Query 014843
Match_columns 417
No_of_seqs 196 out of 255
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 18:49:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014843.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014843hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oz2_A Digeranylgeranylglycero 99.9 1.8E-24 6.2E-29 210.8 21.4 288 30-353 94-394 (397)
2 3cgv_A Geranylgeranyl reductas 99.9 1E-22 3.4E-27 200.5 23.3 285 31-352 95-393 (397)
3 3atr_A Conserved archaeal prot 99.9 4E-20 1.4E-24 188.5 24.2 287 32-352 94-410 (453)
4 3nix_A Flavoprotein/dehydrogen 99.8 9.3E-18 3.2E-22 167.2 17.5 223 31-265 99-332 (421)
5 3e1t_A Halogenase; flavoprotei 99.7 8.1E-17 2.8E-21 167.2 15.4 270 31-317 104-401 (512)
6 3rp8_A Flavoprotein monooxygen 99.6 1.2E-14 4.1E-19 145.0 22.3 206 32-256 121-336 (407)
7 3i3l_A Alkylhalidase CMLS; fla 99.6 1.5E-16 5E-21 169.6 7.6 226 32-270 122-357 (591)
8 1k0i_A P-hydroxybenzoate hydro 99.6 3.2E-15 1.1E-19 148.1 14.5 263 32-317 97-375 (394)
9 2x3n_A Probable FAD-dependent 99.6 1.8E-15 6.3E-20 150.3 11.0 210 31-262 100-327 (399)
10 2qa2_A CABE, polyketide oxygen 99.6 3.8E-14 1.3E-18 147.4 21.0 221 31-276 100-329 (499)
11 2qa1_A PGAE, polyketide oxygen 99.6 2.3E-14 8E-19 149.0 18.4 218 31-270 99-325 (500)
12 3fmw_A Oxygenase; mithramycin, 99.6 1.7E-14 5.7E-19 152.8 17.0 237 32-291 142-396 (570)
13 2gmh_A Electron transfer flavo 99.6 1E-13 3.5E-18 147.0 20.8 242 33-283 139-410 (584)
14 3ihg_A RDME; flavoenzyme, anth 99.5 1.7E-12 5.7E-17 135.0 20.5 220 32-269 114-348 (535)
15 2weu_A Tryptophan 5-halogenase 99.5 6.3E-13 2.1E-17 137.0 16.9 207 32-269 167-382 (511)
16 3alj_A 2-methyl-3-hydroxypyrid 99.4 5.3E-13 1.8E-17 132.1 11.7 202 33-255 102-315 (379)
17 2dkh_A 3-hydroxybenzoate hydro 99.4 8.5E-12 2.9E-16 133.4 20.1 238 33-292 136-417 (639)
18 2e4g_A Tryptophan halogenase; 99.4 3.5E-12 1.2E-16 133.7 16.7 212 32-277 188-410 (550)
19 2aqj_A Tryptophan halogenase, 99.4 4.2E-12 1.5E-16 132.3 14.0 207 32-270 159-375 (538)
20 2pyx_A Tryptophan halogenase; 99.3 1.8E-12 6.1E-17 134.9 9.9 200 32-254 169-378 (526)
21 1pn0_A Phenol 2-monooxygenase; 99.3 1.8E-11 6.1E-16 131.9 17.7 240 33-294 114-428 (665)
22 3c96_A Flavin-containing monoo 99.3 2.1E-11 7.3E-16 122.0 15.2 208 33-257 102-339 (410)
23 2r0c_A REBC; flavin adenine di 99.3 1.8E-10 6.3E-15 120.8 19.8 205 33-261 133-349 (549)
24 2xdo_A TETX2 protein; tetracyc 99.2 6.2E-11 2.1E-15 118.2 12.3 203 34-257 124-350 (398)
25 4hb9_A Similarities with proba 99.2 4.5E-10 1.5E-14 110.0 17.2 223 34-277 108-364 (412)
26 2vou_A 2,6-dihydroxypyridine h 99.2 1.5E-10 5E-15 115.4 13.1 67 35-104 96-162 (397)
27 3c4a_A Probable tryptophan hyd 98.9 1.9E-09 6.4E-14 107.0 9.4 194 33-258 93-299 (381)
28 1ryi_A Glycine oxidase; flavop 98.6 6.6E-07 2.3E-11 87.4 14.8 194 34-265 160-365 (382)
29 1yvv_A Amine oxidase, flavin-c 98.4 1.1E-05 3.7E-10 77.1 17.8 188 52-261 119-329 (336)
30 2gag_B Heterotetrameric sarcos 98.4 1.4E-05 4.8E-10 78.4 18.1 195 34-262 170-375 (405)
31 3ihm_A Styrene monooxygenase A 98.3 7.2E-07 2.5E-11 90.4 7.1 201 32-258 116-345 (430)
32 2gf3_A MSOX, monomeric sarcosi 98.2 1.5E-05 5E-10 77.8 14.2 200 34-263 146-365 (389)
33 2qcu_A Aerobic glycerol-3-phos 98.2 3.2E-05 1.1E-09 79.9 17.1 203 35-261 146-371 (501)
34 2oln_A NIKD protein; flavoprot 98.2 8.7E-05 3E-09 73.1 19.3 68 34-102 149-217 (397)
35 1y56_B Sarcosine oxidase; dehy 98.2 4.7E-05 1.6E-09 74.3 17.1 66 35-101 146-213 (382)
36 3nyc_A D-arginine dehydrogenas 98.1 1.8E-05 6.2E-10 76.6 12.6 199 34-265 150-361 (381)
37 3dme_A Conserved exported prot 98.1 8.7E-05 3E-09 71.2 16.8 67 34-100 146-216 (369)
38 3pvc_A TRNA 5-methylaminomethy 97.7 0.00032 1.1E-08 75.3 14.3 63 34-96 408-471 (689)
39 3ps9_A TRNA 5-methylaminomethy 97.7 0.00075 2.6E-08 72.1 16.6 63 34-96 413-475 (676)
40 3da1_A Glycerol-3-phosphate de 97.6 0.0021 7.3E-08 67.5 18.0 186 34-236 166-370 (561)
41 2rgh_A Alpha-glycerophosphate 97.6 0.0021 7E-08 67.8 17.3 65 35-99 185-255 (571)
42 3dje_A Fructosyl amine: oxygen 97.3 0.00039 1.3E-08 69.4 8.1 64 34-97 157-224 (438)
43 2uzz_A N-methyl-L-tryptophan o 97.2 0.00055 1.9E-08 66.3 7.6 61 34-95 145-205 (372)
44 3c4n_A Uncharacterized protein 97.2 0.00033 1.1E-08 69.9 6.0 68 34-102 168-246 (405)
45 3v76_A Flavoprotein; structura 97.2 0.00077 2.6E-08 68.5 8.8 59 35-94 129-187 (417)
46 2ywl_A Thioredoxin reductase r 97.2 0.00093 3.2E-08 58.5 8.3 64 35-100 53-116 (180)
47 2i0z_A NAD(FAD)-utilizing dehy 97.2 0.00075 2.6E-08 68.5 8.6 68 36-103 132-211 (447)
48 4dgk_A Phytoene dehydrogenase; 97.1 0.014 4.7E-07 59.1 17.1 56 38-93 221-277 (501)
49 2cul_A Glucose-inhibited divis 96.9 0.002 6.8E-08 59.5 7.7 62 36-98 66-129 (232)
50 2gqf_A Hypothetical protein HI 96.8 0.0027 9.1E-08 64.0 8.1 58 36-94 107-168 (401)
51 3axb_A Putative oxidoreductase 96.7 0.0036 1.2E-07 62.6 8.5 67 34-101 177-262 (448)
52 2vvm_A Monoamine oxidase N; FA 96.6 0.045 1.5E-06 55.4 16.1 57 37-93 254-311 (495)
53 3nrn_A Uncharacterized protein 96.5 0.046 1.6E-06 54.1 14.9 54 38-93 189-242 (421)
54 3nlc_A Uncharacterized protein 96.5 0.0049 1.7E-07 65.2 7.8 61 35-95 217-278 (549)
55 4a9w_A Monooxygenase; baeyer-v 96.3 0.011 3.7E-07 56.1 8.6 59 35-94 73-132 (357)
56 3jsk_A Cypbp37 protein; octame 96.2 0.0094 3.2E-07 59.6 7.7 65 36-100 158-257 (344)
57 1rp0_A ARA6, thiazole biosynth 96.2 0.02 6.9E-07 54.3 9.8 65 36-100 117-197 (284)
58 3ab1_A Ferredoxin--NADP reduct 96.2 0.012 4.2E-07 56.8 8.2 64 35-98 71-135 (360)
59 2zbw_A Thioredoxin reductase; 96.1 0.014 4.8E-07 55.4 8.4 64 35-98 62-125 (335)
60 2q0l_A TRXR, thioredoxin reduc 96.1 0.015 5.2E-07 54.6 8.4 62 34-96 55-116 (311)
61 2gjc_A Thiazole biosynthetic e 96.0 0.016 5.4E-07 57.5 8.5 67 36-102 144-247 (326)
62 3i6d_A Protoporphyrinogen oxid 96.0 0.12 4.1E-06 51.2 14.8 53 39-93 236-288 (470)
63 3qj4_A Renalase; FAD/NAD(P)-bi 96.0 0.24 8.3E-06 47.4 16.6 42 50-91 121-162 (342)
64 2bry_A NEDD9 interacting prote 95.9 0.0041 1.4E-07 64.3 3.7 66 35-100 163-236 (497)
65 1pj5_A N,N-dimethylglycine oxi 95.8 0.012 4.2E-07 64.3 7.3 63 34-97 147-210 (830)
66 3g3e_A D-amino-acid oxidase; F 95.7 0.028 9.6E-07 54.1 8.7 194 33-265 137-340 (351)
67 1qo8_A Flavocytochrome C3 fuma 95.6 0.028 9.7E-07 58.7 8.5 62 35-96 247-314 (566)
68 3k7m_X 6-hydroxy-L-nicotine ox 95.5 1.4 4.8E-05 43.2 20.2 48 44-92 209-257 (431)
69 3cp8_A TRNA uridine 5-carboxym 95.3 0.048 1.6E-06 58.8 9.5 62 33-95 112-175 (641)
70 2gv8_A Monooxygenase; FMO, FAD 95.3 0.033 1.1E-06 56.1 7.7 60 35-94 112-177 (447)
71 1vdc_A NTR, NADPH dependent th 95.2 0.019 6.5E-07 54.5 5.4 61 35-97 67-127 (333)
72 3gwf_A Cyclohexanone monooxyge 95.2 0.041 1.4E-06 57.6 8.4 60 35-94 84-147 (540)
73 1c0p_A D-amino acid oxidase; a 95.2 0.046 1.6E-06 52.9 8.0 50 34-96 138-187 (363)
74 3lov_A Protoporphyrinogen oxid 95.1 0.31 1E-05 48.8 14.3 51 40-93 238-288 (475)
75 3fbs_A Oxidoreductase; structu 95.1 0.11 3.7E-06 47.9 9.9 63 34-96 52-114 (297)
76 1fl2_A Alkyl hydroperoxide red 95.0 0.059 2E-06 50.5 8.1 61 35-95 53-116 (310)
77 3ces_A MNMG, tRNA uridine 5-ca 94.9 0.048 1.6E-06 58.9 8.1 61 34-95 120-182 (651)
78 1w4x_A Phenylacetone monooxyge 94.9 0.064 2.2E-06 55.7 8.8 61 34-94 90-154 (542)
79 3d1c_A Flavin-containing putat 94.9 0.067 2.3E-06 51.3 8.3 59 35-94 85-143 (369)
80 1y0p_A Fumarate reductase flav 94.9 0.046 1.6E-06 57.1 7.6 60 36-95 253-318 (571)
81 4ap3_A Steroid monooxygenase; 94.7 0.067 2.3E-06 56.1 8.3 60 34-93 95-158 (549)
82 3cty_A Thioredoxin reductase; 94.7 0.088 3E-06 49.7 8.3 60 34-95 68-127 (319)
83 2zxi_A TRNA uridine 5-carboxym 94.7 0.05 1.7E-06 58.6 7.3 62 33-95 118-181 (637)
84 1s3e_A Amine oxidase [flavin-c 94.7 1.5 5.3E-05 44.5 18.2 43 51-93 225-267 (520)
85 3f8d_A Thioredoxin reductase ( 94.5 0.13 4.3E-06 47.9 8.9 59 35-94 67-125 (323)
86 2q7v_A Thioredoxin reductase; 94.4 0.074 2.5E-06 50.4 7.1 60 35-95 62-124 (325)
87 3p1w_A Rabgdi protein; GDI RAB 94.2 0.28 9.6E-06 50.9 11.6 58 37-94 255-314 (475)
88 1d4d_A Flavocytochrome C fumar 94.0 0.095 3.3E-06 55.0 7.7 60 37-96 254-319 (572)
89 3lzw_A Ferredoxin--NADP reduct 94.0 0.12 4E-06 48.5 7.6 59 35-94 64-123 (332)
90 1hyu_A AHPF, alkyl hydroperoxi 94.0 0.15 5.1E-06 52.8 9.0 61 35-95 264-327 (521)
91 2xve_A Flavin-containing monoo 93.8 0.12 4E-06 52.7 7.6 60 34-93 97-165 (464)
92 3kkj_A Amine oxidase, flavin-c 93.7 0.047 1.6E-06 47.0 4.0 39 219-263 293-331 (336)
93 3ka7_A Oxidoreductase; structu 93.7 0.15 5.1E-06 50.1 8.0 55 38-93 196-251 (425)
94 2a87_A TRXR, TR, thioredoxin r 93.7 0.1 3.5E-06 49.8 6.7 60 35-96 68-128 (335)
95 4at0_A 3-ketosteroid-delta4-5a 93.6 0.18 6E-06 51.9 8.7 56 39-94 203-264 (510)
96 3uox_A Otemo; baeyer-villiger 93.5 0.14 4.7E-06 53.7 7.8 59 35-93 84-146 (545)
97 2v3a_A Rubredoxin reductase; a 93.4 0.18 6.3E-06 49.4 8.0 61 36-96 185-245 (384)
98 1kf6_A Fumarate reductase flav 93.3 0.16 5.5E-06 53.8 8.0 61 38-98 134-201 (602)
99 1trb_A Thioredoxin reductase; 92.8 0.17 5.7E-06 47.5 6.6 60 35-96 59-118 (320)
100 2h88_A Succinate dehydrogenase 92.3 0.44 1.5E-05 50.8 9.6 59 38-96 155-219 (621)
101 3s5w_A L-ornithine 5-monooxyge 92.1 0.22 7.5E-06 49.8 6.7 61 35-95 124-193 (463)
102 2wdq_A Succinate dehydrogenase 91.8 0.54 1.8E-05 49.6 9.5 59 38-96 143-208 (588)
103 3itj_A Thioredoxin reductase 1 91.7 0.26 9.1E-06 46.1 6.4 61 34-95 80-143 (338)
104 1b37_A Protein (polyamine oxid 91.3 0.21 7.1E-06 50.4 5.4 54 39-92 207-268 (472)
105 2yqu_A 2-oxoglutarate dehydrog 91.3 0.59 2E-05 46.9 8.8 59 38-96 208-266 (455)
106 2bs2_A Quinol-fumarate reducta 90.3 0.66 2.3E-05 49.9 8.6 60 37-96 157-222 (660)
107 1d5t_A Guanine nucleotide diss 89.9 0.29 1E-05 49.2 5.1 62 37-98 233-294 (433)
108 1chu_A Protein (L-aspartate ox 89.8 0.28 9.5E-06 51.2 5.0 61 37-97 137-211 (540)
109 3o0h_A Glutathione reductase; 89.6 0.53 1.8E-05 47.8 6.8 58 39-96 233-290 (484)
110 1xdi_A RV3303C-LPDA; reductase 89.5 0.78 2.7E-05 46.8 8.0 58 39-96 224-281 (499)
111 2e5v_A L-aspartate oxidase; ar 88.7 0.42 1.4E-05 48.8 5.3 62 36-98 117-180 (472)
112 3nks_A Protoporphyrinogen oxid 88.6 0.55 1.9E-05 46.8 6.0 53 39-92 235-288 (477)
113 3fpz_A Thiazole biosynthetic e 88.5 0.12 4.2E-06 49.5 1.1 44 218-261 281-326 (326)
114 2bcg_G Secretory pathway GDP d 88.1 0.68 2.3E-05 46.7 6.4 57 38-95 242-301 (453)
115 3iwa_A FAD-dependent pyridine 87.3 1.5 5.2E-05 44.1 8.4 63 38-100 202-266 (472)
116 2r9z_A Glutathione amide reduc 87.1 1.4 4.8E-05 44.5 8.0 61 35-96 205-266 (463)
117 1ges_A Glutathione reductase; 87.0 1 3.4E-05 45.4 6.8 61 35-96 206-267 (450)
118 1mo9_A ORF3; nucleotide bindin 86.8 0.86 2.9E-05 46.9 6.3 59 38-96 255-318 (523)
119 1m6i_A Programmed cell death p 86.7 1.4 4.7E-05 45.1 7.8 63 38-100 226-290 (493)
120 3fg2_P Putative rubredoxin red 86.7 1.4 4.7E-05 43.5 7.5 59 37-95 183-242 (404)
121 3lxd_A FAD-dependent pyridine 86.6 1.3 4.5E-05 43.7 7.4 59 37-95 193-252 (415)
122 2a8x_A Dihydrolipoyl dehydroge 85.2 1.1 3.6E-05 45.2 5.9 54 40-96 93-148 (464)
123 1jnr_A Adenylylsulfate reducta 85.2 0.94 3.2E-05 48.2 5.8 62 35-96 148-220 (643)
124 2yg5_A Putrescine oxidase; oxi 84.6 1.9 6.4E-05 42.7 7.4 43 50-93 224-267 (453)
125 2eq6_A Pyruvate dehydrogenase 83.9 2.5 8.4E-05 42.7 8.0 59 38-96 210-273 (464)
126 3oc4_A Oxidoreductase, pyridin 83.9 2.6 8.8E-05 42.2 8.1 58 38-96 189-246 (452)
127 1fec_A Trypanothione reductase 83.8 2.7 9.2E-05 42.8 8.3 58 39-96 232-290 (490)
128 4fk1_A Putative thioredoxin re 83.8 3 0.0001 39.0 8.1 60 35-94 57-117 (304)
129 1dxl_A Dihydrolipoamide dehydr 83.0 1.5 5E-05 44.1 5.8 55 40-97 98-154 (470)
130 4b63_A L-ornithine N5 monooxyg 82.5 2.3 7.8E-05 43.7 7.1 62 35-96 142-216 (501)
131 4dna_A Probable glutathione re 81.3 2.4 8.3E-05 42.6 6.7 57 39-96 212-270 (463)
132 2ivd_A PPO, PPOX, protoporphyr 81.1 1.1 3.9E-05 44.6 4.2 52 39-93 239-293 (478)
133 2jae_A L-amino acid oxidase; o 80.3 2.8 9.6E-05 42.0 6.8 52 39-92 240-294 (489)
134 2hqm_A GR, grase, glutathione 80.2 2.7 9.3E-05 42.5 6.7 58 39-96 227-287 (479)
135 1v59_A Dihydrolipoamide dehydr 80.1 2.3 8E-05 42.7 6.1 49 44-95 102-158 (478)
136 3ef6_A Toluene 1,2-dioxygenase 79.7 1.9 6.5E-05 42.7 5.3 58 38-95 185-242 (410)
137 1ebd_A E3BD, dihydrolipoamide 79.7 3.2 0.00011 41.5 7.0 59 38-96 211-272 (455)
138 2wpf_A Trypanothione reductase 79.5 3.3 0.00011 42.2 7.1 61 35-96 233-294 (495)
139 1zk7_A HGII, reductase, mercur 78.8 4.5 0.00015 40.5 7.8 58 38-96 216-273 (467)
140 1zmd_A Dihydrolipoyl dehydroge 78.8 5.1 0.00018 40.2 8.2 59 38-96 220-284 (474)
141 1q1r_A Putidaredoxin reductase 78.8 2.9 0.0001 41.7 6.4 58 38-95 191-251 (431)
142 1onf_A GR, grase, glutathione 78.4 4.7 0.00016 41.1 7.8 61 35-96 215-277 (500)
143 2cdu_A NADPH oxidase; flavoenz 77.6 5.2 0.00018 39.9 7.8 57 39-96 192-249 (452)
144 2qae_A Lipoamide, dihydrolipoy 77.3 4.2 0.00015 40.7 7.0 58 39-96 216-278 (468)
145 1vg0_A RAB proteins geranylger 77.0 4.6 0.00016 43.5 7.6 58 37-94 377-437 (650)
146 3gyx_A Adenylylsulfate reducta 76.8 2.5 8.6E-05 45.4 5.4 62 35-96 163-235 (662)
147 1ebd_A E3BD, dihydrolipoamide 76.7 3.6 0.00012 41.2 6.3 54 40-96 93-147 (455)
148 1ojt_A Surface protein; redox- 75.7 3.9 0.00013 41.3 6.3 50 44-96 101-162 (482)
149 4gut_A Lysine-specific histone 75.2 2.9 9.9E-05 45.8 5.5 42 50-91 541-582 (776)
150 1rsg_A FMS1 protein; FAD bindi 75.1 3.3 0.00011 42.1 5.6 40 53-92 215-255 (516)
151 1ojt_A Surface protein; redox- 74.5 4.8 0.00016 40.7 6.6 58 39-96 227-288 (482)
152 3urh_A Dihydrolipoyl dehydroge 74.3 9.8 0.00034 38.4 8.9 58 39-96 240-302 (491)
153 3ntd_A FAD-dependent pyridine 74.2 5.8 0.0002 40.6 7.2 58 38-95 192-268 (565)
154 2b9w_A Putative aminooxidase; 73.5 3.8 0.00013 40.0 5.4 45 48-93 213-257 (424)
155 3r9u_A Thioredoxin reductase; 72.5 7.4 0.00025 35.7 6.9 58 34-94 58-118 (315)
156 2gqw_A Ferredoxin reductase; f 72.2 5.9 0.0002 39.1 6.5 54 38-95 187-240 (408)
157 1v59_A Dihydrolipoamide dehydr 72.2 5.4 0.00019 40.0 6.3 58 39-96 225-289 (478)
158 2a8x_A Dihydrolipoyl dehydroge 71.3 7 0.00024 39.1 6.9 58 39-96 213-273 (464)
159 3lad_A Dihydrolipoamide dehydr 71.0 9.7 0.00033 38.1 7.8 58 39-96 222-282 (476)
160 1nhp_A NADH peroxidase; oxidor 70.8 4.2 0.00014 40.5 5.1 56 38-95 191-247 (447)
161 1trb_A Thioredoxin reductase; 69.7 8.6 0.00029 35.6 6.7 56 38-93 184-246 (320)
162 3d1c_A Flavin-containing putat 69.3 10 0.00034 35.9 7.2 55 39-93 215-271 (369)
163 1dxl_A Dihydrolipoamide dehydr 69.2 5.8 0.0002 39.6 5.7 59 38-96 218-281 (470)
164 1zmd_A Dihydrolipoyl dehydroge 68.9 10 0.00035 37.9 7.6 49 44-95 103-153 (474)
165 4a5l_A Thioredoxin reductase; 66.7 11 0.00038 34.6 6.8 59 35-94 63-121 (314)
166 3cgb_A Pyridine nucleotide-dis 64.4 11 0.00037 38.0 6.7 57 38-95 227-283 (480)
167 3cgb_A Pyridine nucleotide-dis 63.8 3.2 0.00011 42.0 2.6 58 37-94 91-152 (480)
168 2z3y_A Lysine-specific histone 63.8 8.8 0.0003 40.8 6.1 44 48-91 406-455 (662)
169 3s5w_A L-ornithine 5-monooxyge 63.6 19 0.00064 35.6 8.1 43 51-93 329-376 (463)
170 2iid_A L-amino-acid oxidase; f 63.5 10 0.00036 37.8 6.3 40 54-93 254-297 (498)
171 2qae_A Lipoamide, dihydrolipoy 61.7 14 0.00049 36.8 6.9 48 44-94 99-148 (468)
172 3ab1_A Ferredoxin--NADP reduct 61.2 15 0.00051 34.8 6.7 55 39-93 203-262 (360)
173 3klj_A NAD(FAD)-dependent dehy 60.4 3.4 0.00012 40.8 2.0 55 37-93 61-115 (385)
174 1q1r_A Putidaredoxin reductase 59.8 6.7 0.00023 39.0 4.1 48 46-95 68-115 (431)
175 4b1b_A TRXR, thioredoxin reduc 59.1 26 0.00088 36.5 8.5 63 31-94 257-319 (542)
176 4gde_A UDP-galactopyranose mut 59.0 7.1 0.00024 38.9 4.1 52 38-91 222-273 (513)
177 3dk9_A Grase, GR, glutathione 58.3 25 0.00084 35.2 8.0 58 39-96 229-295 (478)
178 3itj_A Thioredoxin reductase 1 58.2 11 0.00037 34.9 5.0 52 42-93 212-270 (338)
179 3dgh_A TRXR-1, thioredoxin red 57.8 20 0.00067 36.0 7.2 57 39-95 228-290 (483)
180 1lvl_A Dihydrolipoamide dehydr 55.5 8.4 0.00029 38.6 4.0 56 39-96 213-270 (458)
181 2cdu_A NADPH oxidase; flavoenz 55.1 4.5 0.00015 40.4 1.8 59 36-94 56-117 (452)
182 1y56_A Hypothetical protein PH 53.9 8.8 0.0003 39.0 3.9 55 46-100 265-321 (493)
183 2yqu_A 2-oxoglutarate dehydrog 53.8 12 0.00041 37.2 4.8 47 44-94 95-141 (455)
184 2zbw_A Thioredoxin reductase; 52.6 29 0.00098 32.2 7.0 56 38-93 191-251 (335)
185 3sx6_A Sulfide-quinone reducta 52.4 6.8 0.00023 38.9 2.7 59 35-96 56-114 (437)
186 2bc0_A NADH oxidase; flavoprot 52.2 3.8 0.00013 41.6 0.8 50 45-94 99-149 (490)
187 2bc0_A NADH oxidase; flavoprot 52.0 16 0.00054 37.0 5.3 56 39-96 237-293 (490)
188 1nhp_A NADH peroxidase; oxidor 51.7 6.4 0.00022 39.2 2.4 51 44-94 62-115 (447)
189 3ic9_A Dihydrolipoamide dehydr 51.0 33 0.0011 34.7 7.5 57 39-96 216-276 (492)
190 2xag_A Lysine-specific histone 50.3 17 0.00059 40.2 5.6 42 50-91 579-626 (852)
191 3f8d_A Thioredoxin reductase ( 49.6 26 0.00088 32.0 6.0 50 44-93 195-250 (323)
192 3ics_A Coenzyme A-disulfide re 49.5 17 0.0006 37.4 5.3 56 38-95 228-283 (588)
193 3vrd_B FCCB subunit, flavocyto 49.4 5 0.00017 39.0 1.1 47 47-93 211-257 (401)
194 3r9u_A Thioredoxin reductase; 48.0 20 0.00068 32.7 5.0 45 49-93 194-243 (315)
195 3fbs_A Oxidoreductase; structu 47.6 27 0.00091 31.5 5.7 50 207-263 246-295 (297)
196 3h8l_A NADH oxidase; membrane 47.6 14 0.00048 36.0 4.1 52 38-93 218-269 (409)
197 3k30_A Histamine dehydrogenase 47.0 18 0.00061 38.5 5.0 55 38-94 567-624 (690)
198 4g6h_A Rotenone-insensitive NA 46.9 17 0.00057 37.3 4.6 60 31-93 266-331 (502)
199 1n4w_A CHOD, cholesterol oxida 45.4 34 0.0012 34.8 6.7 50 46-95 229-290 (504)
200 3cty_A Thioredoxin reductase; 43.1 30 0.001 32.0 5.4 52 42-93 194-251 (319)
201 1coy_A Cholesterol oxidase; ox 42.3 44 0.0015 34.0 6.9 51 46-96 234-296 (507)
202 2hqm_A GR, grase, glutathione 42.2 32 0.0011 34.5 5.8 50 42-94 109-160 (479)
203 2bry_A NEDD9 interacting prote 41.7 19 0.00066 36.6 4.1 51 218-269 390-441 (497)
204 3lzw_A Ferredoxin--NADP reduct 41.4 22 0.00075 32.7 4.1 49 45-93 196-249 (332)
205 1xhc_A NADH oxidase /nitrite r 40.1 24 0.00081 34.2 4.3 54 38-96 183-236 (367)
206 3oc4_A Oxidoreductase, pyridin 40.0 25 0.00087 34.9 4.6 51 44-94 64-115 (452)
207 1sez_A Protoporphyrinogen oxid 39.8 35 0.0012 34.0 5.6 43 50-92 252-306 (504)
208 1xdi_A RV3303C-LPDA; reductase 39.7 27 0.00093 35.2 4.8 53 41-94 98-156 (499)
209 3l8k_A Dihydrolipoyl dehydroge 37.6 57 0.0019 32.5 6.8 50 42-94 93-144 (466)
210 3dgz_A Thioredoxin reductase 2 36.5 70 0.0024 32.0 7.3 61 35-96 223-289 (488)
211 2eq6_A Pyruvate dehydrogenase 36.5 53 0.0018 32.7 6.4 45 45-95 100-144 (464)
212 2q0l_A TRXR, thioredoxin reduc 36.5 63 0.0021 29.5 6.4 50 44-93 184-240 (311)
213 3hyw_A Sulfide-quinone reducta 36.5 44 0.0015 33.0 5.7 54 38-93 200-255 (430)
214 3kd9_A Coenzyme A disulfide re 35.6 27 0.00092 34.6 4.0 57 36-94 56-114 (449)
215 3h8l_A NADH oxidase; membrane 35.3 37 0.0013 32.9 4.9 59 36-95 54-114 (409)
216 1xhc_A NADH oxidase /nitrite r 35.2 13 0.00043 36.2 1.4 57 35-94 57-113 (367)
217 2gqw_A Ferredoxin reductase; f 34.7 21 0.00071 35.1 2.9 46 47-94 68-113 (408)
218 1kdg_A CDH, cellobiose dehydro 34.1 81 0.0028 32.1 7.4 52 44-95 201-263 (546)
219 2jbv_A Choline oxidase; alcoho 33.5 29 0.00099 35.9 3.9 51 46-96 216-276 (546)
220 2q7v_A Thioredoxin reductase; 31.8 78 0.0027 29.2 6.3 45 220-268 276-320 (325)
221 1ps9_A 2,4-dienoyl-COA reducta 31.7 53 0.0018 34.6 5.7 51 42-95 577-629 (671)
222 3lxd_A FAD-dependent pyridine 30.5 26 0.0009 34.2 2.9 48 44-93 71-118 (415)
223 3urh_A Dihydrolipoyl dehydroge 30.4 61 0.0021 32.4 5.6 48 44-94 121-170 (491)
224 3l8k_A Dihydrolipoyl dehydroge 30.0 65 0.0022 32.1 5.7 45 53-97 226-275 (466)
225 3ayj_A Pro-enzyme of L-phenyla 29.8 34 0.0012 37.3 3.8 52 38-90 347-410 (721)
226 2ywl_A Thioredoxin reductase r 28.8 74 0.0025 26.7 5.2 50 206-261 123-172 (180)
227 3h28_A Sulfide-quinone reducta 28.6 11 0.00037 37.3 -0.4 49 44-95 62-110 (430)
228 3h28_A Sulfide-quinone reducta 28.0 69 0.0024 31.4 5.5 52 40-93 202-255 (430)
229 1m6i_A Programmed cell death p 27.9 38 0.0013 34.3 3.6 43 50-94 102-144 (493)
230 1y56_A Hypothetical protein PH 27.7 38 0.0013 34.3 3.5 58 36-94 159-219 (493)
231 1fl2_A Alkyl hydroperoxide red 26.7 1.1E+02 0.0037 27.8 6.3 50 42-91 183-239 (310)
232 3qvp_A Glucose oxidase; oxidor 26.3 72 0.0025 33.5 5.5 62 39-100 228-300 (583)
233 3qfa_A Thioredoxin reductase 1 26.2 1.5E+02 0.0051 30.1 7.7 56 38-96 130-187 (519)
234 3iwa_A FAD-dependent pyridine 25.9 59 0.002 32.3 4.5 44 50-93 78-124 (472)
235 1gpe_A Protein (glucose oxidas 24.8 68 0.0023 33.4 4.9 56 42-97 235-301 (587)
236 3ef6_A Toluene 1,2-dioxygenase 24.5 54 0.0018 32.1 3.9 44 48-93 67-110 (410)
237 1ju2_A HydroxynitrIle lyase; f 24.0 61 0.0021 33.3 4.4 51 46-96 202-264 (536)
238 3ics_A Coenzyme A-disulfide re 23.8 86 0.0029 32.2 5.4 52 42-93 97-151 (588)
239 3dgh_A TRXR-1, thioredoxin red 23.3 1.9E+02 0.0066 28.7 7.8 44 48-94 118-162 (483)
240 1vdc_A NTR, NADPH dependent th 23.1 1.1E+02 0.0038 28.1 5.6 51 43-93 199-258 (333)
241 3ntd_A FAD-dependent pyridine 22.5 36 0.0012 34.6 2.3 47 47-93 67-116 (565)
242 2cul_A Glucose-inhibited divis 21.5 65 0.0022 28.7 3.5 36 218-259 196-231 (232)
243 4gcm_A TRXR, thioredoxin reduc 21.4 1.7E+02 0.0058 26.7 6.5 59 34-94 58-116 (312)
244 3dgz_A Thioredoxin reductase 2 20.7 1.5E+02 0.0051 29.6 6.4 45 47-94 113-159 (488)
No 1
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.93 E-value=1.8e-24 Score=210.76 Aligned_cols=288 Identities=13% Similarity=0.158 Sum_probs=195.5
Q ss_pred ceeeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEe--cCC--cEEEEEEEEeccCCCchhhhhhhcCC-
Q 014843 30 SILEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEG--KILSSHLIIDAMGNFSPVVKQIRSGR- 104 (417)
Q Consensus 30 ~~~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t--~~g--~~~~ARlVIDA~G~~Spiarql~~g~- 104 (417)
.....++|..|+++|.++|.+.|++++.+++|+++..+++.++... .++ .+++|++||+|||.+|.++++++...
