHhCCC
Confidence 57999999999999999999998 8 588877776444333333221 121 02456 788999
Q ss_pred CEEEEccCCchH--------------------HHHHHHHHhcCCCCcE-EEEecCchh
Q 014834 180 DLVLLLISDAAQ--------------------ADNYEKIFSCMKPNSI-LGLSHGFLL 216 (417)
Q Consensus 180 DIViLavpd~~~--------------------~~Vl~eI~~~lk~gai-Li~a~G~~i 216 (417)
|+||+++|+... .++++++.++. |+.+ |+++-+..+
T Consensus 71 DvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 71 DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDV 127 (309)
T ss_dssp SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHH
T ss_pred CEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHHH
Confidence 999999997653 46666777765 4554 445555543
No 140
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.44 E-value=4.7e-07 Score=93.80 Aligned_cols=94 Identities=24% Similarity=0.247 Sum_probs=73.6
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
..+.| |+|+|||+|.+|..+|+.++.. |.+|++.++.. .....+...|+. +.+++|++++||+|+++
T Consensus 243 ~~L~G-KTVgVIG~G~IGr~vA~~lraf------Ga~Viv~d~dp-~~a~~A~~~G~~-----vv~LeElL~~ADIVv~a 309 (464)
T 3n58_A 243 VMMAG-KVAVVCGYGDVGKGSAQSLAGA------GARVKVTEVDP-ICALQAAMDGFE-----VVTLDDAASTADIVVTT 309 (464)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH-HHHHHHHHTTCE-----ECCHHHHGGGCSEEEEC
T ss_pred CcccC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEeCCc-chhhHHHhcCce-----eccHHHHHhhCCEEEEC
Confidence 56889 9999999999999999999988 99998876643 333456667887 45899999999999998
Q ss_pred cCCchHHHHH-HHHHhcCCCCcEEEEecCch
Q 014834 186 ISDAAQADNY-EKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 186 vpd~~~~~Vl-~eI~~~lk~gaiLi~a~G~~ 215 (417)
+... .++ .+.+..||+|++|+.++-+.
T Consensus 310 tgt~---~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 310 TGNK---DVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp CSSS---SSBCHHHHHHSCTTEEEEECSSST
T ss_pred CCCc---cccCHHHHhcCCCCeEEEEcCCCC
Confidence 7542 234 35667899999998665443
No 141
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=98.41 E-value=1.2e-05 Score=78.69 Aligned_cols=176 Identities=16% Similarity=0.226 Sum_probs=128.4
Q ss_pred HcCceecCCCcCCHHhhcCcCCEEEEccCCch-HHHHHHHHHhcCCCCcEEEEecCchh---hhhhhcccCCCCCccEEE
Q 014834 159 AAGFTEENGTLGDIYETISGSDLVLLLISDAA-QADNYEKIFSCMKPNSILGLSHGFLL---GHLQSIGLDFPKNIGVIA 234 (417)
Q Consensus 159 ~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~-~~~Vl~eI~~~lk~gaiLi~a~G~~i---~~~~~~~i~~~~dv~VI~ 234 (417)
+.|+.+ +.|-.|+++++|++|+=+|-.. +.+++++|.++++.|++|..+.-++. .++-+ .+. ++|+.|..
T Consensus 126 daGVkV----tsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTCTipp~~ly~~le-~l~-R~DvgIsS 199 (358)
T 2b0j_A 126 DVGLKV----TSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACTIPTTKFAKIFK-DLG-REDLNITS 199 (358)
T ss_dssp GGTCEE----ESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECSSSCHHHHHHHHH-HTT-CTTSEEEE
T ss_pred HcCcEe----ecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecccCCCHHHHHHHHH-HhC-cccCCeec
Confidence 368886 6788899999999999999765 78999999999999999998877642 22211 223 78999999
Q ss_pred eccCCCchhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCceeccchhhhhhhhccccchhhhchHH
Q 014834 235 VCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVH 314 (417)
Q Consensus 235 v~Pntpg~~vr~ly~~G~~~~G~Gv~~liav~~dvsgea~e~a~~L~~alG~~~~iettf~~e~~~dl~ge~t~L~G~~p 314 (417)
.||-+ .+.. . |-.. +. ..-+++++.+....|++..|+. ++ ..+-++.+.++-.+-.+.
T Consensus 200 ~HPaa-VPgt-----~-------Gq~~-~g-~~yAtEEqIeklveLaksa~k~-ay------~vPAdl~SpV~DMgs~vT 257 (358)
T 2b0j_A 200 YHPGC-VPEM-----K-------GQVY-IA-EGYASEEAVNKLYEIGKIARGK-AF------KMPANLIGPVCDMCSAVT 257 (358)
T ss_dssp CBCSS-CTTT-----C-------CCEE-EE-ESSSCHHHHHHHHHHHHHHHSC-EE------EEEHHHHHHHHSTTHHHH
T ss_pred cCCCC-CCCC-----C-------Cccc-cc-cccCCHHHHHHHHHHHHHhCCC-eE------ecchhhccchhhhHHHHH
Confidence 99933 2221 1 2222 33 5678999999999999999986 11 123344544443444444
Q ss_pred HH----HHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhccc
Q 014834 315 GI----VESLFRRFT-ENGMSEDLAYKNTVECITGIISKIISTQGMLAVYNSFS 363 (417)
Q Consensus 315 A~----iea~~d~~v-~~Gl~~e~A~~~~~q~~~~g~~~li~e~G~~~l~~~vs 363 (417)
|. +-..++... -.|-|.+++-+.+.++|. -++.|+.++|+..|-+.+.
T Consensus 258 Av~~AGiL~Y~~~vtkIlgAP~~mie~q~~esL~-tiasLve~~GI~gm~k~Ln 310 (358)
T 2b0j_A 258 ATVYAGLLAYRDAVTKILGAPADFAQMMADEALT-QIHNLMKEKGIANMEEALD 310 (358)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHH-HHHHHHHHHCGGGHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHhcC
Confidence 43 333444443 469999999999999999 9999999999999987775
No 142
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.39 E-value=3.6e-07 Score=94.21 Aligned_cols=91 Identities=23% Similarity=0.267 Sum_probs=71.0
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
..+.| ++|+|||+|.+|.++|+.|+.. |.+|++.+++. .....|...|+. +.+++|+++++|+|+++
T Consensus 216 ~~L~G-ktV~ViG~G~IGk~vA~~Lra~------Ga~Viv~D~dp-~ra~~A~~~G~~-----v~~Leeal~~ADIVi~a 282 (435)
T 3gvp_A 216 MMFGG-KQVVVCGYGEVGKGCCAALKAM------GSIVYVTEIDP-ICALQACMDGFR-----LVKLNEVIRQVDIVITC 282 (435)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHHTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred ceecC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCCh-hhhHHHHHcCCE-----eccHHHHHhcCCEEEEC
Confidence 46788 9999999999999999999998 99988776653 334456678876 46899999999999997
Q ss_pred cCCchHHHHHH-HHHhcCCCCcEEEEec
Q 014834 186 ISDAAQADNYE-KIFSCMKPNSILGLSH 212 (417)
Q Consensus 186 vpd~~~~~Vl~-eI~~~lk~gaiLi~a~ 212 (417)
+-. ..++. +.+..||+|.+|+.++
T Consensus 283 tgt---~~lI~~e~l~~MK~gailINvg 307 (435)
T 3gvp_A 283 TGN---KNVVTREHLDRMKNSCIVCNMG 307 (435)
T ss_dssp SSC---SCSBCHHHHHHSCTTEEEEECS
T ss_pred CCC---cccCCHHHHHhcCCCcEEEEec
Confidence 321 22443 5667899999888554
No 143
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.36 E-value=1.4e-06 Score=85.63 Aligned_cols=80 Identities=16% Similarity=0.165 Sum_probs=62.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
.||||||+|+||..++.+|++. .+++++ +.++..++..+.+.+.|... ..+.+++++ +.|+|++++|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAAN-----PDLELVVIADPFIEGAQRLAEANGAEA----VASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHTTTCEE----ESSHHHHTTCSCCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHcCCce----eCCHHHHhcCCCCCEEEEeCCc
Confidence 6899999999999999999875 156665 44555444455667778664 678999998 89999999999
Q ss_pred chHHHHHHHHHh
Q 014834 189 AAQADNYEKIFS 200 (417)
Q Consensus 189 ~~~~~Vl~eI~~ 200 (417)
..+.++......
T Consensus 76 ~~h~~~~~~al~ 87 (344)
T 3euw_A 76 STHVDLITRAVE 87 (344)
T ss_dssp GGHHHHHHHHHH
T ss_pred hhhHHHHHHHHH
Confidence 999887766543
No 144
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.36 E-value=8.7e-07 Score=92.86 Aligned_cols=92 Identities=22% Similarity=0.321 Sum_probs=73.5
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEcc
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
.+.| ++|+|||+|.+|..+|+.++.. |.+|++.++. ....+.+.+.|+. +.+.+++++++|+|++++
T Consensus 271 ~l~G-ktV~IiG~G~IG~~~A~~lka~------Ga~Viv~d~~-~~~~~~A~~~Ga~-----~~~l~e~l~~aDvVi~at 337 (494)
T 3ce6_A 271 LIGG-KKVLICGYGDVGKGCAEAMKGQ------GARVSVTEID-PINALQAMMEGFD-----VVTVEEAIGDADIVVTAT 337 (494)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHGGGCSEEEECS
T ss_pred CCCc-CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCE-----EecHHHHHhCCCEEEECC
Confidence 5788 9999999999999999999998 9988776655 3445677888986 357889999999999999
Q ss_pred CCchHHHHHH-HHHhcCCCCcEEEEecCc
Q 014834 187 SDAAQADNYE-KIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 187 pd~~~~~Vl~-eI~~~lk~gaiLi~a~G~ 214 (417)
+.... +. +..+.|++|.+|+..+-+
T Consensus 338 gt~~~---i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 338 GNKDI---IMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp SSSCS---BCHHHHHHSCTTCEEEECSSS
T ss_pred CCHHH---HHHHHHHhcCCCcEEEEeCCC
Confidence 86542 33 566779999998866543
No 145
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.35 E-value=3.7e-07 Score=91.52 Aligned_cols=96 Identities=19% Similarity=0.165 Sum_probs=69.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc----CceecCCCcCCHHhhcCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~----G~~~~~~~~~s~~Ea~~~ADIViLavp 187 (417)
++|+|||+|.||.+++++|.... ...+|.+++|+.++..+.+.+. |+.. ..+.+.+++++++|+|+++||
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~----~~~~V~V~~r~~~~a~~la~~~~~~~g~~~--~~~~~~~eav~~aDiVi~aTp 203 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHL----GIEEIVAYDTDPLATAKLIANLKEYSGLTI--RRASSVAEAVKGVDIITTVTA 203 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHS----CCCEEEEECSSHHHHHHHHHHHTTCTTCEE--EECSSHHHHHTTCSEEEECCC
T ss_pred CeEEEECCcHHHHHHHHHHHHhC----CCcEEEEEcCCHHHHHHHHHHHHhccCceE--EEeCCHHHHHhcCCEEEEecc
Confidence 89999999999999999986530 0347888888766666666554 5321 015688999999999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecCch
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G~~ 215 (417)
......++. ...+++|+.|+..+.+.
T Consensus 204 s~~~~pvl~--~~~l~~G~~V~~vgs~~ 229 (350)
T 1x7d_A 204 DKAYATIIT--PDMLEPGMHLNAVGGDC 229 (350)
T ss_dssp CSSEEEEEC--GGGCCTTCEEEECSCCB
T ss_pred CCCCCceec--HHHcCCCCEEEECCCCC
Confidence 864222332 25688999888776654
No 146
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.33 E-value=1.1e-06 Score=85.14 Aligned_cols=80 Identities=14% Similarity=0.099 Sum_probs=62.9
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc
Q 014834 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~ 189 (417)
.||||||+|.||.. ++.+|++. .+++++ +.++..++..+.+.+.|+.. ..+.++++++.|+|++++|+.
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~~~~~----~~~~~~ll~~~D~V~i~tp~~ 77 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKS-----ERFEFVGAFTPNKVKREKICSDYRIMP----FDSIESLAKKCDCIFLHSSTE 77 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSC-----SSSEEEEEECSCHHHHHHHHHHHTCCB----CSCHHHHHTTCSEEEECCCGG
T ss_pred CcEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHHhcCCEEEEeCCcH
Confidence 68999999999996 89888874 156665 55555455556677778764 678999999999999999999
Q ss_pred hHHHHHHHHHh
Q 014834 190 AQADNYEKIFS 200 (417)
Q Consensus 190 ~~~~Vl~eI~~ 200 (417)
.+.++......
T Consensus 78 ~h~~~~~~al~ 88 (308)
T 3uuw_A 78 THYEIIKILLN 88 (308)
T ss_dssp GHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 99888766443
No 147
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.30 E-value=1.8e-06 Score=80.82 Aligned_cols=78 Identities=23% Similarity=0.242 Sum_probs=58.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEE-EEEecCChhhHHHHHHcCceecCCCcCCHHhhc-CcCCEEEEccCCc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVV-KVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~V-iVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~-~~ADIViLavpd~ 189 (417)
+||||||+|.||..++++|.+. |+++ .++++. .+. .+ . +.++++++ .++|+|++++|+.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~------g~~lv~v~d~~-~~~----~~---~-----~~~~~~l~~~~~DvVv~~~~~~ 61 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN------GFEIAAILDVR-GEH----EK---M-----VRGIDEFLQREMDVAVEAASQQ 61 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEECSS-CCC----TT---E-----ESSHHHHTTSCCSEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHhcC------CCEEEEEEecC-cch----hh---h-----cCCHHHHhcCCCCEEEECCCHH
Confidence 4899999999999999999977 8887 455554 221 11 2 56889988 6999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEEe
Q 014834 190 AQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 190 ~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
.+.+++... ++.|+.|++.
T Consensus 62 ~~~~~~~~~---l~~G~~vv~~ 80 (236)
T 2dc1_A 62 AVKDYAEKI---LKAGIDLIVL 80 (236)
T ss_dssp HHHHHHHHH---HHTTCEEEES
T ss_pred HHHHHHHHH---HHCCCcEEEE
Confidence 888777543 4567765543
No 148
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.30 E-value=1.8e-06 Score=85.23 Aligned_cols=80 Identities=11% Similarity=0.114 Sum_probs=62.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
.||||||+|+||..++.+|++. ..+++++ +.++..++..+.+.+.|+.. ..+.+|+++ +.|+|++++|+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp~ 85 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKH----ADRAELIDVCDIDPAALKAAVERTGARG----HASLTDMLAQTDADIVILTTPS 85 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHT----TTTEEEEEEECSSHHHHHHHHHHHCCEE----ESCHHHHHHHCCCSEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhC----CCCeEEEEEEcCCHHHHHHHHHHcCCce----eCCHHHHhcCCCCCEEEECCCc
Confidence 6899999999999999999874 0156655 45555445556667778865 678999986 79999999999
Q ss_pred chHHHHHHHHH
Q 014834 189 AAQADNYEKIF 199 (417)
Q Consensus 189 ~~~~~Vl~eI~ 199 (417)
..+.++.....
T Consensus 86 ~~h~~~~~~al 96 (354)
T 3q2i_A 86 GLHPTQSIECS 96 (354)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988776543
No 149
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.30 E-value=1.8e-06 Score=84.26 Aligned_cols=79 Identities=22% Similarity=0.222 Sum_probs=61.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
.||||||+|+||..++.+|++. .+++++ +.++..++..+.+.+.|+. ..+.+++++ +.|+|++++|+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~D~V~i~tp~ 73 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGN-----ADARLVAVADAFPAAAEAIAGAYGCE-----VRTIDAIEAAADIDAVVICTPT 73 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHHTTCE-----ECCHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHhhC-----CCcEEEEEECCCHHHHHHHHHHhCCC-----cCCHHHHhcCCCCCEEEEeCCc
Confidence 6899999999999999999874 156665 4555544545666777775 468999887 89999999999
Q ss_pred chHHHHHHHHHh
Q 014834 189 AAQADNYEKIFS 200 (417)
Q Consensus 189 ~~~~~Vl~eI~~ 200 (417)
..+.++......
T Consensus 74 ~~h~~~~~~al~ 85 (331)
T 4hkt_A 74 DTHADLIERFAR 85 (331)
T ss_dssp GGHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 999887766443
No 150
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.29 E-value=2.1e-06 Score=84.20 Aligned_cols=81 Identities=15% Similarity=0.184 Sum_probs=62.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
.||||||+|.||..++.+|++. .+++++ +.+++.++..+.+.+.|+.. ...+.++++. +.|+|++++|+
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 77 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRES-----AQAEVRGIASRRLENAQKMAKELAIPV---AYGSYEELCKDETIDIIYIPTYN 77 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHS-----SSEEEEEEBCSSSHHHHHHHHHTTCCC---CBSSHHHHHHCTTCSEEEECCCG
T ss_pred EEEEEECchHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHHHcCCCc---eeCCHHHHhcCCCCCEEEEcCCC
Confidence 5899999999999999999884 156665 44555555566677778731 2678999987 79999999999
Q ss_pred chHHHHHHHHHh
Q 014834 189 AAQADNYEKIFS 200 (417)
Q Consensus 189 ~~~~~Vl~eI~~ 200 (417)
..+.++......
T Consensus 78 ~~h~~~~~~al~ 89 (330)
T 3e9m_A 78 QGHYSAAKLALS 89 (330)
T ss_dssp GGHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999887765443
No 151
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=98.29 E-value=9.7e-07 Score=87.00 Aligned_cols=119 Identities=13% Similarity=0.146 Sum_probs=84.7
Q ss_pred CEEEEE-cc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccC
Q 014834 112 NQIGVI-GW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (417)
Q Consensus 112 kkIgII-G~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavp 187 (417)
++|+|| |+ |++|..++++|++. |++++...++.... .+-.|+.. ..+++|+.+ ..|++++++|
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~------G~~~v~~VnP~~~g---~~i~G~~v----y~sl~el~~~~~vD~avI~vP 80 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEY------GTNLVGGTTPGKGG---KTHLGLPV----FNTVKEAKEQTGATASVIYVP 80 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHHCCCEEEECCC
T ss_pred CcEEEEECCCCCHHHHHHHHHHHC------CCcEEEEeCCCcCc---ceECCeee----echHHHhhhcCCCCEEEEecC
Confidence 889999 99 99999999999999 99855444442111 01257775 568999888 8999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCc-cEEEeccCCCchhHH
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNI-GVIAVCPKGMGPSVR 245 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv-~VI~v~Pntpg~~vr 245 (417)
+..+.++++++... .-..+|++++|+......+ .....++. .+..+.||+||....
T Consensus 81 ~~~~~~~~~e~i~~-Gi~~iv~~t~G~~~~~~~~-l~~~a~~~~gi~liGPnc~Gii~p 137 (305)
T 2fp4_A 81 PPFAAAAINEAIDA-EVPLVVCITEGIPQQDMVR-VKHRLLRQGKTRLIGPNCPGVINP 137 (305)
T ss_dssp HHHHHHHHHHHHHT-TCSEEEECCCCCCHHHHHH-HHHHHTTCSSCEEECSSSCEEEET
T ss_pred HHHHHHHHHHHHHC-CCCEEEEECCCCChHHHHH-HHHHHHhcCCcEEEeCCCCeEecc
Confidence 99999999875542 2244788999997643111 11223334 556688999988743
No 152
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.26 E-value=7.3e-06 Score=69.87 Aligned_cols=95 Identities=16% Similarity=0.054 Sum_probs=63.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHh---h-cCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE---T-ISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~E---a-~~~ADIViLavp 187 (417)
++|.|+|+|.+|.++++.|.+. |++|++.+++ +...+.+.+.|+....+...+.+. + +.++|+||+++|
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~------g~~V~~id~~-~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA------GKKVLAVDKS-KEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESC-HHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 7999999999999999999999 9998877765 444556666676432222333322 2 568999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
+......+-.....+....++..+..
T Consensus 80 ~~~~n~~~~~~a~~~~~~~iia~~~~ 105 (141)
T 3llv_A 80 DDEFNLKILKALRSVSDVYAIVRVSS 105 (141)
T ss_dssp CHHHHHHHHHHHHHHCCCCEEEEESC
T ss_pred CHHHHHHHHHHHHHhCCceEEEEEcC
Confidence 76554433333333334445554443
No 153
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.26 E-value=1.8e-06 Score=84.99 Aligned_cols=79 Identities=25% Similarity=0.273 Sum_probs=60.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCce-ecCCCcCCHHhhcC--cCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFT-EENGTLGDIYETIS--GSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~-~~~~~~~s~~Ea~~--~ADIViLavp 187 (417)
.||||||+|+||..++.+|++. .+++++ +.++..++..+.+.+.|+. . ..+.+++++ +.|+|++++|
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp 73 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMI-----DDAILYAISDVREDRLREMKEKLGVEKA----YKDPHELIEDPNVDAVLVCSS 73 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGS-----TTEEEEEEECSCHHHHHHHHHHHTCSEE----ESSHHHHHHCTTCCEEEECSC
T ss_pred eEEEEEcCCHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHhCCCce----eCCHHHHhcCCCCCEEEEcCC
Confidence 6899999999999999999874 156655 4455544545666777763 3 678999887 8999999999
Q ss_pred CchHHHHHHHHH
Q 014834 188 DAAQADNYEKIF 199 (417)
Q Consensus 188 d~~~~~Vl~eI~ 199 (417)
+..+.++.....
T Consensus 74 ~~~h~~~~~~al 85 (344)
T 3ezy_A 74 TNTHSELVIACA 85 (344)
T ss_dssp GGGHHHHHHHHH
T ss_pred CcchHHHHHHHH
Confidence 999988776543
No 154
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=98.26 E-value=9e-07 Score=86.34 Aligned_cols=117 Identities=15% Similarity=0.205 Sum_probs=79.8
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
.||+|||+ |.||..++++|++. |++++....+. +.- .+..|+.. ..+++|+.+ ..|++++++|+
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~------g~~~V~~V~p~-~~g--~~~~G~~v----y~sl~el~~~~~~D~viI~tP~ 74 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAY------GTKMVGGVTPG-KGG--TTHLGLPV----FNTVREAVAATGATASVIYVPA 74 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTT-CTT--CEETTEEE----ESSHHHHHHHHCCCEEEECCCG
T ss_pred CEEEEECCCChHHHHHHHHHHHC------CCeEEEEeCCC-ccc--ceeCCeec----cCCHHHHhhcCCCCEEEEecCH
Confidence 78999999 99999999999998 88854444332 110 01357665 578999887 89999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchh
Q 014834 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~ 243 (417)
..+.+++.+.... ....+|+++.|++.....+ .....+...+..+.||++|..
T Consensus 75 ~~~~~~~~ea~~~-Gi~~iVi~t~G~~~~~~~~-l~~~A~~~gv~liGPNc~Gi~ 127 (288)
T 2nu8_A 75 PFCKDSILEAIDA-GIKLIITITEGIPTLDMLT-VKVKLDEAGVRMIGPNTPGVI 127 (288)
T ss_dssp GGHHHHHHHHHHT-TCSEEEECCCCCCHHHHHH-HHHHHHHHTCEEECSSCCEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEecCCccee
Confidence 9999999876543 1233566889997643211 111112234445778887665
No 155
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.25 E-value=2.5e-06 Score=83.87 Aligned_cols=79 Identities=19% Similarity=0.125 Sum_probs=60.6
Q ss_pred CEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEE-EEecCChhhHHHHHHcC--ceecCCCcCCHHhhcCc--CCEEEEc
Q 014834 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVK-VGLRKGSRSFAEARAAG--FTEENGTLGDIYETISG--SDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr-~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G--~~~~~~~~~s~~Ea~~~--ADIViLa 185 (417)
.||||||+|.||..++.+|+ .. .+++++ +.++..++..+.+.+.| ... ..+.+|++++ .|+|+++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~-----~~~~l~av~d~~~~~~~~~~~~~g~~~~~----~~~~~~ll~~~~~D~V~i~ 73 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKL-----SGAEIVAVTDVNQEAAQKVVEQYQLNATV----YPNDDSLLADENVDAVLVT 73 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTC-----SSEEEEEEECSSHHHHHHHHHHTTCCCEE----ESSHHHHHHCTTCCEEEEC
T ss_pred EEEEEECccHHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCCee----eCCHHHHhcCCCCCEEEEC
Confidence 58999999999999999998 42 156655 44555455556677778 343 6789999876 8999999
Q ss_pred cCCchHHHHHHHHH
Q 014834 186 ISDAAQADNYEKIF 199 (417)
Q Consensus 186 vpd~~~~~Vl~eI~ 199 (417)
+|+..+.++.....
T Consensus 74 tp~~~h~~~~~~al 87 (344)
T 3mz0_A 74 SWGPAHESSVLKAI 87 (344)
T ss_dssp SCGGGHHHHHHHHH
T ss_pred CCchhHHHHHHHHH
Confidence 99999988776543
No 156
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.24 E-value=1.4e-06 Score=88.67 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=71.2
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecC---------CC----------
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---------GT---------- 168 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~---------~~---------- 168 (417)
+.+ .||+|||+|.+|...++.++.. |.+|++++++.. ..+.+.+.|....+ +.
T Consensus 182 v~~-~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~-~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~ 253 (381)
T 3p2y_A 182 VKP-ASALVLGVGVAGLQALATAKRL------GAKTTGYDVRPE-VAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERA 253 (381)
T ss_dssp ECC-CEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSGG-GHHHHHHTTCEECCCC-------------CHHHHH
T ss_pred cCC-CEEEEECchHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHcCCeEEeccccccccccchhhhhHHHHh
Confidence 466 8999999999999999999998 999988877654 45666667764210 00
Q ss_pred --cCCHHhhcCcCCEEEEcc--CCchHHHHH-HHHHhcCCCCcEEEEec
Q 014834 169 --LGDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 169 --~~s~~Ea~~~ADIViLav--pd~~~~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
..+++++++++|+||.++ |......++ ++....||||++|++.+
T Consensus 254 ~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 254 QQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred hhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 114568899999999885 433333333 46778899999999776
No 157
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.23 E-value=3.9e-06 Score=73.22 Aligned_cols=101 Identities=15% Similarity=0.076 Sum_probs=64.9
Q ss_pred hhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHH-HcCceecCCCcCCH---Hhh-cCcC
Q 014834 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEENGTLGDI---YET-ISGS 179 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~-~~G~~~~~~~~~s~---~Ea-~~~A 179 (417)
++...+ ++|.|||+|.+|..+++.|+.. |++|++.+++.++ .+.+. ..|.....+...+. .++ +.++
T Consensus 14 ~~~~~~-~~v~IiG~G~iG~~la~~L~~~------g~~V~vid~~~~~-~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 14 SKKQKS-KYIVIFGCGRLGSLIANLASSS------GHSVVVVDKNEYA-FHRLNSEFSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp ---CCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCGGG-GGGSCTTCCSEEEESCTTSHHHHHTTTGGGC
T ss_pred hcccCC-CcEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHH-HHHHHhcCCCcEEEecCCCHHHHHHcCcccC
Confidence 466777 9999999999999999999998 9998887776443 33333 45643211112222 233 6789
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCCc-EEEEecC
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPNS-ILGLSHG 213 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~ga-iLi~a~G 213 (417)
|+||+++++......+..+...+.+.. ++..+.+
T Consensus 86 d~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 86 DMVFAFTNDDSTNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp SEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 999999998776655555555443433 4444444
No 158
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.23 E-value=1.3e-06 Score=85.22 Aligned_cols=117 Identities=15% Similarity=0.193 Sum_probs=81.3
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
+||+|+|+ |+||..++++|++. |++++....+.... .+-.|+.. ..+++|+.+ .+|++++++|+
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~------g~~~v~~VnP~~~g---~~i~G~~v----y~sl~el~~~~~~Dv~Ii~vp~ 74 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTY------GTKIVAGVTPGKGG---MEVLGVPV----YDTVKEAVAHHEVDASIIFVPA 74 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHSCCSEEEECCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHHc------CCeEEEEECCCCCC---ceECCEEe----eCCHHHHhhcCCCCEEEEecCH
Confidence 78999999 99999999999998 99855444432110 01357765 568999888 89999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchh
Q 014834 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~ 243 (417)
..+.+++++.... .-..+|+++.||+.....+ .....++..+..+.||++|..
T Consensus 75 ~~~~~~~~ea~~~-Gi~~vVi~t~G~~~~~~~~-l~~~a~~~gi~vigPNc~Gii 127 (288)
T 1oi7_A 75 PAAADAALEAAHA-GIPLIVLITEGIPTLDMVR-AVEEIKALGSRLIGGNCPGII 127 (288)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECCSCCCHHHHHH-HHHHHHHHTCEEEESSSCEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEeCCCCeEE
Confidence 9999999876543 2234677899997543211 111122334556678888765
No 159
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.21 E-value=3e-06 Score=82.52 Aligned_cols=85 Identities=15% Similarity=0.105 Sum_probs=62.1
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCc-eecCCCcCCHHhhc-CcCCEEEEccC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGF-TEENGTLGDIYETI-SGSDLVLLLIS 187 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~-~~~~~~~~s~~Ea~-~~ADIViLavp 187 (417)
|.||||||+|.||..++.+|++. .+++++ +.+++.++..+.+.+.|. .. ..+.++++ .+.|+|++++|
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-----~~~~~~~v~d~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~D~V~i~tp 71 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-----GEYQLVAIYSRKLETAATFASRYQNIQL----FDQLEVFFKSSFDLVYIASP 71 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TSEEEEEEECSSHHHHHHHGGGSSSCEE----ESCHHHHHTSSCSEEEECSC
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-----CCeEEEEEEeCCHHHHHHHHHHcCCCeE----eCCHHHHhCCCCCEEEEeCC
Confidence 46899999999999999999875 145554 445544444455556675 32 56899998 78999999999
Q ss_pred CchHHHHHHHHHhcCCCCcE
Q 014834 188 DAAQADNYEKIFSCMKPNSI 207 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gai 207 (417)
+..+.++..... +.|+-
T Consensus 72 ~~~h~~~~~~al---~~gk~ 88 (325)
T 2ho3_A 72 NSLHFAQAKAAL---SAGKH 88 (325)
T ss_dssp GGGHHHHHHHHH---HTTCE
T ss_pred hHHHHHHHHHHH---HcCCc
Confidence 999988776543 34553
No 160
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.20 E-value=1.7e-06 Score=87.24 Aligned_cols=99 Identities=16% Similarity=0.101 Sum_probs=68.9
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH-cCcee--cCCCcCCHHhhcCcCCEE
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTE--ENGTLGDIYETISGSDLV 182 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~-~G~~~--~~~~~~s~~Ea~~~ADIV 182 (417)
..+.| ++|+|||+|.+|.++++.++.. |.+|++.+++..+ .+.+.+ .|... ......++++.++++|+|
T Consensus 164 ~~l~g-~~V~ViG~G~iG~~~a~~a~~~------Ga~V~~~d~~~~~-l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvV 235 (377)
T 2vhw_A 164 PGVEP-ADVVVIGAGTAGYNAARIANGM------GATVTVLDINIDK-LRQLDAEFCGRIHTRYSSAYELEGAVKRADLV 235 (377)
T ss_dssp TTBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHHHHTTTSSEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCHHH-HHHHHHhcCCeeEeccCCHHHHHHHHcCCCEE
Confidence 46889 9999999999999999999988 9998877776433 344444 45431 000012466788899999
Q ss_pred EEccCCch--HHHH-HHHHHhcCCCCcEEEEec
Q 014834 183 LLLISDAA--QADN-YEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 183 iLavpd~~--~~~V-l~eI~~~lk~gaiLi~a~ 212 (417)
|.+++... ...+ .++..+.|++|.+|++.+
T Consensus 236 i~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 236 IGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp EECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred EECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 99875221 1122 345667899999888665
No 161
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.19 E-value=9.8e-06 Score=69.68 Aligned_cols=75 Identities=21% Similarity=0.268 Sum_probs=55.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHH---h-hcCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---E-TISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~---E-a~~~ADIViLavp 187 (417)
++|.|||+|.+|..+++.|++. |++|++.+++ ....+.+++.|+....+...+.+ + -+.++|+||+++|
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~~-~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS------DIPLVVIETS-RTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEESC-HHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 5899999999999999999999 9998877765 44466666778754222222322 2 2578999999999
Q ss_pred CchHHH
Q 014834 188 DAAQAD 193 (417)
Q Consensus 188 d~~~~~ 193 (417)
+.....
T Consensus 81 ~~~~n~ 86 (140)
T 3fwz_A 81 NGYEAG 86 (140)
T ss_dssp CHHHHH
T ss_pred ChHHHH
Confidence 877654
No 162
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.18 E-value=4.5e-06 Score=81.16 Aligned_cols=86 Identities=15% Similarity=0.160 Sum_probs=63.1
Q ss_pred CEEEEEcccchHHHH-HHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQ-AQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~Ai-A~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavp 187 (417)
.||||||+|.||..+ +..|.+. +++++ +.+++.++..+.+.+.|+.. ...+.+++++ +.|+|++++|
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~------~~~~vav~d~~~~~~~~~~~~~g~~~---~~~~~~~~l~~~~~D~V~i~tp 71 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT------GGEVVSMMSTSAERGAAYATENGIGK---SVTSVEELVGDPDVDAVYVSTT 71 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT------TCEEEEEECSCHHHHHHHHHHTTCSC---CBSCHHHHHTCTTCCEEEECSC
T ss_pred CeEEEEcccHHHHHhhhHHhhcC------CCeEEEEECCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 379999999999998 8888775 77765 45555444455667777641 1568899886 5999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEE
Q 014834 188 DAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi 209 (417)
+..+.++..... +.|+-|+
T Consensus 72 ~~~h~~~~~~al---~~Gk~v~ 90 (332)
T 2glx_A 72 NELHREQTLAAI---RAGKHVL 90 (332)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred hhHhHHHHHHHH---HCCCeEE
Confidence 999988776543 3566433
No 163
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.17 E-value=4.8e-06 Score=81.92 Aligned_cols=93 Identities=22% Similarity=0.277 Sum_probs=61.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHH--cC------ceecCCCcCCHHhhcCcCCE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~--~G------~~~~~~~~~s~~Ea~~~ADI 181 (417)
+||+|||+|+||.+++..|... |+ +|++.++..++....+.. .+ .... ..+ .+++++||+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~------g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~---~~d-~~~~~~aDv 70 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK------GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY---AGD-YADLKGSDV 70 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE---ECC-GGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE---eCC-HHHhCCCCE
Confidence 5899999999999999999998 88 888777654332222221 11 1110 234 467899999
Q ss_pred EEEccCCch----------------HHHHHHHHHhcCCCCcEE-EEecCch
Q 014834 182 VLLLISDAA----------------QADNYEKIFSCMKPNSIL-GLSHGFL 215 (417)
Q Consensus 182 ViLavpd~~----------------~~~Vl~eI~~~lk~gaiL-i~a~G~~ 215 (417)
||+++|... ..++++.|.++. |+.+| +++-+..
T Consensus 71 Viiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 71 VIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVD 120 (319)
T ss_dssp EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHH
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHH
Confidence 999999643 245666676664 55554 4444554
No 164
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.17 E-value=7.5e-06 Score=71.79 Aligned_cols=115 Identities=10% Similarity=0.035 Sum_probs=77.2
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccC
Q 014834 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavp 187 (417)
++|+|||+ |++|..++++|++. |++|+ ..+... ..-.|... ..+++|+....|++++++|
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~------G~~v~--~Vnp~~----~~i~G~~~----y~sl~~l~~~vDlvvi~vp 86 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEH------GYDVY--PVNPKY----EEVLGRKC----YPSVLDIPDKIEVVDLFVK 86 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT------TCEEE--EECTTC----SEETTEEC----BSSGGGCSSCCSEEEECSC
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHC------CCEEE--EECCCC----CeECCeec----cCCHHHcCCCCCEEEEEeC
Confidence 89999999 79999999999999 99743 332221 11146664 5688998889999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHH
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly 248 (417)
+..+.++++++...- .+. +++..|+.-..+.+ ..-..++++ +.||+++-...+++
T Consensus 87 ~~~~~~vv~~~~~~g-i~~-i~~~~g~~~~~l~~--~a~~~Gi~v--vGpnc~gv~~~~~~ 141 (144)
T 2d59_A 87 PKLTMEYVEQAIKKG-AKV-VWFQYNTYNREASK--KADEAGLII--VANRCMMREHERLL 141 (144)
T ss_dssp HHHHHHHHHHHHHHT-CSE-EEECTTCCCHHHHH--HHHHTTCEE--EESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CCE-EEECCCchHHHHHH--HHHHcCCEE--EcCCchhhcchhhc
Confidence 999999998766532 223 44556653211111 011134454 56999998766554
No 165
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.17 E-value=3.5e-06 Score=83.16 Aligned_cols=79 Identities=11% Similarity=0.132 Sum_probs=61.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhc--CcCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETI--SGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~--~~ADIViLavpd 188 (417)
.||||||+|.||..++.+|++. .+++++ ++++..++..+.+.+.|+.. ..+.+|++ .+.|+|++++|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~~l~~~~~D~V~i~tp~ 76 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKS-----EKLKLVTCYSRTEDKREKFGKRYNCAG----DATMEALLAREDVEMVIITVPN 76 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEECSSHHHHHHHHHHHTCCC----CSSHHHHHHCSSCCEEEECSCT
T ss_pred ceEEEEccCHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHhcCCCCCEEEEeCCh
Confidence 4899999999999999999875 156654 44555445555667778764 67899998 679999999999
Q ss_pred chHHHHHHHHH
Q 014834 189 AAQADNYEKIF 199 (417)
Q Consensus 189 ~~~~~Vl~eI~ 199 (417)
..+.++.....
T Consensus 77 ~~h~~~~~~al 87 (354)
T 3db2_A 77 DKHAEVIEQCA 87 (354)
T ss_dssp TSHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988776543
No 166
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.17 E-value=2e-06 Score=84.89 Aligned_cols=92 Identities=15% Similarity=0.179 Sum_probs=67.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH----cCceecCCCcCCHHhhcCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~----~G~~~~~~~~~s~~Ea~~~ADIViLavp 187 (417)
++|+|||+|.||.++++.|+... ...+|.+++|+ +..+.+.+ .|+... .+ +.++++++||+|++|||
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~----~~~~V~v~~r~--~a~~la~~l~~~~g~~~~--~~-~~~eav~~aDIVi~aT~ 192 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARF----ALEAILVHDPY--ASPEILERIGRRCGVPAR--MA-APADIAAQADIVVTATR 192 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS----CCCEEEEECTT--CCHHHHHHHHHHHTSCEE--EC-CHHHHHHHCSEEEECCC
T ss_pred cEEEEECccHHHHHHHHHHHHhC----CCcEEEEECCc--HHHHHHHHHHHhcCCeEE--Ee-CHHHHHhhCCEEEEccC
Confidence 89999999999999999998740 12378888887 44455443 465321 14 89999999999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecCchh
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHGFLL 216 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G~~i 216 (417)
... .++. .+.++||++|+..+.+..
T Consensus 193 s~~--pvl~--~~~l~~G~~V~~vGs~~p 217 (313)
T 3hdj_A 193 STT--PLFA--GQALRAGAFVGAIGSSLP 217 (313)
T ss_dssp CSS--CSSC--GGGCCTTCEEEECCCSST
T ss_pred CCC--cccC--HHHcCCCcEEEECCCCCC
Confidence 752 2332 356899999888777644
No 167
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.16 E-value=8.2e-06 Score=68.52 Aligned_cols=99 Identities=12% Similarity=0.083 Sum_probs=60.9
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHH---hh-cCcCCEEE
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ET-ISGSDLVL 183 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~---Ea-~~~ADIVi 183 (417)
+++ ++|.|+|+|.+|..+++.|.+. |++|++.++.. ...+.+.+.|.....+...+.+ ++ +.++|+|+
T Consensus 4 ~~~-~~v~I~G~G~iG~~~a~~l~~~------g~~v~~~d~~~-~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 4 IKN-KQFAVIGLGRFGGSIVKELHRM------GHEVLAVDINE-EKVNAYASYATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp --C-CSEEEECCSHHHHHHHHHHHHT------TCCCEEEESCH-HHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CcC-CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 455 8899999999999999999998 98887776653 3333333445432111122322 33 67899999
Q ss_pred EccCCc-hHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 184 LLISDA-AQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 184 Lavpd~-~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+++++. .....+......+.+..++..+.+-
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 107 (144)
T 2hmt_A 76 VAIGANIQASTLTTLLLKELDIPNIWVKAQNY 107 (144)
T ss_dssp ECCCSCHHHHHHHHHHHHHTTCSEEEEECCSH
T ss_pred ECCCCchHHHHHHHHHHHHcCCCeEEEEeCCH
Confidence 999975 3322333334445555555555543
No 168
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.14 E-value=8.2e-06 Score=79.77 Aligned_cols=86 Identities=12% Similarity=0.119 Sum_probs=62.1
Q ss_pred CEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEE-EEecCChhhHHHHHHcCc-eecCCCcCCHHhhcC--cCCEEEEcc
Q 014834 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVK-VGLRKGSRSFAEARAAGF-TEENGTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr-~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~-~~~~~~~~s~~Ea~~--~ADIViLav 186 (417)
.||||||+|.||..++..|+ .. .+++++ +.++..++..+.+.+.|+ .. ..+.+++++ +.|+|++++
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~-----~~~~~vav~d~~~~~~~~~a~~~g~~~~----~~~~~~~l~~~~~D~V~i~t 79 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKI-----QGVKLVAACALDSNQLEWAKNELGVETT----YTNYKDMIDTENIDAIFIVA 79 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTC-----SSEEEEEEECSCHHHHHHHHHTTCCSEE----ESCHHHHHTTSCCSEEEECS
T ss_pred ceEEEEcCCHHHHHHHHHHHhcC-----CCcEEEEEecCCHHHHHHHHHHhCCCcc----cCCHHHHhcCCCCCEEEEeC
Confidence 68999999999999999998 43 156654 445544444455666777 33 568899886 699999999
Q ss_pred CCchHHHHHHHHHhcCCCCcEEE
Q 014834 187 SDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~gaiLi 209 (417)
|+..+.++..... +.|+.|+
T Consensus 80 p~~~h~~~~~~al---~~G~~v~ 99 (346)
T 3cea_A 80 PTPFHPEMTIYAM---NAGLNVF 99 (346)
T ss_dssp CGGGHHHHHHHHH---HTTCEEE
T ss_pred ChHhHHHHHHHHH---HCCCEEE
Confidence 9999988776543 3566443
No 169
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.12 E-value=2.9e-06 Score=86.88 Aligned_cols=97 Identities=19% Similarity=0.168 Sum_probs=71.0
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecC-------------CCc-----
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-------------GTL----- 169 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~-------------~~~----- 169 (417)
+.+ .||+|||+|.+|..+++.++.. |.+|++++++..+ .+.+.+.|..... +..
T Consensus 188 v~~-~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~~-l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~ 259 (405)
T 4dio_A 188 VPA-AKIFVMGAGVAGLQAIATARRL------GAVVSATDVRPAA-KEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSG 259 (405)
T ss_dssp ECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSTTH-HHHHHHTTCEECCCCC-----------------C
T ss_pred cCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEcCCHHH-HHHHHHcCCceeecccccccccccccchhhhcch
Confidence 456 8999999999999999999988 9999888776544 5566667754200 001
Q ss_pred -------CCHHhhcCcCCEEEEcc--CCchHHHHH-HHHHhcCCCCcEEEEec
Q 014834 170 -------GDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 170 -------~s~~Ea~~~ADIViLav--pd~~~~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
.++++++++||+||.++ |......++ ++....||||++|++.+
T Consensus 260 ~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 260 EYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 14678899999999885 543333333 46788899999999776
No 170
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.12 E-value=1.8e-05 Score=70.39 Aligned_cols=93 Identities=15% Similarity=0.094 Sum_probs=60.8
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC---HHhh--cCcCC
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET--ISGSD 180 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s---~~Ea--~~~AD 180 (417)
..+.+ ++|.|||+|.||..+++.|++.. |++|++.+++. ...+.+.+.|+....+...+ +.++ +.++|
T Consensus 35 ~~~~~-~~v~IiG~G~~G~~~a~~L~~~~-----g~~V~vid~~~-~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad 107 (183)
T 3c85_A 35 INPGH-AQVLILGMGRIGTGAYDELRARY-----GKISLGIEIRE-EAAQQHRSEGRNVISGDATDPDFWERILDTGHVK 107 (183)
T ss_dssp BCCTT-CSEEEECCSHHHHHHHHHHHHHH-----CSCEEEEESCH-HHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCC
T ss_pred cCCCC-CcEEEECCCHHHHHHHHHHHhcc-----CCeEEEEECCH-HHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCC
Confidence 34567 89999999999999999998630 67887777654 44555666776431111223 2344 77899
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCC
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPN 205 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~g 205 (417)
+||+++|+......+-.....+.++
T Consensus 108 ~vi~~~~~~~~~~~~~~~~~~~~~~ 132 (183)
T 3c85_A 108 LVLLAMPHHQGNQTALEQLQRRNYK 132 (183)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCChHHHHHHHHHHHHHCCC
Confidence 9999999866543332333334433
No 171
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.11 E-value=8.4e-06 Score=79.16 Aligned_cols=84 Identities=15% Similarity=0.167 Sum_probs=62.1
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc
Q 014834 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~ 189 (417)
.||||||+|.||.. ++..|.+. .+++++ +.++..++..+.+.+.|+.. ..+.+++..+.|+|++++|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~l~~~~D~V~i~tp~~ 76 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAA-----SDWTLQGAWSPTRAKALPICESWRIPY----ADSLSSLAASCDAVFVHSSTA 76 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSC-----SSEEEEEEECSSCTTHHHHHHHHTCCB----CSSHHHHHTTCSEEEECSCTT
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCc----cCcHHHhhcCCCEEEEeCCch
Confidence 58999999999996 88888763 156665 55666555556677778653 567777767899999999999
Q ss_pred hHHHHHHHHHhcCCCCcE
Q 014834 190 AQADNYEKIFSCMKPNSI 207 (417)
Q Consensus 190 ~~~~Vl~eI~~~lk~gai 207 (417)
.+.++..... +.|+-
T Consensus 77 ~h~~~~~~al---~~G~~ 91 (319)
T 1tlt_A 77 SHFDVVSTLL---NAGVH 91 (319)
T ss_dssp HHHHHHHHHH---HTTCE
T ss_pred hHHHHHHHHH---HcCCe
Confidence 9988776543 34653
No 172
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.09 E-value=6.2e-06 Score=80.67 Aligned_cols=86 Identities=12% Similarity=0.108 Sum_probs=61.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
.||||||+|+||..++.+|+.. .+.+++ +++++.++..+.+.+.|+.. ...+.+|++. +.|+|++++|+
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~-----~~~~~~av~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 77 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLA-----GNGEVVAVSSRTLESAQAFANKYHLPK---AYDKLEDMLADESIDVIYVATIN 77 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHH-----CSEEEEEEECSCSSTTCC---CCCCSC---EESCHHHHHTCTTCCEEEECSCG
T ss_pred eEEEEEechHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEECCCc
Confidence 5899999999999999999876 134544 45555555556666777641 1678999988 79999999999
Q ss_pred chHHHHHHHHHhcCCCCcEE
Q 014834 189 AAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiL 208 (417)
..+.++..... +.|+-|
T Consensus 78 ~~h~~~~~~al---~aGk~V 94 (329)
T 3evn_A 78 QDHYKVAKAAL---LAGKHV 94 (329)
T ss_dssp GGHHHHHHHHH---HTTCEE
T ss_pred HHHHHHHHHHH---HCCCeE
Confidence 99988776543 345533
No 173
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.09 E-value=7.7e-06 Score=81.19 Aligned_cols=79 Identities=22% Similarity=0.255 Sum_probs=61.1
Q ss_pred CEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEE-EEecCChhhHHHHHHcC--ceecCCCcCCHHhhcC--cCCEEEEc
Q 014834 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVK-VGLRKGSRSFAEARAAG--FTEENGTLGDIYETIS--GSDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr-~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G--~~~~~~~~~s~~Ea~~--~ADIViLa 185 (417)
.||||||+|.||..++.+|+ .. .+++++ +.++..++..+.+++.| ... ..+.+|+++ +.|+|+++
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~-----~~~~lvav~d~~~~~~~~~a~~~g~~~~~----~~~~~~ll~~~~~D~V~i~ 94 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTV-----SGVEVVAVCDIVAGRAQAALDKYAIEAKD----YNDYHDLINDKDVEVVIIT 94 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTC-----TTEEEEEEECSSTTHHHHHHHHHTCCCEE----ESSHHHHHHCTTCCEEEEC
T ss_pred eeEEEECCcHHHHHHHHHHHhhC-----CCcEEEEEEeCCHHHHHHHHHHhCCCCee----eCCHHHHhcCCCCCEEEEc
Confidence 58999999999999999998 42 156655 45665556566777778 343 678999887 58999999
Q ss_pred cCCchHHHHHHHHH
Q 014834 186 ISDAAQADNYEKIF 199 (417)
Q Consensus 186 vpd~~~~~Vl~eI~ 199 (417)
+|+..+.++.....
T Consensus 95 tp~~~h~~~~~~al 108 (357)
T 3ec7_A 95 ASNEAHADVAVAAL 108 (357)
T ss_dssp SCGGGHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 99999988776543
No 174
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.08 E-value=8.6e-06 Score=80.64 Aligned_cols=80 Identities=15% Similarity=0.136 Sum_probs=62.4
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccC
Q 014834 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavp 187 (417)
.||||||+|.||. .++.+|++. .+++++ |.++..++..+.+.+.|+.. ..+.+|+++ +.|+|++++|
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~~ll~~~~~D~V~i~tp 98 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAE-----PLTEVTAIASRRWDRAKRFTERFGGEP----VEGYPALLERDDVDAVYVPLP 98 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHC-----TTEEEEEEEESSHHHHHHHHHHHCSEE----EESHHHHHTCTTCSEEEECCC
T ss_pred eEEEEEcCcHHHHHHHHHHHHhC-----CCeEEEEEEcCCHHHHHHHHHHcCCCC----cCCHHHHhcCCCCCEEEECCC
Confidence 6899999999998 799999875 155654 55665555566777788875 578999986 5899999999
Q ss_pred CchHHHHHHHHHh
Q 014834 188 DAAQADNYEKIFS 200 (417)
Q Consensus 188 d~~~~~Vl~eI~~ 200 (417)
+..+.++......
T Consensus 99 ~~~h~~~~~~al~ 111 (350)
T 3rc1_A 99 AVLHAEWIDRALR 111 (350)
T ss_dssp GGGHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9999888765443
No 175
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.07 E-value=1.3e-05 Score=79.70 Aligned_cols=85 Identities=12% Similarity=0.155 Sum_probs=63.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCCc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd~ 189 (417)
.||||||+|.||..++.+|++. .+++++...+.+....+.+.+.|+.. ..+.+++++ +.|+|++++|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~a~~~g~~~----~~~~~~ll~~~~~D~V~i~tp~~ 76 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAA-----DNLEVHGVFDILAEKREAAAQKGLKI----YESYEAVLADEKVDAVLIATPND 76 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-----TTEEEEEEECSSHHHHHHHHTTTCCB----CSCHHHHHHCTTCCEEEECSCGG
T ss_pred CcEEEECcCHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHhcCCce----eCCHHHHhcCCCCCEEEEcCCcH
Confidence 4799999999999999999875 15566533344344455677778764 678999987 789999999999
Q ss_pred hHHHHHHHHHhcCCCCcEE
Q 014834 190 AQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 190 ~~~~Vl~eI~~~lk~gaiL 208 (417)
.+.++...... .|+-|
T Consensus 77 ~h~~~~~~al~---aGkhV 92 (359)
T 3e18_A 77 SHKELAISALE---AGKHV 92 (359)
T ss_dssp GHHHHHHHHHH---TTCEE
T ss_pred HHHHHHHHHHH---CCCCE
Confidence 99887765433 45533
No 176
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.07 E-value=7.9e-06 Score=79.61 Aligned_cols=79 Identities=19% Similarity=0.142 Sum_probs=57.6
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhc-CcCCEEEEccCCc
Q 014834 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~-~~ADIViLavpd~ 189 (417)
.||||||+|+||. .++.+|+.. .+.++++.++..++..+.+.+.|+.. ...+..+++ .+.|+|++++|+.
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~-----~~~~l~v~d~~~~~~~~~a~~~g~~~---~~~~~~~~l~~~~D~V~i~tp~~ 74 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQW-----PDIELVLCTRNPKVLGTLATRYRVSA---TCTDYRDVLQYGVDAVMIHAATD 74 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTS-----TTEEEEEECSCHHHHHHHHHHTTCCC---CCSSTTGGGGGCCSEEEECSCGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhC-----CCceEEEEeCCHHHHHHHHHHcCCCc---cccCHHHHhhcCCCEEEEECCch
Confidence 5899999999998 599998764 15676666665555556677777641 023444555 6899999999999
Q ss_pred hHHHHHHHH
Q 014834 190 AQADNYEKI 198 (417)
Q Consensus 190 ~~~~Vl~eI 198 (417)
.+.++..+.
T Consensus 75 ~h~~~~~~a 83 (323)
T 1xea_A 75 VHSTLAAFF 83 (323)
T ss_dssp GHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 998877654
No 177
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.06 E-value=1e-05 Score=78.48 Aligned_cols=98 Identities=18% Similarity=0.165 Sum_probs=62.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHH--HcCceec-CCC--cCCHHhhcCcCCEEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAGFTEE-NGT--LGDIYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~--~~G~~~~-~~~--~~s~~Ea~~~ADIViL 184 (417)
+||+|||.|+||.+++..|... |+ +|.+.++...+....+. ..+.... +.. ..+..++++++|+||+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~------g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii 81 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR------GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVI 81 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEE
Confidence 7999999999999999999998 88 88777665333221122 2232100 000 1112467889999999
Q ss_pred ccCCchH----------------HHHHHHHHhcCCCCcEE-EEecCchh
Q 014834 185 LISDAAQ----------------ADNYEKIFSCMKPNSIL-GLSHGFLL 216 (417)
Q Consensus 185 avpd~~~----------------~~Vl~eI~~~lk~gaiL-i~a~G~~i 216 (417)
+++.... .+++++|.++ .++++| ++.-|+..
T Consensus 82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDI 129 (319)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHH
Confidence 9953322 2566677775 566654 46667754
No 178
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.06 E-value=9.1e-06 Score=71.07 Aligned_cols=117 Identities=14% Similarity=0.091 Sum_probs=76.8
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccC
Q 014834 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavp 187 (417)
++|+|||+ |++|..++++|++. |++| +..+..+..+ .-.|... ..+++|+.+..|++++++|
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~------G~~v--~~vnp~~~~~--~i~G~~~----~~sl~el~~~vDlavi~vp 79 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ------GYRV--LPVNPRFQGE--ELFGEEA----VASLLDLKEPVDILDVFRP 79 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT------TCEE--EEECGGGTTS--EETTEEC----BSSGGGCCSCCSEEEECSC
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHC------CCEE--EEeCCCcccC--cCCCEEe----cCCHHHCCCCCCEEEEEeC
Confidence 89999999 89999999999999 9974 3333221000 1146664 5688998889999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchhHHHHH
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr~ly 248 (417)
+....++++++...- .+.+|+.++.+.-. +.+ ..-..+++++ .||+++-...++.
T Consensus 80 ~~~~~~v~~~~~~~g-i~~i~~~~g~~~~~-~~~--~a~~~Gir~v--gpnc~g~~~~~~~ 134 (140)
T 1iuk_A 80 PSALMDHLPEVLALR-PGLVWLQSGIRHPE-FEK--ALKEAGIPVV--ADRCLMVEHKRLF 134 (140)
T ss_dssp HHHHTTTHHHHHHHC-CSCEEECTTCCCHH-HHH--HHHHTTCCEE--ESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CCEEEEcCCcCHHH-HHH--HHHHcCCEEE--cCCccceEChhhc
Confidence 988889998765532 23455544444321 111 0101345554 6999988755443
No 179
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.06 E-value=1.3e-05 Score=78.38 Aligned_cols=91 Identities=22% Similarity=0.200 Sum_probs=61.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHH-------c--C--ceecCCCcCCHHhhcCcC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------A--G--FTEENGTLGDIYETISGS 179 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~-------~--G--~~~~~~~~~s~~Ea~~~A 179 (417)
+||+|||+|+||.++|..|... |+ +|++.++..++....+.+ . . +.. ..+. +++++|
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~------g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~----t~d~-~a~~~a 73 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD------NLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG----TDDY-ADISGS 73 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE----ESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE----CCCH-HHhCCC
Confidence 7999999999999999999998 88 888777764432221111 0 1 221 2456 788999
Q ss_pred CEEEEccC--------------Cc--hHHHHHHHHHhcCCCCcEEE-EecCc
Q 014834 180 DLVLLLIS--------------DA--AQADNYEKIFSCMKPNSILG-LSHGF 214 (417)
Q Consensus 180 DIViLavp--------------d~--~~~~Vl~eI~~~lk~gaiLi-~a~G~ 214 (417)
|+||++++ .. ...+++++|.++. |+++|+ .+...
T Consensus 74 DiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~ 124 (317)
T 2ewd_A 74 DVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPL 124 (317)
T ss_dssp SEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSH
T ss_pred CEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChH
Confidence 99999993 21 1346777777774 566654 44443
No 180
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.06 E-value=1.8e-05 Score=72.60 Aligned_cols=96 Identities=13% Similarity=0.078 Sum_probs=64.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC---HHhh-cCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET-ISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s---~~Ea-~~~ADIViLavp 187 (417)
|||.|||+|.+|..+++.|.+. |++|++.+++.++..+.+...|+....+...+ +.++ ++++|+|+++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~------g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR------KYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT------TCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 5799999999999999999999 99988877764443344555565432222223 2333 789999999999
Q ss_pred CchHHHHHHHHHhc-CCCCcEEEEecC
Q 014834 188 DAAQADNYEKIFSC-MKPNSILGLSHG 213 (417)
Q Consensus 188 d~~~~~Vl~eI~~~-lk~gaiLi~a~G 213 (417)
+.....++..+... .....++..+..
T Consensus 75 ~d~~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 75 RDEVNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEECCCS
T ss_pred CcHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 98776665555544 333345554433
No 181
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.05 E-value=2.6e-05 Score=63.26 Aligned_cols=92 Identities=16% Similarity=0.048 Sum_probs=62.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCChhhHHHHHHcCceecCCCcC---CHHhhcCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLG---DIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~---s~~Ea~~~ADIViLavp 187 (417)
++|.|||.|.||.++++.|.+. | ++|++.+|+.++ .+.....|+........ +..++++++|+||.++|
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~------g~~~v~~~~r~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS------SNYSVTVADHDLAA-LAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC------SSEEEEEEESCHHH-HHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCHHH-HHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence 8999999999999999999998 8 788877776433 34444455432111122 24567889999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
......+++.... .|.-.++..+
T Consensus 79 ~~~~~~~~~~~~~---~g~~~~~~~~ 101 (118)
T 3ic5_A 79 FFLTPIIAKAAKA---AGAHYFDLTE 101 (118)
T ss_dssp GGGHHHHHHHHHH---TTCEEECCCS
T ss_pred chhhHHHHHHHHH---hCCCEEEecC
Confidence 8777666655433 3544444333
No 182
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.04 E-value=1.3e-05 Score=76.65 Aligned_cols=151 Identities=12% Similarity=0.080 Sum_probs=91.6
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
|+||+|+|+|.||..+++.+.+. +.+++...+.... ...|+.. +.+++++. ++|+||-.+.|..
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~------~~eLva~~d~~~~-----~~~gv~v----~~dl~~l~-~~DVvIDft~p~a 66 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK------GHEIVGVIENTPK-----ATTPYQQ----YQHIADVK-GADVAIDFSNPNL 66 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEECSSCC-------CCSCB----CSCTTTCT-TCSEEEECSCHHH
T ss_pred ceEEEEECcCHHHHHHHHHHHhC------CCEEEEEEecCcc-----ccCCCce----eCCHHHHh-CCCEEEEeCChHH
Confidence 58999999999999999999887 5554433443222 1467765 56788888 9999997777766
Q ss_pred HHHHHHHHHhcCCCCc-EEEEecCchhhhhhhcccCCCCCccEEEeccCCCchhHH--HHHhhcccccC-CCceEEEeec
Q 014834 191 QADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVR--RLYVQGKEING-AGINSSFAVH 266 (417)
Q Consensus 191 ~~~Vl~eI~~~lk~ga-iLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr--~ly~~G~~~~G-~Gv~~liav~ 266 (417)
..+.++ ++.|. +|+-..|++-..++. .....+.+.+ ...||.+--+.- .+-+.--...+ .-+-. +-.|
T Consensus 67 ~~~~~~-----l~~g~~vVigTTG~s~e~~~~-l~~aa~~~~v-~~a~N~S~Gv~l~~~~~~~aa~~l~~~dieI-~E~H 138 (243)
T 3qy9_A 67 LFPLLD-----EDFHLPLVVATTGEKEKLLNK-LDELSQNMPV-FFSANMSYGVHALTKILAAAVPLLDDFDIEL-TEAH 138 (243)
T ss_dssp HHHHHT-----SCCCCCEEECCCSSHHHHHHH-HHHHTTTSEE-EECSSCCHHHHHHHHHHHHHHHHTTTSEEEE-EEEE
T ss_pred HHHHHH-----HhcCCceEeCCCCCCHHHHHH-HHHHHhcCCE-EEECCccHHHHHHHHHHHHHHHhcCCCCEEE-EEcC
Confidence 655543 56666 555667886533321 1122344454 789998765411 11000000111 12222 2233
Q ss_pred C----C-CCHHHHHHHHHHHHHhCC
Q 014834 267 Q----D-VDGRATNVALGWSVALGS 286 (417)
Q Consensus 267 ~----d-vsgea~e~a~~L~~alG~ 286 (417)
. | +||.|+.++..+ ...|.