T Consensus 94 ~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~g~~~~ 173 (397)
T 3oz2_A 94 EVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSV 173 (397)
T ss_dssp CCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCGGG
T ss_pred ceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccccHHHHHcCCCcc
Confidence 3456799999999999999999999999999999999998776432 233 37999999999999999999986542
Q ss_pred --CCCceeeeeeeeeecCC-CCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCCCCCCHHHHHH
Q 014843 105 --KPDGVCLVVGSCARGFK-DNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEELLE 181 (417)
Q Consensus 105 --~~~~vc~~vg~~a~G~~-d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~~~psL~~l~e 181 (417)
+....+..+.......+ +.+..+ +..+.+.+ .+|+| .||.+++ ..+++++...+....+.++++.++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~g~~~-~~~~~~~--~~~vg~~~~~~~~~~~~~~~~~l~ 243 (397)
T 3oz2_A 174 ILARNDIISALQYRMINVDVDPDYTD--FYLGSIAP-----AGYIW-VFPKGEG--MANVGIGSSINWIHNRFELKNYLD 243 (397)
T ss_dssp CCCGGGEEEEEEEEEESCCCCTTEEE--EECSTTST-----TEEEE-EEEEETT--EEEEEEEEETTTSCSHHHHHHHHH
T ss_pred cccceeeeeeEEEEeeccccCcccce--eeeeccCC-----CceEE-Eeecccc--eeEEEEeeccchhhhhhhHHHHHH
Confidence 22223322222222222 223333 33444443 68999 8999865 367777754432222226888888
Q ss_pred HHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhC
Q 014843 182 RYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 261 (417)
Q Consensus 182 ~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~ 261 (417)
++++..|..+. .+..+...+.+|..+ ...+...+|++++||||+.++|++|.|+..+++++..+|+.|.+|+++
T Consensus 244 ~~~~~~~~l~~-----~~~~~~~~~~~~~~~-~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~ 317 (397)
T 3oz2_A 244 RFIENHPGLKK-----GQDIQLVTGGVSVSK-VKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIES 317 (397)
T ss_dssp HHHHTCHHHHT-----SEEEEEEEEEEECCC-CCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCccccc-----cceeeeeeccccccC-cccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHc
Confidence 88887765443 233455557888865 355788899999999999999999999999999988899999999999
Q ss_pred CCCChhhHhhhc-----CCCccchHHHHHHhhcccccCCCCChhHHHHHHHHHHHHHhhcChhhhcccccccCChhHHHH
Q 014843 262 DFVDSYSLSLLN-----PYMPNLSASWLFQRAMSAKQQSDVSPDFINELLYVNFQCMQKLGDPVLRPFLQDVIKFGPLAK 336 (417)
Q Consensus 262 ~~lsa~~L~~l~-----~Yq~nl~~~~~lqk~M~~~~~~~~~p~~in~ll~~~F~~~~~Lp~~~~~~fl~d~~~~~~l~~ 336 (417)
++.+++.|+.+. .|......+|.+++.+.. .+++ .++.+|..+.+. .+ ..+++..+.+
T Consensus 318 ~~~~~~~L~~Ye~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~-------~~-~~~~~~~~~k 380 (397)
T 3oz2_A 318 NDYSPQMMQKYEKLIKERFERKHLRNWVAKEKLAM-----LSDD----TLDKLVDIVSEQ-------VL-TTISVEAILK 380 (397)
T ss_dssp TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCHH----HHHHHHHHHTTS-------CB-CSCSHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCHH----HHHHHHHHHhHH-------Hh-hhcCHHHHHH
Confidence 999998885321 122223334444333321 2333 444455444321 12 2356666655
Q ss_pred HHHHHHHhCCCChHHHH
Q 014843 337 TLGLVMLNKPQIIPSIF 353 (417)
Q Consensus 337 ~m~~~~~~~P~~v~~~~ 353 (417)
+++.++|.+++..-
T Consensus 381 ---~~~~~~p~~~~~l~ 394 (397)
T 3oz2_A 381 ---AIAEKYPEVVKELE 394 (397)
T ss_dssp ---HHHHHCGGGGGGGG
T ss_pred ---HHHHHCHHHHHHHH
Confidence 45789999887653
No 2
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.91 E-value=1e-22 Score=200.47 Aligned_cols=285 Identities=13% Similarity=0.152 Sum_probs=193.9
Q ss_pred eeeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEE-EEec---CCcEEEEEEEEeccCCCchhhhhhhcCC-C
Q 014843 31 ILEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA---EGKILSSHLIIDAMGNFSPVVKQIRSGR-K 105 (417)
Q Consensus 31 ~~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~-V~t~---~g~~~~ARlVIDA~G~~Spiarql~~g~-~ 105 (417)
....++|..|++.|.+++.+.|++++.+++|++++.++++++ |++. ++.+++|++||+|+|..|.+.++++... +
T Consensus 95 ~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~g~~~~~ 174 (397)
T 3cgv_A 95 VGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWAGLKSVI 174 (397)
T ss_dssp CEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHHTCCTTC
T ss_pred eeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhcCCCccC
Confidence 456699999999999999999999999999999999998887 7663 3558999999999999999999886544 2
Q ss_pred --CCceeeeeeeeeecCC-CCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCCCC-CCHHHHHH
Q 014843 106 --PDGVCLVVGSCARGFK-DNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGS-PKLEELLE 181 (417)
Q Consensus 106 --~~~vc~~vg~~a~G~~-d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~~~-psL~~l~e 181 (417)
+...+..+.......+ +.+..++.+. .+. ..+|+| .||.+++ ..++++....+ .... .+..+.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~g~~~-~~P~~~~--~~~vg~~~~~~-~~~~~~~~~~~l~ 243 (397)
T 3cgv_A 175 LARNDIISALQYRMINVDVDPDYTDFYLG--SIA-----PAGYIW-VFPKGEG--MANVGIGSSIN-WIHNRFELKNYLD 243 (397)
T ss_dssp CCGGGEEEEEEEEEESCCCCTTEEEEECS--TTS-----TTEEEE-EEEEETT--EEEEEEEEETT-TCSCHHHHHHHHH
T ss_pred CChhheeEEEEEEeccCCCCCCcEEEEeC--CcC-----CCceEE-EEECCCC--eEEEEEEeccc-cccCCCCHHHHHH
Confidence 3333332322222222 2223333322 233 268999 8999875 34566554332 2211 26778888
Q ss_pred HHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhC
Q 014843 182 RYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 261 (417)
Q Consensus 182 ~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~ 261 (417)
+|++..|..+. .++.+...+.+|+.+. ..+...+|++++||||+.++|++|.|+..+++.+..+++.|.+++..
T Consensus 244 ~~~~~~~~~~~-----~~~~~~~~~~~p~~~~-~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~ 317 (397)
T 3cgv_A 244 RFIENHPGLKK-----GQDIQLVTGGVSVSKV-KMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIES 317 (397)
T ss_dssp HHHHTCHHHHT-----SEEEEEEEEEEECCCC-CSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCcCCCC-----CeEEeeeeeeeecCCC-ccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 88887764432 2345666788998653 33566799999999999999999999999999999999999999998
Q ss_pred CCCChhhHhhhc-----CCCccchHHHHHHhhcccccCCCCChhHHHHHHHHHHHHHhhcChhhhcccccccCChhHHHH
Q 014843 262 DFVDSYSLSLLN-----PYMPNLSASWLFQRAMSAKQQSDVSPDFINELLYVNFQCMQKLGDPVLRPFLQDVIKFGPLAK 336 (417)
Q Consensus 262 ~~lsa~~L~~l~-----~Yq~nl~~~~~lqk~M~~~~~~~~~p~~in~ll~~~F~~~~~Lp~~~~~~fl~d~~~~~~l~~ 336 (417)
++.+++.|+.+. .+..++..+..+++++.. .+++. ++.||..+...+-+.. ...+
T Consensus 318 ~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~-----------~~~~ 377 (397)
T 3cgv_A 318 NDYSPQMMQKYEKLIKERFERKHLRNWVAKEKLAM-----LSDDT----LDKLVDIVSEQVLTTI-----------SVEA 377 (397)
T ss_dssp TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCHHH----HHHHHHHHTTSCBCSC-----------SHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCHHH----HHHHHHhcCccchhhc-----------cHHH
Confidence 888888886433 233455666666666632 23343 4555555554443222 3445
Q ss_pred HHHHHHHhCCCChHHH
Q 014843 337 TLGLVMLNKPQIIPSI 352 (417)
Q Consensus 337 ~m~~~~~~~P~~v~~~ 352 (417)
++.+++.++|.+++..
T Consensus 378 ~~~~~~~~~p~~~~~~ 393 (397)
T 3cgv_A 378 ILKAIAEKYPEVVKEL 393 (397)
T ss_dssp HHHHHHHHCC------
T ss_pred HHHHHHHhCHHHHHHH
Confidence 4666788999776543
No 3
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.86 E-value=4e-20 Score=188.55 Aligned_cols=287 Identities=14% Similarity=0.121 Sum_probs=189.9
Q ss_pred eeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEE-EEec---CCc--EEEEEEEEeccCCCchhhhhhhcCCC
Q 014843 32 LEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA---EGK--ILSSHLIIDAMGNFSPVVKQIRSGRK 105 (417)
Q Consensus 32 ~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~-V~t~---~g~--~~~ARlVIDA~G~~Spiarql~~g~~ 105 (417)
...++|..|++.|.+++.+.|++++.+++|+++..++++++ |++. +|+ +++|++||+|+|..|.+.++++...+
T Consensus 94 ~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~~~~~ 173 (453)
T 3atr_A 94 GFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPELP 173 (453)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSCTTSG
T ss_pred cEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcCCCCC
Confidence 34599999999999999999999999999999999988765 5443 565 79999999999999999988754321
Q ss_pred ------CCceeeeeeeeee---cCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCCCCCCH
Q 014843 106 ------PDGVCLVVGSCAR---GFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKL 176 (417)
Q Consensus 106 ------~~~vc~~vg~~a~---G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~~~psL 176 (417)
+...+........ ...+.+...+++.. ++.+ .+|+| .||.+++ ..+++++...+.. .++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~g~~~-~~P~~~~--~~~vg~~~~~~~~--~~~~ 242 (453)
T 3atr_A 174 ITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQ-ETSP-----GGYWW-YFPKGKN--KVNVGLGIQGGMG--YPSI 242 (453)
T ss_dssp GGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCT-TTST-----TSCEE-EEEEETT--EEEEEEEEESSSC--CCCH
T ss_pred cccCCCcccceeeeEEEEecCCCccCCCeEEEEECC-CCCC-----CcEEE-EEECCCC--eEEEEEEecCCCC--CCCH
Confidence 1122332332221 11122222333322 2222 58999 8999875 4677776543321 1245
Q ss_pred HHHHHHHHHh-CCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHH
Q 014843 177 EELLERYWDL-MPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGV 255 (417)
Q Consensus 177 ~~l~e~y~~~-LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI 255 (417)
.+.+.++++. .|.+++. ++.+...+.+|...+.+ +...+|++++||||+.++|++|.|+..+++.+..+|+.|
T Consensus 243 ~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~p~~~~~~-~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l 316 (453)
T 3atr_A 243 HEYYKKYLDKYAPDVDKS-----KLLVKGGALVPTRRPLY-TMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAI 316 (453)
T ss_dssp HHHHHHHHHHHCTTEEEE-----EEEEEEEEEEECSSCCS-CSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhcCCC-----eEEeccceeccCCCCCC-ceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHH
Confidence 6666677654 4444332 34455557788754333 456799999999999999999999999999999999999
Q ss_pred HHHHhCCCCChhhHhhhcCCCc--------cchHHHHHHhhcccccCCCCChhHHHHHHHHHHHHHhh---cChhhhccc
Q 014843 256 YEAVRGDFVDSYSLSLLNPYMP--------NLSASWLFQRAMSAKQQSDVSPDFINELLYVNFQCMQK---LGDPVLRPF 324 (417)
Q Consensus 256 ~~AL~~~~lsa~~L~~l~~Yq~--------nl~~~~~lqk~M~~~~~~~~~p~~in~ll~~~F~~~~~---Lp~~~~~~f 324 (417)
..+++.++.+++.| +.|+. ..+.+..+.+++..-. +..|..+++ ||.+....|
T Consensus 317 ~~~l~~~~~~~~~L---~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~~~~ 380 (453)
T 3atr_A 317 LSAFETGDFSASGL---WDMNICYVNEYGAKQASLDIFRRFLQKLS-------------NDDINYGMKKKIIKEEDLLEA 380 (453)
T ss_dssp HHHHHHTCCSTTTT---THHHHHHHHHTHHHHHHHHHHHHHHTTCC-------------HHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHcCCccHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHcC-------------cHhHHHHHHHcCCChHHHHHH
Confidence 99998877766666 44443 3334444555543211 224555555 888888887
Q ss_pred -ccccCChhHHHHHHHHHHH--hCCCChHHH
Q 014843 325 -LQDVIKFGPLAKTLGLVML--NKPQIIPSI 352 (417)
Q Consensus 325 -l~d~~~~~~l~~~m~~~~~--~~P~~v~~~ 352 (417)
-.++++...+-++. .+.. ++|.+++..
T Consensus 381 i~~~~~~~~~~~~~~-~~~~~~~~p~~~~~l 410 (453)
T 3atr_A 381 SEKGDLHLSVADKAM-RVISGLGRPSLLFKL 410 (453)
T ss_dssp HHHCCCCHHHHHHHH-HHHTTCCSCCGGGGH
T ss_pred hhcCCccccHHHHHH-HHHHhcCChHHHHHH
Confidence 55777655444322 1333 788887543
No 4
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.76 E-value=9.3e-18 Score=167.16 Aligned_cols=223 Identities=12% Similarity=0.034 Sum_probs=151.3
Q ss_pred eeeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEE--EecCCc--EEEEEEEEeccCCCchhhhhhhcCCCC
Q 014843 31 ILEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVL--LLAEGK--ILSSHLIIDAMGNFSPVVKQIRSGRKP 106 (417)
Q Consensus 31 ~~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V--~t~~g~--~~~ARlVIDA~G~~Spiarql~~g~~~ 106 (417)
....|+|..|++.|.++|.+.|++++.+++|++++.++++++| .+.+|+ +++|++||+|+|..|.+.++++...+.
T Consensus 99 ~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g~~~~~ 178 (421)
T 3nix_A 99 WTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFGLDKPS 178 (421)
T ss_dssp CEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTTCEECC
T ss_pred ceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcCCCCCC
Confidence 3456999999999999999999999999999999999888654 455676 799999999999999888887554322
Q ss_pred ---Cceeeeeeeeeec-CCC--CCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCCCC-CCHHHH
Q 014843 107 ---DGVCLVVGSCARG-FKD--NSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGS-PKLEEL 179 (417)
Q Consensus 107 ---~~vc~~vg~~a~G-~~d--~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~~~-psL~~l 179 (417)
.+.+.. +...+ ... .+...+.+...+.. ..+|+| .||..++ ..++++....+..... .+.++.
T Consensus 179 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~-~~P~~~~--~~~vg~~~~~~~~~~~~~~~~~~ 248 (421)
T 3nix_A 179 GFESRRTLF--THIKDVKRPVAAEMEGNRITAVVHK-----PKVWIW-VIPFSNG--NTSVGFVGEPSYFDEYTGTPEER 248 (421)
T ss_dssp SSCCCEEEE--EEEECTTCCC----CCSEEEEEEEE-----TTEEEE-EEECTTS--EEEEEEEECHHHHTTSCSCHHHH
T ss_pred cCCCcEEEE--EEECCCcCCCccCCCCeEEEEEeCC-----CCEEEE-EEEECCC--CEEEEEEecHHHhhhcCCCHHHH
Confidence 122221 11111 110 01122222222222 368999 8999876 2455554322211121 278899
Q ss_pred HHHHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHH
Q 014843 180 LERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAV 259 (417)
Q Consensus 180 ~e~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL 259 (417)
++++.+..|..... +++.....+ ...+|.+.....+...+|++++||||+.++|++|.|+..+++.+..+++.|.+++
T Consensus 249 l~~~~~~~p~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~ 326 (421)
T 3nix_A 249 MRAMIANEGHIAER-FKSEEFLFE-PRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFL 326 (421)
T ss_dssp HHHHHHTCTTTHHH-HTTCCBSSC-CEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHH-HhcCccccC-ceeecccceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHh
Confidence 99999887765432 222221111 1334554322335667999999999999999999999999999999999999999
Q ss_pred hCCCCC
Q 014843 260 RGDFVD 265 (417)
Q Consensus 260 ~~~~ls 265 (417)
+.+..+
T Consensus 327 ~~~~~~ 332 (421)
T 3nix_A 327 KGEEVN 332 (421)
T ss_dssp TTCCCC
T ss_pred cCCchh
Confidence 876543
No 5
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.71 E-value=8.1e-17 Score=167.18 Aligned_cols=270 Identities=13% Similarity=0.095 Sum_probs=163.3
Q ss_pred eeeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeE---EEEecCCc--EEEEEEEEeccCCCchhhhhhhcCCC
Q 014843 31 ILEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA---VLLLAEGK--ILSSHLIIDAMGNFSPVVKQIRSGRK 105 (417)
Q Consensus 31 ~~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v---~V~t~~g~--~~~ARlVIDA~G~~Spiarql~~g~~ 105 (417)
....++|..|++.|.+++.+.|++++.+++|+++..+++++ ++++.+|+ +++|++||+|+|..|.+.++++....
T Consensus 104 ~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~lg~~~~ 183 (512)
T 3e1t_A 104 FAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAVGERVY 183 (512)
T ss_dssp CEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGTCCEEE
T ss_pred eeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHcCCCcc
Confidence 34569999999999999999999999999999999998864 44444564 89999999999999999999833211
Q ss_pred CC--ceeeeeeeeeec---CCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCCC-CCCHHHH
Q 014843 106 PD--GVCLVVGSCARG---FKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAG-SPKLEEL 179 (417)
Q Consensus 106 ~~--~vc~~vg~~a~G---~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~~-~psL~~l 179 (417)
.. ..+.. .....+ .+....+.++.... ..+|+| .||..++ ..++++..-.+.... ..+.++.
T Consensus 184 ~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~--------~~G~~~-~~Pl~~~--~~~vg~~~~~~~~~~~~~~~~~~ 251 (512)
T 3e1t_A 184 SRFFQNVAL-YGYFENGKRLPAPRQGNILSAAF--------QDGWFW-YIPLSDT--LTSVGAVVSREAAEAIKDGHEAA 251 (512)
T ss_dssp CSTTCEEEE-EEEEESCCCCSTTCTTSEEEEEE--------TTEEEE-EEECSSS--EEEEEEEEEHHHHTTTSSCHHHH
T ss_pred CchhcceEE-EEEecCCccCCCCCcCceEEEEe--------CCceEE-EEEeCCC--eEEEEEEecHHHhhhhcCCHHHH
Confidence 11 11111 111121 22222233322221 258999 8999865 244444432221111 1257788
Q ss_pred HHHHHHhCCcccCCCCCccc-eEEeeeeecCCC---CCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHH
Q 014843 180 LERYWDLMPEYQGVTLDNLE-IQRVIYGIFPTY---RDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGV 255 (417)
Q Consensus 180 ~e~y~~~LP~y~g~~l~~~~-~~~~~~G~~P~~---~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI 255 (417)
++++++..|..+.. +.+.. +.....+.++.. .....+...+|++++||||+.++|++|.|+..+++.+..+++.|
T Consensus 252 ~~~~l~~~p~~~~~-l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L 330 (512)
T 3e1t_A 252 LLRYIDRCPIIKEY-LAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAI 330 (512)
T ss_dssp HHHHHHTSHHHHHH-HTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCchHHHH-HhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHH
Confidence 88887766544332 11110 000011222221 10112455789999999999999999999999999999999999
Q ss_pred HHHHhCCCCChhhHhhhcCCCccchHH--------HHHHhhccccc-----CCCCChhHHHHHHHHHHHHHhhcC
Q 014843 256 YEAVRGDFVDSYSLSLLNPYMPNLSAS--------WLFQRAMSAKQ-----QSDVSPDFINELLYVNFQCMQKLG 317 (417)
Q Consensus 256 ~~AL~~~~lsa~~L~~l~~Yq~nl~~~--------~~lqk~M~~~~-----~~~~~p~~in~ll~~~F~~~~~Lp 317 (417)
..+++.+.-.++.|+ .|+...... ..+-++...+. ....-++ .++.++.|+..+..+-
T Consensus 331 ~~~l~~~~~~~~aL~---~Ye~~~~~~~~~~~~~~~~~y~~~~r~ds~fW~~~~~~~~-~~~~~~~f~~~~~g~~ 401 (512)
T 3e1t_A 331 NTCLAGEMSEQRCFE---EFERRYRREYGNFYQFLVAFYDMNQDTDSYFWSARKIINT-EERANEAFVRLIAGRS 401 (512)
T ss_dssp HHHTTTCSCHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCCTTCHHHHTSSCCCS-HHHHHHHHHHHHTTCC
T ss_pred HHHHcCCccHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHhhhcc-CcHHHHHHHHHHcCCC
Confidence 998865432233443 333322211 12222222111 1122233 6788899998887753
No 6
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.65 E-value=1.2e-14 Score=145.01 Aligned_cols=206 Identities=16% Similarity=0.076 Sum_probs=127.6
Q ss_pred eeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchhhhhh-hcCCCCC--c
Q 014843 32 LEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQI-RSGRKPD--G 108 (417)
Q Consensus 32 ~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spiarql-~~g~~~~--~ 108 (417)
...++|..|++.|.+++.+ ++|+.+++|++++.++++|+|++.+|++++|++||+|||..|.+.+++ +...++. +
T Consensus 121 ~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~ 198 (407)
T 3rp8_A 121 PCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSALRPWVLGFTPQRRYAG 198 (407)
T ss_dssp CEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCSSHHHHHSSCCCCEEEE
T ss_pred eEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChHHHHHhcCCCCCCcccC
Confidence 3458999999999999987 889999999999999999999998888999999999999999999998 4332222 2
Q ss_pred eeeeeeeeeecCC-C-CCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCC-CCCC-CHHHHHHHHH
Q 014843 109 VCLVVGSCARGFK-D-NSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQ-AGSP-KLEELLERYW 184 (417)
Q Consensus 109 vc~~vg~~a~G~~-d-~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~-~~~p-sL~~l~e~y~ 184 (417)
.+... .+.. ++ . .......... . ..+++| .||.+++ ....++....... ...+ ...+.+.+.+
T Consensus 199 ~~~~~-~~~~-~~~~~~~~~~~~~~~---~-----~~~~~~-~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 265 (407)
T 3rp8_A 199 YVNWN-GLVE-IDEALAPGDQWTTFV---G-----EGKQVS-LMPVSAG--RFYFFFDVPLPAGLAEDRDTLRADLSRYF 265 (407)
T ss_dssp EEEEE-EEEE-CCTTTCCTTEEEEEE---E-----TTEEEE-EEEETTT--EEEEEEEEECCTTCSCCTTTHHHHHHHHT
T ss_pred cEEEE-EEEe-cccccCCCCceEEEE---C-----CCcEEE-EEEcCCC--eEEEEEEeCCCcCCCCCchhHHHHHHHHh
Confidence 21111 1111 11 1 1111211111 1 257888 7999875 2333333322211 1122 2333333333
Q ss_pred Hh-CCcccCC-C-CCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHH
Q 014843 185 DL-MPEYQGV-T-LDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 256 (417)
Q Consensus 185 ~~-LP~y~g~-~-l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~ 256 (417)
.. .|..+.. + .+.....+ ...+|... . .+...+|++++||||..++|++|.|+..+++.+..|++.|.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~-~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~ 336 (407)
T 3rp8_A 266 AGWAPPVQKLIAALDPQTTNR--IEIHDIEP-F-SRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFR 336 (407)
T ss_dssp TTCCHHHHHHHHHSCGGGCEE--EEEEECCC-C-SCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cCCChHHHHHHHcCCccceeE--EeeEecCC-C-CceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHh
Confidence 21 1111110 0 01111111 13344321 1 35567999999999999999999999999999777777775
No 7
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.64 E-value=1.5e-16 Score=169.59 Aligned_cols=226 Identities=13% Similarity=0.084 Sum_probs=147.3
Q ss_pred eeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEE-CCeEEEEec-CC--cEEEEEEEEeccCCCchhhhhhhcCCCCC
Q 014843 32 LEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTY-ENAAVLLLA-EG--KILSSHLIIDAMGNFSPVVKQIRSGRKPD 107 (417)
Q Consensus 32 ~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~-~d~v~V~t~-~g--~~~~ARlVIDA~G~~Spiarql~~g~~~~ 107 (417)
...|+|..|.+.|.+.|.+.|++++.+++|+++..+ ++.+.|++. +| .+++|++||+|+|..|.+.++++......
T Consensus 122 ~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~ 201 (591)
T 3i3l_A 122 AVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLGVRQYDE 201 (591)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHHTCEEEEE
T ss_pred eEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHcCCCCCCc
Confidence 456999999999999999999999999999999986 667788876 56 58999999999999999999875542211
Q ss_pred ceee-eeeeeeec---CCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCC-CC-CCHHHHHH
Q 014843 108 GVCL-VVGSCARG---FKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQA-GS-PKLEELLE 181 (417)
Q Consensus 108 ~vc~-~vg~~a~G---~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~-~~-psL~~l~e 181 (417)
.... .+.....+ .+....+.++.... ..+++| .||..++ ..+++++...+... .. .+.+++++
T Consensus 202 ~~~~~av~~~~~~~~~~~~~~~~~~~~~~~--------~~G~~w-~iPl~~~--~~sv~~~~~~~~~~~l~~~~~~~~~~ 270 (591)
T 3i3l_A 202 FYRNFAVWSYFKLKDPFEGDLKGTTYSITF--------EDGWVW-MIPIKDD--LYSVGLVVDRSKSAEVREQGADAFYS 270 (591)
T ss_dssp EEEEEEEEEEEECCCSCCSTTTTCEEEEEE--------TTEEEE-EEECSSS--EEEEEEEEEGGGHHHHHHHCHHHHHH
T ss_pred cccceEEEEEEecCccccCCCCCceEEEEc--------CCcEEE-EEECCCC--eEEEEEEcCHHHHhhhccCCHHHHHH
Confidence 1111 11111111 11222233333221 258999 8998864 35555543322110 00 14567777
Q ss_pred HHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhC
Q 014843 182 RYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 261 (417)
Q Consensus 182 ~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~ 261 (417)
++.+..|..... ++..... .....++.|.....+...+|++++||||+.++|++|.|+..+++.+..+|+.|..+++.
T Consensus 271 ~l~~~~p~l~~~-l~~~~~~-~~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~ 348 (591)
T 3i3l_A 271 STLAKCAKAMDI-LGGAEQV-DEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRH 348 (591)
T ss_dssp HHHTTCHHHHHH-HTTCEEC-SCCEEEEEEEEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhCHHHHHH-HhcCccc-cCceEecccccchhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhC
Confidence 777666543221 1111100 00012232221122455789999999999999999999999999999999999999987
Q ss_pred CCCChhhHh
Q 014843 262 DFVDSYSLS 270 (417)
Q Consensus 262 ~~lsa~~L~ 270 (417)
+...+..++
T Consensus 349 ~~~~~~al~ 357 (591)
T 3i3l_A 349 GDEKDAVHA 357 (591)
T ss_dssp GGGHHHHHH
T ss_pred CchHHHHHH
Confidence 765555553
No 8
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.62 E-value=3.2e-15 Score=148.10 Aligned_cols=263 Identities=12% Similarity=0.084 Sum_probs=154.2
Q ss_pred eeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEEC-CeEEEEe-cCCc--EEEEEEEEeccCCCchhhhhhhcCCCC-
Q 014843 32 LEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAVLLL-AEGK--ILSSHLIIDAMGNFSPVVKQIRSGRKP- 106 (417)
Q Consensus 32 ~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~-d~v~V~t-~~g~--~~~ARlVIDA~G~~Spiarql~~g~~~- 106 (417)
...+++..+.+.|.+++.+.|++++.+++|++++.++ +++.|++ .+|+ +++|++||+|||..|.+.++++....+
T Consensus 97 ~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~~~~~~~ 176 (394)
T 1k0i_A 97 VTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGISRQSIPAERLKV 176 (394)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCSTGGGSCGGGCEE
T ss_pred eEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHHHHhcCcccccc
Confidence 3457889999999999999999999999999998864 5677776 5776 799999999999999998887543211
Q ss_pred -Cceeee-eeeeeecCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCC-CCCCHHHHHHHH
Q 014843 107 -DGVCLV-VGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQA-GSPKLEELLERY 183 (417)
Q Consensus 107 -~~vc~~-vg~~a~G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~-~~psL~~l~e~y 183 (417)
.+.... ...+...++. +..++.+... .++|+| .+|..++ ..+.++. ...... ...+.++..+++
T Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~g~~~-~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~l 243 (394)
T 1k0i_A 177 FERVYPFGWLGLLADTPP-VSHELIYANH--------PRGFAL-CSQRSAT--RSQYYVQ-VPLSEKVEDWSDERFWTEL 243 (394)
T ss_dssp EEEEEEEEEEEEEESSCC-SCSSCEEECC--------TTCCEE-EEEEETT--EEEEEEE-ECTTCCGGGCCHHHHHHHH
T ss_pred ccccccceeEEEecCCCC-CccceEEEEc--------CCceEE-EEecCCC--cEEEEEE-eCCCCCccccCHHHHHHHH
Confidence 111110 0011111111 1122222221 257888 6776543 2344433 222111 111455666666
Q ss_pred HHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhCCC
Q 014843 184 WDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDF 263 (417)
Q Consensus 184 ~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~~~ 263 (417)
.+.++..-+..+....... ...+|.......+...+|++++||||...+|++|.|+..+++.+..|++.|..+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~- 320 (394)
T 1k0i_A 244 KARLPSEVAEKLVTGPSLE--KSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREG- 320 (394)
T ss_dssp HHTSCHHHHHHCCCCCEEE--EEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHhhCcccccccccCccee--eEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccC-
Confidence 6665442111111111111 1233432211224557899999999999999999999999999999999999988654
Q ss_pred CChhhHhhhcCCCcc--------chHHHHHHhhcccccCCCCChhHHHHHHHHHHHHHhhcC
Q 014843 264 VDSYSLSLLNPYMPN--------LSASWLFQRAMSAKQQSDVSPDFINELLYVNFQCMQKLG 317 (417)
Q Consensus 264 lsa~~L~~l~~Yq~n--------l~~~~~lqk~M~~~~~~~~~p~~in~ll~~~F~~~~~Lp 317 (417)
.++. ++.|+.. +..+..+.+++...+.+ ..+...+-+..|..+...|
T Consensus 321 -~~~~---L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~---~~~~~~~r~~~l~~~~~~~ 375 (394)
T 1k0i_A 321 -RGEL---LERYSAICLRRIWKAERFSWWMTSVLHRFPDT---DAFSQRIQQTELEYYLGSE 375 (394)
T ss_dssp -CGGG---GGGHHHHHHHHHHHHHHHHHHHHHHHSCCTTC---CHHHHHHHHHHHHHHHHCH
T ss_pred -chHH---HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC---ChHHHHHHHHHHHhhcCCH
Confidence 2333 4566532 22333344455533321 1233334455555555444
No 9
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.60 E-value=1.8e-15 Score=150.30 Aligned_cols=210 Identities=13% Similarity=0.073 Sum_probs=134.5
Q ss_pred eeeccChHHHHHHHHHHHhhc-CcEEEcCceEEEEEEECCeE--EEEecCCcEEEEEEEEeccCCCchhhhhhhcCCCCC
Q 014843 31 ILEFREPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAA--VLLLAEGKILSSHLIIDAMGNFSPVVKQIRSGRKPD 107 (417)
Q Consensus 31 ~~~~Vdr~~L~~~L~~ka~~~-Gg~i~~~t~v~~i~~~~d~v--~V~t~~g~~~~ARlVIDA~G~~Spiarql~~g~~~~ 107 (417)
....++|..|.+.|.+++.+. |++++.+++|++++.++++| .|++.+|++++|++||+|+|..|.+.++++...++.
T Consensus 100 ~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg~~~~~~ 179 (399)
T 2x3n_A 100 YFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLLDIDVER 179 (399)
T ss_dssp CEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTSCCCCCC
T ss_pred ccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHHhCCCcccc
Confidence 345699999999999999997 99999999999999999998 888888889999999999999999988875442211
Q ss_pred ----c---eeeeeeeeeecCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEE-eeCCCC---CC-CC
Q 014843 108 ----G---VCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFT-YIDPQA---GS-PK 175 (417)
Q Consensus 108 ----~---vc~~vg~~a~G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~-y~~~~~---~~-ps 175 (417)
+ .|. ...+-...+ .+. ..+.+ ..+++| .||.+++ .++.+. +..... .. .+
T Consensus 180 ~p~~~~~~~~~-~~~~~~~~~----~~~-~~~~~-------~~~~~~-~~p~~~~----~~~~~~~~~~~~~~~~~~~~~ 241 (399)
T 2x3n_A 180 RPYPSPMLVGT-FALAPCVAE----RNR-LYVDS-------QGGLAY-FYPIGFD----RARLVVSFPREEARELMADTR 241 (399)
T ss_dssp CCCSSCEEEEE-EECCHHHHH----CEE-EEECT-------TSCEEE-EEEETTT----EEEEEEECCHHHHHHHHHSTT
T ss_pred CCCCCCceEEE-EEEecCCCC----Ccc-EEEcC-------CCcEEE-EEEcCCC----EEEEEEEeCccccccccccCC
Confidence 1 111 111100111 111 11211 147888 7898753 233332 121100 00 12
Q ss_pred HHHHHHHHHHhC-CcccCCCCCccceEE-eeeeecCCCC-CCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHH
Q 014843 176 LEELLERYWDLM-PEYQGVTLDNLEIQR-VIYGIFPTYR-DSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLS 252 (417)
Q Consensus 176 L~~l~e~y~~~L-P~y~g~~l~~~~~~~-~~~G~~P~~~-~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla 252 (417)
.+++. ++++.+ |..+. +.++... .....+|.+. ....+...+|++++||||..++|++|.|+..+++.+..|+
T Consensus 242 ~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La 317 (399)
T 2x3n_A 242 GESLR-RRLQRFVGDESA---EAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALA 317 (399)
T ss_dssp SHHHH-HHHHTTCCGGGH---HHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHH
T ss_pred HHHHH-HHHhhcCCcchh---hHHhcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHH
Confidence 33333 333333 22210 0111011 0113456643 1122456799999999999999999999999999999999
Q ss_pred HHHHHHHhCC
Q 014843 253 TGVYEAVRGD 262 (417)
Q Consensus 253 ~gI~~AL~~~ 262 (417)
+.|..+++.+
T Consensus 318 ~~L~~~~~~~ 327 (399)
T 2x3n_A 318 DALDLALRDA 327 (399)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHhhhccc
Confidence 9999998754
No 10
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.60 E-value=3.8e-14 Score=147.36 Aligned_cols=221 Identities=14% Similarity=0.127 Sum_probs=145.2
Q ss_pred eeeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCc---EEEEEEEEeccCCCchhhhhhhcCC---
Q 014843 31 ILEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK---ILSSHLIIDAMGNFSPVVKQIRSGR--- 104 (417)
Q Consensus 31 ~~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~---~~~ARlVIDA~G~~Spiarql~~g~--- 104 (417)
....+++..|.+.|.+++.+.|++|..+++|++++.++++|+|++.++. +++|++||+|||..|.+.++++...
T Consensus 100 ~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~ 179 (499)
T 2qa2_A 100 GVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAGFDFPGT 179 (499)
T ss_dssp EEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHTTCCCCEE
T ss_pred ceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHcCCCCCCC
Confidence 4456899999999999999999999999999999999999999876654 7999999999999999999885432
Q ss_pred CCCceeeeeeeeeecCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCC--CC-CCHHHHHH
Q 014843 105 KPDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQA--GS-PKLEELLE 181 (417)
Q Consensus 105 ~~~~vc~~vg~~a~G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~--~~-psL~~l~e 181 (417)
.....+.++... .++. ...+.+.+. ..+++| .+|.+++ ...+++....+... .. .+.+++.+
T Consensus 180 ~~~~~~~~~~v~---~~~~-~~~~~~~~~--------~~g~~~-~~P~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (499)
T 2qa2_A 180 SASREMFLADIR---GCEI-TPRPIGETV--------PLGMVM-SAPLGDG--VDRIIVCERGAPARRRTGPPPYQEVAA 244 (499)
T ss_dssp CCCCCEEEEEEE---SCCC-CCEEEEEEE--------TTEEEE-EEECSSS--CEEEEEEETTCCCCCCSSSCCHHHHHH
T ss_pred CCccEEEEEEEE---ECCC-CcceEEEEC--------CCeEEE-EEEcCCC--EEEEEEEecCCCCccccCCCCHHHHHH
Confidence 122222221111 1111 122222221 147888 8999876 25555543232111 11 26666665
Q ss_pred HHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhC
Q 014843 182 RYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 261 (417)
Q Consensus 182 ~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~ 261 (417)
.+.+.++. .....+..+. ..++.......+...+||+++||||...+|+.|.|+..+++.+.-|+..|+.+++.
T Consensus 245 ~l~~~~~~--~~~~~~~~~~----~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g 318 (499)
T 2qa2_A 245 AWQRLTGQ--DISHGEPVWV----SAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSG 318 (499)
T ss_dssp HHHHHHSC--CCTTCEEEEE----EEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhCC--CCCccceeEE----EEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcC
Confidence 55544431 1111122111 23333211122445689999999999999999999999999999999999998853
Q ss_pred CCCChhhHhhhcCCC
Q 014843 262 DFVDSYSLSLLNPYM 276 (417)
Q Consensus 262 ~~lsa~~L~~l~~Yq 276 (417)
...++.| ..|+
T Consensus 319 -~~~~~~L---~~Ye 329 (499)
T 2qa2_A 319 -RAPAGLL---DTYH 329 (499)
T ss_dssp -SSCTHHH---HHHH
T ss_pred -CCChHHH---HHHH
Confidence 3344444 4454
No 11
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.59 E-value=2.3e-14 Score=149.00 Aligned_cols=218 Identities=13% Similarity=0.063 Sum_probs=142.6
Q ss_pred eeeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCc---EEEEEEEEeccCCCchhhhhhhcCC---
Q 014843 31 ILEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK---ILSSHLIIDAMGNFSPVVKQIRSGR--- 104 (417)
Q Consensus 31 ~~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~---~~~ARlVIDA~G~~Spiarql~~g~--- 104 (417)
....+++..|.+.|.+++.+.|++|..+++|++++.++++|+|++.++. +++|++||+|||..|.+.++++...
T Consensus 99 ~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg~~~~~~ 178 (500)
T 2qa1_A 99 AAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGFDFPGT 178 (500)
T ss_dssp CEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHHTTCCCCEE
T ss_pred ceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHcCCCcCCC
Confidence 3456899999999999999999999999999999999999999876654 7999999999999999999886442
Q ss_pred CCCceeeeeeeeeecCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCC---CCCCHHHHHH
Q 014843 105 KPDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQA---GSPKLEELLE 181 (417)
Q Consensus 105 ~~~~vc~~vg~~a~G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~---~~psL~~l~e 181 (417)
.....+.++... .++. ...+.+.+. ..+++| .+|.+++ ..++++..+.+... ...+.+++.+
T Consensus 179 ~~~~~~~~~~~~---~~~~-~~~~~~~~~--------~~g~~~-~~p~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (500)
T 2qa1_A 179 AATMEMYLADIK---GVEL-QPRMIGETL--------PGGMVM-VGPLPGG--ITRIIVCERGTPPQRRETPPSWHEVAD 243 (500)
T ss_dssp CCCCEEEEEEEE---SCCC-CCEEEEEEE--------TTEEEE-EEEETTT--EEEEEEEETTCCC-----CCCHHHHHH
T ss_pred ccceEEEEEEEE---eCCC-CCceEEEEC--------CCcEEE-EEEcCCC--EEEEEEEcCCCCCccccCCCCHHHHHH
Confidence 222223221111 1111 122222221 147888 7998765 35555543222111 1126666665
Q ss_pred HHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhC
Q 014843 182 RYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 261 (417)
Q Consensus 182 ~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~ 261 (417)
.+.+.++. .....+..+. ..++.......+...+||+++||||...+|+.|.|+..+++.+.-|+..|+.+++.
T Consensus 244 ~l~~~~~~--~~~~~~~~~~----~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g 317 (500)
T 2qa1_A 244 AWKRLTGD--DIAHAEPVWV----SAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNG 317 (500)
T ss_dssp HHHHHHSC--CCTTSEEEEE----EEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCC--CCCccceeEE----EEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcC
Confidence 55544431 1111222111 12333111122445689999999999999999999999999999999999998853
Q ss_pred CCCChhhHh
Q 014843 262 DFVDSYSLS 270 (417)
Q Consensus 262 ~~lsa~~L~ 270 (417)
.-.++.|+
T Consensus 318 -~~~~~~L~ 325 (500)
T 2qa1_A 318 -TATEELLD 325 (500)
T ss_dssp -SSCHHHHH
T ss_pred -CCChHHHH
Confidence 33444453
No 12
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.59 E-value=1.7e-14 Score=152.85 Aligned_cols=237 Identities=15% Similarity=0.073 Sum_probs=150.9
Q ss_pred eeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEe--cCC-cEEEEEEEEeccCCCchhhhhhhcCC---C
Q 014843 32 LEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEG-KILSSHLIIDAMGNFSPVVKQIRSGR---K 105 (417)
Q Consensus 32 ~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t--~~g-~~~~ARlVIDA~G~~Spiarql~~g~---~ 105 (417)
...+++..|.+.|.+++.+.|++|+.+++|++++.++++|+|++ .+| ++++|++||+|||..|.+.++++... +
T Consensus 142 ~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lGi~~~~~~ 221 (570)
T 3fmw_A 142 TGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLAADRFPGTE 221 (570)
T ss_dssp BBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHTTCCCCCCC
T ss_pred eEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHcCCCCccce
Confidence 44599999999999999999999999999999999999999887 567 68999999999999999999885442 2
Q ss_pred CCceeeeeeeeeecCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCc-eEEEEEeeCCC--C-CCCCHHHHHH
Q 014843 106 PDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDR-TTYMFTYIDPQ--A-GSPKLEELLE 181 (417)
Q Consensus 106 ~~~vc~~vg~~a~G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~-ttyLf~y~~~~--~-~~psL~~l~e 181 (417)
....+.++.. ..+.... . +.... . ..+++|..||.+++ .. ++++....... . ...+.+++.+
T Consensus 222 ~~~~~~~~~v---~~~~~~~-~--~~~~~-~-----~~G~~~~~~P~~~g--~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 287 (570)
T 3fmw_A 222 ATVRALIGYV---TTPEREV-P--RRWER-T-----PDGILVLAFPPEGG--LGPGWSSSSTGHSPAADEGPVTLEDLGA 287 (570)
T ss_dssp CCEEEEEEEC---CCCSCSS-C--CCCCC-C-----CSSCEEECCCC--------CEEEEEESCC-----CCCCHHHHHH
T ss_pred eeeEEEEEEE---EecCCCc-c--eEEEe-c-----CCEEEEEEeecCCC--eEEEEEEEeCCCCccccccCCCHHHHHH
Confidence 2222221111 1111110 1 11101 1 35788833899876 24 56655443221 1 1226766666
Q ss_pred HHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhC
Q 014843 182 RYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 261 (417)
Q Consensus 182 ~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~ 261 (417)
.+.+.++.- +...+... ....+|.......+...+||+++||||...+|++|.|+..+++.+.-|+..|+.+++.
T Consensus 288 ~l~~~~~~~----~~~~~~~~-~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g 362 (570)
T 3fmw_A 288 AVARVRGTP----LTLTEPVS-WLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRG 362 (570)
T ss_dssp HTTSSSSCC----CCCCSCCE-EEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhhcc----cccceeee-eeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcC
Confidence 555444321 11111110 1134555332233566799999999999999999999999999999999999999864
Q ss_pred CCCChhhHhhhcCCC--------ccchHHHHHHhhccc
Q 014843 262 DFVDSYSLSLLNPYM--------PNLSASWLFQRAMSA 291 (417)
Q Consensus 262 ~~lsa~~L~~l~~Yq--------~nl~~~~~lqk~M~~ 291 (417)
.-+++.| +.|+ ..+..+..+.++|+-
T Consensus 363 -~~~~~lL---~~Ye~eR~~~~~~~~~~s~~~~~l~~~ 396 (570)
T 3fmw_A 363 -WGSEELL---DTYHDERHPVAERVLLNTRAQLALMRP 396 (570)
T ss_dssp -CCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred -CCcHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3344545 4444 344445555566553
No 13
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.57 E-value=1e-13 Score=147.04 Aligned_cols=242 Identities=13% Similarity=0.082 Sum_probs=144.3
Q ss_pred eccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCe-EE-EEec------CC---------cEEEEEEEEeccCCCch
Q 014843 33 EFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AV-LLLA------EG---------KILSSHLIIDAMGNFSP 95 (417)
Q Consensus 33 ~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~-v~-V~t~------~g---------~~~~ARlVIDA~G~~Sp 95 (417)
..+++..|+++|.+++.+.|++|+.+++|+++..++++ ++ |.+. +| .+++|++||+|+|..|.
T Consensus 139 ~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 139 YVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred EEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 45899999999999999999999999999999998764 43 6654 23 58999999999999999
Q ss_pred hhhhhh----cC--CCCCceeeeeeeeeecCC--CCCcceEEEecc-cccccCCCCCceeeeecCCC--CCCCCceEEEE
Q 014843 96 VVKQIR----SG--RKPDGVCLVVGSCARGFK--DNSTSDVIYSSS-SVKKVGDSEVQLFWEAFPAG--SGPLDRTTYMF 164 (417)
Q Consensus 96 iarql~----~g--~~~~~vc~~vg~~a~G~~--d~~~gei~fs~~-~v~~~~~~~~qy~We~FP~~--dg~~e~ttyLf 164 (417)
+.+++. .. ..+......+.... .++ ....+.+....+ +... ...+..| .||.. ++ ..++++.
T Consensus 219 vr~~l~~~~gl~~~~~p~~~g~g~~~~~-~v~~~~~~~~~~~~~~g~~~~~---~~~gg~~-~~~~~~~~~--~~~vg~~ 291 (584)
T 2gmh_A 219 LAKQLYKKFDLRANCEPQTYGIGLKELW-VIDEKKWKPGRVDHTVGWPLDR---HTYGGSF-LYHLNEGEP--LLALGFV 291 (584)
T ss_dssp HHHHHHHHTTTTTTSCCCCEEEEEEEEE-ECCGGGCCTTEEEEEEETTSCT---TSCEEEE-EEECCSSSC--EEEEEEE
T ss_pred HHHHHHHHhCCCCCCCchhHHhhhhhhe-ecCcccccCCeEEEEEeccccC---CcCCceE-EEEecCCCC--eEEEEEE
Confidence 998872 21 12222221111111 111 112233322221 1111 0124456 56765 33 3555555
Q ss_pred EeeCCCCCCCCHHHHHHHHHHhCCcccCCCCCccceEEeeeeec-CCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhH
Q 014843 165 TYIDPQAGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIF-PTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGS 243 (417)
Q Consensus 165 ~y~~~~~~~psL~~l~e~y~~~LP~y~g~~l~~~~~~~~~~G~~-P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs 243 (417)
...+......+..+.++++.. .|..+.. ++..++.......+ |.....-.+...+|++++||||+.++|++|.|+..
T Consensus 292 ~~~~~~~~~~~~~~~l~~~~~-~p~i~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~ 369 (584)
T 2gmh_A 292 VGLDYQNPYLSPFREFQRWKH-HPSIKPT-LEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHT 369 (584)
T ss_dssp EETTCCCTTCCHHHHHHHHTT-STTTHHH-HTTCEEEEEEEEEEECCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHH
T ss_pred EecCcccccCChHHHHHHHHh-ChHHHHH-hCCCeEEEecceEccCCCcccCCccccCCEEEEcccccccCccccccHHH
Confidence 332211111144556666643 2333221 22222222111122 22111112456799999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHhCCC-CChhhHhhhcCCCccchHHH
Q 014843 244 LTRHLGRLSTGVYEAVRGDF-VDSYSLSLLNPYMPNLSASW 283 (417)
Q Consensus 244 ~lR~l~rla~gI~~AL~~~~-lsa~~L~~l~~Yq~nl~~~~ 283 (417)
+++++..||+.|..+++.++ ..+++...++.|+....-+|
T Consensus 370 Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye~~r~~~~ 410 (584)
T 2gmh_A 370 AMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSW 410 (584)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHcCCcchhhhhhhHHHHHHHHHHhH
Confidence 99999999999999998764 33332001466776665554
No 14
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.48 E-value=1.7e-12 Score=134.97 Aligned_cols=220 Identities=18% Similarity=0.086 Sum_probs=133.8
Q ss_pred eeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECC----eEEEEecCC---cEEEEEEEEeccCCCchhhhhhhcCC
Q 014843 32 LEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN----AAVLLLAEG---KILSSHLIIDAMGNFSPVVKQIRSGR 104 (417)
Q Consensus 32 ~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d----~v~V~t~~g---~~~~ARlVIDA~G~~Spiarql~~g~ 104 (417)
...+++..|.+.|.+++.+.|++|+.+++|++++.+++ +|+|++.++ .+++|++||+|||..|.+.++++...
T Consensus 114 ~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~ 193 (535)
T 3ihg_A 114 WAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGR 193 (535)
T ss_dssp CBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCE
T ss_pred ccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCc
Confidence 34589999999999999999999999999999999999 999887665 68999999999999999999886543
Q ss_pred CCCce-eeeeeeeee-cCCC---CCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCCC---CCCH
Q 014843 105 KPDGV-CLVVGSCAR-GFKD---NSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAG---SPKL 176 (417)
Q Consensus 105 ~~~~v-c~~vg~~a~-G~~d---~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~~---~psL 176 (417)
+.... ...+..... .++. .......+...+ .+.+| .+|..++ ..-.+...+...... ..+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~~~-~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~ 262 (535)
T 3ihg_A 194 YGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHP--------EFKGT-FGPTDRP--DRHTLFVEYDPDEGERPEDFTP 262 (535)
T ss_dssp EEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECS--------SCEEE-EEECSST--TEEEEEEEECTTTTCCGGGCCH
T ss_pred CCCCccceEEEEEEeccChhhccCCceEEEEEECC--------CceEE-EEEecCC--CEEEEEEeeCccccCccccCCH
Confidence 21110 000111111 1111 000111111111 34455 4676642 122222223322111 1144
Q ss_pred HHHHHHHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHH
Q 014843 177 EELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 256 (417)
Q Consensus 177 ~~l~e~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~ 256 (417)
+++.+.+.+.++. ... ..++.. ...+|.......+...+||+++||||..++|++|.|+..+++.+.-|+..|+
T Consensus 263 e~~~~~l~~~~~~-~~~---~~~~~~--~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La 336 (535)
T 3ihg_A 263 QRCVELIGLALDA-PEV---KPELVD--IQGWEMAARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLA 336 (535)
T ss_dssp HHHHHHHHHHHTC-SSC---CCEEEE--EEEEEEEEEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCC---ceeEEE--eeEeeeeEEEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHH
Confidence 4444433333321 111 112221 1223332111224556999999999999999999999999999999999999
Q ss_pred HHHhCCCCChhhH
Q 014843 257 EAVRGDFVDSYSL 269 (417)
Q Consensus 257 ~AL~~~~lsa~~L 269 (417)
.+++.. -+++.|
T Consensus 337 ~~l~g~-~~~~lL 348 (535)
T 3ihg_A 337 AVLQGQ-AGAGLL 348 (535)
T ss_dssp HHHTTS-SCTTHH
T ss_pred HHhcCC-CcHHHH
Confidence 988643 334444
No 15
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.47 E-value=6.3e-13 Score=137.02 Aligned_cols=207 Identities=11% Similarity=0.062 Sum_probs=123.8
Q ss_pred eeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCe--EEEEecCCcEEEEEEEEeccCCCchhhhhh-hcCC----
Q 014843 32 LEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAEGKILSSHLIIDAMGNFSPVVKQI-RSGR---- 104 (417)
Q Consensus 32 ~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~--v~V~t~~g~~~~ARlVIDA~G~~Spiarql-~~g~---- 104 (417)
...++|.+|++.|.+++.+.|++++.+ +|++++.++++ +.|++.+|++++|++||+|+|..|.+.++. +.+.
T Consensus 167 ~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~ 245 (511)
T 2weu_A 167 AYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQSFS 245 (511)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEEECT
T ss_pred eEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCcccc
Confidence 445999999999999999999999999 99999987776 667777787899999999999999996553 3221
Q ss_pred --CCCceeeeeeeeeecCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCCCCCCHHHHHHH
Q 014843 105 --KPDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEELLER 182 (417)
Q Consensus 105 --~~~~vc~~vg~~a~G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~~~psL~~l~e~ 182 (417)
.+...+..+......-... ........ . ..+++| .||..++ ..++. .+... ..+.++..+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~-----~~g~~~-~~P~~~~---~~~g~-~~~~~---~~~~~~~~~~ 308 (511)
T 2weu_A 246 DVLPNNRAVALRVPRENDEDM-RPYTTATA---M-----SAGWMW-TIPLFKR---DGNGY-VYSDE---FISPEEAERE 308 (511)
T ss_dssp TTCCCCEEEEEEEECSSGGGC-CSSEEEEE---E-----TTEEEE-EEECSSE---EEEEE-EECTT---TSCHHHHHHH
T ss_pred ccCcccceEEEEeccCCCCCC-Ccceecee---c-----CCCcEE-EEECCCc---eEEEE-EECCC---CCCHHHHHHH
Confidence 1111111111110000000 01111111 1 257999 8998752 33332 23221 1233444444
Q ss_pred HHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhCC
Q 014843 183 YWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGD 262 (417)
Q Consensus 183 y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~~ 262 (417)
+.+.+..... +.+. ..+|.|.....+...+|++++||||+.++|++|.|+..++..+. .++++|..+
T Consensus 309 l~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~----~La~~l~~~ 375 (511)
T 2weu_A 309 LRSTVAPGRD--DLEA-------NHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIE----QLVKHFPGE 375 (511)
T ss_dssp HHHHHCTTCT--TSCC-------EEEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHH----HHHHTCCCT
T ss_pred HHHHhCcccc--cccc-------eeEEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHH----HHHHHhccC
Confidence 4433311101 1121 12343321111334589999999999999999999999999744 455555555
Q ss_pred CCChhhH
Q 014843 263 FVDSYSL 269 (417)
Q Consensus 263 ~lsa~~L 269 (417)
...+..|
T Consensus 376 ~~~~~~l 382 (511)
T 2weu_A 376 RWDPVLI 382 (511)
T ss_dssp TCCHHHH
T ss_pred CCCHHHH
Confidence 4455555
No 16
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.43 E-value=5.3e-13 Score=132.11 Aligned_cols=202 Identities=16% Similarity=0.089 Sum_probs=122.1
Q ss_pred eccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchhhhhhhcCCCCC--cee
Q 014843 33 EFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQIRSGRKPD--GVC 110 (417)
Q Consensus 33 ~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spiarql~~g~~~~--~vc 110 (417)
..++|..|.+.|.+++.+.|++++.+++|++++. ++ .|++.+|++++|++||+|+|..|.+.++++...++. +.+
T Consensus 102 ~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~~~~~~~~~~~~ 178 (379)
T 3alj_A 102 RIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVGSKVRDSIGFKQDRWVSKDG 178 (379)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTTCHHHHHHCCCEEEEEEEEE
T ss_pred EEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCccHHHHHHhcCCCCcCcCCcE
Confidence 4589999999999999999999999999999987 55 787777889999999999999999999876432111 111
Q ss_pred eeeeeeeecC----CCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCCCCCCHHHHHHHHHHh
Q 014843 111 LVVGSCARGF----KDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEELLERYWDL 186 (417)
Q Consensus 111 ~~vg~~a~G~----~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~~~psL~~l~e~y~~~ 186 (417)
. ........ +..........+.-.. ..+++| .||.+++ ....++. ..........+.+.++++...
T Consensus 179 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~p~~~~--~~~~~~~-~~~~~~~~~~l~~~~~~~~~~ 248 (379)
T 3alj_A 179 L-IRLIVPRMKKELGHGEWDNTIDMWNFWP-----RVQRIL-YSPCNEN--ELYLGLM-APAADPRGSSVPIDLEVWVEM 248 (379)
T ss_dssp E-EEEEEECCHHHHCSSCTTSEEEEECCSS-----SCCEEE-EEECSSS--EEEEEEE-ECTTCTTTTCSSCCHHHHHHH
T ss_pred E-EEEEechhhccCCcCCcccccccceEEC-----CCCEEE-EEECCCC--cEEEEEE-ecCCCCCHHHHHHHHhcCCch
Confidence 1 11111110 1000111111000011 258899 8999875 2334333 222111111455556665544
Q ss_pred CC---c-ccCCCCCccceEEeeee--ecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHH
Q 014843 187 MP---E-YQGVTLDNLEIQRVIYG--IFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGV 255 (417)
Q Consensus 187 LP---~-y~g~~l~~~~~~~~~~G--~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI 255 (417)
+| + ....+..+.. ..+.+. ..+ +...+|++++||||..++|++|.|+..+++.+..|++.|
T Consensus 249 ~~~~~~~l~~~~~~~~~-~~~~~~~~~~~-------~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L 315 (379)
T 3alj_A 249 FPFLEPCLIEAAKLKTA-RYDKYETTKLD-------SWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDL 315 (379)
T ss_dssp CGGGHHHHHHHHTCTTC-CEEEEEEEEES-------CSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHT
T ss_pred hccHHHHHhhCCccceE-EecccccCCCC-------CcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHh
Confidence 43 1 1110001111 111111 122 234589999999999999999999999999966666555
No 17
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.40 E-value=8.5e-12 Score=133.44 Aligned_cols=238 Identities=16% Similarity=0.152 Sum_probs=141.1
Q ss_pred eccChHHHHHHHHHHHhhcCc--EEEcCceEEEEEEECC----eEEEEec------CC--cEEEEEEEEeccCCCchhhh
Q 014843 33 EFREPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN----AAVLLLA------EG--KILSSHLIIDAMGNFSPVVK 98 (417)
Q Consensus 33 ~~Vdr~~L~~~L~~ka~~~Gg--~i~~~t~v~~i~~~~d----~v~V~t~------~g--~~~~ARlVIDA~G~~Spiar 98 (417)
..+++..|.+.|.+++.+.|+ +|+.+++|++++.+++ +|+|++. +| ++++|++||+|||..|.+.+
T Consensus 136 ~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~ 215 (639)
T 2dkh_A 136 VILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRR 215 (639)
T ss_dssp EECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHH
T ss_pred EeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHH
Confidence 458999999999999999987 9999999999999874 5777653 45 47999999999999999999
Q ss_pred hhhcCC---CCCceeeeeeeeee-cCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeC--CC--
Q 014843 99 QIRSGR---KPDGVCLVVGSCAR-GFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYID--PQ-- 170 (417)
Q Consensus 99 ql~~g~---~~~~vc~~vg~~a~-G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~--~~-- 170 (417)
+++... .....+.++..... .+++.. ....+.. + .+++| .||..++ ....+++. ... ..
T Consensus 216 ~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~---~------~g~~~-~~P~~~~-~~~r~~~~-~~~~~~~~~ 282 (639)
T 2dkh_A 216 AIGRQLVGDSANQAWGVMDVLAVTDFPDVR-YKVAIQS---E------QGNVL-IIPREGG-HLVRFYVE-MDKLDADER 282 (639)
T ss_dssp HTTCCCEECSCSCCEEEEEEEEEECCTTTT-SEEEEEE---T------TEEEE-EEECTTS-SCEEEEEE-CC-------
T ss_pred HhCCCCCCCCccceEEEEEEEEccCCCccc-eeEEEEc---C------CceEE-EEEcCCC-cEEEEEEE-CCCcCcccc
Confidence 886542 12222222221111 222211 1111111 1 47888 7998764 12333332 221 11
Q ss_pred -CCC-CCHHHHHHHHHHhCCcccCCCCCccceEEeeeeecCC-------CCCCC-----CCCCCCCEEEEcCCCCCCCCc
Q 014843 171 -AGS-PKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPT-------YRDSP-----LPAAFNRILQFGDASGIQSPV 236 (417)
Q Consensus 171 -~~~-psL~~l~e~y~~~LP~y~g~~l~~~~~~~~~~G~~P~-------~~~~p-----~~~~~driLlvGDAAglvdPl 236 (417)
... .+.+++.+.+.+.+..+. .+++++.+. ..++. |...+ .....+||+++||||...+|+
T Consensus 283 ~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~ 357 (639)
T 2dkh_A 283 VASRNITVEQLIATAQRVLHPYK-LEVKNVPWW----SVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPK 357 (639)
T ss_dssp ----CCCHHHHHHHHHHHHTTSC-EEEEEEEEE----EEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGG
T ss_pred cccCCCCHHHHHHHHHHHhCccc-CcceeeeEE----EecccccchhhhhhccccccccccCccCcEEEEecccccCCCc
Confidence 111 267777666545443221 111222111 12222 21100 011278999999999999999
Q ss_pred cccchhHHHhhHHHHHHHHHHHHhCCCCChhhHhhhcCCCc--------cchHHHHHHhhcccc
Q 014843 237 SFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMP--------NLSASWLFQRAMSAK 292 (417)
Q Consensus 237 Sg~GfGs~lR~l~rla~gI~~AL~~~~lsa~~L~~l~~Yq~--------nl~~~~~lqk~M~~~ 292 (417)
.|.|+..++..+.-|+..|+.+++. ...++.| ..|+. .+..+..+.++|+.+
T Consensus 358 ~GqG~n~ai~DA~nLawkLa~vl~g-~a~~~lL---~~Ye~eR~~~a~~~~~~s~~~~~~~~~~ 417 (639)
T 2dkh_A 358 AGQGMNFSMQDSFNLGWKLAAVLRK-QCAPELL---HTYSSERQVVAQQLIDFDREWAKMFSDP 417 (639)
T ss_dssp GCCTTHHHHHHHHHHHHHHHHHHTT-SBCGGGG---HHHHHHHHHHHHHHHHHHHHSCC-----
T ss_pred ccccchhhHHHHHHHHHHHHHHHcC-CCcHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999998863 3334444 45552 233344444555544
No 18
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.40 E-value=3.5e-12 Score=133.71 Aligned_cols=212 Identities=10% Similarity=0.060 Sum_probs=124.7
Q ss_pred eeccChHHHHHHHHHHHhhc-CcEEEcCceEEEEEEECCe--EEEEecCCcEEEEEEEEeccCCCchhhh-hhhcCC-C-
Q 014843 32 LEFREPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENA--AVLLLAEGKILSSHLIIDAMGNFSPVVK-QIRSGR-K- 105 (417)
Q Consensus 32 ~~~Vdr~~L~~~L~~ka~~~-Gg~i~~~t~v~~i~~~~d~--v~V~t~~g~~~~ARlVIDA~G~~Spiar-ql~~g~-~- 105 (417)
...+++..|.+.|.+++.+. |++++.+ +|+++..++++ +.|++.+|++++|++||+|+|..|.+.+ .++.+. .
T Consensus 188 ~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~~~~~ 266 (550)
T 2e4g_A 188 AWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEPFLDM 266 (550)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCCEEEC
T ss_pred ceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCCcccc
Confidence 44599999999999999998 9999999 99999987766 5677777888999999999999999844 343321 0
Q ss_pred ----CCceeeeeeeeeecCC-CCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCCCCCCHHHHH
Q 014843 106 ----PDGVCLVVGSCARGFK-DNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEELL 180 (417)
Q Consensus 106 ----~~~vc~~vg~~a~G~~-d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~~~psL~~l~ 180 (417)
+...+.++.....+-. +.. ....... . ..+++| .+|..+ .....+.+... ..+-++..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~-----~~g~~~-~ipl~~----~~~~g~v~~~~---~~~~~~~~ 329 (550)
T 2e4g_A 267 SDHLLNDSAVATQVPHDDDANGVE-PFTSAIA---M-----KSGWTW-KIPMLG----RFGTGYVYSSR---FATEDEAV 329 (550)
T ss_dssp TTTCCCCEEEEEEEECCHHHHCCC-SSEEEEE---C-----SSEEEE-EEECSS----EEEEEEEECTT---TSCHHHHH
T ss_pred cccccccceEEEeecccCCcccCC-Cceeeee---c-----CCceEE-EccCCC----ccceEEEEecC---CCChHHHH
Confidence 1111111111111000 000 1111111 1 258899 799874 22222233221 12334444
Q ss_pred HHHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHh
Q 014843 181 ERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVR 260 (417)
Q Consensus 181 e~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~ 260 (417)
+.+.+.++.... +.+.... +.+.....+...+|++++||||+.++|++|.|+..++..+. .|+++|.
T Consensus 330 ~~l~~~~~~~p~--l~~~~~i-------~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~----~La~~L~ 396 (550)
T 2e4g_A 330 REFCEMWHLDPE--TQPLNRI-------RFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALY----QLVKHFP 396 (550)
T ss_dssp HHHHHHTTCCTT--TSCCEEE-------ECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHH----HHHHTCC
T ss_pred HHHHHhhCcCcc--cCCCceE-------EecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHH----HHHHhcc
Confidence 444443422211 2222222 22111111234589999999999999999999999999744 4455666
Q ss_pred CCCCChhhHhhhcCCCc
Q 014843 261 GDFVDSYSLSLLNPYMP 277 (417)
Q Consensus 261 ~~~lsa~~L~~l~~Yq~ 277 (417)
.+...+..| +.|+.
T Consensus 397 ~~~~~~~~l---~~Y~~ 410 (550)
T 2e4g_A 397 DKSLNPVLT---ARFNR 410 (550)
T ss_dssp CTTCCHHHH---HHHHH
T ss_pred ccCCCHHHH---HHHHH
Confidence 555444444 45554
No 19
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.36 E-value=4.2e-12 Score=132.31 Aligned_cols=207 Identities=12% Similarity=0.063 Sum_probs=123.2
Q ss_pred eeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCe--EEEEecCCcEEEEEEEEeccCCCchhhhh-hhcCC-CCC
Q 014843 32 LEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAEGKILSSHLIIDAMGNFSPVVKQ-IRSGR-KPD 107 (417)
Q Consensus 32 ~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~--v~V~t~~g~~~~ARlVIDA~G~~Spiarq-l~~g~-~~~ 107 (417)
...|+|..|.+.|.+++.+.|++++.+ +|+++...+++ +.|++.+|++++|++||+|+|..|.+.++ ++.+. ...
T Consensus 159 ~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~ 237 (538)
T 2aqj_A 159 AWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMS 237 (538)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECT
T ss_pred cEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCccccc
Confidence 345999999999999999999999999 89999987665 46777778789999999999999998544 33221 001
Q ss_pred c-----eeeeeeeeeecC-CCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCCCCCCHHHHHH
Q 014843 108 G-----VCLVVGSCARGF-KDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEELLE 181 (417)
Q Consensus 108 ~-----vc~~vg~~a~G~-~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~~~psL~~l~e 181 (417)
+ .+..+.....+- .+.. ....... . ..+++| .||..++ ..++. .+... ..+-++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~-----~~g~~~-~~p~~~~---~~~g~-v~~~~---~~~~~~~~~ 300 (538)
T 2aqj_A 238 DYLLCDSAVASAVPNDDARDGVE-PYTSSIA---M-----NSGWTW-KIPMLGR---FGSGY-VFSSH---FTSRDQATA 300 (538)
T ss_dssp TTCCCCEEEEEEEECCHHHHCCC-SSEEEEE---C-----SSEEEE-EEEETTE---EEEEE-EECTT---TSCHHHHHH
T ss_pred cccccceEEEEecccCCcccCCC-Cceeeee---c-----CCceEE-EecCCCc---eEEEE-EEcCC---CCChHHHHH
Confidence 1 111111110000 0000 0111111 1 258999 8998753 33322 23221 112333333
Q ss_pred HHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhC
Q 014843 182 RYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 261 (417)
Q Consensus 182 ~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~ 261 (417)
.+.+.++. ..+.+.. .+|.+.....+...+|++++||||+.++|++|.|+..++..+. .|+++|..
T Consensus 301 ~l~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~----~La~~L~~ 366 (538)
T 2aqj_A 301 DFLKLWGL---SDNQPLN-------QIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALY----QLVKHFPD 366 (538)
T ss_dssp HHHHHHTC---CTTCCCE-------EEECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHH----HHHHTCCB
T ss_pred HHHHHhcC---CCCCCce-------EEeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHH----HHHHHhhc
Confidence 33333321 1111211 2233321122455799999999999999999999999999744 45556665
Q ss_pred CCCChhhHh
Q 014843 262 DFVDSYSLS 270 (417)
Q Consensus 262 ~~lsa~~L~ 270 (417)
+...++.|+
T Consensus 367 ~~~~~~~l~ 375 (538)
T 2aqj_A 367 TSFDPRLSD 375 (538)
T ss_dssp TTCCHHHHH
T ss_pred cCCCHHHHH
Confidence 555555553
No 20
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.34 E-value=1.8e-12 Score=134.94 Aligned_cols=200 Identities=15% Similarity=0.163 Sum_probs=116.5
Q ss_pred eeccChHHHHHHHHHHHhh-cCcEEEcCceEEEEEEECCeE--EEEecCCcEEEEEEEEeccCCCchh-hhhhhcCCC--
Q 014843 32 LEFREPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA--VLLLAEGKILSSHLIIDAMGNFSPV-VKQIRSGRK-- 105 (417)
Q Consensus 32 ~~~Vdr~~L~~~L~~ka~~-~Gg~i~~~t~v~~i~~~~d~v--~V~t~~g~~~~ARlVIDA~G~~Spi-arql~~g~~-- 105 (417)
...++|..|.+.|.+++.+ .|++++.+ +|++++.+++++ .|++.+|++++|++||+|+|..|.+ .+.++....
T Consensus 169 ~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~~~~ 247 (526)
T 2pyx_A 169 GYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPFLSQ 247 (526)
T ss_dssp EEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCCEEEC
T ss_pred eEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCcccc
Confidence 3459999999999999999 89999999 599999876654 5666677789999999999999998 555543220
Q ss_pred ----CCceeeeeeeeeecCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCCCCCCHHHHHH
Q 014843 106 ----PDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEELLE 181 (417)
Q Consensus 106 ----~~~vc~~vg~~a~G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~~~psL~~l~e 181 (417)
+...+..+.....+............. . ..+++| .||..++ ..++ +.+...........+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~g~~~-~~pl~~~---~~~~-~v~~~~~~~~~~~~~~l~ 314 (526)
T 2pyx_A 248 KSVLFNDRALAIQVPYSDANSPIASCTHSTA---Q-----PNGWIW-DIGLPTR---KGVG-YVYSSSHTNDIDAQKTLF 314 (526)
T ss_dssp HHHHCCCEEEEEEEECSSTTCCCCSSEEEEE---E-----TTEEEE-EEECSSE---EEEE-EEECTTTCCHHHHHHHHH
T ss_pred cccccCccEEEEEeeccCCCCCCCCceeEEe---c-----CCCeEE-EeeCCCc---eEEE-EEecCCCCChHHHHHHHH
Confidence 011111111111110000001111111 1 257999 7998753 2222 222221111113444555
Q ss_pred HHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHH
Q 014843 182 RYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTG 254 (417)
Q Consensus 182 ~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~g 254 (417)
++++.. +..++..+. ..+|.+.....+...+|++++||||+.++|++|.|+..++..+..|++.
T Consensus 315 ~~l~~~----~~~l~~~~~-----~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~ 378 (526)
T 2pyx_A 315 NYLGVD----GAAADKLEP-----RQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQ 378 (526)
T ss_dssp HHHTCC----HHHHHHCCC-----EEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHhc----CcccccCCc-----eEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHH
Confidence 555321 111111111 1222221111234468999999999999999999999999985555443
No 21
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.34 E-value=1.8e-11 Score=131.90 Aligned_cols=240 Identities=13% Similarity=0.088 Sum_probs=148.3
Q ss_pred eccChHHHHHHHHHHHhhcC---cEEEcCceEEEEEEEC--------CeEEEEec-------------------------
Q 014843 33 EFREPAKLIEIVKKRFISLG---GVIFEGYSVSSICTYE--------NAAVLLLA------------------------- 76 (417)
Q Consensus 33 ~~Vdr~~L~~~L~~ka~~~G---g~i~~~t~v~~i~~~~--------d~v~V~t~------------------------- 76 (417)
..+++..|.+.|.+++.+.| ++|..++++++++.++ ++|+|+..
T Consensus 114 ~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l 193 (665)
T 1pn0_A 114 VVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNL 193 (665)
T ss_dssp EECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHH
T ss_pred EEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEecccccccccccccccccccccccc
Confidence 34899999999999999877 7999999999999876 46777542
Q ss_pred -----------------CC--cEEEEEEEEeccCCCchhhhhhhcCCCCC---ceeeeeeeee-ecCCCCCcceEEEecc
Q 014843 77 -----------------EG--KILSSHLIIDAMGNFSPVVKQIRSGRKPD---GVCLVVGSCA-RGFKDNSTSDVIYSSS 133 (417)
Q Consensus 77 -----------------~g--~~~~ARlVIDA~G~~Spiarql~~g~~~~---~vc~~vg~~a-~G~~d~~~gei~fs~~ 133 (417)
+| ++++|++||+|||.+|.+.++++...+.. ..+.++.... ..+++... .. +.+.
T Consensus 194 ~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~~~~~v~d~~~~~~~p~~~~-~~-~~~~ 271 (665)
T 1pn0_A 194 QTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTDYIWGVLDAVPASNFPDIRS-RC-AIHS 271 (665)
T ss_dssp HHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEEEEEEEEEEEEECCCTTTTS-EE-EEEC
T ss_pred cccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCccEEEEEEEEEECCCCCCcce-EE-EEEe
Confidence 34 47999999999999999999986543211 1111111111 12222111 11 1110
Q ss_pred cccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCC------CCC-CCHHHHHHHHHHhCCcccCCCCCccceEEeeee
Q 014843 134 SVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQ------AGS-PKLEELLERYWDLMPEYQGVTLDNLEIQRVIYG 206 (417)
Q Consensus 134 ~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~------~~~-psL~~l~e~y~~~LP~y~g~~l~~~~~~~~~~G 206 (417)
. ..+++| .+|.+++ ....++.. .... ... .+.+++.+.+.+.+..|. .+++.+.+. .
T Consensus 272 --~-----~~g~~~-~~P~~~~--~~r~~~~~-~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~-~~~~~~~~~----~ 335 (665)
T 1pn0_A 272 --A-----ESGSIM-IIPRENN--LVRFYVQL-QARAEKGGRVDRTKFTPEVVIANAKKIFHPYT-FDVQQLDWF----T 335 (665)
T ss_dssp --S-----SSCEEE-EEECSTT--CEEEEEEE-CC----------CCCCHHHHHHHHHHHHTTSC-CEEEEEEEE----E
T ss_pred --C-----CCceEE-EEEcCCC--EEEEEEEe-CCccccccccCcCCCCHHHHHHHHHHHhCccc-CceeeEEEE----E
Confidence 0 147788 7898865 24444432 2211 111 267777766655543222 112222111 2
Q ss_pred ecCCCCCCCCCCC-CCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhCCCCChhhHhhhcCCC--------c
Q 014843 207 IFPTYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM--------P 277 (417)
Q Consensus 207 ~~P~~~~~p~~~~-~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~~~lsa~~L~~l~~Yq--------~ 277 (417)
.+|.......+.. .+||+++||||...+|+.|-|+..+++.+.-|+..|+.+++. ...++.| ..|+ .
T Consensus 336 ~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g-~a~~~lL---~tYe~eR~p~a~~ 411 (665)
T 1pn0_A 336 AYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTG-RAKRDIL---KTYEEERQPFAQA 411 (665)
T ss_dssp EEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTT-CBCGGGG---HHHHHHHHHHHHH
T ss_pred eeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcC-CCcHHHH---HHHHHHHHHHHHH
Confidence 2222110111334 589999999999999999999999999999999999998863 3344444 4454 3
Q ss_pred cchHHHHHHhhcccccC
Q 014843 278 NLSASWLFQRAMSAKQQ 294 (417)
Q Consensus 278 nl~~~~~lqk~M~~~~~ 294 (417)
.+..+..+.++|+.++.