T Consensus 139 H~~K~DaPSGTA~~la~~i-~~~~~ 162 (243)
T 3qy9_A 139 HNKKVDAPSGTLEKLYDVI-VSLKE 162 (243)
T ss_dssp CTTCCSSSCHHHHHHHHHH-HHHST
T ss_pred CCCCCCCCCHHHHHHHHHH-HhcCc
Confidence 3 2 689999999999 88774
No 183
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.04 E-value=4.5e-06 Score=82.42 Aligned_cols=93 Identities=13% Similarity=0.006 Sum_probs=66.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC---ceecCCCcCCHHhhcCcCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG---FTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G---~~~~~~~~~s~~Ea~~~ADIViLavpd 188 (417)
++|+|||+|.||.+++++|+.. +...+|.+++|+.++..+.+.+.+ +.. . +.+.++++ ++|+|+++||.
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~----~~~~~V~v~~r~~~~a~~la~~~~~~~~~~--~-~~~~~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRV----FDIGEVKAYDVREKAAKKFVSYCEDRGISA--S-VQPAEEAS-RCDVLVTTTPS 197 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----SCCCEEEEECSSHHHHHHHHHHHHHTTCCE--E-ECCHHHHT-SSSEEEECCCC
T ss_pred CEEEEEcCcHHHHHHHHHHHHh----CCccEEEEECCCHHHHHHHHHHHHhcCceE--E-ECCHHHHh-CCCEEEEeeCC
Confidence 8999999999999999999874 002378888887666656665433 221 1 46788999 99999999997
Q ss_pred chHHHHHHHHHhcCCCCcEEEEecCchh
Q 014834 189 AAQADNYEKIFSCMKPNSILGLSHGFLL 216 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiLi~a~G~~i 216 (417)
.. .++. ...+++|+.|.+.+.+..
T Consensus 198 ~~--pv~~--~~~l~~G~~V~~ig~~~p 221 (322)
T 1omo_A 198 RK--PVVK--AEWVEEGTHINAIGADGP 221 (322)
T ss_dssp SS--CCBC--GGGCCTTCEEEECSCCST
T ss_pred CC--ceec--HHHcCCCeEEEECCCCCC
Confidence 53 2221 256889988877765543
No 184
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.01 E-value=4e-06 Score=81.88 Aligned_cols=76 Identities=16% Similarity=0.160 Sum_probs=59.3
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCc---eecCCCcCCHHhhcCcCCEE
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~---~~~~~~~~s~~Ea~~~ADIV 182 (417)
.++| ++|.|||.|.||.+++..|.+. |. +|+|++|+.++..+.+.+.+. ... ...+..+++.++|+|
T Consensus 138 ~l~~-~~vlVlGaGg~g~aia~~L~~~------G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 138 TLDG-KRILVIGAGGGARGIYFSLLST------AAERIDMANRTVEKAERLVREGDERRSAYF--SLAEAETRLAEYDII 208 (297)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECSSHHHHHHHHHHSCSSSCCEE--CHHHHHHTGGGCSEE
T ss_pred CCCC-CEEEEECcHHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHhhhccCcee--eHHHHHhhhccCCEE
Confidence 3678 9999999999999999999998 98 899999886666667766554 110 012456778899999
Q ss_pred EEccCCchH
Q 014834 183 LLLISDAAQ 191 (417)
Q Consensus 183 iLavpd~~~ 191 (417)
|.++|....
T Consensus 209 In~t~~~~~ 217 (297)
T 2egg_A 209 INTTSVGMH 217 (297)
T ss_dssp EECSCTTCS
T ss_pred EECCCCCCC
Confidence 999997654
No 185
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.01 E-value=1.1e-05 Score=78.99 Aligned_cols=88 Identities=14% Similarity=0.105 Sum_probs=63.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
.||||||+|.||..++.+|+.. .. .+++++ |++++.++..+.+.+.|+.. ...+.+|+++ +.|+|++++|+
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~-~~--~~~~l~av~d~~~~~a~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp~ 76 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTL-PR--SEHQVVAVAARDLSRAKEFAQKHDIPK---AYGSYEELAKDPNVEVAYVGTQH 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-CT--TTEEEEEEECSSHHHHHHHHHHHTCSC---EESSHHHHHHCTTCCEEEECCCG
T ss_pred cEEEEECchHHHHHHHHHHHhC-CC--CCeEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEECCCc
Confidence 5999999999999999999865 00 023443 44555455566777788731 1678999887 69999999999
Q ss_pred chHHHHHHHHHhcCCCCcEE
Q 014834 189 AAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiL 208 (417)
..+.++..+.. +.|+-|
T Consensus 77 ~~H~~~~~~al---~~GkhV 93 (334)
T 3ohs_X 77 PQHKAAVMLCL---AAGKAV 93 (334)
T ss_dssp GGHHHHHHHHH---HTTCEE
T ss_pred HHHHHHHHHHH---hcCCEE
Confidence 99988776543 345533
No 186
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.00 E-value=7.9e-07 Score=85.32 Aligned_cols=92 Identities=15% Similarity=0.033 Sum_probs=63.6
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEcc
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
++| +|+|||.|.||.+++..|.+. |. +|.|.+|+.++..+.+.+.+... ..+..++++++|+||.+|
T Consensus 107 ~~~--~vliiGaGg~a~ai~~~L~~~------G~~~I~v~nR~~~ka~~la~~~~~~~----~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 107 VKE--PVVVVGAGGAARAVIYALLQM------GVKDIWVVNRTIERAKALDFPVKIFS----LDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp CCS--SEEEECCSHHHHHHHHHHHHT------TCCCEEEEESCHHHHHTCCSSCEEEE----GGGHHHHHHTCSEEEECS
T ss_pred CCC--eEEEECcHHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHHcccCC----HHHHHhhhcCCCEEEECC
Confidence 355 899999999999999999998 88 89999987554444333333222 456778889999999999
Q ss_pred CCchHHH--HHHHHHhcCCCCcEEEE-ecC
Q 014834 187 SDAAQAD--NYEKIFSCMKPNSILGL-SHG 213 (417)
Q Consensus 187 pd~~~~~--Vl~eI~~~lk~gaiLi~-a~G 213 (417)
|.....+ .+. .+.++++++|++ +.+
T Consensus 175 p~gm~p~~~~i~--~~~l~~~~~V~Divy~ 202 (253)
T 3u62_A 175 SVGMKGEELPVS--DDSLKNLSLVYDVIYF 202 (253)
T ss_dssp STTTTSCCCSCC--HHHHTTCSEEEECSSS
T ss_pred CCCCCCCCCCCC--HHHhCcCCEEEEeeCC
Confidence 8543221 111 123567887764 344
No 187
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.96 E-value=1e-05 Score=82.44 Aligned_cols=98 Identities=13% Similarity=0.084 Sum_probs=69.0
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCc-----------------
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL----------------- 169 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~----------------- 169 (417)
.+.| ++|+|||+|.+|...++.++.. |.+|++.+++..+ .+.+++.|.....-..
T Consensus 169 ~l~g-~~V~ViGaG~iG~~aa~~a~~~------Ga~V~v~D~~~~~-~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~ 240 (401)
T 1x13_A 169 KVPP-AKVMVIGAGVAGLAAIGAANSL------GAIVRAFDTRPEV-KEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDA 240 (401)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCGGG-HHHHHHTTCEECCC--------CCHHHHHHSHH
T ss_pred CcCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHHH-HHHHHHcCCEEEEecccccccccccchhhccHH
Confidence 4678 9999999999999999999988 9988887776443 4556677765310000
Q ss_pred ------CCHHhhcCcCCEEEEc--cCCchHHHHH-HHHHhcCCCCcEEEEec
Q 014834 170 ------GDIYETISGSDLVLLL--ISDAAQADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 170 ------~s~~Ea~~~ADIViLa--vpd~~~~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
.+++++++++|+||.+ +|......++ ++....|++|.+|++.+
T Consensus 241 ~~~~~~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 241 FIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 0256788899999999 5522222333 35566799999988766
No 188
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.96 E-value=2.3e-05 Score=76.85 Aligned_cols=86 Identities=17% Similarity=0.238 Sum_probs=61.4
Q ss_pred hccCCCEEEEEcccchHHHH-HHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEE
Q 014834 107 AFNGINQIGVIGWGSQGPAQ-AQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLV 182 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~Ai-A~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIV 182 (417)
.++.|.||||||+|.||... +..|++. .+.+|+ |++++.++..+.|++.|+.. ...|.+|+++ +.|+|
T Consensus 19 ~~~~mirigiIG~G~ig~~~~~~~~~~~-----~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~~~~iDaV 90 (350)
T 4had_A 19 YFQSMLRFGIISTAKIGRDNVVPAIQDA-----ENCVVTAIASRDLTRAREMADRFSVPH---AFGSYEEMLASDVIDAV 90 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHC-----SSEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHHCSSCSEE
T ss_pred cccCccEEEEEcChHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCe---eeCCHHHHhcCCCCCEE
Confidence 34567899999999999864 5666654 145654 45555556667788888742 1578999884 57999
Q ss_pred EEccCCchHHHHHHHHHh
Q 014834 183 LLLISDAAQADNYEKIFS 200 (417)
Q Consensus 183 iLavpd~~~~~Vl~eI~~ 200 (417)
++++|+..+.++......
T Consensus 91 ~I~tP~~~H~~~~~~al~ 108 (350)
T 4had_A 91 YIPLPTSQHIEWSIKAAD 108 (350)
T ss_dssp EECSCGGGHHHHHHHHHH
T ss_pred EEeCCCchhHHHHHHHHh
Confidence 999999999887765443
No 189
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.95 E-value=2e-05 Score=80.04 Aligned_cols=74 Identities=23% Similarity=0.321 Sum_probs=59.5
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEcc
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
+.| ++|+|||+|.||.++++.|+.. |. +|++.+|...+..+.+.+.|.... ...+..+++.++|+||.++
T Consensus 165 l~g-~~VlIiGaG~iG~~~a~~l~~~------G~~~V~v~~r~~~ra~~la~~~g~~~~--~~~~l~~~l~~aDvVi~at 235 (404)
T 1gpj_A 165 LHD-KTVLVVGAGEMGKTVAKSLVDR------GVRAVLVANRTYERAVELARDLGGEAV--RFDELVDHLARSDVVVSAT 235 (404)
T ss_dssp CTT-CEEEEESCCHHHHHHHHHHHHH------CCSEEEEECSSHHHHHHHHHHHTCEEC--CGGGHHHHHHTCSEEEECC
T ss_pred ccC-CEEEEEChHHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHcCCcee--cHHhHHHHhcCCCEEEEcc
Confidence 688 9999999999999999999998 98 888888875554567777776531 1235778888999999999
Q ss_pred CCch
Q 014834 187 SDAA 190 (417)
Q Consensus 187 pd~~ 190 (417)
|...
T Consensus 236 ~~~~ 239 (404)
T 1gpj_A 236 AAPH 239 (404)
T ss_dssp SSSS
T ss_pred CCCC
Confidence 8654
No 190
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=97.95 E-value=1.2e-05 Score=84.28 Aligned_cols=88 Identities=10% Similarity=0.212 Sum_probs=71.8
Q ss_pred hchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhcccCchhh---hhhhhhhccChhHHHHHH
Q 014834 310 LGAVHGIVESLFRRFTENGMSEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKK---EFEKAYSASYYPCMEILY 386 (417)
Q Consensus 310 ~G~~pA~iea~~d~~v~~Gl~~e~A~~~~~q~~~~g~~~li~e~G~~~l~~~vss~~~~---~~~~~~~~~~~~~~~~m~ 386 (417)
+|.-.|.+.|.+|.+.+.|+++.+++++++++.++.+.+++.+.|+++|+|+||++.+. .|...|. +- ..+
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~ 467 (525)
T 3fr7_A 394 AGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSLNPFMHARGVAFMVDNCSTTARLGSRKWAPRFD---YI---LTQ 467 (525)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHTHHHHHTHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHH---HH---HHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHhhhHHHHHHHhhhhhhhhhhhHHHHhhccHhhhcccccchHhHH---HH---HHH
Confidence 56667789999999999999999999999999999999999999999999999976542 2333332 22 237
Q ss_pred HHHHhhccChHH-HHHHH
Q 014834 387 ECYEDVAAGSEI-RSVVL 403 (417)
Q Consensus 387 ~~~~~v~~g~~~-~~~~~ 403 (417)
++|..|.+|..+ |+++.
T Consensus 468 ~~~~~~~~~~~~~~~~~~ 485 (525)
T 3fr7_A 468 QAFVTVDKDAPINQDLIS 485 (525)
T ss_dssp THHHHHHTTCCCCHHHHH
T ss_pred HhHHHhhcCCcchHHHHH
Confidence 999999999987 45443
No 191
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.91 E-value=2.8e-05 Score=76.91 Aligned_cols=90 Identities=14% Similarity=0.161 Sum_probs=62.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
.||||||+|.||..++..|... .+++++ +.+++.++..+.+.+.|+........+.+++++ +.|+|++++|+
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~-----~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 81 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLA-----PNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPT 81 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCG
T ss_pred eEEEEECchHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCCh
Confidence 6899999999999999999874 145554 445554455566777774100011568889886 59999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEE
Q 014834 189 AAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiLi 209 (417)
..+.++.... ++.|+-|+
T Consensus 82 ~~h~~~~~~a---l~aGk~V~ 99 (362)
T 1ydw_A 82 SLHVEWAIKA---AEKGKHIL 99 (362)
T ss_dssp GGHHHHHHHH---HTTTCEEE
T ss_pred HHHHHHHHHH---HHCCCeEE
Confidence 9998877654 44566433
No 192
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.91 E-value=1.8e-06 Score=84.00 Aligned_cols=94 Identities=13% Similarity=0.101 Sum_probs=61.5
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
.++| ++|.|||.|.||.+++..|.+. |. +|.+.+|+.++..+.+.+..... ..+..++++++|+||.+
T Consensus 114 ~l~~-k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~~a~~la~~~~~~~----~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 114 GIED-AYILILGAGGASKGIANELYKI------VRPTLTVANRTMSRFNNWSLNINKIN----LSHAESHLDEFDIIINT 182 (277)
T ss_dssp TGGG-CCEEEECCSHHHHHHHHHHHTT------CCSCCEEECSCGGGGTTCCSCCEEEC----HHHHHHTGGGCSEEEEC
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHhccccc----HhhHHHHhcCCCEEEEC
Confidence 4678 9999999999999999999998 98 88899987655443332211111 33566778899999999
Q ss_pred cCCchHHHHHHHH-HhcCCCCcEEEEe
Q 014834 186 ISDAAQADNYEKI-FSCMKPNSILGLS 211 (417)
Q Consensus 186 vpd~~~~~Vl~eI-~~~lk~gaiLi~a 211 (417)
||.....++-..+ ...++++.+|++.
T Consensus 183 Tp~Gm~~~~~~~l~~~~l~~~~~V~D~ 209 (277)
T 3don_A 183 TPAGMNGNTDSVISLNRLASHTLVSDI 209 (277)
T ss_dssp CC-------CCSSCCTTCCSSCEEEES
T ss_pred ccCCCCCCCcCCCCHHHcCCCCEEEEe
Confidence 9976543221001 2346677776644
No 193
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.90 E-value=2.3e-05 Score=79.00 Aligned_cols=98 Identities=13% Similarity=0.097 Sum_probs=69.1
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcC---------------C
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG---------------D 171 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~---------------s 171 (417)
.+.| ++|+|||+|.+|.+.++.++.. |.+|++.+++..+ .+.+++.|.....-... +
T Consensus 169 ~l~g-~~V~ViGaG~iG~~aa~~a~~~------Ga~V~~~d~~~~~-~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s 240 (384)
T 1l7d_A 169 TVPP-ARVLVFGVGVAGLQAIATAKRL------GAVVMATDVRAAT-KEQVESLGGKFITVDDEAMKTAETAGGYAKEMG 240 (384)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCSTT-HHHHHHTTCEECCC-------------------
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHHHcCCeEEeecccccccccccccchhhcC
Confidence 5688 9999999999999999999988 9988877776443 45566677643000000 0
Q ss_pred ----------HHhhcCcCCEEEEcc--CCchHHHHH-HHHHhcCCCCcEEEEec
Q 014834 172 ----------IYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 172 ----------~~Ea~~~ADIViLav--pd~~~~~Vl-~eI~~~lk~gaiLi~a~ 212 (417)
+.+.++++|+||.++ |......++ ++....|++|.+|++.+
T Consensus 241 ~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 241 EEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp ----CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 667888999999998 432222233 45567799999988765
No 194
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.90 E-value=3.1e-05 Score=75.70 Aligned_cols=93 Identities=20% Similarity=0.212 Sum_probs=58.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHHc--Cc------eecCCCcCCHHhhcCcCCE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA--GF------TEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~~--G~------~~~~~~~~s~~Ea~~~ADI 181 (417)
+||+|||.|+||.++|..|... |+ +|.+.+++..+....+.+. +. .. ...+ .+++++||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~------g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i---~~~~-~~a~~~aDv 70 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR------GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRV---WHGG-HSELADAQV 70 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEE---EEEC-GGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEE---EECC-HHHhCCCCE
Confidence 5899999999999999999988 87 8877766543322223321 11 11 0123 467899999
Q ss_pred EEEccCCchH----------------HHHHHHHHhcCCCCcEEEE-ecCch
Q 014834 182 VLLLISDAAQ----------------ADNYEKIFSCMKPNSILGL-SHGFL 215 (417)
Q Consensus 182 ViLavpd~~~----------------~~Vl~eI~~~lk~gaiLi~-a~G~~ 215 (417)
||++++.... .+++++|.++ .|+.+|++ +-+..
T Consensus 71 VIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 71 VILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPVD 120 (304)
T ss_dssp EEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSHH
T ss_pred EEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCchH
Confidence 9999953321 4455566666 57776554 44444
No 195
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.89 E-value=9.9e-06 Score=78.64 Aligned_cols=82 Identities=12% Similarity=0.134 Sum_probs=56.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
.||||||+|+||..++.+|++. .+++++ +.++. ....+...+. +.. ..+.+++++ ++|+|++++|+
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~-----~~~~~v~v~d~~-~~~~~~~~~~-~~~----~~~~~~~l~~~~~D~V~i~tp~ 79 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGL-----PGAALVRLASSN-PDNLALVPPG-CVI----ESDWRSVVSAPEVEAVIIATPP 79 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHC-----TTEEEEEEEESC-HHHHTTCCTT-CEE----ESSTHHHHTCTTCCEEEEESCG
T ss_pred ceEEEECCcHHHHHHHHHHHhC-----CCcEEEEEEeCC-HHHHHHHHhh-Ccc----cCCHHHHhhCCCCCEEEEeCCh
Confidence 5899999999999999999875 145654 44443 2222111111 332 567888885 79999999999
Q ss_pred chHHHHHHHHHhcCCCCcE
Q 014834 189 AAQADNYEKIFSCMKPNSI 207 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gai 207 (417)
..+.++..+.. +.|+-
T Consensus 80 ~~h~~~~~~al---~~Gk~ 95 (315)
T 3c1a_A 80 ATHAEITLAAI---ASGKA 95 (315)
T ss_dssp GGHHHHHHHHH---HTTCE
T ss_pred HHHHHHHHHHH---HCCCc
Confidence 99988776543 34653
No 196
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.87 E-value=3.3e-05 Score=75.83 Aligned_cols=91 Identities=19% Similarity=0.173 Sum_probs=59.6
Q ss_pred hhccCCC--EEEEEcccchHHHHHHHHHhhhhh--hcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--c
Q 014834 106 DAFNGIN--QIGVIGWGSQGPAQAQNLRDSLAE--AKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--G 178 (417)
Q Consensus 106 ~~l~gmk--kIgIIG~G~mG~AiA~~Lr~s~~~--~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ 178 (417)
..+..|| ||||||+|.||..++.+++....- .-.+.+|+ |.+++.++..+.+++.|+.. ...|.+|+++ +
T Consensus 18 ~~~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~~~~ 94 (393)
T 4fb5_A 18 LYFQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEK---ATADWRALIADPE 94 (393)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSE---EESCHHHHHHCTT
T ss_pred ccccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCe---ecCCHHHHhcCCC
Confidence 4566665 799999999999998887653000 00133543 45555566677888888742 1578999885 5
Q ss_pred CCEEEEccCCchHHHHHHHHH
Q 014834 179 SDLVLLLISDAAQADNYEKIF 199 (417)
Q Consensus 179 ADIViLavpd~~~~~Vl~eI~ 199 (417)
.|+|+++||+..+.++....+
T Consensus 95 iDaV~IatP~~~H~~~a~~al 115 (393)
T 4fb5_A 95 VDVVSVTTPNQFHAEMAIAAL 115 (393)
T ss_dssp CCEEEECSCGGGHHHHHHHHH
T ss_pred CcEEEECCChHHHHHHHHHHH
Confidence 799999999999988776543
No 197
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.85 E-value=2.5e-05 Score=78.27 Aligned_cols=80 Identities=13% Similarity=0.138 Sum_probs=61.4
Q ss_pred CEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcCc--CCEEEEccC
Q 014834 112 NQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G-~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~--ADIViLavp 187 (417)
.||||||+| .||..++.+|+.. .+++++ +.++..++..+.+.+.|+.. ..+.+|++++ .|+|++++|
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~ell~~~~vD~V~i~tp 73 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHH-----PDAQIVAACDPNEDVRERFGKEYGIPV----FATLAEMMQHVQMDAVYIASP 73 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHC-----TTEEEEEEECSCHHHHHHHHHHHTCCE----ESSHHHHHHHSCCSEEEECSC
T ss_pred eEEEEEeCCHHHHHHHHHHHHhC-----CCeEEEEEEeCCHHHHHHHHHHcCCCe----ECCHHHHHcCCCCCEEEEcCC
Confidence 589999999 9999999999875 155654 44444445556677778865 6789999874 999999999
Q ss_pred CchHHHHHHHHHh
Q 014834 188 DAAQADNYEKIFS 200 (417)
Q Consensus 188 d~~~~~Vl~eI~~ 200 (417)
+..+.++......
T Consensus 74 ~~~H~~~~~~al~ 86 (387)
T 3moi_A 74 HQFHCEHVVQASE 86 (387)
T ss_dssp GGGHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9999887765443
No 198
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.85 E-value=6.9e-05 Score=73.18 Aligned_cols=85 Identities=12% Similarity=0.051 Sum_probs=63.0
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEE-EEEecCChhhHHHHHHcC-ceecCCCcCCHHhhcC--cCCEEEEcc
Q 014834 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVV-KVGLRKGSRSFAEARAAG-FTEENGTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~V-iVg~r~~s~s~~~A~~~G-~~~~~~~~~s~~Ea~~--~ADIViLav 186 (417)
.||||||+|.+|. .++.+|+.. ++++ .|.++..++..+.+++.+ ... ..+.+++++ +.|+|++++
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~------~~~lvav~d~~~~~~~~~a~~~~~~~~----~~~~~~ll~~~~~D~V~i~t 74 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDA------GAELAGVFESDSDNRAKFTSLFPSVPF----AASAEQLITDASIDLIACAV 74 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHT------TCEEEEEECSCTTSCHHHHHHSTTCCB----CSCHHHHHTCTTCCEEEECS
T ss_pred cEEEEECCChHHHHHhhhhhcCC------CcEEEEEeCCCHHHHHHHHHhcCCCcc----cCCHHHHhhCCCCCEEEEeC
Confidence 5899999999996 688888765 7775 455666566667777774 433 678999886 689999999
Q ss_pred CCchHHHHHHHHHhcCCCCc-EEE
Q 014834 187 SDAAQADNYEKIFSCMKPNS-ILG 209 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~ga-iLi 209 (417)
|+..+.++..... +.|+ +++
T Consensus 75 p~~~h~~~~~~al---~aGkhVl~ 95 (336)
T 2p2s_A 75 IPCDRAELALRTL---DAGKDFFT 95 (336)
T ss_dssp CGGGHHHHHHHHH---HTTCEEEE
T ss_pred ChhhHHHHHHHHH---HCCCcEEE
Confidence 9999988776543 3465 444
No 199
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.81 E-value=0.0001 Score=72.99 Aligned_cols=88 Identities=19% Similarity=0.146 Sum_probs=58.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHH-------c--C--ceecCCCcCCHHhhcCcC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------A--G--FTEENGTLGDIYETISGS 179 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~-------~--G--~~~~~~~~~s~~Ea~~~A 179 (417)
+||+|||.|.||.++|..|... |+ +|.+.+++.++....+.. . . +.. +.+. +++++|
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~------g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~----t~d~-~al~~a 83 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK------DLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG----ENNY-EYLQNS 83 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE----ESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE----CCCH-HHHCCC
Confidence 6999999999999999999998 88 877776654332211111 0 1 221 2466 789999
Q ss_pred CEEEEcc--CC--------------chHHHHHHHHHhcCCCCcEEEEe
Q 014834 180 DLVLLLI--SD--------------AAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 180 DIViLav--pd--------------~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
|+||+++ |. ....+++++|.++. |+.+|+++
T Consensus 84 D~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~ 130 (328)
T 2hjr_A 84 DVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI 130 (328)
T ss_dssp SEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred CEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 9999998 32 11234555666664 67765544
No 200
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.80 E-value=4.6e-05 Score=74.73 Aligned_cols=83 Identities=20% Similarity=0.207 Sum_probs=59.2
Q ss_pred EEEEEcccchHHHHHHHHHhhhhhh---cCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEcc
Q 014834 113 QIGVIGWGSQGPAQAQNLRDSLAEA---KSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 113 kIgIIG~G~mG~AiA~~Lr~s~~~~---~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLav 186 (417)
+|||||+|.||..++.+++.. ++. ..+.+|+ |.+++.++..+.+++.|+.. ...|.+|+++ +.|+|+++|
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~---~~~d~~~ll~~~~iDaV~I~t 83 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSA-PRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWST---TETDWRTLLERDDVQLVDVCT 83 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHH-HHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESCHHHHTTCTTCSEEEECS
T ss_pred cEEEEcCCHHHHHHHHHHHhC-ccccccccCceEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeC
Confidence 689999999999999988764 110 0012443 44555455567777888743 1578999885 479999999
Q ss_pred CCchHHHHHHHHH
Q 014834 187 SDAAQADNYEKIF 199 (417)
Q Consensus 187 pd~~~~~Vl~eI~ 199 (417)
|+..+.++.....
T Consensus 84 P~~~H~~~~~~al 96 (390)
T 4h3v_A 84 PGDSHAEIAIAAL 96 (390)
T ss_dssp CGGGHHHHHHHHH
T ss_pred ChHHHHHHHHHHH
Confidence 9999998776543
No 201
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.80 E-value=4.3e-05 Score=76.82 Aligned_cols=82 Identities=12% Similarity=0.056 Sum_probs=62.0
Q ss_pred CEEEEEcccc---hHHHHHHHHHhhhhhhcCC-cEEEE--EecCChhhHHHHHHcCceecCCCcCCHHhhcCc-------
Q 014834 112 NQIGVIGWGS---QGPAQAQNLRDSLAEAKSD-IVVKV--GLRKGSRSFAEARAAGFTEENGTLGDIYETISG------- 178 (417)
Q Consensus 112 kkIgIIG~G~---mG~AiA~~Lr~s~~~~~~G-~~ViV--g~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~------- 178 (417)
.||||||+|. ||..++..++.. + ++++. .++..++..+.+++.|+.. .....+.+|++++
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~------~~~~lva~v~d~~~~~a~~~a~~~g~~~-~~~~~~~~~ll~~~~~~~~~ 85 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRD------NTFVLVAGAFDIDPIRGSAFGEQLGVDS-ERCYADYLSMFEQEARRADG 85 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGG------GSEEEEEEECCSSHHHHHHHHHHTTCCG-GGBCSSHHHHHHHHTTCTTC
T ss_pred ceEEEEcCCccchhHHHHHHHHhhC------CCeEEEEEEeCCCHHHHHHHHHHhCCCc-ceeeCCHHHHHhcccccCCC
Confidence 5899999999 999999998876 4 56653 3455556667778888841 1126789998865
Q ss_pred CCEEEEccCCchHHHHHHHHHh
Q 014834 179 SDLVLLLISDAAQADNYEKIFS 200 (417)
Q Consensus 179 ADIViLavpd~~~~~Vl~eI~~ 200 (417)
.|+|++++|+..+.++......
T Consensus 86 vD~V~i~tp~~~H~~~~~~al~ 107 (398)
T 3dty_A 86 IQAVSIATPNGTHYSITKAALE 107 (398)
T ss_dssp CSEEEEESCGGGHHHHHHHHHH
T ss_pred CCEEEECCCcHHHHHHHHHHHH
Confidence 8999999999999887765443
No 202
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.79 E-value=2e-05 Score=79.21 Aligned_cols=94 Identities=15% Similarity=0.101 Sum_probs=64.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCC-CcCCHHhhcCcCCEEEEccC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG-TLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~-~~~s~~Ea~~~ADIViLavp 187 (417)
.+ ++|+|||+|.||.+++..|.+. .+|.+++|+.++..+.+.+.+....|- ...+++++++++|+||.++|
T Consensus 15 ~~-~~v~IiGaG~iG~~ia~~L~~~-------~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P 86 (365)
T 2z2v_A 15 RH-MKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALP 86 (365)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCC
T ss_pred CC-CeEEEEcCCHHHHHHHHHHHcC-------CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCC
Confidence 35 8999999999999999999864 478888887555444443332111010 01346788899999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
+..+..+... .++.|+.+++.+.
T Consensus 87 ~~~~~~v~~a---~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 87 GFLGFKSIKA---AIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHHHHH---HHHTTCCEEECCC
T ss_pred hhhhHHHHHH---HHHhCCeEEEccC
Confidence 8877666543 3456777776654
No 203
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.78 E-value=9.5e-06 Score=78.97 Aligned_cols=75 Identities=16% Similarity=0.131 Sum_probs=57.7
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCc---eecCCCcCCHHhhcCcCCEE
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~---~~~~~~~~s~~Ea~~~ADIV 182 (417)
.++| +++.|||.|-+|.+++..|.+. |. +|.|.+|+.++..+.+.+.+- .. ..+.+++.+++|+|
T Consensus 123 ~l~~-k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~~a~~la~~~~~~~~~~----~~~~~~l~~~aDiI 191 (281)
T 3o8q_A 123 LLKG-ATILLIGAGGAARGVLKPLLDQ------QPASITVTNRTFAKAEQLAELVAAYGEVK----AQAFEQLKQSYDVI 191 (281)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHTT------CCSEEEEEESSHHHHHHHHHHHGGGSCEE----EEEGGGCCSCEEEE
T ss_pred CccC-CEEEEECchHHHHHHHHHHHhc------CCCeEEEEECCHHHHHHHHHHhhccCCee----EeeHHHhcCCCCEE
Confidence 4578 9999999999999999999998 96 899999986666666665442 11 23556666899999
Q ss_pred EEccCCchHH
Q 014834 183 LLLISDAAQA 192 (417)
Q Consensus 183 iLavpd~~~~ 192 (417)
|.+||.....
T Consensus 192 InaTp~gm~~ 201 (281)
T 3o8q_A 192 INSTSASLDG 201 (281)
T ss_dssp EECSCCCC--
T ss_pred EEcCcCCCCC
Confidence 9999987653
No 204
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.78 E-value=5.8e-05 Score=78.94 Aligned_cols=92 Identities=20% Similarity=0.203 Sum_probs=71.4
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEcc
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
.|.| |+++|+|+|.+|.++|+.|+.. |.+|++.+++. .....+...|+. +.+.+++++.+|+|+.++
T Consensus 262 ~L~G-KtVvVtGaGgIG~aiA~~Laa~------GA~Viv~D~~~-~~a~~Aa~~g~d-----v~~lee~~~~aDvVi~at 328 (488)
T 3ond_A 262 MIAG-KVAVVAGYGDVGKGCAAALKQA------GARVIVTEIDP-ICALQATMEGLQ-----VLTLEDVVSEADIFVTTT 328 (488)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHHTTCE-----ECCGGGTTTTCSEEEECS
T ss_pred cccC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH-HHHHHHHHhCCc-----cCCHHHHHHhcCEEEeCC
Confidence 4789 9999999999999999999999 99988776653 334556667876 467889999999999887
Q ss_pred CCchHHHHH-HHHHhcCCCCcEEEEecCc
Q 014834 187 SDAAQADNY-EKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 187 pd~~~~~Vl-~eI~~~lk~gaiLi~a~G~ 214 (417)
.... ++ .+....|+++.+|+.++.+
T Consensus 329 G~~~---vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 329 GNKD---IIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp SCSC---SBCHHHHTTSCTTEEEEESSST
T ss_pred CChh---hhhHHHHHhcCCCeEEEEcCCC
Confidence 6432 22 2356779999988866543
No 205
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.77 E-value=5.8e-05 Score=78.15 Aligned_cols=91 Identities=12% Similarity=0.158 Sum_probs=63.7
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHH-------------------HHHcC-ceecCCCcC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-------------------ARAAG-FTEENGTLG 170 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~-------------------A~~~G-~~~~~~~~~ 170 (417)
|.+|+|||+|-+|..+|..|.+. |++|+ +.+.++...+. +.+.| +.. +.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~------G~~V~-g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~----tt 89 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL------GHRVV-GYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSF----AE 89 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----CS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCcEE-EEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeE----Ec
Confidence 48999999999999999999999 99986 55544432222 22222 111 45
Q ss_pred CHHhhcCcCCEEEEccCCc----------hHHHHHHHHHhcCC---CCcEEEEec
Q 014834 171 DIYETISGSDLVLLLISDA----------AQADNYEKIFSCMK---PNSILGLSH 212 (417)
Q Consensus 171 s~~Ea~~~ADIViLavpd~----------~~~~Vl~eI~~~lk---~gaiLi~a~ 212 (417)
+.++++++||++|+|||.. ....+.+.|.++|+ +|++|++-+
T Consensus 90 ~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eS 144 (444)
T 3vtf_A 90 SAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKS 144 (444)
T ss_dssp SHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECS
T ss_pred CHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 7889999999999998721 23456667888875 467777544
No 206
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.77 E-value=0.00012 Score=72.49 Aligned_cols=93 Identities=12% Similarity=0.058 Sum_probs=60.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHH-------cCceecCCCcCCHHhhcCcCCEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------AGFTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~-------~G~~~~~~~~~s~~Ea~~~ADIVi 183 (417)
+||+|||.|.+|.++|..|... |+ +|.+++++.++....+.. .+....=..+.++++++++||+||
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~------g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi 83 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR------ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVI 83 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEE
Confidence 6999999999999999999998 88 877776654332221111 111100001257888999999999
Q ss_pred Ecc--CCc--h-----------------HHHHHHHHHhcCCCCcEEEEe
Q 014834 184 LLI--SDA--A-----------------QADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 184 Lav--pd~--~-----------------~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+++ |.. . ..+++++|.++. |+.+|+.+
T Consensus 84 ~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~ 131 (331)
T 1pzg_A 84 VTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVV 131 (331)
T ss_dssp ECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEE
Confidence 998 522 1 334555666664 67666544
No 207
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.77 E-value=4.6e-05 Score=76.24 Aligned_cols=99 Identities=14% Similarity=0.094 Sum_probs=67.9
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH-cCceec-C-CCcCCHHhhcCcCCEE
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEE-N-GTLGDIYETISGSDLV 182 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~-~G~~~~-~-~~~~s~~Ea~~~ADIV 182 (417)
..+++ ++|+|||.|.+|.++++.++.. |.+|++.+++..+ .+.+.+ .|.... + ....+.+++++++|+|
T Consensus 162 ~~l~~-~~V~ViGaG~iG~~~a~~l~~~------Ga~V~~~d~~~~~-~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 162 PGVAP-ASVVILGGGTVGTNAAKIALGM------GAQVTILDVNHKR-LQYLDDVFGGRVITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp TBBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHHHHTTTSEEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCHHH-HHHHHHhcCceEEEecCCHHHHHHHHhCCCEE
Confidence 46888 9999999999999999999998 9998888776443 333433 453210 0 0012466788899999
Q ss_pred EEccCCch--HHH-HHHHHHhcCCCCcEEEEec
Q 014834 183 LLLISDAA--QAD-NYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 183 iLavpd~~--~~~-Vl~eI~~~lk~gaiLi~a~ 212 (417)
|.+++... ... +.++..+.|++|.+|++.+
T Consensus 234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred EECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 99998543 122 2356678899998887655
No 208
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.76 E-value=2.5e-05 Score=76.77 Aligned_cols=83 Identities=11% Similarity=0.203 Sum_probs=57.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
.||+|||+|+||..++++|.+. .+++++ +.+++.++ +.+ .|+.. ..++++++.++|+|++++|+..
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~-----~~~elvav~d~~~~~--~~~--~gv~~----~~d~~~ll~~~DvViiatp~~~ 70 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQ-----PDMDLVGIFSRRATL--DTK--TPVFD----VADVDKHADDVDVLFLCMGSAT 70 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEEESSSCC--SSS--SCEEE----GGGGGGTTTTCSEEEECSCTTT
T ss_pred CEEEEEeecHHHHHHHHHHhcC-----CCCEEEEEEcCCHHH--hhc--CCCce----eCCHHHHhcCCCEEEEcCCcHH
Confidence 5899999999999999999875 145544 44444332 222 46543 4577787788999999999988
Q ss_pred HHHHHHHHHhcCCCCcEEEE
Q 014834 191 QADNYEKIFSCMKPNSILGL 210 (417)
Q Consensus 191 ~~~Vl~eI~~~lk~gaiLi~ 210 (417)
+.+.+. ..++.|+-|++
T Consensus 71 h~~~~~---~al~aG~~Vv~ 87 (320)
T 1f06_A 71 DIPEQA---PKFAQFACTVD 87 (320)
T ss_dssp HHHHHH---HHHTTTSEEEC
T ss_pred HHHHHH---HHHHCCCEEEE
Confidence 755443 33455775553
No 209
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.76 E-value=0.0002 Score=62.05 Aligned_cols=97 Identities=12% Similarity=-0.003 Sum_probs=62.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhH---HHHHHcCceecCCCcCC---HHhh-cCcCCEEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEARAAGFTEENGTLGD---IYET-ISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~---~~A~~~G~~~~~~~~~s---~~Ea-~~~ADIViL 184 (417)
++|.|+|+|.+|..+++.|.+. |++|++.++...... +.....|+....+...+ +.++ ++++|+|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~------g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR------GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 6899999999999999999998 999888777532212 22223354432222223 2344 789999999
Q ss_pred ccCCchHHHHHHHHHhcCCC-CcEEEEecCc
Q 014834 185 LISDAAQADNYEKIFSCMKP-NSILGLSHGF 214 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~-gaiLi~a~G~ 214 (417)
++++......+......+.+ ..++..+.+-
T Consensus 78 ~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 78 LSDNDADNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp CSSCHHHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred ecCChHHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 99987665544444444433 3455555443
No 210
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.75 E-value=4.5e-05 Score=77.90 Aligned_cols=87 Identities=10% Similarity=0.137 Sum_probs=61.1
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecC-CCcCCHHhhcC--cCCEEEEcc
Q 014834 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEEN-GTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~-~~~~s~~Ea~~--~ADIViLav 186 (417)
.||||||+|.||. .++.+|++. .+++++ |.++..++..+.+++.|+...+ ....+.+++++ +.|+|++++
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iat 158 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGC-----QHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIIL 158 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTC-----SSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECS
T ss_pred eEEEEECCcHHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcC
Confidence 5899999999997 899998764 145554 4455444445566677764100 01568888886 799999999
Q ss_pred CCchHHHHHHHHHhcCCCCc
Q 014834 187 SDAAQADNYEKIFSCMKPNS 206 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~ga 206 (417)
|+..+.++..... +.|+
T Consensus 159 p~~~h~~~~~~al---~aGk 175 (433)
T 1h6d_A 159 PNSLHAEFAIRAF---KAGK 175 (433)
T ss_dssp CGGGHHHHHHHHH---HTTC
T ss_pred CchhHHHHHHHHH---HCCC
Confidence 9999988776543 3455
No 211
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.74 E-value=8.3e-05 Score=68.80 Aligned_cols=94 Identities=12% Similarity=0.209 Sum_probs=63.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHH---hh-cCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ET-ISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~---Ea-~~~ADIViLavp 187 (417)
++|.|||+|.+|..+++.|.+. |+ |++.+++ ....+.+. .|+....+...+.+ ++ ++++|.|+++++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~------g~-v~vid~~-~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS------EV-FVLAEDE-NVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS------EE-EEEESCG-GGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEECCChHHHHHHHHHHhC------Ce-EEEEECC-HHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 7899999999999999999988 88 7766554 33344444 66543222233332 33 789999999999
Q ss_pred CchHHHHHHHHHhcCCCC-cEEEEecCc
Q 014834 188 DAAQADNYEKIFSCMKPN-SILGLSHGF 214 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~g-aiLi~a~G~ 214 (417)
+......+......+.++ .++..+..-
T Consensus 81 ~d~~n~~~~~~a~~~~~~~~iia~~~~~ 108 (234)
T 2aef_A 81 SDSETIHCILGIRKIDESVRIIAEAERY 108 (234)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEECSSG
T ss_pred CcHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 876654444444555666 566666543
No 212
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.74 E-value=0.00015 Score=70.98 Aligned_cols=70 Identities=19% Similarity=0.110 Sum_probs=46.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHH--HcC-------ceecCCCcCCHHhhcCcCCEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR--AAG-------FTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~--~~G-------~~~~~~~~~s~~Ea~~~ADIV 182 (417)
+||+|||.|.||.++|..|... +.|.+|++.+++..+....+. ..+ ... ....+.++ +++||+|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i--~~t~d~~~-l~~aDvV 73 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEK----QLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKV--TGSNDYAD-TANSDIV 73 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEE--EEESCGGG-GTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEE--EECCCHHH-HCCCCEE
Confidence 5899999999999999999874 115788877776443332221 111 111 01245655 8999999
Q ss_pred EEccCC
Q 014834 183 LLLISD 188 (417)
Q Consensus 183 iLavpd 188 (417)
|+++|.
T Consensus 74 iiav~~ 79 (310)
T 1guz_A 74 IITAGL 79 (310)
T ss_dssp EECCSC
T ss_pred EEeCCC
Confidence 999964
No 213
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.72 E-value=4.8e-05 Score=76.77 Aligned_cols=70 Identities=14% Similarity=0.094 Sum_probs=54.0
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC-cCCEEEEc
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLL 185 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~-~ADIViLa 185 (417)
.|+| ++|+|+|+|+||..+|+.|.+. |.+|++.+++..+..+.+.+.|... .+.+++.. +||+++.|
T Consensus 170 ~L~G-ktV~V~G~G~VG~~~A~~L~~~------GakVvv~D~~~~~l~~~a~~~ga~~-----v~~~~ll~~~~DIvip~ 237 (364)
T 1leh_A 170 SLEG-LAVSVQGLGNVAKALCKKLNTE------GAKLVVTDVNKAAVSAAVAEEGADA-----VAPNAIYGVTCDIFAPC 237 (364)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHCCEE-----CCGGGTTTCCCSEEEEC
T ss_pred CCCc-CEEEEECchHHHHHHHHHHHHC------CCEEEEEcCCHHHHHHHHHHcCCEE-----EChHHHhccCCcEeecc
Confidence 6889 9999999999999999999999 9998877765444445666667653 35555554 89999987
Q ss_pred cCC
Q 014834 186 ISD 188 (417)
Q Consensus 186 vpd 188 (417)
...
T Consensus 238 a~~ 240 (364)
T 1leh_A 238 ALG 240 (364)
T ss_dssp SCS
T ss_pred chH
Confidence 533
No 214
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.70 E-value=9.6e-05 Score=72.09 Aligned_cols=85 Identities=18% Similarity=0.197 Sum_probs=55.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
.||||||+|+||..++..|++. .+++++ +.++. ... +++.|+.. ....++.+. .++|+|++|+|+..
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~-----~~~elvav~d~~-~~~---~~~~g~~~--~~~~~l~~~-~~~DvViiatp~~~ 77 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREA-----PDFEIAGIVRRN-PAE---VPFELQPF--RVVSDIEQL-ESVDVALVCSPSRE 77 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECC-----------CCTTS--CEESSGGGS-SSCCEEEECSCHHH
T ss_pred CEEEEECChHHHHHHHHHHhcC-----CCCEEEEEEcCC-HHH---HHHcCCCc--CCHHHHHhC-CCCCEEEECCCchh
Confidence 5899999999999999999874 156765 34443 222 22256431 113445554 78999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEe
Q 014834 191 QADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 191 ~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+.++.... ++.|+-|++.
T Consensus 78 h~~~~~~a---l~aG~~Vi~e 95 (304)
T 3bio_A 78 VERTALEI---LKKGICTADS 95 (304)
T ss_dssp HHHHHHHH---HTTTCEEEEC
T ss_pred hHHHHHHH---HHcCCeEEEC
Confidence 98777654 3457755543
No 215
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.70 E-value=7.2e-05 Score=75.87 Aligned_cols=87 Identities=16% Similarity=0.196 Sum_probs=63.1
Q ss_pred CEEEEEcccc---hHHHHHHHHHhhhhhhcCC-cEEE--EEecCChhhHHHHHHcCceecCCCcCCHHhhcCc-------
Q 014834 112 NQIGVIGWGS---QGPAQAQNLRDSLAEAKSD-IVVK--VGLRKGSRSFAEARAAGFTEENGTLGDIYETISG------- 178 (417)
Q Consensus 112 kkIgIIG~G~---mG~AiA~~Lr~s~~~~~~G-~~Vi--Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~------- 178 (417)
.||||||+|. ||..++..++.. + ++++ +.++..++..+.+++.|+.. .....+.+|++++
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~------~~~~lva~v~d~~~~~a~~~a~~~g~~~-~~~~~~~~~ll~~~~~~~~~ 110 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLD------DHYELVAGALSSTPEKAEASGRELGLDP-SRVYSDFKEMAIREAKLKNG 110 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHT------SCEEEEEEECCSSHHHHHHHHHHHTCCG-GGBCSCHHHHHHHHHHCTTC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhC------CCcEEEEEEeCCCHHHHHHHHHHcCCCc-ccccCCHHHHHhcccccCCC
Confidence 4899999999 999999998876 4 5654 33455555567777888841 1126789998875
Q ss_pred CCEEEEccCCchHHHHHHHHHhcCCCCcEE
Q 014834 179 SDLVLLLISDAAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 179 ADIViLavpd~~~~~Vl~eI~~~lk~gaiL 208 (417)
.|+|++++|+..+.++.... |+.|+-|
T Consensus 111 vD~V~I~tp~~~H~~~~~~a---l~aGkhV 137 (417)
T 3v5n_A 111 IEAVAIVTPNHVHYAAAKEF---LKRGIHV 137 (417)
T ss_dssp CSEEEECSCTTSHHHHHHHH---HTTTCEE
T ss_pred CcEEEECCCcHHHHHHHHHH---HhCCCeE
Confidence 89999999999998877654 3456643
No 216
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.67 E-value=1.9e-05 Score=75.79 Aligned_cols=76 Identities=13% Similarity=-0.003 Sum_probs=54.2
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCc--eecCCCcCCHHhhcC-cCCEEE
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF--TEENGTLGDIYETIS-GSDLVL 183 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~--~~~~~~~~s~~Ea~~-~ADIVi 183 (417)
.++| ++|.|||.|.||.+++..|.+. |.+|++.+|+.++..+.+.+.+. .. ...+.+++.+ ++|+||
T Consensus 116 ~~~~-~~vlvlGaGg~g~a~a~~L~~~------G~~v~v~~R~~~~a~~l~~~~~~~~~~---~~~~~~~~~~~~~DivI 185 (272)
T 1p77_A 116 LRPN-QHVLILGAGGATKGVLLPLLQA------QQNIVLANRTFSKTKELAERFQPYGNI---QAVSMDSIPLQTYDLVI 185 (272)
T ss_dssp CCTT-CEEEEECCSHHHHTTHHHHHHT------TCEEEEEESSHHHHHHHHHHHGGGSCE---EEEEGGGCCCSCCSEEE
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHccccCCe---EEeeHHHhccCCCCEEE
Confidence 3578 9999999999999999999998 88999999986665566555332 10 0123444434 899999
Q ss_pred EccCCchHH
Q 014834 184 LLISDAAQA 192 (417)
Q Consensus 184 Lavpd~~~~ 192 (417)
.++|.....
T Consensus 186 n~t~~~~~~ 194 (272)
T 1p77_A 186 NATSAGLSG 194 (272)
T ss_dssp ECCCC----
T ss_pred ECCCCCCCC
Confidence 999987654
No 217
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.64 E-value=4.7e-05 Score=75.55 Aligned_cols=80 Identities=15% Similarity=0.085 Sum_probs=55.6
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcCc--CCEEEEccC
Q 014834 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~--ADIViLavp 187 (417)
.||||||+|.||.. ++.+|++. .+.+++ |+++..++..+.+.+.+... ...+.++++++ .|+|++++|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQM-----QDIRIVAACDSDLERARRVHRFISDIP---VLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTC-----TTEEEEEEECSSHHHHGGGGGTSCSCC---EESSHHHHHHHSCCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHHhcCCCc---ccCCHHHHhcCCCCCEEEEcCC
Confidence 58999999999985 88988764 156665 44444333333444443221 25789999875 499999999
Q ss_pred CchHHHHHHHHH
Q 014834 188 DAAQADNYEKIF 199 (417)
Q Consensus 188 d~~~~~Vl~eI~ 199 (417)
+..+.++.....
T Consensus 78 ~~~H~~~~~~al 89 (359)
T 3m2t_A 78 PQLHFEMGLLAM 89 (359)
T ss_dssp HHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 999988776543
No 218
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.64 E-value=0.00023 Score=70.32 Aligned_cols=91 Identities=15% Similarity=0.140 Sum_probs=58.1
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHH--c-------CceecCCCcCCHHhhcCcCC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA--A-------GFTEENGTLGDIYETISGSD 180 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~--~-------G~~~~~~~~~s~~Ea~~~AD 180 (417)
++||+|||.|.||.++|..|... |+ +|.+.+.+.++....+.. . .... ..+.+. +++++||
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~------g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i--~~t~d~-~al~~aD 74 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK------NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKV--SGSNTY-DDLAGAD 74 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCE--EEECCG-GGGTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEE--EECCCH-HHhCCCC
Confidence 37999999999999999999998 87 866666554322211111 1 1111 012466 7899999
Q ss_pred EEEEcc--CCc-------------------hHHHHHHHHHhcCCCCcEEEEe
Q 014834 181 LVLLLI--SDA-------------------AQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 IViLav--pd~-------------------~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+||+++ |.. ...+++++|.++. |+.+|+++
T Consensus 75 ~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 125 (322)
T 1t2d_A 75 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVV 125 (322)
T ss_dssp EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 999998 421 1234555666664 77766544
No 219
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.63 E-value=6e-05 Score=72.22 Aligned_cols=77 Identities=22% Similarity=0.099 Sum_probs=55.8
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhc-CcCCEEEEc
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLL 185 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~-~~ADIViLa 185 (417)
.++| +++.|+|.|.||.+++..|.+. |.+|++.+|+.++..+.+.+.+... .-...+.+++. .++|+||.+
T Consensus 116 ~l~~-k~vlViGaGg~g~a~a~~L~~~------G~~V~v~~R~~~~~~~la~~~~~~~-~~~~~~~~~~~~~~~DivVn~ 187 (271)
T 1nyt_A 116 IRPG-LRILLIGAGGASRGVLLPLLSL------DCAVTITNRTVSRAEELAKLFAHTG-SIQALSMDELEGHEFDLIINA 187 (271)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSGGGTTCCCSEEEEC
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHc------CCEEEEEECCHHHHHHHHHHhhccC-CeeEecHHHhccCCCCEEEEC
Confidence 3578 9999999999999999999999 9899998887665556665543200 00022333443 589999999
Q ss_pred cCCchH
Q 014834 186 ISDAAQ 191 (417)
Q Consensus 186 vpd~~~ 191 (417)
+|....
T Consensus 188 t~~~~~ 193 (271)
T 1nyt_A 188 TSSGIS 193 (271)
T ss_dssp CSCGGG
T ss_pred CCCCCC
Confidence 997654
No 220
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.62 E-value=0.00011 Score=73.91 Aligned_cols=84 Identities=19% Similarity=0.197 Sum_probs=60.1
Q ss_pred EEEEEcccchHHHHHHHHHhhh---hhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEcc
Q 014834 113 QIGVIGWGSQGPAQAQNLRDSL---AEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 113 kIgIIG~G~mG~AiA~~Lr~s~---~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLav 186 (417)
||||||+|.||..++.+|++.. .+...+.+|+ |.++..++..+.+++.|+.. ...|.+|+++ +.|+|++++
T Consensus 28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~---~y~d~~~ll~~~~vD~V~I~t 104 (412)
T 4gqa_A 28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEK---AYGDWRELVNDPQVDVVDITS 104 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHHCTTCCEEEECS
T ss_pred eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCe---EECCHHHHhcCCCCCEEEECC
Confidence 7999999999999999998750 0000023444 44555555667778888742 1578999885 579999999
Q ss_pred CCchHHHHHHHHH
Q 014834 187 SDAAQADNYEKIF 199 (417)
Q Consensus 187 pd~~~~~Vl~eI~ 199 (417)
|+..+.++....+
T Consensus 105 p~~~H~~~~~~al 117 (412)
T 4gqa_A 105 PNHLHYTMAMAAI 117 (412)
T ss_dssp CGGGHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 9999988776543
No 221
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.62 E-value=4.8e-05 Score=73.65 Aligned_cols=73 Identities=10% Similarity=0.084 Sum_probs=56.6
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCc---eecCCCcCCHHhhc-CcCCE
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETI-SGSDL 181 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~---~~~~~~~~s~~Ea~-~~ADI 181 (417)
.++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+.+.+. . ..+.+++. .++|+
T Consensus 117 ~l~~-k~~lvlGaGg~~~aia~~L~~~------G~~~v~i~~R~~~~a~~la~~~~~~~~~-----~~~~~~l~~~~~Di 184 (272)
T 3pwz_A 117 PLRN-RRVLLLGAGGAVRGALLPFLQA------GPSELVIANRDMAKALALRNELDHSRLR-----ISRYEALEGQSFDI 184 (272)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------CCSEEEEECSCHHHHHHHHHHHCCTTEE-----EECSGGGTTCCCSE
T ss_pred CccC-CEEEEECccHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHHhccCCee-----EeeHHHhcccCCCE
Confidence 3578 9999999999999999999998 96 899999987666677766542 2 12333433 78999
Q ss_pred EEEccCCchH
Q 014834 182 VLLLISDAAQ 191 (417)
Q Consensus 182 ViLavpd~~~ 191 (417)
||.+||....
T Consensus 185 vInaTp~gm~ 194 (272)
T 3pwz_A 185 VVNATSASLT 194 (272)
T ss_dssp EEECSSGGGG
T ss_pred EEECCCCCCC
Confidence 9999997654
No 222
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.61 E-value=0.00015 Score=70.73 Aligned_cols=85 Identities=8% Similarity=0.053 Sum_probs=58.8
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc-CceecCCCcCCHHhhc----------Cc
Q 014834 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETI----------SG 178 (417)
Q Consensus 111 mkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~-G~~~~~~~~~s~~Ea~----------~~ 178 (417)
|.||||||+ |.+|..++..|++. +.+++...+.+......++.. +... ..+.++++ .+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~l~~~~~~ 72 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV------GGVLVASLDPATNVGLVDSFFPEAEF----FTEPEAFEAYLEDLRDRGEG 72 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT------TCEEEEEECSSCCCGGGGGTCTTCEE----ESCHHHHHHHHHHHHHTTCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhC------CCEEEEEEcCCHHHHHHHhhCCCCce----eCCHHHHHHHhhhhcccCCC
Confidence 689999999 78999999999987 776554433322222223333 2332 56788876 67
Q ss_pred CCEEEEccCCchHHHHHHHHHhcCCCCcEE
Q 014834 179 SDLVLLLISDAAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 179 ADIViLavpd~~~~~Vl~eI~~~lk~gaiL 208 (417)
.|+|++++|+..+.++...... .|+-|
T Consensus 73 vD~V~I~tP~~~H~~~~~~al~---aGkhV 99 (312)
T 3o9z_A 73 VDYLSIASPNHLHYPQIRMALR---LGANA 99 (312)
T ss_dssp CSEEEECSCGGGHHHHHHHHHH---TTCEE
T ss_pred CcEEEECCCchhhHHHHHHHHH---CCCeE
Confidence 9999999999999887765443 45533
No 223
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.60 E-value=3.8e-05 Score=75.11 Aligned_cols=117 Identities=13% Similarity=0.240 Sum_probs=76.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
.+|+|+|+ |.||..++++|++. |++++....+..... .-.|+.. ..+++|+.+ ..|++++++|+
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~------g~~~V~~VnP~~~g~---~i~G~~v----y~sl~el~~~~~~Dv~ii~vp~ 80 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLEC------GTKIVGGVTPGKGGQ---NVHGVPV----FDTVKEAVKETDANASVIFVPA 80 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT------TCCEEEEECTTCTTC---EETTEEE----ESSHHHHHHHHCCCEEEECCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHhC------CCeEEEEeCCCCCCc---eECCEee----eCCHHHHhhcCCCCEEEEccCH
Confidence 46788899 99999999999998 887443433321000 1257765 678999888 89999999999
Q ss_pred chHHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchh
Q 014834 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~ 243 (417)
..+.+++++.... ....+|+++.||......+ ....-+...+..+.||++|-.
T Consensus 81 ~~~~~~v~ea~~~-Gi~~vVi~t~G~~~~~~~~-l~~~A~~~gi~viGPNc~Gii 133 (294)
T 2yv1_A 81 PFAKDAVFEAIDA-GIELIVVITEHIPVHDTME-FVNYAEDVGVKIIGPNTPGIA 133 (294)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECCSCCCHHHHHH-HHHHHHHHTCEEECSSCCEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEcCCCceee
Confidence 9999999876553 2233667889996532111 001111223445567777654
No 224
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.60 E-value=0.00016 Score=70.75 Aligned_cols=80 Identities=9% Similarity=0.062 Sum_probs=56.3
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc-CceecCCCcCCHHhhc-----------C
Q 014834 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETI-----------S 177 (417)
Q Consensus 111 mkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~-G~~~~~~~~~s~~Ea~-----------~ 177 (417)
|.||||||+ |.||..++.+|++. +.+++...+.+......+... +... ..+.++++ .
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~l~~~~~~ 72 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT------GNCLVSAYDINDSVGIIDSISPQSEF----FTEFEFFLDHASNLKRDSAT 72 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT------TCEEEEEECSSCCCGGGGGTCTTCEE----ESSHHHHHHHHHHHTTSTTT
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC------CCEEEEEEcCCHHHHHHHhhCCCCcE----ECCHHHHHHhhhhhhhccCC
Confidence 589999999 79999999999987 776554433322222223333 3332 56788775 5
Q ss_pred cCCEEEEccCCchHHHHHHHHHh
Q 014834 178 GSDLVLLLISDAAQADNYEKIFS 200 (417)
Q Consensus 178 ~ADIViLavpd~~~~~Vl~eI~~ 200 (417)
+.|+|++++|+..+.++......
T Consensus 73 ~vD~V~I~tP~~~H~~~~~~al~ 95 (318)
T 3oa2_A 73 ALDYVSICSPNYLHYPHIAAGLR 95 (318)
T ss_dssp SCCEEEECSCGGGHHHHHHHHHH
T ss_pred CCcEEEECCCcHHHHHHHHHHHH
Confidence 78999999999999887765443
No 225
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.59 E-value=0.00013 Score=71.85 Aligned_cols=80 Identities=19% Similarity=0.180 Sum_probs=59.6
Q ss_pred CEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCc-eecCCCcCCHHhhcC--cCCEEEEcc
Q 014834 112 NQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGF-TEENGTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G-~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~-~~~~~~~~s~~Ea~~--~ADIViLav 186 (417)
.+|||||+| .+|..++..|++. +.+++++ |.++..++..+.+++.|+ .. ..+.+|+++ +.|+|++++
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~a~~~~~~~~----~~~~~~ll~~~~vD~V~i~t 90 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNL----SHLFEITAVTSRTRSHAEEFAKMVGNPAV----FDSYEELLESGLVDAVDLTL 90 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTT----TTTEEEEEEECSSHHHHHHHHHHHSSCEE----ESCHHHHHHSSCCSEEEECC
T ss_pred eeEEEEecCHHHHHHHHHHHHhC----CCceEEEEEEcCCHHHHHHHHHHhCCCcc----cCCHHHHhcCCCCCEEEEeC
Confidence 589999999 8999999999864 1145653 445554455566777786 33 678999885 589999999
Q ss_pred CCchHHHHHHHHH
Q 014834 187 SDAAQADNYEKIF 199 (417)
Q Consensus 187 pd~~~~~Vl~eI~ 199 (417)
|+..+.++.....