T Consensus 412 ~i~~s~~~~~l~~~~~~ 428 (665)
T 1pn0_A 412 LIDFDHQFSRLFSGRPA 428 (665)
T ss_dssp HHHHHHHHHHHHHSCBC
T ss_pred HHHHHHHHHHHhcCCCc
Confidence 45556667778876543
No 22
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.31 E-value=2.1e-11 Score=121.97 Aligned_cols=208 Identities=18% Similarity=0.219 Sum_probs=121.6
Q ss_pred eccChHHHHHHHHHHHhh-cCc-EEEcCceEEEEEEECCeEEEEecC---C--cEEEEEEEEeccCCCchhhhhhhcCCC
Q 014843 33 EFREPAKLIEIVKKRFIS-LGG-VIFEGYSVSSICTYENAAVLLLAE---G--KILSSHLIIDAMGNFSPVVKQIRSGRK 105 (417)
Q Consensus 33 ~~Vdr~~L~~~L~~ka~~-~Gg-~i~~~t~v~~i~~~~d~v~V~t~~---g--~~~~ARlVIDA~G~~Spiarql~~g~~ 105 (417)
..++|..|++.|.+++.+ .|+ +++.+++|++++. +++|+|++.+ | .+++|++||+|||..|.+.+++.....
T Consensus 102 ~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~ 180 (410)
T 3c96_A 102 YSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRAHLHPDQR 180 (410)
T ss_dssp EEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTCHHHHHHCTTCC
T ss_pred eeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccchhHHHhcCCCC
Confidence 358999999999999987 475 8999999999998 7888887654 6 589999999999999999998864432
Q ss_pred CCceeeeeeeeeecCC---CCCcceEEEecccccccCCCCCceeeeecCCCC-----CCCCceEEEEEe-eCC------C
Q 014843 106 PDGVCLVVGSCARGFK---DNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGS-----GPLDRTTYMFTY-IDP------Q 170 (417)
Q Consensus 106 ~~~vc~~vg~~a~G~~---d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~d-----g~~e~ttyLf~y-~~~------~ 170 (417)
....... .+..++. ....+...+.+++. ..+++| .||.++ + ...++.... ... .
T Consensus 181 ~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~p~~~~~~~~g--~~~~~w~~~~~~~~~~~~~~ 249 (410)
T 3c96_A 181 PLSHGGI--TMWRGVTEFDRFLDGKTMIVANDE------HWSRLV-AYPISARHAAEG--KSLVNWVCMVPSAAVGQLDN 249 (410)
T ss_dssp CCEEEEE--EEEEEEEEESCCTTSSEEEEEECT------TCCEEE-EEECCHHHHTTT--CEEEEEEEEEEHHHHCCCCS
T ss_pred CCCcCCe--eEEEeecccccccCCCeEEEecCC------CCcEEE-EEecCCcccCCC--CcEEEEEEEecCcccccCCC
Confidence 2211110 1111111 11112222222221 146777 788752 3 122222222 110 0
Q ss_pred C---CCC-CHHHHHHHHHHhCCcc---cCCCCCccceEEeeeeecCCCCCCC-CCCCCCCEEEEcCCCCCCCCccccchh
Q 014843 171 A---GSP-KLEELLERYWDLMPEY---QGVTLDNLEIQRVIYGIFPTYRDSP-LPAAFNRILQFGDASGIQSPVSFGGFG 242 (417)
Q Consensus 171 ~---~~p-sL~~l~e~y~~~LP~y---~g~~l~~~~~~~~~~G~~P~~~~~p-~~~~~driLlvGDAAglvdPlSg~GfG 242 (417)
. ..+ +.+++.+.+-..-+.. ..+ ++...-. ..+|.....+ .+...+||+++||||...+|++|.|+.
T Consensus 250 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-i~~~~~~----~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n 324 (410)
T 3c96_A 250 EADWNRDGRLEDVLPFFADWDLGWFDIRDL-LTRNQLI----LQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGAS 324 (410)
T ss_dssp SCCTTCBCCHHHHHHHHTTCCBTTBCHHHH-HHTCSEE----EEEEEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHH
T ss_pred ccccCCCCCHHHHHHHhcCCCCchhHHHHH-HhcCccc----ceeecccCCCccccccCCEEEEecccCCCCCccchhHH
Confidence 1 112 4555554432111100 000 0111000 1123221111 134468999999999999999999999
Q ss_pred HHHhhHHHHHHHHHH
Q 014843 243 SLTRHLGRLSTGVYE 257 (417)
Q Consensus 243 s~lR~l~rla~gI~~ 257 (417)
.+++.+..|++.|..
T Consensus 325 ~ai~Da~~La~~L~~ 339 (410)
T 3c96_A 325 QAILDGIELAAALAR 339 (410)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 999997778777764
No 23
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.26 E-value=1.8e-10 Score=120.77 Aligned_cols=205 Identities=14% Similarity=0.072 Sum_probs=125.2
Q ss_pred eccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecC---C--cEEEEEEEEeccCCCchhhhhhhcCCCC-
Q 014843 33 EFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE---G--KILSSHLIIDAMGNFSPVVKQIRSGRKP- 106 (417)
Q Consensus 33 ~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~---g--~~~~ARlVIDA~G~~Spiarql~~g~~~- 106 (417)
..+++..|.+.|.+++.+. |+.+++|++++.++++|+|++.+ | .+++|++||+|||..|.+.++++...+.
T Consensus 133 ~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~ 209 (549)
T 2r0c_A 133 AICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSPTRKALGIDAPPR 209 (549)
T ss_dssp EECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBS
T ss_pred cccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCC
Confidence 4589999999999999886 99999999999999999887654 5 4799999999999999999988654321
Q ss_pred --CceeeeeeeeeecCC---CCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCCCCC-CHHHHH
Q 014843 107 --DGVCLVVGSCARGFK---DNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSP-KLEELL 180 (417)
Q Consensus 107 --~~vc~~vg~~a~G~~---d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~~~p-sL~~l~ 180 (417)
...+..+......+. ....+..++.+.+ +.+.+| .+|..++ .....++ ..+.....+ .+.+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~-~~p~~~~-~~~~~~~--~~~~~~~~~~~~~~~l 278 (549)
T 2r0c_A 210 HRTQVFRNILFRAPELRSLLGERAALFFFLMLS-------SSLRFP-LRALDGR-GLYRLTV--GVDDASKSTMDSFELV 278 (549)
T ss_dssp SCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEE-------TTEEEE-EEESSSS-SEEEEEE--ECSTTCCSCCCHHHHH
T ss_pred cccceEEEEEEECCchHHhcCCCCceEEEEECC-------CCcEEE-EEEECCC-cEEEEEe--cCCCCCCCHHHHHHHH
Confidence 111111111000110 0001112222111 114566 6777532 1122222 111111112 455555
Q ss_pred HHHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHh
Q 014843 181 ERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVR 260 (417)
Q Consensus 181 e~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~ 260 (417)
++++. . .+. .++... ..++.......+...+||+++||||...+|+.|.|+..+++.+.-|+..|+.+++
T Consensus 279 ~~~~~---~--~~~---~~~~~~--~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~ 348 (549)
T 2r0c_A 279 RRAVA---F--DTE---IEVLSD--SEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLR 348 (549)
T ss_dssp HHHBC---S--CCC---CEEEEE--EEEEECCEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhC---C--CCc---eeEEEE--ecchhHhhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHc
Confidence 55432 1 111 122221 2233221112234568999999999999999999999999999999999999886
Q ss_pred C
Q 014843 261 G 261 (417)
Q Consensus 261 ~ 261 (417)
.
T Consensus 349 g 349 (549)
T 2r0c_A 349 G 349 (549)
T ss_dssp T
T ss_pred C
Confidence 4
No 24
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.21 E-value=6.2e-11 Score=118.17 Aligned_cols=203 Identities=14% Similarity=0.093 Sum_probs=118.2
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchhhhhhhcCCCCC--ceee
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQIRSGRKPD--GVCL 111 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spiarql~~g~~~~--~vc~ 111 (417)
.++|..|.+.|.+++.+ ++|+.+++|++++.++++|+|++.+|++++|++||+|||..|.+.+++.... +. +.+.
T Consensus 124 ~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vR~~l~~~~-~~~~g~~~ 200 (398)
T 2xdo_A 124 EINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSKVRKFVTDTE-VEETGTFN 200 (398)
T ss_dssp EECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCSCCTTTCCCC-CEEEEEEE
T ss_pred eECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchhHHhhccCCC-ceEcceEE
Confidence 48999999999988754 6899999999999999999999888889999999999999999999875322 21 1111
Q ss_pred eeeeeeecCC--CC------CcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCC-C----C-CCHH
Q 014843 112 VVGSCARGFK--DN------STSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQA-G----S-PKLE 177 (417)
Q Consensus 112 ~vg~~a~G~~--d~------~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~-~----~-psL~ 177 (417)
+........ .. ..+.+ +..++ ...++ .+|.+++ ...+++........ . . .+.+
T Consensus 201 -~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~--------~~~~~-~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (398)
T 2xdo_A 201 -IQADIHQPEINCPGFFQLCNGNRL-MASHQ--------GNLLF-ANPNNNG--ALHFGISFKTPDEWKNQTQVDFQNRN 267 (398)
T ss_dssp -EEEEESSHHHHSHHHHHHHTTSEE-EEEET--------TEEEE-EEEEETT--EEEEEEEEECCTTC---CCSCTTCHH
T ss_pred -EEEEeCchhccCchhHhhcCCceE-EEecC--------CCeEE-EEeCCCC--cEEEEEEEecCcccccccccCcCCHH
Confidence 111111000 00 01111 11111 12333 4576654 24444432222111 1 1 1344
Q ss_pred HHHHHHHHhCCccc----CC-C-CCccceEEeeeeecCCCCCCCCCCCCC--CEEEEcCCCCCCCCccccchhHHHhhHH
Q 014843 178 ELLERYWDLMPEYQ----GV-T-LDNLEIQRVIYGIFPTYRDSPLPAAFN--RILQFGDASGIQSPVSFGGFGSLTRHLG 249 (417)
Q Consensus 178 ~l~e~y~~~LP~y~----g~-~-l~~~~~~~~~~G~~P~~~~~p~~~~~d--riLlvGDAAglvdPlSg~GfGs~lR~l~ 249 (417)
+..+.+.+.++.+. .. + .+.+ ..... ..+|.- +.-...+ |++++||||...+|++|.|+..+++.+.
T Consensus 268 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~---~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~ 342 (398)
T 2xdo_A 268 SVVDFLLKEFSDWDERYKELIHTTLSF-VGLAT-RIFPLE---KPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDAL 342 (398)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHCSCC-EEEEE-EECCCC---SCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHHHHHhCcccc-eeeee-EeccCC---CCcccCCCccEEEEeehhccCCCccCccHHHHHHHHH
Confidence 44444444443211 00 0 0111 11111 223321 1111224 8999999999999999999999999977
Q ss_pred HHHHHHHH
Q 014843 250 RLSTGVYE 257 (417)
Q Consensus 250 rla~gI~~ 257 (417)
.|++.|..
T Consensus 343 ~La~~L~~ 350 (398)
T 2xdo_A 343 ILSDNLAD 350 (398)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHh
Confidence 77777754
No 25
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.19 E-value=4.5e-10 Score=110.01 Aligned_cols=223 Identities=17% Similarity=0.186 Sum_probs=121.2
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECC-eEEEEecCCcEEEEEEEEeccCCCchhhhhhhcCCCCC--cee
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFSPVVKQIRSGRKPD--GVC 110 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d-~v~V~t~~g~~~~ARlVIDA~G~~Spiarql~~g~~~~--~vc 110 (417)
.|+|..|.+.|.+.+ +..|..++++++++..++ +++|++.+|++++|++||+|||.+|.+.+++....++. +..
T Consensus 108 ~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~ 184 (412)
T 4hb9_A 108 SISRTELKEILNKGL---ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSKVRKQYLPFIERFDVGVS 184 (412)
T ss_dssp EEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCHHHHHHSTTCCCEEEEEE
T ss_pred EeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcchHHHhCCCcccccccee
Confidence 378899999887654 457899999999988766 58899889999999999999999999999986554332 111
Q ss_pred eeeeeee-e---------cCCCCCcceEEEecccccccCCCCCc--eeeeecCCCCC-------CCCceEEEEEeeC-CC
Q 014843 111 LVVGSCA-R---------GFKDNSTSDVIYSSSSVKKVGDSEVQ--LFWEAFPAGSG-------PLDRTTYMFTYID-PQ 170 (417)
Q Consensus 111 ~~vg~~a-~---------G~~d~~~gei~fs~~~v~~~~~~~~q--y~We~FP~~dg-------~~e~ttyLf~y~~-~~ 170 (417)
...+.+. . .+.+..... .-+..+ ... .+| ..|.... ......+++.... ..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (412)
T 4hb9_A 185 MIIGRARLTPALTALLPQNFRDGTPNS----IVPKSP----DWLFISMW-RAPVNIHVEASLAEIDNFIVWVYVAATDSL 255 (412)
T ss_dssp EEEEEEECCHHHHHHSCGGGTSSCCEE----ECCSSS----EEEEEEEE-EEESCTTSCGGGCCEEEEEEEEEEEEGGGS
T ss_pred EEEEEEecchhhhcchhhhhccCCcce----EeecCC----Ccceeeee-ecCCceeEEEeccCCCceEEEEEecccccc
Confidence 1111110 0 000000000 001110 001 112 1121110 0012222222221 11
Q ss_pred CCC---CCHHHHHHHHHHhCCc----cc----CCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCcccc
Q 014843 171 AGS---PKLEELLERYWDLMPE----YQ----GVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFG 239 (417)
Q Consensus 171 ~~~---psL~~l~e~y~~~LP~----y~----g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~ 239 (417)
+.. .+.+.+.+.+.+.+.. .+ ..+.... ..... ...|. ..+...+||+++||||...+|+.|-
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~-~~~~~-~~~~~----~~~~~~grv~LiGDAAH~~~P~~Gq 329 (412)
T 4hb9_A 256 PDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENI-SPLHL-RSMPH----LLPWKSSTVTLLGDAIHNMTPMTGS 329 (412)
T ss_dssp CTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCC-EEEEE-EECCC----CCCCCCCSEEECTHHHHCSSCCSSS
T ss_pred cccccccchHHHHHHHHHHhccCChHHHHHHHhccccee-ccchh-ccccc----cccccccCEEEEEcccccCCCchhh
Confidence 111 1333333333333211 11 1111111 01001 01111 1134568999999999999999999
Q ss_pred chhHHHhhHHHHHHHHHHHHhCCCCChhhHhhhcCCCc
Q 014843 240 GFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYMP 277 (417)
Q Consensus 240 GfGs~lR~l~rla~gI~~AL~~~~lsa~~L~~l~~Yq~ 277 (417)
|...++..+.-|++.|+.++....--+++| +.|+.
T Consensus 330 G~n~ai~DA~~La~~L~~~~~~~~~~~~aL---~~Ye~ 364 (412)
T 4hb9_A 330 GANTALRDALLLTQKLASVASGHEELVKAI---SDYEQ 364 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSCHHHHH---HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcCHHHHH---HHHHH
Confidence 999999999999999998887543224444 55653
No 26
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.18 E-value=1.5e-10 Score=115.39 Aligned_cols=67 Identities=13% Similarity=0.120 Sum_probs=60.5
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchhhhhhhcCC
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQIRSGR 104 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spiarql~~g~ 104 (417)
+++..|.+.|.+.+ .|++++.+++|++++.++++|+|++.+|++++|++||+|||.+|.+.++++ ..
T Consensus 96 ~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vr~~~~-~~ 162 (397)
T 2vou_A 96 TSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVVRKRLL-GI 162 (397)
T ss_dssp EEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCHHHHHHH-CC
T ss_pred cCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchhHHHHhc-cC
Confidence 66788999998876 578999999999999999999999888889999999999999999999988 44
No 27
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.93 E-value=1.9e-09 Score=106.97 Aligned_cols=194 Identities=11% Similarity=0.024 Sum_probs=109.9
Q ss_pred eccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchhhhhhhc--CCCCCcee
Q 014843 33 EFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQIRS--GRKPDGVC 110 (417)
Q Consensus 33 ~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spiarql~~--g~~~~~vc 110 (417)
..++|..|++.|.+++.+.|++++.+++|++++.. .+++|++||+|||.+|. .+++.. +.+....
T Consensus 93 ~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~- 159 (381)
T 3c4a_A 93 CGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNHK-TAHFTEALVPQVDYG- 159 (381)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGGG-TCCSSGGGCCCCEEE-
T ss_pred eeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCch-HHhhhhhcCCCcccC-
Confidence 35899999999999999999999999999887531 12578999999999999 666532 2222111
Q ss_pred eeeeeeeecCCCC-CcceEEEecccccccCCCCCceeee-ecCCCCCCCCceEEEEEeeCC-----CCCCCCHHH---HH
Q 014843 111 LVVGSCARGFKDN-STSDVIYSSSSVKKVGDSEVQLFWE-AFPAGSGPLDRTTYMFTYIDP-----QAGSPKLEE---LL 180 (417)
Q Consensus 111 ~~vg~~a~G~~d~-~~gei~fs~~~v~~~~~~~~qy~We-~FP~~dg~~e~ttyLf~y~~~-----~~~~psL~~---l~ 180 (417)
....+..|.... +...+.+.+. ..+++|. .||-+++ ...+.....+. .....+.++ .+
T Consensus 160 -~~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 227 (381)
T 3c4a_A 160 -RNKYIWYGTSQLFDQMNLVFRTH--------GKDIFIAHAYKYSDT---MSTFIVECSEETYARARLGEMSEEASAEYV 227 (381)
T ss_dssp -EEEEEEEEESSCCSSEEEEEEEE--------TTEEEEEEEEECSSS---CEEEEEEECHHHHHHTTSSSSCHHHHHHHH
T ss_pred -CccEEEEecCCCCCcceeeEeeC--------CCcEEEEEEEEecCC---eEEEEEECCccccccCCcccCChHHHHHHH
Confidence 111122233211 1112222221 2466652 5898765 22333322211 111112223 33
Q ss_pred HHHHHh-CCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHH
Q 014843 181 ERYWDL-MPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEA 258 (417)
Q Consensus 181 e~y~~~-LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~A 258 (417)
.+++.. .|..+-+ ++..+..+.+...| ..+.+.+|++++||||..++|++|.|+..+++.+.-||+.|..+
T Consensus 228 ~~~~~~~~~~~~l~--~~~~~~~~~~~~~~-----~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~ 299 (381)
T 3c4a_A 228 AKVFQAELGGHGLV--SQPGLGWRNFMTLS-----HDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE 299 (381)
T ss_dssp HHHTHHHHTTCCCB--CCTTTCSEEEEECC-----CSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhcccCCCchhh--cCCCcceeeecccc-----CCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc
Confidence 333332 2221111 11100001111111 11344589999999999999999999999999988888887653
No 28
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.59 E-value=6.6e-07 Score=87.38 Aligned_cols=194 Identities=19% Similarity=0.209 Sum_probs=118.2
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch-hhhhhhcCCCCCceeee
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP-VVKQIRSGRKPDGVCLV 112 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp-iarql~~g~~~~~vc~~ 112 (417)
.+++.++.+.|.+++.+.|++++.+++|++++.++++|.|++.+| +++|+.||.|+|..|+ +.++++...+ +.++
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~~---~~~~ 235 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNA---FLPV 235 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCCC---CEEE
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCCc---eecc
Confidence 488999999999999999999999999999999888888888656 8999999999999887 7666543221 2222
Q ss_pred eeeeee-cCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCCC--CCC---CHHHHHHHHHHh
Q 014843 113 VGSCAR-GFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQA--GSP---KLEELLERYWDL 186 (417)
Q Consensus 113 vg~~a~-G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~~--~~p---sL~~l~e~y~~~ 186 (417)
-+++.. .........+++ . .++| .+|..++ .+.++...+... ..+ ..+.+.+.+.+.
T Consensus 236 ~g~~~~~~~~~~~~~~~~~------~------~~~~-~~p~~~g----~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~ 298 (382)
T 1ryi_A 236 KGECLSVWNDDIPLTKTLY------H------DHCY-IVPRKSG----RLVVGATMKPGDWSETPDLGGLESVMKKAKTM 298 (382)
T ss_dssp EEEEEEEECCSSCCCSEEE------E------TTEE-EEECTTS----EEEEECCCEETCCCCSCCHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCccceEE------c------CCEE-EEEcCCC----eEEEeecccccCCCCCCCHHHHHHHHHHHHHh
Confidence 232221 110100111111 1 2567 7898764 223332221111 112 355677777777
Q ss_pred CCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCC-----CCCCCccccchhHHHhhHHHHHHHHHHHHhC
Q 014843 187 MPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDAS-----GIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 261 (417)
Q Consensus 187 LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAA-----glvdPlSg~GfGs~lR~l~rla~gI~~AL~~ 261 (417)
+|..+.. ++.+.-.|..|.- .|+...+|++. ....+++|.||..+.. +++.+++.+..
T Consensus 299 ~p~l~~~-----~~~~~w~g~~~~t--------~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~----~g~~la~~i~~ 361 (382)
T 1ryi_A 299 LPAIQNM-----KVDRFWAGLRPGT--------KDGKPYIGRHPEDSRILFAAGHFRNGILLAPA----TGALISDLIMN 361 (382)
T ss_dssp CGGGGGS-----EEEEEEEEEEEEC--------SSSCCEEEEETTEEEEEEEECCSSCTTTTHHH----HHHHHHHHHTT
T ss_pred CCCcCCC-----ceeeEEEEecccC--------CCCCcEeccCCCcCCEEEEEcCCcchHHHhHH----HHHHHHHHHhC
Confidence 8865432 3344334555541 24455567654 2245677777766555 56666666666
Q ss_pred CCCC
Q 014843 262 DFVD 265 (417)
Q Consensus 262 ~~ls 265 (417)
+...
T Consensus 362 ~~~~ 365 (382)
T 1ryi_A 362 KEVN 365 (382)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 5443
No 29
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.41 E-value=1.1e-05 Score=77.13 Aligned_cols=188 Identities=14% Similarity=0.038 Sum_probs=99.5
Q ss_pred CcEEEcCceEEEEEEECCeEEEEecCCcEE-EEEEEEeccCCCchhhhhhhc-------CCCCCceeeeeeeeee-cCCC
Q 014843 52 GGVIFEGYSVSSICTYENAAVLLLAEGKIL-SSHLIIDAMGNFSPVVKQIRS-------GRKPDGVCLVVGSCAR-GFKD 122 (417)
Q Consensus 52 Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~-~ARlVIDA~G~~Spiarql~~-------g~~~~~vc~~vg~~a~-G~~d 122 (417)
|.+|+.+++|++++.++++|.|++.+|+.+ ++++||.|+|..|........ ..-+-..|.++..... .+ .
T Consensus 119 g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~ 197 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETPL-Q 197 (336)
T ss_dssp TCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSCC-S
T ss_pred cCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCCC-C
Confidence 789999999999999999999998888766 499999999998765432110 1111112222211111 11 1
Q ss_pred CCcceEEEecccccccCCCCCceeeeec-----CCCCCCCCceEEEEEee----CCCCCCCCHHHHHHHHHHhCCcccCC
Q 014843 123 NSTSDVIYSSSSVKKVGDSEVQLFWEAF-----PAGSGPLDRTTYMFTYI----DPQAGSPKLEELLERYWDLMPEYQGV 193 (417)
Q Consensus 123 ~~~gei~fs~~~v~~~~~~~~qy~We~F-----P~~dg~~e~ttyLf~y~----~~~~~~psL~~l~e~y~~~LP~y~g~ 193 (417)
.....+.... +...| .| |..++ .....+.+.. +..... +-+++.++..+.+...-|.
T Consensus 198 ~~~~~~~~~~----------~~~~~-l~~~~~~p~~~~--~~~~~v~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~lg~ 263 (336)
T 1yvv_A 198 TPMQGCFVQD----------SPLDW-LARNRSKPERDD--TLDTWILHATSQWSRQNLDA-SREQVIEHLHGAFAELIDC 263 (336)
T ss_dssp CCCCEEEECS----------SSEEE-EEEGGGSTTCCC--SSEEEEEEECHHHHHHTTTS-CHHHHHHHHHHHHHTTCSS
T ss_pred CCCCeEEeCC----------CceeE-EEecCcCCCCCC--CCcEEEEEeCHHHHHHHHhC-CHHHHHHHHHHHHHHHhCC
Confidence 1111211111 22344 32 54432 1123333222 001111 3334443333322211132
Q ss_pred CCC---ccceEEeeeeecCCCCCCCCC--CCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhC
Q 014843 194 TLD---NLEIQRVIYGIFPTYRDSPLP--AAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 261 (417)
Q Consensus 194 ~l~---~~~~~~~~~G~~P~~~~~p~~--~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~ 261 (417)
+.. .....+-.+ .+|.+...+.. ...+|+.++|||+ ++.|+..+++++-++|+.|.+.+..
T Consensus 264 ~~~~p~~~~~~rw~~-a~~~~~~~~~~~~~~~~rl~laGDa~------~g~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 264 TMPAPVFSLAHRWLY-ARPAGAHEWGALSDADLGIYVCGDWC------LSGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp CCCCCSEEEEEEEEE-EEESSCCCCSCEEETTTTEEECCGGG------TTSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCcEEEccccCc-cCCCCCCCCCeeecCCCCEEEEecCC------CCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 221 122233332 24555422211 2448999999999 3569999999999999999888754
No 30
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.38 E-value=1.4e-05 Score=78.41 Aligned_cols=195 Identities=14% Similarity=0.092 Sum_probs=112.6
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCe-EEEEecCCcEEEEEEEEeccCCCch-hhhhhhcCCCCCceee
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNFSP-VVKQIRSGRKPDGVCL 111 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~-v~V~t~~g~~~~ARlVIDA~G~~Sp-iarql~~g~~~~~vc~ 111 (417)
.+++.++.+.|.+++.+.|++++.+++|+++..+++. +.|++.+| +++|+.||.|+|..|+ +.++++...+. .+
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~~---~~ 245 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELPI---QS 245 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCCE---EE
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCCc---cc
Confidence 3678899999999999999999999999999988775 55777666 7999999999999984 55554433221 12
Q ss_pred eeeeee--ecCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeC-CCC----CCC-CHHHHHHHH
Q 014843 112 VVGSCA--RGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYID-PQA----GSP-KLEELLERY 183 (417)
Q Consensus 112 ~vg~~a--~G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~-~~~----~~p-sL~~l~e~y 183 (417)
.-+++. +..... ...++.+ ...++| ..|..++ . +.++...+ ... ..+ ..+.+.+..
T Consensus 246 ~~~~~~~~~~~~~~-~~~~~~~----------~~~~~y-~~p~~~g---~-~~ig~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (405)
T 2gag_B 246 HPLQALVSELFEPV-HPTVVMS----------NHIHVY-VSQAHKG---E-LVMGAGIDSYNGYGQRGAFHVIQEQMAAA 309 (405)
T ss_dssp EEEEEEEEEEBCSC-CCSEEEE----------TTTTEE-EEECTTS---E-EEEEEEECSSCCCSSCCCTHHHHHHHHHH
T ss_pred cceeEEEecCCccc-cCceEEe----------CCCcEE-EEEcCCC---c-EEEEeccCCCCccccCCCHHHHHHHHHHH
Confidence 222211 111110 1111111 124556 5786654 2 23333222 111 112 355666666
Q ss_pred HHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchh-HHHhhHHHHHHHHHHHHhCC
Q 014843 184 WDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFG-SLTRHLGRLSTGVYEAVRGD 262 (417)
Q Consensus 184 ~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfG-s~lR~l~rla~gI~~AL~~~ 262 (417)
.+.+|..+.. ++.+.-.|..|. ..|+...+|++. .-+-+..+|++ .-+..++.+++.+++.+..+
T Consensus 310 ~~~~p~l~~~-----~~~~~w~g~~~~--------t~d~~p~ig~~~-~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g~ 375 (405)
T 2gag_B 310 VELFPIFARA-----HVLRTWGGIVDT--------TMDASPIISKTP-IQNLYVNCGWGTGGFKGTPGAGFTLAHTIAND 375 (405)
T ss_dssp HHHCGGGGGC-----EECEEEEEEEEE--------ETTSCCEEEECS-SBTEEEEECCGGGCSTTHHHHHHHHHHHHHHT
T ss_pred HHhCCccccC-----CcceEEeecccc--------CCCCCCEecccC-CCCEEEEecCCCchhhHHHHHHHHHHHHHhCC
Confidence 6678865432 233333355554 235666788865 22223333432 44555666777777777654
No 31
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.30 E-value=7.2e-07 Score=90.37 Aligned_cols=201 Identities=14% Similarity=0.135 Sum_probs=104.7
Q ss_pred eeccChHHHHHHHHHHHhhcCcEEEcCc-eEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchhhhhhhcC------C
Q 014843 32 LEFREPAKLIEIVKKRFISLGGVIFEGY-SVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQIRSG------R 104 (417)
Q Consensus 32 ~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t-~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spiarql~~g------~ 104 (417)
...|++..++..|.+++.+.|+++..++ ++.++. ....++++||+|+|..|.+....... .
T Consensus 116 ~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~------------~~~~~ad~VV~AdG~~S~~~~~~~~~~~~~~~~ 183 (430)
T 3ihm_A 116 SRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE------------GLSEQYDLLVVCTGKYALGKVFEKQSENSPFEK 183 (430)
T ss_dssp EBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH------------HHHTTSSEEEECCCCTTGGGGSCBCGGGCCCSS
T ss_pred ceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh------------hhcccCCEEEECCCCcchHHhccCCCCCCcccC
Confidence 3458999999999999999998887632 011110 00125789999999998764322111 1
Q ss_pred CCCceeeeeeeeeecCCCCCcceEEEecccccccCCCCCceeeeecCC--CCCCCCceEEEEEeeCCCC----CC----C
Q 014843 105 KPDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPA--GSGPLDRTTYMFTYIDPQA----GS----P 174 (417)
Q Consensus 105 ~~~~vc~~vg~~a~G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~--~dg~~e~ttyLf~y~~~~~----~~----p 174 (417)
++... ...+..|+...+...+.+...+ +.+.+| .+|. .+| ..+++++....... .. .
T Consensus 184 p~r~~---~~~~~~g~~~~~~~~~~~~~~~-------~~G~~~-~~p~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (430)
T 3ihm_A 184 PQRAL---CVGLFKGIKEAPIRAVTMSFSP-------GHGELI-EIPTLSFNG--MSTALVLENHIGSDLEVLAHTKYDD 250 (430)
T ss_dssp CSSEE---EEEEEESBCCCSSCCEEEEEET-------TTEEEE-EEEEEETTE--EEEEEEEEECTTSSSGGGGTSCTTT
T ss_pred CCeeE---EEEEEccCCCCCcCeeeeeecC-------CCcceE-EecccCCCc--ceEEEEEEecCCCcHHHhccccCCC
Confidence 11211 1223345542222222232222 246666 5674 223 13344432222110 00 1
Q ss_pred CHH----HHHHHHHHhCCcccCCCCCccceEE------e-eeeecCCCCCCCCCCCCCCEEE-EcCCCCCCCCccccchh
Q 014843 175 KLE----ELLERYWDLMPEYQGVTLDNLEIQR------V-IYGIFPTYRDSPLPAAFNRILQ-FGDASGIQSPVSFGGFG 242 (417)
Q Consensus 175 sL~----~l~e~y~~~LP~y~g~~l~~~~~~~------~-~~G~~P~~~~~p~~~~~driLl-vGDAAglvdPlSg~GfG 242 (417)
+.+ ++.+.+....|..... ++...+.. . ...+.|.......+...+|+++ +||||..++|++|.|+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~ 329 (430)
T 3ihm_A 251 DPRAFLDLMLEKLGKHHPSVAER-IDPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTIIGLGDIQATVDPVLGQGAN 329 (430)
T ss_dssp CHHHHHHHHHHHHHHHCHHHHTT-BCTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEEECGGGTEECCGGGCCHHH
T ss_pred CHHHHHHHHHHHHHHhCccHHHH-HhhchhccccCccceeecceeecccccccccCCCCEEEEecCccccCCCchhhhHH
Confidence 333 3333333334433332 22222000 0 0122343222111334567777 99999999999999999
Q ss_pred HHHhhHHHHHHHHHHH
Q 014843 243 SLTRHLGRLSTGVYEA 258 (417)
Q Consensus 243 s~lR~l~rla~gI~~A 258 (417)
.+++.+.-|++.|..+
T Consensus 330 ~a~~da~~l~~~l~~~ 345 (430)
T 3ihm_A 330 MASYAAWILGEEILAH 345 (430)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999988888888764
No 32
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.22 E-value=1.5e-05 Score=77.82 Aligned_cols=200 Identities=12% Similarity=0.098 Sum_probs=112.8
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch-hhhhhhcCCCCCceeee
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP-VVKQIRSGRKPDGVCLV 112 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp-iarql~~g~~~~~vc~~ 112 (417)
.+++.++...|.+++.+.|++++.+++|++++.+++++.|++.+| +++|+.||.|+|..|. +.+.++...+ +.++
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g~~~p---l~~~ 221 (389)
T 2gf3_A 146 VLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLNLDIP---LQPY 221 (389)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGTEECC---CEEE
T ss_pred EEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhccCCc---eEEE
Confidence 467899999999999999999999999999999888898988544 7999999999999875 4444331121 2222
Q ss_pred eeeeee-cCCC-----CCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEee-----CCCC----C--CC-
Q 014843 113 VGSCAR-GFKD-----NSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYI-----DPQA----G--SP- 174 (417)
Q Consensus 113 vg~~a~-G~~d-----~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~-----~~~~----~--~p- 174 (417)
-++++. .... ...-.+++... ..+++| .+|..++ ..+.++... +... . .+
T Consensus 222 rg~~~~~~~~~~~~~~~~~~p~~~~~~--------~~~~~y-~~p~~~g---~~~~iG~~~~~~~~~~~~~~~~~~~~~~ 289 (389)
T 2gf3_A 222 RQVVGFFESDESKYSNDIDFPGFMVEV--------PNGIYY-GFPSFGG---CGLKLGYHTFGQKIDPDTINREFGVYPE 289 (389)
T ss_dssp EEEEEEECCCHHHHBGGGTCCEEEEEE--------TTEEEE-EECBSTT---CCEEEEESSCCEECCTTTCCCCTTSSHH
T ss_pred EEEEEEEecCcccccccccCCEEEEeC--------CCCcEE-EcCCCCC---CcEEEEEcCCCCccCcccccCccCCCHH
Confidence 222221 1000 00001111110 123666 6787764 123333221 1111 1 22
Q ss_pred CHHHHHHHHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchh-HHHhhHHHHHH
Q 014843 175 KLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFG-SLTRHLGRLST 253 (417)
Q Consensus 175 sL~~l~e~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfG-s~lR~l~rla~ 253 (417)
..+++.+...+.+|.... ++.+.-.|..|.- .|+.-.+|.....-+=+..+|++ ..+..++.+++
T Consensus 290 ~~~~l~~~~~~~~P~l~~------~~~~~w~g~r~~t--------~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~ 355 (389)
T 2gf3_A 290 DESNLRAFLEEYMPGANG------ELKRGAVCMYTKT--------LDEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGE 355 (389)
T ss_dssp HHHHHHHHHHHHCGGGCS------CEEEEEEEEEEEC--------TTSCCEEEEETTEEEEEEEECCTTCCGGGHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCC------CceEEEEEEeccC--------CCCCeEEccCCCCCCEEEEECCccccccccHHHHH
Confidence 345666666667886543 2333334666652 24445566543221123344442 24555666788
Q ss_pred HHHHHHhCCC
Q 014843 254 GVYEAVRGDF 263 (417)
Q Consensus 254 gI~~AL~~~~ 263 (417)
.+++.+..+.
T Consensus 356 ~la~~i~~~~ 365 (389)
T 2gf3_A 356 VLSQLALTGK 365 (389)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHcCCC
Confidence 8877776654
No 33
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.21 E-value=3.2e-05 Score=79.90 Aligned_cols=203 Identities=15% Similarity=0.149 Sum_probs=119.0
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEec---CCc--EEEEEEEEeccCCCchhhhh--hhcCCCCC
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGK--ILSSHLIIDAMGNFSPVVKQ--IRSGRKPD 107 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~---~g~--~~~ARlVIDA~G~~Spiarq--l~~g~~~~ 107 (417)
||+.+|...|.+.|.+.|++++.+++|+++..+++.+.|++. +|+ +++||.||.|+|..|.-..+ ++... ..
T Consensus 146 v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~-~~ 224 (501)
T 2qcu_A 146 VDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPS-PY 224 (501)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCC-SS
T ss_pred EcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCc-cc
Confidence 799999999999999999999999999999998887778763 465 79999999999999875443 33211 11
Q ss_pred ceeeeeeeeee--cCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCC---CC--CCC---CHH
Q 014843 108 GVCLVVGSCAR--GFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDP---QA--GSP---KLE 177 (417)
Q Consensus 108 ~vc~~vg~~a~--G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~---~~--~~p---sL~ 177 (417)
.+.++-|+... ...... .-+++.. + .+..+| .+|..++ .+.+++-+.. .+ ..+ ..+
T Consensus 225 ~i~p~rG~~~~~~~~~~~~-~~~~~~~---~-----dg~~~~-~~P~~~g----~~~iG~t~~~~~~~~~~~~~~~~~~~ 290 (501)
T 2qcu_A 225 GIRLIKGSHIVVPRVHTQK-QAYILQN---E-----DKRIVF-VIPWMDE----FSIIGTTDVEYKGDPKAVKIEESEIN 290 (501)
T ss_dssp CBCCEEEEEEEEECSSSCS-CEEEEEC---T-----TSCEEE-EEEETTT----EEEEECCCEECCSCGGGCCCCHHHHH
T ss_pred ccccceeEEEEECCCCCCc-eEEEeec---C-----CCCEEE-EEEcCCC----cEEEcCCCCCCCCCcCCCCCCHHHHH
Confidence 13333333221 111111 1122221 1 134666 6898754 3445543221 11 112 355
Q ss_pred HHHHHHHHhCC-cccCCCCCccceEEeeeeecCCCCC-CC--CCCCCCCEEE--EcCCCCCCCCccccchhHHHhhHHHH
Q 014843 178 ELLERYWDLMP-EYQGVTLDNLEIQRVIYGIFPTYRD-SP--LPAAFNRILQ--FGDASGIQSPVSFGGFGSLTRHLGRL 251 (417)
Q Consensus 178 ~l~e~y~~~LP-~y~g~~l~~~~~~~~~~G~~P~~~~-~p--~~~~~driLl--vGDAAglvdPlSg~GfGs~lR~l~rl 251 (417)
.+.+...+.+| ... +.++.+.-.|.-|...+ .| .++..+.++. .++...-.-.++|+|+... +.+
T Consensus 291 ~l~~~~~~~~p~~l~-----~~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~----~~~ 361 (501)
T 2qcu_A 291 YLLNVYNTHFKKQLS-----RDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTY----RKL 361 (501)
T ss_dssp HHHHHHHHHBSSCCC-----GGGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGH----HHH
T ss_pred HHHHHHHHhcCCCCC-----cccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccch----HHH
Confidence 56666666677 332 33344444477777642 12 2345577776 6655333334677765443 446
Q ss_pred HHHHHHHHhC
Q 014843 252 STGVYEAVRG 261 (417)
Q Consensus 252 a~gI~~AL~~ 261 (417)
|+.+...+..
T Consensus 362 Ae~~~~~~~~ 371 (501)
T 2qcu_A 362 AEHALEKLTP 371 (501)
T ss_dssp HHHHHHHHGG
T ss_pred HHHHHHHHHH
Confidence 7766666654
No 34
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.20 E-value=8.7e-05 Score=73.07 Aligned_cols=68 Identities=9% Similarity=0.159 Sum_probs=58.4
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCc-hhhhhhhc
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS-PVVKQIRS 102 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~S-piarql~~ 102 (417)
.+++.++.+.|.+++.+.|++++.+++|++++.++++|+|+|.+| +++|+.||.|+|..| .+.++++.
T Consensus 149 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~ 217 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGA 217 (397)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGTC
T ss_pred EEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcCC
Confidence 467889999999999999999999999999999999999988554 799999999999984 46665543
No 35
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.20 E-value=4.7e-05 Score=74.31 Aligned_cols=66 Identities=12% Similarity=0.205 Sum_probs=58.5
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEE-EEecCCcEEEEEEEEeccCCCch-hhhhhh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP-VVKQIR 101 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~-V~t~~g~~~~ARlVIDA~G~~Sp-iarql~ 101 (417)
+|+.++.+.|.+.+.+.|++++.+++|++++.++++|+ |++.+| +++|+.||.|+|..|+ +.+.++
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g 213 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAG 213 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHT
T ss_pred ECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcC
Confidence 78999999999999999999999999999999988888 888666 8999999999999984 555544
No 36
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.13 E-value=1.8e-05 Score=76.63 Aligned_cols=199 Identities=11% Similarity=0.014 Sum_probs=115.5
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch-hhhhhhcCCCCCceeee
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP-VVKQIRSGRKPDGVCLV 112 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp-iarql~~g~~~~~vc~~ 112 (417)
.+++.++...|.+.|.+.|++++.+++|++++.+++++.|+|.+| +++|+.||.|+|..|+ +.+.++.. +..+.++
T Consensus 150 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~--~~~~~p~ 226 (381)
T 3nyc_A 150 DIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR--PLGLQPK 226 (381)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC--CCCCEEE
T ss_pred eECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC--CCceeee
Confidence 379999999999999999999999999999999999999998766 8999999999999884 55554432 1122333
Q ss_pred eeeeee-cCCC-CCcc--eEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCC--CC--CCCC---HHHHHH
Q 014843 113 VGSCAR-GFKD-NSTS--DVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDP--QA--GSPK---LEELLE 181 (417)
Q Consensus 113 vg~~a~-G~~d-~~~g--ei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~--~~--~~ps---L~~l~e 181 (417)
-++.+. ..+. .... .++... ...++ ..|.. + . +.++...+. .+ ..|+ ++++.+
T Consensus 227 rg~~~~~~~~~~~~~~~~p~~~~~----------~~~~y-~~p~~-g---~-~~ig~~~~~~~~~~~~~~~~~~~~~~~~ 290 (381)
T 3nyc_A 227 RRSAFIFAPPPGIDCHDWPMLVSL----------DESFY-LKPDA-G---M-LLGSPANADPVEAHDVQPEQLDIATGMY 290 (381)
T ss_dssp EEEEEEECCCTTCCCTTCCEEEET----------TSSCE-EEEET-T---E-EEEECCCCEECCSSCCCCCHHHHHHHHH
T ss_pred EEEEEEECCCcCCCcCccceEEeC----------CCCEE-EEeCC-C---c-EEEeCCcCCCCCcccCCCChHHHHHHHH
Confidence 333322 1111 0000 011111 12233 46765 3 2 222222211 11 1232 345554
Q ss_pred HHHHhCCcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccch-hHHHhhHHHHHHHHHHHHh
Q 014843 182 RYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGF-GSLTRHLGRLSTGVYEAVR 260 (417)
Q Consensus 182 ~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~Gf-Gs~lR~l~rla~gI~~AL~ 260 (417)
++ ..+|... +.++.+.-.|..|.- .|+.-.+|...+.-+-+..+|+ |.-+-.++-+++.+++.+.
T Consensus 291 ~~-~~~~~l~-----~~~~~~~w~G~r~~t--------~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~ 356 (381)
T 3nyc_A 291 LI-EEATTLT-----IRRPEHTWAGLRSFV--------ADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIR 356 (381)
T ss_dssp HH-HHHBSCC-----CCCCSEEEEEEEEEC--------TTSCCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHHHHT
T ss_pred HH-HhcCCCc-----ccceeeeeEEccccC--------CCCCceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHHHHh
Confidence 43 3344332 223333334666652 2455567766544444555555 3455666778888888887
Q ss_pred CCCCC
Q 014843 261 GDFVD 265 (417)
Q Consensus 261 ~~~ls 265 (417)
.+...
T Consensus 357 g~~~~ 361 (381)
T 3nyc_A 357 HQPLP 361 (381)
T ss_dssp TCCCC
T ss_pred CCCCC
Confidence 76554
No 37
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.11 E-value=8.7e-05 Score=71.17 Aligned_cols=67 Identities=15% Similarity=0.100 Sum_probs=59.3
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCe-EEEEecCC--cEEEEEEEEeccCCCc-hhhhhh
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEG--KILSSHLIIDAMGNFS-PVVKQI 100 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~-v~V~t~~g--~~~~ARlVIDA~G~~S-piarql 100 (417)
.+++.++.+.|.+++.+.|++++.+++|++++.++++ +.|++.+| .+++|+.||.|+|..| .+++++
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~ 216 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRI 216 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTE
T ss_pred EECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHh
Confidence 3789999999999999999999999999999998877 88888776 4899999999999998 456655
No 38
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.71 E-value=0.00032 Score=75.32 Aligned_cols=63 Identities=13% Similarity=0.067 Sum_probs=57.2
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCc-EEEEEEEEeccCCCchh
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK-ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~-~~~ARlVIDA~G~~Spi 96 (417)
.+++.+|...|.+.+.+.|++|+.+++|++++.++++|.|++.+|+ +++|+.||.|+|..|+-
T Consensus 408 ~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~ 471 (689)
T 3pvc_A 408 WLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPE 471 (689)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTC
T ss_pred EECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhc
Confidence 3788999999999999999999999999999999999999987777 89999999999998763
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.69 E-value=0.00075 Score=72.15 Aligned_cols=63 Identities=17% Similarity=0.187 Sum_probs=58.5
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
.+++..+...|.+++.+.|++|+.+|+|++++.++++|.|++.+|.+++|+.||.|+|..|+-
T Consensus 413 ~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~ 475 (676)
T 3ps9_A 413 WLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISR 475 (676)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGC
T ss_pred eeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhc
Confidence 378899999999999999999999999999999999999999877889999999999999873
No 40
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.58 E-value=0.0021 Score=67.53 Aligned_cols=186 Identities=16% Similarity=0.215 Sum_probs=99.8
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEE-EEecC---C--cEEEEEEEEeccCCCchhhhhhhcCCCCC
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAE---G--KILSSHLIIDAMGNFSPVVKQIRSGRKPD 107 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~-V~t~~---g--~~~~ARlVIDA~G~~Spiarql~~g~~~~ 107 (417)
.+|+.+|...|.+.|.+.|++++.+++|+++..+++++. |++.+ | .+++||.||.|+|..|.-..+......+.
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~~~~ 245 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSKHGK 245 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCCCSS
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCCCCc
Confidence 489999999999999999999999999999999988753 65542 3 47999999999999885444332211223
Q ss_pred ceeeeeeeeee--cCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeC---CCCCC--C---CHH
Q 014843 108 GVCLVVGSCAR--GFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYID---PQAGS--P---KLE 177 (417)
Q Consensus 108 ~vc~~vg~~a~--G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~---~~~~~--p---sL~ 177 (417)
.+.++-|+... .-......-+++..+ + .+..++ ..|.. | .+.+++-++ ..... + .++
T Consensus 246 ~v~p~kG~~lvl~~~~~~~~~~~~~~~~--~-----dgr~v~-~iP~~-g----~~~iGtT~~~~~~~~~~~~~t~~~i~ 312 (561)
T 3da1_A 246 YLKLSKGVHLVVDQSRFPLRQAVYFDTE--S-----DGRMIF-AIPRE-G----KTYIGTTDTFYDKDIASPRMTVEDRD 312 (561)
T ss_dssp EEEEEEEEEEEEEGGGSCCSSEEEECCS--S-----SCCCEE-EEEET-T----EEEECCCCEEECSCTTCCCCCHHHHH
T ss_pred eEEeccEEEEEECCccCCCceEEEeccC--C-----CCcEEE-EEecC-C----CEEEcCCCCccCCCcCCCCCCHHHHH
Confidence 34444443321 000000112223221 1 123445 56873 3 344444321 11122 2 455
Q ss_pred HHHHHHHHhCCcccCCCCCccceEEeeeeecCCCCC---CCCCCCCCCEEEEcCCCCCCCCc
Q 014843 178 ELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRD---SPLPAAFNRILQFGDASGIQSPV 236 (417)
Q Consensus 178 ~l~e~y~~~LP~y~g~~l~~~~~~~~~~G~~P~~~~---~p~~~~~driLlvGDAAglvdPl 236 (417)
.+++...+.+|..+ +....+...--|+=|.... .+..+..+.++..++ .++++=+
T Consensus 313 ~ll~~~~~~~P~l~---~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~~-~gli~i~ 370 (561)
T 3da1_A 313 YILAAANYMFPSLR---LTADDVESSWAGLRPLIHEEGKKASEISRKDEIFFSD-SGLISIA 370 (561)
T ss_dssp HHHHHHHHHCTTCC---CCTTTEEEEEEEEEEEEEC-----------CCEEECS-SCCEEEC
T ss_pred HHHHHHHHhCCCCC---CChhhEEEEeEEeccccCCCCCCccccccceEEEecC-CCeEEEe
Confidence 66776666777543 1122334333354454321 233445566666654 5565544
No 41
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.55 E-value=0.0021 Score=67.82 Aligned_cols=65 Identities=12% Similarity=0.138 Sum_probs=53.2
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeE-EEEec---CCc--EEEEEEEEeccCCCchhhhh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGNFSPVVKQ 99 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v-~V~t~---~g~--~~~ARlVIDA~G~~Spiarq 99 (417)
+|+.+|...+.+.|.+.|++++.+++|+++..+++.+ .|++. +|+ +++|+.||.|.|..|.-..+
T Consensus 185 v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~ 255 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRN 255 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHT
T ss_pred EchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHH
Confidence 6889999999999999999999999999999988763 35532 233 79999999999988754443
No 42
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.33 E-value=0.00039 Score=69.39 Aligned_cols=64 Identities=14% Similarity=0.153 Sum_probs=58.3
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCc---eEEEEEEECCeEE-EEecCCcEEEEEEEEeccCCCchhh
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGY---SVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSPVV 97 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t---~v~~i~~~~d~v~-V~t~~g~~~~ARlVIDA~G~~Spia 97 (417)
.+++.++.+.|.+.+.+.|++++.++ +|+++..++++|+ |+|.+|++++|+.||.|+|..|+-.
T Consensus 157 ~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l 224 (438)
T 3dje_A 157 WAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQF 224 (438)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGT
T ss_pred EecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhh
Confidence 46788999999999999999999999 9999999999998 9998888999999999999987643
No 43
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.23 E-value=0.00055 Score=66.32 Aligned_cols=61 Identities=15% Similarity=0.134 Sum_probs=54.9
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
.+++.++.+.|.+.+.+.|++++.+++|++++.+++++.|++.+| +++|+.||.|+|..|+
T Consensus 145 ~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 145 FLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGG
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHH
Confidence 367889999999999999999999999999999988899988666 5999999999998764
No 44
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.21 E-value=0.00033 Score=69.86 Aligned_cols=68 Identities=13% Similarity=0.191 Sum_probs=53.1
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEE---------EEEEECCeEEEEecCCcEEEEEEEEeccCCCc-hhhh-hhhc
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVS---------SICTYENAAVLLLAEGKILSSHLIIDAMGNFS-PVVK-QIRS 102 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~---------~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~S-piar-ql~~ 102 (417)
.|++.+|.+.|.+++.+.|++++.+++|+ ++..++++|.|++.+| +++|+.||.|+|..| .+.+ +++.
T Consensus 168 ~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~ 246 (405)
T 3c4n_A 168 TYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGL 246 (405)
T ss_dssp EECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCC
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcCC
Confidence 47899999999999999999999999999 9988888887777555 899999999999998 5666 5544
No 45
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.21 E-value=0.00077 Score=68.49 Aligned_cols=59 Identities=12% Similarity=0.134 Sum_probs=55.1
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCc
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
.++..+.+.|.+++.+.|++++.+++|+++..+++++.|++.+| +++|+.||.|+|..|
T Consensus 129 ~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 129 HSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp SCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 56789999999999999999999999999999999999998766 899999999999998
No 46
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.21 E-value=0.00093 Score=58.48 Aligned_cols=64 Identities=9% Similarity=0.096 Sum_probs=56.4
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchhhhhh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQI 100 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spiarql 100 (417)
++...+.+.+.+++.+.|.+++.+ ++++++.+++++.|++.+| +++++.||.|+|..|.+.+++
T Consensus 53 ~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~ 116 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLL 116 (180)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCccccC
Confidence 457889999999999999999999 9999999888899988777 899999999999998665543
No 47
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.21 E-value=0.00075 Score=68.48 Aligned_cols=68 Identities=18% Similarity=0.269 Sum_probs=59.2
Q ss_pred ChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCe-EEEEecCCcEEEEEEEEeccCCCc-----------hhhhhhhcC
Q 014843 36 EPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNFS-----------PVVKQIRSG 103 (417)
Q Consensus 36 dr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~-v~V~t~~g~~~~ARlVIDA~G~~S-----------piarql~~g 103 (417)
+...+.+.|.+++.+.|++|+.+++|+++..++++ +.|++.+|++++|+.||.|+|..| .++++++..
T Consensus 132 ~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 132 KAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 35788899999999999999999999999988887 778887777899999999999999 777776543
No 48
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.13 E-value=0.014 Score=59.07 Aligned_cols=56 Identities=21% Similarity=0.265 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEE-EEecCCcEEEEEEEEeccCCC
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~-V~t~~g~~~~ARlVIDA~G~~ 93 (417)
..|-+.|.+.+++.|++|+.+++|++|.+++++++ |++.+|++++|+.||-+.+..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 35667788889999999999999999999999987 888899999999999665543
No 49
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.90 E-value=0.002 Score=59.45 Aligned_cols=62 Identities=15% Similarity=0.031 Sum_probs=52.7
Q ss_pred ChHHHHHHHHHHHhhc-CcEEEcCceEEEEEEECCeE-EEEecCCcEEEEEEEEeccCCCchhhh
Q 014843 36 EPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSPVVK 98 (417)
Q Consensus 36 dr~~L~~~L~~ka~~~-Gg~i~~~t~v~~i~~~~d~v-~V~t~~g~~~~ARlVIDA~G~~Spiar 98 (417)
++..+.++|.+++.+. |.+++ +++|+++..+++++ .|.+.+|++++|+.||.|+|+.|....
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~ 129 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARL 129 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEE
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhce
Confidence 6889999999999986 88888 57999999988875 477777878999999999999866544
No 50
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=96.77 E-value=0.0027 Score=63.97 Aligned_cols=58 Identities=21% Similarity=0.229 Sum_probs=52.7
Q ss_pred ChHHHHHHHHHHHhhcCcEEEcCceEEEEEEE----CCeEEEEecCCcEEEEEEEEeccCCCc
Q 014843 36 EPAKLIEIVKKRFISLGGVIFEGYSVSSICTY----ENAAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 36 dr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~----~d~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
++..+.+.|.+++.+.|++++.+++|+++..+ ++++.|++.+| +++|+.||.|+|..|
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 78889999999999999999999999999987 67788888655 899999999999998
No 51
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.71 E-value=0.0036 Score=62.65 Aligned_cols=67 Identities=19% Similarity=0.282 Sum_probs=56.9
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEE---------------ECCeE-EEEecCCcEE--EEEEEEeccCCCch
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICT---------------YENAA-VLLLAEGKIL--SSHLIIDAMGNFSP 95 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~---------------~~d~v-~V~t~~g~~~--~ARlVIDA~G~~Sp 95 (417)
.+|+.++...|.+++.+.|++++.+++|++++. .++++ .|++.+| ++ +|+.||.|+|..|+
T Consensus 177 ~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred EEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 378999999999999999999999999999998 55554 5777666 68 99999999999887
Q ss_pred -hhhhhh
Q 014843 96 -VVKQIR 101 (417)
Q Consensus 96 -iarql~ 101 (417)
++++++
T Consensus 256 ~l~~~~g 262 (448)
T 3axb_A 256 RLLNPLG 262 (448)
T ss_dssp HHHGGGT
T ss_pred HHHHHcC
Confidence 666654
No 52
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=96.64 E-value=0.045 Score=55.38 Aligned_cols=57 Identities=12% Similarity=0.081 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHhhcC-cEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCC
Q 014843 37 PAKLIEIVKKRFISLG-GVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 37 r~~L~~~L~~ka~~~G-g~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
-..+.+.|.+.+.+.| ++|+.+++|++|+..++++.|++.+|++++|+.||-|.|..
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 3456677777888888 89999999999999999999998888889999999999863
No 53
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.52 E-value=0.046 Score=54.11 Aligned_cols=54 Identities=17% Similarity=0.171 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCC
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
..+-+.|.+.+.+.|++|+.+++|++|..++++| |.+ +|++++|+.||-|.|..
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V~~-~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV-YTR-DNEEYSFDVAISNVGVR 242 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-EET-TCCEEECSEEEECSCHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-EEe-CCcEEEeCEEEECCCHH
Confidence 4677778888888999999999999999998898 754 67899999999999875
No 54
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.46 E-value=0.0049 Score=65.16 Aligned_cols=61 Identities=21% Similarity=0.303 Sum_probs=53.7
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEE-EEecCCcEEEEEEEEeccCCCch
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~-V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
++...+.+.|.+++.+.|++++.+++|+++..+++++. |++.+|++++|++||.|+|+.|.
T Consensus 217 ~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 217 FKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred chHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 34577888999999999999999999999999887655 88878889999999999999985
No 55
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.31 E-value=0.011 Score=56.06 Aligned_cols=59 Identities=8% Similarity=0.108 Sum_probs=53.7
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEE-EEecCCcEEEEEEEEeccCCCc
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~-V~t~~g~~~~ARlVIDA~G~~S 94 (417)
.+++.+.+++.+.+.+.|.+++.+++|+++..+++.|. |++.+| +++++.||.|+|+.|
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 73 PARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp CBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred CCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 45689999999999999999999999999999999999 998766 899999999999864
No 56
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.19 E-value=0.0094 Score=59.63 Aligned_cols=65 Identities=15% Similarity=0.190 Sum_probs=50.2
Q ss_pred ChHHHHHHHHHHHhh-cCcEEEcCceEEEEEEECC----------------------eEEEEe----cC--------CcE
Q 014843 36 EPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYEN----------------------AAVLLL----AE--------GKI 80 (417)
Q Consensus 36 dr~~L~~~L~~ka~~-~Gg~i~~~t~v~~i~~~~d----------------------~v~V~t----~~--------g~~ 80 (417)
+...+.+.|.+++.+ .|++++.++.++++..+++ ++++.. .+ ..+
T Consensus 158 ~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~ 237 (344)
T 3jsk_A 158 HAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNT 237 (344)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEE
T ss_pred cHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceE
Confidence 367778999999988 6999999999999988773 222221 11 247
Q ss_pred EEEEEEEeccCCCchhhhhh
Q 014843 81 LSSHLIIDAMGNFSPVVKQI 100 (417)
Q Consensus 81 ~~ARlVIDA~G~~Spiarql 100 (417)
++||+||+|+|+.|++.+.+
T Consensus 238 i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 238 INAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp EECSEEEECCCSSSSSSCHH
T ss_pred EEcCEEEECCCCCchhhHHH
Confidence 99999999999999976553
No 57
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=96.18 E-value=0.02 Score=54.31 Aligned_cols=65 Identities=8% Similarity=0.200 Sum_probs=52.6
Q ss_pred ChHHHHHHHHHHHhh-cCcEEEcCceEEEEEEECCeE-EEEec---------CC-----cEEEEEEEEeccCCCchhhhh
Q 014843 36 EPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLA---------EG-----KILSSHLIIDAMGNFSPVVKQ 99 (417)
Q Consensus 36 dr~~L~~~L~~ka~~-~Gg~i~~~t~v~~i~~~~d~v-~V~t~---------~g-----~~~~ARlVIDA~G~~Spiarq 99 (417)
++..+...|.+++.+ .|++++.+++|+++..+++.+ .|.+. +| .+++|+.||.|+|+.|.+..+
T Consensus 117 ~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHH
Confidence 678888899999976 799999999999999988754 23321 22 579999999999999888765
Q ss_pred h
Q 014843 100 I 100 (417)
Q Consensus 100 l 100 (417)
.
T Consensus 197 ~ 197 (284)
T 1rp0_A 197 G 197 (284)
T ss_dssp H
T ss_pred H
Confidence 3
No 58
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.15 E-value=0.012 Score=56.78 Aligned_cols=64 Identities=11% Similarity=0.036 Sum_probs=55.6
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECC-eEEEEecCCcEEEEEEEEeccCCCchhhh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFSPVVK 98 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d-~v~V~t~~g~~~~ARlVIDA~G~~Spiar 98 (417)
+++..+.+.+.+++.+.|.+++.+++|+++...++ .+.|++.+|++++++.||.|+|+.|...+
T Consensus 71 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~ 135 (360)
T 3ab1_A 71 VPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPR 135 (360)
T ss_dssp EEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBC
T ss_pred CCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCC
Confidence 56789999999999999999999999999998876 78888877889999999999999764433
No 59
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.13 E-value=0.014 Score=55.42 Aligned_cols=64 Identities=11% Similarity=0.052 Sum_probs=56.0
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchhhh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVK 98 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spiar 98 (417)
+++..+.+.+.+.+.+.|.+++.+++|+++...++.+.|.+.+|.+++++.||.|+|+.|...+
T Consensus 62 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~ 125 (335)
T 2zbw_A 62 VYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPR 125 (335)
T ss_dssp EEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCC
Confidence 5678899999999998899999999999999998889998877878999999999999764433
No 60
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.11 E-value=0.015 Score=54.61 Aligned_cols=62 Identities=15% Similarity=0.162 Sum_probs=55.0
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
.+++..+.+++.+.+.+.|.+++. ++++++..+++.+.|.+.+|++++++.||.|+|+.+.+
T Consensus 55 ~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCC
Confidence 478999999999999999999988 89999999999888887778899999999999987543
No 61
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.04 E-value=0.016 Score=57.52 Aligned_cols=67 Identities=15% Similarity=0.202 Sum_probs=50.6
Q ss_pred ChHHHHHHHHHHHhh-cCcEEEcCceEEEEEEEC--C-------eEEEEe----c--------CCcEEEE----------
Q 014843 36 EPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYE--N-------AAVLLL----A--------EGKILSS---------- 83 (417)
Q Consensus 36 dr~~L~~~L~~ka~~-~Gg~i~~~t~v~~i~~~~--d-------~v~V~t----~--------~g~~~~A---------- 83 (417)
+...+.+.|.+++.+ .|++++.+++|+++..++ + ++++.- . ++.+++|
T Consensus 144 ~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~ 223 (326)
T 2gjc_A 144 HAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRD 223 (326)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCC
T ss_pred chHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecccccccc
Confidence 677889999999988 599999999999999874 2 222320 1 2357999
Q ss_pred -----EEEEeccCCCchhhhhhhc
Q 014843 84 -----HLIIDAMGNFSPVVKQIRS 102 (417)
Q Consensus 84 -----RlVIDA~G~~Spiarql~~ 102 (417)
++||||+||.||+.+++..
T Consensus 224 ~~~~~~~VV~ATG~~~~~~~~~~~ 247 (326)
T 2gjc_A 224 LSQKHGVILSTTGHDGPFGAFCAK 247 (326)
T ss_dssp SSTTCCEEEECCCCC--CCSHHHH
T ss_pred ccccCCEEEECcCCCchHHHHHHh
Confidence 9999999999999987644
No 62
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.01 E-value=0.12 Score=51.17 Aligned_cols=53 Identities=19% Similarity=0.277 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCC
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
.|.+.|.+++.+ ++|+.+++|++|+.++++|.|++.+|++++|+.||-|....
T Consensus 236 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~ 288 (470)
T 3i6d_A 236 TLVEEIEKQLKL--TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHK 288 (470)
T ss_dssp HHHHHHHHTCCS--EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHH
T ss_pred HHHHHHHHhcCC--CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHH
Confidence 444444443332 69999999999999999999999888889999999998654
No 63
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.01 E-value=0.24 Score=47.37 Aligned_cols=42 Identities=17% Similarity=0.115 Sum_probs=38.0
Q ss_pred hcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccC
Q 014843 50 SLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMG 91 (417)
Q Consensus 50 ~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G 91 (417)
+.|++|+.+++|++++.++++|.|++.+|++++++.||-|..
T Consensus 121 ~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p 162 (342)
T 3qj4_A 121 ESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMP 162 (342)
T ss_dssp HHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSC
T ss_pred hcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCC
Confidence 348999999999999999999999988787799999999976
No 64
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=95.90 E-value=0.0041 Score=64.28 Aligned_cols=66 Identities=15% Similarity=0.007 Sum_probs=55.4
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEE---CCeEEEEe--c-CC--cEEEEEEEEeccCCCchhhhhh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTY---ENAAVLLL--A-EG--KILSSHLIIDAMGNFSPVVKQI 100 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~---~d~v~V~t--~-~g--~~~~ARlVIDA~G~~Spiarql 100 (417)
+++..|.+.|.+.+.+.|++|+.+++|++++.+ ++++.|++ . +| .+++|++||.|+|..|.+.+..
T Consensus 163 ~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~ 236 (497)
T 2bry_A 163 ISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFT 236 (497)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccccccc
Confidence 667899999999999999999999999999875 35677776 3 45 4799999999999999886543
No 65
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.83 E-value=0.012 Score=64.31 Aligned_cols=63 Identities=16% Similarity=0.281 Sum_probs=55.6
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeE-EEEecCCcEEEEEEEEeccCCCchhh
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSPVV 97 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v-~V~t~~g~~~~ARlVIDA~G~~Spia 97 (417)
.+++.++...|.+.+.+.|++++.+++|++++.+++++ .|.|.+| +++|+.||.|+|..|+-.
T Consensus 147 ~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l 210 (830)
T 1pj5_A 147 LASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKI 210 (830)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHH
T ss_pred eEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHH
Confidence 36899999999999999999999999999999988886 4777655 899999999999998643
No 66
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=95.74 E-value=0.028 Score=54.14 Aligned_cols=194 Identities=10% Similarity=0.038 Sum_probs=102.1
Q ss_pred eccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchhhhhhhcCCCCCceeee
Q 014843 33 EFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQIRSGRKPDGVCLV 112 (417)
Q Consensus 33 ~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spiarql~~g~~~~~vc~~ 112 (417)
-.+|+.++...|.++|.+.|+++.+ ++|++++..+ .++|+.||.|+|..|.-.. .. ..+.++
T Consensus 137 ~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s~~l~---~~---~~l~p~ 198 (351)
T 3g3e_A 137 LILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWAGALQ---RD---PLLQPG 198 (351)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGGGGTS---CC---TTCEEE
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcChHhhc---CC---Cceeec
Confidence 3489999999999999999999998 8887764321 2678999999999875332 11 122333
Q ss_pred eeeeeecCCCCCcceEEEecccccccCCCCCceeeeecCCCCCCCCceEEEEEeeCCC--CCCC---CHHHHHHHHHHhC
Q 014843 113 VGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQ--AGSP---KLEELLERYWDLM 187 (417)
Q Consensus 113 vg~~a~G~~d~~~gei~fs~~~v~~~~~~~~qy~We~FP~~dg~~e~ttyLf~y~~~~--~~~p---sL~~l~e~y~~~L 187 (417)
-+++.. ++.......++.+.+... ...+++ ..|..++ +.++...+.. ...+ ..+++.+...+.+
T Consensus 199 rg~~~~-~~~~~~~~~~~~~~~~~~----~~~~~y-~~p~~~~-----~~iGg~~~~~~~~~~~~~~~~~~l~~~~~~~~ 267 (351)
T 3g3e_A 199 RGQIMK-VDAPWMKHFILTHDPERG----IYNSPY-IIPGTQT-----VTLGGIFQLGNWSELNNIQDHNTIWEGCCRLE 267 (351)
T ss_dssp EEEEEE-EECTTCCSEEEECCTTTC----TTCSCE-EEECSSC-----EEEECCCEETCCCCSCCHHHHHHHHHHHHHHC
T ss_pred CCcEEE-EeCCCcceEEEeccccCC----CCceeE-EEeCCCc-----EEEeeeeecCCCCCCCCHHHHHHHHHHHHHhC
Confidence 333221 000011222332211100 123455 4687642 2333222211 1122 4566777777778
Q ss_pred CcccCCCCCccceEEeeeeecCCCCCCCCCCCCCCEEEEcCCC---CC--CCCccccchhHHHhhHHHHHHHHHHHHhCC
Q 014843 188 PEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDAS---GI--QSPVSFGGFGSLTRHLGRLSTGVYEAVRGD 262 (417)
Q Consensus 188 P~y~g~~l~~~~~~~~~~G~~P~~~~~p~~~~~driLlvGDAA---gl--vdPlSg~GfGs~lR~l~rla~gI~~AL~~~ 262 (417)
|..+ +.++.+.-.|..|+-.+ .++.. -.+|-.. ++ .-=++|-||..+--.+..+++.|..+++..
T Consensus 268 P~l~-----~~~i~~~w~G~r~~t~D--~p~~~---~~ig~~~~~~~~~~~~G~~g~G~~~ap~~g~~la~li~~~~~~~ 337 (351)
T 3g3e_A 268 PTLK-----NARIIGERTGFRPVRPQ--IRLER---EQLRTGPSNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILEEK 337 (351)
T ss_dssp GGGG-----GCEEEEEEEEEEEECSS--CEEEE---EEECCSSSCEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcc-----CCcEeeeeEeeCCCCCC--cccee---eeccCCCCCCeEEEEeCCCcchHhhhHHHHHHHHHHHHHHHHhc
Confidence 8544 33455555577777321 22100 0133211 11 111344567666666666888888888775
Q ss_pred CCC
Q 014843 263 FVD 265 (417)
Q Consensus 263 ~ls 265 (417)
.++
T Consensus 338 ~~~ 340 (351)
T 3g3e_A 338 KLS 340 (351)
T ss_dssp TCC
T ss_pred ccc
Confidence 544
No 67
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=95.56 E-value=0.028 Score=58.71 Aligned_cols=62 Identities=13% Similarity=0.143 Sum_probs=51.6
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEEC-Ce---EEEEecCCc--EEEEEEEEeccCCCchh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NA---AVLLLAEGK--ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~-d~---v~V~t~~g~--~~~ARlVIDA~G~~Spi 96 (417)
++...+.+.|.+++.+.|++|+.+++|+++..++ +. |++.+.+|+ +++|+.||.|+|..|..
T Consensus 247 ~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 247 SSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTC
T ss_pred CCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccC
Confidence 3477899999999999999999999999999887 54 334433565 69999999999999875
No 68
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=95.50 E-value=1.4 Score=43.17 Aligned_cols=48 Identities=15% Similarity=0.122 Sum_probs=40.3
Q ss_pred HHHHH-hhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCC
Q 014843 44 VKKRF-ISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 92 (417)
Q Consensus 44 L~~ka-~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~ 92 (417)
+.+++ .+.| +|+.+++|++|+..+++++|++.+|++++|+.||-|.|.
T Consensus 209 l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~ 257 (431)
T 3k7m_X 209 LVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPM 257 (431)
T ss_dssp HHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCG
T ss_pred HHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCc
Confidence 33444 4455 999999999999999999999988888999999999983
No 69
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=95.35 E-value=0.048 Score=58.83 Aligned_cols=62 Identities=10% Similarity=0.112 Sum_probs=53.5
Q ss_pred eccChHHHHHHHHHHHhh-cCcEEEcCceEEEEEEECCeEE-EEecCCcEEEEEEEEeccCCCch
Q 014843 33 EFREPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 33 ~~Vdr~~L~~~L~~ka~~-~Gg~i~~~t~v~~i~~~~d~v~-V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
..+|+..+.+.+.+.+.+ .|.+++. ++|+.+..+++.+. |.+.+|.+++|+.||.|+|..+.
T Consensus 112 ~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 112 AQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred hhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 358999999999999988 5889875 48999999888877 88878889999999999998754
No 70
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.32 E-value=0.033 Score=56.10 Aligned_cols=60 Identities=13% Similarity=-0.006 Sum_probs=52.8
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecC---Cc---EEEEEEEEeccCCCc
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE---GK---ILSSHLIIDAMGNFS 94 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~---g~---~~~ARlVIDA~G~~S 94 (417)
+.+..+.+++.+.+.+.+..+..+++|+++...+++|.|++.+ |+ +++++.||.|+|+.|
T Consensus 112 ~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 112 PHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp CBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred CCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 5678999999999988888899999999999999999998765 66 799999999999965
No 71
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.24 E-value=0.019 Score=54.48 Aligned_cols=61 Identities=18% Similarity=0.220 Sum_probs=53.4
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchhh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVV 97 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spia 97 (417)
+++..+.+.+.+.+.+.|.+++.++ ++++...++++.|++ +|++++++.||.|+|+.+...
T Consensus 67 ~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 67 ILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCC
Confidence 5788999999999999999999887 999988888899988 778999999999999986543
No 72
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.23 E-value=0.041 Score=57.61 Aligned_cols=60 Identities=13% Similarity=0.181 Sum_probs=54.0
Q ss_pred cChHHHHHHHHHHHhhcCc--EEEcCceEEEEEEECC--eEEEEecCCcEEEEEEEEeccCCCc
Q 014843 35 REPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg--~i~~~t~v~~i~~~~d--~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
.++..+.+++.+.+.+.|. .+..+++|+++...++ .|.|++.+|++++++.||.|+|+.|
T Consensus 84 ~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 84 ITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp EEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred CCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 6688999999999999887 8999999999999887 8999998888999999999999743
No 73
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=95.16 E-value=0.046 Score=52.85 Aligned_cols=50 Identities=16% Similarity=0.161 Sum_probs=42.2
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
.||+.+|...|.++|.+.|+++++ ++|++++.. .+ +|+.||.|+|..|.-
T Consensus 138 ~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~-----------~~-~a~~VV~A~G~~s~~ 187 (363)
T 1c0p_A 138 SVHAPKYCQYLARELQKLGATFER-RTVTSLEQA-----------FD-GADLVVNATGLGAKS 187 (363)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT-----------CS-SCSEEEECCGGGGGT
T ss_pred eecHHHHHHHHHHHHHHCCCEEEE-EEcccHhhc-----------Cc-CCCEEEECCCcchhh
Confidence 489999999999999999999998 898887532 12 789999999998753
No 74
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=95.14 E-value=0.31 Score=48.83 Aligned_cols=51 Identities=14% Similarity=0.050 Sum_probs=40.5
Q ss_pred HHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCC
Q 014843 40 LIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 40 L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
|.+.|.+++.+ ++|+.+++|++|+.++++|.|+|.+| +++|+.||-|.+..