T Consensus 91 p~~~H~~~~~~al 103 (340)
T 1zh8_A 91 PVELNLPFIEKAL 103 (340)
T ss_dssp CGGGHHHHHHHHH
T ss_pred CchHHHHHHHHHH
Confidence 9999988776543
No 226
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.59 E-value=0.00018 Score=71.35 Aligned_cols=94 Identities=17% Similarity=0.177 Sum_probs=62.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCChhhHHHHHHcCceecC--------------CCcCCHHhhc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEEN--------------GTLGDIYETI 176 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViV-g~r~~s~s~~~A~~~G~~~~~--------------~~~~s~~Ea~ 176 (417)
.||||||+|.||..+++.|... .+++++. .++........++.+|+.... ....+.++++
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~-----~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~ 77 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQ-----DDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL 77 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcC-----CCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhc
Confidence 5899999999999999999875 1455543 344333334556666643100 0124678888
Q ss_pred CcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 177 ~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
.+.|+|++|+|...+.+..... ++.|+.|++.+.
T Consensus 78 ~~vDvV~~aTp~~~h~~~a~~~---l~aGk~Vi~sap 111 (334)
T 2czc_A 78 EKVDIIVDATPGGIGAKNKPLY---EKAGVKAIFQGG 111 (334)
T ss_dssp TTCSEEEECCSTTHHHHHHHHH---HHHTCEEEECTT
T ss_pred cCCCEEEECCCccccHHHHHHH---HHcCCceEeecc
Confidence 8999999999999887766533 344665555543
No 227
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.58 E-value=0.00021 Score=70.21 Aligned_cols=72 Identities=19% Similarity=0.195 Sum_probs=45.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHHc--CceecC-C--CcCCHHhhcCcCCEEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA--GFTEEN-G--TLGDIYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~~--G~~~~~-~--~~~s~~Ea~~~ADIViL 184 (417)
+||+|||.|+||.+++..|+.. |+ +|++.+++.++....+.+. ...... . ...+..+++++||+||+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~------~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvVii 80 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ------GIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVI 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEE
Confidence 7999999999999999999887 65 6766655432211111111 110000 0 01234578999999999
Q ss_pred ccCCc
Q 014834 185 LISDA 189 (417)
Q Consensus 185 avpd~ 189 (417)
+++..
T Consensus 81 a~~~~ 85 (316)
T 1ldn_A 81 CAGAN 85 (316)
T ss_dssp CCSCC
T ss_pred cCCCC
Confidence 97644
No 228
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.58 E-value=0.00017 Score=71.05 Aligned_cols=84 Identities=14% Similarity=0.145 Sum_probs=58.9
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHH---cCceecCCCcCCHHhhcCc--CCEEEE
Q 014834 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARA---AGFTEENGTLGDIYETISG--SDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~---~G~~~~~~~~~s~~Ea~~~--ADIViL 184 (417)
.||||||+|.||. .++..|+.. .+++|+ |.++. +..+.+.+ .|+.. ..+.+|++.+ .|+|++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~--~~~~~a~~~~~~~~~~----~~~~~~ll~~~~~D~V~i 71 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIR-----ETLEVKTIFDLH--VNEKAAAPFKEKGVNF----TADLNELLTDPEIELITI 71 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECTT--CCHHHHHHHHTTTCEE----ESCTHHHHSCTTCCEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEECCC--HHHHHHHhhCCCCCeE----ECCHHHHhcCCCCCEEEE
Confidence 5899999999998 577777654 156664 34443 44455555 45554 6789999876 899999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEE
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi 209 (417)
++|+..+.++..... +.|+-|.
T Consensus 72 ~tp~~~h~~~~~~al---~aGk~Vl 93 (349)
T 3i23_A 72 CTPAHTHYDLAKQAI---LAGKSVI 93 (349)
T ss_dssp CSCGGGHHHHHHHHH---HTTCEEE
T ss_pred eCCcHHHHHHHHHHH---HcCCEEE
Confidence 999999988776543 3455433
No 229
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.57 E-value=9e-05 Score=72.55 Aligned_cols=117 Identities=13% Similarity=0.237 Sum_probs=75.9
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC--c-CCEEEEccC
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--G-SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~-ADIViLavp 187 (417)
.+|.|+|+ |.||..++++|++. |++++....+...-. .-.|+.. ..+++|+.+ . .|++++++|
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~------g~~~v~~VnP~~~g~---~i~G~~v----y~sl~el~~~~~~~DvaIi~vp 80 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEY------GTKVVAGVTPGKGGS---EVHGVPV----YDSVKEALAEHPEINTSIVFVP 80 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTTC---EETTEEE----ESSHHHHHHHCTTCCEEEECCC
T ss_pred CEEEEECCCCCHHHHHHHHHHhC------CCcEEEEeCCCCCCc---eECCEee----eCCHHHHhhcCCCCCEEEEecC
Confidence 46777898 99999999999998 888443443321000 1257765 678888876 5 999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecCchhhhhhhcccCCCCCccEEEeccCCCchh
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~ 243 (417)
+....+++++.... .-..+|+++.||......+ ....-++..+..+.||++|-.
T Consensus 81 ~~~~~~~v~ea~~~-Gi~~vVi~t~G~~~~~~~~-l~~~A~~~gi~viGPNc~Gii 134 (297)
T 2yv2_A 81 APFAPDAVYEAVDA-GIRLVVVITEGIPVHDTMR-FVNYARQKGATIIGPNCPGAI 134 (297)
T ss_dssp GGGHHHHHHHHHHT-TCSEEEECCCCCCHHHHHH-HHHHHHHHTCEEECSSSCEEE
T ss_pred HHHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEcCCCCeeE
Confidence 99999999886553 2233667899996432111 001111223445567777654
No 230
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.55 E-value=0.00026 Score=70.36 Aligned_cols=85 Identities=7% Similarity=0.035 Sum_probs=61.2
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcCc--CCEEEEccC
Q 014834 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~--ADIViLavp 187 (417)
.||||||+|.+|. .++..++.. +++++ |.++..++..+.+++.|... ...+.+|++++ .|+|++++|
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~------~~~lvav~d~~~~~a~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRA------GARLAGFHEKDDALAAEFSAVYADAR---RIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHT------TCEEEEEECSCHHHHHHHHHHSSSCC---EESCHHHHHTCTTCCEEEECCC
T ss_pred cEEEEECcCHHHHHHHHHHhhcC------CcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 5899999999994 567777766 77765 44454445556677777431 16789999875 899999999
Q ss_pred CchHHHHHHHHHhcCCCCcEE
Q 014834 188 DAAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiL 208 (417)
+..+.++..... +.|+-|
T Consensus 98 ~~~H~~~~~~al---~aGkhV 115 (361)
T 3u3x_A 98 SSERAELAIRAM---QHGKDV 115 (361)
T ss_dssp HHHHHHHHHHHH---HTTCEE
T ss_pred hHHHHHHHHHHH---HCCCeE
Confidence 999988776543 345533
No 231
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.54 E-value=5.9e-05 Score=74.17 Aligned_cols=86 Identities=10% Similarity=0.103 Sum_probs=56.6
Q ss_pred CEEEEEcccchHHH-HHHHH-HhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcCc--CCEEEEcc
Q 014834 112 NQIGVIGWGSQGPA-QAQNL-RDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~L-r~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~--ADIViLav 186 (417)
.||||||+|.||.. ++.++ ... .+++++ |+++..++....+...|... ..+.+|++.+ .|+|++++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~t 73 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRK-----DSWHVAHIFRRHAKPEEQAPIYSHIHF----TSDLDEVLNDPDVKLVVVCT 73 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCT-----TTEEEEEEECSSCCGGGGSGGGTTCEE----ESCTHHHHTCTTEEEEEECS
T ss_pred eEEEEEecCHHHHHHHHHHHHhcC-----CCeEEEEEEcCCHhHHHHHHhcCCCce----ECCHHHHhcCCCCCEEEEcC
Confidence 68999999999986 45524 332 156665 45554433322222235554 5789999876 89999999
Q ss_pred CCchHHHHHHHHHhcCCCCcEEE
Q 014834 187 SDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~gaiLi 209 (417)
|+..+.++..... +.|+-|+
T Consensus 74 p~~~h~~~~~~al---~aGk~Vl 93 (345)
T 3f4l_A 74 HADSHFEYAKRAL---EAGKNVL 93 (345)
T ss_dssp CGGGHHHHHHHHH---HTTCEEE
T ss_pred ChHHHHHHHHHHH---HcCCcEE
Confidence 9999988776543 3566444
No 232
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.54 E-value=0.0001 Score=71.44 Aligned_cols=68 Identities=21% Similarity=0.057 Sum_probs=55.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd 188 (417)
.| +++.|||.|-||.+++..|.+. |.+|.|.+|+.++..+.+ +.|+.. .+.+++ .++|+||.+||.
T Consensus 117 ~~-k~vlvlGaGGaaraia~~L~~~------G~~v~V~nRt~~ka~~la-~~~~~~-----~~~~~l-~~~DiVInaTp~ 182 (269)
T 3phh_A 117 NY-QNALILGAGGSAKALACELKKQ------GLQVSVLNRSSRGLDFFQ-RLGCDC-----FMEPPK-SAFDLIINATSA 182 (269)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTHHHHH-HHTCEE-----ESSCCS-SCCSEEEECCTT
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHH-HCCCeE-----ecHHHh-ccCCEEEEcccC
Confidence 37 9999999999999999999998 888999999887777777 777653 234443 389999999996
Q ss_pred ch
Q 014834 189 AA 190 (417)
Q Consensus 189 ~~ 190 (417)
..
T Consensus 183 Gm 184 (269)
T 3phh_A 183 SL 184 (269)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 233
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.50 E-value=0.00037 Score=69.23 Aligned_cols=84 Identities=17% Similarity=0.225 Sum_probs=57.2
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc-CceecCCCcCCHHhhcC--cCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS--GSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~-G~~~~~~~~~s~~Ea~~--~ADIViLavp 187 (417)
.||||||+|.||.. ++..|+.. .+++++...+.+.... +.+. +... ..+.+++++ +.|+|++++|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~--~~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp 76 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSV-----PGLNLAFVASRDEEKV--KRDLPDVTV----IASPEAAVQHPDVDLVVIASP 76 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECSCHHHH--HHHCTTSEE----ESCHHHHHTCTTCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHHHH--HhhCCCCcE----ECCHHHHhcCCCCCEEEEeCC
Confidence 58999999999997 77777764 1556643333333222 2333 4443 678999987 7899999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEE
Q 014834 188 DAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi 209 (417)
+..+.++..... +.|+-|+
T Consensus 77 ~~~H~~~~~~al---~aGk~Vl 95 (364)
T 3e82_A 77 NATHAPLARLAL---NAGKHVV 95 (364)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred hHHHHHHHHHHH---HCCCcEE
Confidence 999988776543 3465444
No 234
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.50 E-value=0.00057 Score=67.05 Aligned_cols=90 Identities=14% Similarity=0.112 Sum_probs=57.5
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCCh---hhHHHHHHc--CceecCCCcCCHHhhcCcCCEEE
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGS---RSFAEARAA--GFTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s---~s~~~A~~~--G~~~~~~~~~s~~Ea~~~ADIVi 183 (417)
++||+|||.|+||..++..|... |+ +|.+.+...+ ...+...-. .+.. ..+. +++++||+||
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~------g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~----t~d~-~~l~~aD~Vi 82 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK------GIADRLVLLDLSEGTKGATMDLEIFNLPNVEI----SKDL-SASAHSKVVI 82 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECCC-----CHHHHHHHTCTTEEE----ESCG-GGGTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE----eCCH-HHHCCCCEEE
Confidence 48999999999999999999988 77 7877766532 222222211 1221 2566 7789999999
Q ss_pred EccCCch---------------HHHHHHHHHhcCCCCcEEEEec
Q 014834 184 LLISDAA---------------QADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 184 Lavpd~~---------------~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
++..... ..++++++..+- |+.+|++++
T Consensus 83 ~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~s 125 (303)
T 2i6t_A 83 FTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVAS 125 (303)
T ss_dssp ECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECS
T ss_pred EcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcC
Confidence 9972211 234555566554 777665443
No 235
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.48 E-value=0.00065 Score=66.44 Aligned_cols=67 Identities=15% Similarity=0.155 Sum_probs=45.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHH--cC-------ceecCCCcCCHHhhcCcCCE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA--AG-------FTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~--~G-------~~~~~~~~~s~~Ea~~~ADI 181 (417)
+||+|||.|.||.+++..|... |+ +|.+.+.+.++....+.+ .+ ... ..+.+. +++++||+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~------g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i--~~t~d~-~a~~~aD~ 73 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK------ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRV--TGTNNY-ADTANSDV 73 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCE--EEESCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEE--EECCCH-HHHCCCCE
Confidence 6999999999999999999888 86 866665544332221221 11 111 002456 78999999
Q ss_pred EEEccC
Q 014834 182 VLLLIS 187 (417)
Q Consensus 182 ViLavp 187 (417)
||+++.
T Consensus 74 Vi~a~g 79 (309)
T 1ur5_A 74 IVVTSG 79 (309)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999974
No 236
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.46 E-value=0.00035 Score=69.18 Aligned_cols=83 Identities=11% Similarity=0.202 Sum_probs=57.4
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc-CceecCCCcCCHHhhcC--cCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS--GSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~-G~~~~~~~~~s~~Ea~~--~ADIViLavp 187 (417)
.||||||+|.||.. ++..|+.. .+++++...+.+.. +.+.+. +... ..+.+++++ +.|+|++++|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~--~~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp 74 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVL-----DEYQISKIMTSRTE--EVKRDFPDAEV----VHELEEITNDPAIELVIVTTP 74 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECSCHH--HHHHHCTTSEE----ESSTHHHHTCTTCCEEEECSC
T ss_pred ceEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHH--HHHhhCCCCce----ECCHHHHhcCCCCCEEEEcCC
Confidence 58999999999997 77777654 15666433333332 244455 4443 578999987 7899999999
Q ss_pred CchHHHHHHHHHhcCCCCcEE
Q 014834 188 DAAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiL 208 (417)
+..+.++..... +.|+-|
T Consensus 75 ~~~H~~~~~~al---~aGkhV 92 (358)
T 3gdo_A 75 SGLHYEHTMACI---QAGKHV 92 (358)
T ss_dssp TTTHHHHHHHHH---HTTCEE
T ss_pred cHHHHHHHHHHH---HcCCeE
Confidence 999988776543 345533
No 237
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.45 E-value=0.00047 Score=70.36 Aligned_cols=78 Identities=14% Similarity=0.123 Sum_probs=55.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHH---HcCc---eecCCCcC----CHHhhcC--c
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEAR---AAGF---TEENGTLG----DIYETIS--G 178 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~---~~G~---~~~~~~~~----s~~Ea~~--~ 178 (417)
.||||||+|.||..++.+|+.. .+++++ |.++..++..+.++ +.|+ .. .. +.+|+++ +
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~-----~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~----~~~~~~~~~~ll~~~~ 91 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARR-----DDVEIVAFADPDPYMVGRAQEILKKNGKKPAKV----FGNGNDDYKNMLKDKN 91 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEE----ECSSTTTHHHHTTCTT
T ss_pred ceEEEEecCHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCce----eccCCCCHHHHhcCCC
Confidence 5899999999999999998864 156654 44444333333333 3463 32 45 8999987 5
Q ss_pred CCEEEEccCCchHHHHHHHH
Q 014834 179 SDLVLLLISDAAQADNYEKI 198 (417)
Q Consensus 179 ADIViLavpd~~~~~Vl~eI 198 (417)
.|+|++++|+..+.++....
T Consensus 92 vD~V~i~tp~~~h~~~~~~a 111 (444)
T 2ixa_A 92 IDAVFVSSPWEWHHEHGVAA 111 (444)
T ss_dssp CCEEEECCCGGGHHHHHHHH
T ss_pred CCEEEEcCCcHHHHHHHHHH
Confidence 89999999999998877653
No 238
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.44 E-value=0.0006 Score=69.61 Aligned_cols=94 Identities=14% Similarity=0.183 Sum_probs=65.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCH---Hhh-cCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YET-ISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~---~Ea-~~~ADIViLavp 187 (417)
++|.|||+|.+|..+++.|+.. |++|++.+++ ....+.+++.|+....|...+. .++ +.+||+||++++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~------g~~vvvId~d-~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS------GVKMVVLDHD-PDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEECC-HHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 6799999999999999999999 9998776655 4556777778875432222332 233 789999999999
Q ss_pred CchHHHHHHHHHhcCCCC-cEEEEec
Q 014834 188 DAAQADNYEKIFSCMKPN-SILGLSH 212 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~g-aiLi~a~ 212 (417)
+......+-.....+.|+ .+|+-+.
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 876654444444445555 4555444
No 239
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.43 E-value=0.00026 Score=70.28 Aligned_cols=86 Identities=12% Similarity=0.083 Sum_probs=63.9
Q ss_pred CEEEEEc-ccchHHH-HH----HHHHhhhhhhcCC-cE----------EEEEecCChhhHHHHHHcCceecCCCcCCHHh
Q 014834 112 NQIGVIG-WGSQGPA-QA----QNLRDSLAEAKSD-IV----------VKVGLRKGSRSFAEARAAGFTEENGTLGDIYE 174 (417)
Q Consensus 112 kkIgIIG-~G~mG~A-iA----~~Lr~s~~~~~~G-~~----------ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~E 174 (417)
.|||||| +|.||.. ++ ..+++. + +. +.+.++..++..+.+++.|+.. ...+.+|
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~------~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~---~~~~~~~ 77 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQ------GGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIAR---WTTDLDA 77 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHH------TSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCC---EESCHHH
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhc------CceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCc---ccCCHHH
Confidence 4799999 9999998 77 777766 3 22 1366777677777888888842 1578999
Q ss_pred hcCc--CCEEEEccCCchHHHHHHHHHhcCCCCcEEE
Q 014834 175 TISG--SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 175 a~~~--ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi 209 (417)
++++ .|+|++++|+..+.++.... |+.|+-|.
T Consensus 78 ll~~~~iD~V~i~tp~~~h~~~~~~a---l~~Gk~V~ 111 (383)
T 3oqb_A 78 ALADKNDTMFFDAATTQARPGLLTQA---INAGKHVY 111 (383)
T ss_dssp HHHCSSCCEEEECSCSSSSHHHHHHH---HTTTCEEE
T ss_pred HhcCCCCCEEEECCCchHHHHHHHHH---HHCCCeEE
Confidence 8865 89999999999998877554 34566444
No 240
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.39 E-value=0.00076 Score=65.95 Aligned_cols=67 Identities=16% Similarity=0.127 Sum_probs=46.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhH----HHHHH---cC--ceecCCCcCCHHhhcCcCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSF----AEARA---AG--FTEENGTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~----~~A~~---~G--~~~~~~~~~s~~Ea~~~AD 180 (417)
|||+|||.|++|.++|..|... |+ +|.+.++..++.. +.... .+ ... ....+ .+++++||
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~------~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i--~~t~d-~~a~~~aD 71 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKI--VGGAD-YSLLKGSE 71 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEE--EEESC-GGGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEE--EEeCC-HHHhCCCC
Confidence 5899999999999999999988 87 7877776543321 11111 11 111 00235 78999999
Q ss_pred EEEEccC
Q 014834 181 LVLLLIS 187 (417)
Q Consensus 181 IViLavp 187 (417)
+||++..
T Consensus 72 iVViaag 78 (294)
T 1oju_A 72 IIVVTAG 78 (294)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999864
No 241
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.39 E-value=0.00039 Score=68.50 Aligned_cols=84 Identities=10% Similarity=0.147 Sum_probs=55.6
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCc--CCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~--ADIViLavpd 188 (417)
.||||||+|.||.. ++..|++. .+++++...+.+....+ +...+... ..+.+|++.+ .|+|++++|+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~-----~~~~l~av~d~~~~~~~-~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp~ 77 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGT-----PGLELAGVSSSDASKVH-ADWPAIPV----VSDPQMLFNDPSIDLIVIPTPN 77 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECSCHHHHH-TTCSSCCE----ESCHHHHHHCSSCCEEEECSCT
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-----CCcEEEEEECCCHHHHH-hhCCCCce----ECCHHHHhcCCCCCEEEEeCCh
Confidence 58999999999997 78888764 14565433333222221 11123332 5789998865 8999999999
Q ss_pred chHHHHHHHHHhcCCCCcEE
Q 014834 189 AAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiL 208 (417)
..+.++..... +.|+-|
T Consensus 78 ~~H~~~~~~al---~aGkhV 94 (352)
T 3kux_A 78 DTHFPLAQSAL---AAGKHV 94 (352)
T ss_dssp TTHHHHHHHHH---HTTCEE
T ss_pred HHHHHHHHHHH---HCCCcE
Confidence 99988776543 345533
No 242
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.39 E-value=0.00023 Score=73.78 Aligned_cols=83 Identities=7% Similarity=0.106 Sum_probs=60.0
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEE
Q 014834 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViL 184 (417)
.+|||||+ |.||..++.+|+.. ..+++++ |.++..++..+.+.+.|+.. .....+.+|+++ +.|+|++
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~----~~~~~lvav~d~~~~~a~~~a~~~g~~~-~~~~~d~~ell~~~~vD~V~I 114 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQL----SSQFQIVALYNPTLKSSLQTIEQLQLKH-ATGFDSLESFAQYKDIDMIVV 114 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHT----TTTEEEEEEECSCHHHHHHHHHHTTCTT-CEEESCHHHHHHCTTCSEEEE
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhc----CCCeEEEEEEeCCHHHHHHHHHHcCCCc-ceeeCCHHHHhcCCCCCEEEE
Confidence 68999999 99999999999863 0156654 44555445556677778640 011678999885 6899999
Q ss_pred ccCCchHHHHHHHHH
Q 014834 185 LISDAAQADNYEKIF 199 (417)
Q Consensus 185 avpd~~~~~Vl~eI~ 199 (417)
++|+..+.++....+
T Consensus 115 ~tp~~~H~~~~~~al 129 (479)
T 2nvw_A 115 SVKVPEHYEVVKNIL 129 (479)
T ss_dssp CSCHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHH
Confidence 999999988776543
No 243
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.34 E-value=0.00029 Score=69.72 Aligned_cols=76 Identities=12% Similarity=0.140 Sum_probs=54.4
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHc-CceecCCCcCCHHhhcCc--CCEEEEcc
Q 014834 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAA-GFTEENGTLGDIYETISG--SDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~-G~~~~~~~~~s~~Ea~~~--ADIViLav 186 (417)
.||||||+|.||.. ++..|+.. .+++++ |.++..++ .+.+. +... ..+.+|++++ .|+|++++
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~---~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~t 73 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTN-----PHFELYKIVERSKEL---SKERYPQASI----VRSFKELTEDPEIDLIVVNT 73 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHC-----TTEEEEEEECSSCCG---GGTTCTTSEE----ESCSHHHHTCTTCCEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHHH---HHHhCCCCce----ECCHHHHhcCCCCCEEEEeC
Confidence 58999999999997 77777664 155654 34444332 33444 4443 6789999876 89999999
Q ss_pred CCchHHHHHHHHH
Q 014834 187 SDAAQADNYEKIF 199 (417)
Q Consensus 187 pd~~~~~Vl~eI~ 199 (417)
|+..+.++.....
T Consensus 74 p~~~H~~~~~~al 86 (362)
T 3fhl_A 74 PDNTHYEYAGMAL 86 (362)
T ss_dssp CGGGHHHHHHHHH
T ss_pred ChHHHHHHHHHHH
Confidence 9999988776543
No 244
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.32 E-value=0.0012 Score=65.51 Aligned_cols=72 Identities=19% Similarity=0.157 Sum_probs=47.8
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhH----HHHHH-----cCceecCCCcCCHHhh
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSF----AEARA-----AGFTEENGTLGDIYET 175 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~----~~A~~-----~G~~~~~~~~~s~~Ea 175 (417)
..++. +||+|||.|.||.++|..|... |+ +|.+.++..++.. +.... ...... ...+. ++
T Consensus 3 ~~m~~-~kI~viGaG~vG~~~a~~l~~~------~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~--~t~d~-~a 72 (324)
T 3gvi_A 3 GSMAR-NKIALIGSGMIGGTLAHLAGLK------ELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFT--GANDY-AA 72 (324)
T ss_dssp ---CC-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE--EESSG-GG
T ss_pred CCCcC-CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEE--EeCCH-HH
Confidence 44555 8999999999999999999988 77 8887776654332 11111 111110 02344 88
Q ss_pred cCcCCEEEEccC
Q 014834 176 ISGSDLVLLLIS 187 (417)
Q Consensus 176 ~~~ADIViLavp 187 (417)
+++||+||++..
T Consensus 73 ~~~aDiVIiaag 84 (324)
T 3gvi_A 73 IEGADVVIVTAG 84 (324)
T ss_dssp GTTCSEEEECCS
T ss_pred HCCCCEEEEccC
Confidence 999999999964
No 245
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.30 E-value=0.00073 Score=66.48 Aligned_cols=89 Identities=12% Similarity=0.193 Sum_probs=55.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHH--cCc------eecCCCcCCHHhhcCcCCE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGF------TEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~--~G~------~~~~~~~~s~~Ea~~~ADI 181 (417)
+||+|||.|++|.+++..|... |+ +|.+.+....+....+.+ .+. .. ..+..+++++||+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~------~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i----~~~~~~a~~~aDv 77 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR------QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSL----YAGDYSDVKDCDV 77 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEE----C--CGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEE----EECCHHHhCCCCE
Confidence 6899999999999999999988 76 777666553332222222 221 11 1123677999999
Q ss_pred EEEccCCch----------------HHHHHHHHHhcCCCCcEEEEe
Q 014834 182 VLLLISDAA----------------QADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 182 ViLavpd~~----------------~~~Vl~eI~~~lk~gaiLi~a 211 (417)
||++++... ..++.+.|.++ .|+.+|++.
T Consensus 78 Vii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (318)
T 1y6j_A 78 IVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV 122 (318)
T ss_dssp EEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred EEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 999987432 12344455555 577776654
No 246
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.30 E-value=0.00024 Score=71.60 Aligned_cols=86 Identities=9% Similarity=0.071 Sum_probs=62.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCch
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~ 190 (417)
.||+|||+| +|...+..+++. ..+++++ |.++..++..+.|++.|+.. ..|.++++.+.|+|+++||+..
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~----~~~~elvav~~~~~~~a~~~a~~~gv~~----~~~~~~l~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQP----PEGLELVGLLAQGSARSRELAHAFGIPL----YTSPEQITGMPDIACIVVRSTV 78 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSC----CTTEEEEEEECCSSHHHHHHHHHTTCCE----ESSGGGCCSCCSEEEECCC--C
T ss_pred CEEEEEehH-HHHHHHHHHHhC----CCCeEEEEEECCCHHHHHHHHHHhCCCE----ECCHHHHhcCCCEEEEECCCcc
Confidence 589999999 799888887764 1145654 45666677888899999875 6899999999999999999887
Q ss_pred H----HHHHHHHHhcCCCCcEEE
Q 014834 191 Q----ADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 191 ~----~~Vl~eI~~~lk~gaiLi 209 (417)
+ .++... .|+.|+-|.
T Consensus 79 h~~~~~~~a~~---al~aGkhVl 98 (372)
T 4gmf_A 79 AGGAGTQLARH---FLARGVHVI 98 (372)
T ss_dssp TTSHHHHHHHH---HHHTTCEEE
T ss_pred cchhHHHHHHH---HHHcCCcEE
Confidence 6 344433 344566443
No 247
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.30 E-value=0.00013 Score=68.61 Aligned_cols=80 Identities=13% Similarity=0.285 Sum_probs=51.7
Q ss_pred CEEEEEcccchHHHHHHH--HHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc
Q 014834 112 NQIGVIGWGSQGPAQAQN--LRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~--Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~ 189 (417)
++|+|||+|++|.++++. .... |++++...+.+...... .-.|+.+. ...++++++++.|+|++++|+.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~------g~~iVg~~D~dp~k~g~-~i~gv~V~--~~~dl~eli~~~D~ViIAvPs~ 156 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNN------NTKISMAFDINESKIGT-EVGGVPVY--NLDDLEQHVKDESVAILTVPAV 156 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------------CCEEEEEESCTTTTTC-EETTEEEE--EGGGHHHHCSSCCEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccC------CcEEEEEEeCCHHHHHh-HhcCCeee--chhhHHHHHHhCCEEEEecCch
Confidence 689999999999999994 3334 77766555544332211 11343321 1457888887779999999998
Q ss_pred hHHHHHHHHHh
Q 014834 190 AQADNYEKIFS 200 (417)
Q Consensus 190 ~~~~Vl~eI~~ 200 (417)
.+.++.+.+..
T Consensus 157 ~~~ei~~~l~~ 167 (215)
T 2vt3_A 157 AAQSITDRLVA 167 (215)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 88888877654
No 248
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.30 E-value=0.0003 Score=71.85 Aligned_cols=82 Identities=13% Similarity=0.143 Sum_probs=59.1
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEE
Q 014834 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViL 184 (417)
.||||||+ |.||..++.+|++. ..+++++ |.++..++..+.+++.|+.. .....+.+|+++ +.|+|++
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~a~~~g~~~-~~~~~~~~~ll~~~~vD~V~i 95 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQL----SSQFQITALYSPKIETSIATIQRLKLSN-ATAFPTLESFASSSTIDMIVI 95 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHT----TTTEEEEEEECSSHHHHHHHHHHTTCTT-CEEESSHHHHHHCSSCSEEEE
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhc----CCCeEEEEEEeCCHHHHHHHHHHcCCCc-ceeeCCHHHHhcCCCCCEEEE
Confidence 58999999 99999999999863 0156654 44554444456667777640 001578999886 6899999
Q ss_pred ccCCchHHHHHHHH
Q 014834 185 LISDAAQADNYEKI 198 (417)
Q Consensus 185 avpd~~~~~Vl~eI 198 (417)
++|+..+.++....
T Consensus 96 ~tp~~~H~~~~~~a 109 (438)
T 3btv_A 96 AIQVASHYEVVMPL 109 (438)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred eCCcHHHHHHHHHH
Confidence 99999998877653
No 249
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.28 E-value=0.0012 Score=65.17 Aligned_cols=67 Identities=18% Similarity=0.153 Sum_probs=46.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHH--c-------CceecCCCcCCHHhhcCcCCE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA--A-------GFTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~--~-------G~~~~~~~~~s~~Ea~~~ADI 181 (417)
+||+|||.|.||.++|..|... |+ +|.+.+....+....+.+ . .... ...+..+++++||+
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~------~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v---~~t~d~~a~~~aDv 76 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK------QLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKV---RGTNDYKDLENSDV 76 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCE---EEESCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEE---EEcCCHHHHCCCCE
Confidence 8999999999999999999988 76 887777665433222211 1 1111 01123578999999
Q ss_pred EEEccC
Q 014834 182 VLLLIS 187 (417)
Q Consensus 182 ViLavp 187 (417)
||++..
T Consensus 77 VIi~ag 82 (321)
T 3p7m_A 77 VIVTAG 82 (321)
T ss_dssp EEECCS
T ss_pred EEEcCC
Confidence 999964
No 250
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.26 E-value=0.00045 Score=67.60 Aligned_cols=79 Identities=10% Similarity=0.062 Sum_probs=54.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCC-hhh---HHHHHHcCceecCCCcCCHHhhcCc--CCEEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKG-SRS---FAEARAAGFTEENGTLGDIYETISG--SDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViV-g~r~~-s~s---~~~A~~~G~~~~~~~~~s~~Ea~~~--ADIViL 184 (417)
.||||||+|.+|..++..| .. +++++. .++.. .+. .+.+.+.|+.. ....|.+|++++ .|+|++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~------~~~lvav~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~~vD~V~I 73 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DE------ECSITGIAPGVPEEDLSKLEKAISEMNIKP--KKYNNWWEMLEKEKPDILVI 73 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CT------TEEEEEEECSSTTCCCHHHHHHHHTTTCCC--EECSSHHHHHHHHCCSEEEE
T ss_pred eEEEEEccchhHHHHHHhc-CC------CcEEEEEecCCchhhHHHHHHHHHHcCCCC--cccCCHHHHhcCCCCCEEEE
Confidence 6999999999999888777 44 677653 34332 122 22333446521 126789998864 899999
Q ss_pred ccCCchHHHHHHHHH
Q 014834 185 LISDAAQADNYEKIF 199 (417)
Q Consensus 185 avpd~~~~~Vl~eI~ 199 (417)
++|+..+.++.....
T Consensus 74 ~tp~~~H~~~~~~al 88 (337)
T 3ip3_A 74 NTVFSLNGKILLEAL 88 (337)
T ss_dssp CSSHHHHHHHHHHHH
T ss_pred eCCcchHHHHHHHHH
Confidence 999999988776543
No 251
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.24 E-value=0.00037 Score=67.72 Aligned_cols=77 Identities=19% Similarity=0.089 Sum_probs=57.1
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcC-----ceecCCCcCCHHhhcCcCC
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG-----FTEENGTLGDIYETISGSD 180 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G-----~~~~~~~~~s~~Ea~~~AD 180 (417)
.++| +++.|+|.|-+|.+++..|.+. |. +|.|.+|+.++..+.+.+.+ +....-...+..+.++++|
T Consensus 124 ~l~~-k~vlVlGaGG~g~aia~~L~~~------G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~D 196 (283)
T 3jyo_A 124 NAKL-DSVVQVGAGGVGNAVAYALVTH------GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAAD 196 (283)
T ss_dssp TCCC-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSS
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCC
Confidence 4678 9999999999999999999998 98 79999988666555554432 1110000236778888999
Q ss_pred EEEEccCCch
Q 014834 181 LVLLLISDAA 190 (417)
Q Consensus 181 IViLavpd~~ 190 (417)
+||.+||...
T Consensus 197 iVInaTp~Gm 206 (283)
T 3jyo_A 197 GVVNATPMGM 206 (283)
T ss_dssp EEEECSSTTS
T ss_pred EEEECCCCCC
Confidence 9999999644
No 252
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.22 E-value=0.00028 Score=68.18 Aligned_cols=83 Identities=12% Similarity=0.197 Sum_probs=55.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
.||||||+|.||..++.+|.... ...+++++ +.+++. .+.+.|+. ..+.+|+++ +.|+|++++|+
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~--~~~~~~lvav~d~~~-----~a~~~g~~-----~~~~~ell~~~~vD~V~i~tp~ 75 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPR--SAAFLNLIGFVSRRE-----LGSLDEVR-----QISLEDALRSQEIDVAYICSES 75 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHH--HHTTEEEEEEECSSC-----CCEETTEE-----BCCHHHHHHCSSEEEEEECSCG
T ss_pred ceEEEEEEcHHHHHHHHHHhccc--cCCCEEEEEEECchH-----HHHHcCCC-----CCCHHHHhcCCCCCEEEEeCCc
Confidence 58999999999999999987520 00145544 333321 12334554 368899886 68999999999
Q ss_pred chHHHHHHHHHhcCCCCc-EEE
Q 014834 189 AAQADNYEKIFSCMKPNS-ILG 209 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~ga-iLi 209 (417)
..+.++..... +.|+ +++
T Consensus 76 ~~H~~~~~~al---~aGkhVl~ 94 (294)
T 1lc0_A 76 SSHEDYIRQFL---QAGKHVLV 94 (294)
T ss_dssp GGHHHHHHHHH---HTTCEEEE
T ss_pred HhHHHHHHHHH---HCCCcEEE
Confidence 99987776543 3466 444
No 253
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.22 E-value=0.00011 Score=73.04 Aligned_cols=96 Identities=13% Similarity=0.078 Sum_probs=65.6
Q ss_pred hccCCCEEEEEcccch-HHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCC----c--CCHHhhcCcC
Q 014834 107 AFNGINQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT----L--GDIYETISGS 179 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~m-G~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~----~--~s~~Ea~~~A 179 (417)
.++| +++.|||.|.| |..+|+.|... |..|.+.+|+..+.++.+.+.+......+ + .++++.+++|
T Consensus 174 ~l~g-k~vvVIG~G~iVG~~~A~~L~~~------gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~A 246 (320)
T 1edz_A 174 RLYG-KKCIVINRSEIVGRPLAALLAND------GATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDS 246 (320)
T ss_dssp TTTT-CEEEEECCCTTTHHHHHHHHHTT------SCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHC
T ss_pred CCCC-CEEEEECCCcchHHHHHHHHHHC------CCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccC
Confidence 6788 99999999976 99999999988 88998887764333333333332110000 1 3578899999
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
|+||.+++-... ++. ...+++|.+|++.+-
T Consensus 247 DIVIsAtg~p~~--vI~--~e~vk~GavVIDVgi 276 (320)
T 1edz_A 247 DVVITGVPSENY--KFP--TEYIKEGAVCINFAC 276 (320)
T ss_dssp SEEEECCCCTTC--CBC--TTTSCTTEEEEECSS
T ss_pred CEEEECCCCCcc--eeC--HHHcCCCeEEEEcCC
Confidence 999999985321 011 234689988887753
No 254
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.22 E-value=0.00023 Score=69.40 Aligned_cols=71 Identities=15% Similarity=0.148 Sum_probs=52.8
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
.++| +++.|||.|-+|.+++..|.+. |. +|.|.+|+.++..+.+.+.+... ..+..+ + ++|+||.+
T Consensus 119 ~~~~-k~vlvlGaGGaaraia~~L~~~------G~~~v~v~nRt~~ka~~La~~~~~~~----~~~l~~-l-~~DivIna 185 (282)
T 3fbt_A 119 EIKN-NICVVLGSGGAARAVLQYLKDN------FAKDIYVVTRNPEKTSEIYGEFKVIS----YDELSN-L-KGDVIINC 185 (282)
T ss_dssp CCTT-SEEEEECSSTTHHHHHHHHHHT------TCSEEEEEESCHHHHHHHCTTSEEEE----HHHHTT-C-CCSEEEEC
T ss_pred CccC-CEEEEECCcHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHhcCccc----HHHHHh-c-cCCEEEEC
Confidence 3578 9999999999999999999998 98 89999987655545544332221 223344 4 89999999
Q ss_pred cCCch
Q 014834 186 ISDAA 190 (417)
Q Consensus 186 vpd~~ 190 (417)
||...
T Consensus 186 Tp~Gm 190 (282)
T 3fbt_A 186 TPKGM 190 (282)
T ss_dssp SSTTS
T ss_pred CccCc
Confidence 98643
No 255
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.21 E-value=0.0006 Score=67.71 Aligned_cols=77 Identities=16% Similarity=0.203 Sum_probs=53.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcC---CHHhhcCcCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG---DIYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~---s~~Ea~~~ADIViLavpd 188 (417)
|||.|||+|.+|..++..|.+ ..+|.++++.. +..+.+.+..-.. .-.+. ++.++++++|+||.++|+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------~~~v~~~~~~~-~~~~~~~~~~~~~-~~d~~d~~~l~~~~~~~DvVi~~~p~ 87 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------EFDVYIGDVNN-ENLEKVKEFATPL-KVDASNFDKLVEVMKEFELVIGALPG 87 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEEESCH-HHHHHHTTTSEEE-ECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred cEEEEECCCHHHHHHHHHHhc-------CCCeEEEEcCH-HHHHHHhccCCcE-EEecCCHHHHHHHHhCCCEEEEecCC
Confidence 589999999999999999875 45788877753 3344443322111 00022 355778999999999999
Q ss_pred chHHHHHHH
Q 014834 189 AAQADNYEK 197 (417)
Q Consensus 189 ~~~~~Vl~e 197 (417)
.....+.+.
T Consensus 88 ~~~~~v~~~ 96 (365)
T 3abi_A 88 FLGFKSIKA 96 (365)
T ss_dssp GGHHHHHHH
T ss_pred cccchHHHH
Confidence 987777764
No 256
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.21 E-value=0.0011 Score=65.38 Aligned_cols=94 Identities=18% Similarity=0.149 Sum_probs=62.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEE-EecCChh-hHHHHHHcCceecCCCcCCHHhhc-----CcCCEEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSR-SFAEARAAGFTEENGTLGDIYETI-----SGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViV-g~r~~s~-s~~~A~~~G~~~~~~~~~s~~Ea~-----~~ADIViL 184 (417)
.||||||+|.+|..+++.|.+.. .+.+++. .++..++ ..+.+++.|+... ..+.++++ .+.|+|++
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~----~~~elvav~d~~~~~~~~~~a~~~g~~~~---~~~~e~ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNA----KYLEMGAMVGIDAASDGLARAQRMGVTTT---YAGVEGLIKLPEFADIDFVFD 77 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC----SSEEEEEEECSCTTCHHHHHHHHTTCCEE---SSHHHHHHHSGGGGGEEEEEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhC----cCeEEEEEEeCChhhhHHHHHHHcCCCcc---cCCHHHHHhccCCCCCcEEEE
Confidence 58999999999999999995520 1555543 4444333 3567778887521 23556664 45899999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
++|+..+.++....... ++|+.|++...
T Consensus 78 atp~~~h~~~a~~al~a-~~Gk~Vi~ekp 105 (312)
T 1nvm_B 78 ATSASAHVQNEALLRQA-KPGIRLIDLTP 105 (312)
T ss_dssp CSCHHHHHHHHHHHHHH-CTTCEEEECST
T ss_pred CCChHHHHHHHHHHHHh-CCCCEEEEcCc
Confidence 99988887776654332 24777765443
No 257
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=97.20 E-value=0.00064 Score=68.43 Aligned_cols=66 Identities=23% Similarity=0.237 Sum_probs=51.4
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC-cCCEEEEc
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLL 185 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~-~ADIViLa 185 (417)
.|+| |+|+|+|+|++|...|+.|+.. |.+|++.+....+ .+.+.+.|... .+.+++.. +||+++.|
T Consensus 172 ~L~G-ktV~I~G~GnVG~~~A~~l~~~------GakVvvsD~~~~~-~~~a~~~ga~~-----v~~~ell~~~~DIliP~ 238 (355)
T 1c1d_A 172 SLDG-LTVLVQGLGAVGGSLASLAAEA------GAQLLVADTDTER-VAHAVALGHTA-----VALEDVLSTPCDVFAPC 238 (355)
T ss_dssp CSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHH-HHHHHHTTCEE-----CCGGGGGGCCCSEEEEC
T ss_pred CCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEeCCccH-HHHHHhcCCEE-----eChHHhhcCccceecHh
Confidence 6899 9999999999999999999988 9998866554322 45566677653 36677776 89999854
No 258
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=97.19 E-value=0.0011 Score=65.89 Aligned_cols=70 Identities=21% Similarity=0.224 Sum_probs=45.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHH--HcCceec--C-CCcCCHHhhcCcCCEEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAGFTEE--N-GTLGDIYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~--~~G~~~~--~-~~~~s~~Ea~~~ADIViL 184 (417)
+||+|||.|.+|.++|..|... |+ +|.+.+....+....+. ..+.... + ....+..+++++||+||+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~------~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi 79 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ------GITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCI 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEE
Confidence 7999999999999999999998 76 77766664333222221 1221100 0 001233578999999999
Q ss_pred ccC
Q 014834 185 LIS 187 (417)
Q Consensus 185 avp 187 (417)
+..
T Consensus 80 ~ag 82 (326)
T 3pqe_A 80 CAG 82 (326)
T ss_dssp CCS
T ss_pred ecc
Confidence 864
No 259
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.18 E-value=0.0012 Score=65.79 Aligned_cols=69 Identities=25% Similarity=0.239 Sum_probs=44.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHH--cC--ceecCC--CcCCHHhhcCcCCEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG--FTEENG--TLGDIYETISGSDLVL 183 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~--~G--~~~~~~--~~~s~~Ea~~~ADIVi 183 (417)
+||+|||.|.||.++|..|... |+ +|.+.+....+....+.+ .+ +..... ...+.++ +++||+||
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~------g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVI 94 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK------DLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVV 94 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH------CCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEE
Confidence 8999999999999999999998 87 777666543322222211 11 110000 0235555 89999999
Q ss_pred EccC
Q 014834 184 LLIS 187 (417)
Q Consensus 184 Lavp 187 (417)
++..
T Consensus 95 itaG 98 (330)
T 3ldh_A 95 ITAG 98 (330)
T ss_dssp ECCS
T ss_pred EeCC
Confidence 9843
No 260
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.18 E-value=0.0014 Score=64.76 Aligned_cols=67 Identities=21% Similarity=0.190 Sum_probs=46.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHH-------c--CceecCCCcCCHHhhcCcCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA-------A--GFTEENGTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~-------~--G~~~~~~~~~s~~Ea~~~AD 180 (417)
|||+|||.|.||.++|..|... |+ ++.+.+....+....+.+ . .... ...+..+++++||
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v---~~~~~~~a~~~aD 71 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ------DVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRV---TGTNDYGPTEDSD 71 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEE---EEESSSGGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEE---EECCCHHHhCCCC
Confidence 5899999999999999999988 76 777776655433222211 1 1121 0124568899999
Q ss_pred EEEEccC
Q 014834 181 LVLLLIS 187 (417)
Q Consensus 181 IViLavp 187 (417)
+||++.+
T Consensus 72 vVii~ag 78 (314)
T 3nep_X 72 VCIITAG 78 (314)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999975
No 261
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.18 E-value=0.00059 Score=66.49 Aligned_cols=74 Identities=16% Similarity=0.208 Sum_probs=59.5
Q ss_pred ccCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEcc
Q 014834 108 FNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 108 l~gmkkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
++| +++.|||.|. +|.++|+.|... |..|++..++ ..++++.+++||+||.++
T Consensus 148 l~G-k~vvVvG~s~iVG~plA~lL~~~------gAtVtv~~~~-------------------t~~L~~~~~~ADIVI~Av 201 (276)
T 3ngx_A 148 YHE-NTVTIVNRSPVVGRPLSMMLLNR------NYTVSVCHSK-------------------TKDIGSMTRSSKIVVVAV 201 (276)
T ss_dssp CCS-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHHHSSEEEECS
T ss_pred cCC-CEEEEEcCChHHHHHHHHHHHHC------CCeEEEEeCC-------------------cccHHHhhccCCEEEECC
Confidence 899 9999999986 899999999998 9998887542 246889999999999999
Q ss_pred CCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 187 SDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+-.. +++ ..++|+|++|++.+
T Consensus 202 g~p~---~I~--~~~vk~GavVIDvg 222 (276)
T 3ngx_A 202 GRPG---FLN--REMVTPGSVVIDVG 222 (276)
T ss_dssp SCTT---CBC--GGGCCTTCEEEECC
T ss_pred CCCc---ccc--HhhccCCcEEEEec
Confidence 8522 222 24579999988765
No 262
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.16 E-value=0.0013 Score=64.43 Aligned_cols=89 Identities=25% Similarity=0.222 Sum_probs=55.8
Q ss_pred EEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHc---------CceecCCCcCCHHhhcCcCCEE
Q 014834 113 QIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAA---------GFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 113 kIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~---------G~~~~~~~~~s~~Ea~~~ADIV 182 (417)
||+|||.|+||.+++..|... ++ +|.+.+...++....+.+. ..... .+.+. +++++||+|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~------~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~--~t~d~-~a~~~aD~V 71 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR------GYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRIS--GSNSY-EDMRGSDIV 71 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH------TCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEE--EESCG-GGGTTCSEE
T ss_pred CEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEE--ECCCH-HHhCCCCEE
Confidence 799999999999999999887 76 5777766543332212211 21110 01455 789999999
Q ss_pred EEccCCch----------------HHHHHHHHHhcCCCCcEEEEe
Q 014834 183 LLLISDAA----------------QADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 183 iLavpd~~----------------~~~Vl~eI~~~lk~gaiLi~a 211 (417)
|++.+... ..++.++|.++ .|+..+++.
T Consensus 72 i~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~ 115 (308)
T 2d4a_B 72 LVTAGIGRKPGMTREQLLEANANTMADLAEKIKAY-AKDAIVVIT 115 (308)
T ss_dssp EECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred EEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEe
Confidence 99965432 23444455555 366655544
No 263
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.16 E-value=0.0019 Score=63.38 Aligned_cols=70 Identities=17% Similarity=0.189 Sum_probs=44.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHH--cCceec--C-CCcCCHHhhcCcCCEEEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGFTEE--N-GTLGDIYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~--~G~~~~--~-~~~~s~~Ea~~~ADIViL 184 (417)
+||+|||.|++|.+++..|... |+ +|.+.+....+....+.+ .+.... + ....+..+++++||+||+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~------~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi 80 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQ------SIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVI 80 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEE
Confidence 6999999999999999999887 75 666555443222222221 111000 0 001245778999999999
Q ss_pred ccC
Q 014834 185 LIS 187 (417)
Q Consensus 185 avp 187 (417)
+.+
T Consensus 81 ~ag 83 (317)
T 3d0o_A 81 CAG 83 (317)
T ss_dssp CCC
T ss_pred CCC
Confidence 975
No 264
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.13 E-value=0.00067 Score=65.53 Aligned_cols=70 Identities=16% Similarity=0.176 Sum_probs=55.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavp 187 (417)
.+ ++|.|||.|-||.+++..|.+. |. +|.|.+|+.++..+.+.+.+... ..+.. +.++|+||.+||
T Consensus 118 ~~-~~vlvlGaGgaarav~~~L~~~------G~~~i~v~nRt~~ka~~la~~~~~~~----~~~~~--~~~~DivInaTp 184 (271)
T 1npy_A 118 KN-AKVIVHGSGGMAKAVVAAFKNS------GFEKLKIYARNVKTGQYLAALYGYAY----INSLE--NQQADILVNVTS 184 (271)
T ss_dssp TT-SCEEEECSSTTHHHHHHHHHHT------TCCCEEEECSCHHHHHHHHHHHTCEE----ESCCT--TCCCSEEEECSS
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHcCCcc----chhhh--cccCCEEEECCC
Confidence 46 8999999999999999999998 87 79999998777677777766532 11222 468999999999
Q ss_pred CchH
Q 014834 188 DAAQ 191 (417)
Q Consensus 188 d~~~ 191 (417)
....
T Consensus 185 ~gm~ 188 (271)
T 1npy_A 185 IGMK 188 (271)
T ss_dssp TTCT
T ss_pred CCcc
Confidence 7653
No 265
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.12 E-value=0.00077 Score=69.83 Aligned_cols=72 Identities=18% Similarity=0.176 Sum_probs=48.4
Q ss_pred CEEEEEcccch--HHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc---------CceecCCCcCCHHhhcCcCC
Q 014834 112 NQIGVIGWGSQ--GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---------GFTEENGTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~m--G~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~---------G~~~~~~~~~s~~Ea~~~AD 180 (417)
+||+|||.|+| |.+++..|...- .-.| +|++++...++ .+..... .+.. +.|.+|++++||
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~--~~~g-eV~L~Di~~e~-le~~~~~~~~l~~~~~~I~~----TtD~~eAl~dAD 77 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDE--RMSG-TVALYDLDFEA-AQKNEVIGNHSGNGRWRYEA----VSTLKKALSAAD 77 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCS--SCCE-EEEEECSSHHH-HHHHHHHHTTSTTSCEEEEE----ESSHHHHHTTCS
T ss_pred CEEEEECCChhHhHHHHHHHHHhcc--ccCC-eEEEEeCCHHH-HHHHHHHHHHHhccCCeEEE----ECCHHHHhcCCC
Confidence 69999999998 578888887630 0015 78777665332 2222111 1222 468899999999
Q ss_pred EEEEccCCchH
Q 014834 181 LVLLLISDAAQ 191 (417)
Q Consensus 181 IViLavpd~~~ 191 (417)
+||+++++...
T Consensus 78 fVI~airvG~~ 88 (450)
T 3fef_A 78 IVIISILPGSL 88 (450)
T ss_dssp EEEECCCSSCH
T ss_pred EEEeccccCCc
Confidence 99999987543
No 266
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.11 E-value=0.00056 Score=66.97 Aligned_cols=76 Identities=14% Similarity=0.131 Sum_probs=60.1
Q ss_pred hhccCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEE
Q 014834 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViL 184 (417)
..++| +++.|||.|. +|.++|+.|... |..|.+..+. ..++++.+++||+||.
T Consensus 157 i~l~G-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 210 (285)
T 3l07_A 157 IKTEG-AYAVVVGASNVVGKPVSQLLLNA------KATVTTCHRF-------------------TTDLKSHTTKADILIV 210 (285)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHhcccCCEEEE
Confidence 45889 9999999987 699999999998 9888877542 1367889999999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+++-.. ++. ..++|||++|++.+
T Consensus 211 Avg~p~---~I~--~~~vk~GavVIDvg 233 (285)
T 3l07_A 211 AVGKPN---FIT--ADMVKEGAVVIDVG 233 (285)
T ss_dssp CCCCTT---CBC--GGGSCTTCEEEECC
T ss_pred CCCCCC---CCC--HHHcCCCcEEEEec
Confidence 998422 121 24579999988775
No 267
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.09 E-value=0.0027 Score=63.16 Aligned_cols=95 Identities=16% Similarity=0.129 Sum_probs=60.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEE-ecCChhhHHHHHHcCceecCC-------------CcCCHHhhc
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVG-LRKGSRSFAEARAAGFTEENG-------------TLGDIYETI 176 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg-~r~~s~s~~~A~~~G~~~~~~-------------~~~s~~Ea~ 176 (417)
|.||||||+|.||..+++.|.+. .+++++.. ++........+.+.|+....+ ...+.+++.
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~-----p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~ 75 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQ-----PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI 75 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH
T ss_pred CeEEEEEecCHHHHHHHHHHHcC-----CCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhh
Confidence 35899999999999999998865 14565433 333334445666656543100 011344555
Q ss_pred CcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 177 ~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
+++|+|+.|+|.....+..+... +.|..+++.++
T Consensus 76 ~~vDvV~~aTp~~~s~~~a~~~~---~aG~kvV~~sa 109 (340)
T 1b7g_O 76 KTSDIVVDTTPNGVGAQYKPIYL---QLQRNAIFQGG 109 (340)
T ss_dssp HHCSEEEECCSTTHHHHHHHHHH---HTTCEEEECTT
T ss_pred cCCCEEEECCCCchhHHHHHHHH---HcCCeEEEeCC
Confidence 68999999999988877765443 34655555444
No 268
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.08 E-value=0.0018 Score=63.78 Aligned_cols=68 Identities=16% Similarity=0.184 Sum_probs=46.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHH--cC------ceecCCCcCCHHhhcCcCCE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~--~G------~~~~~~~~~s~~Ea~~~ADI 181 (417)
+||+|||.|++|.+++..|... ++ ++.+.+....+....+.+ .. +.. ..+..+++++||+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v----~~~~~~a~~~aDv 75 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ------GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKI----YSGEYSDCKDADL 75 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEE----EECCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEE----EECCHHHhCCCCE
Confidence 6999999999999999999887 65 676666543333222322 11 111 1245678999999
Q ss_pred EEEccCCc
Q 014834 182 VLLLISDA 189 (417)
Q Consensus 182 ViLavpd~ 189 (417)
||++.+..
T Consensus 76 Vii~ag~~ 83 (318)
T 1ez4_A 76 VVITAGAP 83 (318)
T ss_dssp EEECCCC-
T ss_pred EEECCCCC
Confidence 99998643
No 269
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.08 E-value=0.00047 Score=68.78 Aligned_cols=98 Identities=11% Similarity=0.042 Sum_probs=66.4
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCce---ecCCCcCCHHhhcCcCCEEE
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFT---EENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~---~~~~~~~s~~Ea~~~ADIVi 183 (417)
.+++ ++|.|||.|.+|.+.++.++.. |.+|++.+++.++ .+.+.+.|.. ..+....+..+.++++|+||
T Consensus 164 ~l~~-~~VlViGaGgvG~~aa~~a~~~------Ga~V~v~dr~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 164 GVKP-GKVVILGGGVVGTEAAKMAVGL------GAQVQIFDINVER-LSYLETLFGSRVELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp TBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCHHH-HHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEE
Confidence 4777 9999999999999999999998 9888888876443 3444443321 00000123456778999999
Q ss_pred EccCCchH--HH-HHHHHHhcCCCCcEEEEec
Q 014834 184 LLISDAAQ--AD-NYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 184 Lavpd~~~--~~-Vl~eI~~~lk~gaiLi~a~ 212 (417)
.+++.... .. +.++..+.|+++.+|++.+
T Consensus 236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 99974331 11 1334557789999888664
No 270
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.05 E-value=0.00046 Score=64.78 Aligned_cols=109 Identities=17% Similarity=0.267 Sum_probs=69.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChh-hHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-SFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~-s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd 188 (417)
++|+|||+|++|.++++.+... ..|++++...+.++. ....+.-.|+.+. + ..++++.++ +.|++++|+|.
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~----~~g~~iVg~~D~dp~~kiG~~~i~GvpV~-~-~~dL~~~v~~~~Id~vIIAvPs 158 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHD----RNKMQISMAFDLDSNDLVGKTTEDGIPVY-G-ISTINDHLIDSDIETAILTVPS 158 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCT----TSSEEEEEEEECTTSTTTTCBCTTCCBEE-E-GGGHHHHC-CCSCCEEEECSCG
T ss_pred CEEEEECcCHHHHHHHHhhhcc----cCCeEEEEEEeCCchhccCceeECCeEEe-C-HHHHHHHHHHcCCCEEEEecCc
Confidence 6899999999999999874311 127777655555443 3222012466542 1 356778876 48999999999
Q ss_pred chHHHHHHHHHhc-CCCCcEEEEecCchhhhhhhcccCCCCCccEEEecc
Q 014834 189 AAQADNYEKIFSC-MKPNSILGLSHGFLLGHLQSIGLDFPKNIGVIAVCP 237 (417)
Q Consensus 189 ~~~~~Vl~eI~~~-lk~gaiLi~a~G~~i~~~~~~~i~~~~dv~VI~v~P 237 (417)
....++.+.+.+. + ..++-|++- .+.+|+++.|--+..
T Consensus 159 ~~aq~v~d~lv~~GI--k~I~nFap~---------~l~vp~~v~v~~vdl 197 (212)
T 3keo_A 159 TEAQEVADILVKAGI--KGILSFSPV---------HLTLPKDIIVQYVDL 197 (212)
T ss_dssp GGHHHHHHHHHHHTC--CEEEECSSS---------CCCCCTTSEEEECCH
T ss_pred hhHHHHHHHHHHcCC--CEEEEcCCc---------ccCCCCCcEEEEeCc
Confidence 8887888775543 3 225655552 246678777765554
No 271
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.05 E-value=0.00069 Score=66.75 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=59.3
Q ss_pred hhccCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHH--hhcCcCCEE
Q 014834 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY--ETISGSDLV 182 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~--Ea~~~ADIV 182 (417)
..++| +++.|||.|. +|.++|..|... |..|.+..+.. .+++ +.+++||+|
T Consensus 161 i~l~G-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~~~~T-------------------~~l~l~~~~~~ADIV 214 (300)
T 4a26_A 161 IEMAG-KRAVVLGRSNIVGAPVAALLMKE------NATVTIVHSGT-------------------STEDMIDYLRTADIV 214 (300)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTTS-------------------CHHHHHHHHHTCSEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHHC------CCeEEEEeCCC-------------------CCchhhhhhccCCEE
Confidence 45899 9999999987 799999999998 99998876531 1344 788999999
Q ss_pred EEccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 183 iLavpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
|.+++-.. +++ ..++|+|++|++.+
T Consensus 215 I~Avg~p~---~I~--~~~vk~GavVIDvg 239 (300)
T 4a26_A 215 IAAMGQPG---YVK--GEWIKEGAAVVDVG 239 (300)
T ss_dssp EECSCCTT---CBC--GGGSCTTCEEEECC
T ss_pred EECCCCCC---CCc--HHhcCCCcEEEEEe
Confidence 99999532 222 24579999998765
No 272
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.04 E-value=0.0021 Score=63.51 Aligned_cols=68 Identities=15% Similarity=0.148 Sum_probs=46.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHH--cC------ceecCCCcCCHHhhcCcCCE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~--~G------~~~~~~~~~s~~Ea~~~ADI 181 (417)
+||+|||.|++|.+++..|... ++ ++.+.+....+....+.+ .. +.. ..+..+++++||+
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~------~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i----~~~~~~a~~~aDv 79 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKI----YSAEYSDAKDADL 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEE----EECCGGGGGGCSE
T ss_pred CEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEE----EECCHHHhCCCCE
Confidence 6999999999999999999887 65 676666543333222322 22 111 1245678999999
Q ss_pred EEEccCCc
Q 014834 182 VLLLISDA 189 (417)
Q Consensus 182 ViLavpd~ 189 (417)
||++.+..
T Consensus 80 Vii~ag~~ 87 (326)
T 2zqz_A 80 VVITAGAP 87 (326)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 99997643
No 273
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.03 E-value=0.00066 Score=65.82 Aligned_cols=161 Identities=14% Similarity=0.112 Sum_probs=94.8
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCC-hhhH--HHHH----HcCceecCCCcCCHHhhcCcCCEE
Q 014834 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSF--AEAR----AAGFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 111 mkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~-s~s~--~~A~----~~G~~~~~~~~~s~~Ea~~~ADIV 182 (417)
|.||+|+| +|.||..+++.+.+. .+++++...+.. +... +... ..|+.. ..++++++.++|+|
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~-----~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v----~~dl~~ll~~~DVV 77 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA-----PDATLVGALDRTGSPQLGQDAGAFLGKQTGVAL----TDDIERVCAEADYL 77 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC-----TTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBC----BCCHHHHHHHCSEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEEecCcccccccHHHHhCCCCCcee----cCCHHHHhcCCCEE
Confidence 37999999 899999999998765 166665444432 2100 0000 114433 46889999999999
Q ss_pred EEccCCchHHHHHHHHHhcCCCCc-EEEEecCchhhhhhhcccCCCCCccEEEeccCCCchhHH--HHHhhcccccC--C
Q 014834 183 LLLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVR--RLYVQGKEING--A 257 (417)
Q Consensus 183 iLavpd~~~~~Vl~eI~~~lk~ga-iLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr--~ly~~G~~~~G--~ 257 (417)
|-+++|....+++..... .|. +|+=+.|++-..++. .....+.+. +...||.+--+.- .+-+.-....+ .
T Consensus 78 IDfT~p~a~~~~~~~al~---~G~~vVigTTG~s~~~~~~-L~~aa~~~~-vv~a~N~s~Gv~l~~~~~~~aa~~l~~~~ 152 (272)
T 4f3y_A 78 IDFTLPEGTLVHLDAALR---HDVKLVIGTTGFSEPQKAQ-LRAAGEKIA-LVFSANMSVGVNVTMKLLEFAAKQFAQGY 152 (272)
T ss_dssp EECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHHHH-HHHHTTTSE-EEECSCCCHHHHHHHHHHHHHHHHTSSSC
T ss_pred EEcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHHHH-HHHHhccCC-EEEECCCCHHHHHHHHHHHHHHHhcCcCC
Confidence 999999888777765443 344 444467886443221 112234455 4788988765411 11000001111 2
Q ss_pred CceEEEeecC----C-CCHHHHHHHHHHHHHhCC
Q 014834 258 GINSSFAVHQ----D-VDGRATNVALGWSVALGS 286 (417)
Q Consensus 258 Gv~~liav~~----d-vsgea~e~a~~L~~alG~ 286 (417)
-+-. +-.|. | +||.|+.++..+....|.
T Consensus 153 diei-~E~HH~~K~DaPSGTA~~la~~i~~~~~~ 185 (272)
T 4f3y_A 153 DIEI-IEAHHRHKVDAPSGTALMMGETIAAATGR 185 (272)
T ss_dssp EEEE-EEEECTTCCSSSCHHHHHHHHHHHHTTTC
T ss_pred CEEE-EEecCCCCCCCCCHHHHHHHHHHHHHhCc
Confidence 2333 33333 2 589999999999888775
No 274
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=97.02 E-value=0.0012 Score=64.55 Aligned_cols=76 Identities=18% Similarity=0.132 Sum_probs=60.2
Q ss_pred hhccCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEE
Q 014834 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViL 184 (417)
..++| +++.|||.|. .|.++|..|... |..|.+..+. ..++++.+++||+||.
T Consensus 156 i~l~G-k~vvVvGrs~iVG~p~A~lL~~~------gAtVtv~h~~-------------------t~~L~~~~~~ADIVI~ 209 (285)
T 3p2o_A 156 IDLEG-KDAVIIGASNIVGRPMATMLLNA------GATVSVCHIK-------------------TKDLSLYTRQADLIIV 209 (285)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHHhhcCCEEEE
Confidence 46889 9999999987 699999999998 9888877542 2367889999999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+++-.. ++. ..++|||++|++.+
T Consensus 210 Avg~p~---~I~--~~~vk~GavVIDVg 232 (285)
T 3p2o_A 210 AAGCVN---LLR--SDMVKEGVIVVDVG 232 (285)
T ss_dssp CSSCTT---CBC--GGGSCTTEEEEECC
T ss_pred CCCCCC---cCC--HHHcCCCeEEEEec
Confidence 998422 121 25579999988775
No 275
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.97 E-value=0.0022 Score=63.29 Aligned_cols=66 Identities=20% Similarity=0.155 Sum_probs=44.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC--hhhHHHHHH---------cCceecCCCcCCHHhhcCcC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG--SRSFAEARA---------AGFTEENGTLGDIYETISGS 179 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~--s~s~~~A~~---------~G~~~~~~~~~s~~Ea~~~A 179 (417)
+||+|||.|.||.++|..|... |+ +|.+.++.. .+....+.+ ..... ...+..+++++|
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~------g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i---~~t~d~~a~~~a 79 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK------ELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANI---IGTSDYADTADS 79 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCE---EEESCGGGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEE---EEcCCHHHhCCC
Confidence 7999999999999999999998 88 887776652 211111111 01111 012235788999
Q ss_pred CEEEEcc
Q 014834 180 DLVLLLI 186 (417)
Q Consensus 180 DIViLav 186 (417)
|+||++.
T Consensus 80 DvVIiaa 86 (315)
T 3tl2_A 80 DVVVITA 86 (315)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 9999996
No 276
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.96 E-value=0.0012 Score=64.84 Aligned_cols=80 Identities=10% Similarity=0.122 Sum_probs=56.8
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCc---CCEEEEccC
Q 014834 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG---SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~---ADIViLavp 187 (417)
.||||||+|.||. .++..|+.. .+++|+...+.+.. +.|+.. ..+.+|++++ .|+|++++|
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~-----~~~~lvav~d~~~~------~~g~~~----~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKN-----ANFKLVATASRHGT------VEGVNS----YTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHC-----TTEEEEEEECSSCC------CTTSEE----ESSHHHHHHHCTTCCEEEECSC
T ss_pred ceEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEEeCChh------hcCCCc----cCCHHHHHhCCCCCCEEEEeCC
Confidence 4899999999998 789988875 15565433333222 257764 6789998765 899999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEE
Q 014834 188 DAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi 209 (417)
+..+.++..... +.|+-|.
T Consensus 91 ~~~H~~~~~~al---~aGkhVl 109 (330)
T 4ew6_A 91 PQYRYEAAYKAL---VAGKHVF 109 (330)
T ss_dssp HHHHHHHHHHHH---HTTCEEE
T ss_pred cHHHHHHHHHHH---HcCCcEE
Confidence 999988776543 3455433
No 277
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.92 E-value=0.0017 Score=66.80 Aligned_cols=78 Identities=21% Similarity=0.150 Sum_probs=52.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC-ceecCCCcC---CHHhhcCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLG---DIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G-~~~~~~~~~---s~~Ea~~~ADIViLavp 187 (417)
++|.|||.|.+|.+++..|.+. |.+|++.+|+.++..+.+.+.+ +......+. +..++++++|+||.++|
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~------G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~ 77 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDS------GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP 77 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTT------TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------cCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence 8999999999999999999988 8898888886444333332222 211000122 34467889999999999
Q ss_pred CchHHHHH
Q 014834 188 DAAQADNY 195 (417)
Q Consensus 188 d~~~~~Vl 195 (417)
...+..+.
T Consensus 78 ~~~~~~i~ 85 (450)
T 1ff9_A 78 YTFHATVI 85 (450)
T ss_dssp --CHHHHH
T ss_pred cccchHHH
Confidence 87665543
No 278
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.92 E-value=0.0033 Score=62.44 Aligned_cols=96 Identities=16% Similarity=0.197 Sum_probs=59.8
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEE-ecCChhhHHHHHHcCceec------------CCC--cCCHHhh
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVG-LRKGSRSFAEARAAGFTEE------------NGT--LGDIYET 175 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg-~r~~s~s~~~A~~~G~~~~------------~~~--~~s~~Ea 175 (417)
|.||||||+|.+|.-+++.|.+. .+++++.. .+....+...+...|+... .+. ..+.+++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-----~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~ 75 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-----DDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM 75 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-----SSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-----CCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHH
Confidence 46899999999999999998863 15565433 3332333344444331110 000 1245666
Q ss_pred cCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 176 ~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
..++|+||.|+|.....+..+... +.|+.|++.++-
T Consensus 76 ~~~vDvV~~atp~~~~~~~a~~~l---~aG~~VId~sp~ 111 (337)
T 1cf2_P 76 LDEADIVIDCTPEGIGAKNLKMYK---EKGIKAIFQGGE 111 (337)
T ss_dssp HHTCSEEEECCSTTHHHHHHHHHH---HHTCCEEECTTS
T ss_pred hcCCCEEEECCCchhhHHHHHHHH---HcCCEEEEecCC
Confidence 778999999999998877776543 335556666553
No 279
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.91 E-value=0.002 Score=63.14 Aligned_cols=67 Identities=21% Similarity=0.197 Sum_probs=45.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHHc--C------ceecCCCcCCHHhhcCcCCE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA--G------FTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~~--G------~~~~~~~~~s~~Ea~~~ADI 181 (417)
+||+|||.|++|.+++..|... ++ ++.+.+...++....+.+. . +.. ..+..+++++||+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v----~~~~~~a~~~aD~ 70 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL------GVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWV----WAGSYGDLEGARA 70 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEE----EECCGGGGTTEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEE----EECCHHHhCCCCE
Confidence 5899999999999999999887 53 6766665533332223321 1 121 1133678999999
Q ss_pred EEEccCC
Q 014834 182 VLLLISD 188 (417)
Q Consensus 182 ViLavpd 188 (417)
||++.+.
T Consensus 71 Vii~ag~ 77 (310)
T 2xxj_A 71 VVLAAGV 77 (310)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998753
No 280
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.0018 Score=67.26 Aligned_cols=85 Identities=19% Similarity=0.227 Sum_probs=56.4
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcC---CHHhhcCcCCEE
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG---DIYETISGSDLV 182 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~---s~~Ea~~~ADIV 182 (417)
..+++ ++|.|||+|.+|.+++..|.+. .|.+|.+.+|+.++..+.+...++......+. +..++++++|+|
T Consensus 19 ~~l~~-k~VlIiGAGgiG~aia~~L~~~-----~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvV 92 (467)
T 2axq_A 19 GRHMG-KNVLLLGSGFVAQPVIDTLAAN-----DDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVV 92 (467)
T ss_dssp ----C-EEEEEECCSTTHHHHHHHHHTS-----TTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred cCCCC-CEEEEECChHHHHHHHHHHHhC-----CCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEE
Confidence 45666 8999999999999999999875 14688888887555444444334321000122 345677899999
Q ss_pred EEccCCchHHHHHH
Q 014834 183 LLLISDAAQADNYE 196 (417)
Q Consensus 183 iLavpd~~~~~Vl~ 196 (417)
|.++|+..+..+..
T Consensus 93 In~tp~~~~~~v~~ 106 (467)
T 2axq_A 93 ISLIPYTFHPNVVK 106 (467)
T ss_dssp EECSCGGGHHHHHH
T ss_pred EECCchhhhHHHHH
Confidence 99999876655543
No 281
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.89 E-value=0.0036 Score=62.15 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=45.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHH--c------CceecCCCcCCHHhhcCcCCE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--A------GFTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~--~------G~~~~~~~~~s~~Ea~~~ADI 181 (417)
+||+|||.|.+|.++|..|... |+ ++.+.+....+....+.+ . .+.. ..+..+++++||+
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i----~~~~~~a~~~aDi 79 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKI----YSAEYSDAKDADL 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEE----EECCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEE----EECcHHHhcCCCE
Confidence 8999999999999999999988 77 777666643332222221 1 1121 2234678999999
Q ss_pred EEEccC
Q 014834 182 VLLLIS 187 (417)
Q Consensus 182 ViLavp 187 (417)
||++..
T Consensus 80 Vvi~ag 85 (326)
T 3vku_A 80 VVITAG 85 (326)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999864
No 282
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.88 E-value=0.0012 Score=66.86 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=55.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCC---cEEEEEecCChhhHHHHHHcC------ceecCCCc---CCHHhhcCc
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD---IVVKVGLRKGSRSFAEARAAG------FTEENGTL---GDIYETISG 178 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G---~~ViVg~r~~s~s~~~A~~~G------~~~~~~~~---~s~~Ea~~~ 178 (417)
|+||+|||+|.+|.++++.|.+. | .+|.+.+|+.++..+.+.+.+ +......+ .++++++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~------g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~ 74 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN------REVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE 74 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC------TTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh
Confidence 68999999999999999999987 6 378888887555544444321 21100001 234566776
Q ss_pred --CCEEEEccCCchHHHHHHH
Q 014834 179 --SDLVLLLISDAAQADNYEK 197 (417)
Q Consensus 179 --ADIViLavpd~~~~~Vl~e 197 (417)
+|+||.++|+.....+.+.
T Consensus 75 ~~~DvVin~ag~~~~~~v~~a 95 (405)
T 4ina_A 75 VKPQIVLNIALPYQDLTIMEA 95 (405)
T ss_dssp HCCSEEEECSCGGGHHHHHHH
T ss_pred hCCCEEEECCCcccChHHHHH
Confidence 8999999998876666654
No 283
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.87 E-value=0.0017 Score=63.52 Aligned_cols=76 Identities=21% Similarity=0.171 Sum_probs=59.8
Q ss_pred hhccCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEE
Q 014834 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViL 184 (417)
..++| +++.|||.|. .|.++|.-|... |..|.+..+. +.++++.+++||+||.
T Consensus 157 i~l~G-k~vvVvGrs~iVG~plA~lL~~~------gAtVtv~hs~-------------------T~~L~~~~~~ADIVI~ 210 (286)
T 4a5o_A 157 ADLYG-MDAVVVGASNIVGRPMALELLLG------GCTVTVTHRF-------------------TRDLADHVSRADLVVV 210 (286)
T ss_dssp CCCTT-CEEEEECTTSTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHHTCSEEEE
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHC------CCeEEEEeCC-------------------CcCHHHHhccCCEEEE
Confidence 45889 9999999987 799999999998 8888877532 1367888999999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+++-.. ++. ..++|||++|++.+
T Consensus 211 Avg~p~---~I~--~~~vk~GavVIDvg 233 (286)
T 4a5o_A 211 AAGKPG---LVK--GEWIKEGAIVIDVG 233 (286)
T ss_dssp CCCCTT---CBC--GGGSCTTCEEEECC
T ss_pred CCCCCC---CCC--HHHcCCCeEEEEec
Confidence 998422 221 24579999998765
No 284
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.84 E-value=0.002 Score=63.68 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=54.7
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecC---ChhhHHHHHHc----CceecCCCcCC---HHhh
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK---GSRSFAEARAA----GFTEENGTLGD---IYET 175 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~---~s~s~~~A~~~----G~~~~~~~~~s---~~Ea 175 (417)
.++| +++.|+|.|-+|.+++..|.+. |. +|.|.+|+ .++..+.+.+. +....-....+ ..+.
T Consensus 151 ~l~g-k~~lVlGaGG~g~aia~~L~~~------Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (315)
T 3tnl_A 151 DIIG-KKMTICGAGGAATAICIQAALD------GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKE 223 (315)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred CccC-CEEEEECCChHHHHHHHHHHHC------CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhh
Confidence 4678 9999999999999999999998 98 89999997 44444444332 22110000222 3456
Q ss_pred cCcCCEEEEccCCchH
Q 014834 176 ISGSDLVLLLISDAAQ 191 (417)
Q Consensus 176 ~~~ADIViLavpd~~~ 191 (417)
+.++|+||.+||....
T Consensus 224 l~~aDiIINaTp~Gm~ 239 (315)
T 3tnl_A 224 IAESVIFTNATGVGMK 239 (315)
T ss_dssp HHTCSEEEECSSTTST
T ss_pred hcCCCEEEECccCCCC
Confidence 7899999999996543
No 285
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.83 E-value=0.0016 Score=64.22 Aligned_cols=77 Identities=18% Similarity=0.164 Sum_probs=54.7
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecC---ChhhHHHHHHc----CceecCCCcCCH---Hhh
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK---GSRSFAEARAA----GFTEENGTLGDI---YET 175 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~---~s~s~~~A~~~----G~~~~~~~~~s~---~Ea 175 (417)
.++| +++.|||.|-+|.+++..|.+. |. +|.|.+|+ .++..+.+.+. +....-....+. .+.
T Consensus 145 ~l~g-k~~lVlGAGGaaraia~~L~~~------G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~ 217 (312)
T 3t4e_A 145 DMRG-KTMVLLGAGGAATAIGAQAAIE------GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEA 217 (312)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred CcCC-CEEEEECcCHHHHHHHHHHHHc------CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhh
Confidence 4678 9999999999999999999998 98 89999998 44444444432 221100002233 556
Q ss_pred cCcCCEEEEccCCch
Q 014834 176 ISGSDLVLLLISDAA 190 (417)
Q Consensus 176 ~~~ADIViLavpd~~ 190 (417)
+.++|+||.+||...
T Consensus 218 l~~~DiIINaTp~Gm 232 (312)
T 3t4e_A 218 LASADILTNGTKVGM 232 (312)
T ss_dssp HHHCSEEEECSSTTS
T ss_pred ccCceEEEECCcCCC
Confidence 788999999999754
No 286
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.81 E-value=0.0013 Score=64.37 Aligned_cols=161 Identities=15% Similarity=0.056 Sum_probs=94.4
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhh---HHHHH-----HcCceecCCCcCCHHhhcCcCCE
Q 014834 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS---FAEAR-----AAGFTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 111 mkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s---~~~A~-----~~G~~~~~~~~~s~~Ea~~~ADI 181 (417)
+.||+|+| +|.||..+++.+.+. .+++++...+..... .+... ..|+.. ..++++++.++|+
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~-----~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v----~~dl~~ll~~aDV 91 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRR-----KDVELCAVLVRKGSSFVDKDASILIGSDFLGVRI----TDDPESAFSNTEG 91 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTC-----SSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBC----BSCHHHHTTSCSE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCCccccccchHHhhccCcCCcee----eCCHHHHhcCCCE
Confidence 36899999 999999999998764 166765444432111 00111 234443 5689999999999
Q ss_pred EEEccCCchHHHHHHHHHhcCCCCc-EEEEecCchhhhhhhcccCCCCCccEEEeccCCCchhHH--HHHhhcccccC--
Q 014834 182 VLLLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVR--RLYVQGKEING-- 256 (417)
Q Consensus 182 ViLavpd~~~~~Vl~eI~~~lk~ga-iLi~a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr--~ly~~G~~~~G-- 256 (417)
||-.++|....+.+..... .|. +|+=+.|++-...+. ....-+.+. +...||.+--+.- .+-+.--...+
T Consensus 92 vIDFT~p~a~~~~~~~~l~---~Gv~vViGTTG~~~e~~~~-L~~aa~~~~-~~~a~N~SiGv~ll~~l~~~aa~~l~~~ 166 (288)
T 3ijp_A 92 ILDFSQPQASVLYANYAAQ---KSLIHIIGTTGFSKTEEAQ-IADFAKYTT-IVKSGNMSLGVNLLANLVKRAAKALDDD 166 (288)
T ss_dssp EEECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHHHH-HHHHHTTSE-EEECSCCCHHHHHHHHHHHHHHHHSCTT
T ss_pred EEEcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHHHH-HHHHhCcCC-EEEECCCcHHHHHHHHHHHHHHHhcCCC
Confidence 9999998877666655433 344 444467885432211 111123444 4788998765421 11111000111
Q ss_pred CCceEEEeecC----C-CCHHHHHHHHHHHHHhCC
Q 014834 257 AGINSSFAVHQ----D-VDGRATNVALGWSVALGS 286 (417)
Q Consensus 257 ~Gv~~liav~~----d-vsgea~e~a~~L~~alG~ 286 (417)
.-+-. +-.|. | +||.|+.++..+....|.
T Consensus 167 ~dieI-iE~HH~~K~DaPSGTA~~la~~i~~~~~~ 200 (288)
T 3ijp_A 167 FDIEI-YEMHHANKVDSPSGTALLLGQAAAEGRNI 200 (288)
T ss_dssp SEEEE-EEEECTTCCCSSCHHHHHHHHHHHHHTTS
T ss_pred CCEEE-EEccCCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 22322 33333 2 679999999999888875
No 287
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.79 E-value=0.0027 Score=62.52 Aligned_cols=76 Identities=16% Similarity=0.179 Sum_probs=60.1
Q ss_pred hhccCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEE
Q 014834 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViL 184 (417)
..++| +++.|||.|+ .|..+|+-|... |..|.+..+. ..++.+.+++||+||.
T Consensus 161 i~l~g-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 214 (301)
T 1a4i_A 161 VPIAG-RHAVVVGRSKIVGAPMHDLLLWN------NATVTTCHSK-------------------TAHLDEEVNKGDILVV 214 (301)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHhC------CCeEEEEECC-------------------cccHHHHhccCCEEEE
Confidence 36789 9999999996 699999999998 8888877422 2478899999999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+++-... +. ..++|||++|++.+
T Consensus 215 Avg~p~~---I~--~~~vk~GavVIDVg 237 (301)
T 1a4i_A 215 ATGQPEM---VK--GEWIKPGAIVIDCG 237 (301)
T ss_dssp CCCCTTC---BC--GGGSCTTCEEEECC
T ss_pred CCCCccc---CC--HHHcCCCcEEEEcc
Confidence 9996332 21 23478999998765
No 288
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.76 E-value=0.0045 Score=61.53 Aligned_cols=71 Identities=23% Similarity=0.236 Sum_probs=45.8
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHH--cC--ceecCC--CcCCHHhhcCcC
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG--FTEENG--TLGDIYETISGS 179 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~--~G--~~~~~~--~~~s~~Ea~~~A 179 (417)
... +||+|||.|.||.++|..|... |+ ++.+.+....+....+.+ .. +..... ...+. +.+++|
T Consensus 17 ~~~-~kV~ViGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~a 88 (331)
T 4aj2_A 17 VPQ-NKITVVGVGAVGMACAISILMK------DLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANS 88 (331)
T ss_dssp CCS-SEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCC
Confidence 344 8999999999999999999888 76 777766653333222221 11 110000 02344 468999
Q ss_pred CEEEEcc
Q 014834 180 DLVLLLI 186 (417)
Q Consensus 180 DIViLav 186 (417)
|+||++.
T Consensus 89 DiVvi~a 95 (331)
T 4aj2_A 89 KLVIITA 95 (331)
T ss_dssp EEEEECC
T ss_pred CEEEEcc
Confidence 9999985
No 289
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.75 E-value=0.0021 Score=62.93 Aligned_cols=76 Identities=16% Similarity=0.104 Sum_probs=59.7
Q ss_pred hhccCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEE
Q 014834 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViL 184 (417)
..++| +++.|||.|+ .|..+|+-|... |..|.+..+. ..++.+.+++||+||.
T Consensus 155 i~l~g-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 208 (288)
T 1b0a_A 155 IDTFG-LNAVVIGASNIVGRPMSMELLLA------GCTTTVTHRF-------------------TKNLRHHVENADLLIV 208 (288)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHTT------TCEEEEECSS-------------------CSCHHHHHHHCSEEEE
T ss_pred CCCCC-CEEEEECCChHHHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHHhccCCEEEE
Confidence 46789 9999999997 599999999998 8888877432 2367889999999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+++-... +. ..++|||++|++.+
T Consensus 209 Avg~p~l---I~--~~~vk~GavVIDVg 231 (288)
T 1b0a_A 209 AVGKPGF---IP--GDWIKEGAIVIDVG 231 (288)
T ss_dssp CSCCTTC---BC--TTTSCTTCEEEECC
T ss_pred CCCCcCc---CC--HHHcCCCcEEEEcc
Confidence 9994431 21 23479999998765
No 290
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.71 E-value=0.0013 Score=63.36 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=53.3
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCc--------eecCCCcCCHHhhcCc
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF--------TEENGTLGDIYETISG 178 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~--------~~~~~~~~s~~Ea~~~ 178 (417)
.++| +++.|+|.|.+|.+++..|.+. | +|++.+|+.++..+.+.+.+. .. .+.+..+.+.+
T Consensus 125 ~l~~-k~vlV~GaGgiG~aia~~L~~~------G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~---d~~~~~~~~~~ 193 (287)
T 1nvt_A 125 RVKD-KNIVIYGAGGAARAVAFELAKD------N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEV---KFSGLDVDLDG 193 (287)
T ss_dssp CCCS-CEEEEECCSHHHHHHHHHHTSS------S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHE---EEECTTCCCTT
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHC------C-CEEEEECCHHHHHHHHHHHhhhcccccceeE---EEeeHHHhhCC
Confidence 4678 9999999999999999999998 9 999888875544444433211 10 01233566788
Q ss_pred CCEEEEccCCchH
Q 014834 179 SDLVLLLISDAAQ 191 (417)
Q Consensus 179 ADIViLavpd~~~ 191 (417)
+|+||.++|....
T Consensus 194 ~DilVn~ag~~~~ 206 (287)
T 1nvt_A 194 VDIIINATPIGMY 206 (287)
T ss_dssp CCEEEECSCTTCT
T ss_pred CCEEEECCCCCCC
Confidence 9999999986543
No 291
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.70 E-value=0.0083 Score=59.88 Aligned_cols=92 Identities=21% Similarity=0.143 Sum_probs=58.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCh-hhHHHHH--------------------HcCceecCCCcC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEAR--------------------AAGFTEENGTLG 170 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s-~s~~~A~--------------------~~G~~~~~~~~~ 170 (417)
.||||+|+|.+|..+++.|... .+++++..++... .....++ ..++.. ..
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~-----~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v----~~ 73 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQ-----DDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPV----EG 73 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-----SSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCC----CC
T ss_pred eEEEEECCCHHHHHHHHHHHhC-----CCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEE----CC
Confidence 5999999999999999998764 1456543332211 1111222 222222 12
Q ss_pred CHHhhcCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 171 DIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 171 s~~Ea~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+.++...++|+|+.|+|.....+..+ ..+++.|+.|+++++.
T Consensus 74 ~~~~~~~~vDiV~eatg~~~s~~~a~--~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 74 TILDIIEDADIVVDGAPKKIGKQNLE--NIYKPHKVKAILQGGE 115 (343)
T ss_dssp BGGGTGGGCSEEEECCCTTHHHHHHH--HTTTTTTCEEEECTTS
T ss_pred chHHhccCCCEEEECCCccccHHHHH--HHHHHCCCEEEECCCc
Confidence 34555678999999999877665554 4678888877776654
No 292
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.66 E-value=0.0047 Score=58.47 Aligned_cols=87 Identities=18% Similarity=0.203 Sum_probs=58.1
Q ss_pred hhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-------------------hhhHHHHHHc----
Q 014834 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFAEARAA---- 160 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~-------------------s~s~~~A~~~---- 160 (417)
+..|++ ++|.|||+|.+|..++++|... |+ ++.+.++.. .+....++..
T Consensus 26 q~~l~~-~~VlVvG~Gg~G~~va~~La~~------Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n 98 (249)
T 1jw9_B 26 QEALKD-SRVLIVGLGGLGCAASQYLASA------GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN 98 (249)
T ss_dssp HHHHHH-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred HHHHhC-CeEEEEeeCHHHHHHHHHHHHc------CCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC
Confidence 567888 9999999999999999999999 87 777766653 3333222221
Q ss_pred -Ccee--cCCCcC--CHHhhcCcCCEEEEccCCchHHHHHHHH
Q 014834 161 -GFTE--ENGTLG--DIYETISGSDLVLLLISDAAQADNYEKI 198 (417)
Q Consensus 161 -G~~~--~~~~~~--s~~Ea~~~ADIViLavpd~~~~~Vl~eI 198 (417)
++.. ...... +.++.++++|+||.++.+......+.+.
T Consensus 99 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~ 141 (249)
T 1jw9_B 99 PHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAG 141 (249)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHH
T ss_pred CCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHH
Confidence 2221 011111 2356788999999999876655555543
No 293
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.66 E-value=0.0039 Score=61.83 Aligned_cols=98 Identities=18% Similarity=0.196 Sum_probs=56.7
Q ss_pred CCCEEEEEcccchHHHHHHHHHhh---hhhhcCCcEEE-EEecCChhh----HH--HHHHcC-ceecCCCcC--CHHhhc
Q 014834 110 GINQIGVIGWGSQGPAQAQNLRDS---LAEAKSDIVVK-VGLRKGSRS----FA--EARAAG-FTEENGTLG--DIYETI 176 (417)
Q Consensus 110 gmkkIgIIG~G~mG~AiA~~Lr~s---~~~~~~G~~Vi-Vg~r~~s~s----~~--~A~~~G-~~~~~~~~~--s~~Ea~ 176 (417)
||.||||||+|.||..+++.|.+. +...+.+++|+ |.+++.... .. .+...+ ... .. +.++++
T Consensus 1 ~mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~----~~~~d~~~ll 76 (327)
T 3do5_A 1 GMIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGML----RDDAKAIEVV 76 (327)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSC----SBCCCHHHHH
T ss_pred CcEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccc----cCCCCHHHHh
Confidence 367999999999999999998764 11122356554 333332211 11 111111 111 23 788887
Q ss_pred C--cCCEEEEccCCchH-HHHHHHHHhcCCCCcEEEEe
Q 014834 177 S--GSDLVLLLISDAAQ-ADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 177 ~--~ADIViLavpd~~~-~~Vl~eI~~~lk~gaiLi~a 211 (417)
+ +.|+|+.++|+..+ .+.++-+...|+.|+-|+..
T Consensus 77 ~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~ 114 (327)
T 3do5_A 77 RSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTS 114 (327)
T ss_dssp HHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEEC
T ss_pred cCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEec
Confidence 5 58999999999875 22333345567778866644
No 294
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.65 E-value=0.0044 Score=64.10 Aligned_cols=86 Identities=21% Similarity=0.225 Sum_probs=56.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEecCChhhHHHHHHc-C----------------------ceecCC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAA-G----------------------FTEENG 167 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~-G----------------------~~~~~~ 167 (417)
.||||||+|.||..++..+.+. .++++. |.+++.++..+.+.+. | ...
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~-----~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v--- 95 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARM-----QGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAV--- 95 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-----SSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEE---
T ss_pred eEEEEECChHHHHHHHHHHhhC-----CCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceE---
Confidence 5899999999999999988754 155554 4455444444444443 5 112
Q ss_pred CcCCHHhhcC--cCCEEEEccCCc-hHHHHHHHHHhcCCCCcEEE
Q 014834 168 TLGDIYETIS--GSDLVLLLISDA-AQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 168 ~~~s~~Ea~~--~ADIViLavpd~-~~~~Vl~eI~~~lk~gaiLi 209 (417)
+.|.+++++ +.|+|++++|+. .+.++... .|+.|+-|+
T Consensus 96 -~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~---AL~AGKHVv 136 (446)
T 3upl_A 96 -TDDNDLILSNPLIDVIIDATGIPEVGAETGIA---AIRNGKHLV 136 (446)
T ss_dssp -ESCHHHHHTCTTCCEEEECSCCHHHHHHHHHH---HHHTTCEEE
T ss_pred -ECCHHHHhcCCCCCEEEEcCCChHHHHHHHHH---HHHcCCcEE
Confidence 468889887 589999999874 34454433 345677554
No 295
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.64 E-value=0.0084 Score=58.76 Aligned_cols=68 Identities=18% Similarity=0.174 Sum_probs=45.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCC--cEEEEEecCChhhHHHHHH--cCcee--cCCC--cCCHHhhcCcCCEE
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARA--AGFTE--ENGT--LGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G--~~ViVg~r~~s~s~~~A~~--~G~~~--~~~~--~~s~~Ea~~~ADIV 182 (417)
+||+|||. |.+|.+++..|... | .+|.+.++.. ....+.+ ..... ...+ ..+.++++++||+|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~------~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvV 72 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS------PLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVV 72 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC------TTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEE
Confidence 48999998 99999999999887 6 4777666654 2222222 22110 0000 13577899999999
Q ss_pred EEccC
Q 014834 183 LLLIS 187 (417)
Q Consensus 183 iLavp 187 (417)
|++..
T Consensus 73 vi~ag 77 (314)
T 1mld_A 73 VIPAG 77 (314)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 99863
No 296
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.53 E-value=0.00079 Score=62.94 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=53.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC-cCCEEEEccCCch
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~-~ADIViLavpd~~ 190 (417)
++|+|||+|++|.++++.+... . |++++...+.+...... ...|+.+. ...++++.++ +.|+|++|+|...
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~----~-g~~iVg~~D~dp~k~g~-~i~gv~V~--~~~dl~ell~~~ID~ViIA~Ps~~ 152 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFG----E-SFELRGFFDVDPEKVGR-PVRGGVIE--HVDLLPQRVPGRIEIALLTVPREA 152 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCC----S-SEEEEEEEESCTTTTTC-EETTEEEE--EGGGHHHHSTTTCCEEEECSCHHH
T ss_pred CEEEEECccHHHHHHHHhHhhc----C-CcEEEEEEeCCHHHHhh-hhcCCeee--cHHhHHHHHHcCCCEEEEeCCchh
Confidence 6899999999999999864332 2 67665555443322211 11243321 1456788876 5899999999988
Q ss_pred HHHHHHHHHh
Q 014834 191 QADNYEKIFS 200 (417)
Q Consensus 191 ~~~Vl~eI~~ 200 (417)
+.++.+.+..
T Consensus 153 ~~ei~~~l~~ 162 (211)
T 2dt5_A 153 AQKAADLLVA 162 (211)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888776644
No 297
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.43 E-value=0.0055 Score=63.26 Aligned_cols=75 Identities=17% Similarity=0.229 Sum_probs=53.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC---HHhh-cCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET-ISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s---~~Ea-~~~ADIViLavp 187 (417)
|||-|+|+|.+|..+|+.|... |++|++-+...+...+...+.++....|...+ ++++ +++||+++.+|+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~------~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~ 77 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE------NNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTN 77 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST------TEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence 7999999999999999999988 99988776654443344455665432222233 3333 789999998888
Q ss_pred CchHH
Q 014834 188 DAAQA 192 (417)
Q Consensus 188 d~~~~ 192 (417)
+....
T Consensus 78 ~De~N 82 (461)
T 4g65_A 78 TDETN 82 (461)
T ss_dssp CHHHH
T ss_pred ChHHH
Confidence 76543
No 298
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.41 E-value=0.028 Score=51.05 Aligned_cols=76 Identities=18% Similarity=0.203 Sum_probs=52.6
Q ss_pred hhhccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCc-eecCCCc-CCHHhhcCcCCE
Q 014834 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF-TEENGTL-GDIYETISGSDL 181 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~-~~~~~~~-~s~~Ea~~~ADI 181 (417)
...|+| |+|.|.|. |.+|.++++.|.+. |++|++..|+.++. +.....++ ......+ .++.+++.+.|+
T Consensus 16 ~~~l~~-~~ilVtGatG~iG~~l~~~L~~~------G~~V~~~~R~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~ 87 (236)
T 3e8x_A 16 NLYFQG-MRVLVVGANGKVARYLLSELKNK------GHEPVAMVRNEEQG-PELRERGASDIVVANLEEDFSHAFASIDA 87 (236)
T ss_dssp -----C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSGGGH-HHHHHTTCSEEEECCTTSCCGGGGTTCSE
T ss_pred ccCcCC-CeEEEECCCChHHHHHHHHHHhC------CCeEEEEECChHHH-HHHHhCCCceEEEcccHHHHHHHHcCCCE
Confidence 467889 99999997 99999999999999 99998888875543 33334455 3211111 456778889999
Q ss_pred EEEccCC
Q 014834 182 VLLLISD 188 (417)
Q Consensus 182 ViLavpd 188 (417)
||.+...
T Consensus 88 vi~~ag~ 94 (236)
T 3e8x_A 88 VVFAAGS 94 (236)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998764
No 299
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.38 E-value=0.0028 Score=61.21 Aligned_cols=97 Identities=19% Similarity=0.178 Sum_probs=63.9
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
.++| +++.|||.|-.+.+++..|.+. |. +|.|.+|+.++..+.++..+.....-......+..+++|+||.+
T Consensus 122 ~~~~-~~~lilGaGGaarai~~aL~~~------g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNa 194 (269)
T 3tum_A 122 EPAG-KRALVIGCGGVGSAIAYALAEA------GIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANA 194 (269)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEEC
T ss_pred Cccc-CeEEEEecHHHHHHHHHHHHHh------CCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccC
Confidence 4577 9999999999999999999998 86 78889988766666665432110000012233456789999999
Q ss_pred cCCchHHH----HHHHHHhcCCCCcEEEE
Q 014834 186 ISDAAQAD----NYEKIFSCMKPNSILGL 210 (417)
Q Consensus 186 vpd~~~~~----Vl~eI~~~lk~gaiLi~ 210 (417)
||-..... +-......++++.+|.+
T Consensus 195 Tp~Gm~~~~~~p~~~~~~~~l~~~~~v~D 223 (269)
T 3tum_A 195 SPVGMGTRAELPLSAALLATLQPDTLVAD 223 (269)
T ss_dssp SSTTCSTTCCCSSCHHHHHTCCTTSEEEE
T ss_pred CccccCCCCCCCCChHHHhccCCCcEEEE
Confidence 99543221 11233445667776663
No 300
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.37 E-value=0.014 Score=60.80 Aligned_cols=75 Identities=20% Similarity=0.118 Sum_probs=44.5
Q ss_pred CEEEEEcccchH--HHHHHHHHhhhhhhcCCcEEEEEecCChhhH---HHHH----HcCceecCCCcCCHHhhcCcCCEE
Q 014834 112 NQIGVIGWGSQG--PAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEAR----AAGFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~G~mG--~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~---~~A~----~~G~~~~~~~~~s~~Ea~~~ADIV 182 (417)
+||+|||.|+|| .+++..|.... +-.+.+|++.++..++.. .... ..+....=....|.++++++||+|
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~~--~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~V 81 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKTP--GLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFV 81 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCG--GGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred CEEEEECCCchHHHHHHHHHHHhcC--cCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEE
Confidence 699999999984 66677776420 001557887776543211 1111 111110000135778899999999
Q ss_pred EEccCC
Q 014834 183 LLLISD 188 (417)
Q Consensus 183 iLavpd 188 (417)
|+++|.
T Consensus 82 Iiaagv 87 (480)
T 1obb_A 82 INTAMV 87 (480)
T ss_dssp EECCCT
T ss_pred EECCCc
Confidence 999974
No 301
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.37 E-value=0.0066 Score=59.28 Aligned_cols=78 Identities=17% Similarity=0.175 Sum_probs=57.7
Q ss_pred hhccCCCEEEEEcccch-HHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEE
Q 014834 106 DAFNGINQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~m-G~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViL 184 (417)
..++| +++.|||.|++ |..+|+.|... +.|..|++..+. ..++.+.+++||+||.
T Consensus 154 i~l~g-k~vvVvG~s~iVG~p~A~lL~~~----g~~atVtv~h~~-------------------t~~L~~~~~~ADIVI~ 209 (281)
T 2c2x_A 154 ISIAG-AHVVVIGRGVTVGRPLGLLLTRR----SENATVTLCHTG-------------------TRDLPALTRQADIVVA 209 (281)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHTST----TTCCEEEEECTT-------------------CSCHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCcHHHHHHHHHHhcC----CCCCEEEEEECc-------------------hhHHHHHHhhCCEEEE
Confidence 36889 99999999986 99999999765 013477776432 2368889999999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+++-... +. ..++|+|++|++.+
T Consensus 210 Avg~p~~---I~--~~~vk~GavVIDVg 232 (281)
T 2c2x_A 210 AVGVAHL---LT--ADMVRPGAAVIDVG 232 (281)
T ss_dssp CSCCTTC---BC--GGGSCTTCEEEECC
T ss_pred CCCCCcc---cC--HHHcCCCcEEEEcc
Confidence 9984332 21 23478999888765
No 302
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.36 E-value=0.021 Score=53.12 Aligned_cols=70 Identities=13% Similarity=0.087 Sum_probs=50.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCc
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~ 189 (417)
||||.|+|.|.+|..+++.|.+. |++|++..|+..+ .......++....+.+.+++ ++++|+||.+..+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ------GWRIIGTSRNPDQ-MEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG------TCEEEEEESCGGG-HHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHC------CCEEEEEEcChhh-hhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc
Confidence 38999999999999999999999 9999887776543 33334456543222233433 78899999988643
No 303
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.35 E-value=0.006 Score=52.22 Aligned_cols=86 Identities=21% Similarity=0.167 Sum_probs=63.7
Q ss_pred CCEEEEEcc----cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEcc
Q 014834 111 INQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 111 mkkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
.++|+|||. +..|..+.++|++. |++|+-.+.+... -.|... ..++.|+=. -|++++++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~------g~~V~pVnP~~~~------i~G~~~----y~sl~dlp~-vDlavi~~ 66 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSH------GHEFIPVGRKKGE------VLGKTI----INERPVIEG-VDTVTLYI 66 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHH------TCCEEEESSSCSE------ETTEEC----BCSCCCCTT-CCEEEECS
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHC------CCeEEEECCCCCc------CCCeec----cCChHHCCC-CCEEEEEe
Confidence 378999998 56899999999999 9987655543221 146654 556666656 89999999
Q ss_pred CCchHHHHHHHHHhcCCCCcEEEEecCch
Q 014834 187 SDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~gaiLi~a~G~~ 215 (417)
|+....++++++... ... .|++..|+.
T Consensus 67 p~~~v~~~v~e~~~~-g~k-~v~~~~G~~ 93 (122)
T 3ff4_A 67 NPQNQLSEYNYILSL-KPK-RVIFNPGTE 93 (122)
T ss_dssp CHHHHGGGHHHHHHH-CCS-EEEECTTCC
T ss_pred CHHHHHHHHHHHHhc-CCC-EEEECCCCC
Confidence 999999999986653 223 367889983
No 304
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.34 E-value=0.011 Score=60.22 Aligned_cols=90 Identities=18% Similarity=0.172 Sum_probs=63.9
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecC----Chhh--------HHHHHHcCceecCCCcCCHH
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK----GSRS--------FAEARAAGFTEENGTLGDIY 173 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~----~s~s--------~~~A~~~G~~~~~~~~~s~~ 173 (417)
.++. .||.|+|.|.+|.++|+.|... |. +|++.+++ ..+. ...|++.... ....+++
T Consensus 189 ~l~~-~kVVv~GAGaAG~~iAkll~~~------G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~---~~~~~L~ 258 (388)
T 1vl6_A 189 KIEE-VKVVVNGIGAAGYNIVKFLLDL------GVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE---RLSGDLE 258 (388)
T ss_dssp CTTT-CEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT---CCCSCHH
T ss_pred CCCC-cEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc---CchhhHH
Confidence 4566 8999999999999999999998 88 88888886 3331 3455443211 1246799
Q ss_pred hhcCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEE
Q 014834 174 ETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 174 Ea~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi 209 (417)
|+++++|++|=+..|.... +++...|+++.+|.
T Consensus 259 eav~~ADVlIG~Sap~l~t---~emVk~Ma~~pIIf 291 (388)
T 1vl6_A 259 TALEGADFFIGVSRGNILK---PEWIKKMSRKPVIF 291 (388)
T ss_dssp HHHTTCSEEEECSCSSCSC---HHHHTTSCSSCEEE
T ss_pred HHHccCCEEEEeCCCCccC---HHHHHhcCCCCEEE
Confidence 9999999999887653321 23444577777664
No 305
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.32 E-value=0.0016 Score=62.84 Aligned_cols=160 Identities=14% Similarity=0.105 Sum_probs=89.2
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCh-hh--HHHHHH-----cCceecCCCcCCHHhhcCcCCEE
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RS--FAEARA-----AGFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s-~s--~~~A~~-----~G~~~~~~~~~s~~Ea~~~ADIV 182 (417)
+||+|+|+ |.||..+++.+... .|++++...+.+. +. .+.... .|+.. ..++++++.++|+|
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~-----~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~----~~dl~~~l~~~DvV 76 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALAL-----EGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV----QSSLDAVKDDFDVF 76 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-----TTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE----ESCSTTTTTSCSEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCchhhhhhhHHHHcCCCcCCcee----cCCHHHHhcCCCEE
Confidence 58999999 99999999988743 1666653333322 10 011111 12222 34677888899999
Q ss_pred EEccCCchHHHHHHHHHhcCCCCcEEEE-ecCchhhhhhhcccCCCCCccEEEeccCCCchhHH--HHHhhccccc--CC
Q 014834 183 LLLISDAAQADNYEKIFSCMKPNSILGL-SHGFLLGHLQSIGLDFPKNIGVIAVCPKGMGPSVR--RLYVQGKEIN--GA 257 (417)
Q Consensus 183 iLavpd~~~~~Vl~eI~~~lk~gaiLi~-a~G~~i~~~~~~~i~~~~dv~VI~v~Pntpg~~vr--~ly~~G~~~~--G~ 257 (417)
|-.++|....+++..... .|.-+++ ..|++....+. .....+.+. +...||.+-...- ++.+.--... ++
T Consensus 77 IDft~p~~~~~~~~~a~~---~G~~vVigTtG~~~e~~~~-L~~~a~~~~-vv~a~N~siGvn~~~~l~~~aa~~~~~~~ 151 (273)
T 1dih_A 77 IDFTRPEGTLNHLAFCRQ---HGKGMVIGTTGFDEAGKQA-IRDAAADIA-IVFAANFSVGVNVMLKLLEKAAKVMGDYT 151 (273)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCEEEECCCCCCHHHHHH-HHHHTTTSC-EEECSCCCHHHHHHHHHHHHHHHHHTTTS
T ss_pred EEcCChHHHHHHHHHHHh---CCCCEEEECCCCCHHHHHH-HHHhcCCCC-EEEEecCcHHHHHHHHHHHHHHHhcCCCC
Confidence 988887777666655433 4543443 56886543221 112234444 5668887654311 1111100011 12
Q ss_pred CceEEEeecC----C-CCHHHHHHHHHHHHHhCC
Q 014834 258 GINSSFAVHQ----D-VDGRATNVALGWSVALGS 286 (417)
Q Consensus 258 Gv~~liav~~----d-vsgea~e~a~~L~~alG~ 286 (417)
-+-. +-.|. | +||.++.++..+....|.
T Consensus 152 diei-iE~Hh~~K~DaPSGTA~~~ae~i~~~~~~ 184 (273)
T 1dih_A 152 DIEI-IEAHHRHKVDAPSGTALAMGEAIAHALDK 184 (273)
T ss_dssp EEEE-EEEECTTCCSSSCHHHHHHHHHHHHHTTC
T ss_pred CEEE-EEeecCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 2322 22232 3 689999999999888874
No 306
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.31 E-value=0.016 Score=54.57 Aligned_cols=88 Identities=10% Similarity=0.118 Sum_probs=61.4
Q ss_pred cccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhH-HHHHHcCceecCCCcCCHHhhcCcC
Q 014834 101 FKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AEARAAGFTEENGTLGDIYETISGS 179 (417)
Q Consensus 101 f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~-~~A~~~G~~~~~~~~~s~~Ea~~~A 179 (417)
||.. -.++| ++|-|||.|.+|..-++.|.+. |.+|+|......... +.+.+.++....+. .+ ++-+.++
T Consensus 23 ~Pif-l~L~g-k~VLVVGgG~va~~ka~~Ll~~------GA~VtVvap~~~~~l~~l~~~~~i~~i~~~-~~-~~dL~~a 92 (223)
T 3dfz_A 23 YTVM-LDLKG-RSVLVVGGGTIATRRIKGFLQE------GAAITVVAPTVSAEINEWEAKGQLRVKRKK-VG-EEDLLNV 92 (223)
T ss_dssp CEEE-ECCTT-CCEEEECCSHHHHHHHHHHGGG------CCCEEEECSSCCHHHHHHHHTTSCEEECSC-CC-GGGSSSC
T ss_pred cccE-EEcCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCCCCHHHHHHHHcCCcEEEECC-CC-HhHhCCC
Confidence 6655 56899 9999999999999999999999 988887765533333 34443334432222 12 3457889
Q ss_pred CEEEEccCCchHHHHHHHH
Q 014834 180 DLVLLLISDAAQADNYEKI 198 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI 198 (417)
|+||.++.+......+.+.
T Consensus 93 dLVIaAT~d~~~N~~I~~~ 111 (223)
T 3dfz_A 93 FFIVVATNDQAVNKFVKQH 111 (223)
T ss_dssp SEEEECCCCTHHHHHHHHH
T ss_pred CEEEECCCCHHHHHHHHHH
Confidence 9999999887765544444
No 307
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.28 E-value=0.014 Score=58.25 Aligned_cols=74 Identities=16% Similarity=0.120 Sum_probs=47.3
Q ss_pred hhccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHH--c-CceecC-CCcCCHHhhcCc
Q 014834 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--A-GFTEEN-GTLGDIYETISG 178 (417)
Q Consensus 106 ~~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~--~-G~~~~~-~~~~s~~Ea~~~ 178 (417)
+++.+ +||+|||. |.+|.++|..+... |+ +|++.+....+....+.+ . .+...+ ....+..+++++
T Consensus 4 ~~~~~-~KV~ViGaaG~VG~~~a~~l~~~------g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~d 76 (343)
T 3fi9_A 4 SYLTE-EKLTIVGAAGMIGSNMAQTAAMM------RLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTD 76 (343)
T ss_dssp CCSCS-SEEEEETTTSHHHHHHHHHHHHT------TCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTT
T ss_pred cccCC-CEEEEECCCChHHHHHHHHHHhc------CCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCC
Confidence 34455 89999998 99999999998887 75 676665543322211111 1 111000 012467888999
Q ss_pred CCEEEEcc
Q 014834 179 SDLVLLLI 186 (417)
Q Consensus 179 ADIViLav 186 (417)
||+||++.
T Consensus 77 ADvVvita 84 (343)
T 3fi9_A 77 AKYIVSSG 84 (343)
T ss_dssp EEEEEECC
T ss_pred CCEEEEcc
Confidence 99999985
No 308
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=96.23 E-value=0.0031 Score=65.14 Aligned_cols=87 Identities=17% Similarity=0.161 Sum_probs=64.9
Q ss_pred CEEEEEccc----chHHHHHHHHHhhhhhhcCC-cEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEcc
Q 014834 112 NQIGVIGWG----SQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G----~mG~AiA~~Lr~s~~~~~~G-~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLav 186 (417)
++|+|||.+ +.|..+.++|++. | ..|+-.+.. ... -.|... ..++.|+-+..|++++++
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~------g~~~v~pVnP~-~~~-----i~G~~~----y~sl~~lp~~~Dlavi~v 72 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEY------KKGKVYPVNIK-EEE-----VQGVKA----YKSVKDIPDEIDLAIIVV 72 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTC------CSSEEEEECSS-CSE-----ETTEEC----BSSTTSCSSCCSEEEECS
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHc------CCCEEEEECCC-CCe-----ECCEec----cCCHHHcCCCCCEEEEec
Confidence 899999998 7899999999887 5 444433332 111 147765 567888888899999999
Q ss_pred CCchHHHHHHHHHhcCCCCcEEEEecCch
Q 014834 187 SDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~gaiLi~a~G~~ 215 (417)
|+....++++++... ....+|+++.||.
T Consensus 73 p~~~~~~~v~e~~~~-Gi~~vv~~s~G~~ 100 (457)
T 2csu_A 73 PKRFVKDTLIQCGEK-GVKGVVIITAGFG 100 (457)
T ss_dssp CHHHHHHHHHHHHHH-TCCEEEECCCSST
T ss_pred CHHHHHHHHHHHHHc-CCCEEEEecCCCC
Confidence 999999999886543 2344778898984
No 309
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.22 E-value=0.005 Score=59.27 Aligned_cols=80 Identities=15% Similarity=0.017 Sum_probs=54.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCCchH
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd~~~ 191 (417)
++|++||+|+||..+++. . ++++...+. ++.. +.|+.. +.|+++++.++|+|+-|.++.+.
T Consensus 13 ~rV~i~G~GaIG~~v~~~-~--------~leLv~v~~--~k~g----elgv~a----~~d~d~lla~pD~VVe~A~~~av 73 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL-G--------NFEKIYAYD--RISK----DIPGVV----RLDEFQVPSDVSTVVECASPEAV 73 (253)
T ss_dssp CEEEEECCSHHHHHHHHH-S--------CCSEEEEEC--SSCC----CCSSSE----ECSSCCCCTTCCEEEECSCHHHH
T ss_pred ceEEEECcCHHHHHHHhc-C--------CcEEEEEEe--cccc----ccCcee----eCCHHHHhhCCCEEEECCCHHHH
Confidence 799999999999999987 2 454432222 2211 226544 56788888899999999987655
Q ss_pred HHHHHHHHhcCCCCcEEE-EecC
Q 014834 192 ADNYEKIFSCMKPNSILG-LSHG 213 (417)
Q Consensus 192 ~~Vl~eI~~~lk~gaiLi-~a~G 213 (417)
.+.+ .+.|+.|.-|+ .+-|
T Consensus 74 ~e~~---~~iL~aG~dvv~~S~g 93 (253)
T 1j5p_A 74 KEYS---LQILKNPVNYIIISTS 93 (253)
T ss_dssp HHHH---HHHTTSSSEEEECCGG
T ss_pred HHHH---HHHHHCCCCEEEcChh
Confidence 5544 44577787555 4444
No 310
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.19 E-value=0.012 Score=58.44 Aligned_cols=95 Identities=16% Similarity=0.085 Sum_probs=58.4
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecC-ChhhHHHHHHcCcee--------cCCCc--CCHHhhcC-c
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTE--------ENGTL--GDIYETIS-G 178 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~-~s~s~~~A~~~G~~~--------~~~~~--~s~~Ea~~-~ 178 (417)
+||+||| .|.+|..+++.|.+. .+++|+...++ .+.........+... .+-.+ .+.++..+ +
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-----p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-----PMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFED 83 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-----SSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTT
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-----CCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCC
Confidence 6899999 899999999998765 13566544432 111111122222110 00001 14455556 8
Q ss_pred CCEEEEccCCchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 179 ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+|+||+|+|.....++.+.+. +.|..|++.+|.
T Consensus 84 ~DvV~~atp~~~~~~~a~~~~---~aG~~VId~s~~ 116 (354)
T 1ys4_A 84 VDIVFSALPSDLAKKFEPEFA---KEGKLIFSNASA 116 (354)
T ss_dssp CCEEEECCCHHHHHHHHHHHH---HTTCEEEECCST
T ss_pred CCEEEECCCchHHHHHHHHHH---HCCCEEEECCch
Confidence 999999999988877776654 357778887774
No 311
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.13 E-value=0.017 Score=56.10 Aligned_cols=92 Identities=11% Similarity=0.180 Sum_probs=61.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCH---Hhh-cCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YET-ISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~---~Ea-~~~ADIViLavp 187 (417)
++|.|+|+|..|..+++.|.+. |+ |++.+++ +...+ +++.|+....|...+. +++ +++||.|+++++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~------g~-v~vid~~-~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS------EV-FVLAEDE-NVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS------CE-EEEESCG-GGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred CCEEEECCcHHHHHHHHHHHhC------Cc-EEEEeCC-hhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence 6899999999999999999988 88 7665544 44455 6667765433333333 334 789999999999
Q ss_pred CchHHHHHHHHHhcCCCC-cEEEEec
Q 014834 188 DAAQADNYEKIFSCMKPN-SILGLSH 212 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~g-aiLi~a~ 212 (417)
+....-..-.....+.|. .++.-+.
T Consensus 187 ~d~~n~~~~~~ar~~~~~~~iiar~~ 212 (336)
T 1lnq_A 187 SDSETIHCILGIRKIDESVRIIAEAE 212 (336)
T ss_dssp SHHHHHHHHHHHHTTCTTSEEEEECS
T ss_pred ccHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 875443333444455565 4555443
No 312
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.02 E-value=0.021 Score=55.81 Aligned_cols=70 Identities=17% Similarity=0.077 Sum_probs=51.0
Q ss_pred CCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCh-hhHHHHHHcCceecCCCcCCHHhhc-CcCCEEEEc--
Q 014834 111 INQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLL-- 185 (417)
Q Consensus 111 mkkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~ViVg~r~~s-~s~~~A~~~G~~~~~~~~~s~~Ea~-~~ADIViLa-- 185 (417)
||+|.|||.|-+|.+ +|+.|++. |++|.+.++... ...+..++.|+....+ .+.+++. .++|+||+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~------G~~V~~~D~~~~~~~~~~L~~~gi~v~~g--~~~~~l~~~~~d~vV~Spg 75 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA------GFEVSGCDAKMYPPMSTQLEALGIDVYEG--FDAAQLDEFKADVYVIGNV 75 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT------TCEEEEEESSCCTTHHHHHHHTTCEEEES--CCGGGGGSCCCSEEEECTT
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC------CCEEEEEcCCCCcHHHHHHHhCCCEEECC--CCHHHcCCCCCCEEEECCC
Confidence 589999999999995 99999999 999998887543 2344556678765211 2444554 579999985
Q ss_pred cCC
Q 014834 186 ISD 188 (417)
Q Consensus 186 vpd 188 (417)
+|+
T Consensus 76 i~~ 78 (326)
T 3eag_A 76 AKR 78 (326)
T ss_dssp CCT
T ss_pred cCC
Confidence 554
No 313
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.01 E-value=0.014 Score=58.13 Aligned_cols=94 Identities=11% Similarity=0.041 Sum_probs=57.3
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCcee--cCCCcCCHHhhcCcCCEEEEccC
Q 014834 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE--ENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 111 mkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~--~~~~~~s~~Ea~~~ADIViLavp 187 (417)
|+||+||| .|.+|..+.+.|.+. ..++++...+..+...+.....+... .+-.+.+.++ +.++|+||+|+|
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-----p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g 77 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-----PYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALP 77 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-----TTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-----CCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCC
Confidence 36899999 699999999999865 13465544443221111111111100 0001223334 578999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
.....++.+... +.|..|++.++
T Consensus 78 ~~~s~~~a~~~~---~aG~~VId~Sa 100 (345)
T 2ozp_A 78 HGVFAREFDRYS---ALAPVLVDLSA 100 (345)
T ss_dssp TTHHHHTHHHHH---TTCSEEEECSS
T ss_pred cHHHHHHHHHHH---HCCCEEEEcCc
Confidence 988877776543 56777887776
No 314
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=95.92 E-value=0.019 Score=56.78 Aligned_cols=97 Identities=15% Similarity=0.156 Sum_probs=55.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcC--CcEEE-EEecCCh--------hhH-HHHHHcCceecCCCcCCHHhhcC--
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKS--DIVVK-VGLRKGS--------RSF-AEARAAGFTEENGTLGDIYETIS-- 177 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~--G~~Vi-Vg~r~~s--------~s~-~~A~~~G~~~~~~~~~s~~Ea~~-- 177 (417)
.+|+|||+|+||..+++.|.+. .+.+. +++|+ |.+++.. ..+ +.+.+.|... +-.. +..+.+.
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~-~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~-~~~~-d~~e~l~~~ 81 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDAS-NRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRIS-DRAF-SGPEDLMGE 81 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-HHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSC-SSBC-CSGGGGTTS
T ss_pred EEEEEEcCcHHHHHHHHHHHhc-hhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCC-cccC-CHHHHhcCC
Confidence 3799999999999999999873 11122 34443 3333321 012 2333445221 0012 5566664
Q ss_pred cCCEEEEccCCchHH-HHHHHHHhcCCCCcEEEEe
Q 014834 178 GSDLVLLLISDAAQA-DNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 178 ~ADIViLavpd~~~~-~Vl~eI~~~lk~gaiLi~a 211 (417)
+.|+|+.++|+..+. ..++-+...|+.|+-|+.+
T Consensus 82 ~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta 116 (325)
T 3ing_A 82 AADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA 116 (325)
T ss_dssp CCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCEEEECCCCccccchHHHHHHHHHHCCCeEEEc
Confidence 589999999987542 2344445556677766543
No 315
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.86 E-value=0.04 Score=54.15 Aligned_cols=67 Identities=13% Similarity=0.180 Sum_probs=44.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC--cEEEEEecCChhhHHHHH--Hc-Cc--eecCCC--cCCHHhhcCcCCE
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEAR--AA-GF--TEENGT--LGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G--~~ViVg~r~~s~s~~~A~--~~-G~--~~~~~~--~~s~~Ea~~~ADI 181 (417)
+||+||| .|.+|.+++..|.+. | .+|.+.+.... ...+. .. .. .. ... ..+.++++++||+
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~------g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v-~~~~~t~d~~~al~gaDv 79 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMN------PLVSVLHLYDVVNA--PGVTADISHMDTGAVV-RGFLGQQQLEAALTGMDL 79 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHC------TTEEEEEEEESSSH--HHHHHHHHTSCSSCEE-EEEESHHHHHHHHTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCCEEEEEeCCCc--HhHHHHhhcccccceE-EEEeCCCCHHHHcCCCCE
Confidence 7999999 899999999999887 7 56766554433 22221 11 11 11 000 1256788999999
Q ss_pred EEEccC
Q 014834 182 VLLLIS 187 (417)
Q Consensus 182 ViLavp 187 (417)
||++.+
T Consensus 80 Vi~~ag 85 (326)
T 1smk_A 80 IIVPAG 85 (326)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999975
No 316
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.81 E-value=0.017 Score=57.72 Aligned_cols=92 Identities=11% Similarity=0.039 Sum_probs=57.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCcee----cCCCcCCHHhhcCcCCEEEEcc
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE----ENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~----~~~~~~s~~Ea~~~ADIViLav 186 (417)
.||+|+| .|.+|..+.+.|.+. ..++++...+..+...+.....+... .+-.+.+ ++...++|+||+|+
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~at 90 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH-----PHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCL 90 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC-----SSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECC
T ss_pred cEEEEECcCCHHHHHHHHHHHcC-----CCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcC
Confidence 5899999 899999999999876 13466544443222222222222110 0000122 44556899999999
Q ss_pred CCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 187 SDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
|.....+.... + +.|..+++.++
T Consensus 91 p~~~s~~~a~~---~-~aG~~VId~sa 113 (359)
T 1xyg_A 91 PHGTTQEIIKE---L-PTALKIVDLSA 113 (359)
T ss_dssp CTTTHHHHHHT---S-CTTCEEEECSS
T ss_pred CchhHHHHHHH---H-hCCCEEEECCc
Confidence 99887666543 3 66888888776
No 317
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.80 E-value=0.015 Score=56.96 Aligned_cols=68 Identities=16% Similarity=0.127 Sum_probs=43.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHHc-------CceecCCCcCCHHhhcCcCCEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA-------GFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~~-------G~~~~~~~~~s~~Ea~~~ADIV 182 (417)
|||+|||.|.+|.++|..|..+ ++ ++.+.+....+..-.|.+. +.... -...+..+.+++||+|
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~------~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~-i~~~~d~~~~~~aDvV 73 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPK-IVGGADYSLLKGSEII 73 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCE-EEEESCGGGGTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCe-EecCCCHHHhCCCCEE
Confidence 6899999999999999999888 65 6666665433332222221 11000 0012223678999999
Q ss_pred EEcc
Q 014834 183 LLLI 186 (417)
Q Consensus 183 iLav 186 (417)
+++.