T Consensus 238 l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~ 288 (475)
T 3lov_A 238 LIERLEEVLER--SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHP 288 (475)
T ss_dssp HHHHHHHHCSS--CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHH
T ss_pred HHHHHHhhccC--CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHH
Confidence 44444443332 69999999999999999999999878 89999999998753
No 75
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.06 E-value=0.11 Score=47.87 Aligned_cols=63 Identities=13% Similarity=0.131 Sum_probs=53.3
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
.+++..+..++.+.+.+.++..+..++|+++..+++++.|++.+|++++++.||-|+|+.+.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 52 GKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDEL 114 (297)
T ss_dssp TCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEEC
T ss_pred CCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCC
Confidence 478899999999999987444444569999999999999999888899999999999997543
No 76
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=95.01 E-value=0.059 Score=50.49 Aligned_cols=61 Identities=21% Similarity=0.137 Sum_probs=52.4
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECC---eEEEEecCCcEEEEEEEEeccCCCch
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN---AAVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d---~v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
.++..+.+.+.+.+.+.|.+++.+++|+.+..+.+ .+.|++.+|++++++.||.|+|+.+.
T Consensus 53 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWR 116 (310)
T ss_dssp EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 46788999999999999999999999999976533 78888877888999999999998753
No 77
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=94.95 E-value=0.048 Score=58.89 Aligned_cols=61 Identities=11% Similarity=0.141 Sum_probs=52.1
Q ss_pred ccChHHHHHHHHHHHhh-cCcEEEcCceEEEEEEECCeE-EEEecCCcEEEEEEEEeccCCCch
Q 014843 34 FREPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~-~Gg~i~~~t~v~~i~~~~d~v-~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
.+|+..+...+.+.+.+ .|++++ +++|+.+..+++.+ .|.+.+|.+++|+.||.|+|..|.
T Consensus 120 ~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 120 QADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 58999999999999988 688996 57999999887765 577777888999999999999763
No 78
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.93 E-value=0.064 Score=55.68 Aligned_cols=61 Identities=13% Similarity=0.123 Sum_probs=51.8
Q ss_pred ccChHHHHHHHHHHHhhcC--cEEEcCceEEEEEEECC--eEEEEecCCcEEEEEEEEeccCCCc
Q 014843 34 FREPAKLIEIVKKRFISLG--GVIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~G--g~i~~~t~v~~i~~~~d--~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
..++..+.+++.+.+.+.| ..+..+++|++++..++ .|.|++.+|++++|+.||.|+|+.|
T Consensus 90 ~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 90 YASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLS 154 (542)
T ss_dssp SCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCC
T ss_pred cCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCC
Confidence 3677888999888777755 57999999999998865 7899988888999999999999864
No 79
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.89 E-value=0.067 Score=51.31 Aligned_cols=59 Identities=15% Similarity=0.129 Sum_probs=52.0
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCc
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
+++..+.+++.+.+.+.|.++..+++|+++..+++++.|++.++ +++++.||-|+|+.+
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTT
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCC
Confidence 56678889999999889999999999999999888899988665 699999999999974
No 80
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=94.87 E-value=0.046 Score=57.08 Aligned_cols=60 Identities=8% Similarity=0.033 Sum_probs=49.7
Q ss_pred ChHHHHHHHHHHHhhcCcEEEcCceEEEEEEEC-Ce---EEEEecCCc--EEEEEEEEeccCCCch
Q 014843 36 EPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NA---AVLLLAEGK--ILSSHLIIDAMGNFSP 95 (417)
Q Consensus 36 dr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~-d~---v~V~t~~g~--~~~ARlVIDA~G~~Sp 95 (417)
+...+.+.|.+++.+.|++|+.+++|+++..++ +. +++.+.+|+ +++|+.||.|+|..|.
T Consensus 253 ~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 253 VGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 357899999999999999999999999999876 43 334433565 7899999999999886
No 81
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.71 E-value=0.067 Score=56.05 Aligned_cols=60 Identities=13% Similarity=0.119 Sum_probs=53.6
Q ss_pred ccChHHHHHHHHHHHhhcCc--EEEcCceEEEEEEECC--eEEEEecCCcEEEEEEEEeccCCC
Q 014843 34 FREPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg--~i~~~t~v~~i~~~~d--~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
..++..+.+++.+.+.+.|. .+..+++|+++...++ .|.|++.+|++++++.||.|+|..
T Consensus 95 ~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred CCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 36788999999999999887 8999999999999887 899999888899999999999953
No 82
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=94.66 E-value=0.088 Score=49.70 Aligned_cols=60 Identities=10% Similarity=0.028 Sum_probs=52.1
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
.+++..+.+.+.+.+.+.|.++.. ++++++..+++.+.|.+ ++.+++++.||.|+|..+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 68 SIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp SBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEEC
T ss_pred ccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcc
Confidence 367788999999999999999888 79999999999888887 5678999999999998654
No 83
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=94.66 E-value=0.05 Score=58.63 Aligned_cols=62 Identities=18% Similarity=0.104 Sum_probs=52.8
Q ss_pred eccChHHHHHHHHHHHhh-cCcEEEcCceEEEEEEECCeEE-EEecCCcEEEEEEEEeccCCCch
Q 014843 33 EFREPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 33 ~~Vdr~~L~~~L~~ka~~-~Gg~i~~~t~v~~i~~~~d~v~-V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
..+|+..+.+.+.+.+.+ .|.+++ +++|+++..+++.+. |.+.+|.+++|+.||.|+|..+.
T Consensus 118 ~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 118 AQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 357999999999999988 688996 579999998877764 77878889999999999998753
No 84
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=94.66 E-value=1.5 Score=44.50 Aligned_cols=43 Identities=14% Similarity=0.114 Sum_probs=39.0
Q ss_pred cCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCC
Q 014843 51 LGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 51 ~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
.|++|+.+++|++|..++++|+|++.+|++++|+.||-|.+..
T Consensus 225 lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 225 LGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGG
T ss_pred cCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHH
Confidence 3789999999999999999999998888899999999998865
No 85
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=94.51 E-value=0.13 Score=47.93 Aligned_cols=59 Identities=12% Similarity=0.088 Sum_probs=52.0
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCc
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
+++..+.+++.+.+.+.|.++.. ++|+++..+++.+.|++.+|.+++++.||-|+|+.+
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 67 IQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp EEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEE
T ss_pred CCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCC
Confidence 56789999999999999999998 999999999889999998778999999999999884
No 86
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.38 E-value=0.074 Score=50.37 Aligned_cols=60 Identities=10% Similarity=0.026 Sum_probs=50.8
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEE--CCe-EEEEecCCcEEEEEEEEeccCCCch
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTY--ENA-AVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~--~d~-v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
+++..+.+++.+.+.+.|.+++. ++++++..+ +++ +.|.+.+|++++++.||.|+|..+.
T Consensus 62 ~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 62 IAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR 124 (325)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 57889999999999999999887 689999887 554 6777667889999999999998653
No 87
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=94.24 E-value=0.28 Score=50.88 Aligned_cols=58 Identities=14% Similarity=0.083 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHhhcCcEEEcCceEEEEEE-ECCe-EEEEecCCcEEEEEEEEeccCCCc
Q 014843 37 PAKLIEIVKKRFISLGGVIFEGYSVSSICT-YENA-AVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 37 r~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~-~~d~-v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
...|-+-+.+.+.+.|+++..+++|++|.. +++. +.|++.+|++++|+.||-|.|...
T Consensus 255 ~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~~ 314 (475)
T 3p1w_A 255 LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYVM 314 (475)
T ss_dssp TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGCT
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCccc
Confidence 457778888889999999999999999998 4444 458887788999999999999873
No 88
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=94.05 E-value=0.095 Score=54.95 Aligned_cols=60 Identities=13% Similarity=0.117 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHhhcCcEEEcCceEEEEEEEC-Ce---EEEEecCCc--EEEEEEEEeccCCCchh
Q 014843 37 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NA---AVLLLAEGK--ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 37 r~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~-d~---v~V~t~~g~--~~~ARlVIDA~G~~Spi 96 (417)
...+...|.+++.+.|++|+.+++|+++..++ +. |++.+.+|+ +++|+.||.|+|..|..
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~ 319 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKN 319 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccC
Confidence 66899999999999999999999999998876 43 344433564 68999999999998853
No 89
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=94.02 E-value=0.12 Score=48.45 Aligned_cols=59 Identities=20% Similarity=0.177 Sum_probs=52.4
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECC-eEEEEecCCcEEEEEEEEeccCCCc
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d-~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
+++..+..++.+.+.+.|.+++.+++|+++...++ .+.|++.+|+ ++++.||-|+|..+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 64 IRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGA 123 (332)
T ss_dssp EEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSC
T ss_pred CCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCc
Confidence 46889999999999999999999999999999887 7889887665 99999999999953
No 90
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.00 E-value=0.15 Score=52.76 Aligned_cols=61 Identities=21% Similarity=0.172 Sum_probs=52.9
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEEC---CeEEEEecCCcEEEEEEEEeccCCCch
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE---NAAVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~---d~v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
.++..+.+.+.+.+.+.|.+++.+++|+++..+. +.+.|++.+|.+++++.||.|+|+.+.
T Consensus 264 ~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 264 TEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp BCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 5788999999999999999999999999997653 378888877889999999999998653
No 91
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=93.76 E-value=0.12 Score=52.68 Aligned_cols=60 Identities=15% Similarity=0.150 Sum_probs=51.3
Q ss_pred ccChHHHHHHHHHHHhhcCcE--EEcCceEEEEEEECC--eEEEEecC---C--cEEEEEEEEeccCCC
Q 014843 34 FREPAKLIEIVKKRFISLGGV--IFEGYSVSSICTYEN--AAVLLLAE---G--KILSSHLIIDAMGNF 93 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~--i~~~t~v~~i~~~~d--~v~V~t~~---g--~~~~ARlVIDA~G~~ 93 (417)
.+++..+.+++.+.+.+.|.+ +..+++|+++...++ .|.|++.+ | .+++++.||-|+|+.
T Consensus 97 ~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~ 165 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHF 165 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSS
T ss_pred CCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCC
Confidence 467889999999999988887 999999999999887 78887654 4 578999999999974
No 92
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.74 E-value=0.047 Score=47.03 Aligned_cols=39 Identities=15% Similarity=-0.027 Sum_probs=33.2
Q ss_pred CCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhCCC
Q 014843 219 AFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDF 263 (417)
Q Consensus 219 ~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~~~ 263 (417)
..+||.++|||. +|.|+..+++++..+|+.|.++|++..
T Consensus 293 ~~~~v~l~GDa~------~g~gv~~A~~sG~~aA~~I~~~L~~e~ 331 (336)
T 3kkj_A 293 ADLGIYVCGDWC------LSGRVEGAWLSGQEAARRLLEHLQLEH 331 (336)
T ss_dssp TTTTEEECCGGG------TTSSHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CCCCEEEEeccc------CCcCHHHHHHHHHHHHHHHHHHhhccC
Confidence 468999999984 688999999998889999999998753
No 93
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.72 E-value=0.15 Score=50.08 Aligned_cols=55 Identities=24% Similarity=0.413 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEE-EEecCCcEEEEEEEEeccCCC
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~-V~t~~g~~~~ARlVIDA~G~~ 93 (417)
..|-+.|.+.+.+.|++|+.+++|++|..++++|+ |.+ +|++++|+.||-|.|..
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~ 251 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHA 251 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHH
Confidence 45777788888889999999999999999999887 776 47889999999998875
No 94
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.70 E-value=0.1 Score=49.78 Aligned_cols=60 Identities=17% Similarity=0.222 Sum_probs=50.7
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEE-EecCCcEEEEEEEEeccCCCchh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVL-LLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V-~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
+++..+.+++.+.+.+.|.+++.++ ++++.. .+.+.| .+.+|++++++.||.|+|+.+..
T Consensus 68 ~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 68 ITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp BCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 5788999999999999999999887 888887 666777 77677899999999999987543
No 95
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=93.63 E-value=0.18 Score=51.90 Aligned_cols=56 Identities=20% Similarity=0.233 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEEC-CeEE-EEec-CCc--EEEE-EEEEeccCCCc
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAV-LLLA-EGK--ILSS-HLIIDAMGNFS 94 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~-d~v~-V~t~-~g~--~~~A-RlVIDA~G~~S 94 (417)
.+.+.|.+++++.|++|+.+|+|+++..++ +.|+ |.+. +++ +++| |.||.|+|..|
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 899999999999999999999999999984 3332 3332 343 6999 59999999988
No 96
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=93.53 E-value=0.14 Score=53.65 Aligned_cols=59 Identities=14% Similarity=0.158 Sum_probs=52.3
Q ss_pred cChHHHHHHHHHHHhhcCc--EEEcCceEEEEEEECC--eEEEEecCCcEEEEEEEEeccCCC
Q 014843 35 REPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg--~i~~~t~v~~i~~~~d--~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
.++..+.+++.+.+.+.|. .+..+++|+++...++ .|.|++.+|++++++.||-|+|..
T Consensus 84 ~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 84 ASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPL 146 (545)
T ss_dssp CBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSC
T ss_pred CCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 6789999999999988876 7899999999998765 789999888899999999999964
No 97
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=93.35 E-value=0.18 Score=49.42 Aligned_cols=61 Identities=16% Similarity=0.209 Sum_probs=53.2
Q ss_pred ChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 36 EPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 36 dr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
.+..+.+.+.+.+.+.|.+++.++++++++..++++.|.+.+|+++.+..||-|.|..+..
T Consensus 185 ~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 185 LHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred cCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 3556778888888899999999999999999888888888788899999999999987653
No 98
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.34 E-value=0.16 Score=53.81 Aligned_cols=61 Identities=15% Similarity=0.196 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhhcC-cEEEcCceEEEEEEECCe---EEEE-ecCCc--EEEEEEEEeccCCCchhhh
Q 014843 38 AKLIEIVKKRFISLG-GVIFEGYSVSSICTYENA---AVLL-LAEGK--ILSSHLIIDAMGNFSPVVK 98 (417)
Q Consensus 38 ~~L~~~L~~ka~~~G-g~i~~~t~v~~i~~~~d~---v~V~-t~~g~--~~~ARlVIDA~G~~Spiar 98 (417)
..+...|.+++.+.| ++++.++.|+++..+++. +++. +.+|+ +++|+.||.|+|..|.+-+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~ 201 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYR 201 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSS
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccccc
Confidence 578999999999988 999999999999998774 3333 24565 7999999999999987743
No 99
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=92.85 E-value=0.17 Score=47.46 Aligned_cols=60 Identities=12% Similarity=0.045 Sum_probs=51.3
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
+++..+.+++.+.+.+.|.+++.++ ++++...++.+.| +.++.+++++.||.|+|+.+.+
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 59 LTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 5778899999999999999999886 9999888888888 5567889999999999987543
No 100
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=92.26 E-value=0.44 Score=50.84 Aligned_cols=59 Identities=14% Similarity=0.216 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeE---EEEe-cCCc--EEEEEEEEeccCCCchh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA---VLLL-AEGK--ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v---~V~t-~~g~--~~~ARlVIDA~G~~Spi 96 (417)
..+...|.+++.+.|++|++++.|+++..+++.+ ++.. .+|+ .++|+.||-|+|..|.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 4889999999999999999999999999886643 3332 3564 69999999999998864
No 101
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=92.11 E-value=0.22 Score=49.78 Aligned_cols=61 Identities=7% Similarity=0.001 Sum_probs=50.2
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEE---CCeE--EEEecCCc----EEEEEEEEeccCCCch
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTY---ENAA--VLLLAEGK----ILSSHLIIDAMGNFSP 95 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~---~d~v--~V~t~~g~----~~~ARlVIDA~G~~Sp 95 (417)
..+..+.+++...+.+.|.++..+++|++++.. ++.| .|++.+|. +++++.||.|+|+.+.
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 124 PCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTPR 193 (463)
T ss_dssp CBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEEC
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCCCC
Confidence 467889999999998888999999999999887 4443 67666654 8999999999998543
No 102
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=91.82 E-value=0.54 Score=49.61 Aligned_cols=59 Identities=14% Similarity=0.223 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEE-CCeE---EEEe-cCCc--EEEEEEEEeccCCCchh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTY-ENAA---VLLL-AEGK--ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~-~d~v---~V~t-~~g~--~~~ARlVIDA~G~~Spi 96 (417)
..+...|.+++.+.|++|+++++|+++..+ ++.+ ++.. .+|+ +++|+.||.|+|..|..
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 578899999999999999999999999986 4432 3332 3564 69999999999998764
No 103
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.68 E-value=0.26 Score=46.15 Aligned_cols=61 Identities=16% Similarity=0.159 Sum_probs=53.2
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEec---CCcEEEEEEEEeccCCCch
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~---~g~~~~ARlVIDA~G~~Sp 95 (417)
.+++..+.+++.+.+.+.|.+++.++ ++++..+++.+.+.+. ++.+++++.||-|+|+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 80 GLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC
Confidence 35688999999999999999999998 9999999999998873 5678999999999998643
No 104
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=91.26 E-value=0.21 Score=50.39 Aligned_cols=54 Identities=6% Similarity=0.070 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhc--------CcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCC
Q 014843 39 KLIEIVKKRFISL--------GGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 92 (417)
Q Consensus 39 ~L~~~L~~ka~~~--------Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~ 92 (417)
.+.+.|.+++.+. |++|..+++|++|...+++++|++.+|++++|+.||-|.+.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCH
Confidence 5566666665544 67999999999999999999999988889999999999885
No 105
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=91.26 E-value=0.59 Score=46.91 Aligned_cols=59 Identities=19% Similarity=0.262 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
..+.+.+.+.+.+.|.+++.++++++++.+++++.|++.+|+++.+..||-|.|..+..
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 45667778888889999999999999999888888887778899999999999988755
No 106
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=90.32 E-value=0.66 Score=49.86 Aligned_cols=60 Identities=17% Similarity=0.230 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCe---EEEE-ecCCc--EEEEEEEEeccCCCchh
Q 014843 37 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA---AVLL-LAEGK--ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 37 r~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~---v~V~-t~~g~--~~~ARlVIDA~G~~Spi 96 (417)
...+...|.+++.+.|++|++++.|+++..+++. +++. +.+|+ .++|+.||-|+|..+.+
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 3578999999999999999999999999987663 3333 24565 59999999999998754
No 107
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=89.95 E-value=0.29 Score=49.23 Aligned_cols=62 Identities=16% Similarity=0.129 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchhhh
Q 014843 37 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVK 98 (417)
Q Consensus 37 r~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spiar 98 (417)
...+-+.|.+.+.+.|++|+.+++|++|..+++++++.+.+|++++|+.||-|.|..+...+
T Consensus 233 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~~~~ 294 (433)
T 1d5t_A 233 LGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPDRVR 294 (433)
T ss_dssp TTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGGGEE
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCccccc
Confidence 35777888888888999999999999999998887733346889999999999998876443
No 108
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=89.82 E-value=0.28 Score=51.20 Aligned_cols=61 Identities=10% Similarity=0.043 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHhh-cCcEEEcCceEEEEEE-ECC------eEE-EEec---CCc--EEEEEEEEeccCCCchhh
Q 014843 37 PAKLIEIVKKRFIS-LGGVIFEGYSVSSICT-YEN------AAV-LLLA---EGK--ILSSHLIIDAMGNFSPVV 97 (417)
Q Consensus 37 r~~L~~~L~~ka~~-~Gg~i~~~t~v~~i~~-~~d------~v~-V~t~---~g~--~~~ARlVIDA~G~~Spia 97 (417)
...+.+.|.+++.+ .|++|++++.|+++.. +++ .+. |.+. +|+ +++||.||.|+|..|.+-
T Consensus 137 g~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 211 (540)
T 1chu_A 137 GREVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVY 211 (540)
T ss_dssp -----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccccc
Confidence 45677788899988 7999999999999998 433 332 3332 464 799999999999998763
No 109
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=89.56 E-value=0.53 Score=47.83 Aligned_cols=58 Identities=19% Similarity=0.306 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
.+-+.+.+.+.+.|.+++.++++++++..++++.|.+.+|+++.+..||-|.|..+..
T Consensus 233 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 233 DLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 4566777788889999999999999999888898988888899999999999987554
No 110
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=89.48 E-value=0.78 Score=46.75 Aligned_cols=58 Identities=10% Similarity=0.273 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
.+-+.+.+.+.+.|.+++.++++++++.+++++.|.+.+|+++.+..||-|.|..+..
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 4667788888889999999999999998877888887778899999999999988654
No 111
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=88.69 E-value=0.42 Score=48.78 Aligned_cols=62 Identities=16% Similarity=0.171 Sum_probs=48.4
Q ss_pred ChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEE-EEec-CCcEEEEEEEEeccCCCchhhh
Q 014843 36 EPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA-EGKILSSHLIIDAMGNFSPVVK 98 (417)
Q Consensus 36 dr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~-V~t~-~g~~~~ARlVIDA~G~~Spiar 98 (417)
....+.+.|.+++.+.|++++++++| ++..+++.+. |.+. ++.+++|+.||.|+|..|.+-.
T Consensus 117 ~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~ 180 (472)
T 2e5v_A 117 TGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYE 180 (472)
T ss_dssp HHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSS
T ss_pred CHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCc
Confidence 35678899999998889999999999 9988877552 3322 2335789999999999987644
No 112
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=88.64 E-value=0.55 Score=46.81 Aligned_cols=53 Identities=17% Similarity=0.228 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCe-EEEEecCCcEEEEEEEEeccCC
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGN 92 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~-v~V~t~~g~~~~ARlVIDA~G~ 92 (417)
.|-+.|.+.+.+.|++|+.+++|++|+..+++ |.|++ ++++++|+.||-|.+.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPA 288 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCH
Confidence 57888888888899999999999999998887 88887 4568999999999865
No 113
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=88.50 E-value=0.12 Score=49.47 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=37.2
Q ss_pred CCCCCEEEEcCCCCCCCCccccc--hhHHHhhHHHHHHHHHHHHhC
Q 014843 218 AAFNRILQFGDASGIQSPVSFGG--FGSLTRHLGRLSTGVYEAVRG 261 (417)
Q Consensus 218 ~~~driLlvGDAAglvdPlSg~G--fGs~lR~l~rla~gI~~AL~~ 261 (417)
+.-++|.++||||+.+++++..| ||.|+.+..++|+.|.++|.+
T Consensus 281 t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~laa 326 (326)
T 3fpz_A 281 AGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFAA 326 (326)
T ss_dssp TTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred ECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 44578999999999999998766 788888877799999999864
No 114
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=88.12 E-value=0.68 Score=46.71 Aligned_cols=57 Identities=11% Similarity=0.054 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEE--CCeE-EEEecCCcEEEEEEEEeccCCCch
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTY--ENAA-VLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~--~d~v-~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
..+-+.|.+.+.+.|++++.+++|++|..+ ++++ .|.+ +|++++|+.||-|.|..++
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 467777888888899999999999999998 6665 4666 5788999999999988755
No 115
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=87.33 E-value=1.5 Score=44.10 Aligned_cols=63 Identities=14% Similarity=0.219 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch--hhhhh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP--VVKQI 100 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp--iarql 100 (417)
..+.+.+.+.+.+.|.+++.++++++++.+++.+.|.+.+|+++.+..||-|.|..+. +++.+
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~ 266 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDA 266 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhC
Confidence 4566778888888999999999999999877888888778889999999999998753 45443
No 116
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=87.13 E-value=1.4 Score=44.53 Aligned_cols=61 Identities=15% Similarity=0.190 Sum_probs=51.4
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCc-EEEEEEEEeccCCCchh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK-ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~-~~~ARlVIDA~G~~Spi 96 (417)
+|+ .+.+.+.+.+.+.|.+++.++++++++.+++++.|++.+|+ ++.+..||-|.|..+..
T Consensus 205 ~~~-~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 205 FDP-LLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp SCH-HHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred cCH-HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 444 45567778888899999999999999988888888887888 89999999999988654
No 117
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=87.02 E-value=1 Score=45.36 Aligned_cols=61 Identities=15% Similarity=0.173 Sum_probs=50.3
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCe-EEEEecCCcEEEEEEEEeccCCCchh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~-v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
+|+ .+.+.+.+.+.+.|.+++.++++++++.++++ +.|++.+|+++.+..||-|.|..+..
T Consensus 206 ~~~-~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 206 FDP-MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp SCH-HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred hhH-HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 443 46667778888899999999999999887665 77887788899999999999988665
No 118
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=86.78 E-value=0.86 Score=46.93 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCe----EEEEecCCc-EEEEEEEEeccCCCchh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENA----AVLLLAEGK-ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~----v~V~t~~g~-~~~ARlVIDA~G~~Spi 96 (417)
..+-+.+.+.+.+.|.+++.+++|++++..+++ +.|++.+|+ ++.|..||-|.|..+..
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 456677888888899999999999999987676 778887776 89999999999998765
No 119
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=86.74 E-value=1.4 Score=45.06 Aligned_cols=63 Identities=16% Similarity=0.167 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch--hhhhh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP--VVKQI 100 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp--iarql 100 (417)
..+.+.+.+.+.+.|.+++.++++++++..++.+.|.+.+|+++.+-+||-|.|..+. +++..
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~ 290 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTG 290 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHc
Confidence 5678888888899999999999999999887788888878889999999999998764 44443
No 120
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=86.72 E-value=1.4 Score=43.47 Aligned_cols=59 Identities=15% Similarity=0.300 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEE-EEecCCcEEEEEEEEeccCCCch
Q 014843 37 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 37 r~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~-V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
...+-+.+.+.+.+.|.+++.+++++++..+++.+. |.+.+|+++.+-+||-|.|..+.
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 456777888888899999999999999998877664 77878889999999999998654
No 121
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=86.61 E-value=1.3 Score=43.69 Aligned_cols=59 Identities=14% Similarity=0.190 Sum_probs=50.7
Q ss_pred hHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeE-EEEecCCcEEEEEEEEeccCCCch
Q 014843 37 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 37 r~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v-~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
...+-+.+.+.+.+.|.+++.++++++++.+++++ .|.+.+|+++.|-+||-|.|..+.
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 46677888888889999999999999998876666 577878889999999999998765
No 122
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=85.21 E-value=1.1 Score=45.16 Aligned_cols=54 Identities=17% Similarity=0.100 Sum_probs=41.8
Q ss_pred HHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC--cEEEEEEEEeccCCCchh
Q 014843 40 LIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 40 L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g--~~~~ARlVIDA~G~~Spi 96 (417)
+.+.+.+.+.+.|.+++.++.+. ++++.+.|.+.+| ++++++.||.|+|+.+.+
T Consensus 93 l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~ 148 (464)
T 2a8x_A 93 RVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSSTRL 148 (464)
T ss_dssp HHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 44455667777889999887653 4677888888777 689999999999998644
No 123
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=85.19 E-value=0.94 Score=48.22 Aligned_cols=62 Identities=18% Similarity=0.192 Sum_probs=48.0
Q ss_pred cChHHHHHHHHHHHhhc-Cc-EEEcCceEEEEEEECC---eEE-EE---ecCCc--EEEEEEEEeccCCCchh
Q 014843 35 REPAKLIEIVKKRFISL-GG-VIFEGYSVSSICTYEN---AAV-LL---LAEGK--ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~-Gg-~i~~~t~v~~i~~~~d---~v~-V~---t~~g~--~~~ARlVIDA~G~~Spi 96 (417)
++...+...|.+++.+. |+ +|++++.|+++..+++ .+. |. +.+|+ +++|+.||.|+|..|..
T Consensus 148 ~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 148 IHGESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp EEETTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 34556778888888887 99 9999999999998876 443 22 24554 69999999999998853
No 124
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=84.64 E-value=1.9 Score=42.65 Aligned_cols=43 Identities=21% Similarity=0.155 Sum_probs=37.9
Q ss_pred hcCcEEEcCceEEEEEEECCe-EEEEecCCcEEEEEEEEeccCCC
Q 014843 50 SLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 50 ~~Gg~i~~~t~v~~i~~~~d~-v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
+.|++|+.+++|++|..++++ |.|++ +|++++|+.||-|.+..
T Consensus 224 ~lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 224 ALGDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPN 267 (453)
T ss_dssp HHGGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGG
T ss_pred hcCCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHH
Confidence 347899999999999999999 98887 67789999999998864
No 125
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=83.91 E-value=2.5 Score=42.67 Aligned_cols=59 Identities=8% Similarity=0.080 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEec-C--Cc--EEEEEEEEeccCCCchh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-E--GK--ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~-~--g~--~~~ARlVIDA~G~~Spi 96 (417)
..+.+.+.+.+.+.|.+++.++++++++.+++++.|++. + |+ ++.+.+||-|.|..+..
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCC
Confidence 345667778888899999999999999988888888765 5 76 89999999999988654
No 126
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=83.89 E-value=2.6 Score=42.23 Aligned_cols=58 Identities=19% Similarity=0.096 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
..+-+.+.+.+.+.|.+++.++++++++..++++.|.+.+| ++.+..||-|.|..+..
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQL 246 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCCh
Confidence 34567778888889999999999999998888887887656 89999999999987543
No 127
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=83.83 E-value=2.7 Score=42.81 Aligned_cols=58 Identities=9% Similarity=0.132 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCe-EEEEecCCcEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~-v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
.+-+.+.+.+.+.|.+++.++++++++.++++ +.|++.+|+++.+-.||-|.|..+..
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 45667778888899999999999999887654 77887778889999999999988654
No 128
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=83.82 E-value=3 Score=38.98 Aligned_cols=60 Identities=13% Similarity=0.102 Sum_probs=47.8
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECC-eEEEEecCCcEEEEEEEEeccCCCc
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d-~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
+++..|.+..++++.+.++..+....+..+...++ ..+|.+.+|++++++-||-|+|+.+
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 57 IKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQE 117 (304)
T ss_dssp BCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEE
T ss_pred CCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcc
Confidence 67888888889999888777666667777766554 5677787889999999999999863
No 129
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=83.02 E-value=1.5 Score=44.07 Aligned_cols=55 Identities=18% Similarity=0.146 Sum_probs=41.6
Q ss_pred HHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC--cEEEEEEEEeccCCCchhh
Q 014843 40 LIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFSPVV 97 (417)
Q Consensus 40 L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g--~~~~ARlVIDA~G~~Spia 97 (417)
+.+.+.+.+.+.|.++..++.+. ++++.+.|.+.+| .+++++.||.|+|+.+.+.
T Consensus 98 l~~~~~~~~~~~gv~~~~g~~~~---~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 98 LTRGIEGLFKKNKVTYVKGYGKF---VSPSEISVDTIEGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHTCEEEESCEEE---EETTEEEECCSSSCCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 33445556667889999988654 5778888887667 6899999999999876543
No 130
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=82.48 E-value=2.3 Score=43.67 Aligned_cols=62 Identities=8% Similarity=0.035 Sum_probs=50.5
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECC--------eEEEEecCC-----cEEEEEEEEeccCCCchh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN--------AAVLLLAEG-----KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d--------~v~V~t~~g-----~~~~ARlVIDA~G~~Spi 96 (417)
..|+.+.+||..-|...+-.|..+++|++++..++ .|+|++.++ ++++||.||-|.|+...+
T Consensus 142 p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~i 216 (501)
T 4b63_A 142 PARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKM 216 (501)
T ss_dssp CBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECC
T ss_pred CCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCC
Confidence 56888999999988887778999999999987653 589987643 379999999999976444
No 131
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=81.30 E-value=2.4 Score=42.56 Aligned_cols=57 Identities=12% Similarity=0.174 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCe-EEEE-ecCCcEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLL-LAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~-v~V~-t~~g~~~~ARlVIDA~G~~Spi 96 (417)
.+.+.+.+.+.+.|.+++.++++++++.++++ +.|. +.+|+ +.+..||-|.|..+..
T Consensus 212 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 212 DMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCC
Confidence 45677788888899999999999999988776 6788 87787 9999999999987554
No 132
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=81.10 E-value=1.1 Score=44.59 Aligned_cols=52 Identities=17% Similarity=0.211 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEe---cCCcEEEEEEEEeccCCC
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL---AEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t---~~g~~~~ARlVIDA~G~~ 93 (417)
.|.+.|.+.+ |++|+.+++|++|..++++|.|++ .+|++++|+.||-|.+..
T Consensus 239 ~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~ 293 (478)
T 2ivd_A 239 VLIDALAASL---GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAH 293 (478)
T ss_dssp HHHHHHHHHH---GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHH
T ss_pred HHHHHHHHHh---hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHH
Confidence 3455555444 679999999999999888898987 567789999999998754
No 133
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=80.32 E-value=2.8 Score=41.98 Aligned_cols=52 Identities=15% Similarity=0.199 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC---cEEEEEEEEeccCC
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG---KILSSHLIIDAMGN 92 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g---~~~~ARlVIDA~G~ 92 (417)
.|-+.|.+++.+ ++|+.+++|++|+.++++|+|++.+| ++++|+.||-|...
T Consensus 240 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~ 294 (489)
T 2jae_A 240 RIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPP 294 (489)
T ss_dssp HHHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCH
T ss_pred HHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCH
Confidence 355555554432 68999999999999999999988765 58999999999864
No 134
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=80.24 E-value=2.7 Score=42.52 Aligned_cols=58 Identities=9% Similarity=0.110 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCe--EEEEecCC-cEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAEG-KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~--v~V~t~~g-~~~~ARlVIDA~G~~Spi 96 (417)
.+-+.+.+.+.+.|.+++.++++++++..+++ +.|++.+| +++.+-.||-|.|..+..
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 45667777888899999999999999887665 77887778 789999999999987654
No 135
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=80.08 E-value=2.3 Score=42.71 Aligned_cols=49 Identities=18% Similarity=0.137 Sum_probs=38.3
Q ss_pred HHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC--cE------EEEEEEEeccCCCch
Q 014843 44 VKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KI------LSSHLIIDAMGNFSP 95 (417)
Q Consensus 44 L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g--~~------~~ARlVIDA~G~~Sp 95 (417)
+.+.+.+.|.+++.++.+.. +++.++|++.+| ++ ++++.||.|+|+.++
T Consensus 102 ~~~~~~~~gv~~~~g~~~~~---~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~ 158 (478)
T 1v59_A 102 IELLFKKNKVTYYKGNGSFE---DETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVT 158 (478)
T ss_dssp HHHHHHHTTCEEEESEEEES---SSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEEC
T ss_pred HHHHHHhCCCEEEEEEEEEc---cCCeEEEEecCCCcccccccceEEeCEEEECcCCCCC
Confidence 45566678999999987652 667788887666 56 999999999998763
No 136
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=79.74 E-value=1.9 Score=42.66 Aligned_cols=58 Identities=10% Similarity=0.143 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
..+-+.+.+.+.+.|.+++.++++++++.++....|.+.+|+++.+-+||-|.|..+.
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 4566777788888999999999999998766555677878889999999999998765
No 137
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=79.66 E-value=3.2 Score=41.48 Aligned_cols=59 Identities=15% Similarity=0.227 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEec---CCcEEEEEEEEeccCCCchh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~---~g~~~~ARlVIDA~G~~Spi 96 (417)
..+.+.+.+.+.+.|.+++.++++++++.+++++.|++. +++++.+-.||-|.|..+..
T Consensus 211 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 211 KQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCccc
Confidence 345667777888899999999999999988888777653 34689999999999988654
No 138
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=79.47 E-value=3.3 Score=42.21 Aligned_cols=61 Identities=16% Similarity=0.248 Sum_probs=49.6
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCe-EEEEecCCcEEEEEEEEeccCCCchh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~-v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
+|+ .+-+.+.+.+.+.|.+++.++++++++.++++ +.|++.+|+++.+-.||-|.|..+..
T Consensus 233 ~d~-~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 233 FDE-TIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp SCH-HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred cCH-HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 444 45567777888899999999999999887654 77887778899999999999988654
No 139
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=78.82 E-value=4.5 Score=40.53 Aligned_cols=58 Identities=19% Similarity=0.178 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
..+.+.+.+.+.+.|.+++.++++++++.+++.+.|.+. +.++.+..||-|.|..+..
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 356777888888899999999999999988887778775 5689999999999988653
No 140
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=78.81 E-value=5.1 Score=40.21 Aligned_cols=59 Identities=5% Similarity=0.095 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCe-EEEEe-----cCCcEEEEEEEEeccCCCchh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLL-----AEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~-v~V~t-----~~g~~~~ARlVIDA~G~~Spi 96 (417)
..+.+.+.+.+.+.|.+++.+++++++..++++ +.|+. .+++++.+-.||-|.|..+..