T Consensus 74 vitA 77 (294)
T 2x0j_A 74 VVTA 77 (294)
T ss_dssp EECC
T ss_pred EEec
Confidence 9974
No 318
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.80 E-value=0.018 Score=57.45 Aligned_cols=93 Identities=16% Similarity=0.212 Sum_probs=57.8
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCC---h--hhHHHHH--HcCceecCCCcC---CHHhhcCcC
Q 014834 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG---S--RSFAEAR--AAGFTEENGTLG---DIYETISGS 179 (417)
Q Consensus 111 mkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~---s--~s~~~A~--~~G~~~~~~~~~---s~~Ea~~~A 179 (417)
|+||+||| .|.+|..+.+.|.+. ..+++.....+. + +.....- -.|... -.+. +.++.++++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-----p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~--~~v~~~~~~~~~~~~~ 76 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-----PHMNITALTVSAQSNDAGKLISDLHPQLKGIVE--LPLQPMSDISEFSPGV 76 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-----TTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCC--CBEEEESSGGGTCTTC
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-----CCCcEEEEEecCchhhcCCchHHhCccccCccc--eeEeccCCHHHHhcCC
Confidence 57999999 599999999988874 145554332221 1 2222110 012110 0111 344555899
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
|+||+|+|.....+..+++. +.|..|++.++
T Consensus 77 Dvvf~a~p~~~s~~~~~~~~---~~g~~vIDlSa 107 (337)
T 3dr3_A 77 DVVFLATAHEVSHDLAPQFL---EAGCVVFDLSG 107 (337)
T ss_dssp SEEEECSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CEEEECCChHHHHHHHHHHH---HCCCEEEEcCC
Confidence 99999999888777777654 46788887766
No 319
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=95.75 E-value=0.038 Score=57.05 Aligned_cols=74 Identities=20% Similarity=0.093 Sum_probs=45.6
Q ss_pred CEEEEEcccch-HHHHHHHHHh--hhhhhcC-CcEEEEEecCC--hhhHH---HHH----HcCceecCCCcCCHHhhcCc
Q 014834 112 NQIGVIGWGSQ-GPAQAQNLRD--SLAEAKS-DIVVKVGLRKG--SRSFA---EAR----AAGFTEENGTLGDIYETISG 178 (417)
Q Consensus 112 kkIgIIG~G~m-G~AiA~~Lr~--s~~~~~~-G~~ViVg~r~~--s~s~~---~A~----~~G~~~~~~~~~s~~Ea~~~ 178 (417)
+||+|||.|+. |.+++..|.. . +. +.+|+++++.. ++... .+. ..+....=....|..+++++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~----~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~g 83 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYH----ELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDG 83 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTT----TCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC----CCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCC
Confidence 69999999998 8887777765 3 11 22677776654 32111 111 12211000013577889999
Q ss_pred CCEEEEccCCc
Q 014834 179 SDLVLLLISDA 189 (417)
Q Consensus 179 ADIViLavpd~ 189 (417)
||+||++++..
T Consensus 84 AD~VVitagv~ 94 (450)
T 1s6y_A 84 ADFVTTQFRVG 94 (450)
T ss_dssp CSEEEECCCTT
T ss_pred CCEEEEcCCCC
Confidence 99999999964
No 320
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=95.72 E-value=0.04 Score=57.29 Aligned_cols=75 Identities=19% Similarity=0.058 Sum_probs=44.8
Q ss_pred CEEEEEcccch-HHHHHHHHHhhhhhhcC-CcEEEEEecCChhhHH---HHH----HcCc--eecCCCcCCHHhhcCcCC
Q 014834 112 NQIGVIGWGSQ-GPAQAQNLRDSLAEAKS-DIVVKVGLRKGSRSFA---EAR----AAGF--TEENGTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~m-G~AiA~~Lr~s~~~~~~-G~~ViVg~r~~s~s~~---~A~----~~G~--~~~~~~~~s~~Ea~~~AD 180 (417)
+||+|||.|+. |.+++..|... ..+. +.+|.++++..++... ... ..+. .. ....|.++++++||
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~--~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I--~~t~D~~eal~~AD 104 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDH--LEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEF--AATTDPEEAFTDVD 104 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHT--TTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEE--EEESCHHHHHSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhC--CCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEE--EEECCHHHHHcCCC
Confidence 59999999998 66666666543 0011 3367777665432111 111 1111 11 01357788999999
Q ss_pred EEEEccCCch
Q 014834 181 LVLLLISDAA 190 (417)
Q Consensus 181 IViLavpd~~ 190 (417)
+||+++|...
T Consensus 105 ~VViaag~~~ 114 (472)
T 1u8x_X 105 FVMAHIRVGK 114 (472)
T ss_dssp EEEECCCTTH
T ss_pred EEEEcCCCcc
Confidence 9999998743
No 321
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.72 E-value=0.032 Score=53.15 Aligned_cols=144 Identities=16% Similarity=0.197 Sum_probs=82.0
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhc-CcCCEEEEccCCc
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~-~~ADIViLavpd~ 189 (417)
+||+|+|+ |.||..+++.+.+. .+++++...+.. .++++++ .++|+||=.++|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-----~~~elva~~d~~-------------------~dl~~~~~~~~DvvIDfT~p~ 56 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-----DDLTLSAELDAG-------------------DPLSLLTDGNTEVVIDFTHPD 56 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-----TTCEEEEEECTT-------------------CCTHHHHHTTCCEEEECSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEccC-------------------CCHHHHhccCCcEEEEccChH
Confidence 48999996 99999999998753 167776554432 1233444 3789999888888
Q ss_pred hHHHHHHHHHhcCCCCc-EEEEecCchhhhhhhcccCCC--CCccEEEeccCCCchh--HHHHHhhcccccCCCceEEEe
Q 014834 190 AQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSIGLDFP--KNIGVIAVCPKGMGPS--VRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 190 ~~~~Vl~eI~~~lk~ga-iLi~a~G~~i~~~~~~~i~~~--~dv~VI~v~Pntpg~~--vr~ly~~G~~~~G~Gv~~lia 264 (417)
...+.+..... .|. +|+-+.|++-...+....... +++. +...||+.--+ +..+.+.--... .-+-. +-
T Consensus 57 a~~~~~~~a~~---~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~-vv~a~N~siGv~ll~~l~~~aa~~~-~dieI-iE 130 (245)
T 1p9l_A 57 VVMGNLEFLID---NGIHAVVGTTGFTAERFQQVESWLVAKPNTS-VLIAPNFAIGAVLSMHFAKQAARFF-DSAEV-IE 130 (245)
T ss_dssp THHHHHHHHHH---TTCEEEECCCCCCHHHHHHHHHHHHTSTTCE-EEECSCCCHHHHHHHHHHHHHGGGC-SEEEE-EE
T ss_pred HHHHHHHHHHH---cCCCEEEcCCCCCHHHHHHHHHHHHhCCCCC-EEEECCccHHHHHHHHHHHHHHhhc-CCEEE-EE
Confidence 87777765443 344 455566886543221000101 1333 45678876543 112222111111 11222 22
Q ss_pred ecC----C-CCHHHHHHHHHHHHHhC
Q 014834 265 VHQ----D-VDGRATNVALGWSVALG 285 (417)
Q Consensus 265 v~~----d-vsgea~e~a~~L~~alG 285 (417)
.|. | +||.++.++..+....+
T Consensus 131 ~HH~~K~DaPSGTA~~lae~i~~~~~ 156 (245)
T 1p9l_A 131 LHHPHKADAPSGTAARTAKLIAEARK 156 (245)
T ss_dssp EECTTCCSSSCHHHHHHHHHHHHHTT
T ss_pred CcccCCCCCCCHHHHHHHHHHHHhhc
Confidence 233 3 58999999999987765
No 322
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=95.71 E-value=0.057 Score=53.83 Aligned_cols=70 Identities=19% Similarity=0.149 Sum_probs=52.4
Q ss_pred hccCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----hhhHH----HHHHcC--ceecCCCcCCHHh
Q 014834 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (417)
Q Consensus 107 ~l~gmkkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~----s~s~~----~A~~~G--~~~~~~~~~s~~E 174 (417)
.|+| .||++||=| +++.+++..+..- |++|.+..... ..-.+ .|++.| +.. +.+++|
T Consensus 152 ~l~g-l~va~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 220 (335)
T 1dxh_A 152 PLHD-ISYAYLGDARNNMGNSLLLIGAKL------GMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTL----TEDPKE 220 (335)
T ss_dssp CGGG-CEEEEESCCSSHHHHHHHHHHHHT------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEE----ESCHHH
T ss_pred CcCC-eEEEEecCCccchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEE----EeCHHH
Confidence 5788 899999986 9999999999988 99987765431 11222 333667 433 578999
Q ss_pred hcCcCCEEEEccC
Q 014834 175 TISGSDLVLLLIS 187 (417)
Q Consensus 175 a~~~ADIViLavp 187 (417)
+++++|+|...+=
T Consensus 221 av~~aDvvytd~w 233 (335)
T 1dxh_A 221 AVKGVDFVHTDVW 233 (335)
T ss_dssp HTTTCSEEEECCC
T ss_pred HhCCCCEEEeCCc
Confidence 9999999998543
No 323
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=95.71 E-value=0.053 Score=54.07 Aligned_cols=70 Identities=16% Similarity=0.193 Sum_probs=52.5
Q ss_pred hccCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----hhhHH----HHHHcC--ceecCCCcCCHHh
Q 014834 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (417)
Q Consensus 107 ~l~gmkkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~----s~s~~----~A~~~G--~~~~~~~~~s~~E 174 (417)
.|+| .||++||=| +++.+++..+..- |++|.+..... ..-.+ .|++.| +.. +.+++|
T Consensus 152 ~l~g-l~ia~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 220 (333)
T 1duv_G 152 AFNE-MTLVYAGDARNNMGNSMLEAAALT------GLDLRLVAPQACWPEAALVTECRALAQQNGGNITL----TEDVAK 220 (333)
T ss_dssp CGGG-CEEEEESCTTSHHHHHHHHHHHHH------CCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEE----ESCHHH
T ss_pred CCCC-cEEEEECCCccchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEE----EECHHH
Confidence 5778 899999986 9999999999988 99987765431 11222 334677 333 578999
Q ss_pred hcCcCCEEEEccC
Q 014834 175 TISGSDLVLLLIS 187 (417)
Q Consensus 175 a~~~ADIViLavp 187 (417)
++++||+|...+=
T Consensus 221 av~~aDvvytd~w 233 (333)
T 1duv_G 221 GVEGADFIYTDVW 233 (333)
T ss_dssp HHTTCSEEEECCS
T ss_pred HhCCCCEEEeCCc
Confidence 9999999998544
No 324
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.70 E-value=0.022 Score=58.78 Aligned_cols=93 Identities=13% Similarity=0.147 Sum_probs=63.7
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc---EEEEEe----cC----Chhh---H-----HHHHHcCceecC
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGL----RK----GSRS---F-----AEARAAGFTEEN 166 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~---~ViVg~----r~----~s~s---~-----~~A~~~G~~~~~ 166 (417)
..+++ ++|.|+|.|.+|.+++..|.+. |. +|++.+ |+ .... . ..+...+..
T Consensus 182 ~~l~~-~rvlvlGAGgAg~aia~~L~~~------G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~--- 251 (439)
T 2dvm_A 182 KKISE-ITLALFGAGAAGFATLRILTEA------GVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGE--- 251 (439)
T ss_dssp CCTTT-CCEEEECCSHHHHHHHHHHHHT------TCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTT---
T ss_pred CCccC-CEEEEECccHHHHHHHHHHHHc------CCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccc---
Confidence 34677 8999999999999999999998 87 788888 75 2111 1 011111110
Q ss_pred CCcCCHHhhcCcCCEEEEccCC--chHHHHHHHHHhcCCCCcEEEEe
Q 014834 167 GTLGDIYETISGSDLVLLLISD--AAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 167 ~~~~s~~Ea~~~ADIViLavpd--~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
....++.|+++++|+||-++|. ....+ +....|.++.+|.+.
T Consensus 252 ~~~~~L~e~l~~aDVlInaT~~~~G~~~~---e~v~~m~~~~iVfDL 295 (439)
T 2dvm_A 252 NIEGGPQEALKDADVLISFTRPGPGVIKP---QWIEKMNEDAIVFPL 295 (439)
T ss_dssp CCCSSHHHHHTTCSEEEECSCCCSSSSCH---HHHTTSCTTCEEEEC
T ss_pred cccccHHHHhccCCEEEEcCCCccCCCCh---HHHHhcCCCCEEEEC
Confidence 0134688999999999999997 55432 234457777777765
No 325
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=95.70 E-value=0.073 Score=52.64 Aligned_cols=69 Identities=16% Similarity=0.209 Sum_probs=51.8
Q ss_pred hccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC----hhhHH----HHHHcC--ceecCCCcCCHHhh
Q 014834 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYET 175 (417)
Q Consensus 107 ~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~----s~s~~----~A~~~G--~~~~~~~~~s~~Ea 175 (417)
.|+| .||++||= +++..+++..+..- |.+|.+..... ..-.+ .|++.| +.. +.+++|+
T Consensus 152 ~l~g-l~va~vGD~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~----~~d~~ea 220 (315)
T 1pvv_A 152 TIKG-VKVVYVGDGNNVAHSLMIAGTKL------GADVVVATPEGYEPDEKVIKWAEQNAAESGGSFEL----LHDPVKA 220 (315)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEE----ESCHHHH
T ss_pred CcCC-cEEEEECCCcchHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EeCHHHH
Confidence 4788 89999997 79999999999888 99988775432 11222 333667 333 5789999
Q ss_pred cCcCCEEEEcc
Q 014834 176 ISGSDLVLLLI 186 (417)
Q Consensus 176 ~~~ADIViLav 186 (417)
++++|+|+..+
T Consensus 221 v~~aDvvy~~~ 231 (315)
T 1pvv_A 221 VKDADVIYTDV 231 (315)
T ss_dssp TTTCSEEEECC
T ss_pred hCCCCEEEEcc
Confidence 99999999854
No 326
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.66 E-value=0.04 Score=49.53 Aligned_cols=73 Identities=15% Similarity=0.207 Sum_probs=48.9
Q ss_pred CCEEEEEc-ccchHHHHHHHHH-hhhhhhcCCcEEEEEecCCh-hhHHHH-HHcCceecCCCcCC---HHhhcCcCCEEE
Q 014834 111 INQIGVIG-WGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGS-RSFAEA-RAAGFTEENGTLGD---IYETISGSDLVL 183 (417)
Q Consensus 111 mkkIgIIG-~G~mG~AiA~~Lr-~s~~~~~~G~~ViVg~r~~s-~s~~~A-~~~G~~~~~~~~~s---~~Ea~~~ADIVi 183 (417)
||+|.|+| .|.+|.++++.|. +. |++|++..|+.+ +..+.+ ...++......+.+ +.++++++|+||
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv 78 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYT------DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVF 78 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHC------CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcC------CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEE
Confidence 35699999 5999999999999 78 999988877644 322222 11222211111233 456788999999
Q ss_pred EccCCc
Q 014834 184 LLISDA 189 (417)
Q Consensus 184 Lavpd~ 189 (417)
.+....
T Consensus 79 ~~ag~~ 84 (221)
T 3r6d_A 79 VGAMES 84 (221)
T ss_dssp ESCCCC
T ss_pred EcCCCC
Confidence 998764
No 327
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.65 E-value=0.051 Score=53.90 Aligned_cols=92 Identities=14% Similarity=0.125 Sum_probs=55.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC--ChhhHHHHHHc----C------------ceecCCC-----
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEARAA----G------------FTEENGT----- 168 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~--~s~s~~~A~~~----G------------~~~~~~~----- 168 (417)
.||||+|+|.+|.-+++.|.+. .+++|+..++. +........++ | +.. ++.
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~-----~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v-~g~~i~v~ 77 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNS-----GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVI-NGNPITIF 77 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEE-TTEEEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcC-----CCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEE-CCeEEEEE
Confidence 5999999999999999998765 15676544442 22222211121 1 000 000
Q ss_pred -cCCHHhhc---CcCCEEEEccCCchHHHHHHHHHhcCCCCc-EEEEec
Q 014834 169 -LGDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS-ILGLSH 212 (417)
Q Consensus 169 -~~s~~Ea~---~~ADIViLavpd~~~~~Vl~eI~~~lk~ga-iLi~a~ 212 (417)
..+++++- .++|+||.|+|.....+... .+++.|. .|.+++
T Consensus 78 ~~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~---~~l~aGak~V~iSa 123 (335)
T 1u8f_O 78 QERDPSKIKWGDAGAEYVVESTGVFTTMEKAG---AHLQGGAKRVIISA 123 (335)
T ss_dssp CCSSGGGCCTTTTTCCEEEECSSSCCSHHHHG---GGGGGTCSEEEESS
T ss_pred ecCCHHHCccccCCCCEEEECCCchhhHHHHH---HHHhCCCeEEEecc
Confidence 12455541 57899999999988876654 4566674 444444
No 328
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.62 E-value=0.036 Score=57.26 Aligned_cols=90 Identities=17% Similarity=0.251 Sum_probs=54.4
Q ss_pred EEEEEcccchHHHHHHHHHhhh---h-hhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEcc
Q 014834 113 QIGVIGWGSQGPAQAQNLRDSL---A-EAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 113 kIgIIG~G~mG~AiA~~Lr~s~---~-~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLav 186 (417)
+|||||+|.+|..+++.|.+.. . ..+.+++|....+.+....+.. ..+... ..+.+++++ +.|+|+.++
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-~~~~~~----~~d~~ell~d~diDvVve~t 86 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-AGGLPL----TTNPFDVVDDPEIDIVVELI 86 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-HTTCCE----ESCTHHHHTCTTCCEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-cccCcc----cCCHHHHhcCCCCCEEEEcC
Confidence 7999999999999998886421 1 1123555543333322211111 123332 467888886 579999999
Q ss_pred CC-chHHHHHHHHHhcCCCCcEEEE
Q 014834 187 SD-AAQADNYEKIFSCMKPNSILGL 210 (417)
Q Consensus 187 pd-~~~~~Vl~eI~~~lk~gaiLi~ 210 (417)
|+ ..+.++..+ .|+.|+-|+.
T Consensus 87 p~~~~h~~~~~~---AL~aGKhVvt 108 (444)
T 3mtj_A 87 GGLEPARELVMQ---AIANGKHVVT 108 (444)
T ss_dssp CSSTTHHHHHHH---HHHTTCEEEE
T ss_pred CCchHHHHHHHH---HHHcCCEEEE
Confidence 96 667666543 3345665543
No 329
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=95.61 E-value=0.058 Score=53.59 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=52.2
Q ss_pred hccCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----hhhHH----HHHHcC--ceecCCCcCCHHh
Q 014834 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (417)
Q Consensus 107 ~l~gmkkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~----s~s~~----~A~~~G--~~~~~~~~~s~~E 174 (417)
.|+| .||++||=| ++..+++..+... |.+|.+..... ..-.+ .|++.| +.. +.+++|
T Consensus 164 ~l~g-l~va~vGD~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 232 (325)
T 1vlv_A 164 RLKG-VKVVFMGDTRNNVATSLMIACAKM------GMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSF----TSNLEE 232 (325)
T ss_dssp CSTT-CEEEEESCTTSHHHHHHHHHHHHT------TCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEE----ESCHHH
T ss_pred CcCC-cEEEEECCCCcCcHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EcCHHH
Confidence 4788 899999986 9999999999888 99988775431 11222 333667 333 578999
Q ss_pred hcCcCCEEEEccC
Q 014834 175 TISGSDLVLLLIS 187 (417)
Q Consensus 175 a~~~ADIViLavp 187 (417)
+++++|+|...+=
T Consensus 233 av~~aDvvyt~~w 245 (325)
T 1vlv_A 233 ALAGADVVYTDVW 245 (325)
T ss_dssp HHTTCSEEEECCC
T ss_pred HHccCCEEEeccc
Confidence 9999999998543
No 330
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.60 E-value=0.021 Score=58.32 Aligned_cols=74 Identities=19% Similarity=0.192 Sum_probs=53.4
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCC---hhhHHHHHHcCceecCCCcCCHHhhcCc-CCE
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG---SRSFAEARAAGFTEENGTLGDIYETISG-SDL 181 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~---s~s~~~A~~~G~~~~~~~~~s~~Ea~~~-ADI 181 (417)
..++| |+|.|||+|..|.+.|+.|++. |++|.+.++.. +...+..++.|+....+ .+.++...+ +|+
T Consensus 5 ~~~~~-k~v~viG~G~sG~s~A~~l~~~------G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g--~~~~~~~~~~~d~ 75 (451)
T 3lk7_A 5 TTFEN-KKVLVLGLARSGEAAARLLAKL------GAIVTVNDGKPFDENPTAQSLLEEGIKVVCG--SHPLELLDEDFCY 75 (451)
T ss_dssp CTTTT-CEEEEECCTTTHHHHHHHHHHT------TCEEEEEESSCGGGCHHHHHHHHTTCEEEES--CCCGGGGGSCEEE
T ss_pred hhcCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEeCCcccCChHHHHHHhCCCEEEEC--CChHHhhcCCCCE
Confidence 34678 9999999999999999999999 99999888743 23344556678764211 123445566 899
Q ss_pred EEEc--cCC
Q 014834 182 VLLL--ISD 188 (417)
Q Consensus 182 ViLa--vpd 188 (417)
||+. +|+
T Consensus 76 vv~spgi~~ 84 (451)
T 3lk7_A 76 MIKNPGIPY 84 (451)
T ss_dssp EEECTTSCT
T ss_pred EEECCcCCC
Confidence 9985 554
No 331
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.38 E-value=0.034 Score=55.31 Aligned_cols=93 Identities=11% Similarity=0.067 Sum_probs=55.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEec-CChhhHHHHHHcCce--------ecCCCcC--CHHhhcCcC
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFT--------EENGTLG--DIYETISGS 179 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r-~~s~s~~~A~~~G~~--------~~~~~~~--s~~Ea~~~A 179 (417)
.|||||| .|.+|.-+.+.|.+. ..++++...+ ..+.........++. ..+-.+. +.++ +.++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~v 78 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKH-----PYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDV 78 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTC-----SSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTC
T ss_pred cEEEEECcCCHHHHHHHHHHHhC-----CCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCC
Confidence 6899999 899999999988765 1346544432 111111122222211 0000011 3334 4789
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
|+||+|+|.....++..... +.|..|++.++
T Consensus 79 DvVf~atp~~~s~~~a~~~~---~aG~~VId~s~ 109 (350)
T 2ep5_A 79 DVVLSALPNELAESIELELV---KNGKIVVSNAS 109 (350)
T ss_dssp SEEEECCCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CEEEECCChHHHHHHHHHHH---HCCCEEEECCc
Confidence 99999999888877776544 35776777665
No 332
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=95.37 E-value=0.037 Score=56.78 Aligned_cols=69 Identities=22% Similarity=0.208 Sum_probs=50.4
Q ss_pred ccCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 108 FNGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
+..+++|.|||+|-.|.+ +|+-|.+. |++|.+.+...+...+..++.|+....+ .+. +.++.+|+||+.
T Consensus 15 ~~~~~~i~viG~G~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~~g--~~~-~~~~~a~~vv~s 84 (475)
T 1p3d_A 15 MRRVQQIHFIGIGGAGMSGIAEILLNE------GYQISGSDIADGVVTQRLAQAGAKIYIG--HAE-EHIEGASVVVVS 84 (475)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHH------TCEEEEEESCCSHHHHHHHHTTCEEEES--CCG-GGGTTCSEEEEC
T ss_pred cccCCEEEEEeecHHHHHHHHHHHHhC------CCEEEEECCCCCHHHHHHHhCCCEEECC--CCH-HHcCCCCEEEEC
Confidence 344589999999999997 99999998 9999887766544444555678765222 122 346789999885
No 333
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.37 E-value=0.041 Score=52.05 Aligned_cols=87 Identities=15% Similarity=0.214 Sum_probs=55.6
Q ss_pred hhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-------------------hhhHHHHHH-----
Q 014834 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFAEARA----- 159 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~-------------------s~s~~~A~~----- 159 (417)
++.|++ ++|.|||+|-+|..++++|... |+ ++.+.++.. .+....++.
T Consensus 23 q~~l~~-~~VlvvG~GglG~~va~~La~~------Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n 95 (251)
T 1zud_1 23 QQKLLD-SQVLIIGLGGLGTPAALYLAGA------GVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN 95 (251)
T ss_dssp HHHHHT-CEEEEECCSTTHHHHHHHHHHT------TCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred HHHHhc-CcEEEEccCHHHHHHHHHHHHc------CCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC
Confidence 577888 9999999999999999999998 87 566654321 122222211
Q ss_pred cCcee--cCCCc--CCHHhhcCcCCEEEEccCCchHHHHHHHH
Q 014834 160 AGFTE--ENGTL--GDIYETISGSDLVLLLISDAAQADNYEKI 198 (417)
Q Consensus 160 ~G~~~--~~~~~--~s~~Ea~~~ADIViLavpd~~~~~Vl~eI 198 (417)
-++.. ..... .+..+.++++|+||.++........+.+.
T Consensus 96 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~ 138 (251)
T 1zud_1 96 PDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAA 138 (251)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHH
T ss_pred CCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHH
Confidence 12221 01111 12456778899999999876655555554
No 334
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.30 E-value=0.088 Score=46.62 Aligned_cols=69 Identities=16% Similarity=0.190 Sum_probs=47.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC-HHhhcCcCCEEEEccCC
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s-~~Ea~~~ADIViLavpd 188 (417)
|||.|+| .|.+|.++++.|.+. |++|++..|+.++..... .++......+.+ ..+++.++|+||.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR------GHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC------CCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 5799999 599999999999999 999988888754432221 344321111111 11678899999998764
No 335
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=95.29 E-value=0.053 Score=52.68 Aligned_cols=66 Identities=26% Similarity=0.308 Sum_probs=41.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc--EEEEEec--CChhhHHHHHHc--------CceecCCCcCCHHhhcCc
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--VVKVGLR--KGSRSFAEARAA--------GFTEENGTLGDIYETISG 178 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r--~~s~s~~~A~~~--------G~~~~~~~~~s~~Ea~~~ 178 (417)
+||+||| .|.+|.+++..|... |+ ++.+.++ ...+....+.+. .+.. ..+..+++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~------~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v----~~~~~~a~~~ 70 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR------DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRV----RQGGYEDTAG 70 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEE----EECCGGGGTT
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEE----EeCCHHHhCC
Confidence 5899999 999999999999877 65 5655555 222111111110 1111 1123678999
Q ss_pred CCEEEEccC
Q 014834 179 SDLVLLLIS 187 (417)
Q Consensus 179 ADIViLavp 187 (417)
||+||++..
T Consensus 71 aDvVi~~ag 79 (303)
T 1o6z_A 71 SDVVVITAG 79 (303)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEcCC
Confidence 999999865
No 336
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.22 E-value=0.025 Score=54.03 Aligned_cols=74 Identities=20% Similarity=0.167 Sum_probs=50.6
Q ss_pred ccCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc----CceecCCCcCC---HHhhcCcC
Q 014834 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GFTEENGTLGD---IYETISGS 179 (417)
Q Consensus 108 l~gmkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~----G~~~~~~~~~s---~~Ea~~~A 179 (417)
++| +++-|+| .|-+|.+++..|.+. |.+|++.+|+.++..+.+.+. ++......+.+ ..+++++.
T Consensus 117 l~g-k~vlVtGaaGGiG~aia~~L~~~------G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 189 (287)
T 1lu9_A 117 VKG-KKAVVLAGTGPVGMRSAALLAGE------GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGA 189 (287)
T ss_dssp CTT-CEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTC
T ss_pred CCC-CEEEEECCCcHHHHHHHHHHHHC------cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhC
Confidence 678 9999999 999999999999999 999888888755443333321 21110000222 35667778
Q ss_pred CEEEEccCC
Q 014834 180 DLVLLLISD 188 (417)
Q Consensus 180 DIViLavpd 188 (417)
|+||.+++.
T Consensus 190 DvlVn~ag~ 198 (287)
T 1lu9_A 190 HFVFTAGAI 198 (287)
T ss_dssp SEEEECCCT
T ss_pred CEEEECCCc
Confidence 888888863
No 337
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.20 E-value=0.03 Score=51.20 Aligned_cols=74 Identities=14% Similarity=0.191 Sum_probs=49.2
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCC-cEEEEEecCChhhHHHHHHcCceecCCCcCC---HHhhcCcCCEEEEc
Q 014834 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLL 185 (417)
Q Consensus 111 mkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G-~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s---~~Ea~~~ADIViLa 185 (417)
||+|.|.| .|.+|.++++.|.+. | ++|++..|+.++..+. ...++......+.+ ++++++++|+||.+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~------G~~~V~~~~R~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~ 95 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADK------QTIKQTLFARQPAKIHKP-YPTNSQIIMGDVLNHAALKQAMQGQDIVYAN 95 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC------TTEEEEEEESSGGGSCSS-CCTTEEEEECCTTCHHHHHHHHTTCSEEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhC------CCceEEEEEcChhhhccc-ccCCcEEEEecCCCHHHHHHHhcCCCEEEEc
Confidence 38899999 699999999999998 9 8888877764432111 11122211111233 45678899999988
Q ss_pred cCCchH
Q 014834 186 ISDAAQ 191 (417)
Q Consensus 186 vpd~~~ 191 (417)
......
T Consensus 96 a~~~~~ 101 (236)
T 3qvo_A 96 LTGEDL 101 (236)
T ss_dssp CCSTTH
T ss_pred CCCCch
Confidence 765443
No 338
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=95.19 E-value=0.082 Score=53.22 Aligned_cols=70 Identities=16% Similarity=0.156 Sum_probs=52.4
Q ss_pred hccCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecC----ChhhHH----HHHHcC--ceecCCCcCCHHh
Q 014834 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFA----EARAAG--FTEENGTLGDIYE 174 (417)
Q Consensus 107 ~l~gmkkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~----~s~s~~----~A~~~G--~~~~~~~~~s~~E 174 (417)
.|+| .||++||=| +++.+++..+..- |++|.+.... +....+ .|++.| +.. +.+++|
T Consensus 173 ~l~g-l~va~vGD~~~rva~Sl~~~~~~l------G~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 241 (359)
T 2w37_A 173 KLQG-LTLTFMGDGRNNVANSLLVTGAIL------GVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVI----TDDLDE 241 (359)
T ss_dssp CCTT-CEEEEESCTTSHHHHHHHHHHHHH------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEE----ESCHHH
T ss_pred CcCC-eEEEEECCCccchHHHHHHHHHHc------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EeCHHH
Confidence 4788 899999986 9999999999988 9998776543 112222 233566 443 578999
Q ss_pred hcCcCCEEEEccC
Q 014834 175 TISGSDLVLLLIS 187 (417)
Q Consensus 175 a~~~ADIViLavp 187 (417)
++++||+|...+=
T Consensus 242 av~~aDvvytd~w 254 (359)
T 2w37_A 242 GLKGSNVVYTDVW 254 (359)
T ss_dssp HHTTCSEEEECCS
T ss_pred HhcCCCEEEEccc
Confidence 9999999998553
No 339
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.11 E-value=0.014 Score=58.47 Aligned_cols=22 Identities=32% Similarity=0.364 Sum_probs=20.2
Q ss_pred CEEEEEcccchHHHHHHHHHhh
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDS 133 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s 133 (417)
.+|||||+|.||..++..|.+.
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~ 26 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAM 26 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC
T ss_pred EEEEEEecCHHHHHHHHHHHhc
Confidence 5899999999999999999875
No 340
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=95.09 E-value=0.14 Score=51.23 Aligned_cols=69 Identities=12% Similarity=0.159 Sum_probs=50.4
Q ss_pred hccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecC----ChhhHHH----HHHcC--ceecCCCcCCHHhh
Q 014834 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAE----ARAAG--FTEENGTLGDIYET 175 (417)
Q Consensus 107 ~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~----~s~s~~~----A~~~G--~~~~~~~~~s~~Ea 175 (417)
.|+| .||+|||= +++..+++..+..- |.+|.+.... +..-.+. |++.| +.. +.+++|+
T Consensus 176 ~l~g-lkva~vGD~~nva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~----~~d~~ea 244 (340)
T 4ep1_A 176 TFKG-IKLAYVGDGNNVCHSLLLASAKV------GMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEI----LHNPELA 244 (340)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEE----ESCHHHH
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEE----ECCHHHH
Confidence 3788 99999996 47889999988887 9988776543 2222222 33566 333 5789999
Q ss_pred cCcCCEEEEcc
Q 014834 176 ISGSDLVLLLI 186 (417)
Q Consensus 176 ~~~ADIViLav 186 (417)
+++||+|+..+
T Consensus 245 v~~aDVvyt~~ 255 (340)
T 4ep1_A 245 VNEADFIYTDV 255 (340)
T ss_dssp HTTCSEEEECC
T ss_pred hCCCCEEEecC
Confidence 99999999865
No 341
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.03 E-value=0.051 Score=56.27 Aligned_cols=69 Identities=17% Similarity=0.165 Sum_probs=52.6
Q ss_pred CCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc--cC
Q 014834 111 INQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL--IS 187 (417)
Q Consensus 111 mkkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa--vp 187 (417)
+|+|-|||.|-.|.+ +|+-|++. |++|.+.+...+...+..++.|+... .....+.+.++|+||+. +|
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~---~g~~~~~~~~~d~vV~Spgi~ 92 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANE------GYQISGSDLAPNSVTQHLTALGAQIY---FHHRPENVLDASVVVVSTAIS 92 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT------TCEEEEECSSCCHHHHHHHHTTCEEE---SSCCGGGGTTCSEEEECTTSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHCCCEEE---CCCCHHHcCCCCEEEECCCCC
Confidence 489999999999996 89999999 99998887665555566667888753 22233456789999985 55
Q ss_pred C
Q 014834 188 D 188 (417)
Q Consensus 188 d 188 (417)
+
T Consensus 93 ~ 93 (494)
T 4hv4_A 93 A 93 (494)
T ss_dssp T
T ss_pred C
Confidence 4
No 342
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=95.02 E-value=0.065 Score=52.57 Aligned_cols=70 Identities=11% Similarity=0.076 Sum_probs=43.9
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCc-------EEEEEecC----ChhhHHHHH--HcC---ceecCCCcCCHHh
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKVGLRK----GSRSFAEAR--AAG---FTEENGTLGDIYE 174 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~-------~ViVg~r~----~s~s~~~A~--~~G---~~~~~~~~~s~~E 174 (417)
+||+|||. |.+|.+++..|... |+ +|.+.++. ..+....+. ..+ +...-....+..+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~------~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~ 79 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG------DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMT 79 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT------TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHH
Confidence 69999998 99999999999887 64 56655443 111111111 111 1100001246788
Q ss_pred hcCcCCEEEEccC
Q 014834 175 TISGSDLVLLLIS 187 (417)
Q Consensus 175 a~~~ADIViLavp 187 (417)
++++||+||++..
T Consensus 80 al~~aD~Vi~~ag 92 (329)
T 1b8p_A 80 AFKDADVALLVGA 92 (329)
T ss_dssp HTTTCSEEEECCC
T ss_pred HhCCCCEEEEeCC
Confidence 9999999999753
No 343
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=94.92 E-value=0.13 Score=50.92 Aligned_cols=69 Identities=14% Similarity=0.205 Sum_probs=50.2
Q ss_pred hccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecC----ChhhHHH----HHHcC--ceecCCCcCCHHhh
Q 014834 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAE----ARAAG--FTEENGTLGDIYET 175 (417)
Q Consensus 107 ~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~----~s~s~~~----A~~~G--~~~~~~~~~s~~Ea 175 (417)
.|+| .||++||= +++..+++..+..- |++|.+.... +....+. +++.| +.. +.+++|+
T Consensus 154 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~----~~d~~ea 222 (323)
T 3gd5_A 154 RLAG-LKLAYVGDGNNVAHSLLLGCAKV------GMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQI----LRDPFEA 222 (323)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEE----ESCHHHH
T ss_pred CCCC-CEEEEECCCCcHHHHHHHHHHHc------CCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEE----ECCHHHH
Confidence 4788 99999995 58899999998887 9988776543 2222222 33445 333 5789999
Q ss_pred cCcCCEEEEcc
Q 014834 176 ISGSDLVLLLI 186 (417)
Q Consensus 176 ~~~ADIViLav 186 (417)
++++|+|+..+
T Consensus 223 v~~aDvvyt~~ 233 (323)
T 3gd5_A 223 ARGAHILYTDV 233 (323)
T ss_dssp HTTCSEEEECC
T ss_pred hcCCCEEEEec
Confidence 99999999875
No 344
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=94.90 E-value=0.17 Score=51.04 Aligned_cols=69 Identities=13% Similarity=0.017 Sum_probs=49.4
Q ss_pred ccCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC------hhhHH----HHHHcCceecCCCcCCHHhh
Q 014834 108 FNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG------SRSFA----EARAAGFTEENGTLGDIYET 175 (417)
Q Consensus 108 l~gmkkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~------s~s~~----~A~~~G~~~~~~~~~s~~Ea 175 (417)
|+| .||++||=+ +++.+++..+..- |++|.+..... +...+ .+.+.|.... .+.+++|+
T Consensus 178 l~g-lkva~vGD~~nnva~Sl~~~~~~l------G~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~--~~~d~~ea 248 (365)
T 4amu_A 178 LKN-KKIVFIGDYKNNVGVSTMIGAAFN------GMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLR--FSTDKILA 248 (365)
T ss_dssp CTT-CEEEEESSTTSHHHHHHHHHHHHT------TCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEE--EESCHHHH
T ss_pred CCC-CEEEEECCCCcchHHHHHHHHHHc------CCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEE--EECCHHHH
Confidence 788 999999988 7888998888877 99887765431 11122 2345563210 15789999
Q ss_pred cCcCCEEEEc
Q 014834 176 ISGSDLVLLL 185 (417)
Q Consensus 176 ~~~ADIViLa 185 (417)
+++||+|..-
T Consensus 249 v~~aDVVytd 258 (365)
T 4amu_A 249 AQDADVIYTD 258 (365)
T ss_dssp TTTCSEEEEC
T ss_pred hcCCCEEEec
Confidence 9999999984
No 345
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.87 E-value=0.068 Score=50.12 Aligned_cols=82 Identities=23% Similarity=0.286 Sum_probs=54.1
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhh--HHHH------HHcCceecCCCcCC---HHhhcCc
Q 014834 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS--FAEA------RAAGFTEENGTLGD---IYETISG 178 (417)
Q Consensus 111 mkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s--~~~A------~~~G~~~~~~~~~s---~~Ea~~~ 178 (417)
|++|.|+|. |.+|.++++.|.+. |++|++..|..+.. .+.+ ...|+....+.+.+ +.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 77 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL------GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKN 77 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC------CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcC
Confidence 488999996 99999999999999 99888777763221 1111 23455432222333 4567889
Q ss_pred CCEEEEccCCc---hHHHHHHHH
Q 014834 179 SDLVLLLISDA---AQADNYEKI 198 (417)
Q Consensus 179 ADIViLavpd~---~~~~Vl~eI 198 (417)
+|+||.+.... .+..+++..
T Consensus 78 ~d~vi~~a~~~~~~~~~~l~~aa 100 (308)
T 1qyc_A 78 VDVVISTVGSLQIESQVNIIKAI 100 (308)
T ss_dssp CSEEEECCCGGGSGGGHHHHHHH
T ss_pred CCEEEECCcchhhhhHHHHHHHH
Confidence 99999998753 234455543
No 346
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=94.83 E-value=0.057 Score=53.19 Aligned_cols=76 Identities=14% Similarity=0.191 Sum_probs=58.5
Q ss_pred hhccCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEE
Q 014834 106 DAFNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G-~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViL 184 (417)
..++| |++.|||-+ ..|.++|.-|.+. +..|.+.... +.++.+.+++||+||.
T Consensus 175 i~l~G-k~vvViGRS~iVGkPla~LL~~~------~ATVTi~Hs~-------------------T~dl~~~~~~ADIvV~ 228 (303)
T 4b4u_A 175 IEIAG-KHAVVVGRSAILGKPMAMMLLQA------NATVTICHSR-------------------TQNLPELVKQADIIVG 228 (303)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHHTCSEEEE
T ss_pred CCCCC-CEEEEEeccccccchHHHHHHhc------CCEEEEecCC-------------------CCCHHHHhhcCCeEEe
Confidence 46889 999999977 6799999999988 8888766432 2367788999999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
++.-... +. ..++|+|++|++++
T Consensus 229 A~G~p~~---i~--~d~vk~GavVIDVG 251 (303)
T 4b4u_A 229 AVGKAEL---IQ--KDWIKQGAVVVDAG 251 (303)
T ss_dssp CSCSTTC---BC--GGGSCTTCEEEECC
T ss_pred ccCCCCc---cc--cccccCCCEEEEec
Confidence 9874322 21 34689999999864
No 347
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=94.82 E-value=0.033 Score=55.76 Aligned_cols=90 Identities=17% Similarity=0.152 Sum_probs=55.5
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCC-----c-EEEEEecCCh--hhHHHH----HH-cCceecCCCcCCHHhhc
Q 014834 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-----I-VVKVGLRKGS--RSFAEA----RA-AGFTEENGTLGDIYETI 176 (417)
Q Consensus 111 mkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G-----~-~ViVg~r~~s--~s~~~A----~~-~G~~~~~~~~~s~~Ea~ 176 (417)
|+||+||| .|.+|..+.+.|.+. + . +++...+..+ +..... .. ...... -.+. +.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~------~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~---~~~~-~~~ 78 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGH------PAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE---PTEA-AVL 78 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC------HHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE---ECCH-HHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC------CCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec---cCCH-HHh
Confidence 37999999 999999999999876 5 3 5544433211 211100 00 011110 1233 345
Q ss_pred CcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 177 ~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
.++|+||+|+|.....++.+.+ +.|..+++.++.
T Consensus 79 ~~~DvVf~alg~~~s~~~~~~~----~~G~~vIDlSa~ 112 (352)
T 2nqt_A 79 GGHDAVFLALPHGHSAVLAQQL----SPETLIIDCGAD 112 (352)
T ss_dssp TTCSEEEECCTTSCCHHHHHHS----CTTSEEEECSST
T ss_pred cCCCEEEECCCCcchHHHHHHH----hCCCEEEEECCC
Confidence 6899999999988777766544 467778876653
No 348
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.72 E-value=0.11 Score=48.65 Aligned_cols=82 Identities=18% Similarity=0.184 Sum_probs=54.1
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC-------hhhHH--HHHHcCceecCCCcCC---HHhhcC
Q 014834 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-------SRSFA--EARAAGFTEENGTLGD---IYETIS 177 (417)
Q Consensus 111 mkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~-------s~s~~--~A~~~G~~~~~~~~~s---~~Ea~~ 177 (417)
|++|.|+|. |.+|.++++.|.+. |++|++..|+. ++... .....|+....+.+.+ +.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~ 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA------GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH------TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT
T ss_pred CcEEEEECCCchHHHHHHHHHHhC------CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh
Confidence 388999996 99999999999999 99988877764 21111 1123455432122333 456788
Q ss_pred cCCEEEEccCCc---hHHHHHHHH
Q 014834 178 GSDLVLLLISDA---AQADNYEKI 198 (417)
Q Consensus 178 ~ADIViLavpd~---~~~~Vl~eI 198 (417)
++|+||.+.... .+..+++..
T Consensus 76 ~~d~vi~~a~~~~~~~~~~l~~aa 99 (307)
T 2gas_A 76 QVDIVICAAGRLLIEDQVKIIKAI 99 (307)
T ss_dssp TCSEEEECSSSSCGGGHHHHHHHH
T ss_pred CCCEEEECCcccccccHHHHHHHH
Confidence 999999998753 233455443
No 349
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.69 E-value=0.11 Score=46.52 Aligned_cols=69 Identities=16% Similarity=0.196 Sum_probs=48.2
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC----HHhhcCcCCEEEEcc
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD----IYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s----~~Ea~~~ADIViLav 186 (417)
|||.|+| .|.+|.++++.|.+. |++|++..|..++..+. .++....+.+.+ +.+++++.|+||.+.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT------DYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS------SCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 4899999 799999999999999 99998888864432111 233221122333 456788999999987
Q ss_pred CCc
Q 014834 187 SDA 189 (417)
Q Consensus 187 pd~ 189 (417)
...
T Consensus 72 g~~ 74 (219)
T 3dqp_A 72 GSG 74 (219)
T ss_dssp CCT
T ss_pred cCC
Confidence 643
No 350
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=94.65 E-value=0.13 Score=50.74 Aligned_cols=71 Identities=14% Similarity=0.080 Sum_probs=50.4
Q ss_pred hcc-CCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecC----ChhhHHHH----HHcCceecCCCcCCHHhhc
Q 014834 107 AFN-GINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEA----RAAGFTEENGTLGDIYETI 176 (417)
Q Consensus 107 ~l~-gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~----~s~s~~~A----~~~G~~~~~~~~~s~~Ea~ 176 (417)
.++ | .||++||= +++..+++..+... |.+|.+.... +....+.+ ++.|.... .+.+++|++
T Consensus 142 ~l~~g-l~va~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~--~~~d~~eav 212 (307)
T 3tpf_A 142 MQNGI-AKVAFIGDSNNMCNSWLITAAIL------GFEISIAMPKNYKISPEIWEFAMKQALISGAKIS--LGYDKFEAL 212 (307)
T ss_dssp CGGGC-CEEEEESCSSHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EESCHHHHH
T ss_pred CCCCC-CEEEEEcCCCccHHHHHHHHHHc------CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEE--EEcCHHHHh
Confidence 467 8 99999996 48899999988887 9988776543 12222323 35553310 157899999
Q ss_pred CcCCEEEEcc
Q 014834 177 SGSDLVLLLI 186 (417)
Q Consensus 177 ~~ADIViLav 186 (417)
+++|+|...+
T Consensus 213 ~~aDvvyt~~ 222 (307)
T 3tpf_A 213 KDKDVVITDT 222 (307)
T ss_dssp TTCSEEEECC
T ss_pred cCCCEEEecC
Confidence 9999999876
No 351
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.64 E-value=0.13 Score=44.94 Aligned_cols=70 Identities=23% Similarity=0.306 Sum_probs=47.6
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC---HHhhcCcCCEEEEccC
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s---~~Ea~~~ADIViLavp 187 (417)
|+|.|+|. |.+|.++++.|.+. |++|++..|+.++.... ...++......+.+ +.++++++|+||.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~------g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA------GYEVTVLVRDSSRLPSE-GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCGGGSCSS-SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC------CCeEEEEEeChhhcccc-cCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 78999998 99999999999999 99998887764332110 01233211111233 4567889999999876
Q ss_pred C
Q 014834 188 D 188 (417)
Q Consensus 188 d 188 (417)
.
T Consensus 77 ~ 77 (206)
T 1hdo_A 77 T 77 (206)
T ss_dssp C
T ss_pred C
Confidence 4
No 352
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.60 E-value=0.2 Score=44.60 Aligned_cols=70 Identities=20% Similarity=0.119 Sum_probs=47.1
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC-HHhhcCcCCEEEEccCC
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s-~~Ea~~~ADIViLavpd 188 (417)
|||.|+|. |.+|.++++.|.+. |++|++..|+.++ .......++....+.+.+ ..+++.++|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR------GHEVLAVVRDPQK-AADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC------CCEEEEEEecccc-cccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 47999997 99999999999999 9999888776433 222222344321111111 11678899999998754
No 353
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.57 E-value=0.1 Score=49.39 Aligned_cols=81 Identities=21% Similarity=0.174 Sum_probs=54.3
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHH---HHHHcCceecCCCcCC---HHhhcCcCCEEEE
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFA---EARAAGFTEENGTLGD---IYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~---~A~~~G~~~~~~~~~s---~~Ea~~~ADIViL 184 (417)
++|.|+|. |.+|.++++.|.+. |++|++..|+.+...+ .....|+....+.+.+ +.++++++|+||.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~ 85 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL------GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVIS 85 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHC------CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 58999995 99999999999999 9998887776432221 1123565432222333 4567889999999
Q ss_pred ccCCc---hHHHHHHHH
Q 014834 185 LISDA---AQADNYEKI 198 (417)
Q Consensus 185 avpd~---~~~~Vl~eI 198 (417)
+.... .+..+++..
T Consensus 86 ~a~~~~~~~~~~l~~aa 102 (318)
T 2r6j_A 86 ALAFPQILDQFKILEAI 102 (318)
T ss_dssp CCCGGGSTTHHHHHHHH
T ss_pred CCchhhhHHHHHHHHHH
Confidence 98753 234455443
No 354
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=94.56 E-value=0.098 Score=51.84 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=48.5
Q ss_pred hccCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCcEEEEEecCC----hhhHHH----HHHcC--ceecCCCcCCHHhh
Q 014834 107 AFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAG--FTEENGTLGDIYET 175 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~----s~s~~~----A~~~G--~~~~~~~~~s~~Ea 175 (417)
.|+| .||++||=|+ +..+++..+..- |.+|.+..... ..-.+. +++.| +.. +.+++|+
T Consensus 152 ~l~g-l~va~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~----~~d~~ea 220 (321)
T 1oth_A 152 SLKG-LTLSWIGDGNNILHSIMMSAAKF------GMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLL----TNDPLEA 220 (321)
T ss_dssp CCTT-CEEEEESCSSHHHHHHHTTTGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEE----ESCHHHH
T ss_pred CcCC-cEEEEECCchhhHHHHHHHHHHc------CCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EECHHHH
Confidence 4788 8999999864 777777777666 99887765432 111222 22455 343 5789999
Q ss_pred cCcCCEEEEcc
Q 014834 176 ISGSDLVLLLI 186 (417)
Q Consensus 176 ~~~ADIViLav 186 (417)
++++|+|+.-+
T Consensus 221 v~~aDvvy~d~ 231 (321)
T 1oth_A 221 AHGGNVLITDT 231 (321)
T ss_dssp HTTCSEEEECC
T ss_pred hccCCEEEEec
Confidence 99999999955
No 355
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=94.52 E-value=0.2 Score=49.26 Aligned_cols=70 Identities=14% Similarity=0.040 Sum_probs=50.9
Q ss_pred hccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCh-hhHHHHHHcCceecCCCcCCHHhhcCcCCEEEE
Q 014834 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 107 ~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s-~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViL 184 (417)
.|+| .||++||= +++..+++..+... |.+|.+.....- ...+.....++.. +.+++|+++++|+|..
T Consensus 151 ~l~g-l~ia~vGD~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~~----~~d~~eav~~aDvvy~ 219 (301)
T 2ef0_A 151 GLAG-LEVAWVGDGNNVLNSLLEVAPLA------GLKVRVATPKGYEPDPGLLKRANAFF----THDPKEAALGAHALYT 219 (301)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHTCEE----ESCHHHHHTTCSEEEE
T ss_pred CcCC-cEEEEECCCchhHHHHHHHHHHc------CCEEEEECCchhcCCHHHHhhceeEE----ECCHHHHhcCCCEEEe
Confidence 4788 89999997 79999999999988 999877754321 1111111223554 6789999999999998
Q ss_pred ccC
Q 014834 185 LIS 187 (417)
Q Consensus 185 avp 187 (417)
.+=
T Consensus 220 ~~~ 222 (301)
T 2ef0_A 220 DVW 222 (301)
T ss_dssp CCC
T ss_pred cCc
Confidence 554
No 356
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=94.49 E-value=0.096 Score=51.60 Aligned_cols=69 Identities=22% Similarity=0.249 Sum_probs=51.9
Q ss_pred hccCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCC----hhhHH----HHHHcC--ceecCCCcCCHHh
Q 014834 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (417)
Q Consensus 107 ~l~gmkkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~----s~s~~----~A~~~G--~~~~~~~~~s~~E 174 (417)
.|+| .||++||=| ++..+++..+... |++|.+..... ..-.+ .+++.| +.. +.+++|
T Consensus 145 ~l~g-l~va~vGD~~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~----~~d~~e 213 (307)
T 2i6u_A 145 ALRG-LRLSYFGDGANNMAHSLLLGGVTA------GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTV----TADAHA 213 (307)
T ss_dssp CCTT-CEEEEESCTTSHHHHHHHHHHHHT------TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEE----ESCHHH
T ss_pred CcCC-eEEEEECCCCcCcHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EECHHH
Confidence 4778 899999986 9999999999988 99988775432 11222 233667 443 578999
Q ss_pred hcCcCCEEEEcc
Q 014834 175 TISGSDLVLLLI 186 (417)
Q Consensus 175 a~~~ADIViLav 186 (417)
+++++|+|+..+
T Consensus 214 av~~aDvvy~~~ 225 (307)
T 2i6u_A 214 AAAGADVLVTDT 225 (307)
T ss_dssp HHTTCSEEEECC
T ss_pred HhcCCCEEEecc
Confidence 999999999854
No 357
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=94.48 E-value=0.13 Score=51.18 Aligned_cols=94 Identities=14% Similarity=0.135 Sum_probs=54.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC--ChhhHHHHH----HcCc-----ee--cC------C-C---
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEAR----AAGF-----TE--EN------G-T--- 168 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~--~s~s~~~A~----~~G~-----~~--~~------~-~--- 168 (417)
.||||+|+|.+|.-+++.|.+. .+++|+..++. +........ ..|- .. .+ + .
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~-----p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v 78 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQS-----EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTV 78 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----SSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCC-----CCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEE
Confidence 4999999999999999998764 14566544442 222111211 1121 00 00 0 0
Q ss_pred c--CCHHhhc---CcCCEEEEccCCchHHHHHHHHHhcCCCCc--EEEEecC
Q 014834 169 L--GDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (417)
Q Consensus 169 ~--~s~~Ea~---~~ADIViLavpd~~~~~Vl~eI~~~lk~ga--iLi~a~G 213 (417)
. .+++++- .++|+||.|+|.....+..... ++.|. +|+.+++
T Consensus 79 ~~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~---l~aGak~VVIs~pa 127 (337)
T 3e5r_O 79 FGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAH---LKGGAKKVVISAPS 127 (337)
T ss_dssp ECCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHH---HHTTCSEEEESSCC
T ss_pred EecCChHHccccccCCCEEEECCCchhhHHHHHHH---HHcCCCEEEEecCC
Confidence 1 1444431 4799999999998887766554 34465 6654443
No 358
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=94.41 E-value=0.074 Score=52.49 Aligned_cols=93 Identities=13% Similarity=0.071 Sum_probs=53.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC--cEEE-EEecCChhhHH------HHH---HcCceecCCCcC---CHHhhc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVK-VGLRKGSRSFA------EAR---AAGFTEENGTLG---DIYETI 176 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G--~~Vi-Vg~r~~s~s~~------~A~---~~G~~~~~~~~~---s~~Ea~ 176 (417)
.+|||||+|.||..++..|.+.-.....| ++|+ |.+++..+..+ .+. ..++.. ... +.++++
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~ll 83 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDS---LEYESISASEAL 83 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGG---CCSEECCHHHHH
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCccc---ccCCCCCHHHHh
Confidence 47999999999999999997751101113 4443 44444322111 111 123210 023 777776
Q ss_pred -CcCCEEEEccCCc----hHHHHHHHHHhcCCCCcEEEE
Q 014834 177 -SGSDLVLLLISDA----AQADNYEKIFSCMKPNSILGL 210 (417)
Q Consensus 177 -~~ADIViLavpd~----~~~~Vl~eI~~~lk~gaiLi~ 210 (417)
.+.|+|+.|+|+. .+.+++.+ .|+.|+-|+.
T Consensus 84 ~~~iDvVv~~t~~~~~~~~~~~~~~~---AL~aGkhVvt 119 (331)
T 3c8m_A 84 ARDFDIVVDATPASADGKKELAFYKE---TFENGKDVVT 119 (331)
T ss_dssp HSSCSEEEECSCCCSSSHHHHHHHHH---HHHTTCEEEE
T ss_pred CCCCCEEEECCCCCCccchHHHHHHH---HHHCCCeEEe
Confidence 4689999999986 44445443 3456775553
No 359
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=94.38 E-value=0.25 Score=49.94 Aligned_cols=69 Identities=22% Similarity=0.162 Sum_probs=41.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc-----EEEEEecCChhh----HHHHH--HcCceec--C-CCcCCHHhhc
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI-----VVKVGLRKGSRS----FAEAR--AAGFTEE--N-GTLGDIYETI 176 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~-----~ViVg~r~~s~s----~~~A~--~~G~~~~--~-~~~~s~~Ea~ 176 (417)
.||+||| .|.+|.+++..|... ++ .+.+.+...... .-.+. .++..+. + ....+..+++
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~------~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~ 106 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASG------EVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVF 106 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHcC------CcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHh
Confidence 6999999 799999999999887 54 254443221221 11222 1222100 0 0023567889
Q ss_pred CcCCEEEEcc
Q 014834 177 SGSDLVLLLI 186 (417)
Q Consensus 177 ~~ADIViLav 186 (417)
++||+||++-
T Consensus 107 ~daDvVVita 116 (375)
T 7mdh_A 107 EDVDWALLIG 116 (375)
T ss_dssp TTCSEEEECC
T ss_pred CCCCEEEEcC
Confidence 9999999963
No 360
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.37 E-value=0.087 Score=51.31 Aligned_cols=89 Identities=19% Similarity=0.236 Sum_probs=63.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd 188 (417)
.| .+|.|+|.|.+|...++-++.. |.+|++..++. ...+.+++.|.... ..+.+++.+..|+||-++..
T Consensus 176 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~~-~~~~~~~~lGa~~v---~~~~~~~~~~~D~vid~~g~ 244 (348)
T 3two_A 176 KG-TKVGVAGFGGLGSMAVKYAVAM------GAEVSVFARNE-HKKQDALSMGVKHF---YTDPKQCKEELDFIISTIPT 244 (348)
T ss_dssp TT-CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSSS-TTHHHHHHTTCSEE---ESSGGGCCSCEEEEEECCCS
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCeEEEEeCCH-HHHHHHHhcCCCee---cCCHHHHhcCCCEEEECCCc
Confidence 56 8999999999999999999988 99887666554 45678888887531 23334444478999999886
Q ss_pred chHHHHHHHHHhcCCCCcEEEEe
Q 014834 189 AAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
.. .++.....++++-.++..
T Consensus 245 ~~---~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 245 HY---DLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp CC---CHHHHHTTEEEEEEEEEC
T ss_pred HH---HHHHHHHHHhcCCEEEEE
Confidence 52 233444566776665544
No 361
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=94.37 E-value=0.22 Score=47.01 Aligned_cols=75 Identities=20% Similarity=0.171 Sum_probs=49.3
Q ss_pred hhccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH------cCceec-CCCc---CCHHh
Q 014834 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA------AGFTEE-NGTL---GDIYE 174 (417)
Q Consensus 106 ~~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~------~G~~~~-~~~~---~s~~E 174 (417)
..++| ++|.|.|. |-+|.++++.|.+. |++|++..|..++....... .++... ...+ .+.++
T Consensus 7 ~~~~~-~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~ 79 (342)
T 1y1p_A 7 VLPEG-SLVLVTGANGFVASHVVEQLLEH------GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE 79 (342)
T ss_dssp SSCTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT
T ss_pred cCCCC-CEEEEECCccHHHHHHHHHHHHC------CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHH
Confidence 44667 89999997 99999999999999 99998777764332211111 122210 0111 23456
Q ss_pred hcCcCCEEEEccC
Q 014834 175 TISGSDLVLLLIS 187 (417)
Q Consensus 175 a~~~ADIViLavp 187 (417)
++++.|+||.+..
T Consensus 80 ~~~~~d~vih~A~ 92 (342)
T 1y1p_A 80 VIKGAAGVAHIAS 92 (342)
T ss_dssp TTTTCSEEEECCC
T ss_pred HHcCCCEEEEeCC
Confidence 6778999998764
No 362
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.36 E-value=0.058 Score=53.53 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=52.1
Q ss_pred CEEEEEcccchHHHHHHHHHhh---hhhhcCCcEEE-EEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDS---LAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s---~~~~~~G~~Vi-Vg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavp 187 (417)
.||||||+|.+|..+++.|.+. +.+.|.+++++ |.+++..+ + .++.. .....|.++++ +.|+|+.|+|
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~----~--~~~~~-~~~~~d~~~ll-~iDvVve~t~ 75 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRK----P--RAIPQ-ELLRAEPFDLL-EADLVVEAMG 75 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTS----C--CSSCG-GGEESSCCCCT-TCSEEEECCC
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHH----h--hccCc-ccccCCHHHHh-CCCEEEECCC
Confidence 4799999999999999998775 11111134443 33443221 1 12211 11145777888 8999999999
Q ss_pred CchH-HHHHHHHHhcCCCCcEEEE
Q 014834 188 DAAQ-ADNYEKIFSCMKPNSILGL 210 (417)
Q Consensus 188 d~~~-~~Vl~eI~~~lk~gaiLi~ 210 (417)
...+ .+...+ .|+.|+-|+.
T Consensus 76 ~~~~a~~~~~~---AL~aGKhVVt 96 (332)
T 2ejw_A 76 GVEAPLRLVLP---ALEAGIPLIT 96 (332)
T ss_dssp CSHHHHHHHHH---HHHTTCCEEE
T ss_pred CcHHHHHHHHH---HHHcCCeEEE
Confidence 7754 344433 3445665543
No 363
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.28 E-value=0.1 Score=50.84 Aligned_cols=93 Identities=18% Similarity=0.180 Sum_probs=61.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCcee-cCCCcCCHHhhc------CcCC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTE-ENGTLGDIYETI------SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~-~~~~~~s~~Ea~------~~AD 180 (417)
.| ++|.|+|.|.+|...++-++.. |. +|++..++ +...+.+++.|... .+....+..+.+ ...|
T Consensus 167 ~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 167 SG-KSVLITGAGPLGLLGIAVAKAS------GAYPVIVSEPS-DFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHT------TCCSEEEECSC-HHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCC-HHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCC
Confidence 67 8999999999999999999988 98 78766655 44567777888532 011112333322 2589
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+||-++... +.++...+.++++-.++..+
T Consensus 239 ~vid~~g~~---~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 239 VFLEFSGAP---KALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEEECSCCH---HHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCCH---HHHHHHHHHHhcCCEEEEEc
Confidence 999998852 23444455566665555443
No 364
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=94.27 E-value=0.13 Score=50.42 Aligned_cols=71 Identities=23% Similarity=0.171 Sum_probs=42.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH--cC-c--eecCCCc-CCHHhhcCcCCEEEE
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA--AG-F--TEENGTL-GDIYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~--~G-~--~~~~~~~-~s~~Ea~~~ADIViL 184 (417)
+||+||| .|.+|.+++..|.... +...++.+.+... +..-.+.+ .. . .. .+.. .+..+++++||+||+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~---~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v-~~~~~~~~~~~~~~aDivii 75 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQL---PSGSELSLYDIAP-VTPGVAVDLSHIPTAVKI-KGFSGEDATPALEGADVVLI 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHS---CTTEEEEEECSST-THHHHHHHHHTSCSSEEE-EEECSSCCHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CCCceEEEEecCC-CchhHHHHhhCCCCCceE-EEecCCCcHHHhCCCCEEEE
Confidence 5899999 8999999999987530 0123666555543 22222221 11 1 11 0000 245678999999999
Q ss_pred ccC
Q 014834 185 LIS 187 (417)
Q Consensus 185 avp 187 (417)
+..
T Consensus 76 ~ag 78 (312)
T 3hhp_A 76 SAG 78 (312)
T ss_dssp CCS
T ss_pred eCC
Confidence 863
No 365
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.21 E-value=0.094 Score=51.51 Aligned_cols=93 Identities=17% Similarity=0.210 Sum_probs=62.1
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCh--hhHHHHHHcCceecCCCcCCHHhhc----CcCC
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDIYETI----SGSD 180 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s--~s~~~A~~~G~~~~~~~~~s~~Ea~----~~AD 180 (417)
.++| ++|.|+|.|.+|...++.++.. |.+|++..++.. ...+.+++.|....| .. +..+.+ ...|
T Consensus 178 ~~~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 178 TLNC-RKVLVVGTGPIGVLFTLLFRTY------GLEVWMANRREPTEVEQTVIEETKTNYYN-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp SSTT-CEEEEESCHHHHHHHHHHHHHH------TCEEEEEESSCCCHHHHHHHHHHTCEEEE-CT-TCSHHHHHHHCCEE
T ss_pred cCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCccchHHHHHHHHhCCceec-hH-HHHHHHHHhCCCCC
Confidence 4558 9999999999999999999988 998887776640 335677778875311 11 111222 3589
Q ss_pred EEEEccCCchHHHHH-HHHHhcCCCCcEEEEe
Q 014834 181 LVLLLISDAAQADNY-EKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 IViLavpd~~~~~Vl-~eI~~~lk~gaiLi~a 211 (417)
+||-++.... .+ +...+.|+++-.++..
T Consensus 249 ~vid~~g~~~---~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 249 VIIDATGADV---NILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEECCCCCT---HHHHHHGGGEEEEEEEEEC
T ss_pred EEEECCCChH---HHHHHHHHHHhcCCEEEEE
Confidence 9999988542 23 4555666666555433
No 366
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=94.20 E-value=0.068 Score=52.72 Aligned_cols=68 Identities=18% Similarity=0.206 Sum_probs=48.2
Q ss_pred hccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCCh---hhHHHHHHcC--ceecCCCcCCHHhhcCcCC
Q 014834 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS---RSFAEARAAG--FTEENGTLGDIYETISGSD 180 (417)
Q Consensus 107 ~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s---~s~~~A~~~G--~~~~~~~~~s~~Ea~~~AD 180 (417)
.|+| .||++||= +++..+++..+... |.+|.+.....- ... .+++.| +.. +.+++|+++++|
T Consensus 151 ~l~g-lkva~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~-~~~~~g~~v~~----~~d~~eav~~aD 218 (309)
T 4f2g_A 151 PIRG-KTVAWVGDANNMLYTWIQAARIL------DFKLQLSTPPGYALDAKL-VDAESAPFYQV----FDDPNEACKGAD 218 (309)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCGGGCCCGGG-SCGGGGGGEEE----CSSHHHHTTTCS
T ss_pred CCCC-CEEEEECCCcchHHHHHHHHHHc------CCEEEEECCcccCCCHHH-HHHHcCCeEEE----EcCHHHHhcCCC
Confidence 4788 89999995 58899999998888 998877644211 111 122333 333 578999999999
Q ss_pred EEEEcc
Q 014834 181 LVLLLI 186 (417)
Q Consensus 181 IViLav 186 (417)
+|+..+
T Consensus 219 vvyt~~ 224 (309)
T 4f2g_A 219 LVTTDV 224 (309)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 999864
No 367
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.18 E-value=0.066 Score=53.64 Aligned_cols=90 Identities=12% Similarity=0.095 Sum_probs=56.3
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecC--ChhhHHHHH---HcCceecCCCcCCHHhhcCcCCEEEE
Q 014834 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEAR---AAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 111 mkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~--~s~s~~~A~---~~G~~~~~~~~~s~~Ea~~~ADIViL 184 (417)
|.|||||| .|..|.-+.+-|.+. ...++...... ..+.....- ....... ..+.++...++|+||+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-----P~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~---~~~~~~~~~~~Dvvf~ 84 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-----PEAKITYLSSRTYAGKKLEEIFPSTLENSILS---EFDPEKVSKNCDVLFT 84 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-----TTEEEEEEECSTTTTSBHHHHCGGGCCCCBCB---CCCHHHHHHHCSEEEE
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-----CCcEEEEEeCcccccCChHHhChhhccCceEE---eCCHHHhhcCCCEEEE
Confidence 57999998 699999999988875 12354432221 122222110 0122210 1245555578999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
|+|.....++.+++ .|..|++.++
T Consensus 85 alp~~~s~~~~~~~-----~g~~VIDlSs 108 (351)
T 1vkn_A 85 ALPAGASYDLVREL-----KGVKIIDLGA 108 (351)
T ss_dssp CCSTTHHHHHHTTC-----CSCEEEESSS
T ss_pred CCCcHHHHHHHHHh-----CCCEEEECCh
Confidence 99988877666544 6888888877
No 368
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.14 E-value=0.16 Score=48.05 Aligned_cols=82 Identities=17% Similarity=0.144 Sum_probs=54.4
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC-h----hhHHH---HHHcCceecCCCcCC---HHhhcCc
Q 014834 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-S----RSFAE---ARAAGFTEENGTLGD---IYETISG 178 (417)
Q Consensus 111 mkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~-s----~s~~~---A~~~G~~~~~~~~~s---~~Ea~~~ 178 (417)
|++|.|+|. |.+|.++++.|.+. |++|++..|+. + ...+. ....|+....+.+.+ +.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~ 77 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF------SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQ 77 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC------CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcC
Confidence 478999995 99999999999998 99988877764 1 11111 123455332222333 5568889
Q ss_pred CCEEEEccCCc---hHHHHHHHH
Q 014834 179 SDLVLLLISDA---AQADNYEKI 198 (417)
Q Consensus 179 ADIViLavpd~---~~~~Vl~eI 198 (417)
+|+||.+.... ....+++..
T Consensus 78 ~d~vi~~a~~~~~~~~~~l~~aa 100 (321)
T 3c1o_A 78 VDIVISALPFPMISSQIHIINAI 100 (321)
T ss_dssp CSEEEECCCGGGSGGGHHHHHHH
T ss_pred CCEEEECCCccchhhHHHHHHHH
Confidence 99999988743 334555543
No 369
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=94.14 E-value=0.22 Score=49.64 Aligned_cols=80 Identities=13% Similarity=0.111 Sum_probs=43.3
Q ss_pred hhhccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCC--cEEEEEecCChhh--HHHHH---HcCceecC--CCcCCHHh
Q 014834 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRS--FAEAR---AAGFTEEN--GTLGDIYE 174 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G--~~ViVg~r~~s~s--~~~A~---~~G~~~~~--~~~~s~~E 174 (417)
+..... -||+|||. |.+|.+++..|... .=.+.+ .++.+.+...... .-.+. ...+.... ....+..+
T Consensus 19 ~~s~~~-vKVaViGAaG~IG~~la~~la~~-~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~ 96 (345)
T 4h7p_A 19 PGSMSA-VKVAVTGAAGQIGYALVPLIARG-ALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRV 96 (345)
T ss_dssp ---CCC-EEEEEESTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHH
T ss_pred CCCCCC-CEEEEECcCcHHHHHHHHHHHhc-cccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHH
Confidence 344555 69999996 99999999988875 000001 1455554432111 11111 11111000 01346788
Q ss_pred hcCcCCEEEEcc
Q 014834 175 TISGSDLVLLLI 186 (417)
Q Consensus 175 a~~~ADIViLav 186 (417)
++++||+||++-
T Consensus 97 a~~~advVvi~a 108 (345)
T 4h7p_A 97 AFDGVAIAIMCG 108 (345)
T ss_dssp HTTTCSEEEECC
T ss_pred HhCCCCEEEECC
Confidence 999999999974
No 370
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=94.10 E-value=0.084 Score=55.03 Aligned_cols=89 Identities=17% Similarity=0.161 Sum_probs=57.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC-H-HhhcCcCCEEEEccCCc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-I-YETISGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s-~-~Ea~~~ADIViLavpd~ 189 (417)
++|.|||+|..|..+|+.|.+. |++|++.+.+..+. +.+. -+...|.+-.+ + +.-+++||.++.++++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~d~~~~-~~~~--~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d 419 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK------PVPFILIDRQESPV-CNDH--VVVYGDATVGQTLRQAGIDRASGIIVTTNDD 419 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCSS-CCSS--CEEESCSSSSTHHHHHTTTSCSEEEECCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHC------CCCEEEEECChHHH-hhcC--CEEEeCCCCHHHHHhcCccccCEEEEECCCc
Confidence 6899999999999999999998 99988777654432 2111 22221222111 2 23478999999999987
Q ss_pred hHHHHHHHHHhcCCCC-cEEE
Q 014834 190 AQADNYEKIFSCMKPN-SILG 209 (417)
Q Consensus 190 ~~~~Vl~eI~~~lk~g-aiLi 209 (417)
...-+.-.+...+.+. .+|.
T Consensus 420 ~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 420 STNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp HHHHHHHHHHHHHCSSSEEEE
T ss_pred hHHHHHHHHHHHHCCCCEEEE
Confidence 5433333444455555 4554
No 371
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.94 E-value=0.37 Score=47.97 Aligned_cols=96 Identities=18% Similarity=0.182 Sum_probs=61.5
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhc------CcCC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~------~~AD 180 (417)
.| .+|.|+|.|.+|...++-++.. |. .|++..+. +...+.+++.|.... +..-.+..+.+ +..|
T Consensus 213 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 213 PG-DNVVILGGGPIGLAAVAILKHA------GASKVILSEPS-EVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSC-HHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCC-HHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCC
Confidence 46 8999999999999999999988 98 66654444 556788888886421 11112222222 2589
Q ss_pred EEEEccCCc--hHHHHHHHHHhcCCCCcEEEEec
Q 014834 181 LVLLLISDA--AQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 IViLavpd~--~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+||-++... .....++-+...++++-.++..+
T Consensus 285 ~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 285 LFLEATGVPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 999999876 22233333323347776665443
No 372
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.89 E-value=0.31 Score=47.79 Aligned_cols=92 Identities=18% Similarity=0.172 Sum_probs=60.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceec-CCCc--CCHHhhcC-----cC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~-~~~~--~s~~Ea~~-----~A 179 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..++ +...+.+++.|.... +... .+..+.+. ..
T Consensus 191 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 191 PG-STCAVFGLGGVGFSAIVGCKAA------GASRIIGVGTH-KDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECSC-GGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEECCC-HHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCC
Confidence 46 8999999999999999999888 88 67655544 455778888886420 1000 12333222 58
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCC-cEEEEe
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~g-aiLi~a 211 (417)
|+||-++... +.++.....++++ -.++..
T Consensus 263 Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 263 DYAVECAGRI---ETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCH---HHHHHHHHHHhcCCCEEEEE
Confidence 9999998752 3345555677776 555433
No 373
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.89 E-value=0.13 Score=49.48 Aligned_cols=82 Identities=16% Similarity=0.148 Sum_probs=55.0
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHH------HHHHcCceecCCCcCC---HHhhcC--cC
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFA------EARAAGFTEENGTLGD---IYETIS--GS 179 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~------~A~~~G~~~~~~~~~s---~~Ea~~--~A 179 (417)
++|.|+|. |.+|.++++.|.+. |++|++..|..+.... .....|+....+.+.+ +.++++ ++
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDA------HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHT------TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred CeEEEECCCcHHHHHHHHHHHHC------CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCC
Confidence 78999998 99999999999998 9999888886421111 1123455432233334 446777 99
Q ss_pred CEEEEccCCchH---HHHHHHHH
Q 014834 180 DLVLLLISDAAQ---ADNYEKIF 199 (417)
Q Consensus 180 DIViLavpd~~~---~~Vl~eI~ 199 (417)
|+||.+...... ..+++...
T Consensus 85 d~Vi~~a~~~n~~~~~~l~~aa~ 107 (346)
T 3i6i_A 85 DIVVSTVGGESILDQIALVKAMK 107 (346)
T ss_dssp CEEEECCCGGGGGGHHHHHHHHH
T ss_pred CEEEECCchhhHHHHHHHHHHHH
Confidence 999999876432 34554433
No 374
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.85 E-value=0.067 Score=47.93 Aligned_cols=71 Identities=18% Similarity=0.258 Sum_probs=48.8
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC---HHhhcCcCCEEEEcc
Q 014834 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLI 186 (417)
Q Consensus 111 mkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s---~~Ea~~~ADIViLav 186 (417)
||+|.|+| .|.+|.++++.|.+. |++|++..|..++.... ..++......+.+ ..++++++|+||.+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 75 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR------GFEVTAVVRHPEKIKIE--NEHLKVKKADVSSLDEVCEVCKGADAVISAF 75 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT------TCEEEEECSCGGGCCCC--CTTEEEECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC------CCEEEEEEcCcccchhc--cCceEEEEecCCCHHHHHHHhcCCCEEEEeC
Confidence 58999999 599999999999999 99998887764432111 1232221112233 456788999999997
Q ss_pred CCc
Q 014834 187 SDA 189 (417)
Q Consensus 187 pd~ 189 (417)
.+.
T Consensus 76 ~~~ 78 (227)
T 3dhn_A 76 NPG 78 (227)
T ss_dssp CC-
T ss_pred cCC
Confidence 654
No 375
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.84 E-value=0.17 Score=49.46 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=31.2
Q ss_pred ccccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEec
Q 014834 98 RDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (417)
Q Consensus 98 ~~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r 148 (417)
+|.+..+++.|+. .+|.|||+|-.|..++++|... |+ ++.+.++
T Consensus 24 ~~G~~~~q~kL~~-~~VlVvGaGGlGs~va~~La~a------GVG~i~lvD~ 68 (292)
T 3h8v_A 24 RMGIVSDYEKIRT-FAVAIVGVGGVGSVTAEMLTRC------GIGKLLLFDY 68 (292)
T ss_dssp --------CGGGG-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECC
T ss_pred ccChHHHHHHHhC-CeEEEECcCHHHHHHHHHHHHc------CCCEEEEECC
Confidence 4555334577888 9999999999999999999998 77 5665554
No 376
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.77 E-value=0.17 Score=47.44 Aligned_cols=73 Identities=14% Similarity=0.145 Sum_probs=49.9
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChh----hHHH---HHHcCceecCCCcCC---HHhhcCcC
Q 014834 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR----SFAE---ARAAGFTEENGTLGD---IYETISGS 179 (417)
Q Consensus 111 mkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~----s~~~---A~~~G~~~~~~~~~s---~~Ea~~~A 179 (417)
+++|.|+|. |.+|.++++.|.+. |++|++..|+.+. ..+. ....|+....+.+.+ +.++++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 77 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL------GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQV 77 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC------CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCC
Confidence 378999995 99999999999998 9998877776321 1111 123455432222333 45678899
Q ss_pred CEEEEccCCc
Q 014834 180 DLVLLLISDA 189 (417)
Q Consensus 180 DIViLavpd~ 189 (417)
|+||.+....
T Consensus 78 d~vi~~a~~~ 87 (313)
T 1qyd_A 78 DVVISALAGG 87 (313)
T ss_dssp SEEEECCCCS
T ss_pred CEEEECCccc
Confidence 9999987643
No 377
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.77 E-value=0.22 Score=51.15 Aligned_cols=94 Identities=12% Similarity=0.183 Sum_probs=65.2
Q ss_pred hccCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC--ceecCCCcCCHHh
Q 014834 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--FTEENGTLGDIYE 174 (417)
Q Consensus 107 ~l~gmkkIgIIG~G----------~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G--~~~~~~~~~s~~E 174 (417)
.++| +||+|+|+- +-...++..|.+. |.+|.+++..-.. +.....| +.. +.+.+|
T Consensus 315 ~~~~-~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~------g~~v~~~DP~~~~--~~~~~~~~~~~~----~~~~~~ 381 (450)
T 3gg2_A 315 NVQG-RCVAIWGLSFKPGTDDMREAPSLVLIEKLLEV------GCRVRVYDPVAMK--EAQKRLGDKVEY----TTDMYD 381 (450)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSCHH--HHHHHHGGGSEE----CSSHHH
T ss_pred cCCC-CEEEEEeeeeCCCCcccccChHHHHHHHHHHC------CCEEEEECCCCcH--HHHHhcCcccee----cCCHHH
Confidence 4688 999999984 3467888888888 9999877654322 1112233 443 467889
Q ss_pred hcCcCCEEEEccCCchHHH-HHHHHHhcCCCCcEEEEecCc
Q 014834 175 TISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 175 a~~~ADIViLavpd~~~~~-Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+++++|.|+++|.-....+ -++.+...|+ +.+|++.-++
T Consensus 382 ~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~-~~~i~D~r~~ 421 (450)
T 3gg2_A 382 AVRGAEALFHVTEWKEFRMPDWSALSQAMA-ASLVIDGRNV 421 (450)
T ss_dssp HTTTCSCEEECSCCGGGSSCCHHHHHHHSS-SCEEEESSCC
T ss_pred HhcCCCEEEEccCCHHHhhcCHHHHHHhcC-CCEEEECCCC
Confidence 9999999999999776643 2455666665 4577776554
No 378
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=93.75 E-value=0.15 Score=52.61 Aligned_cols=68 Identities=15% Similarity=0.127 Sum_probs=49.7
Q ss_pred cCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 109 NGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
..+|+|.|||+|-.|.+ +|+-|++. |++|.+.+...+...+..++.|+....+ .+. +.++.+|+||+.
T Consensus 17 ~~~~~v~viGiG~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~~g--~~~-~~~~~a~~vv~s 85 (491)
T 2f00_A 17 RRVRHIHFVGIGGAGMGGIAEVLANE------GYQISGSDLAPNPVTQQLMNLGATIYFN--HRP-ENVRDASVVVVS 85 (491)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHT------TCEEEEECSSCCHHHHHHHHTTCEEESS--CCG-GGGTTCSEEEEC
T ss_pred ccCCEEEEEEcCHHHHHHHHHHHHhC------CCeEEEECCCCCHHHHHHHHCCCEEECC--CCH-HHcCCCCEEEEC
Confidence 34589999999999997 99999998 9999877765544444555678775322 123 346789999885
No 379
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.74 E-value=0.1 Score=51.93 Aligned_cols=95 Identities=18% Similarity=0.229 Sum_probs=62.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceecCCCcCCH-Hhhc----C--cCC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDI-YETI----S--GSD 180 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~-~Ea~----~--~AD 180 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..++ ....+.+++.|....+-...+. .+.+ . ..|
T Consensus 185 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 185 PG-SHVYIAGAGPVGRCAAAGARLL------GAACVIVGDQN-PERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEEESC-HHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEcCC-HHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCC
Confidence 56 8999999999999999999888 88 77766554 4456788888874211111121 2222 1 589
Q ss_pred EEEEccCCch-----------HHHHHHHHHhcCCCCcEEEEe
Q 014834 181 LVLLLISDAA-----------QADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 IViLavpd~~-----------~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+||-++.... ....+++....++++-.++..
T Consensus 257 vvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 257 CGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred EEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 9999987542 123455555667776655533
No 380
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=93.73 E-value=0.11 Score=51.23 Aligned_cols=72 Identities=17% Similarity=0.148 Sum_probs=53.7
Q ss_pred hccCCCEEEEEccc---chHHHHHHHHHhhhhhhcCCcEEEEEecC----ChhhHHHHHHcCceecCCCcCCHHhhcCcC
Q 014834 107 AFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAAGFTEENGTLGDIYETISGS 179 (417)
Q Consensus 107 ~l~gmkkIgIIG~G---~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~----~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~A 179 (417)
.|+| .||++||=| ++..+++..+... |++|.+.... +....+.+++.|.... .+.+++|++++|
T Consensus 152 ~l~g-l~va~vGD~~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~a 222 (308)
T 1ml4_A 152 RIDG-LKIGLLGDLKYGRTVHSLAEALTFY------DVELYLISPELLRMPRHIVEELREKGMKVV--ETTTLEDVIGKL 222 (308)
T ss_dssp CSSS-EEEEEESCTTTCHHHHHHHHHGGGS------CEEEEEECCGGGCCCHHHHHHHHHTTCCEE--EESCTHHHHTTC
T ss_pred CCCC-eEEEEeCCCCcCchHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHcCCeEE--EEcCHHHHhcCC
Confidence 4678 899999985 8999999999888 9988776543 2223456666675320 146899999999
Q ss_pred CEEEEccC
Q 014834 180 DLVLLLIS 187 (417)
Q Consensus 180 DIViLavp 187 (417)
|+|....=
T Consensus 223 Dvvyt~~~ 230 (308)
T 1ml4_A 223 DVLYVTRI 230 (308)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99998753
No 381
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.69 E-value=0.37 Score=46.44 Aligned_cols=95 Identities=17% Similarity=0.115 Sum_probs=61.2
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhc------CcCC
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~------~~AD 180 (417)
..| ++|.|+|.|.+|...++-++.. |..+++..+..+...+.+++.|.... +..-.+..+.+ ...|
T Consensus 159 ~~g-~~VlV~GaG~vG~~aiq~ak~~------G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CEN-KNVIIIGAGTIGLLAIQCAVAL------GAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTT-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSE
T ss_pred CCC-CEEEEECCCCcchHHHHHHHHc------CCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcc
Confidence 457 8999999999999999999988 88665555544566788999996421 11112222222 3468
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+|+-++... +.++.....++++-.+++.+
T Consensus 232 ~v~d~~G~~---~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 232 LILETAGVP---QTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEECSCSH---HHHHHHHHHCCTTCEEEECC
T ss_pred ccccccccc---chhhhhhheecCCeEEEEEe
Confidence 888887643 23444445667776665443
No 382
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=93.68 E-value=0.26 Score=46.09 Aligned_cols=70 Identities=23% Similarity=0.321 Sum_probs=49.3
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCC-cEEEEEecCChhhH-HHHHHcCceecCCCcCC---HHhhcCcCCEEEEc
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSF-AEARAAGFTEENGTLGD---IYETISGSDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G-~~ViVg~r~~s~s~-~~A~~~G~~~~~~~~~s---~~Ea~~~ADIViLa 185 (417)
|+|.|+|. |.+|.++++.|.+. | ++|++..|+.++.. +.....|+....+.+.+ +.++++++|+||.+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~------g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLED------GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhc------CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 78999997 99999999999998 8 89888777644321 22223455432222333 45678899999998
Q ss_pred cC
Q 014834 186 IS 187 (417)
Q Consensus 186 vp 187 (417)
..
T Consensus 80 a~ 81 (299)
T 2wm3_A 80 TN 81 (299)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 383
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.61 E-value=0.2 Score=49.44 Aligned_cols=93 Identities=22% Similarity=0.260 Sum_probs=61.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhcC--------c
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS--------G 178 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~~--------~ 178 (417)
.| .+|.|+|.|.+|...++-++.. |. .|++..+ .+...+.+++.|.... +....+..+.+. .
T Consensus 182 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~-~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 182 AG-STVAILGGGVIGLLTVQLARLA------GATTVILSTR-QATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECS-CHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECC-CHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCC
Confidence 56 8999999999999999999988 98 6655444 4556778888887421 111123334333 4
Q ss_pred CCEEEEccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 179 ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
.|+||-++... +.++.....++++-.++..+
T Consensus 254 ~Dvvid~~G~~---~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 254 VDVVIECAGVA---ETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEEEEECSCCH---HHHHHHHHHEEEEEEEEECS
T ss_pred CCEEEECCCCH---HHHHHHHHHhccCCEEEEEe
Confidence 79999998743 23444445566666655443
No 384
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.53 E-value=0.4 Score=47.07 Aligned_cols=91 Identities=19% Similarity=0.212 Sum_probs=60.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceec-CCCc--CCHHhhcC-----cC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~-~~~~--~s~~Ea~~-----~A 179 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..++ +...+.+++.|.... +... .+..+.+. ..
T Consensus 195 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 195 PG-STCAVFGLGCVGLSAIIGCKIA------GASRIIAIDIN-GEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSC-GGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcCC-HHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCc
Confidence 46 8999999999999999999888 88 67655544 455678888886420 1000 12333222 58
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCC-cEEEE
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGL 210 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~g-aiLi~ 210 (417)
|+||-++... +.++.....++++ -.++.
T Consensus 267 Dvvid~~G~~---~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 267 DYSLDCAGTA---QTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp SEEEESSCCH---HHHHHHHHTBCTTTCEEEE
T ss_pred cEEEECCCCH---HHHHHHHHHhhcCCCEEEE
Confidence 9999998752 3345555677776 55543
No 385
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.50 E-value=0.22 Score=48.10 Aligned_cols=92 Identities=17% Similarity=0.192 Sum_probs=61.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhcC----cCCEEE
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS----GSDLVL 183 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~~----~ADIVi 183 (417)
.| ++|.|+|.|.+|...++-++.. |.+|++..++ +...+.+++.|.... +....+..+.+. ..|+||
T Consensus 166 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vi 237 (340)
T 3s2e_A 166 PG-QWVVISGIGGLGHVAVQYARAM------GLRVAAVDID-DAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVL 237 (340)
T ss_dssp TT-SEEEEECCSTTHHHHHHHHHHT------TCEEEEEESC-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCeEEEEeCC-HHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEE
Confidence 56 8999999999999999999988 9988766555 455678888886420 111123333332 579999
Q ss_pred EccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 184 LLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 184 Lavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
.++... +.++.....++++-.++..
T Consensus 238 d~~g~~---~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 238 VTAVSP---KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp ESSCCH---HHHHHHHHHEEEEEEEEEC
T ss_pred EeCCCH---HHHHHHHHHhccCCEEEEe
Confidence 987643 3444555566666665543
No 386
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.39 E-value=0.21 Score=44.22 Aligned_cols=93 Identities=12% Similarity=0.064 Sum_probs=59.6
Q ss_pred cCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHhh----c--CcCC
Q 014834 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYET----I--SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea----~--~~AD 180 (417)
+| ++|.|+| .|.+|.++++.++.. |.+|++..++. ...+.+++.|.... |-...+..+. . ...|
T Consensus 38 ~g-~~vlV~Ga~ggiG~~~~~~~~~~------G~~V~~~~~~~-~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 38 PG-ERVLIHSATGGVGMAAVSIAKMI------GARIYTTAGSD-AKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TT-CEEEETTTTSHHHHHHHHHHHHH------TCEEEEEESSH-HHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEeeCCChHHHHHHHHHHHc------CCEEEEEeCCH-HHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCe
Confidence 46 8999999 699999999999988 98887766653 33455666664210 1111122221 2 2479
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
+||.++.. +.++...+.|+++-.++..+.
T Consensus 110 ~vi~~~g~----~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 110 VVLNSLAG----EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEEECCCT----HHHHHHHHTEEEEEEEEECSC
T ss_pred EEEECCch----HHHHHHHHHhccCCEEEEEcC
Confidence 99988864 345555667777766665443
No 387
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.38 E-value=0.41 Score=46.97 Aligned_cols=92 Identities=22% Similarity=0.280 Sum_probs=59.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceec-CCCc--CCHHhhcC-----cC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~-~~~~--~s~~Ea~~-----~A 179 (417)
.| ++|.|+|.|.+|...++-++.. |. +|++..++ +...+.+++.|.... +... .+..+.+. ..
T Consensus 191 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 191 QG-STCAVFGLGGVGLSVIMGCKAA------GAARIIGVDIN-KDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSC-GGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcCC-HHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCC
Confidence 46 8999999999999999999988 88 67655554 445678888886420 1000 12333222 48
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCC-cEEEEe
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~g-aiLi~a 211 (417)
|+||-++... +.++.....++++ -.++..
T Consensus 263 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 263 DFSFEVIGRL---DTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SEEEECSCCH---HHHHHHHHHBCTTTCEEEEC
T ss_pred cEEEECCCCH---HHHHHHHHHhhcCCcEEEEe
Confidence 9999998753 2344445567776 555433
No 388
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=93.36 E-value=0.37 Score=47.19 Aligned_cols=91 Identities=12% Similarity=0.039 Sum_probs=57.1
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc----Cc---eecCCCcCCHHhh-cCcC
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GF---TEENGTLGDIYET-ISGS 179 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~----G~---~~~~~~~~s~~Ea-~~~A 179 (417)
-.| ++|..||||..|.+...--+.. |.+|+ +.+.++...+.|++. |. ... ..+..+. -...
T Consensus 121 ~~g-~rVLDIGcG~G~~ta~~lA~~~------ga~V~-gIDis~~~l~~Ar~~~~~~gl~~v~~v---~gDa~~l~d~~F 189 (298)
T 3fpf_A 121 RRG-ERAVFIGGGPLPLTGILLSHVY------GMRVN-VVEIEPDIAELSRKVIEGLGVDGVNVI---TGDETVIDGLEF 189 (298)
T ss_dssp CTT-CEEEEECCCSSCHHHHHHHHTT------CCEEE-EEESSHHHHHHHHHHHHHHTCCSEEEE---ESCGGGGGGCCC
T ss_pred CCc-CEEEEECCCccHHHHHHHHHcc------CCEEE-EEECCHHHHHHHHHHHHhcCCCCeEEE---ECchhhCCCCCc
Confidence 356 8999999998765433222223 66765 555555555665543 43 111 1233332 2467
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCCcEEE
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~gaiLi 209 (417)
|+|++..-.....++++++...||||-.|+
T Consensus 190 DvV~~~a~~~d~~~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 190 DVLMVAALAEPKRRVFRNIHRYVDTETRII 219 (298)
T ss_dssp SEEEECTTCSCHHHHHHHHHHHCCTTCEEE
T ss_pred CEEEECCCccCHHHHHHHHHHHcCCCcEEE
Confidence 999987654455689999999999998765
No 389
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=93.35 E-value=0.13 Score=50.57 Aligned_cols=65 Identities=20% Similarity=0.189 Sum_probs=47.7
Q ss_pred hccCCCEEEEEccc---chHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEE
Q 014834 107 AFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 107 ~l~gmkkIgIIG~G---~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIVi 183 (417)
.|+| .||++||=| ++..+++..+... |++|.+.....-.. + ..+.|. ..+++|++++||+|+
T Consensus 144 ~l~g-lkva~vGD~~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~-~-~~~~g~------~~d~~eav~~aDvvy 208 (304)
T 3r7f_A 144 TFKG-LTVSIHGDIKHSRVARSNAEVLTRL------GARVLFSGPSEWQD-E-ENTFGT------YVSMDEAVESSDVVM 208 (304)
T ss_dssp CCTT-CEEEEESCCTTCHHHHHHHHHHHHT------TCEEEEESCGGGSC-T-TCSSCE------ECCHHHHHHHCSEEE
T ss_pred CCCC-CEEEEEcCCCCcchHHHHHHHHHHc------CCEEEEECCCccCc-c-hhhcCc------cCCHHHHhCCCCEEE
Confidence 4788 999999975 6999999999988 99887765432111 1 012332 468999999999999
Q ss_pred Ecc
Q 014834 184 LLI 186 (417)
Q Consensus 184 Lav 186 (417)
...
T Consensus 209 t~~ 211 (304)
T 3r7f_A 209 LLR 211 (304)
T ss_dssp ECC
T ss_pred ecc
Confidence 864
No 390
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=93.35 E-value=0.1 Score=54.43 Aligned_cols=48 Identities=27% Similarity=0.344 Sum_probs=35.2
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG 161 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G 161 (417)
.++| +++.|+|.|-+|.+++..|.+. |.+|++.+|+.++..+.+.+.+
T Consensus 361 ~l~~-k~vlV~GaGGig~aia~~L~~~------G~~V~i~~R~~~~a~~la~~~~ 408 (523)
T 2o7s_A 361 PLAS-KTVVVIGAGGAGKALAYGAKEK------GAKVVIANRTYERALELAEAIG 408 (523)
T ss_dssp ------CEEEECCSHHHHHHHHHHHHH------CC-CEEEESSHHHHHHHHHHTT
T ss_pred ccCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHcC
Confidence 3567 8999999999999999999999 9888888887665555665554
No 391
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.33 E-value=0.46 Score=46.61 Aligned_cols=91 Identities=19% Similarity=0.214 Sum_probs=60.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceec-CCCc--CCHHhhcC-----cC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~-~~~~--~s~~Ea~~-----~A 179 (417)
.| ++|.|+|.|.+|...++-++.. |. +|++..++ +...+.+++.|.... +..- .+..+.+. ..
T Consensus 192 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 192 PG-STCAVFGLGAVGLAAVMGCHSA------GAKRIIAVDLN-PDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSC-GGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEcCC-HHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCC
Confidence 46 8999999999999999999988 88 67655544 455778888886420 1000 12333332 47
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCC-cEEEE
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGL 210 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~g-aiLi~ 210 (417)
|+||-++... +.++.....++++ -.++.
T Consensus 264 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 264 DFSLECVGNV---GVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEE
T ss_pred CEEEECCCCH---HHHHHHHHHhhcCCcEEEE
Confidence 9999998752 2345556677776 55443
No 392
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=93.32 E-value=0.24 Score=49.54 Aligned_cols=89 Identities=12% Similarity=0.067 Sum_probs=55.2
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEE-ecC-ChhhHHHH-------------HHcCceecCCCcCCHHhh
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVG-LRK-GSRSFAEA-------------RAAGFTEENGTLGDIYET 175 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg-~r~-~s~s~~~A-------------~~~G~~~~~~~~~s~~Ea 175 (417)
.|||||| .|..|.-+.+-|.+. ..+++... .++ ..+..... .+.-+. ..+. +.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-----P~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~-----~~~~-~~ 76 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNH-----PYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK-----PTDP-KL 76 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-----SSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE-----ECCG-GG
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-----CCceEEEEECchhcCCChhHhcccccccccccccccceEE-----eCCH-HH
Confidence 5899999 699999999977654 12344322 222 11222221 111111 1133 34
Q ss_pred cCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 176 ~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+.++|+||+|+|.....++.+.+. +.|..+++.++-
T Consensus 77 ~~~vDvvf~a~p~~~s~~~a~~~~---~~G~~vIDlSa~ 112 (359)
T 4dpk_A 77 MDDVDIIFSPLPQGAAGPVEEQFA---KEGFPVISNSPD 112 (359)
T ss_dssp CTTCCEEEECCCTTTHHHHHHHHH---HTTCEEEECSST
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HCCCEEEEcCCC
Confidence 579999999999988888777654 458888877663
No 393
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=93.32 E-value=0.24 Score=49.54 Aligned_cols=89 Identities=12% Similarity=0.067 Sum_probs=55.2
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEE-ecC-ChhhHHHH-------------HHcCceecCCCcCCHHhh
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVG-LRK-GSRSFAEA-------------RAAGFTEENGTLGDIYET 175 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg-~r~-~s~s~~~A-------------~~~G~~~~~~~~~s~~Ea 175 (417)
.|||||| .|..|.-+.+-|.+. ..+++... .++ ..+..... .+.-+. ..+. +.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-----P~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~-----~~~~-~~ 76 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNH-----PYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK-----PTDP-KL 76 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-----SSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE-----ECCG-GG
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-----CCceEEEEECchhcCCChhHhcccccccccccccccceEE-----eCCH-HH
Confidence 5899999 699999999977654 12344322 222 11222221 111111 1133 34
Q ss_pred cCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 176 ~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+.++|+||+|+|.....++.+.+. +.|..+++.++-
T Consensus 77 ~~~vDvvf~a~p~~~s~~~a~~~~---~~G~~vIDlSa~ 112 (359)
T 4dpl_A 77 MDDVDIIFSPLPQGAAGPVEEQFA---KEGFPVISNSPD 112 (359)
T ss_dssp CTTCCEEEECCCTTTHHHHHHHHH---HTTCEEEECSST
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HCCCEEEEcCCC
Confidence 579999999999988888777654 458888877663
No 394
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.31 E-value=0.27 Score=46.98 Aligned_cols=76 Identities=18% Similarity=0.101 Sum_probs=51.2
Q ss_pred hhccCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHH---HH-------cCceecCCCcCC---
Q 014834 106 DAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA---RA-------AGFTEENGTLGD--- 171 (417)
Q Consensus 106 ~~l~gmkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A---~~-------~G~~~~~~~~~s--- 171 (417)
..+++ |+|.|.| .|-+|..+++.|.+. |++|++..|......... .. .++....+.+.+
T Consensus 21 ~~~~~-~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 93 (351)
T 3ruf_A 21 LIFSP-KTWLITGVAGFIGSNLLEKLLKL------NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTT 93 (351)
T ss_dssp HHHSC-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHH
T ss_pred CCCCC-CeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHH
Confidence 34566 9999999 599999999999999 999988777543222221 11 233321122333
Q ss_pred HHhhcCcCCEEEEccCC
Q 014834 172 IYETISGSDLVLLLISD 188 (417)
Q Consensus 172 ~~Ea~~~ADIViLavpd 188 (417)
..++++++|+||.+...
T Consensus 94 ~~~~~~~~d~Vih~A~~ 110 (351)
T 3ruf_A 94 CEQVMKGVDHVLHQAAL 110 (351)
T ss_dssp HHHHTTTCSEEEECCCC
T ss_pred HHHHhcCCCEEEECCcc
Confidence 45678899999988753
No 395
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=93.29 E-value=0.24 Score=48.22 Aligned_cols=91 Identities=19% Similarity=0.160 Sum_probs=61.9
Q ss_pred cCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhc------CcCCE
Q 014834 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI------SGSDL 181 (417)
Q Consensus 109 ~gmkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~------~~ADI 181 (417)
.| ++|.|+| .|.+|.+.++.++.. |.+|++. ++ ....+.+++.|....+ ...+..+.+ ...|+
T Consensus 150 ~g-~~VlV~Ga~g~iG~~~~q~a~~~------Ga~Vi~~-~~-~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 150 DG-QTVLIQGGGGGVGHVAIQIALAR------GARVFAT-AR-GSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEE-EC-HHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CC-CEEEEecCCCHHHHHHHHHHHHC------CCEEEEE-eC-HHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceE
Confidence 56 8999999 799999999999988 9988766 44 3446778888875322 122333322 35899
Q ss_pred EEEccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 182 ViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
||-++... .++.....++++-.++..++
T Consensus 220 vid~~g~~----~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 220 VYDTLGGP----VLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp EEESSCTH----HHHHHHHHEEEEEEEEESCC
T ss_pred EEECCCcH----HHHHHHHHHhcCCeEEEEcc
Confidence 99998853 34444456666666555444
No 396
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.28 E-value=0.51 Score=48.52 Aligned_cols=95 Identities=19% Similarity=0.171 Sum_probs=65.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC-ceecCCCcCC----HHhhcCcCCEEEEcc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLGD----IYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G-~~~~~~~~~s----~~Ea~~~ADIViLav 186 (417)
++|-|+|.|++|..+|+.|.+ +++|.+-.+...+....+.+.. ..+.+|...+ .++-+.++|+++-+|
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~-------~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T 308 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQ-------TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALT 308 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECC
T ss_pred cEEEEEcchHHHHHHHHHhhh-------cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcc
Confidence 899999999999999999854 5788877776666666776642 2222233333 235689999999999
Q ss_pred CCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 187 SDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
.+...-=+..-++..+...+++....-
T Consensus 309 ~~De~Ni~~~llAk~~gv~kvIa~vn~ 335 (461)
T 4g65_A 309 NEDETNIMSAMLAKRMGAKKVMVLIQR 335 (461)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred cCcHHHHHHHHHHHHcCCccccccccc
Confidence 987654344445666766667775553
No 397
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=93.22 E-value=0.22 Score=49.53 Aligned_cols=68 Identities=15% Similarity=0.075 Sum_probs=49.8
Q ss_pred hccCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCcEEEEEecCChh------hHHHHH----H--cCc--eecCCCcC
Q 014834 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR------SFAEAR----A--AGF--TEENGTLG 170 (417)
Q Consensus 107 ~l~gmkkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~------s~~~A~----~--~G~--~~~~~~~~ 170 (417)
.++| .||++||=+ ++..+++..+..- |.+|.+.....-. ..+.++ + .|. .. +.
T Consensus 158 ~l~g-l~va~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~----~~ 226 (328)
T 3grf_A 158 GFKG-IKFAYCGDSMNNVTYDLMRGCALL------GMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKI----FH 226 (328)
T ss_dssp TGGG-CCEEEESCCSSHHHHHHHHHHHHH------TCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEE----ES
T ss_pred ccCC-cEEEEeCCCCcchHHHHHHHHHHc------CCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEE----Ec
Confidence 5889 999999976 8899999998888 9988776543211 222333 3 463 33 57
Q ss_pred CHHhhcCcCCEEEEc
Q 014834 171 DIYETISGSDLVLLL 185 (417)
Q Consensus 171 s~~Ea~~~ADIViLa 185 (417)
+++|+++++|+|..-
T Consensus 227 d~~eav~~aDvvytd 241 (328)
T 3grf_A 227 DCKKGCEGVDVVYTD 241 (328)
T ss_dssp SHHHHHTTCSEEEEC
T ss_pred CHHHHhcCCCEEEec
Confidence 899999999999863
No 398
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=93.17 E-value=0.25 Score=51.50 Aligned_cols=76 Identities=21% Similarity=0.086 Sum_probs=51.1
Q ss_pred hhhccCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCcEEEEEecCCh-hhHHHHHHcCceecCCCcCCHHhhcCcCCEE
Q 014834 105 PDAFNGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~ViVg~r~~s-~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIV 182 (417)
.-+|++ ++|-|||.|-.|.+ +|+-|++. |++|.+.+.... ...+..++.|+....| .+.++...++|+|
T Consensus 14 ~~~~~~-~~i~~iGiGg~Gms~lA~~l~~~------G~~V~~sD~~~~~~~~~~L~~~gi~~~~G--~~~~~~~~~~d~v 84 (524)
T 3hn7_A 14 NLYFQG-MHIHILGICGTFMGSLALLARAL------GHTVTGSDANIYPPMSTQLEQAGVTIEEG--YLIAHLQPAPDLV 84 (524)
T ss_dssp -----C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCCCTTHHHHHHHTTCEEEES--CCGGGGCSCCSEE
T ss_pred ceeecC-CEEEEEEecHhhHHHHHHHHHhC------CCEEEEECCCCCcHHHHHHHHCCCEEECC--CCHHHcCCCCCEE
Confidence 356777 99999999999996 78888988 999988876532 3344556678875211 2344555679999
Q ss_pred EEc--cCCc
Q 014834 183 LLL--ISDA 189 (417)
Q Consensus 183 iLa--vpd~ 189 (417)
|+. +|+.
T Consensus 85 V~Spgi~~~ 93 (524)
T 3hn7_A 85 VVGNAMKRG 93 (524)
T ss_dssp EECTTCCTT
T ss_pred EECCCcCCC
Confidence 984 5543
No 399
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.13 E-value=0.36 Score=49.57 Aligned_cols=87 Identities=14% Similarity=0.106 Sum_probs=57.6
Q ss_pred cccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHH-HHHcCceecCCCcCCHHhhcCcC
Q 014834 101 FKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-ARAAGFTEENGTLGDIYETISGS 179 (417)
Q Consensus 101 f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~-A~~~G~~~~~~~~~s~~Ea~~~A 179 (417)
||.. -.++| ++|.|||.|..|.+-++.|.+. |.+|+|.........+. +.+.++....+. .+ .+-+.++
T Consensus 4 ~P~~-~~l~~-~~vlVvGgG~va~~k~~~L~~~------ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~-~~-~~~l~~~ 73 (457)
T 1pjq_A 4 LPIF-CQLRD-RDCLIVGGGDVAERKARLLLEA------GARLTVNALTFIPQFTVWANEGMLTLVEGP-FD-ETLLDSC 73 (457)
T ss_dssp EEEE-ECCBT-CEEEEECCSHHHHHHHHHHHHT------TBEEEEEESSCCHHHHHHHTTTSCEEEESS-CC-GGGGTTC
T ss_pred eeeE-EECCC-CEEEEECCCHHHHHHHHHHHhC------cCEEEEEcCCCCHHHHHHHhcCCEEEEECC-CC-ccccCCc
Confidence 4443 45789 9999999999999999999999 99988877643333222 222344331111 12 2346789
Q ss_pred CEEEEccCCchH-HHHHHH
Q 014834 180 DLVLLLISDAAQ-ADNYEK 197 (417)
Q Consensus 180 DIViLavpd~~~-~~Vl~e 197 (417)
|+||.++.+... ..++..
T Consensus 74 ~lVi~at~~~~~n~~i~~~ 92 (457)
T 1pjq_A 74 WLAIAATDDDTVNQRVSDA 92 (457)
T ss_dssp SEEEECCSCHHHHHHHHHH
T ss_pred cEEEEcCCCHHHHHHHHHH
Confidence 999998887754 345543
No 400
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.13 E-value=0.24 Score=48.05 Aligned_cols=92 Identities=13% Similarity=0.158 Sum_probs=60.0
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhc----CcCCEEE
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI----SGSDLVL 183 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~----~~ADIVi 183 (417)
.| ++|.|+|.|.+|...++-++.. |.+|++..++ +...+.+++.|.... |-...+..+.+ ...|+||
T Consensus 164 ~g-~~VlV~GaG~vG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vi 235 (339)
T 1rjw_A 164 PG-EWVAIYGIGGLGHVAVQYAKAM------GLNVVAVDIG-DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAV 235 (339)
T ss_dssp TT-CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEE
Confidence 46 8999999999999999999988 9988766554 445677778886320 11111222222 4689999
Q ss_pred EccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 184 LLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 184 Lavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
-++... ..++...+.++++-.++..
T Consensus 236 d~~g~~---~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 236 VTAVSK---PAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp ESSCCH---HHHHHHHHHEEEEEEEEEC
T ss_pred ECCCCH---HHHHHHHHHhhcCCEEEEe
Confidence 998752 2344444556666555433
No 401
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.13 E-value=0.44 Score=46.60 Aligned_cols=92 Identities=20% Similarity=0.165 Sum_probs=60.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceec-CCCc--CCHHhhcC-----cC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~-~~~~--~s~~Ea~~-----~A 179 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..++ +...+.+++.|.... +..- .+..+.++ ..
T Consensus 190 ~g-~~VlV~GaG~vG~~avqla~~~------Ga~~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 190 PG-SVCAVFGLGGVGLAVIMGCKVA------GASRIIGVDIN-KDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECSC-GGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcCC-HHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCC
Confidence 46 8999999999999999999988 88 67655544 445677888886420 1000 12333222 58
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCC-cEEEEe
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~g-aiLi~a 211 (417)
|+||-++... +.++.....++++ -.++..
T Consensus 262 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 262 DYSFECIGNV---KVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCcH---HHHHHHHHhhccCCcEEEEE
Confidence 9999998752 2345555677776 555433
No 402
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=93.12 E-value=0.1 Score=50.44 Aligned_cols=81 Identities=14% Similarity=0.151 Sum_probs=48.0
Q ss_pred cccchhhccCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcC-C---HHhh
Q 014834 101 FKLLPDAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG-D---IYET 175 (417)
Q Consensus 101 f~~~~~~l~gmkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~-s---~~Ea 175 (417)
++.++..+++ |+|.|+| .|.+|..+++.|.+. .|++|++..|..++........++....+.+. + +.++
T Consensus 15 ~~~~~~~m~~-~~vlVtGatG~iG~~l~~~L~~~-----~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~ 88 (372)
T 3slg_A 15 QTQGPGSMKA-KKVLILGVNGFIGHHLSKRILET-----TDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYH 88 (372)
T ss_dssp --------CC-CEEEEESCSSHHHHHHHHHHHHH-----SSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHH
T ss_pred hhcCCcccCC-CEEEEECCCChHHHHHHHHHHhC-----CCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHH
Confidence 5566677777 9999999 699999999999875 16888887776543222222234332112223 3 4457
Q ss_pred cCcCCEEEEccC
Q 014834 176 ISGSDLVLLLIS 187 (417)
Q Consensus 176 ~~~ADIViLavp 187 (417)
++++|+||-+.-
T Consensus 89 ~~~~d~Vih~A~ 100 (372)
T 3slg_A 89 VKKCDVILPLVA 100 (372)
T ss_dssp HHHCSEEEECBC
T ss_pred hccCCEEEEcCc
Confidence 789999997543
No 403
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.11 E-value=0.34 Score=47.70 Aligned_cols=92 Identities=20% Similarity=0.254 Sum_probs=60.9
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceec-CCC--cCCHHhhcC-----cC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGT--LGDIYETIS-----GS 179 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~-~~~--~~s~~Ea~~-----~A 179 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..++ +...+.+++.|.... +.. ..+..+.++ ..
T Consensus 193 ~g-~~VlV~GaG~vG~~a~q~a~~~------Ga~~Vi~~~~~-~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 193 PG-SNVAIFGLGTVGLAVAEGAKTA------GASRIIGIDID-SKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHH------TCSCEEEECSC-TTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcCC-HHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCC
Confidence 46 8999999999999999999988 98 67655544 445778888887420 100 112233222 48
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCC-cEEEEe
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~g-aiLi~a 211 (417)
|+||-++... +.++.....++++ -.++..
T Consensus 265 D~vid~~g~~---~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 265 DYSFECIGNV---SVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCH---HHHHHHHHHhhccCCEEEEE
Confidence 9999998863 3345555677774 554433
No 404
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.10 E-value=0.44 Score=46.45 Aligned_cols=92 Identities=14% Similarity=0.107 Sum_probs=59.8
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceec-CCC---cCCHHhhc-----Cc
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGT---LGDIYETI-----SG 178 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~-~~~---~~s~~Ea~-----~~ 178 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..++ +...+.+++.|.... +.. ..+..+.+ ..
T Consensus 171 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g 242 (356)
T 1pl8_A 171 LG-HKVLVCGAGPIGMVTLLVAKAM------GAAQVVVTDLS-ATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCK 242 (356)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESC-HHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCC-HHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCC
Confidence 56 8999999999999999998888 88 77665554 445678888886320 100 00111111 35
Q ss_pred CCEEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 179 ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
.|+||-++.... .++.....++++-.++..
T Consensus 243 ~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 243 PEVTIECTGAEA---SIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp CSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCCChH---HHHHHHHHhcCCCEEEEE
Confidence 899999987532 344445567776665543
No 405
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=93.08 E-value=0.086 Score=51.60 Aligned_cols=70 Identities=13% Similarity=-0.013 Sum_probs=52.3
Q ss_pred hccCCCEEEEEcc---cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEE
Q 014834 107 AFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 107 ~l~gmkkIgIIG~---G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIVi 183 (417)
.|+| .||++||= +++..+++..+... |.+|.+.....-.... ..+.|+.. +.+++|+++++|+|.
T Consensus 143 ~l~g-l~va~vGDl~~~rva~Sl~~~~~~~------g~~v~~~~P~~~~p~~-~~~~g~~~----~~d~~eav~~aDvvy 210 (291)
T 3d6n_B 143 EVKD-LRVLYVGDIKHSRVFRSGAPLLNMF------GAKIGVCGPKTLIPRD-VEVFKVDV----FDDVDKGIDWADVVI 210 (291)
T ss_dssp CCTT-CEEEEESCCTTCHHHHHHHHHHHHT------TCEEEEESCGGGSCTT-GGGGCEEE----ESSHHHHHHHCSEEE
T ss_pred CcCC-cEEEEECCCCCCchHHHHHHHHHHC------CCEEEEECCchhCCch-HHHCCCEE----EcCHHHHhCCCCEEE
Confidence 4788 99999997 89999999999988 9998776543211001 12457654 678999999999999
Q ss_pred EccCCc
Q 014834 184 LLISDA 189 (417)
Q Consensus 184 Lavpd~ 189 (417)
. +-.+
T Consensus 211 ~-~~~q 215 (291)
T 3d6n_B 211 W-LRLQ 215 (291)
T ss_dssp E-CCCC
T ss_pred E-eCcc
Confidence 9 5543
No 406
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.01 E-value=0.13 Score=50.53 Aligned_cols=91 Identities=20% Similarity=0.234 Sum_probs=59.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhc------CcCCE
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSDL 181 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~------~~ADI 181 (417)
.| ++|.|+|.|.+|...++-++.. |.+|++..+. ....+.+++.|.... +....+..+.+ ...|+
T Consensus 189 ~g-~~VlV~G~G~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~ 260 (363)
T 3uog_A 189 AG-DRVVVQGTGGVALFGLQIAKAT------GAEVIVTSSS-REKLDRAFALGADHGINRLEEDWVERVYALTGDRGADH 260 (363)
T ss_dssp TT-CEEEEESSBHHHHHHHHHHHHT------TCEEEEEESC-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEecC-chhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceE
Confidence 46 8999999999999999999988 9988776655 345677888886421 11112322222 16899
Q ss_pred EEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 182 VLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 182 ViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
||-++........ ...++++-.++..
T Consensus 261 vid~~g~~~~~~~----~~~l~~~G~iv~~ 286 (363)
T 3uog_A 261 ILEIAGGAGLGQS----LKAVAPDGRISVI 286 (363)
T ss_dssp EEEETTSSCHHHH----HHHEEEEEEEEEE
T ss_pred EEECCChHHHHHH----HHHhhcCCEEEEE
Confidence 9999886544333 3445565555544
No 407
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=92.97 E-value=0.16 Score=49.06 Aligned_cols=83 Identities=14% Similarity=0.190 Sum_probs=52.1
Q ss_pred cccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCc
Q 014834 99 DLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG 178 (417)
Q Consensus 99 ~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ 178 (417)
+.|....+..+| +||++||+ | +.+.+.+ .. +.++.|.+++.. .|..+ ....++++++
T Consensus 130 d~~~~~~~~~~g-~kV~vIG~--~-P~i~~~l-~~------~~~v~V~d~~p~--------~g~~p----~~~~e~ll~~ 186 (270)
T 2h1q_A 130 DPFIMSQNEVKG-KKVGVVGH--F-PHLESLL-EP------ICDLSILEWSPE--------EGDYP----LPASEFILPE 186 (270)
T ss_dssp CHHHHTTTTTTT-SEEEEESC--C-TTHHHHH-TT------TSEEEEEESSCC--------TTCEE----GGGHHHHGGG
T ss_pred cHHHHHHhhcCC-CEEEEECC--C-HHHHHHH-hC------CCCEEEEECCCC--------CCCCC----hHHHHHHhhc
Confidence 456554466788 99999999 4 6666654 45 778988887643 24433 2346678999
Q ss_pred CCEEEEccCCchHHHHHHHHHhcCCCC
Q 014834 179 SDLVLLLISDAAQADNYEKIFSCMKPN 205 (417)
Q Consensus 179 ADIViLavpd~~~~~Vl~eI~~~lk~g 205 (417)
||+|++.-. ......++.|..+.++.
T Consensus 187 aD~viiTGs-TlvN~Ti~~lL~~~~~a 212 (270)
T 2h1q_A 187 CDYVYITCA-SVVDKTLPRLLELSRNA 212 (270)
T ss_dssp CSEEEEETH-HHHHTCHHHHHHHTTTS
T ss_pred CCEEEEEee-eeecCCHHHHHHhCccC
Confidence 999887532 22233444455444443
No 408
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=92.94 E-value=0.13 Score=51.68 Aligned_cols=91 Identities=13% Similarity=0.102 Sum_probs=52.4
Q ss_pred CCEEEEEc-ccchHHHHHHH-HHhhhhhhcCCc---EEEEE-ecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEE
Q 014834 111 INQIGVIG-WGSQGPAQAQN-LRDSLAEAKSDI---VVKVG-LRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 111 mkkIgIIG-~G~mG~AiA~~-Lr~s~~~~~~G~---~ViVg-~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViL 184 (417)
|+||||+| .|.+|.-+.+. |.+. ++ .+... .++..+.........+... ...+.++ .+++|+||.
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~------~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~--~~~~~~~-~~~~DvVf~ 71 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEER------DFDAIRPVFFSTSQLGQAAPSFGGTTGTLQ--DAFDLEA-LKALDIIVT 71 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT------GGGGSEEEEEESSSTTSBCCGGGTCCCBCE--ETTCHHH-HHTCSEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcC------CCCeEEEEEEEeCCCCCCccccCCCceEEE--ecCChHH-hcCCCEEEE
Confidence 57999999 99999999994 4443 33 33322 2221111100000111110 0113344 578999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCc--EEEEecC
Q 014834 185 LISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~ga--iLi~a~G 213 (417)
|+|.....+..+.+.. .|. +|++.++
T Consensus 72 a~g~~~s~~~a~~~~~---~G~k~vVID~ss 99 (367)
T 1t4b_A 72 CQGGDYTNEIYPKLRE---SGWQGYWIDAAS 99 (367)
T ss_dssp CSCHHHHHHHHHHHHH---TTCCCEEEECSS
T ss_pred CCCchhHHHHHHHHHH---CCCCEEEEcCCh
Confidence 9998777777766543 454 7777665
No 409
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.93 E-value=0.65 Score=45.08 Aligned_cols=92 Identities=16% Similarity=0.107 Sum_probs=60.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCc-CC-HH---hhc-----C
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GD-IY---ETI-----S 177 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~-~s-~~---Ea~-----~ 177 (417)
.| ++|.|+|.|.+|...++-++.. |.+|++..++ +...+.+++.|.... +... .+ .+ +.. .