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 345667778888899999999999999988776 77763 346689999999999988654
No 141
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=78.80 E-value=2.9 Score=41.72 Aligned_cols=58 Identities=17% Similarity=0.217 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEE--ECCeE-EEEecCCcEEEEEEEEeccCCCch
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICT--YENAA-VLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~--~~d~v-~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
..+-+.+.+.+.+.|.+++.++++++++. .++.+ .|.+.+|+++.+..||-|.|..+.
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcC
Confidence 34566777888889999999999999987 44454 577778889999999999997653
No 142
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=78.36 E-value=4.7 Score=41.08 Aligned_cols=61 Identities=15% Similarity=0.151 Sum_probs=49.1
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCe-EEEEecCCcE-EEEEEEEeccCCCchh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKI-LSSHLIIDAMGNFSPV 96 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~-v~V~t~~g~~-~~ARlVIDA~G~~Spi 96 (417)
+|+ .+-+.+.+.+.+.|.+++.++++++++.++++ +.|.+.+|++ +.+-.||-|.|..+..
T Consensus 215 ~d~-~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 215 FDE-SVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp SCH-HHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred cch-hhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 443 45567778888899999999999999876554 7777777877 9999999999988654
No 143
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=77.59 E-value=5.2 Score=39.87 Aligned_cols=57 Identities=19% Similarity=0.303 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEE-EEecCCcEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~-V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
.+-+.+.+.+.+.|.+++.++++++++..++.+. |.+ +|+++.+..||-|.|..+..
T Consensus 192 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 192 EFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEECC
T ss_pred hHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCCH
Confidence 4666777888889999999999999987666665 555 67889999999999987654
No 144
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=77.27 E-value=4.2 Score=40.75 Aligned_cols=58 Identities=7% Similarity=0.065 Sum_probs=46.5
Q ss_pred HHHHHHHHHH-hhcCcEEEcCceEEEEEEECCeEEEEec--CC--cEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRF-ISLGGVIFEGYSVSSICTYENAAVLLLA--EG--KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka-~~~Gg~i~~~t~v~~i~~~~d~v~V~t~--~g--~~~~ARlVIDA~G~~Spi 96 (417)
.+.+.+.+.+ .+.|.+++.++++++++.+++++.|++. +| +++.+..||-|.|..+..
T Consensus 216 ~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 216 DVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp HHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 3566777788 8899999999999999988777777754 56 579999999999988654
No 145
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=76.99 E-value=4.6 Score=43.49 Aligned_cols=58 Identities=16% Similarity=0.125 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHhhcCcEEEcCceEEEEEEEC--CeEE-EEecCCcEEEEEEEEeccCCCc
Q 014843 37 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYE--NAAV-LLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 37 r~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~--d~v~-V~t~~g~~~~ARlVIDA~G~~S 94 (417)
-..|-+.|.+.+...||+++.+++|..|.+++ +.++ |.+.+|++++|+.||-+..+.+
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp 437 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLS 437 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBC
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcC
Confidence 34566677778888999999999999999987 4343 4455689999999997555443
No 146
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=76.75 E-value=2.5 Score=45.39 Aligned_cols=62 Identities=16% Similarity=0.112 Sum_probs=48.6
Q ss_pred cChHHHHHHHHHHHhhc--CcEEEcCceEEEEEEECC---eEE---EE-ecCCc--EEEEEEEEeccCCCchh
Q 014843 35 REPAKLIEIVKKRFISL--GGVIFEGYSVSSICTYEN---AAV---LL-LAEGK--ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~--Gg~i~~~t~v~~i~~~~d---~v~---V~-t~~g~--~~~ARlVIDA~G~~Spi 96 (417)
+....+...|.+++.+. |++|++++.|+++..+++ .+. +. ..+|+ .++||.||.|+|-.|.+
T Consensus 163 ~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 163 INGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp EEETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 45667888899999887 999999999999998876 332 32 23453 68999999999988754
No 147
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=76.70 E-value=3.6 Score=41.15 Aligned_cols=54 Identities=15% Similarity=-0.002 Sum_probs=41.3
Q ss_pred HHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC-cEEEEEEEEeccCCCchh
Q 014843 40 LIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG-KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 40 L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g-~~~~ARlVIDA~G~~Spi 96 (417)
+.+.+.+.+.+.|.+++.++.+. ++++.+.|++.+| ++++++.||-|+|+.+..
T Consensus 93 l~~~~~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~i~~d~lViATGs~p~~ 147 (455)
T 1ebd_A 93 LTGGVEGLLKGNKVEIVKGEAYF---VDANTVRVVNGDSAQTYTFKNAIIATGSRPIE 147 (455)
T ss_dssp HHHHHHHHHHTTTCEEEESEEEE---EETTEEEEEETTEEEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHhCCCEEEEEEEEE---ccCCeEEEEeCCCcEEEEeCEEEEecCCCCCC
Confidence 44445666777899999888653 5678888988766 689999999999986543
No 148
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=75.68 E-value=3.9 Score=41.31 Aligned_cols=50 Identities=18% Similarity=0.026 Sum_probs=37.9
Q ss_pred HHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC------------cEEEEEEEEeccCCCchh
Q 014843 44 VKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG------------KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 44 L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g------------~~~~ARlVIDA~G~~Spi 96 (417)
+.+.+.+.|.+++.++.+. .+++.+.|++.+| .+++++.||-|+|+.+.+
T Consensus 101 ~~~~~~~~gv~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 101 LAGMAKSRKVDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTK 162 (482)
T ss_dssp HHHHHHHTTCEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHhCCcEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCC
Confidence 4456667889999888654 5677888876555 579999999999998543
No 149
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=75.25 E-value=2.9 Score=45.79 Aligned_cols=42 Identities=14% Similarity=0.042 Sum_probs=38.0
Q ss_pred hcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccC
Q 014843 50 SLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMG 91 (417)
Q Consensus 50 ~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G 91 (417)
..|..|+.+++|++|+..+++|+|++.+|++++|+.||-|..
T Consensus 541 a~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P 582 (776)
T 4gut_A 541 AEGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVP 582 (776)
T ss_dssp HTTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCC
T ss_pred HhCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCC
Confidence 357899999999999999999999998888999999999984
No 150
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=75.06 E-value=3.3 Score=42.13 Aligned_cols=40 Identities=13% Similarity=0.156 Sum_probs=35.4
Q ss_pred cEEEcCceEEEEEEE-CCeEEEEecCCcEEEEEEEEeccCC
Q 014843 53 GVIFEGYSVSSICTY-ENAAVLLLAEGKILSSHLIIDAMGN 92 (417)
Q Consensus 53 g~i~~~t~v~~i~~~-~d~v~V~t~~g~~~~ARlVIDA~G~ 92 (417)
++|+.+++|++|... +++|.|++.+|++++|+.||-|.+.
T Consensus 215 ~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~ 255 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQ 255 (516)
T ss_dssp GGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCH
T ss_pred CEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCH
Confidence 579999999999986 6789999988888999999999864
No 151
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=74.46 E-value=4.8 Score=40.66 Aligned_cols=58 Identities=10% Similarity=0.027 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecC----CcEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE----GKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~----g~~~~ARlVIDA~G~~Spi 96 (417)
.+-+.+.+.+.+.|.+++.++++++++.+++++.|++.+ |+++.+-.||-|.|..+..
T Consensus 227 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 227 DLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp HHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred HHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 455677777888999999999999999888887777655 6678999999999988665
No 152
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=74.33 E-value=9.8 Score=38.36 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecC---C--cEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE---G--KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~---g--~~~~ARlVIDA~G~~Spi 96 (417)
.+.+.+.+.+.+.|.+++.++++++++..++++.|...+ | +++.+-.||-|.|..+..
T Consensus 240 ~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 240 EVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 456667777888999999999999999999988877542 4 579999999999987654
No 153
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=74.23 E-value=5.8 Score=40.56 Aligned_cols=58 Identities=19% Similarity=0.269 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEE-------------------CCeEEEEecCCcEEEEEEEEeccCCCch
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTY-------------------ENAAVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~-------------------~d~v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
..+-+.+.+.+.+.|.+++.++++++++.. ++++.|...+|+++.+-.||-|.|..+.
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccc
Confidence 456677778888899999999999999883 5677777777889999999999998764
No 154
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=73.49 E-value=3.8 Score=40.04 Aligned_cols=45 Identities=7% Similarity=-0.057 Sum_probs=37.2
Q ss_pred HhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCC
Q 014843 48 FISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 48 a~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
+...+.+|+.+++|++|..++++|+|++.+| +++|+.||-|.+..
T Consensus 213 ~~~l~~~v~~~~~V~~i~~~~~~v~v~~~~g-~~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 213 NATLEHPAERNVDITRITREDGKVHIHTTDW-DRESDVLVLTVPLE 257 (424)
T ss_dssp HHHSSSCCBCSCCEEEEECCTTCEEEEESSC-EEEESEEEECSCHH
T ss_pred HHhhcceEEcCCEEEEEEEECCEEEEEECCC-eEEcCEEEECCCHH
Confidence 3345568899999999999999999988766 48999999998764
No 155
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=72.53 E-value=7.4 Score=35.67 Aligned_cols=58 Identities=10% Similarity=0.039 Sum_probs=47.4
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEEC--CeEEEEe-cCCcEEEEEEEEeccCCCc
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE--NAAVLLL-AEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~--d~v~V~t-~~g~~~~ARlVIDA~G~~S 94 (417)
.+++..+..++.+.+.+.|.++..+ +++++ .++ +.+.|.. .++ +++++.||-|+|+..
T Consensus 58 ~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 58 VMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp CBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEE
T ss_pred CCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCC
Confidence 3678899999999999999998887 89999 777 6788422 234 899999999999853
No 156
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=72.24 E-value=5.9 Score=39.12 Aligned_cols=54 Identities=20% Similarity=0.342 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
..+.+.+.+.+.+.|.+++.++++++++ ++ .|++.+|+++.+..||-|.|..+.
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCCCcc
Confidence 4566778888888999999999999998 34 566667889999999999998754
No 157
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=72.23 E-value=5.4 Score=40.01 Aligned_cols=58 Identities=14% Similarity=0.112 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEE--ECCeEEEEec-----CCcEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICT--YENAAVLLLA-----EGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~--~~d~v~V~t~-----~g~~~~ARlVIDA~G~~Spi 96 (417)
.+.+.+.+.+.+.|.+++.+++++++.. +++.+.|.+. +++++.+-.||-|.|..+..
T Consensus 225 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 225 EVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 4667778888889999999999999987 5566767654 34679999999999987654
No 158
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=71.30 E-value=7 Score=39.10 Aligned_cols=58 Identities=22% Similarity=0.355 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEec-CC--cEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-EG--KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~-~g--~~~~ARlVIDA~G~~Spi 96 (417)
.+-+.+.+.+.+.|.+++.++++++++.+++++.|+.. +| +++.+-.||-|.|..+..
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 213 DVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp HHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 45667777888899999999999999887777777754 45 579999999999987654
No 159
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=70.99 E-value=9.7 Score=38.12 Aligned_cols=58 Identities=16% Similarity=0.140 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC---cEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG---KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g---~~~~ARlVIDA~G~~Spi 96 (417)
.+-+.+.+.+.+.|.+++.++++++++.+++++.|...++ +++.+-.||-|.|..+..
T Consensus 222 ~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 222 QVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp HHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 4566777778889999999999999999888888776543 579999999999987544
No 160
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=70.76 E-value=4.2 Score=40.49 Aligned_cols=56 Identities=11% Similarity=0.141 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeE-EEEecCCcEEEEEEEEeccCCCch
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v-~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
..+.+.+.+.+.+.|.+++.++++++++.+ +.+ .|.+ +++++.+..||-|.|..+.
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 456778888888899999999999999865 433 4555 5678999999999998764
No 161
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=69.66 E-value=8.6 Score=35.55 Aligned_cols=56 Identities=11% Similarity=0.114 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEE-EEecC----C--cEEEEEEEEeccCCC
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAE----G--KILSSHLIIDAMGNF 93 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~-V~t~~----g--~~~~ARlVIDA~G~~ 93 (417)
..+.+.+.+++.+.|.+++.+++++++..+++++. |...+ | +++.+..||-|.|..
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 45666777888889999999999999987765432 43322 3 467777788777755
No 162
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=69.27 E-value=10 Score=35.86 Aligned_cols=55 Identities=15% Similarity=-0.005 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhhcC-cEEEcCceEEEEEEECCeEEEEecCCcEEEE-EEEEeccCCC
Q 014843 39 KLIEIVKKRFISLG-GVIFEGYSVSSICTYENAAVLLLAEGKILSS-HLIIDAMGNF 93 (417)
Q Consensus 39 ~L~~~L~~ka~~~G-g~i~~~t~v~~i~~~~d~v~V~t~~g~~~~A-RlVIDA~G~~ 93 (417)
.+.+.+.+...+.| .+++.++++.+++.+++++.|++.+|+++.+ -.||-|.|..
T Consensus 215 ~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 215 YTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBC
T ss_pred HHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccC
Confidence 34466666667776 9999999999998888887777766655443 4455566654
No 163
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=69.15 E-value=5.8 Score=39.61 Aligned_cols=59 Identities=14% Similarity=0.158 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEec---CC--cEEEEEEEEeccCCCchh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EG--KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~---~g--~~~~ARlVIDA~G~~Spi 96 (417)
..+.+.+.+.+.+.|.+++.++++++++.+++++.|+.. +| +++.+-.||-|.|..+..
T Consensus 218 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 218 AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp HHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 345677788888899999999999999877666776653 34 579999999999988654
No 164
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=68.94 E-value=10 Score=37.94 Aligned_cols=49 Identities=22% Similarity=0.260 Sum_probs=37.2
Q ss_pred HHHHHhhcCcEEEcCceEEEEEEECCeEEEEecC-C-cEEEEEEEEeccCCCch
Q 014843 44 VKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE-G-KILSSHLIIDAMGNFSP 95 (417)
Q Consensus 44 L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~-g-~~~~ARlVIDA~G~~Sp 95 (417)
+.+.+.+.|.++..++.+ .++++.+.|++.+ + ++++++.||.|+|+.+.
T Consensus 103 ~~~~~~~~gv~~~~g~~~---~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~ 153 (474)
T 1zmd_A 103 IAHLFKQNKVVHVNGYGK---ITGKNQVTATKADGGTQVIDTKNILIATGSEVT 153 (474)
T ss_dssp HHHHHHHTTCEEEESEEE---EEETTEEEEECTTSCEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHhCCCEEEEEEEE---EecCCEEEEEecCCCcEEEEeCEEEECCCCCCC
Confidence 455666788999888653 2467888888766 4 57999999999998753
No 165
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=66.66 E-value=11 Score=34.64 Aligned_cols=59 Identities=17% Similarity=0.196 Sum_probs=47.3
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCc
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
++...|...+.+.+.+.|.++... .+.......+...+.+.++.+++++-||-|+|+.+
T Consensus 63 i~~~~l~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 63 IDGNELMMNMRTQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATA 121 (314)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEcccccc
Confidence 577888899999999988887755 46666666677777777788999999999999753
No 166
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=64.38 E-value=11 Score=38.04 Aligned_cols=57 Identities=12% Similarity=0.079 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
..+.+.+.+.+.+.|.+++.++++++++.++....|.+ ++.++.+..||-|.|..+.
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVET-DKGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEE-TTEEEECSEEEECSCEEES
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEE-CCCEEEcCEEEECcCCCcC
Confidence 34667788888889999999999999986533334555 4568999999999998753
No 167
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=63.81 E-value=3.2 Score=41.96 Aligned_cols=58 Identities=19% Similarity=0.027 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHhh-cCcEEEcCceEEEEEEECCeEEEEe-cCCc--EEEEEEEEeccCCCc
Q 014843 37 PAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNFS 94 (417)
Q Consensus 37 r~~L~~~L~~ka~~-~Gg~i~~~t~v~~i~~~~d~v~V~t-~~g~--~~~ARlVIDA~G~~S 94 (417)
.+.+.....+.+.+ .|.+++.+++|+.+...++.+.|.+ .+|+ +++++.||-|+|+.+
T Consensus 91 ~~~l~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 91 TEKLIARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp GGGGBSSCHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHHhhhcCHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcc
Confidence 33333333444533 5899999999999988888888876 3465 799999999999764
No 168
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=63.80 E-value=8.8 Score=40.77 Aligned_cols=44 Identities=9% Similarity=0.033 Sum_probs=37.1
Q ss_pred HhhcCcEEEcCceEEEEEEECCeEEEEecC------CcEEEEEEEEeccC
Q 014843 48 FISLGGVIFEGYSVSSICTYENAAVLLLAE------GKILSSHLIIDAMG 91 (417)
Q Consensus 48 a~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~------g~~~~ARlVIDA~G 91 (417)
+...+..|..+++|++|...+++|.|++.+ +++++|+.||=|..
T Consensus 406 ~La~~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP 455 (662)
T 2z3y_A 406 ALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLP 455 (662)
T ss_dssp HHTTTCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCC
T ss_pred HHHhcCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCC
Confidence 334467899999999999999999998755 56899999998876
No 169
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=63.61 E-value=19 Score=35.60 Aligned_cols=43 Identities=16% Similarity=0.042 Sum_probs=36.8
Q ss_pred cCcEEEcCceEEEEEEECCeEEEEec---CCc--EEEEEEEEeccCCC
Q 014843 51 LGGVIFEGYSVSSICTYENAAVLLLA---EGK--ILSSHLIIDAMGNF 93 (417)
Q Consensus 51 ~Gg~i~~~t~v~~i~~~~d~v~V~t~---~g~--~~~ARlVIDA~G~~ 93 (417)
.|.+++.++++++++..++++.|++. +|+ ++.+-+||-|.|..
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 58899999999999999999888765 565 48899999999976
No 170
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=63.46 E-value=10 Score=37.84 Aligned_cols=40 Identities=8% Similarity=0.033 Sum_probs=34.5
Q ss_pred EEEcCceEEEEEEECCeEEEEecCCc----EEEEEEEEeccCCC
Q 014843 54 VIFEGYSVSSICTYENAAVLLLAEGK----ILSSHLIIDAMGNF 93 (417)
Q Consensus 54 ~i~~~t~v~~i~~~~d~v~V~t~~g~----~~~ARlVIDA~G~~ 93 (417)
+|+.+++|++|..++++|.|++.+|+ +++|+.||-|.+..
T Consensus 254 ~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 254 KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 79999999999999999999876654 58999999998753
No 171
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=61.68 E-value=14 Score=36.81 Aligned_cols=48 Identities=17% Similarity=0.122 Sum_probs=37.2
Q ss_pred HHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC--cEEEEEEEEeccCCCc
Q 014843 44 VKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFS 94 (417)
Q Consensus 44 L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g--~~~~ARlVIDA~G~~S 94 (417)
+.+.+.+.|.++..++.+. ++++.+.|.+.+| .+++++.||-|+|+.+
T Consensus 99 ~~~~~~~~~v~~~~g~~~~---i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p 148 (468)
T 2qae_A 99 VEYLFKKNKVTYYKGEGSF---ETAHSIRVNGLDGKQEMLETKKTIIATGSEP 148 (468)
T ss_dssp HHHHHHHHTCEEEEEEEEE---EETTEEEEEETTSCEEEEEEEEEEECCCEEE
T ss_pred HHHHHHhCCCEEEEEEEEE---eeCCEEEEEecCCceEEEEcCEEEECCCCCc
Confidence 4555666788998887542 5678888988777 6899999999999864
No 172
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=61.15 E-value=15 Score=34.82 Aligned_cols=55 Identities=15% Similarity=0.052 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCe---EEEEecCC--cEEEEEEEEeccCCC
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENA---AVLLLAEG--KILSSHLIIDAMGNF 93 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~---v~V~t~~g--~~~~ARlVIDA~G~~ 93 (417)
.+.+.+.+...+.|.+++.+++++++..+++. +++.+.+| +++.+..||-|.|..
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 45566777777888999999999999888664 33332355 467888888887755
No 173
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=60.39 E-value=3.4 Score=40.80 Aligned_cols=55 Identities=13% Similarity=0.109 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCC
Q 014843 37 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 37 r~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
.+.+.....+.+.+.|.+++.+++|+++..++. .|++.+|+++.++.||-|+|+.
T Consensus 61 ~~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 61 IDDILIKKNDWYEKNNIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp GGGTBSSCHHHHHHTTCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred HHHccCCCHHHHHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCCC
Confidence 334433444556678899999999999987665 4556678899999999999975
No 174
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=59.75 E-value=6.7 Score=39.05 Aligned_cols=48 Identities=17% Similarity=0.283 Sum_probs=37.9
Q ss_pred HHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch
Q 014843 46 KRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 46 ~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
+.+.+.|.+++.+++|+.+...+. .|++.+|++++++.||-|+|+.+.
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGGRPR 115 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEEC
T ss_pred HHHHhCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCCCcc
Confidence 344567899999999999887654 455566788999999999998653
No 175
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=59.07 E-value=26 Score=36.52 Aligned_cols=63 Identities=11% Similarity=0.082 Sum_probs=51.6
Q ss_pred eeeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCc
Q 014843 31 ILEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 31 ~~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
++..+|++ +-+.+.+.+.+.|..++.++.+..++..++.+.|.+.++.++.+-.|+-|.|-.+
T Consensus 257 ~L~~~D~e-i~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 257 VLRGFDQQ-CAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp SSTTSCHH-HHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred cccccchh-HHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccC
Confidence 44446765 4556677788899999999999999999999999987777888888888999763
No 176
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=58.96 E-value=7.1 Score=38.86 Aligned_cols=52 Identities=12% Similarity=0.119 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccC
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMG 91 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G 91 (417)
..|-+.|.+++.+.|++|..+++|++|..+++.+ ++.+|++++|..||-++-
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v--~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTV--TLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTEE--EETTSCEEEEEEEEECSC
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCEE--EEcCCCEEECCEEEECCC
Confidence 4566777777788899999999999998877654 456789999999996654
No 177
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=58.34 E-value=25 Score=35.19 Aligned_cols=58 Identities=10% Similarity=0.048 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCe--EEEEecC---C----cEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAE---G----KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~--v~V~t~~---g----~~~~ARlVIDA~G~~Spi 96 (417)
.+.+.+.+.+.+.|.+++.++++++++..+++ +.|.+.+ | +++.+-.||-|.|..+..
T Consensus 229 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 229 MISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCC
Confidence 45667777888899999999999999987776 5566543 2 578999999999987544
No 178
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=58.20 E-value=11 Score=34.90 Aligned_cols=52 Identities=15% Similarity=-0.015 Sum_probs=36.5
Q ss_pred HHHHHHHhhc-CcEEEcCceEEEEEEECCeEE-EEecC-----CcEEEEEEEEeccCCC
Q 014843 42 EIVKKRFISL-GGVIFEGYSVSSICTYENAAV-LLLAE-----GKILSSHLIIDAMGNF 93 (417)
Q Consensus 42 ~~L~~ka~~~-Gg~i~~~t~v~~i~~~~d~v~-V~t~~-----g~~~~ARlVIDA~G~~ 93 (417)
..+.+++.+. |.+++.++++++++.+++++. |.+.+ ++++.+-+||-|.|..
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 4455666665 999999999999988776443 44332 3467788888777754
No 179
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=57.83 E-value=20 Score=36.04 Aligned_cols=57 Identities=11% Similarity=0.041 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCe-EEEEecCCc-----EEEEEEEEeccCCCch
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGK-----ILSSHLIIDAMGNFSP 95 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~-v~V~t~~g~-----~~~ARlVIDA~G~~Sp 95 (417)
.+-+.+.+.+.+.|.+++.++++++++..+++ +.|+..++. ++.+-.||-|.|..+.
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 228 QMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp HHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 45667777888899999999999999887664 556654432 7899999999998643
No 180
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=55.51 E-value=8.4 Score=38.60 Aligned_cols=56 Identities=20% Similarity=0.182 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC--cEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g--~~~~ARlVIDA~G~~Spi 96 (417)
.+.+.+.+.+.+.|.+++.++++++++. +.+.|++.+| +++.+-.||-|.|..+..
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 213 ELTAPVAESLKKLGIALHLGHSVEGYEN--GCLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp HHHHHHHHHHHHHTCEEETTCEEEEEET--TEEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEe--CCEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 4566777788889999999999999976 3466664445 589999999999987654
No 181
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=55.07 E-value=4.5 Score=40.38 Aligned_cols=59 Identities=14% Similarity=0.091 Sum_probs=43.4
Q ss_pred ChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEec-C--CcEEEEEEEEeccCCCc
Q 014843 36 EPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-E--GKILSSHLIIDAMGNFS 94 (417)
Q Consensus 36 dr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~-~--g~~~~ARlVIDA~G~~S 94 (417)
+++.+...+.+.+.+.|.+++.++++..+...++.+.|.+. + +.+++++.||-|+|+.+
T Consensus 56 ~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 56 DPRGLFYSSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp CGGGGBSCCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred CHHHhhhcCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCc
Confidence 34444333445566788999999999999887888887652 2 35799999999999764
No 182
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=53.88 E-value=8.8 Score=39.02 Aligned_cols=55 Identities=13% Similarity=0.013 Sum_probs=43.1
Q ss_pred HHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch--hhhhh
Q 014843 46 KRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP--VVKQI 100 (417)
Q Consensus 46 ~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp--iarql 100 (417)
+++.+.|++++.++++++++.++....|.+.+|+++.+.+||-|.|..+. +++++
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~ 321 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQA 321 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHT
T ss_pred HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhc
Confidence 56677899999999999998655444566767889999999999998765 44543
No 183
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=53.84 E-value=12 Score=37.23 Aligned_cols=47 Identities=21% Similarity=0.166 Sum_probs=35.1
Q ss_pred HHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCc
Q 014843 44 VKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 44 L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
+.+.+.+.|.++..++.+. ++++.+.|++ +|++++++.||-|+|+.+
T Consensus 95 ~~~~~~~~~v~~~~g~~~~---i~~~~~~v~~-~g~~~~~d~lviAtG~~p 141 (455)
T 2yqu_A 95 VEFLFKKNGIARHQGTARF---LSERKVLVEE-TGEELEARYILIATGSAP 141 (455)
T ss_dssp HHHHHHHHTCEEEESCEEE---SSSSEEEETT-TCCEEEEEEEEECCCEEE
T ss_pred HHHHHHhCCCEEEEeEEEE---ecCCeEEEee-CCEEEEecEEEECCCCCC
Confidence 3455666788998887542 4566777776 678899999999999864
No 184
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=52.58 E-value=29 Score=32.21 Aligned_cols=56 Identities=9% Similarity=0.017 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEec---CC--cEEEEEEEEeccCCC
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EG--KILSSHLIIDAMGNF 93 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~---~g--~~~~ARlVIDA~G~~ 93 (417)
..+.+.+.+.+.+.|.+++.+++++++..++....|... +| +++.+-.||-|.|..
T Consensus 191 ~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 191 EASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 345666777777789999999999999874332234332 45 467777777777755
No 185
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=52.45 E-value=6.8 Score=38.90 Aligned_cols=59 Identities=15% Similarity=0.133 Sum_probs=44.1
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
.+++.+...+.+.+.+.|.++. .++|+++..+.+ .|++.+|+++.+..||-|+|+.+..
T Consensus 56 ~~~~~~~~~l~~~~~~~gv~~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 56 KERDDIAFPIRHYVERKGIHFI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPKLAF 114 (437)
T ss_dssp SCHHHHEEECHHHHHTTTCEEE-CSCEEEEETTTT--EEEETTSCEEECSEEEECCCCEECG
T ss_pred cCHHHHHHHHHHHHHHCCCEEE-EeEEEEEEcCCC--EEEECCCCEEECCEEEECCCCCcCc
Confidence 4555555566777777888887 468988876655 5666678889999999999997543
No 186
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=52.25 E-value=3.8 Score=41.56 Aligned_cols=50 Identities=22% Similarity=0.216 Sum_probs=38.9
Q ss_pred HHHHhhcCcEEEcCceEEEEEEECCeEEEE-ecCCcEEEEEEEEeccCCCc
Q 014843 45 KKRFISLGGVIFEGYSVSSICTYENAAVLL-LAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 45 ~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~-t~~g~~~~ARlVIDA~G~~S 94 (417)
.+.+.+.|.+++.+++++.+...++.+.|. ..++.+++++.||-|+|+.+
T Consensus 99 ~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 99 KEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp HHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEE
T ss_pred HHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCc
Confidence 344556789999999999998888888776 32235799999999999764
No 187
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=51.98 E-value=16 Score=36.96 Aligned_cols=56 Identities=14% Similarity=0.198 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeE-EEEecCCcEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v-~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
.+.+.+.+.+.+.|.+++.++++++++. ++.+ .|.+ +|+++.+-.||-|.|..+..
T Consensus 237 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~ 293 (490)
T 2bc0_A 237 DLTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRPNT 293 (490)
T ss_dssp HHHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCcCh
Confidence 4566777888889999999999999985 3433 3555 67789999999999987543
No 188
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=51.68 E-value=6.4 Score=39.15 Aligned_cols=51 Identities=16% Similarity=0.209 Sum_probs=39.5
Q ss_pred HHHHHhhcCcEEEcCceEEEEEEECCeEEEEe-cCCc--EEEEEEEEeccCCCc
Q 014843 44 VKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNFS 94 (417)
Q Consensus 44 L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t-~~g~--~~~ARlVIDA~G~~S 94 (417)
+.+.+.+.|.+++.+++++.+...++.+.+.+ .+|+ +++++.||-|+|+.+
T Consensus 62 ~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 62 TGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp CHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred CHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCc
Confidence 34455567899999999999988888887765 3454 489999999999763
No 189
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=50.96 E-value=33 Score=34.71 Aligned_cols=57 Identities=19% Similarity=0.128 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEec--CC--cEEEEEEEEeccCCCchh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA--EG--KILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~--~g--~~~~ARlVIDA~G~~Spi 96 (417)
.+-+.+.+.+.+. .+++.+++++.++..++++.|+.. +| +++.+-.||-|.|..+..
T Consensus 216 ~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 216 EMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANV 276 (492)
T ss_dssp HHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESC
T ss_pred HHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCC
Confidence 4455566666666 899999999999998888888764 56 689999999999987543
No 190
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=50.27 E-value=17 Score=40.21 Aligned_cols=42 Identities=10% Similarity=0.030 Sum_probs=35.4
Q ss_pred hcCcEEEcCceEEEEEEECCeEEEEecC------CcEEEEEEEEeccC
Q 014843 50 SLGGVIFEGYSVSSICTYENAAVLLLAE------GKILSSHLIIDAMG 91 (417)
Q Consensus 50 ~~Gg~i~~~t~v~~i~~~~d~v~V~t~~------g~~~~ARlVIDA~G 91 (417)
..+..|+.+++|++|...+++|.|++.+ +++++|+.||=|.-
T Consensus 579 a~~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvP 626 (852)
T 2xag_A 579 AEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLP 626 (852)
T ss_dssp TTTCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCC
T ss_pred HhCCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCC
Confidence 3456899999999999999999998754 46899999998864
No 191
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=49.60 E-value=26 Score=31.99 Aligned_cols=50 Identities=10% Similarity=-0.017 Sum_probs=35.1
Q ss_pred HHHHHhh-cCcEEEcCceEEEEEEECCeEEEEecC---Cc--EEEEEEEEeccCCC
Q 014843 44 VKKRFIS-LGGVIFEGYSVSSICTYENAAVLLLAE---GK--ILSSHLIIDAMGNF 93 (417)
Q Consensus 44 L~~ka~~-~Gg~i~~~t~v~~i~~~~d~v~V~t~~---g~--~~~ARlVIDA~G~~ 93 (417)
+.+++.+ .|.+++.+++++++..++....|.+.+ |+ ++.+-.||-|.|..
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 250 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFD 250 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCC
Confidence 4455555 489999999999998775544455433 54 67788888777755
No 192
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=49.53 E-value=17 Score=37.42 Aligned_cols=56 Identities=13% Similarity=0.168 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
..+.+.+.+.+.+.|.++..++++++++..+++ |.+.+|+++.+-.||-|.|..+.
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccCCCCC
Confidence 345677778888899999999999999776564 44557889999999999998754
No 193
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=49.37 E-value=5 Score=38.97 Aligned_cols=47 Identities=11% Similarity=-0.114 Sum_probs=39.9
Q ss_pred HHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCC
Q 014843 47 RFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 47 ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
...+.|.++..++.+..++.+++...|.+.+|+++.+-+||-|.|..
T Consensus 211 ~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~ 257 (401)
T 3vrd_B 211 GTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQR 257 (401)
T ss_dssp TSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEE
T ss_pred HHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcC
Confidence 33568899999999999999999888998889999998888777654
No 194
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=48.03 E-value=20 Score=32.70 Aligned_cols=45 Identities=16% Similarity=0.042 Sum_probs=31.6
Q ss_pred hhcCcEEEcCceEEEEEEECCeE---EEEecCCc--EEEEEEEEeccCCC
Q 014843 49 ISLGGVIFEGYSVSSICTYENAA---VLLLAEGK--ILSSHLIIDAMGNF 93 (417)
Q Consensus 49 ~~~Gg~i~~~t~v~~i~~~~d~v---~V~t~~g~--~~~ARlVIDA~G~~ 93 (417)
.+.|.+++.++++.++..+++.+ ++.+.+|+ ++.+..||-|.|..
T Consensus 194 ~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred hcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 46889999999999998887543 33333554 56677777776644
No 195
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=47.59 E-value=27 Score=31.51 Aligned_cols=50 Identities=12% Similarity=0.021 Sum_probs=35.4
Q ss_pred ecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhCCC
Q 014843 207 IFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDF 263 (417)
Q Consensus 207 ~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~~~ 263 (417)
.+.+ +....+..++|.++||+++. | .....++..+..+|..|...|...+
T Consensus 246 ~i~v--d~~~~t~~~~vya~GD~~~~--~---~~~~~A~~~g~~aa~~i~~~l~~~~ 295 (297)
T 3fbs_A 246 TIVT--DPMKQTTARGIFACGDVARP--A---GSVALAVGDGAMAGAAAHRSILFPE 295 (297)
T ss_dssp EECC--CTTCBCSSTTEEECSGGGCT--T---CCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred eEEe--CCCCccCCCCEEEEeecCCc--h---HHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 4555 22345667899999999986 3 3466778877778888888887653
No 196
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=47.56 E-value=14 Score=35.96 Aligned_cols=52 Identities=13% Similarity=0.195 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCC
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
..+.+.+.+.+.+.|.++..++++++++ +++ |.+.+|+++.+-+||-|.|..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~--~~~--v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIR--EHE--IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEC--SSE--EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEEC--CCe--EEECCCCEEeeeEEEECCCCC
Confidence 4677778888888999999999999875 344 445577788888888777754
No 197
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=47.02 E-value=18 Score=38.47 Aligned_cols=55 Identities=9% Similarity=0.117 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEec---CCcEEEEEEEEeccCCCc
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~---~g~~~~ARlVIDA~G~~S 94 (417)
..+...+.+.+.+.|.+++.++++++++ ++++.|... +++++.+-.||-|.|..+
T Consensus 567 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~--~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p 624 (690)
T 3k30_A 567 TFEVNRIQRRLIENGVARVTDHAVVAVG--AGGVTVRDTYASIERELECDAVVMVTARLP 624 (690)
T ss_dssp GTCHHHHHHHHHHTTCEEEESEEEEEEE--TTEEEEEETTTCCEEEEECSEEEEESCEEE
T ss_pred chhHHHHHHHHHHCCCEEEcCcEEEEEE--CCeEEEEEccCCeEEEEECCEEEECCCCCC
Confidence 3445677778888999999999999886 466666532 345789999999998764
No 198
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=46.91 E-value=17 Score=37.33 Aligned_cols=60 Identities=18% Similarity=0.181 Sum_probs=44.7
Q ss_pred eeeccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEe--cCC----cEEEEEEEEeccCCC
Q 014843 31 ILEFREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEG----KILSSHLIIDAMGNF 93 (417)
Q Consensus 31 ~~~~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t--~~g----~~~~ARlVIDA~G~~ 93 (417)
|+..+| +++-+++.+.+.+.|.+++.++.++.++ ++++++.+ .+| +++.+.+||=|.|..