T Consensus 168 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 168 LG-TTVLVIGAGPIGLVSVLAAKAY------GAFVVCTARS-PRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESC-HHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEcCC-HHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCC
Confidence 56 8999999999999999999888 9887655544 455677888886320 1110 11 11 222 3
Q ss_pred cCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 178 ~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
..|+||-++.... .++.....++++-.++..
T Consensus 240 g~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 240 LPNVTIDCSGNEK---CITIGINITRTGGTLMLV 270 (352)
T ss_dssp CCSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCCEEEECCCCHH---HHHHHHHHHhcCCEEEEE
Confidence 5899999987642 344445567776655543
No 410
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=92.92 E-value=0.29 Score=48.82 Aligned_cols=70 Identities=9% Similarity=-0.003 Sum_probs=48.7
Q ss_pred hccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecC----ChhhHHH----HHHcCceecCCCcCCHHhhcC
Q 014834 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAE----ARAAGFTEENGTLGDIYETIS 177 (417)
Q Consensus 107 ~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~----~s~s~~~----A~~~G~~~~~~~~~s~~Ea~~ 177 (417)
.|+| .||++||= +++..+++..+..- |.+|.+.... ++...+. +.+.|.... .+.+++ +++
T Consensus 172 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~--~~~d~~-av~ 241 (339)
T 4a8t_A 172 KLED-CKVVFVGDATQVCFSLGLITTKM------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL--VTDDAS-SVE 241 (339)
T ss_dssp CGGG-CEEEEESSCCHHHHHHHHHHHHT------TCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEE--EECCGG-GGT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE--EECChh-HHc
Confidence 5788 99999996 58889999988887 9988776543 1222222 344563210 156788 999
Q ss_pred cCCEEEEcc
Q 014834 178 GSDLVLLLI 186 (417)
Q Consensus 178 ~ADIViLav 186 (417)
+||+|+.-+
T Consensus 242 ~aDvvytd~ 250 (339)
T 4a8t_A 242 GADFLYTDV 250 (339)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEecC
Confidence 999999743
No 411
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.91 E-value=0.21 Score=48.93 Aligned_cols=92 Identities=12% Similarity=0.078 Sum_probs=59.4
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCcee-cCCCcCCHHhhcC-----cCCE
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTE-ENGTLGDIYETIS-----GSDL 181 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~-~~~~~~s~~Ea~~-----~ADI 181 (417)
.| ++|.|+|.|.+|...++-++.. |. .|++..++ +...+.+++.|... .+....+..+.+. ..|+
T Consensus 190 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~~Vi~~~~~-~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 190 PA-SSFVTWGAGAVGLSALLAAKVC------GASIIIAVDIV-ESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp TT-CEEEEESCSHHHHHHHHHHHHH------TCSEEEEEESC-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEECCC-HHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcE
Confidence 46 8999999999999999998888 88 56555544 45567788888632 0111123222222 4799
Q ss_pred EEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 182 VLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 182 ViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
||-++... +.++.....++++-.++..
T Consensus 262 vid~~g~~---~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 262 ALESTGSP---EILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEECSCCH---HHHHHHHHTEEEEEEEEEC
T ss_pred EEECCCCH---HHHHHHHHHHhcCCEEEEe
Confidence 99998753 3344555666676655544
No 412
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.87 E-value=0.23 Score=49.23 Aligned_cols=95 Identities=25% Similarity=0.292 Sum_probs=61.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceecCCCcCC-HHhhc------CcCC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETI------SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s-~~Ea~------~~AD 180 (417)
.| .+|.|+|.|.+|...++-++.. |. .|++..+. +...+.+++.|....+-.-.+ ..+.+ ...|
T Consensus 185 ~g-~~VlV~GaG~vG~~aiqlAk~~------Ga~~Vi~~~~~-~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 185 PG-STVYVAGAGPVGLAAAASARLL------GAAVVIVGDLN-PARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESC-HHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCCeEEEEcCC-HHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCC
Confidence 56 8999999999999999998888 88 56555444 455788888887431111111 22222 2579
Q ss_pred EEEEccCCch------------HHHHHHHHHhcCCCCcEEEEe
Q 014834 181 LVLLLISDAA------------QADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 IViLavpd~~------------~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+||-++.... ....+++....++++-.++..
T Consensus 257 vvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 257 CAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp EEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 9999987542 112455555667676655543
No 413
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.83 E-value=0.49 Score=49.20 Aligned_cols=72 Identities=11% Similarity=0.112 Sum_probs=50.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc-CceecCCCcCCHH---h-hcCcCCEEEEcc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIY---E-TISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~-G~~~~~~~~~s~~---E-a~~~ADIViLav 186 (417)
++|.|||+|..|..+++.|.+. |++|++.+.+ ....+.+.+. |+....|...+.+ + -+++||.|++ +
T Consensus 128 ~hviI~G~g~~g~~la~~L~~~------~~~vvvid~~-~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~-t 199 (565)
T 4gx0_A 128 GHILIFGIDPITRTLIRKLESR------NHLFVVVTDN-YDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA-N 199 (565)
T ss_dssp SCEEEESCCHHHHHHHHHTTTT------TCCEEEEESC-HHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE-C
T ss_pred CeEEEECCChHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE-e
Confidence 5899999999999999999998 9988776654 4455666666 7654323333322 2 3678999998 5
Q ss_pred CCchH
Q 014834 187 SDAAQ 191 (417)
Q Consensus 187 pd~~~ 191 (417)
+++..
T Consensus 200 ~~D~~ 204 (565)
T 4gx0_A 200 LSDPD 204 (565)
T ss_dssp SCHHH
T ss_pred CCcHH
Confidence 54443
No 414
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=92.78 E-value=0.19 Score=52.44 Aligned_cols=92 Identities=15% Similarity=0.169 Sum_probs=57.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc---EEEEEecCChhhHHHHHHcCceecCCCc--CC----HHhhcCcCCEE
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTL--GD----IYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~---~ViVg~r~~s~s~~~A~~~G~~~~~~~~--~s----~~Ea~~~ADIV 182 (417)
+||.|||+|.||..++..|.++ .++ +|++.+..... .+.....|+....-.+ .+ +.+++++.|+|
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~-----~dv~~~~I~vaD~~~~~-~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvV 87 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEK-----FDIKPSQVTIIAAEGTK-VDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFL 87 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-----BCCCGGGEEEEESSCCS-CCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CCCceeEEEEeccchhh-hhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEE
Confidence 5799999999999999999876 134 57777654322 2333344543211111 22 23466667999
Q ss_pred EEccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 183 iLavpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
|.+.++.....+++.... .|.-.++.+
T Consensus 88 IN~s~~~~~l~Im~acle---aGv~YlDTa 114 (480)
T 2ph5_A 88 IDVSIGISSLALIILCNQ---KGALYINAA 114 (480)
T ss_dssp EECCSSSCHHHHHHHHHH---HTCEEEESS
T ss_pred EECCccccCHHHHHHHHH---cCCCEEECC
Confidence 999999877777765432 344444444
No 415
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.72 E-value=0.25 Score=50.89 Aligned_cols=93 Identities=17% Similarity=0.261 Sum_probs=67.1
Q ss_pred hccCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHH-Hc-CceecCCCcCCHHh
Q 014834 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AA-GFTEENGTLGDIYE 174 (417)
Q Consensus 107 ~l~gmkkIgIIG~G----------~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~-~~-G~~~~~~~~~s~~E 174 (417)
.++| +||+|+|+- +-...++..|.+. |.+|.+++..-. +.++ .+ ++.. +.+.+|
T Consensus 319 ~~~~-~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~------g~~v~~~DP~~~---~~~~~~~~~~~~----~~~~~~ 384 (446)
T 4a7p_A 319 DVRG-KTVGILGLTFKPNTDDMRDAPSLSIIAALQDA------GATVKAYDPEGV---EQASKMLTDVEF----VENPYA 384 (446)
T ss_dssp CCTT-CEEEEECCSSSTTSCCCTTCSHHHHHHHHHHT------SCEEEEECSSCH---HHHGGGCSSCCB----CSCHHH
T ss_pred cCCC-CEEEEEEEEeCCCCcccccChHHHHHHHHHHC------CCEEEEECCCCC---HhHHHhcCCceE----ecChhH
Confidence 4688 999999997 7788999999998 999987765422 2222 22 4442 567889
Q ss_pred hcCcCCEEEEccCCchHHH-HHHHHHhcCCCCcEEEEecCc
Q 014834 175 TISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 175 a~~~ADIViLavpd~~~~~-Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+++++|+|+++|.-....+ -++.+...|+. .+|++.-++
T Consensus 385 ~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~-~~i~D~r~~ 424 (446)
T 4a7p_A 385 AADGADALVIVTEWDAFRALDLTRIKNSLKS-PVLVDLRNI 424 (446)
T ss_dssp HHTTBSEEEECSCCTTTTSCCHHHHHTTBSS-CBEECSSCC
T ss_pred HhcCCCEEEEeeCCHHhhcCCHHHHHHhcCC-CEEEECCCC
Confidence 9999999999998766543 24567776754 567766554
No 416
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=92.71 E-value=0.16 Score=50.02 Aligned_cols=88 Identities=20% Similarity=0.171 Sum_probs=57.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHH-HcCceec-CCCcCC---HHhhcCcCCEEE
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEE-NGTLGD---IYETISGSDLVL 183 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~-~~G~~~~-~~~~~s---~~Ea~~~ADIVi 183 (417)
.| ++|.|+|.|.+|...++-++.. |.+|++..++.. ..+.+. +.|.... + ..+ +.++....|+||
T Consensus 187 ~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~~-~~~~~~~~lGa~~v~~--~~~~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PG-KHIGIVGLGGLGHVAVKFAKAF------GSKVTVISTSPS-KKEEALKNFGADSFLV--SRDQEQMQAAAGTLDGII 256 (366)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCGG-GHHHHHHTSCCSEEEE--TTCHHHHHHTTTCEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHhcCCceEEe--ccCHHHHHHhhCCCCEEE
Confidence 67 8999999999999999999988 998877666544 345555 6775320 0 112 233345689999
Q ss_pred EccCCc-hHHHHHHHHHhcCCCCcEEEE
Q 014834 184 LLISDA-AQADNYEKIFSCMKPNSILGL 210 (417)
Q Consensus 184 Lavpd~-~~~~Vl~eI~~~lk~gaiLi~ 210 (417)
-++... .....+ +.|+++-.++.
T Consensus 257 d~~g~~~~~~~~~----~~l~~~G~iv~ 280 (366)
T 1yqd_A 257 DTVSAVHPLLPLF----GLLKSHGKLIL 280 (366)
T ss_dssp ECCSSCCCSHHHH----HHEEEEEEEEE
T ss_pred ECCCcHHHHHHHH----HHHhcCCEEEE
Confidence 998854 333333 34555554443
No 417
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=92.70 E-value=0.3 Score=48.97 Aligned_cols=68 Identities=15% Similarity=0.073 Sum_probs=48.7
Q ss_pred ccCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecC----ChhhHHHHHHc--------CceecCCCcCCHHh
Q 014834 108 FNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAA--------GFTEENGTLGDIYE 174 (417)
Q Consensus 108 l~gmkkIgIIG~G-~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~----~s~s~~~A~~~--------G~~~~~~~~~s~~E 174 (417)
|+| .||+|||=+ ++..+++..+... |++|.+.... ++...+.+++. ++.. +.+++|
T Consensus 186 l~g-lkva~vGD~~nva~Sl~~~l~~l------G~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~----~~d~~e 254 (353)
T 3sds_A 186 LEG-LKIAWVGDANNVLFDLAIAATKM------GVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQ----TTVPEV 254 (353)
T ss_dssp CTT-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEE----ESCHHH
T ss_pred cCC-CEEEEECCCchHHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEE----ECCHHH
Confidence 588 999999976 6888888888777 9988776543 22223334332 3333 578999
Q ss_pred hcCcCCEEEEcc
Q 014834 175 TISGSDLVLLLI 186 (417)
Q Consensus 175 a~~~ADIViLav 186 (417)
++++||+|+.-+
T Consensus 255 av~~aDVvytd~ 266 (353)
T 3sds_A 255 AVKDADVIVTDT 266 (353)
T ss_dssp HTTTCSEEEECC
T ss_pred HhcCCCEEEeCC
Confidence 999999999754
No 418
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.65 E-value=0.15 Score=50.28 Aligned_cols=90 Identities=19% Similarity=0.257 Sum_probs=59.5
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCC---HHhhcCcCCEEEE
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGD---IYETISGSDLVLL 184 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s---~~Ea~~~ADIViL 184 (417)
.| .+|.|+|.|.+|...++-++.. |.+|++..++ +...+.+++.|.... + ..+ .+++....|+||-
T Consensus 194 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~Vi~~~~~-~~~~~~a~~lGa~~vi~--~~~~~~~~~~~~g~Dvvid 263 (369)
T 1uuf_A 194 PG-KKVGVVGIGGLGHMGIKLAHAM------GAHVVAFTTS-EAKREAAKALGADEVVN--SRNADEMAAHLKSFDFILN 263 (369)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESS-GGGHHHHHHHTCSEEEE--TTCHHHHHTTTTCEEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCcEEec--cccHHHHHHhhcCCCEEEE
Confidence 46 8999999999999999999888 9887666655 345677788886420 0 111 2233356899999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
++.... .++.....++++-.++..
T Consensus 264 ~~g~~~---~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 264 TVAAPH---NLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp CCSSCC---CHHHHHTTEEEEEEEEEC
T ss_pred CCCCHH---HHHHHHHHhccCCEEEEe
Confidence 988542 133344566666555543
No 419
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.65 E-value=0.13 Score=48.83 Aligned_cols=90 Identities=21% Similarity=0.180 Sum_probs=59.6
Q ss_pred cCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCc-CCHHhhcCcCCEEEEc
Q 014834 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GDIYETISGSDLVLLL 185 (417)
Q Consensus 109 ~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~-~s~~Ea~~~ADIViLa 185 (417)
.| ++|.|+|. |.+|...++-++.. |.+|++..++.. ..+.+++.|.... +... .+..+.+...|+||-
T Consensus 125 ~g-~~vlV~Ga~G~vG~~~~~~a~~~------Ga~Vi~~~~~~~-~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid- 195 (302)
T 1iz0_A 125 PG-EKVLVQAAAGALGTAAVQVARAM------GLRVLAAASRPE-KLALPLALGAEEAATYAEVPERAKAWGGLDLVLE- 195 (302)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESSGG-GSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-
Confidence 46 89999998 99999999999988 988877766543 4566777886420 0000 112233467899999
Q ss_pred cCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 186 ISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 186 vpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+... .++.....++++-.++..
T Consensus 196 ~g~~----~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 196 VRGK----EVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp CSCT----THHHHHTTEEEEEEEEEC
T ss_pred CCHH----HHHHHHHhhccCCEEEEE
Confidence 7763 344555667766555543
No 420
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.62 E-value=0.2 Score=48.47 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=32.5
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~ 149 (417)
-.++| ++|.|||.|..|..-++.|.+. |.+|+|....
T Consensus 9 ~~l~~-k~VLVVGgG~va~rka~~Ll~~------Ga~VtViap~ 45 (274)
T 1kyq_A 9 HQLKD-KRILLIGGGEVGLTRLYKLMPT------GCKLTLVSPD 45 (274)
T ss_dssp ECCTT-CEEEEEEESHHHHHHHHHHGGG------TCEEEEEEEE
T ss_pred EEcCC-CEEEEECCcHHHHHHHHHHHhC------CCEEEEEcCC
Confidence 45789 9999999999999999999999 9988777543
No 421
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=92.58 E-value=0.31 Score=49.97 Aligned_cols=68 Identities=16% Similarity=0.170 Sum_probs=50.1
Q ss_pred ccCCCEEEEEc-----cc---chHHHHHHHHHhhhhhhcCCcEEEEEecCC----hhhHHH----HHHcCc--eecCCCc
Q 014834 108 FNGINQIGVIG-----WG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGF--TEENGTL 169 (417)
Q Consensus 108 l~gmkkIgIIG-----~G---~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~----s~s~~~----A~~~G~--~~~~~~~ 169 (417)
|+| .||+||| +| ++..+++..+... |++|.+..... +...+. +.+.|. .. +
T Consensus 186 l~G-lkva~vgd~~~s~Gd~nnVa~Sli~~l~~l------G~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~----~ 254 (418)
T 2yfk_A 186 LKG-KKVAMTWAYSPSYGKPLSVPQGIVGLMTRL------GMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTK----T 254 (418)
T ss_dssp GTT-CEEEEECCCCSSSCCCSHHHHHHHHHHGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEE----E
T ss_pred cCC-CEEEEEeccccccCccchHHHHHHHHHHHc------CCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEE----E
Confidence 778 8999997 34 4999999999888 99988776542 222222 344664 33 5
Q ss_pred CCHHhhcCcCCEEEEcc
Q 014834 170 GDIYETISGSDLVLLLI 186 (417)
Q Consensus 170 ~s~~Ea~~~ADIViLav 186 (417)
.+++|++++||+|+.-+
T Consensus 255 ~d~~eav~~ADVVytd~ 271 (418)
T 2yfk_A 255 NSMAEAFKDADVVYPKS 271 (418)
T ss_dssp SCHHHHHTTCSEEEECC
T ss_pred cCHHHHhcCCCEEEEcc
Confidence 78999999999999875
No 422
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=92.55 E-value=0.28 Score=49.17 Aligned_cols=95 Identities=18% Similarity=0.139 Sum_probs=54.4
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEec-C-ChhhHHHHHH----cC------------ceecCC----
Q 014834 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-K-GSRSFAEARA----AG------------FTEENG---- 167 (417)
Q Consensus 110 gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r-~-~s~s~~~A~~----~G------------~~~~~~---- 167 (417)
.|.||||+|+|.+|.-+.+.|.+. .+++|+..++ . +........+ .| +.. ++
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~-----p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v-~g~~i~ 89 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMER-----NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCI-NGKVVK 89 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTC-----SSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEE-TTEEEE
T ss_pred cceEEEEECCCHHHHHHHHHHHcC-----CCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEE-CCeEEE
Confidence 347999999999999999988764 1467654444 2 2111111111 11 000 00
Q ss_pred Cc--CCHHhhc---CcCCEEEEccCCchHHHHHHHHHhcCCCCc--EEEEecC
Q 014834 168 TL--GDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (417)
Q Consensus 168 ~~--~s~~Ea~---~~ADIViLavpd~~~~~Vl~eI~~~lk~ga--iLi~a~G 213 (417)
.. .+++++- .++|+||.|+|.....+..+ .+++.|. +|+.+++
T Consensus 90 v~~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~---~~l~~GakkvVId~pa 139 (354)
T 3cps_A 90 VFQAKDPAEIPWGASGAQIVCESTGVFTTEEKAS---LHLKGGAKKVIISAPP 139 (354)
T ss_dssp EECCSCGGGCCHHHHTCCEEEECSSSCCSHHHHG---GGGTTTCSEEEESSCC
T ss_pred EEecCChHHCCcccCCCCEEEECCCchhhHHHHH---HHHHcCCcEEEEeCCC
Confidence 01 1344431 47899999999877765553 4566676 7775554
No 423
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.51 E-value=0.14 Score=47.65 Aligned_cols=65 Identities=15% Similarity=0.178 Sum_probs=45.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC---HHhhcCc-CCEEEEccC
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISG-SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s---~~Ea~~~-ADIViLavp 187 (417)
|||.|+|.|.+|..+++.|.+. |++|++..|..++. ..++....+.+.+ +.++++. +|+||.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ------GHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 7999999999999999999999 99998877764431 1232211111222 3345666 999998764
No 424
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=92.49 E-value=0.44 Score=45.70 Aligned_cols=75 Identities=19% Similarity=0.105 Sum_probs=50.2
Q ss_pred hccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhh---HHHHH-------HcCceecCCCcCC---H
Q 014834 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS---FAEAR-------AAGFTEENGTLGD---I 172 (417)
Q Consensus 107 ~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s---~~~A~-------~~G~~~~~~~~~s---~ 172 (417)
.+++ ++|.|.|. |-+|.++++.|.+. |++|++..|..... .+... ..++....+.+.+ +
T Consensus 24 ~~~~-~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 96 (352)
T 1sb8_A 24 PAQP-KVWLITGVAGFIGSNLLETLLKL------DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDC 96 (352)
T ss_dssp HHSC-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHH
T ss_pred CccC-CeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHH
Confidence 3666 89999998 99999999999999 99988877754321 11111 1333221112233 4
Q ss_pred HhhcCcCCEEEEccCC
Q 014834 173 YETISGSDLVLLLISD 188 (417)
Q Consensus 173 ~Ea~~~ADIViLavpd 188 (417)
.+++++.|+||.+...
T Consensus 97 ~~~~~~~d~vih~A~~ 112 (352)
T 1sb8_A 97 NNACAGVDYVLHQAAL 112 (352)
T ss_dssp HHHHTTCSEEEECCSC
T ss_pred HHHhcCCCEEEECCcc
Confidence 5678899999998653
No 425
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=92.44 E-value=0.44 Score=48.00 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=60.9
Q ss_pred cCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCH---------------
Q 014834 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI--------------- 172 (417)
Q Consensus 109 ~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~--------------- 172 (417)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++ ....+.+++.|... +.+.
T Consensus 220 ~g-~~VlV~GasG~iG~~a~qla~~~------Ga~vi~~~~~-~~~~~~~~~lGa~~----~i~~~~~~~~~~~~~~~~~ 287 (447)
T 4a0s_A 220 QG-DIVLIWGASGGLGSYAIQFVKNG------GGIPVAVVSS-AQKEAAVRALGCDL----VINRAELGITDDIADDPRR 287 (447)
T ss_dssp TT-CEEEETTTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCCC----EEEHHHHTCCTTGGGCHHH
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCCE----EEecccccccccccccccc
Confidence 46 89999998 99999999999988 9988776654 45567788888642 1111
Q ss_pred ---------H---hh-cCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 173 ---------Y---ET-ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 173 ---------~---Ea-~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+ +. -...|+||-++... .++.....++++-.++..+
T Consensus 288 ~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~----~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 288 VVETGRKLAKLVVEKAGREPDIVFEHTGRV----TFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSEEEECSCHH----HHHHHHHHSCTTCEEEESC
T ss_pred cchhhhHHHHHHHHHhCCCceEEEECCCch----HHHHHHHHHhcCCEEEEEe
Confidence 1 11 13589999988853 4455556677776665443
No 426
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=92.41 E-value=0.12 Score=51.05 Aligned_cols=68 Identities=22% Similarity=0.159 Sum_probs=44.4
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCh-hhHHHHHHcCceecCCCcCC---HHhhcCcCCEE
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGD---IYETISGSDLV 182 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s-~s~~~A~~~G~~~~~~~~~s---~~Ea~~~ADIV 182 (417)
.+.| +||+|||.|..|..+++.+++. |++|++.+.... .....+ ..... ....+ +.+.++++|+|
T Consensus 11 ~~~~-k~IlIlG~G~~g~~la~aa~~~------G~~vi~~d~~~~~~~~~~a--d~~~~--~~~~d~~~l~~~~~~~dvI 79 (389)
T 3q2o_A 11 ILPG-KTIGIIGGGQLGRMMALAAKEM------GYKIAVLDPTKNSPCAQVA--DIEIV--ASYDDLKAIQHLAEISDVV 79 (389)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSTTCTTTTTC--SEEEE--CCTTCHHHHHHHHHTCSEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeCCCCCchHHhC--CceEe--cCcCCHHHHHHHHHhCCEe
Confidence 4677 9999999999999999999998 999887764321 111111 11111 11223 45677788887
Q ss_pred EEc
Q 014834 183 LLL 185 (417)
Q Consensus 183 iLa 185 (417)
...
T Consensus 80 ~~~ 82 (389)
T 3q2o_A 80 TYE 82 (389)
T ss_dssp EES
T ss_pred eec
Confidence 553
No 427
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.40 E-value=0.13 Score=50.45 Aligned_cols=92 Identities=18% Similarity=0.185 Sum_probs=60.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcC-CHHhhc-CcCCEEEEc
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLG-DIYETI-SGSDLVLLL 185 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~-s~~Ea~-~~ADIViLa 185 (417)
.| ++|.|+|.|.+|...++-++.. |.+|++..++. ...+.+++.|.... +.... +..+.+ ...|+||-+
T Consensus 179 ~g-~~VlV~GaG~vG~~~~qlak~~------Ga~Vi~~~~~~-~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~ 250 (360)
T 1piw_A 179 PG-KKVGIVGLGGIGSMGTLISKAM------GAETYVISRSS-RKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVC 250 (360)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESSS-TTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEEC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH-HHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEEC
Confidence 46 8999999999999999999988 98877666554 34677778886420 00001 222333 468999999
Q ss_pred cCC--chHHHHHHHHHhcCCCCcEEEEe
Q 014834 186 ISD--AAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 186 vpd--~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+.. .. .++...+.++++-.++..
T Consensus 251 ~g~~~~~---~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 251 ASSLTDI---DFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp CSCSTTC---CTTTGGGGEEEEEEEEEC
T ss_pred CCCCcHH---HHHHHHHHhcCCCEEEEe
Confidence 875 21 233445566666655533
No 428
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=92.40 E-value=0.12 Score=51.10 Aligned_cols=92 Identities=11% Similarity=0.040 Sum_probs=54.4
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCh--hhHHHHHHcCceecCCCcCCH-HhhcCcCCEEEEcc
Q 014834 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDI-YETISGSDLVLLLI 186 (417)
Q Consensus 111 mkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s--~s~~~A~~~G~~~~~~~~~s~-~Ea~~~ADIViLav 186 (417)
|+||+|+| .|.+|.-+.+.|.+.. -..++++...+..+ +... -.|... .+.+. .+...++|+||+|+
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~---~p~~elv~i~s~~~~G~~~~---~~~~~i---~~~~~~~~~~~~vDvVf~a~ 73 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQERE---FPVDELFLLASERSEGKTYR---FNGKTV---RVQNVEEFDWSQVHIALFSA 73 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTT---CCEEEEEEEECTTTTTCEEE---ETTEEE---EEEEGGGCCGGGCSEEEECS
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCC---CCCEEEEEEECCCCCCCcee---ecCcee---EEecCChHHhcCCCEEEECC
Confidence 37999999 9999999999887650 00235544442211 1100 011110 01111 12346899999999
Q ss_pred CCchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 187 SDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 187 pd~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
|.....+..+... +.|..+++.++-
T Consensus 74 g~~~s~~~a~~~~---~~G~~vId~s~~ 98 (336)
T 2r00_A 74 GGELSAKWAPIAA---EAGVVVIDNTSH 98 (336)
T ss_dssp CHHHHHHHHHHHH---HTTCEEEECSST
T ss_pred CchHHHHHHHHHH---HcCCEEEEcCCc
Confidence 9887777766543 457777877663
No 429
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.36 E-value=0.47 Score=48.57 Aligned_cols=96 Identities=18% Similarity=0.138 Sum_probs=65.9
Q ss_pred hccCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc-------------Cce
Q 014834 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------GFT 163 (417)
Q Consensus 107 ~l~gmkkIgIIG~G----------~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~-------------G~~ 163 (417)
.++| +||+|+|+- +-...++..|.+. |.+|.+++..-.. .+..... ++.
T Consensus 326 ~~~~-~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~------g~~v~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 397 (467)
T 2q3e_A 326 TVTD-KKIAILGFAFKKDTGDTRESSSIYISKYLMDE------GAHLHIYDPKVPR-EQIVVDLSHPGVSEDDQVSRLVT 397 (467)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSSCH-HHHHHHHCC------CHHHHHEE
T ss_pred ccCC-CEEEEEeeccCCCCcchhhChHHHHHHHHHHC------CCEEEEEcCccCH-HHHhhhhccccccccccccCcee
Confidence 3688 999999986 3677888888888 9998887654221 1111111 233
Q ss_pred ecCCCcCCHHhhcCcCCEEEEccCCchHHHH-HHHHHhcCCCCcEEEEecCc
Q 014834 164 EENGTLGDIYETISGSDLVLLLISDAAQADN-YEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 164 ~~~~~~~s~~Ea~~~ADIViLavpd~~~~~V-l~eI~~~lk~gaiLi~a~G~ 214 (417)
. +.+..|+++++|.|+++|.-....++ ++.+...|+...+|++.-++
T Consensus 398 ~----~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~ 445 (467)
T 2q3e_A 398 I----SKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRV 445 (467)
T ss_dssp E----CSSHHHHHTTCSEEEECSCCGGGGGSCHHHHHHHSCSSCEEEESSCT
T ss_pred e----cCCHHHHHhCCcEEEEecCChhhhcCCHHHHHHhcCCCCEEEeCCCc
Confidence 2 34788999999999999998776542 45677777765557766554
No 430
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.35 E-value=0.23 Score=47.92 Aligned_cols=93 Identities=15% Similarity=0.151 Sum_probs=62.2
Q ss_pred cCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHH-HHcCceec-CCCcCCHHhhc-----CcCC
Q 014834 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-RAAGFTEE-NGTLGDIYETI-----SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A-~~~G~~~~-~~~~~s~~Ea~-----~~AD 180 (417)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++.+ ..+.+ ++.|.... |....+..+.+ ...|
T Consensus 149 ~g-~~vlI~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 149 NG-ETVVISGAAGAVGSVAGQIARLK------GCRVVGIAGGAE-KCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESSHH-HHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCce
Confidence 46 89999999 99999999999988 998877766543 45555 77776320 11112233322 2479
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
+||-++.. +.++.....++++-.++..+.
T Consensus 221 ~vi~~~g~----~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 221 VFFDNVGG----EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EEEESSCH----HHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCCc----chHHHHHHHHhhCCEEEEEee
Confidence 99988874 356666677777776665443
No 431
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.34 E-value=0.41 Score=46.48 Aligned_cols=92 Identities=17% Similarity=0.057 Sum_probs=60.5
Q ss_pred cCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCC-cCCHHhhcC-----cCC
Q 014834 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGT-LGDIYETIS-----GSD 180 (417)
Q Consensus 109 ~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~-~~s~~Ea~~-----~AD 180 (417)
.| ++|.|+|. |.+|.++++.++.. |.+|++..++.+ ..+.+++.|.... |-. ..+..+.+. ..|
T Consensus 169 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------Ga~V~~~~~~~~-~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 169 AG-HWVAISGAAGGLGSLAVQYAKAM------GYRVLGIDGGEG-KEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECSTT-HHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CC-CEEEEECCCchHHHHHHHHHHHC------CCcEEEEcCCHH-HHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCC
Confidence 46 89999999 89999999999988 998887776544 3467777775310 101 123333332 479
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+||.++... +.++...+.|+++-.++..
T Consensus 241 ~vi~~~g~~---~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 241 GVINVSVSE---AAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp EEEECSSCH---HHHHHHTTSEEEEEEEEEC
T ss_pred EEEECCCcH---HHHHHHHHHHhcCCEEEEE
Confidence 999888742 3455566667766555533
No 432
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.29 E-value=0.3 Score=47.00 Aligned_cols=92 Identities=14% Similarity=0.106 Sum_probs=60.9
Q ss_pred cCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhc------CcCC
Q 014834 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~------~~AD 180 (417)
.| ++|.|+| .|.+|.+.++.++.. |.+|++..++ ....+.+++.|.... +....+..+.+ ...|
T Consensus 140 ~g-~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 140 PG-EIILFHAAAGGVGSLACQWAKAL------GAKLIGTVSS-PEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEEcCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCce
Confidence 46 8999999 899999999999998 9988776665 344667777775320 11112222222 2579
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+||-++... .+....+.++++-.++..+
T Consensus 212 vvid~~g~~----~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 212 VVYDGVGQD----TWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEESSCGG----GHHHHHTTEEEEEEEEECC
T ss_pred EEEECCChH----HHHHHHHHhcCCCEEEEEe
Confidence 999888763 3445556677766655443
No 433
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=92.29 E-value=0.28 Score=45.80 Aligned_cols=90 Identities=14% Similarity=0.101 Sum_probs=53.5
Q ss_pred hccCCCEEEEEccc---chHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEE
Q 014834 107 AFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 107 ~l~gmkkIgIIG~G---~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIVi 183 (417)
.|+| |++-|-|.+ -+|.++|+.|.+. |.+|++.+|+.....+.++.. .. ... .++..+-
T Consensus 3 ~l~g-K~alVTGaa~~~GIG~aiA~~la~~------Ga~Vvi~~r~~~~~~~~~~~~--~~----~~~-----~~~~~~~ 64 (256)
T 4fs3_A 3 NLEN-KTYVIMGIANKRSIAFGVAKVLDQL------GAKLVFTYRKERSRKELEKLL--EQ----LNQ-----PEAHLYQ 64 (256)
T ss_dssp CCTT-CEEEEECCCSTTCHHHHHHHHHHHT------TCEEEEEESSGGGHHHHHHHH--GG----GTC-----SSCEEEE
T ss_pred CCCC-CEEEEECCCCCchHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHH--Hh----cCC-----CcEEEEE
Confidence 4789 999999975 4999999999999 999988888744332222211 00 000 0111211
Q ss_pred EccC-CchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 184 LLIS-DAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 184 Lavp-d~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+=+. +....++++++...+.+=.+|+..+|+
T Consensus 65 ~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 65 IDVQSDEEVINGFEQIGKDVGNIDGVYHSIAF 96 (256)
T ss_dssp CCTTCHHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred ccCCCHHHHHHHHHHHHHHhCCCCEEEecccc
Confidence 1123 344456777766655333367777775
No 434
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.10 E-value=0.39 Score=47.07 Aligned_cols=93 Identities=14% Similarity=0.102 Sum_probs=61.6
Q ss_pred cCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhc-----CcCCE
Q 014834 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI-----SGSDL 181 (417)
Q Consensus 109 ~gmkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~-----~~ADI 181 (417)
.| ++|.|+| .|.+|...++-++.. |.+|++..++ ....+.+++.|.... +....+..+.+ ...|+
T Consensus 163 ~g-~~VlV~Ga~G~iG~~~~q~a~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~ 234 (362)
T 2c0c_A 163 EG-KKVLVTAAAGGTGQFAMQLSKKA------KCHVIGTCSS-DEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDV 234 (362)
T ss_dssp TT-CEEEETTTTBTTHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred CC-CEEEEeCCCcHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCE
Confidence 46 8999999 799999999999988 9988766665 344677777886420 11112333333 24799
Q ss_pred EEEccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 182 ViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
||-++.. ..++...+.++++-.++..+.
T Consensus 235 vid~~g~----~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 235 VYESVGG----AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEECSCT----HHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCH----HHHHHHHHHHhcCCEEEEEeC
Confidence 9999886 344555566666665554443
No 435
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.09 E-value=0.23 Score=47.89 Aligned_cols=92 Identities=15% Similarity=0.157 Sum_probs=61.3
Q ss_pred cCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhc------CcCC
Q 014834 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~------~~AD 180 (417)
.| ++|.|+| .|.+|.+.++.++.. |.+|++..++ ....+.+++.|.... +....+..+.+ ...|
T Consensus 148 ~g-~~vlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 148 KG-DYVLLFAAAGGVGLILNQLLKMK------GAHTIAVAST-DEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCce
Confidence 56 8999999 899999999999988 9988776665 445668888885420 11112222222 2579
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+||-++... .++.....++++-.++..+
T Consensus 220 ~vid~~g~~----~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 220 ASFDSVGKD----TFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEECCGGG----GHHHHHHHEEEEEEEEECC
T ss_pred EEEECCChH----HHHHHHHHhccCCEEEEEc
Confidence 999998863 3444445666666655443
No 436
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=92.05 E-value=0.34 Score=48.96 Aligned_cols=89 Identities=15% Similarity=0.158 Sum_probs=55.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC-cEEE-EE-ec-CChhhHHHH-------------HHcCceecCCCcCCHH
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVK-VG-LR-KGSRSFAEA-------------RAAGFTEENGTLGDIY 173 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G-~~Vi-Vg-~r-~~s~s~~~A-------------~~~G~~~~~~~~~s~~ 173 (417)
.|||||| .|..|.-+.+-|.+. - +++. +. .+ ...+..... .+.-+.. .+.+
T Consensus 20 ~kVaIvGAtG~vG~ell~lL~~h------p~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~-----~~~~ 88 (381)
T 3hsk_A 20 KKAGVLGATGSVGQRFILLLSKH------PEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQE-----CKPE 88 (381)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC------SSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEE-----SSSC
T ss_pred cEEEEECCCChHHHHHHHHHHcC------CCceEEEeeccccccCCCHHHhcccccccccccccccceEEe-----Cchh
Confidence 6899999 699999999977664 3 3553 22 22 222322211 1111111 1222
Q ss_pred hhcCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 174 ETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 174 Ea~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+.+.++|+||+|+|.....++.+++. +.|..|++.++-
T Consensus 89 ~~~~~~Dvvf~alp~~~s~~~~~~~~---~~G~~VIDlSa~ 126 (381)
T 3hsk_A 89 GNFLECDVVFSGLDADVAGDIEKSFV---EAGLAVVSNAKN 126 (381)
T ss_dssp TTGGGCSEEEECCCHHHHHHHHHHHH---HTTCEEEECCST
T ss_pred hhcccCCEEEECCChhHHHHHHHHHH---hCCCEEEEcCCc
Confidence 14678999999999988888877664 357778877663
No 437
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.04 E-value=0.38 Score=46.72 Aligned_cols=94 Identities=14% Similarity=0.199 Sum_probs=61.0
Q ss_pred cCCCEEEEE-cccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhc-----CcCCEE
Q 014834 109 NGINQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-----SGSDLV 182 (417)
Q Consensus 109 ~gmkkIgII-G~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~-----~~ADIV 182 (417)
.| ++|.|+ |.|.+|.+.++-++.. |.+|++..++ +...+.+++.|....-....+..+.+ ...|+|
T Consensus 150 ~g-~~VlV~gg~G~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EG-KTLLIINGAGGVGSIATQIAKAY------GLRVITTASR-NETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TT-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEECCS-HHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEE
T ss_pred CC-CEEEEEcCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEE
Confidence 68 999999 7999999999999988 9988766554 45567788888642100011222222 247999
Q ss_pred EEccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 183 LLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 183 iLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
|-++.... .++.....++++-.++...+
T Consensus 222 ~d~~g~~~---~~~~~~~~l~~~G~iv~~~~ 249 (346)
T 3fbg_A 222 FCTFNTDM---YYDDMIQLVKPRGHIATIVA 249 (346)
T ss_dssp EESSCHHH---HHHHHHHHEEEEEEEEESSC
T ss_pred EECCCchH---HHHHHHHHhccCCEEEEECC
Confidence 99887432 33444455666665554443
No 438
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.96 E-value=0.34 Score=50.31 Aligned_cols=91 Identities=12% Similarity=0.217 Sum_probs=65.3
Q ss_pred hccCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhc
Q 014834 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI 176 (417)
Q Consensus 107 ~l~gmkkIgIIG~G----------~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~ 176 (417)
.++| +||+|.|+- +-...++..|.+. |.+|.+++..-.. . .++.. +.+.++++
T Consensus 350 ~~~~-~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~------g~~V~~~DP~~~~-~-----~~~~~----~~~~~~~~ 412 (478)
T 3g79_A 350 KMDG-SKVAMLGWAFIKDSDDARNTPSEPYRDLCLKA------GASVMVHDPYVVN-Y-----PGVEI----SDNLEEVV 412 (478)
T ss_dssp CSTT-CEEEEECSSSSTTCSCCTTCTHHHHHHHHHHH------TCEEEEECSSCCC-B-----TTBCE----ESCHHHHH
T ss_pred CCCC-CEEEEEeeecCCCCcchhcCcHHHHHHHHHHC------CCEEEEECCCccc-c-----cCcce----ecCHHHHH
Confidence 4688 999999973 3467888888888 9999877654321 0 11221 35889999
Q ss_pred CcCCEEEEccCCchHHH-HHHHHHhcCC-CCcEEEEecCc
Q 014834 177 SGSDLVLLLISDAAQAD-NYEKIFSCMK-PNSILGLSHGF 214 (417)
Q Consensus 177 ~~ADIViLavpd~~~~~-Vl~eI~~~lk-~gaiLi~a~G~ 214 (417)
++||+|+++|.-....+ -++.+...|+ +..+|++.-++
T Consensus 413 ~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~~~i~D~rn~ 452 (478)
T 3g79_A 413 RNADAIVVLAGHSAYSSLKADWAKKVSAKANPVIIDGRNV 452 (478)
T ss_dssp TTCSEEEECSCCHHHHSCCHHHHHHHHCCSSCEEEESSSC
T ss_pred hcCCEEEEecCCHHHHhhhHHHHHHHhccCCCEEEECCCC
Confidence 99999999999777654 2456777777 36788887765
No 439
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=91.93 E-value=0.15 Score=52.25 Aligned_cols=37 Identities=19% Similarity=0.261 Sum_probs=31.8
Q ss_pred hh-ccCCCEEEEEcccchHHHHHHHHHh-hhhhhcCCcEEEEEecC
Q 014834 106 DA-FNGINQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRK 149 (417)
Q Consensus 106 ~~-l~gmkkIgIIG~G~mG~AiA~~Lr~-s~~~~~~G~~ViVg~r~ 149 (417)
.. |+| ++|+|+|+|++|..+|+.|+. . |.+|+...++
T Consensus 207 ~~~l~g-ktvgI~G~G~VG~~vA~~l~~~~------G~kVv~~sD~ 245 (419)
T 1gtm_A 207 WDTLKG-KTIAIQGYGNAGYYLAKIMSEDF------GMKVVAVSDS 245 (419)
T ss_dssp CSCSTT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEEECS
T ss_pred CcccCC-CEEEEEcCCHHHHHHHHHHHHhc------CCEEEEEeCC
Confidence 44 899 999999999999999999998 7 9988755454
No 440
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=91.93 E-value=0.32 Score=46.66 Aligned_cols=92 Identities=17% Similarity=0.158 Sum_probs=64.2
Q ss_pred ccCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCcee-cCCCcCC-HHhhcCcCCEEEE
Q 014834 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTLGD-IYETISGSDLVLL 184 (417)
Q Consensus 108 l~gmkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~-~~~~~~s-~~Ea~~~ADIViL 184 (417)
-.| .+|.|+| .|.+|...++-++.. |.+|++..+ +...+.+++.|... .+....+ ..+.++..|+||-
T Consensus 151 ~~g-~~vlV~Ga~G~vG~~a~q~a~~~------Ga~vi~~~~--~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 151 KQG-DVVLIHAGAGGVGHLAIQLAKQK------GTTVITTAS--KRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp CTT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEEC--HHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEE
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHc------CCEEEEEec--cchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEE
Confidence 356 8999997 999999999999988 988766543 23377888888642 1111223 5566778999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
++..... +.....++++-.++..+
T Consensus 222 ~~g~~~~----~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 222 LVGGDVG----IQSIDCLKETGCIVSVP 245 (321)
T ss_dssp SSCHHHH----HHHGGGEEEEEEEEECC
T ss_pred CCCcHHH----HHHHHhccCCCEEEEeC
Confidence 9885432 44556777776665444
No 441
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.92 E-value=0.16 Score=49.59 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=29.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC
Q 014834 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (417)
Q Consensus 111 mkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~ 149 (417)
||||+|||-|..|..++..+++. |+++++.+..
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~------G~~vv~vd~~ 33 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKA------GMKVVLVDKN 33 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC
Confidence 79999999999999999999998 9998776543
No 442
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=91.89 E-value=0.42 Score=48.71 Aligned_cols=71 Identities=15% Similarity=0.133 Sum_probs=50.2
Q ss_pred hccCCCEEEEEcc-----c---chHHHHHHHHHhhhhhhcCCcEEEEEecC----ChhhHH----HHHHcCceecCCCcC
Q 014834 107 AFNGINQIGVIGW-----G---SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFA----EARAAGFTEENGTLG 170 (417)
Q Consensus 107 ~l~gmkkIgIIG~-----G---~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~----~s~s~~----~A~~~G~~~~~~~~~ 170 (417)
.|+| +||+|||. | ++..+++..+..- |++|.+.... .+...+ .+.+.|.... .+.
T Consensus 188 ~l~G-lkva~vgd~~~~~G~~nnVa~Sli~~~~~l------G~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~--~~~ 258 (399)
T 3q98_A 188 NLKG-KKIAMTWAYSPSYGKPLSVPQGIIGLMTRF------GMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFR--QVT 258 (399)
T ss_dssp GGTT-CEEEEECCCCSSCCCCTHHHHHHHHHHGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EES
T ss_pred ccCC-CEEEEEEecccccCcchHHHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE--EEc
Confidence 4678 89999984 4 7889999998887 9998776543 222222 2345564310 157
Q ss_pred CHHhhcCcCCEEEEcc
Q 014834 171 DIYETISGSDLVLLLI 186 (417)
Q Consensus 171 s~~Ea~~~ADIViLav 186 (417)
+++|++++||+|..-+
T Consensus 259 d~~eav~~aDvVytd~ 274 (399)
T 3q98_A 259 SMEEAFKDADIVYPKS 274 (399)
T ss_dssp CHHHHHTTCSEEEECC
T ss_pred CHHHHhCCCCEEEecC
Confidence 8999999999999865
No 443
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=91.84 E-value=0.34 Score=43.64 Aligned_cols=74 Identities=15% Similarity=0.197 Sum_probs=49.2
Q ss_pred ccCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCc--EEEEEecCChhhHHHHHHcCceecCCCc---CCHHhhcCcCCE
Q 014834 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTL---GDIYETISGSDL 181 (417)
Q Consensus 108 l~gmkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~--~ViVg~r~~s~s~~~A~~~G~~~~~~~~---~s~~Ea~~~ADI 181 (417)
+++ |+|.|.| .|.+|.++++.|.+. |. +|++..|+.++..+.. ..++......+ .+.+++++..|+
T Consensus 16 m~~-~~vlVtGasg~iG~~l~~~L~~~------G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 16 MQN-KSVFILGASGETGRVLLKEILEQ------GLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp HTC-CEEEEECTTSHHHHHHHHHHHHH------TCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred hcC-CeEEEECCCcHHHHHHHHHHHcC------CCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHHHHHHHhcCCCE
Confidence 567 8999999 699999999999999 98 9988877643221111 11221100111 234567788999
Q ss_pred EEEccCCc
Q 014834 182 VLLLISDA 189 (417)
Q Consensus 182 ViLavpd~ 189 (417)
||.+....
T Consensus 88 vi~~ag~~ 95 (242)
T 2bka_A 88 GFCCLGTT 95 (242)
T ss_dssp EEECCCCC
T ss_pred EEECCCcc
Confidence 99987643
No 444
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=91.84 E-value=0.41 Score=46.02 Aligned_cols=92 Identities=17% Similarity=0.155 Sum_probs=59.9
Q ss_pred cCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCcee-cCCCc-CCHHhhcC-----cCC
Q 014834 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTL-GDIYETIS-----GSD 180 (417)
Q Consensus 109 ~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~-~~~~~-~s~~Ea~~-----~AD 180 (417)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++. ...+.+++.|... .|-.. .+..+.+. ..|
T Consensus 145 ~g-~~vlV~Ga~ggiG~~~~~~~~~~------G~~V~~~~~~~-~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 145 GG-ETVLVSAAAGAVGSVVGQIAKLK------GCKVVGAAGSD-EKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SS-CEEEEESTTBHHHHHHHHHHHHT------TCEEEEEESSH-HHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CC-CEEEEecCCCcHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCe
Confidence 46 89999998 99999999999998 99887776653 3455667777521 01111 23333322 479
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+||.++... .++.....++++-.++..+
T Consensus 217 ~vi~~~g~~----~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 217 CYFDNVGGE----FLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEESSCHH----HHHHHHTTEEEEEEEEECC
T ss_pred EEEECCChH----HHHHHHHHHhcCCEEEEEe
Confidence 998888742 3555566677766555443
No 445
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.78 E-value=0.32 Score=46.33 Aligned_cols=69 Identities=29% Similarity=0.220 Sum_probs=44.9
Q ss_pred hhhccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC---HHhhcCcCC
Q 014834 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSD 180 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s---~~Ea~~~AD 180 (417)
...+++ |+|.|.|. |-+|.++++.|.+. |++|++..|.... .++......+.+ ..++++++|
T Consensus 14 ~~~~~~-~~vlVtGatG~iG~~l~~~L~~~------G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d 79 (347)
T 4id9_A 14 LVPRGS-HMILVTGSAGRVGRAVVAALRTQ------GRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVS 79 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHT------TCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCS
T ss_pred ccccCC-CEEEEECCCChHHHHHHHHHHhC------CCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCC
Confidence 356777 99999997 99999999999999 9999877776433 222211111223 456788999
Q ss_pred EEEEccC
Q 014834 181 LVLLLIS 187 (417)
Q Consensus 181 IViLavp 187 (417)
+||.+..
T Consensus 80 ~vih~A~ 86 (347)
T 4id9_A 80 AVLHLGA 86 (347)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9998754
No 446
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.71 E-value=0.82 Score=47.11 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=66.4
Q ss_pred hccCCCEEEEEcc----------cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhh--HHHHHH-cC-------ceecC
Q 014834 107 AFNGINQIGVIGW----------GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS--FAEARA-AG-------FTEEN 166 (417)
Q Consensus 107 ~l~gmkkIgIIG~----------G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s--~~~A~~-~G-------~~~~~ 166 (417)
.++| ++|+|.|+ .+-...++..|.+. |.+|.+++..-... .....+ .+ +..
T Consensus 332 ~~~~-~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~------g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~-- 402 (481)
T 2o3j_A 332 TVTD-KKIAIFGFAFKKNTGDTRESSAIHVIKHLMEE------HAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITV-- 402 (481)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEE--
T ss_pred ccCC-CeEEEEeeeeCCCCCccccChHHHHHHHHHHC------CCEEEEECCCCCchhhHHHHHhhhccccccCceee--
Confidence 4688 99999997 34667778888887 99988776542211 112221 21 232
Q ss_pred CCcCCHHhhcCcCCEEEEccCCchHHHH-HHHHHhcCCCCcEEEEecCc
Q 014834 167 GTLGDIYETISGSDLVLLLISDAAQADN-YEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 167 ~~~~s~~Ea~~~ADIViLavpd~~~~~V-l~eI~~~lk~gaiLi~a~G~ 214 (417)
+.+..|+++++|.|+++|.-.....+ ++.+...|+...+|++.-++
T Consensus 403 --~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~ 449 (481)
T 2o3j_A 403 --ESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLI 449 (481)
T ss_dssp --ESSHHHHHTTCSEEEECSCCGGGTTSCHHHHHHHSCSSCEEEESSSC
T ss_pred --cCCHHHHHcCCCEEEEcCCcHHhhccCHHHHHHhcCCCCEEEECCCC
Confidence 35778899999999999998776542 55677778776677777664
No 447
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=91.69 E-value=1.1 Score=42.51 Aligned_cols=90 Identities=17% Similarity=0.218 Sum_probs=56.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHc----Cc----eecCCCcCCHHhhcCcCC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GF----TEENGTLGDIYETISGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~----G~----~~~~~~~~s~~Ea~~~AD 180 (417)
.| .+|--||||. |.-...-.+.. |.+|+ +.+..+...+.+++. |. ... ..+..+.-...|
T Consensus 90 ~~-~~vLDiGcG~-G~~~~~la~~~------~~~v~-gvD~s~~~~~~a~~~~~~~~~~~~v~~~---~~d~~~~~~~fD 157 (318)
T 2fk8_A 90 PG-MTLLDIGCGW-GTTMRRAVERF------DVNVI-GLTLSKNQHARCEQVLASIDTNRSRQVL---LQGWEDFAEPVD 157 (318)
T ss_dssp TT-CEEEEESCTT-SHHHHHHHHHH------CCEEE-EEESCHHHHHHHHHHHHTSCCSSCEEEE---ESCGGGCCCCCS
T ss_pred Cc-CEEEEEcccc-hHHHHHHHHHC------CCEEE-EEECCHHHHHHHHHHHHhcCCCCceEEE---ECChHHCCCCcC
Confidence 46 7999999998 43322223333 55664 555545445555442 32 211 234444436789
Q ss_pred EEEEc-----cCCchHHHHHHHHHhcCCCCcEEEE
Q 014834 181 LVLLL-----ISDAAQADNYEKIFSCMKPNSILGL 210 (417)
Q Consensus 181 IViLa-----vpd~~~~~Vl~eI~~~lk~gaiLi~ 210 (417)
+|+.. +++.....+++++...|+||-.+++
T Consensus 158 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 158 RIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 99987 6666677899999999999886653
No 448
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.66 E-value=0.27 Score=47.85 Aligned_cols=90 Identities=16% Similarity=0.177 Sum_probs=59.6
Q ss_pred cCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhc------CcCC
Q 014834 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~------~~AD 180 (417)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++. ...+.+++.|.... +.. .+..+.+ ...|
T Consensus 159 ~g-~~VlV~Gasg~iG~~~~~~a~~~------Ga~Vi~~~~~~-~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 159 AG-ETVLVLGAAGGIGTAAIQIAKGM------GAKVIAVVNRT-AATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVD 229 (342)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESSG-GGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCCH-HHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCce
Confidence 46 89999998 99999999999988 99887766654 44677777776421 111 2333222 2589
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+||-++... .++.....++++-.++..
T Consensus 230 vvid~~g~~----~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 230 MVVDPIGGP----AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEESCC------CHHHHHHTEEEEEEEEEC
T ss_pred EEEECCchh----HHHHHHHhhcCCCEEEEE
Confidence 999998864 344455566666655544
No 449
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=91.65 E-value=1.2 Score=39.23 Aligned_cols=92 Identities=14% Similarity=0.052 Sum_probs=56.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH----cCc---eecCCCcCCHHh---hcCc
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGF---TEENGTLGDIYE---TISG 178 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~----~G~---~~~~~~~~s~~E---a~~~ 178 (417)
.| .+|.-||+|. |. ++..|.+. +.+.+|+ +.+.++...+.+++ .|+ ... ..+..+ ....
T Consensus 40 ~~-~~vLDiG~G~-G~-~~~~la~~----~~~~~v~-~vD~s~~~~~~a~~~~~~~~~~~v~~~---~~d~~~~~~~~~~ 108 (204)
T 3e05_A 40 DD-LVMWDIGAGS-AS-VSIEASNL----MPNGRIF-ALERNPQYLGFIRDNLKKFVARNVTLV---EAFAPEGLDDLPD 108 (204)
T ss_dssp TT-CEEEEETCTT-CH-HHHHHHHH----CTTSEEE-EEECCHHHHHHHHHHHHHHTCTTEEEE---ECCTTTTCTTSCC
T ss_pred CC-CEEEEECCCC-CH-HHHHHHHH----CCCCEEE-EEeCCHHHHHHHHHHHHHhCCCcEEEE---eCChhhhhhcCCC
Confidence 46 8999999997 33 44444444 0024664 55554544555543 232 211 122222 2256
Q ss_pred CCEEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 179 ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
.|+|++..+.....++++++...|+||-.+++.
T Consensus 109 ~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 109 PDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp CSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEE
Confidence 899999887777778999999999999876644
No 450
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=91.61 E-value=0.25 Score=48.20 Aligned_cols=76 Identities=16% Similarity=0.093 Sum_probs=49.7
Q ss_pred hhccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCC-cEEEEEecCChhhHHHHH-HcCceecCCCcCC---HHhhcCcC
Q 014834 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEAR-AAGFTEENGTLGD---IYETISGS 179 (417)
Q Consensus 106 ~~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G-~~ViVg~r~~s~s~~~A~-~~G~~~~~~~~~s---~~Ea~~~A 179 (417)
..+++ |+|.|.|. |.+|.++++.|.+. | ++|++..|......+... ..++....+.+.+ +.++++++
T Consensus 28 ~~~~~-~~ilVtGatG~iG~~l~~~L~~~------g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~ 100 (377)
T 2q1s_A 28 SKLAN-TNVMVVGGAGFVGSNLVKRLLEL------GVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEY 100 (377)
T ss_dssp GGGTT-CEEEEETTTSHHHHHHHHHHHHT------TCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCC
T ss_pred HHhCC-CEEEEECCccHHHHHHHHHHHHc------CCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCC
Confidence 34677 89999995 99999999999998 9 998877765332211110 1222211112233 44677899
Q ss_pred CEEEEccCC
Q 014834 180 DLVLLLISD 188 (417)
Q Consensus 180 DIViLavpd 188 (417)
|+||.+...
T Consensus 101 d~Vih~A~~ 109 (377)
T 2q1s_A 101 DYVFHLATY 109 (377)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999988653
No 451
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.58 E-value=0.22 Score=48.48 Aligned_cols=92 Identities=25% Similarity=0.266 Sum_probs=59.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhc------CcCC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~------~~AD 180 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..+ .+...+.+++.|.... +....+..+.+ ...|
T Consensus 166 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 166 LG-DTVCVIGIGPVGLMSVAGANHL------GAGRIFAVGS-RKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHTT------TCSSEEEECC-CHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCcEEEEECC-CHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCC
Confidence 46 8999999999999999999988 88 6765544 3455788888886421 11111222222 1489
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+||-++.... .++.....++++-.++..
T Consensus 238 ~v~d~~g~~~---~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 238 KVVIAGGDVH---TFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EEEECSSCTT---HHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCChH---HHHHHHHHHhcCCEEEEe
Confidence 9999988632 233344456666655544
No 452
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=91.57 E-value=0.51 Score=46.47 Aligned_cols=72 Identities=11% Similarity=0.072 Sum_probs=51.6
Q ss_pred hccCCCEEEEEcc---cchHHHHHHHHHhhhhhhcCCcEEEEEecC----ChhhHHHHHHcCceecCCCcCCHHhhcCcC
Q 014834 107 AFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAAGFTEENGTLGDIYETISGS 179 (417)
Q Consensus 107 ~l~gmkkIgIIG~---G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~----~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~A 179 (417)
.|+| .||++||= +++..+++..+... .|++|.+.... +....+.+++.|.... .+.+++|++++|
T Consensus 151 ~l~g-l~va~vGD~~~~rva~Sl~~~~~~~-----~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~a 222 (310)
T 3csu_A 151 RLDN-LHVAMVGDLKYGRTVHSLTQALAKF-----DGNRFYFIAPDALAMPQYILDMLDEKGIAWS--LHSSIEEVMAEV 222 (310)
T ss_dssp CSSS-CEEEEESCTTTCHHHHHHHHHHHTS-----SSCEEEEECCGGGCCCHHHHHHHHHTTCCEE--ECSCGGGTTTTC
T ss_pred CcCC-cEEEEECCCCCCchHHHHHHHHHhC-----CCCEEEEECCcccccCHHHHHHHHHcCCeEE--EEcCHHHHhcCC
Confidence 4788 89999998 48999999888653 17788776543 2223456667775320 157899999999
Q ss_pred CEEEEcc
Q 014834 180 DLVLLLI 186 (417)
Q Consensus 180 DIViLav 186 (417)
|+|+...
T Consensus 223 Dvvyt~~ 229 (310)
T 3csu_A 223 DILYMTR 229 (310)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9999865
No 453
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=91.49 E-value=0.74 Score=45.90 Aligned_cols=37 Identities=14% Similarity=0.151 Sum_probs=31.6
Q ss_pred hhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEec
Q 014834 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r 148 (417)
.+.|++ +||.|||+|-.|.+++++|... |+ ++.+.++
T Consensus 29 ~~kL~~-~~VlIvGaGGlGs~va~~La~a------GVg~ItlvD~ 66 (340)
T 3rui_A 29 LDIIKN-TKVLLLGAGTLGCYVSRALIAW------GVRKITFVDN 66 (340)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECC
T ss_pred HHHHhC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEecC
Confidence 467889 9999999999999999999998 87 5655543
No 454
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=91.45 E-value=0.43 Score=49.22 Aligned_cols=36 Identities=25% Similarity=0.392 Sum_probs=30.7
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEE-EEec
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLR 148 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-Vg~r 148 (417)
..++| ++|+|.|+|++|...|+.|.+. |..|+ |.+.
T Consensus 231 ~~l~g-~~vaVqGfGnVG~~~a~~L~e~------GakvVavsD~ 267 (440)
T 3aog_A 231 LQVEG-ARVAIQGFGNVGNAAARAFHDH------GARVVAVQDH 267 (440)
T ss_dssp CCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEECS
T ss_pred CCccC-CEEEEeccCHHHHHHHHHHHHC------CCEEEEEEcC
Confidence 36889 9999999999999999999998 88776 4443
No 455
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=91.43 E-value=1.1 Score=40.53 Aligned_cols=47 Identities=21% Similarity=0.167 Sum_probs=37.8
Q ss_pred cccccchhhccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChh
Q 014834 99 DLFKLLPDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR 152 (417)
Q Consensus 99 ~~f~~~~~~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~ 152 (417)
|.+...+..++| |++-|.|. |-+|.++++.|.+. |.+|++..|+..+
T Consensus 3 ~~~~~~~~~l~~-k~vlITGas~gIG~~ia~~l~~~------G~~V~~~~r~~~~ 50 (247)
T 3i1j_A 3 FDYSAHPELLKG-RVILVTGAARGIGAAAARAYAAH------GASVVLLGRTEAS 50 (247)
T ss_dssp CCCCCCTTTTTT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESCHHH
T ss_pred CCCCCCCccCCC-CEEEEeCCCChHHHHHHHHHHHC------CCEEEEEecCHHH
Confidence 344545677899 99999996 68999999999999 9999888776443
No 456
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=91.40 E-value=0.2 Score=47.87 Aligned_cols=76 Identities=13% Similarity=0.051 Sum_probs=50.7
Q ss_pred hhhccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHH-cCceecCCCcCC---HHhhcC--
Q 014834 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGD---IYETIS-- 177 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~-~G~~~~~~~~~s---~~Ea~~-- 177 (417)
++.++| |+|.|.|. |-+|.++++.|.+. |++|++..|......+...+ .++......+.+ +.++++
T Consensus 15 ~~~~~~-~~vlVTGasG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~ 87 (330)
T 2pzm_A 15 VPRGSH-MRILITGGAGCLGSNLIEHWLPQ------GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF 87 (330)
T ss_dssp CSTTTC-CEEEEETTTSHHHHHHHHHHGGG------TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc
Confidence 678899 89999997 99999999999999 99998877753321110011 122211111233 445677
Q ss_pred cCCEEEEccC
Q 014834 178 GSDLVLLLIS 187 (417)
Q Consensus 178 ~ADIViLavp 187 (417)
..|+||.+..
T Consensus 88 ~~D~vih~A~ 97 (330)
T 2pzm_A 88 KPTHVVHSAA 97 (330)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 8999999864
No 457
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=91.37 E-value=0.25 Score=47.97 Aligned_cols=68 Identities=12% Similarity=0.090 Sum_probs=43.1
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCc-------EEEEEecCCh--hhHHHHHH--c---CceecC-CCcCCHHhh
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKVGLRKGS--RSFAEARA--A---GFTEEN-GTLGDIYET 175 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~-------~ViVg~r~~s--~s~~~A~~--~---G~~~~~-~~~~s~~Ea 175 (417)
+||.|+|. |.+|.+++..|... |+ +|++.++... +....+.+ . .+.. | ....+..++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~------g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~-di~~~~~~~~a 77 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG------EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLA-GLEATDDPKVA 77 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEE-EEEEESCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccC-CeEeccChHHH
Confidence 68999996 99999999999987 75 6766555321 11111111 1 1110 0 002456788
Q ss_pred cCcCCEEEEcc
Q 014834 176 ISGSDLVLLLI 186 (417)
Q Consensus 176 ~~~ADIViLav 186 (417)
++++|+||.+.
T Consensus 78 ~~~~D~Vih~A 88 (327)
T 1y7t_A 78 FKDADYALLVG 88 (327)
T ss_dssp TTTCSEEEECC
T ss_pred hCCCCEEEECC
Confidence 99999999873
No 458
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.33 E-value=0.39 Score=46.48 Aligned_cols=92 Identities=17% Similarity=0.129 Sum_probs=60.8
Q ss_pred cCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhc------CcCC
Q 014834 109 NGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG~G-~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~------~~AD 180 (417)
.| ++|.|+|.| .+|.+.++-++.. |.+|++..++.+ ..+.+++.|.... +....+..+.+ ...|
T Consensus 144 ~g-~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~~~-~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~D 215 (340)
T 3gms_A 144 RN-DVLLVNACGSAIGHLFAQLSQIL------NFRLIAVTRNNK-HTEELLRLGAAYVIDTSTAPLYETVMELTNGIGAD 215 (340)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESSST-THHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEeCCccHHHHHHHHHHHHc------CCEEEEEeCCHH-HHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCc
Confidence 56 899999998 8999999999988 998877776544 4677777776420 11112332222 2589
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
+||-++......+. ...++++-.++..+
T Consensus 216 vvid~~g~~~~~~~----~~~l~~~G~iv~~G 243 (340)
T 3gms_A 216 AAIDSIGGPDGNEL----AFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEESSCHHHHHHH----HHTEEEEEEEEECC
T ss_pred EEEECCCChhHHHH----HHHhcCCCEEEEEe
Confidence 99999886544333 35667766655443
No 459
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=91.30 E-value=0.27 Score=46.33 Aligned_cols=66 Identities=17% Similarity=0.184 Sum_probs=45.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCc--CCHHhhcCcCCEEEEccC
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL--GDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~--~s~~Ea~~~ADIViLavp 187 (417)
|+|.|.| .|.+|..+++.|.+. |++|++..|.. ...+ .. ++....+.+ .++.++++++|+||.+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~-~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND------GNTPIILTRSI-GNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCC-C--------CCEEEECCCCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhC------CCEEEEEeCCC-Cccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEccc
Confidence 7999999 699999999999999 99998877762 2222 11 433211111 234567889999998864
No 460
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.26 E-value=0.36 Score=47.10 Aligned_cols=92 Identities=18% Similarity=0.215 Sum_probs=60.4
Q ss_pred cCCCEEEEE-cccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhc-----CcCCE
Q 014834 109 NGINQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI-----SGSDL 181 (417)
Q Consensus 109 ~gmkkIgII-G~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~-----~~ADI 181 (417)
.| ++|.|+ |.|.+|.+.++.++.. |.+|++..++. ...+.+++.|.... +....+..+.+ ...|+
T Consensus 167 ~g-~~VlV~Gg~g~iG~~~~~~a~~~------Ga~Vi~~~~~~-~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 167 EG-ESVLIHGGTSGIGTTAIQLARAF------GAEVYATAGST-GKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESSH-HHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEE
T ss_pred CC-CEEEEEcCCCHHHHHHHHHHHHc------CCEEEEEeCCH-HHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceE
Confidence 46 899999 6899999999999988 99887776653 44677777775420 11112333333 25899
Q ss_pred EEEccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 182 ViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
||-++.... ++.....++++-.++..+
T Consensus 239 vid~~g~~~----~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 239 ILDMIGAAY----FERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEESCCGGG----HHHHHHTEEEEEEEEECC
T ss_pred EEECCCHHH----HHHHHHHhccCCEEEEEE
Confidence 999988653 344445666666555443
No 461
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=91.22 E-value=1 Score=43.86 Aligned_cols=71 Identities=20% Similarity=0.259 Sum_probs=47.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhH-HHHHH-cCceecCCC-cCC---HHhhcCcCCEEEE
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AEARA-AGFTEENGT-LGD---IYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~-~~A~~-~G~~~~~~~-~~s---~~Ea~~~ADIViL 184 (417)
|+|.|.|. |.+|.++++.|.+. |++|++..|+.++.. +.... .++....+. +.+ +.++++++|+||.
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~ 79 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAV------GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 79 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHT------TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence 78999995 99999999999998 999887777654321 11111 133221112 223 4567889999997
Q ss_pred ccCC
Q 014834 185 LISD 188 (417)
Q Consensus 185 avpd 188 (417)
+...
T Consensus 80 ~a~~ 83 (352)
T 1xgk_A 80 NTTS 83 (352)
T ss_dssp CCCS
T ss_pred cCCC
Confidence 7653
No 462
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=91.22 E-value=0.36 Score=46.74 Aligned_cols=84 Identities=13% Similarity=0.172 Sum_probs=52.9
Q ss_pred ccccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC
Q 014834 98 RDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS 177 (417)
Q Consensus 98 ~~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~ 177 (417)
.++|.......+| +||++||+- .....+++. +.++.|..++.. .|..+ ....+++++
T Consensus 129 ~d~~~~~~~~~~g-~kV~vIG~f----P~i~~~~~~------~~~l~V~E~~p~--------~g~~p----~~~~~~~lp 185 (270)
T 3l5o_A 129 NDPFIMSQNEVKG-KKVGVVGHF----PHLESLLEP------ICDLSILEWSPE--------EGDYP----LPASEFILP 185 (270)
T ss_dssp CCHHHHTTTTTTT-SEEEEESCC----TTHHHHHTT------TSEEEEEESSCC--------TTCEE----GGGHHHHGG
T ss_pred cCchhhhhcccCC-CEEEEECCc----hhHHHHHhc------CCCEEEEECCCC--------CCCCC----hhHHHHhhc
Confidence 4456555677889 999999974 445667777 778888887632 34332 234567899
Q ss_pred cCCEEEEccCCchHHHHHHHHHhcCCCC
Q 014834 178 GSDLVLLLISDAAQADNYEKIFSCMKPN 205 (417)
Q Consensus 178 ~ADIViLavpd~~~~~Vl~eI~~~lk~g 205 (417)
+||+||+.-. ......++.|..+.++.
T Consensus 186 ~~D~viiTgs-tlvN~Tl~~lL~~~~~a 212 (270)
T 3l5o_A 186 ECDYVYITCA-SVVDKTLPRLLELSRNA 212 (270)
T ss_dssp GCSEEEEETH-HHHHTCHHHHHHHTTTS
T ss_pred cCCEEEEEee-hhhcCCHHHHHhhCCCC
Confidence 9999987532 22223444455444443
No 463
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.03 E-value=0.52 Score=45.95 Aligned_cols=93 Identities=14% Similarity=0.089 Sum_probs=59.1
Q ss_pred ccCCCEEEEEcccchHHHH-HHHH-HhhhhhhcCCcE-EEEEecCCh--hhHHHHHHcCceecCCCcCCHHhhcC----c
Q 014834 108 FNGINQIGVIGWGSQGPAQ-AQNL-RDSLAEAKSDIV-VKVGLRKGS--RSFAEARAAGFTEENGTLGDIYETIS----G 178 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~Ai-A~~L-r~s~~~~~~G~~-ViVg~r~~s--~s~~~A~~~G~~~~~~~~~s~~Ea~~----~ 178 (417)
+++ ++|.|+|.|.+|... ++-+ +.. |.+ |++..++.+ ...+.+++.|....+....+..+ +. .
T Consensus 171 ~~~-~~VlV~GaG~vG~~a~iqla~k~~------Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~gg 242 (357)
T 2b5w_A 171 WDP-SSAFVLGNGSLGLLTLAMLKVDDK------GYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED-VPDVYEQ 242 (357)
T ss_dssp CCC-CEEEEECCSHHHHHHHHHHHHCTT------CCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSCC
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHHHc------CCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHH-HHHhCCC
Confidence 345 899999999999999 8888 777 886 776666543 04677888897531111112222 22 4
Q ss_pred CCEEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 179 ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
.|+||-++.... .++.....++++-.++..
T Consensus 243 ~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 243 MDFIYEATGFPK---HAIQSVQALAPNGVGALL 272 (357)
T ss_dssp EEEEEECSCCHH---HHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCCChH---HHHHHHHHHhcCCEEEEE
Confidence 799999987542 334444556666555543
No 464
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=90.94 E-value=0.16 Score=50.28 Aligned_cols=90 Identities=17% Similarity=0.116 Sum_probs=51.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCCh--hhHHHHHHcCceecCCCcCCH-HhhcCcCCEEEEccC
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDI-YETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s--~s~~~A~~~G~~~~~~~~~s~-~Ea~~~ADIViLavp 187 (417)
+||+|+| .|.+|..+.+.|.++ ....++++......+ +... -.|... .+.+. .+...++|+||+|+|
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~---~~~~~elv~i~s~~~~g~~~~---~~g~~i---~~~~~~~~~~~~~DvV~~a~g 77 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDER---DFPLHRLHLLASAESAGQRMG---FAESSL---RVGDVDSFDFSSVGLAFFAAA 77 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT---TCCCSCEEEEECTTTTTCEEE---ETTEEE---ECEEGGGCCGGGCSEEEECSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhC---CCCcEEEEEEecCCCCCCccc---cCCcce---EEecCCHHHhcCCCEEEEcCC
Confidence 6899999 899999999998855 000224443332211 1100 011111 01111 123578999999999
Q ss_pred CchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 188 DAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 188 d~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
.....+..+... +.|..+++.++
T Consensus 78 ~~~s~~~a~~~~---~aG~kvId~Sa 100 (340)
T 2hjs_A 78 AEVSRAHAERAR---AAGCSVIDLSG 100 (340)
T ss_dssp HHHHHHHHHHHH---HTTCEEEETTC
T ss_pred cHHHHHHHHHHH---HCCCEEEEeCC
Confidence 887777666543 34766676655
No 465
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=90.93 E-value=1.7 Score=42.72 Aligned_cols=94 Identities=16% Similarity=0.095 Sum_probs=61.1
Q ss_pred ccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCcee-cCCCcCCHHhhc-----CcCC
Q 014834 108 FNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTLGDIYETI-----SGSD 180 (417)
Q Consensus 108 l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~-~~~~~~s~~Ea~-----~~AD 180 (417)
-.| .+|.|+|. |.+|...++-++.. |.+|++.. + +...+.+++.|... .+....+..+.+ ...|
T Consensus 163 ~~g-~~VlV~Ga~G~vG~~a~qla~~~------Ga~Vi~~~-~-~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKP-VYVLVYGGSTATATVTMQMLRLS------GYIPIATC-S-PHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSC-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEE-C-GGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCC-cEEEEECCCcHHHHHHHHHHHHC------CCEEEEEe-C-HHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCcc
Confidence 467 89999999 89999999999988 98876554 3 45578899998642 011112333322 2389
Q ss_pred EEEEccCCchHHHHHHHHHhcC-CCCcEEEEecC
Q 014834 181 LVLLLISDAAQADNYEKIFSCM-KPNSILGLSHG 213 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~l-k~gaiLi~a~G 213 (417)
+||-++.... .++.....+ +++-.++..+.
T Consensus 234 ~v~d~~g~~~---~~~~~~~~l~~~~G~iv~~g~ 264 (371)
T 3gqv_A 234 YALDCITNVE---STTFCFAAIGRAGGHYVSLNP 264 (371)
T ss_dssp EEEESSCSHH---HHHHHHHHSCTTCEEEEESSC
T ss_pred EEEECCCchH---HHHHHHHHhhcCCCEEEEEec
Confidence 9999998643 233334455 46555555443
No 466
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=90.87 E-value=1.1 Score=44.23 Aligned_cols=88 Identities=13% Similarity=0.094 Sum_probs=55.7
Q ss_pred hhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC-------------------hhhH---HHHHHc-
Q 014834 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSF---AEARAA- 160 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~-------------------s~s~---~~A~~~- 160 (417)
+..|++ .+|.|||+|-.|..++++|... |+ ++.+.+... .+.. +...+.
T Consensus 31 q~~L~~-~~VlivG~GGlG~~ia~~La~~------Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln 103 (346)
T 1y8q_A 31 QKRLRA-SRVLLVGLKGLGAEIAKNLILA------GVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN 103 (346)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHHc------CCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC
Confidence 577888 9999999999999999999999 87 666663210 1111 111221
Q ss_pred -Ccee--cCCCc-CCHHhhcCcCCEEEEccCCchHHHHHHHHH
Q 014834 161 -GFTE--ENGTL-GDIYETISGSDLVLLLISDAAQADNYEKIF 199 (417)
Q Consensus 161 -G~~~--~~~~~-~s~~Ea~~~ADIViLavpd~~~~~Vl~eI~ 199 (417)
++.. ..... ....+.+++.|+||.++-+......+.+..
T Consensus 104 p~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~ 146 (346)
T 1y8q_A 104 PMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQIC 146 (346)
T ss_dssp TTSEEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred CCeEEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHH
Confidence 2211 01111 123577889999999987665555565543
No 467
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=90.82 E-value=1.2 Score=41.44 Aligned_cols=45 Identities=9% Similarity=-0.018 Sum_probs=33.8
Q ss_pred cccccchhhccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCC
Q 014834 99 DLFKLLPDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG 150 (417)
Q Consensus 99 ~~f~~~~~~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~ 150 (417)
|-.+.....++| |+|-|.|. |-+|.++++.|.+. |.+|++..|..
T Consensus 20 ~~~~~~~~~l~~-k~vlITGasggIG~~la~~L~~~------G~~V~~~~r~~ 65 (272)
T 1yb1_A 20 GHMPKRRKSVTG-EIVLITGAGHGIGRLTAYEFAKL------KSKLVLWDINK 65 (272)
T ss_dssp -----CCCCCTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred cccCCcccccCC-CEEEEECCCchHHHHHHHHHHHC------CCEEEEEEcCH
Confidence 544544566888 99999984 68999999999999 99988877753
No 468
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=90.78 E-value=1.8 Score=40.86 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=45.3
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCC-hhhH---HHHHHcC-ceecCCCcCC---HHhhcCc--C
Q 014834 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSF---AEARAAG-FTEENGTLGD---IYETISG--S 179 (417)
Q Consensus 111 mkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~-s~s~---~~A~~~G-~~~~~~~~~s---~~Ea~~~--A 179 (417)
||+|.|.| .|-+|.++++.|.+. |++|++..|.. .... +.....+ +....+.+.+ +++++++ .
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 74 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ------GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMP 74 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC------CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCC
Confidence 68999999 699999999999998 99988776632 1111 1111122 2211111233 3456777 9
Q ss_pred CEEEEccCC
Q 014834 180 DLVLLLISD 188 (417)
Q Consensus 180 DIViLavpd 188 (417)
|+||.+...
T Consensus 75 d~vih~A~~ 83 (347)
T 1orr_A 75 DSCFHLAGQ 83 (347)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999988653
No 469
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.67 E-value=0.31 Score=46.61 Aligned_cols=88 Identities=15% Similarity=0.140 Sum_probs=57.7
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd 188 (417)
.| .+|.|+|.|.+|...++-++.. |.+|++.. + +...+.+++.|.... +.+.+++-...|+||-++..
T Consensus 142 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~Vi~~~-~-~~~~~~~~~lGa~~v---~~d~~~v~~g~Dvv~d~~g~ 209 (315)
T 3goh_A 142 KQ-REVLIVGFGAVNNLLTQMLNNA------GYVVDLVS-A-SLSQALAAKRGVRHL---YREPSQVTQKYFAIFDAVNS 209 (315)
T ss_dssp SC-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEC-S-SCCHHHHHHHTEEEE---ESSGGGCCSCEEEEECC---
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEE-C-hhhHHHHHHcCCCEE---EcCHHHhCCCccEEEECCCc
Confidence 56 8999999999999999999988 99887665 4 455788888887531 22322333568999988875
Q ss_pred chHHHHHHHHHhcCCCCcEEEEec
Q 014834 189 AAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 189 ~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
... ......++++-.++..+
T Consensus 210 ~~~----~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 210 QNA----AALVPSLKANGHIICIQ 229 (315)
T ss_dssp --------TTGGGEEEEEEEEEEC
T ss_pred hhH----HHHHHHhcCCCEEEEEe
Confidence 433 34456677766555443
No 470
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.65 E-value=0.54 Score=43.40 Aligned_cols=89 Identities=11% Similarity=0.047 Sum_probs=54.3
Q ss_pred hhccCCCEEEEEcc-cc-hHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEE
Q 014834 106 DAFNGINQIGVIGW-GS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 106 ~~l~gmkkIgIIG~-G~-mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIVi 183 (417)
..++| |++-|.|. |. +|.++++.|.+. |.+|++..|+.++..+...+. . +. ...++.+
T Consensus 18 ~~l~~-k~vlITGasg~GIG~~~a~~l~~~------G~~V~~~~r~~~~~~~~~~~l--~----------~~-~~~~~~~ 77 (266)
T 3o38_A 18 GLLKG-KVVLVTAAAGTGIGSTTARRALLE------GADVVISDYHERRLGETRDQL--A----------DL-GLGRVEA 77 (266)
T ss_dssp STTTT-CEEEESSCSSSSHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHH--H----------TT-CSSCEEE
T ss_pred cCCCC-CEEEEECCCCCchHHHHHHHHHHC------CCEEEEecCCHHHHHHHHHHH--H----------hc-CCCceEE
Confidence 45778 99999998 85 999999999999 999988877643322222211 0 00 1122333
Q ss_pred Ec--cCC-chHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 184 LL--ISD-AAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 184 La--vpd-~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+. +.+ ....++++++.....+=.+|++.+|+
T Consensus 78 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 78 VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCc
Confidence 22 233 33445666666554333477888886
No 471
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=90.65 E-value=0.97 Score=44.84 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=32.0
Q ss_pred hhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEec
Q 014834 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r 148 (417)
++.|++ .+|.|||+|-.|..++++|..+ |+ ++.+.++
T Consensus 113 q~~L~~-~~VlvvG~GglGs~va~~La~a------Gvg~i~lvD~ 150 (353)
T 3h5n_A 113 QDKLKN-AKVVILGCGGIGNHVSVILATS------GIGEIILIDN 150 (353)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEEEC
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHhC------CCCeEEEECC
Confidence 577888 9999999999999999999998 87 5666654
No 472
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=90.59 E-value=0.19 Score=49.85 Aligned_cols=35 Identities=31% Similarity=0.275 Sum_probs=30.5
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~ 149 (417)
+.| +||+|||.|..|..+++.+++. |++|++.+..
T Consensus 10 ~~~-~~IlIlG~G~lg~~la~aa~~l------G~~viv~d~~ 44 (377)
T 3orq_A 10 KFG-ATIGIIGGGQLGKMMAQSAQKM------GYKVVVLDPS 44 (377)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESC
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEECC
Confidence 355 9999999999999999999999 9998877653
No 473
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=90.58 E-value=0.56 Score=47.07 Aligned_cols=70 Identities=9% Similarity=-0.003 Sum_probs=48.7
Q ss_pred hccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecC----ChhhHHH----HHHcCceecCCCcCCHHhhcC
Q 014834 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAE----ARAAGFTEENGTLGDIYETIS 177 (417)
Q Consensus 107 ~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~----~s~s~~~----A~~~G~~~~~~~~~s~~Ea~~ 177 (417)
.|+| .||+|||= +++..+++..+... |.+|.+.... ++.-.+. +++.|.... .+.+++ +++
T Consensus 150 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~-av~ 219 (355)
T 4a8p_A 150 KLED-CKVVFVGDATQVCFSLGLITTKM------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL--VTDDAS-SVE 219 (355)
T ss_dssp CGGG-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEE--EECCGG-GGT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEE--EECCHH-HHc
Confidence 5788 99999995 58899999998887 9988776543 1222222 344563210 146788 999
Q ss_pred cCCEEEEcc
Q 014834 178 GSDLVLLLI 186 (417)
Q Consensus 178 ~ADIViLav 186 (417)
++|+|+.-+
T Consensus 220 ~aDVVytd~ 228 (355)
T 4a8p_A 220 GADFLYTDV 228 (355)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEecc
Confidence 999999743
No 474
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=90.54 E-value=0.55 Score=50.21 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=31.2
Q ss_pred hhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEe
Q 014834 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGL 147 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~ 147 (417)
.+.|++ .+|.|||+|-.|.++|++|... |+ ++.+.+
T Consensus 322 q~kL~~-~kVLIVGaGGLGs~va~~La~a------GVG~ItLvD 358 (598)
T 3vh1_A 322 LDIIKN-TKVLLLGAGTLGCYVSRALIAW------GVRKITFVD 358 (598)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHTT------TCCEEEEEC
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHHc------CCCEEEEEC
Confidence 477888 9999999999999999999998 87 566663
No 475
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=90.54 E-value=0.63 Score=42.87 Aligned_cols=88 Identities=18% Similarity=0.125 Sum_probs=54.3
Q ss_pred hhccCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEE
Q 014834 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViL 184 (417)
+.|+| |++-|.|. |-+|.++++.|.+. |.+|++..|+.++..+.+.+.|... . .-.+|+
T Consensus 2 ~~l~g-k~vlVTGas~gIG~a~a~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~---------~-~~~~Dv--- 61 (247)
T 3rwb_A 2 ERLAG-KTALVTGAAQGIGKAIAARLAAD------GATVIVSDINAEGAKAAAASIGKKA---------R-AIAADI--- 61 (247)
T ss_dssp CTTTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHCTTE---------E-ECCCCT---
T ss_pred CCcCC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHhCCce---------E-EEEcCC---
Confidence 35788 99999996 57999999999999 9999887776444333333322110 0 112332
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+.+....++++++.....+=.+|+..+|+
T Consensus 62 -~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 90 (247)
T 3rwb_A 62 -SDPGSVKALFAEIQALTGGIDILVNNASI 90 (247)
T ss_dssp -TCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred -CCHHHHHHHHHHHHHHCCCCCEEEECCCC
Confidence 22233456676666554333467777776
No 476
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=90.50 E-value=0.51 Score=47.90 Aligned_cols=95 Identities=15% Similarity=0.198 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEE-E-EecCChhhHHHHHHcCceec---CCC---------------
Q 014834 110 GINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVK-V-GLRKGSRSFAEARAAGFTEE---NGT--------------- 168 (417)
Q Consensus 110 gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vi-V-g~r~~s~s~~~A~~~G~~~~---~~~--------------- 168 (417)
+|+||+|+|+ |++|.....-+++. ++ .++|. + ..++-+...+.+++.+.... |..
T Consensus 3 ~m~rI~ILGsTGSIG~~~l~vi~~~-p~---~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~~~~~ 78 (388)
T 1r0k_A 3 QPRTVTVLGATGSIGHSTLDLIERN-LD---RYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVE 78 (388)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHT-GG---GEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSE
T ss_pred CceEEEEECCCeEeHHHHHHHHHhC-cC---cEEEEEEEcCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhccCCcE
Confidence 4689999999 99999999888875 11 14543 2 23332333445555543210 000
Q ss_pred ----cCCHHhhcC-cCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 169 ----LGDIYETIS-GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 169 ----~~s~~Ea~~-~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
.....+++. ..|+|+.+++-....+.. ...++.|+.|+.+
T Consensus 79 v~~g~~~~~el~~~~iDvVV~ai~G~aGl~pt---laAi~aGK~VvlA 123 (388)
T 1r0k_A 79 AAAGADALVEAAMMGADWTMAAIIGCAGLKAT---LAAIRKGKTVALA 123 (388)
T ss_dssp EEESHHHHHHHHTSCCSEEEECCCSGGGHHHH---HHHHHTTSEEEEC
T ss_pred EEeCccHHHHHHcCCCCEEEEeCCCHHHHHHH---HHHHHCCCEEEEe
Confidence 001123432 279999999864433211 2334567766654
No 477
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=90.47 E-value=0.46 Score=39.71 Aligned_cols=92 Identities=18% Similarity=0.125 Sum_probs=54.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcC--cCCEEEEccCCc
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~--~ADIViLavpd~ 189 (417)
+++.|||.|..|..++..|++. .|++++...+.+..... ..-.|+.+. + ..++.+.++ +.|.|++++|..
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~-----~g~~vvg~~d~~~~~~g-~~i~g~pV~-g-~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQG-----KEFHPIAFIDDDRKKHK-TTMQGITIY-R-PKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-----SSEEEEEEECSCGGGTT-CEETTEEEE-C-GGGHHHHHHHHTCCEEEECCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCcEEEEEEECCcccCC-CEecCeEEE-C-HHHHHHHHHHCCCCEEEEeCCCC
Confidence 7899999999999999999874 16777655554332110 011355441 1 234555544 578999999965
Q ss_pred hH---HHHHHHHHhcCCCCcEEEEecCc
Q 014834 190 AQ---ADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 190 ~~---~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
.. .+++..+. +.|.-+.+...+
T Consensus 77 ~~~~~~~i~~~l~---~~gv~v~~vP~~ 101 (141)
T 3nkl_A 77 SQVQKKVIIESLA---KLHVEVLTIPNL 101 (141)
T ss_dssp CHHHHHHHHHHHH---TTTCEEEECCCH
T ss_pred CHHHHHHHHHHHH---HcCCeEEECCCH
Confidence 43 23443332 335455555544
No 478
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=90.37 E-value=0.15 Score=51.68 Aligned_cols=68 Identities=15% Similarity=0.227 Sum_probs=47.4
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhh-HHHHHHcCceecCCCcCCHHhhcCcCCEEEEc
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s-~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLa 185 (417)
+++ |+|.|||+|..|.+.|+-|.+. |++|.+.+.+.... ..... .|+....+. ...+.++.+|+||+.
T Consensus 3 ~~~-~~v~viG~G~~G~~~a~~l~~~------G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~--~~~~~~~~~d~vV~s 71 (439)
T 2x5o_A 3 YQG-KNVVIIGLGLTGLSCVDFFLAR------GVTPRVMDTRMTPPGLDKLP-EAVERHTGS--LNDEWLMAADLIVAS 71 (439)
T ss_dssp CTT-CCEEEECCHHHHHHHHHHHHTT------TCCCEEEESSSSCTTGGGSC-TTSCEEESS--CCHHHHHTCSEEEEC
T ss_pred CCC-CEEEEEeecHHHHHHHHHHHhC------CCEEEEEECCCCcchhHHhh-CCCEEEECC--CcHHHhccCCEEEeC
Confidence 567 8999999999999999999988 99998877653321 11122 576541111 124566689999986
No 479
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=90.35 E-value=0.16 Score=51.12 Aligned_cols=88 Identities=15% Similarity=0.221 Sum_probs=53.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc---EEEEEecC--ChhhHHHHHHcCceecCCCcCCH-HhhcCcCCEEEE
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRK--GSRSFAEARAAGFTEENGTLGDI-YETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~---~ViVg~r~--~s~s~~~A~~~G~~~~~~~~~s~-~Ea~~~ADIViL 184 (417)
.||+||| .|..|.-+.+-|.+. ++ ++...... ..+... -.|... .+.+. .+.++++|+||+
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~------~~p~~el~~~as~~saG~~~~---~~~~~~---~~~~~~~~~~~~~Dvvf~ 70 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEES------TLPIDKIRYLASARSAGKSLK---FKDQDI---TIEETTETAFEGVDIALF 70 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC------CCCEEEEEEEECTTTTTCEEE---ETTEEE---EEEECCTTTTTTCSEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcC------CCCcEEEEEEEccccCCCcce---ecCCCc---eEeeCCHHHhcCCCEEEE
Confidence 5899999 799999999988876 54 33222211 111111 011110 01111 234678999999
Q ss_pred ccCCchHHHHHHHHHhcCCCCcEEEEecCc
Q 014834 185 LISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 185 avpd~~~~~Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
|+|.....+..+.+. +.|..|++.++-
T Consensus 71 a~~~~~s~~~a~~~~---~~G~~vIDlSa~ 97 (366)
T 3pwk_A 71 SAGSSTSAKYAPYAV---KAGVVVVDNTSY 97 (366)
T ss_dssp CSCHHHHHHHHHHHH---HTTCEEEECSST
T ss_pred CCChHhHHHHHHHHH---HCCCEEEEcCCc
Confidence 999887777776654 457778877763
No 480
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.31 E-value=0.47 Score=45.49 Aligned_cols=91 Identities=14% Similarity=0.103 Sum_probs=57.2
Q ss_pred cCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCcee-cCCCcCCHHhh----c--CcCC
Q 014834 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTLGDIYET----I--SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~-~~~~~~s~~Ea----~--~~AD 180 (417)
.| ++|.|+| .|.+|.+.++.++.. |.+|++..++ ....+.+++.|... .|-...+..+. . ...|
T Consensus 140 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 140 PD-EQFLFHAAAGGVGLIACQWAKAL------GAKLIGTVGT-AQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCce
Confidence 46 8999999 799999999999998 9988776665 33456666666431 01111122221 1 2478
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+||.++... .++...+.++++-.++..
T Consensus 212 ~vi~~~g~~----~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 212 VVYDSVGRD----TWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp EEEECSCGG----GHHHHHHTEEEEEEEEEC
T ss_pred EEEECCchH----HHHHHHHHhcCCCEEEEE
Confidence 999888733 344445566666555543
No 481
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=90.26 E-value=0.67 Score=45.40 Aligned_cols=73 Identities=10% Similarity=0.043 Sum_probs=49.4
Q ss_pred hccCCCEEEEEcc---cchHHHHHHHHHhhhhhhcCCcEEEEEecCCh-hhHHHHHHcCceecCCCcCCHHhhcCcCCEE
Q 014834 107 AFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 107 ~l~gmkkIgIIG~---G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s-~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIV 182 (417)
.|+| .||++||= +++..+++..+... .|++|.+.....- .....+++.|.... .+.+++|+++++|+|
T Consensus 146 ~l~g-l~va~vGD~~~~rva~Sl~~~~~~~-----~g~~v~~~~P~~~~~~~~~~~~~g~~~~--~~~d~~eav~~aDvv 217 (299)
T 1pg5_A 146 TIDG-LVFALLGDLKYARTVNSLLRILTRF-----RPKLVYLISPQLLRARKEILDELNYPVK--EVENPFEVINEVDVL 217 (299)
T ss_dssp CSTT-CEEEEEECCSSCHHHHHHHHHGGGS-----CCSEEEEECCGGGCCCHHHHTTCCSCEE--EESCGGGTGGGCSEE
T ss_pred CcCC-cEEEEECCCCCCchHHHHHHHHHhC-----CCCEEEEECCchhcCCHHHHHHcCCeEE--EeCCHHHHhcCCCEE
Confidence 4788 89999998 58999998887643 1788877654321 11122345564310 146899999999999
Q ss_pred EEccC
Q 014834 183 LLLIS 187 (417)
Q Consensus 183 iLavp 187 (417)
+...=
T Consensus 218 yt~~~ 222 (299)
T 1pg5_A 218 YVTRI 222 (299)
T ss_dssp EEECC
T ss_pred EeCCc
Confidence 98754
No 482
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=90.24 E-value=0.11 Score=52.86 Aligned_cols=79 Identities=15% Similarity=0.056 Sum_probs=56.0
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCc---EEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccC
Q 014834 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~---~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavp 187 (417)
.||.|||. |..|..-+.-+..- |. +|.+.+++.. ..|-. . +.+.++|+||.++.
T Consensus 215 ~kV~ViG~~G~vG~~A~~~a~~l------Ga~~~~V~v~D~~~~-------~~g~~-----~----~~i~~aDivIn~vl 272 (394)
T 2qrj_A 215 PTVLIIGALGRCGSGAIDLLHKV------GIPDANILKWDIKET-------SRGGP-----F----DEIPQADIFINCIY 272 (394)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT------TCCGGGEEEECHHHH-------TTCSC-----C----THHHHSSEEEECCC
T ss_pred CeEEEEcCCCHHHHHHHHHHHhC------CCCcCceEEeecccc-------ccCCc-----h----hhHhhCCEEEECcC
Confidence 58999999 99999988888877 87 7887765321 11322 1 34669999999988
Q ss_pred Cch-HHHHH-HHHHhcC-CCCcEEEEec
Q 014834 188 DAA-QADNY-EKIFSCM-KPNSILGLSH 212 (417)
Q Consensus 188 d~~-~~~Vl-~eI~~~l-k~gaiLi~a~ 212 (417)
-.. .+.++ ++....| |||++|+|.+
T Consensus 273 ig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 273 LSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp CCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred cCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 422 22334 3555678 9999999775
No 483
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.17 E-value=1.5 Score=45.32 Aligned_cols=94 Identities=7% Similarity=0.086 Sum_probs=64.6
Q ss_pred hccCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcC------------cee
Q 014834 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG------------FTE 164 (417)
Q Consensus 107 ~l~gmkkIgIIG~G----------~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G------------~~~ 164 (417)
.++| ++|+|+|+- +-...++..|.+. |.+|.+++..-.. +....++ +..
T Consensus 325 ~~~~-~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~------g~~v~~~DP~~~~--~~~~~~~~~~~~~~~~~~~~~~ 395 (478)
T 2y0c_A 325 DLTG-RTFAIWGLAFKPNTDDMREAPSRELIAELLSR------GARIAAYDPVAQE--EARRVIALDLADHPSWLERLSF 395 (478)
T ss_dssp CCTT-CEEEEECCSSSSSCCCCTTCHHHHHHHHHHHT------TCEEEEECTTTHH--HHHHHHHHHTTTCHHHHTTEEE
T ss_pred cCCC-CEEEEEecccCCCCCccccChHHHHHHHHHHC------CCEEEEECCCccH--HHHHhhccccccccccccceee
Confidence 4678 999999973 3456778888887 9998877654222 1111122 432
Q ss_pred cCCCcCCHHhhcCcCCEEEEccCCchHHH-HHHHHHhcCCCCcEEEEecCc
Q 014834 165 ENGTLGDIYETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 165 ~~~~~~s~~Ea~~~ADIViLavpd~~~~~-Vl~eI~~~lk~gaiLi~a~G~ 214 (417)
+.+..+++++||+|++++.-..... -++.+...|+. .+|++.-++
T Consensus 396 ----~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~-~~i~D~r~~ 441 (478)
T 2y0c_A 396 ----VDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKT-PVIFDGRNL 441 (478)
T ss_dssp ----CSSHHHHTTTCSEEEECSCCGGGGSCCHHHHHTTCSS-CEEEESSCC
T ss_pred ----cCCHHHHHhCCCEEEEecCChHhhccCHHHHHhhcCC-CEEEECCCC
Confidence 4578899999999999999877654 24567666654 677877664
No 484
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=90.16 E-value=0.99 Score=41.80 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=47.2
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCC---HHhhcCcCCEEEEccC
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s---~~Ea~~~ADIViLavp 187 (417)
|||.|+| .|.+|.++++.|.+. .|.+|++..|+.++... ....++....+.+.+ +.++++++|+||.+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-----~g~~V~~~~R~~~~~~~-~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 74 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-----HIDHFHIGVRNVEKVPD-DWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPS 74 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-----TCTTEEEEESSGGGSCG-GGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-----CCCcEEEEECCHHHHHH-hhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4799999 599999999998874 16788877776443221 122344322222333 4568899999999876
Q ss_pred C
Q 014834 188 D 188 (417)
Q Consensus 188 d 188 (417)
.
T Consensus 75 ~ 75 (289)
T 3e48_A 75 I 75 (289)
T ss_dssp C
T ss_pred C
Confidence 5
No 485
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.14 E-value=0.57 Score=46.22 Aligned_cols=92 Identities=16% Similarity=0.149 Sum_probs=57.1
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCC-cEEEEEecCChhhHHHHHHcCceec-CCC---cCCHHhhc------C
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEE-NGT---LGDIYETI------S 177 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-~~ViVg~r~~s~s~~~A~~~G~~~~-~~~---~~s~~Ea~------~ 177 (417)
.| ++|.|+|.|.+|...++-++.. | .+|++..++ +...+.+++.|.... +.. ..+..+.+ +
T Consensus 195 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~ 266 (380)
T 1vj0_A 195 AG-KTVVIQGAGPLGLFGVVIARSL------GAENVIVIAGS-PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGR 266 (380)
T ss_dssp BT-CEEEEECCSHHHHHHHHHHHHT------TBSEEEEEESC-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred CC-CEEEEECcCHHHHHHHHHHHHc------CCceEEEEcCC-HHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCC
Confidence 46 8999999999999999999988 9 488776655 445677888886420 100 00111111 1
Q ss_pred cCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 178 ~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
..|+||-++.... .++...+.++++-.++..
T Consensus 267 g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 267 GADFILEATGDSR---ALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp CEEEEEECSSCTT---HHHHHHHHEEEEEEEEEC
T ss_pred CCcEEEECCCCHH---HHHHHHHHHhcCCEEEEE
Confidence 5799998887432 233333445555554433
No 486
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=90.12 E-value=0.58 Score=48.50 Aligned_cols=73 Identities=15% Similarity=0.127 Sum_probs=40.5
Q ss_pred CEEEEEcccchHHH--HHHHHHhhhhhhcCCcEEEEEecCChhhH-------HHHHHcCc--eecCCCcCCHHhhcCcCC
Q 014834 112 NQIGVIGWGSQGPA--QAQNLRDSLAEAKSDIVVKVGLRKGSRSF-------AEARAAGF--TEENGTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~A--iA~~Lr~s~~~~~~G~~ViVg~r~~s~s~-------~~A~~~G~--~~~~~~~~s~~Ea~~~AD 180 (417)
+||+|||.|+.|.+ +...|.....=.+.+.+|+..+....+.. ......|. .. ..+.|.+|++++||
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i--~~t~d~~eAl~gAD 78 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKV--VKTESLDEAIEGAD 78 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEE--EEESCHHHHHTTCS
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEE--EEeCCHHHHhCCCC
Confidence 58999999998755 33334332100111235655554432211 11222332 22 12468899999999
Q ss_pred EEEEcc
Q 014834 181 LVLLLI 186 (417)
Q Consensus 181 IViLav 186 (417)
+||+.+
T Consensus 79 ~Vi~~~ 84 (477)
T 3u95_A 79 FIINTA 84 (477)
T ss_dssp EEEECC
T ss_pred EEEECc
Confidence 999986
No 487
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=90.11 E-value=1.1 Score=48.03 Aligned_cols=38 Identities=13% Similarity=0.121 Sum_probs=32.2
Q ss_pred chhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEec
Q 014834 104 LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (417)
Q Consensus 104 ~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r 148 (417)
+.+.|++ .+|.|||+|-.|..+|++|... |+ ++.+.++
T Consensus 320 g~ekL~~-arVLIVGaGGLGs~vA~~La~a------GVG~ItLvD~ 358 (615)
T 4gsl_A 320 NLDIIKN-TKVLLLGAGTLGCYVSRALIAW------GVRKITFVDN 358 (615)
T ss_dssp CHHHHHT-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECC
T ss_pred hHHHHhC-CeEEEECCCHHHHHHHHHHHHc------CCCEEEEEcC
Confidence 3567899 9999999999999999999998 87 5666554
No 488
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=90.05 E-value=1.3 Score=43.29 Aligned_cols=91 Identities=14% Similarity=0.190 Sum_probs=59.8
Q ss_pred cCCCEEEEEc-ccchHHHHHHHHHh-hhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHhhc-----CcCC
Q 014834 109 NGINQIGVIG-WGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI-----SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG-~G~mG~AiA~~Lr~-s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~Ea~-----~~AD 180 (417)
.| .+|.|+| .|.+|...++-++. . |.+|++..+. ....+.+++.|.... +. ..+..+.+ ...|
T Consensus 171 ~g-~~VlV~Ga~G~vG~~a~qlak~~~------g~~Vi~~~~~-~~~~~~~~~lGad~vi~~-~~~~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 171 AA-PAILIVGGAGGVGSIAVQIARQRT------DLTVIATASR-PETQEWVKSLGAHHVIDH-SKPLAAEVAALGLGAPA 241 (363)
T ss_dssp SE-EEEEEESTTSHHHHHHHHHHHHHC------CSEEEEECSS-HHHHHHHHHTTCSEEECT-TSCHHHHHHTTCSCCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHhc------CCEEEEEeCC-HHHHHHHHHcCCCEEEeC-CCCHHHHHHHhcCCCce
Confidence 56 8999999 99999999998886 5 7787765554 445678888886421 11 11233332 2579
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+||-++... ..++.....++++-.++..
T Consensus 242 vvid~~g~~---~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 242 FVFSTTHTD---KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEECSCHH---HHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCCch---hhHHHHHHHhcCCCEEEEE
Confidence 999988743 2344555567777665544
No 489
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=90.01 E-value=1.5 Score=44.96 Aligned_cols=63 Identities=19% Similarity=0.248 Sum_probs=45.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCEEEEccCC
Q 014834 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADIViLavpd 188 (417)
|||.|.| .|.+|.++++.|.+. |++|++..|...+. ..+.. |- .....++++++|+||.+...
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~------G~~V~~l~R~~~~~------~~v~~-d~-~~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTG------GHEVIQLVRKEPKP------GKRFW-DP-LNPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESSSCCT------TCEEC-CT-TSCCTTTTTTCSEEEECCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCCCCc------cceee-cc-cchhHHhcCCCCEEEECCCC
Confidence 8999999 699999999999999 99998887764431 11221 11 12345678899999987543
No 490
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=89.98 E-value=0.4 Score=46.87 Aligned_cols=89 Identities=21% Similarity=0.147 Sum_probs=57.2
Q ss_pred cCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHH-HcCceec-CCCcCC---HHhhcCcCCEEE
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEE-NGTLGD---IYETISGSDLVL 183 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~-~~G~~~~-~~~~~s---~~Ea~~~ADIVi 183 (417)
.| .+|.|+|.|.+|...++-++.. |.+|++..++.+ ..+.++ +.|.... + ..+ ..++....|+||
T Consensus 180 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~Vi~~~~~~~-~~~~~~~~lGa~~vi~--~~~~~~~~~~~~g~D~vi 249 (357)
T 2cf5_A 180 PG-LRGGILGLGGVGHMGVKIAKAM------GHHVTVISSSNK-KREEALQDLGADDYVI--GSDQAKMSELADSLDYVI 249 (357)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESSTT-HHHHHHTTSCCSCEEE--TTCHHHHHHSTTTEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCeEEEEeCChH-HHHHHHHHcCCceeec--cccHHHHHHhcCCCCEEE
Confidence 67 8999999999999999999988 988877666543 345555 6775320 0 112 223334679999
Q ss_pred EccCCc-hHHHHHHHHHhcCCCCcEEEEe
Q 014834 184 LLISDA-AQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 184 Lavpd~-~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
-++... .... ....++++-.++..
T Consensus 250 d~~g~~~~~~~----~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 250 DTVPVHHALEP----YLSLLKLDGKLILM 274 (357)
T ss_dssp ECCCSCCCSHH----HHTTEEEEEEEEEC
T ss_pred ECCCChHHHHH----HHHHhccCCEEEEe
Confidence 888743 2333 33455665555433
No 491
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=89.90 E-value=2.1 Score=39.69 Aligned_cols=89 Identities=11% Similarity=0.072 Sum_probs=55.3
Q ss_pred cCCCEEEEEcccchHHHHHHHHH-hhhhhhcCCcEEEEEecCChhhHHHHHHc----C----ceecCCCcCCHHhhcCcC
Q 014834 109 NGINQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGSRSFAEARAA----G----FTEENGTLGDIYETISGS 179 (417)
Q Consensus 109 ~gmkkIgIIG~G~mG~AiA~~Lr-~s~~~~~~G~~ViVg~r~~s~s~~~A~~~----G----~~~~~~~~~s~~Ea~~~A 179 (417)
.| .+|--||||.-+.+. .|. .. |.+|+ +.+......+.+++. | +... ..+..+.-...
T Consensus 64 ~~-~~vLDiGcG~G~~~~--~l~~~~------~~~v~-gvd~s~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~~~f 130 (287)
T 1kpg_A 64 PG-MTLLDVGCGWGATMM--RAVEKY------DVNVV-GLTLSKNQANHVQQLVANSENLRSKRVL---LAGWEQFDEPV 130 (287)
T ss_dssp TT-CEEEEETCTTSHHHH--HHHHHH------CCEEE-EEESCHHHHHHHHHHHHTCCCCSCEEEE---ESCGGGCCCCC
T ss_pred Cc-CEEEEECCcccHHHH--HHHHHc------CCEEE-EEECCHHHHHHHHHHHHhcCCCCCeEEE---ECChhhCCCCe
Confidence 45 799999999844333 333 44 66664 555544445555442 2 2211 23444443678
Q ss_pred CEEEEc-----cCCchHHHHHHHHHhcCCCCcEEEE
Q 014834 180 DLVLLL-----ISDAAQADNYEKIFSCMKPNSILGL 210 (417)
Q Consensus 180 DIViLa-----vpd~~~~~Vl~eI~~~lk~gaiLi~ 210 (417)
|+|+.. +++.....+++++...||||-.+++
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEE
Confidence 999876 4555667889999999999886553
No 492
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.89 E-value=0.52 Score=48.02 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=61.2
Q ss_pred hccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-EEEEEecCC----hh-------hHHHHHHcCceecCCCcCCHHh
Q 014834 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG----SR-------SFAEARAAGFTEENGTLGDIYE 174 (417)
Q Consensus 107 ~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~ViVg~r~~----s~-------s~~~A~~~G~~~~~~~~~s~~E 174 (417)
.++. .||.|+|.|.-|.++|+-|... |. +|++.++++ .+ ....++.... .....+++|
T Consensus 185 ~l~d-~kVVi~GAGaAG~~iA~ll~~~------Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~---~~~~~~L~e 254 (398)
T 2a9f_A 185 SLDE-VSIVVNGGGSAGLSITRKLLAA------GATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR---EFKSGTLED 254 (398)
T ss_dssp CTTS-CEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTEECCTTCCCSCCC---CHHHHHSC---TTCCCSCSH
T ss_pred CCCc-cEEEEECCCHHHHHHHHHHHHc------CCCeEEEEECCCcccCCccccchHHHHHHhhccCc---ccchhhHHH
Confidence 3444 6999999999999999999998 88 888887752 11 1122332110 111356899
Q ss_pred hcCcCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 175 TISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 175 a~~~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+++++|++|=+..|.... +++...|+++.+|...
T Consensus 255 av~~ADV~IG~Sapgl~T---~EmVk~Ma~~pIIfal 288 (398)
T 2a9f_A 255 ALEGADIFIGVSAPGVLK---AEWISKMAARPVIFAM 288 (398)
T ss_dssp HHHTTCSEEECCSTTCCC---HHHHHTSCSSCEEEEC
T ss_pred HhccCCEEEecCCCCCCC---HHHHHhhCCCCEEEEC
Confidence 999999988775443321 2455668888887743
No 493
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=89.88 E-value=0.68 Score=47.37 Aligned_cols=36 Identities=19% Similarity=0.130 Sum_probs=30.2
Q ss_pred hhccCCCEEEEEcccchHHHHHHHHHh-hhhhhcCCcEEE-EEec
Q 014834 106 DAFNGINQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVK-VGLR 148 (417)
Q Consensus 106 ~~l~gmkkIgIIG~G~mG~AiA~~Lr~-s~~~~~~G~~Vi-Vg~r 148 (417)
..++| ++|+|.|+|++|...++.|.+ . |..|+ +.+.
T Consensus 205 ~~l~g-~~vaVqG~GnVG~~~a~~L~e~~------GakvVavsD~ 242 (415)
T 2tmg_A 205 IDPKK-ATVAVQGFGNVGQFAALLISQEL------GSKVVAVSDS 242 (415)
T ss_dssp CCTTT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEEECS
T ss_pred CCcCC-CEEEEECCcHHHHHHHHHHHHhc------CCEEEEEEeC
Confidence 46889 999999999999999999988 7 88776 4443
No 494
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=89.76 E-value=0.61 Score=44.86 Aligned_cols=91 Identities=20% Similarity=0.243 Sum_probs=57.2
Q ss_pred cCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHh----hc--CcCC
Q 014834 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYE----TI--SGSD 180 (417)
Q Consensus 109 ~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~E----a~--~~AD 180 (417)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++. ...+.+++.|.... |-...+..+ .. ...|
T Consensus 145 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------G~~Vi~~~~~~-~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 145 PG-DYVLIHAAAGGMGHIMVPWARHL------GATVIGTVSTE-EKAETARKLGCHHTINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TT-CEEEETTTTSTTHHHHHHHHHHT------TCEEEEEESSH-HHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CC-CEEEEECCccHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCe
Confidence 46 89999995 99999999999998 99887776653 34556666664310 111112222 22 2478
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+||-++... .++.....++++-.++..
T Consensus 217 ~vi~~~g~~----~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 217 VVYDSIGKD----TLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp EEEECSCTT----THHHHHHTEEEEEEEEEC
T ss_pred EEEECCcHH----HHHHHHHhhccCCEEEEE
Confidence 999888763 344445556666555443
No 495
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=89.74 E-value=0.92 Score=42.48 Aligned_cols=90 Identities=8% Similarity=0.005 Sum_probs=54.2
Q ss_pred hhhccCCCEEEEEcc-cc--hHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceecCCCcCCHHhhcCcCCE
Q 014834 105 PDAFNGINQIGVIGW-GS--QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 105 ~~~l~gmkkIgIIG~-G~--mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~~~~~~s~~Ea~~~ADI 181 (417)
+..++| |+|-|.|. |. +|.++|+.|.+. |.+|++..|.. ..+..++. .+...+..+
T Consensus 21 M~~l~~-k~vlVTGasg~~GIG~~ia~~l~~~------G~~V~~~~r~~--~~~~~~~l------------~~~~~~~~~ 79 (280)
T 3nrc_A 21 MGFLAG-KKILITGLLSNKSIAYGIAKAMHRE------GAELAFTYVGQ--FKDRVEKL------------CAEFNPAAV 79 (280)
T ss_dssp -CTTTT-CEEEECCCCSTTCHHHHHHHHHHHT------TCEEEEEECTT--CHHHHHHH------------HGGGCCSEE
T ss_pred ccccCC-CEEEEECCCCCCCHHHHHHHHHHHc------CCEEEEeeCch--HHHHHHHH------------HHhcCCceE
Confidence 466888 99999996 56 999999999999 99988877764 11111111 000111222
Q ss_pred EEEccCC-chHHHHHHHHHhcCCCCcEEEEecCch
Q 014834 182 VLLLISD-AAQADNYEKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 182 ViLavpd-~~~~~Vl~eI~~~lk~gaiLi~a~G~~ 215 (417)
+.+=+.+ ....++++++.....+=.+|+..+|+.
T Consensus 80 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 80 LPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp EECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCC
T ss_pred EEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 2222333 344567777766554334678888863
No 496
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=89.68 E-value=0.49 Score=45.59 Aligned_cols=92 Identities=14% Similarity=0.170 Sum_probs=60.0
Q ss_pred cCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHH-HcCceec-CCC-cCCHHhhc-----CcC
Q 014834 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEE-NGT-LGDIYETI-----SGS 179 (417)
Q Consensus 109 ~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~-~~G~~~~-~~~-~~s~~Ea~-----~~A 179 (417)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++. ...+.++ +.|.... |-. ..+..+.+ ...
T Consensus 155 ~g-~~vlI~Ga~g~iG~~~~~~a~~~------G~~V~~~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 155 EG-ETVYVSAASGAVGQLVGQLAKMM------GCYVVGSAGSK-EKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESSH-HHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCC
Confidence 46 89999997 99999999999988 99887766653 3455665 5675310 100 01222222 257
Q ss_pred CEEEEccCCchHHHHHHHHHhcCCCCcEEEEec
Q 014834 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 180 DIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~ 212 (417)
|+||-++.. +.++.....++++-.++..+
T Consensus 227 d~vi~~~g~----~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 227 DIYFENVGG----KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred cEEEECCCH----HHHHHHHHHHhcCCEEEEEc
Confidence 999998864 24556666777766655443
No 497
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=89.55 E-value=1.5 Score=43.43 Aligned_cols=83 Identities=19% Similarity=0.134 Sum_probs=46.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecC-ChhhHHHHHH----cC------------ceecCC------C
Q 014834 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARA----AG------------FTEENG------T 168 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~-~s~s~~~A~~----~G------------~~~~~~------~ 168 (417)
.||||+|+|.+|+.+.+.|.+.. +.+++|+..++. +........+ .| +.. ++ .
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~---~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v-~g~~i~v~~ 78 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQ---NTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITV-NGKTMKIVC 78 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCS---CCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEE-TTEEEEEEC
T ss_pred eEEEEECCCHHHHHHHHHHHhcC---CCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeee-cCceEEEEe
Confidence 58999999999999999987640 114665433332 2221111111 11 100 11 0
Q ss_pred cCCHHhhc---CcCCEEEEccCCchHHHHHHHH
Q 014834 169 LGDIYETI---SGSDLVLLLISDAAQADNYEKI 198 (417)
Q Consensus 169 ~~s~~Ea~---~~ADIViLavpd~~~~~Vl~eI 198 (417)
..+++++- .++|+||.|++-....+.....
T Consensus 79 ~~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~ 111 (339)
T 3b1j_A 79 DRNPLNLPWKEWDIDLVIESTGVFVTAEGASKH 111 (339)
T ss_dssp CSCGGGSCTTTTTCCEEEECSSSCCBHHHHHHH
T ss_pred cCChHHCcccccCCCEEEECCCccccHHHHHHH
Confidence 12444432 2789999999987776666543
No 498
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.41 E-value=0.93 Score=43.79 Aligned_cols=93 Identities=18% Similarity=0.167 Sum_probs=59.0
Q ss_pred ccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCChhhHHHHHHcCceec-CCCcCCHHh----hcC--cCC
Q 014834 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYE----TIS--GSD 180 (417)
Q Consensus 108 l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~s~~~A~~~G~~~~-~~~~~s~~E----a~~--~AD 180 (417)
-.| .+|.|+|.|.+|...++-++.. .|.+|++..++ +...+.+++.|.... +.. .+..+ ... ..|
T Consensus 170 ~~g-~~vlv~GaG~vG~~a~qla~~~-----g~~~Vi~~~~~-~~~~~~~~~lGa~~~i~~~-~~~~~~v~~~t~g~g~d 241 (345)
T 3jv7_A 170 GPG-STAVVIGVGGLGHVGIQILRAV-----SAARVIAVDLD-DDRLALAREVGADAAVKSG-AGAADAIRELTGGQGAT 241 (345)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHH-----CCCEEEEEESC-HHHHHHHHHTTCSEEEECS-TTHHHHHHHHHGGGCEE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc-----CCCEEEEEcCC-HHHHHHHHHcCCCEEEcCC-CcHHHHHHHHhCCCCCe
Confidence 346 8999999999999999888766 03466655554 455788888886431 100 12222 222 689
Q ss_pred EEEEccCCchHHHHHHHHHhcCCCCcEEEEe
Q 014834 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 IViLavpd~~~~~Vl~eI~~~lk~gaiLi~a 211 (417)
+||-++.... .++.....++++-.++..
T Consensus 242 ~v~d~~G~~~---~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 242 AVFDFVGAQS---TIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EEEESSCCHH---HHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCCHH---HHHHHHHHHhcCCEEEEE
Confidence 9999998752 344444556666655544
No 499
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=89.39 E-value=1.5 Score=42.59 Aligned_cols=90 Identities=10% Similarity=0.050 Sum_probs=60.0
Q ss_pred cCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCcEEEEEecCChh---hHHHHHHcCceecCCCcCC--------HHhhc
Q 014834 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR---SFAEARAAGFTEENGTLGD--------IYETI 176 (417)
Q Consensus 109 ~gmkkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s~---s~~~A~~~G~~~~~~~~~s--------~~Ea~ 176 (417)
.| .+|.|+|. |.+|...++-++.. |.++++..+..+. ..+.+++.|... +.+ ..+..
T Consensus 167 ~g-~~VlV~Ga~G~vG~~aiqlak~~------Ga~vi~~~~~~~~~~~~~~~~~~lGa~~----vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 167 PG-DSVIQNASNSGVGQAVIQIAAAL------GLRTINVVRDRPDIQKLSDRLKSLGAEH----VITEEELRRPEMKNFF 235 (357)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEECCCSCHHHHHHHHHHTTCSE----EEEHHHHHSGGGGGTT
T ss_pred CC-CEEEEeCCcCHHHHHHHHHHHHc------CCEEEEEecCccchHHHHHHHHhcCCcE----EEecCcchHHHHHHHH
Confidence 46 89999998 99999999999888 9877666554322 346777888642 112 12222
Q ss_pred C---cCCEEEEccCCchHHHHHHHHHhcCCCCcEEEEecC
Q 014834 177 S---GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 177 ~---~ADIViLavpd~~~~~Vl~eI~~~lk~gaiLi~a~G 213 (417)
. ..|+||-++..... .+....++++-.++..++
T Consensus 236 ~~~~~~Dvvid~~g~~~~----~~~~~~l~~~G~iv~~G~ 271 (357)
T 1zsy_A 236 KDMPQPRLALNCVGGKSS----TELLRQLARGGTMVTYGG 271 (357)
T ss_dssp SSSCCCSEEEESSCHHHH----HHHHTTSCTTCEEEECCC
T ss_pred hCCCCceEEEECCCcHHH----HHHHHhhCCCCEEEEEec
Confidence 2 37999999874333 234567787776665543
No 500
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=89.35 E-value=1.2 Score=45.40 Aligned_cols=83 Identities=24% Similarity=0.161 Sum_probs=53.8
Q ss_pred ccccccchhhccCCCEEEEEcccchHHHHHHHHHhhhhhhcCCcEEEEEecCCh---------------h-----hHHHH
Q 014834 98 RDLFKLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS---------------R-----SFAEA 157 (417)
Q Consensus 98 ~~~f~~~~~~l~gmkkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~ViVg~r~~s---------------~-----s~~~A 157 (417)
.|..+..+..-.+ ++|.|||.|.-|.+.|..|++. |++|++..+.+. + ..+..
T Consensus 110 ~~~~~~~~~~~~~-~~V~IIGgGpAGl~aA~~L~~~------G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l 182 (456)
T 2vdc_G 110 GWVKPRTPSRELG-LSVGVIGAGPAGLAAAEELRAK------GYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLL 182 (456)
T ss_dssp TCCCCCCSCSSCC-CCEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHH
T ss_pred CCCCCCCCcCCCC-CEEEEECCCHHHHHHHHHHHHC------CCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHH
Confidence 3554433233456 8999999999999999999999 999888865421 1 11334
Q ss_pred HHcCceecCCCc----CCHHhhcCcCCEEEEccC
Q 014834 158 RAAGFTEENGTL----GDIYETISGSDLVLLLIS 187 (417)
Q Consensus 158 ~~~G~~~~~~~~----~s~~Ea~~~ADIViLavp 187 (417)
++.|+....++. .+.++.....|.|||++-
T Consensus 183 ~~~gv~~~~~~~v~~~v~~~~~~~~~d~vvlAtG 216 (456)
T 2vdc_G 183 ADAGVIYHPNFEVGRDASLPELRRKHVAVLVATG 216 (456)
T ss_dssp HHTTCEEETTCCBTTTBCHHHHHSSCSEEEECCC
T ss_pred HHCCcEEEeCCEeccEEEhhHhHhhCCEEEEecC
Confidence 556765321111 134455467999999864
Done!