T Consensus 266 il~~~~-~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 266 VLNMFE-KKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp SSTTSC-HHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred cccCCC-HHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 333343 5778888888999999999999999874 56666543 344 368888899888865
No 199
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=45.41 E-value=34 Score=34.75 Aligned_cols=50 Identities=20% Similarity=0.214 Sum_probs=36.0
Q ss_pred HHHhhcC-cEEEcCceEEEEEEECCe--E-EEEec--CC-----cEEEEEEEEeccCCC-ch
Q 014843 46 KRFISLG-GVIFEGYSVSSICTYENA--A-VLLLA--EG-----KILSSHLIIDAMGNF-SP 95 (417)
Q Consensus 46 ~ka~~~G-g~i~~~t~v~~i~~~~d~--v-~V~t~--~g-----~~~~ARlVIDA~G~~-Sp 95 (417)
..+.+.| .+|+.++.|+++.+++++ + -|.+. +| .+++||-||=|.|.. ||
T Consensus 229 ~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~ 290 (504)
T 1n4w_A 229 AAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGST 290 (504)
T ss_dssp HHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHH
T ss_pred HHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCH
Confidence 4555665 899999999999998632 2 24442 45 368999999888875 44
No 200
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=43.11 E-value=30 Score=32.01 Aligned_cols=52 Identities=8% Similarity=0.007 Sum_probs=34.5
Q ss_pred HHHHHHHhhcCcEEEcCceEEEEEEECC---eEEEEe-cCCc--EEEEEEEEeccCCC
Q 014843 42 EIVKKRFISLGGVIFEGYSVSSICTYEN---AAVLLL-AEGK--ILSSHLIIDAMGNF 93 (417)
Q Consensus 42 ~~L~~ka~~~Gg~i~~~t~v~~i~~~~d---~v~V~t-~~g~--~~~ARlVIDA~G~~ 93 (417)
..+.+++.+.|.+++.+++++++..+++ ++++.. .+|+ ++.+..||-|.|..
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 3456667788999999999999987654 233332 1443 56777777666644
No 201
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=42.30 E-value=44 Score=34.03 Aligned_cols=51 Identities=14% Similarity=0.184 Sum_probs=35.9
Q ss_pred HHHhhcC-cEEEcCceEEEEEEECCe--E-EEEec--CC-----cEEEEEEEEeccCCC-chh
Q 014843 46 KRFISLG-GVIFEGYSVSSICTYENA--A-VLLLA--EG-----KILSSHLIIDAMGNF-SPV 96 (417)
Q Consensus 46 ~ka~~~G-g~i~~~t~v~~i~~~~d~--v-~V~t~--~g-----~~~~ARlVIDA~G~~-Spi 96 (417)
..+.+.| .+|+.++.|+++.+++++ + -|++. +| .+++||-||=|.|.. ||-
T Consensus 234 ~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~ 296 (507)
T 1coy_A 234 AQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSK 296 (507)
T ss_dssp HHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHH
T ss_pred HHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHH
Confidence 4455554 899999999999998732 2 24432 45 368999999888875 543
No 202
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=42.18 E-value=32 Score=34.50 Aligned_cols=50 Identities=14% Similarity=0.134 Sum_probs=35.8
Q ss_pred HHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCc--EEEEEEEEeccCCCc
Q 014843 42 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK--ILSSHLIIDAMGNFS 94 (417)
Q Consensus 42 ~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~--~~~ARlVIDA~G~~S 94 (417)
..+.+.+.+.|.++..++ +.. ++++.+.|.+.+|+ +++++.||-|+|+.+
T Consensus 109 ~~~~~~~~~~gv~~~~g~-~~~--i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p 160 (479)
T 2hqm_A 109 GIYQKNLEKEKVDVVFGW-ARF--NKDGNVEVQKRDNTTEVYSANHILVATGGKA 160 (479)
T ss_dssp HHHHHHHHHTTEEEEEEE-EEE--CTTSCEEEEESSSCCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHhCCCEEEEeE-EEE--eeCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 334455667888888775 443 35566788776676 799999999999764
No 203
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=41.75 E-value=19 Score=36.65 Aligned_cols=51 Identities=10% Similarity=-0.317 Sum_probs=36.5
Q ss_pred CCCCC-EEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhCCCCChhhH
Q 014843 218 AAFNR-ILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSL 269 (417)
Q Consensus 218 ~~~dr-iLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~~~lsa~~L 269 (417)
...+| +.++||||--..|-.|.|+.+.++.+.-++..++..+ .|..+.+-|
T Consensus 390 ~~~gRr~~l~Gda~~~~~~p~g~G~n~g~~~a~~l~~~l~~~~-~g~~~~~~l 441 (497)
T 2bry_A 390 HGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWA-EGAGPLEVL 441 (497)
T ss_dssp TTEEEEEEECGGGTBCCCGGGCCHHHHHHHHHHHHHHHHHHHH-TTCCHHHHH
T ss_pred cCCcccceEeccccccCcCccccchhhHHHHHHHHHHHHHHHh-CCCCccchh
Confidence 34466 9999999931333399999899999888999888875 444444333
No 204
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=41.41 E-value=22 Score=32.68 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=33.9
Q ss_pred HHHHhhcCcEEEcCceEEEEEEECCeEEEEecC-----CcEEEEEEEEeccCCC
Q 014843 45 KKRFISLGGVIFEGYSVSSICTYENAAVLLLAE-----GKILSSHLIIDAMGNF 93 (417)
Q Consensus 45 ~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~-----g~~~~ARlVIDA~G~~ 93 (417)
.+++.+.|.+++.++++..+..+++...|...+ ++++.+.+||-|.|..
T Consensus 196 ~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 196 VENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp HHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred HHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 455677899999999999998766544444332 2457777777776643
No 205
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=40.08 E-value=24 Score=34.25 Aligned_cols=54 Identities=20% Similarity=0.260 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCchh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Spi 96 (417)
..+.+.+.+.+.+.|.+++.++++++++ .++ |++.+|+ +.+-.||-|.|..+..
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~~--v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN--EEG--VLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC--SSE--EEETTEE-EECSCEEEECCEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE--eeE--EEECCCE-EEcCEEEECcCCCcCH
Confidence 3456777888888999999999999987 344 4455676 9999999999977553
No 206
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=39.99 E-value=25 Score=34.87 Aligned_cols=51 Identities=12% Similarity=-0.003 Sum_probs=41.1
Q ss_pred HHHHHhhcCcEEEcCceEEEEEEECCeEEEEe-cCCcEEEEEEEEeccCCCc
Q 014843 44 VKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 44 L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t-~~g~~~~ARlVIDA~G~~S 94 (417)
..+.+.+.|.+++.+++|+++...++.+.|+. .++.+++++.||-|+|+..
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCB
T ss_pred CHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCccc
Confidence 44566678899999999999999888888862 2456899999999999964
No 207
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=39.78 E-value=35 Score=33.96 Aligned_cols=43 Identities=12% Similarity=-0.070 Sum_probs=34.7
Q ss_pred hcC-cEEEcCceEEEEEEECCe------EEEEec--CC---cEEEEEEEEeccCC
Q 014843 50 SLG-GVIFEGYSVSSICTYENA------AVLLLA--EG---KILSSHLIIDAMGN 92 (417)
Q Consensus 50 ~~G-g~i~~~t~v~~i~~~~d~------v~V~t~--~g---~~~~ARlVIDA~G~ 92 (417)
..| ++|+.+++|++|..++++ |.|++. +| ++++|+.||-|...
T Consensus 252 ~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~ 306 (504)
T 1sez_A 252 DLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPL 306 (504)
T ss_dssp TSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCH
T ss_pred hcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCH
Confidence 345 789999999999999988 777654 45 57899999988765
No 208
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=39.66 E-value=27 Score=35.21 Aligned_cols=53 Identities=15% Similarity=0.182 Sum_probs=37.2
Q ss_pred HHHHHHHHhhcCcEEEcCceEEEEEEE----CCeEEEEecCCc--EEEEEEEEeccCCCc
Q 014843 41 IEIVKKRFISLGGVIFEGYSVSSICTY----ENAAVLLLAEGK--ILSSHLIIDAMGNFS 94 (417)
Q Consensus 41 ~~~L~~ka~~~Gg~i~~~t~v~~i~~~----~d~v~V~t~~g~--~~~ARlVIDA~G~~S 94 (417)
...+.+.+.+.|.++..++ ++.+... ++.+.|.+.+|+ +++++.||-|+|..+
T Consensus 98 ~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 98 SADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp HHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred HHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 3345666777889998886 5444321 156777776676 799999999999864
No 209
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=37.62 E-value=57 Score=32.49 Aligned_cols=50 Identities=16% Similarity=0.092 Sum_probs=36.8
Q ss_pred HHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcE--EEEEEEEeccCCCc
Q 014843 42 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKI--LSSHLIIDAMGNFS 94 (417)
Q Consensus 42 ~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~--~~ARlVIDA~G~~S 94 (417)
..+.+.+.+.|.++..+ ++..+ +++.+.|.+.+|++ ++++.||-|+|+..
T Consensus 93 ~~~~~~~~~~~v~~~~g-~v~~i--d~~~~~V~~~~g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 93 QHKRNMSQYETLTFYKG-YVKIK--DPTHVIVKTDEGKEIEAETRYMIIASGAET 144 (466)
T ss_dssp HHHHHHTTCTTEEEESE-EEEEE--ETTEEEEEETTSCEEEEEEEEEEECCCEEE
T ss_pred chHHHHHHhCCCEEEEe-EEEEe--cCCeEEEEcCCCcEEEEecCEEEECCCCCc
Confidence 44444555678887766 45544 57788898877877 99999999999753
No 210
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=36.48 E-value=70 Score=32.03 Aligned_cols=61 Identities=16% Similarity=0.214 Sum_probs=45.2
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECC-eEEEEecC---Cc--EEEEEEEEeccCCCchh
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAE---GK--ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d-~v~V~t~~---g~--~~~ARlVIDA~G~~Spi 96 (417)
+|+ .+-+.+.+.+.+.|.+++.++++.+++..++ .+.|...+ |+ ++.+-.||-|.|..+..
T Consensus 223 ~d~-~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~ 289 (488)
T 3dgz_A 223 FDQ-QMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPET 289 (488)
T ss_dssp SCH-HHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESC
T ss_pred CCH-HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCccc
Confidence 443 4567777888889999999999999987544 45565433 44 47899999999987543
No 211
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=36.48 E-value=53 Score=32.71 Aligned_cols=45 Identities=13% Similarity=0.135 Sum_probs=31.7
Q ss_pred HHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch
Q 014843 45 KKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 45 ~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
.+.+.+.|.++..++.+. ++++.+.| . |++++++.||-|+|+.+.
T Consensus 100 ~~~~~~~gv~~~~g~~~~---~~~~~v~v--~-g~~~~~d~lViATGs~p~ 144 (464)
T 2eq6_A 100 GTLLKGNGVELLRGFARL---VGPKEVEV--G-GERYGAKSLILATGSEPL 144 (464)
T ss_dssp HHHHHHTTCEEEESCEEE---EETTEEEE--T-TEEEEEEEEEECCCEEEC
T ss_pred HHHHHhCCCEEEeeeEEE---ccCCEEEE--c-cEEEEeCEEEEcCCCCCC
Confidence 445566889998887543 34554444 3 668999999999998643
No 212
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=36.47 E-value=63 Score=29.48 Aligned_cols=50 Identities=12% Similarity=-0.049 Sum_probs=34.2
Q ss_pred HHHHHhh-cCcEEEcCceEEEEEEECCeE-EEEec---CCc--EEEEEEEEeccCCC
Q 014843 44 VKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGNF 93 (417)
Q Consensus 44 L~~ka~~-~Gg~i~~~t~v~~i~~~~d~v-~V~t~---~g~--~~~ARlVIDA~G~~ 93 (417)
+.+++.+ .|.+++.+++++++..+++++ .|... +|+ ++.+..||-|.|..
T Consensus 184 ~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 184 TLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp HHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 4555554 689999999999998876653 23332 454 57777777777654
No 213
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=36.46 E-value=44 Score=32.99 Aligned_cols=54 Identities=9% Similarity=0.012 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC--cEEEEEEEEeccCCC
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNF 93 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g--~~~~ARlVIDA~G~~ 93 (417)
+...+.+.+...+.|.+++.++.++++ +++.++++..+| +++.+.+||-|.|..
T Consensus 200 ~~~~~~l~~~l~~~GV~~~~~~~v~~v--~~~~~~~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 200 GASKRLVEDLFAERNIDWIANVAVKAI--EPDKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEE--CSSEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCceEEEE--eCCceEEEeeCCCceEeecceEEEeccCC
Confidence 344566777778899999999999986 567777776554 478888888887765
No 214
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=35.64 E-value=27 Score=34.58 Aligned_cols=57 Identities=18% Similarity=0.090 Sum_probs=36.7
Q ss_pred ChHHHHHHHHHHH-hhcCcEEEcCceEEEEEEECCeEEEEecCC-cEEEEEEEEeccCCCc
Q 014843 36 EPAKLIEIVKKRF-ISLGGVIFEGYSVSSICTYENAAVLLLAEG-KILSSHLIIDAMGNFS 94 (417)
Q Consensus 36 dr~~L~~~L~~ka-~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g-~~~~ARlVIDA~G~~S 94 (417)
+++.+..+..+++ .+.|.+++.+++|+++. .+.+.|.+.++ .+++++.||-|+|..+
T Consensus 56 ~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~--~~~~~v~~~~g~~~~~~d~lviAtG~~p 114 (449)
T 3kd9_A 56 TPDKLMYYPPEVFIKKRGIDLHLNAEVIEVD--TGYVRVRENGGEKSYEWDYLVFANGASP 114 (449)
T ss_dssp ----------CTHHHHTTCEEETTCEEEEEC--SSEEEEECSSSEEEEECSEEEECCCEEE
T ss_pred CHHHhhhcCHHHHHHhcCcEEEecCEEEEEe--cCCCEEEECCceEEEEcCEEEECCCCCC
Confidence 4445555555555 46889999999999874 45577777666 4899999999999753
No 215
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=35.34 E-value=37 Score=32.90 Aligned_cols=59 Identities=15% Similarity=0.125 Sum_probs=40.8
Q ss_pred ChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC--cEEEEEEEEeccCCCch
Q 014843 36 EPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFSP 95 (417)
Q Consensus 36 dr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g--~~~~ARlVIDA~G~~Sp 95 (417)
+.+.+...+.+.+.+.|.++..+ +|+++..+.+.+++...++ .+++++.||-|+|+.+.
T Consensus 54 ~~~~~~~~~~~~~~~~gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 54 DVDELKVDLSEALPEKGIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp CCCCEEEEHHHHTGGGTCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred CHHHHHHHHHHHHhhCCeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC
Confidence 44444455666667788998877 8998887766655543222 24999999999999644
No 216
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=35.22 E-value=13 Score=36.24 Aligned_cols=57 Identities=14% Similarity=0.028 Sum_probs=39.4
Q ss_pred cChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCc
Q 014843 35 REPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 35 Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
++.+.+.....+.+.+.|.++..+++|+.+..+. ..|+ .+|++++++.||-|+|+.+
T Consensus 57 ~~~~~~~~~~~~~~~~~~v~~~~g~~v~~id~~~--~~V~-~~g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 57 IPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGR--KVVI-TEKGEVPYDTLVLATGARA 113 (367)
T ss_dssp SCGGGGCSSCHHHHHHHTEEEECSCCEEEEETTT--TEEE-ESSCEEECSEEEECCCEEE
T ss_pred CCHHHhccCCHHHHHhCCcEEEECCEEEEEECCC--CEEE-ECCcEEECCEEEECCCCCC
Confidence 3444443333444556788999999998886554 3444 4677899999999999753
No 217
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=34.74 E-value=21 Score=35.13 Aligned_cols=46 Identities=15% Similarity=0.105 Sum_probs=36.3
Q ss_pred HHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCc
Q 014843 47 RFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 47 ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
.+.+.|.+++.+++|+.+..... .|++.+|++++++.||-|+|+.+
T Consensus 68 ~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 68 CKRAPEVEWLLGVTAQSFDPQAH--TVALSDGRTLPYGTLVLATGAAP 113 (408)
T ss_dssp CTTSCSCEEEETCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHCCCEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCC
Confidence 34567899999999999876543 55666777899999999999864
No 218
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=34.09 E-value=81 Score=32.12 Aligned_cols=52 Identities=12% Similarity=0.154 Sum_probs=37.0
Q ss_pred HHHHHhh-cCcEEEcCceEEEEEEECCeEE-EEecC---Cc--EE---EEEEEEeccCCC-ch
Q 014843 44 VKKRFIS-LGGVIFEGYSVSSICTYENAAV-LLLAE---GK--IL---SSHLIIDAMGNF-SP 95 (417)
Q Consensus 44 L~~ka~~-~Gg~i~~~t~v~~i~~~~d~v~-V~t~~---g~--~~---~ARlVIDA~G~~-Sp 95 (417)
+++++.+ .|.+|+.++.|+++..+++.++ |++.+ |+ ++ .+|-||-|.|.. ||
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp 263 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTS 263 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCH
Confidence 4455554 6889999999999999876443 44432 53 34 888999999984 44
No 219
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=33.50 E-value=29 Score=35.86 Aligned_cols=51 Identities=10% Similarity=0.182 Sum_probs=35.7
Q ss_pred HHHh-hcCcEEEcCceEEEEEEEC-CeEE-EEec-C--Cc--EEEEE-EEEeccCC-Cchh
Q 014843 46 KRFI-SLGGVIFEGYSVSSICTYE-NAAV-LLLA-E--GK--ILSSH-LIIDAMGN-FSPV 96 (417)
Q Consensus 46 ~ka~-~~Gg~i~~~t~v~~i~~~~-d~v~-V~t~-~--g~--~~~AR-lVIDA~G~-~Spi 96 (417)
+.+. ..|.+|+.++.|+++.+++ +.++ |... + |+ +++|+ -||-|.|. .||-
T Consensus 216 ~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~ 276 (546)
T 2jbv_A 216 HPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPK 276 (546)
T ss_dssp GGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHH
T ss_pred HHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCch
Confidence 3343 4789999999999999986 4332 4432 2 53 78997 88888887 4553
No 220
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=31.82 E-value=78 Score=29.18 Aligned_cols=45 Identities=11% Similarity=-0.019 Sum_probs=27.9
Q ss_pred CCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhCCCCChhh
Q 014843 220 FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYS 268 (417)
Q Consensus 220 ~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~~~lsa~~ 268 (417)
.++|.++||+++.. | .....+++.+..+|..|...|....+...+
T Consensus 276 ~~~vya~GD~~~~~-~---~~~~~A~~~g~~aa~~i~~~l~~~~~~~~~ 320 (325)
T 2q7v_A 276 IPMLFAAGDVSDYI-Y---RQLATSVGAGTRAAMMTERQLAALEVEGEE 320 (325)
T ss_dssp STTEEECSTTTCSS-C---CCHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CCCEEEeecccCcc-H---HHHHHHHHHHHHHHHHHHHHHHHhhcccee
Confidence 35688999998753 2 235677777777888888877766555443
No 221
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=31.74 E-value=53 Score=34.60 Aligned_cols=51 Identities=18% Similarity=0.270 Sum_probs=40.3
Q ss_pred HHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC--cEEEEEEEEeccCCCch
Q 014843 42 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFSP 95 (417)
Q Consensus 42 ~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g--~~~~ARlVIDA~G~~Sp 95 (417)
..+.+++.+.|.+++.+++++++. +++++++ .+| +++.+-.||-|.|..+.
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCcccc
Confidence 455667777899999999999876 6777775 456 57899999999998754
No 222
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=30.51 E-value=26 Score=34.20 Aligned_cols=48 Identities=17% Similarity=0.081 Sum_probs=37.3
Q ss_pred HHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCC
Q 014843 44 VKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 44 L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
..+.+.+.|.+++.+++++.+..... .|.+.+|+++.++.||-|+|..
T Consensus 71 ~~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 71 PAQFWEDKAVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp CHHHHHHTTEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCEE
T ss_pred CHHHHHHCCcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCCc
Confidence 34555678899999999999866544 5566678889999999999965
No 223
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=30.42 E-value=61 Score=32.44 Aligned_cols=48 Identities=17% Similarity=0.090 Sum_probs=35.0
Q ss_pred HHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCC--cEEEEEEEEeccCCCc
Q 014843 44 VKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFS 94 (417)
Q Consensus 44 L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g--~~~~ARlVIDA~G~~S 94 (417)
+...+.+.|.+++.++... ..++.+.|.+.+| .+++++.||-|+|+..
T Consensus 121 ~~~~~~~~~v~~~~g~~~~---~~~~~~~v~~~~g~~~~~~~d~lViATGs~p 170 (491)
T 3urh_A 121 VSFLFKKNKIDGFQGTGKV---LGQGKVSVTNEKGEEQVLEAKNVVIATGSDV 170 (491)
T ss_dssp HHHHHHHTTCEEEESEEEE---CSSSEEEEECTTSCEEEEECSEEEECCCEEC
T ss_pred HHHHHHhCCCEEEEEEEEE---ecCCEEEEEeCCCceEEEEeCEEEEccCCCC
Confidence 3444556788888776433 5667788887666 4799999999999774
No 224
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=29.97 E-value=65 Score=32.06 Aligned_cols=45 Identities=11% Similarity=0.110 Sum_probs=37.8
Q ss_pred cEEEcCceEEEEEEEC-CeEEEEec--CCc--EEEEEEEEeccCCCchhh
Q 014843 53 GVIFEGYSVSSICTYE-NAAVLLLA--EGK--ILSSHLIIDAMGNFSPVV 97 (417)
Q Consensus 53 g~i~~~t~v~~i~~~~-d~v~V~t~--~g~--~~~ARlVIDA~G~~Spia 97 (417)
.+++.++++++++..+ +++.|... +|+ ++.+-.||-|.|..+...
T Consensus 226 v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC
T ss_pred EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc
Confidence 8999999999999887 88888776 565 799999999999876543
No 225
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=29.82 E-value=34 Score=37.26 Aligned_cols=52 Identities=12% Similarity=-0.006 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEE--EEEEECCe-------EEEE-ecCCc--EEEEEEEEecc
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVS--SICTYENA-------AVLL-LAEGK--ILSSHLIIDAM 90 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~--~i~~~~d~-------v~V~-t~~g~--~~~ARlVIDA~ 90 (417)
+.|-+.+.+++.+ |+.|..+++|+ +|...+++ |.|+ +.+|+ +++|+.||-|.
T Consensus 347 ~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTv 410 (721)
T 3ayj_A 347 VEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAV 410 (721)
T ss_dssp HHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECS
T ss_pred HHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECC
Confidence 3455555555543 56788899999 99998776 8884 45566 79999999864
No 226
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=28.75 E-value=74 Score=26.66 Aligned_cols=50 Identities=16% Similarity=0.115 Sum_probs=34.0
Q ss_pred eecCCCCCCCCCCCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHHhC
Q 014843 206 GIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 261 (417)
Q Consensus 206 G~~P~~~~~p~~~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL~~ 261 (417)
|.+.+ +...++..++|.++||+++...| -.-.+++.+..+|..|...++.
T Consensus 123 g~i~v--d~~~~t~~~~i~a~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~~~~ 172 (180)
T 2ywl_A 123 AYIDT--DEGGRTSYPRVYAAGVARGKVPG----HAIISAGDGAYVAVHLVSDLRG 172 (180)
T ss_dssp TEECC--CTTCBCSSTTEEECGGGGTCCSC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEe--CCCCCcCCCCEEEeecccCcchh----hHHHHHHhHHHHHHHHHHHhhh
Confidence 55555 33445667899999999997665 2456667666677777666654
No 227
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=28.57 E-value=11 Score=37.30 Aligned_cols=49 Identities=14% Similarity=0.068 Sum_probs=36.3
Q ss_pred HHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCch
Q 014843 44 VKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 95 (417)
Q Consensus 44 L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~Sp 95 (417)
+.+.+.+.|.++.. ++++.+..+.+ .|.+.+++++.++.||-|+|..+.
T Consensus 62 ~~~~~~~~gv~~~~-~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 62 LAPLLPKFNIEFIN-EKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp STTTGGGGTEEEEC-SCEEEEETTTT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred HHHHHHhcCCEEEE-EEEEEEECCCC--EEEECCCcEEECCEEEEcCCcccc
Confidence 34455567888886 58888876554 566667778999999999998744
No 228
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=28.04 E-value=69 Score=31.37 Aligned_cols=52 Identities=8% Similarity=-0.040 Sum_probs=37.5
Q ss_pred HHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecC--CcEEEEEEEEeccCCC
Q 014843 40 LIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE--GKILSSHLIIDAMGNF 93 (417)
Q Consensus 40 L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~--g~~~~ARlVIDA~G~~ 93 (417)
..+.+.+.+.+.|.+++.++++++++ +++++++..+ ++++.+-+||-|.|..
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~--~~~v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEe--CCeEEEEecCCCceEEeeeEEEECCCCc
Confidence 56677788888999999999999874 4566655322 4567777777676654
No 229
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=27.86 E-value=38 Score=34.31 Aligned_cols=43 Identities=19% Similarity=0.269 Sum_probs=34.9
Q ss_pred hcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCc
Q 014843 50 SLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 50 ~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
+.|.+++.+++|+++...+. .|++.+|+++.++.||-|+|+.+
T Consensus 102 ~~gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs~p 144 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGGTP 144 (493)
T ss_dssp TCEEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCEEE
T ss_pred cCCeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCC
Confidence 56889999999999887654 45566788899999999999864
No 230
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=27.66 E-value=38 Score=34.28 Aligned_cols=58 Identities=12% Similarity=0.147 Sum_probs=43.8
Q ss_pred ChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEe-cCCc--EEEEEEEEeccCCCc
Q 014843 36 EPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNFS 94 (417)
Q Consensus 36 dr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t-~~g~--~~~ARlVIDA~G~~S 94 (417)
+...+...+.+++ ..|.+++.++++.++..+++.+.+.+ .+++ +++++.||-|+|+..
T Consensus 159 ~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 159 DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 3555556666666 67889999999999998888777654 3443 688999999999764
No 231
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=26.73 E-value=1.1e+02 Score=27.80 Aligned_cols=50 Identities=12% Similarity=0.084 Sum_probs=30.8
Q ss_pred HHHHHHHhh-cCcEEEcCceEEEEEEECCeE-EEEec---CCc--EEEEEEEEeccC
Q 014843 42 EIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMG 91 (417)
Q Consensus 42 ~~L~~ka~~-~Gg~i~~~t~v~~i~~~~d~v-~V~t~---~g~--~~~ARlVIDA~G 91 (417)
..+.+++.+ .|.+++.+++++++..+++.+ .|... +|+ ++.+..||-|.|
T Consensus 183 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 239 (310)
T 1fl2_A 183 QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG 239 (310)
T ss_dssp HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeC
Confidence 445566666 689999999999998665543 23322 232 455555555544
No 232
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=26.32 E-value=72 Score=33.51 Aligned_cols=62 Identities=11% Similarity=0.126 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhhcCcEEEcCceEEEEEEEC----C---eEEEEecCCc--EEEEE--EEEeccCCCchhhhhh
Q 014843 39 KLIEIVKKRFISLGGVIFEGYSVSSICTYE----N---AAVLLLAEGK--ILSSH--LIIDAMGNFSPVVKQI 100 (417)
Q Consensus 39 ~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~----d---~v~V~t~~g~--~~~AR--lVIDA~G~~Spiarql 100 (417)
.-..+|.......+..|+.++.|++|.+++ . ||++...+|+ +++|| +|+-|=+..||-.-++
T Consensus 228 aa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~l 300 (583)
T 3qvp_A 228 AAREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEY 300 (583)
T ss_dssp HHHHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHH
T ss_pred HHHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHH
Confidence 344555444445788999999999999983 3 3333323454 67886 5555555567766555
No 233
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=26.21 E-value=1.5e+02 Score=30.05 Aligned_cols=56 Identities=16% Similarity=-0.000 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCc--EEEEEEEEeccCCCchh
Q 014843 38 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK--ILSSHLIIDAMGNFSPV 96 (417)
Q Consensus 38 ~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~--~~~ARlVIDA~G~~Spi 96 (417)
+.+.......+...|.++..++ ...+.++.+.|.+.+|+ +++++.||-|+|..+.+
T Consensus 130 ~~l~~~~~~~~~~~gV~~i~g~---a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 130 GSLNWGYRVALREKKVVYENAY---GQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp HHHHHHHHHHHHHTTCEEECSE---EEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHhCCCEEEEEE---EEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCC
No 234
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=25.87 E-value=59 Score=32.32 Aligned_cols=44 Identities=11% Similarity=0.039 Sum_probs=34.5
Q ss_pred hcCcEEEcCceEEEEEEECCeEEEEe-cCCc--EEEEEEEEeccCCC
Q 014843 50 SLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNF 93 (417)
Q Consensus 50 ~~Gg~i~~~t~v~~i~~~~d~v~V~t-~~g~--~~~ARlVIDA~G~~ 93 (417)
..|.+++.+++|+++...++.+.+.. .+|. +++++.||-|+|..
T Consensus 78 ~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 124 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSK 124 (472)
T ss_dssp ---CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred hcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCC
Confidence 47889999999999998888888875 2354 78999999999975
No 235
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=24.78 E-value=68 Score=33.45 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=36.3
Q ss_pred HHHHHHHhhcCcEEEcCceEEEEEEECC-------eEEEEecCCc--EEEE-EEEEeccCC-Cchhh
Q 014843 42 EIVKKRFISLGGVIFEGYSVSSICTYEN-------AAVLLLAEGK--ILSS-HLIIDAMGN-FSPVV 97 (417)
Q Consensus 42 ~~L~~ka~~~Gg~i~~~t~v~~i~~~~d-------~v~V~t~~g~--~~~A-RlVIDA~G~-~Spia 97 (417)
.+|...+...|.+|+.++.|+++.++++ +|++...+|+ +++| |-||=|.|. .||-.
T Consensus 235 ~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~l 301 (587)
T 1gpe_A 235 AWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLI 301 (587)
T ss_dssp HHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHH
T ss_pred HHHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHH
Confidence 3443334457889999999999988752 2223323454 6788 778878777 45433
No 236
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=24.52 E-value=54 Score=32.06 Aligned_cols=44 Identities=20% Similarity=0.248 Sum_probs=35.4
Q ss_pred HhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCC
Q 014843 48 FISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 93 (417)
Q Consensus 48 a~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~ 93 (417)
+.+.|.+++.+++++.+..... .|.+.+|+++.++.||-|+|..
T Consensus 67 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 67 YGEARIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp HHHTTCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 3457899999999999876554 5566678889999999999976
No 237
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=24.05 E-value=61 Score=33.30 Aligned_cols=51 Identities=20% Similarity=0.120 Sum_probs=35.3
Q ss_pred HHHhhcCcEEEcCceEEEEEEECC---eEE-EEe--cCCc--EE---EEEEEEeccCCC-chh
Q 014843 46 KRFISLGGVIFEGYSVSSICTYEN---AAV-LLL--AEGK--IL---SSHLIIDAMGNF-SPV 96 (417)
Q Consensus 46 ~ka~~~Gg~i~~~t~v~~i~~~~d---~v~-V~t--~~g~--~~---~ARlVIDA~G~~-Spi 96 (417)
..+.+.|.+|+.++.|+++.++++ .++ |+. .+|+ ++ .+|-||-|.|.. ||-
T Consensus 202 ~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~ 264 (536)
T 1ju2_A 202 NKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQ 264 (536)
T ss_dssp GGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHH
T ss_pred hhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHH
Confidence 345668899999999999999864 222 443 2454 34 568888888875 443
No 238
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=23.84 E-value=86 Score=32.16 Aligned_cols=52 Identities=13% Similarity=-0.024 Sum_probs=40.7
Q ss_pred HHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEe-cCCc--EEEEEEEEeccCCC
Q 014843 42 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNF 93 (417)
Q Consensus 42 ~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t-~~g~--~~~ARlVIDA~G~~ 93 (417)
..+.+.+...|.++..+++|+++...++.+.+.+ .+|. +++++.||-|+|+.
T Consensus 97 ~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (588)
T 3ics_A 97 QTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAK 151 (588)
T ss_dssp SCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred cCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCC
Confidence 3344445567889999999999999888888875 3455 78899999999975
No 239
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=23.30 E-value=1.9e+02 Score=28.65 Aligned_cols=44 Identities=11% Similarity=0.149 Sum_probs=32.2
Q ss_pred HhhcCcEEEcCceEEEEEEECCeEEEEecCCc-EEEEEEEEeccCCCc
Q 014843 48 FISLGGVIFEGYSVSSICTYENAAVLLLAEGK-ILSSHLIIDAMGNFS 94 (417)
Q Consensus 48 a~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~-~~~ARlVIDA~G~~S 94 (417)
+...|.++..++.. ...++.+.|.+.+|. +++++.||-|+|+.+
T Consensus 118 ~~~~~v~~~~g~a~---~~~~~~v~v~~~~g~~~~~~d~lviATGs~p 162 (483)
T 3dgh_A 118 LRDKKVEYINGLGS---FVDSHTLLAKLKSGERTITAQTFVIAVGGRP 162 (483)
T ss_dssp HHHTTCEEECSEEE---EEETTEEEEECTTCCEEEEEEEEEECCCEEE
T ss_pred HHhCCCEEEEeEEE---EccCCEEEEEeCCCeEEEEcCEEEEeCCCCc
Confidence 44577777766432 456778888877664 799999999999753
No 240
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=23.07 E-value=1.1e+02 Score=28.11 Aligned_cols=51 Identities=16% Similarity=0.007 Sum_probs=33.8
Q ss_pred HHHHHH-hhcCcEEEcCceEEEEEEECC--e---EEEEec-CC--cEEEEEEEEeccCCC
Q 014843 43 IVKKRF-ISLGGVIFEGYSVSSICTYEN--A---AVLLLA-EG--KILSSHLIIDAMGNF 93 (417)
Q Consensus 43 ~L~~ka-~~~Gg~i~~~t~v~~i~~~~d--~---v~V~t~-~g--~~~~ARlVIDA~G~~ 93 (417)
.+.+++ .+.|.+++.+++++++..+++ . +++... +| +++.+-.||-|.|..
T Consensus 199 ~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 199 IMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 444454 458899999999999987664 3 333321 34 467777777777754
No 241
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=22.48 E-value=36 Score=34.57 Aligned_cols=47 Identities=11% Similarity=-0.063 Sum_probs=37.5
Q ss_pred HHhhcCcEEEcCceEEEEEEECCeEEEEec-CCc--EEEEEEEEeccCCC
Q 014843 47 RFISLGGVIFEGYSVSSICTYENAAVLLLA-EGK--ILSSHLIIDAMGNF 93 (417)
Q Consensus 47 ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~-~g~--~~~ARlVIDA~G~~ 93 (417)
.+...|.+++.+++|+++...++.+.+... +|. ++.++.||-|+|+.
T Consensus 67 ~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 67 FKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp HHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCC
Confidence 334478899999999999988888887752 343 78999999999985
No 242
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=21.46 E-value=65 Score=28.75 Aligned_cols=36 Identities=8% Similarity=0.217 Sum_probs=28.6
Q ss_pred CCCCCEEEEcCCCCCCCCccccchhHHHhhHHHHHHHHHHHH
Q 014843 218 AAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAV 259 (417)
Q Consensus 218 ~~~driLlvGDAAglvdPlSg~GfGs~lR~l~rla~gI~~AL 259 (417)
+..++|.++||+| ... -++.|+.+...+|+.|...|
T Consensus 196 t~~p~iya~G~~a--~~g----~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 196 KRLEGLYAVGLCV--REG----DYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TTSBSEEECGGGT--SCC----CHHHHHHHHHHHHHHHHHHC
T ss_pred cccccceeeeecc--cCc----cHHHHHHHHHHHHHHHHhhc
Confidence 3678899999999 333 67788998888998887765
No 243
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=21.40 E-value=1.7e+02 Score=26.69 Aligned_cols=59 Identities=19% Similarity=0.021 Sum_probs=42.5
Q ss_pred ccChHHHHHHHHHHHhhcCcEEEcCceEEEEEEECCeEEEEecCCcEEEEEEEEeccCCCc
Q 014843 34 FREPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 94 (417)
Q Consensus 34 ~Vdr~~L~~~L~~ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g~~~~ARlVIDA~G~~S 94 (417)
+++...+.....+...+.+..+.....+...... +...+. .++++++++-||-|+|+.+
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 58 MITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKG-EYKVIN-FGNKELTAKAVIIATGAEY 116 (312)
T ss_dssp SBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECS-SCEEEE-CSSCEEEEEEEEECCCEEE
T ss_pred ccchHHHHHHHHHHHhhccccccceeeeeeeeee-cceeec-cCCeEEEeceeEEcccCcc
Confidence 4677788888888888887777777666555443 333343 3677999999999999753
No 244
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=20.72 E-value=1.5e+02 Score=29.59 Aligned_cols=45 Identities=18% Similarity=0.079 Sum_probs=31.4
Q ss_pred HHhhcCcEEEcCceEEEEEEECCeEEEEecCC--cEEEEEEEEeccCCCc
Q 014843 47 RFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFS 94 (417)
Q Consensus 47 ka~~~Gg~i~~~t~v~~i~~~~d~v~V~t~~g--~~~~ARlVIDA~G~~S 94 (417)
.+...|.++..++. ...+++.+.|.+.+| .+++++.||-|+|+.+
T Consensus 113 ~~~~~~V~~i~g~~---~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p 159 (488)
T 3dgz_A 113 QLQDRKVKYFNIKA---SFVDEHTVRGVDKGGKATLLSAEHIVIATGGRP 159 (488)
T ss_dssp HHHHTTCEEECCEE---EESSSSEEEEECTTSCEEEEEEEEEEECCCEEE
T ss_pred HHHhCCCEEEEEEE---EEccCCeEEEEeCCCceEEEECCEEEEcCCCCC
Confidence 44557777766542 224566778887666 4799999999999753
Done!