BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014844
(417 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LU68|CIA2_ARATH Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana
GN=CIA2 PE=2 SV=1
Length = 435
Score = 228 bits (582), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 186/459 (40%), Positives = 244/459 (53%), Gaps = 83/459 (18%)
Query: 1 MSSYLS---GGGRTYALDLEIIKSPSHSTGTSHTSSSPLSTLSEASNS-PLAISTRKART 56
MS+ LS GG Y+ +LE +KSP S+ T+ T ++ S+ S++ PLAISTRK RT
Sbjct: 1 MSACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESSNSPLAISTRKPRT 60
Query: 57 PRKRPNQTYNEAAALLSTACPNIFSTKHLTNLNKFTTKPPDHRRHHQQQEPNQQFF---- 112
RKRPNQTYNEAA LLSTA PNIFS+ NL+ + N F+
Sbjct: 61 QRKRPNQTYNEAATLLSTAYPNIFSS----NLSS---------KQKTHSSSNSHFYGPLL 107
Query: 113 ---DESSELLLPFRVIDDSGFLLHQPILDKPRFPLEPKVTKFCENKLSCQNSGEVDFQGA 169
D++S+LLLP+ I++ FL H I K F F + K NSG + G
Sbjct: 108 SDNDDASDLLLPYESIEEPDFLFHPTIQTKTEF--------FSDQKEV--NSGGDCYGG- 156
Query: 170 NHNPMEVQISSEFDEDFDAESIILDEEFEEGIDSIMGNL----------SVKKDAIESDD 219
E++ +F ++FDAESI LDE+ EEGIDSIMG + + + +
Sbjct: 157 -----EIE-KFDFSDEFDAESI-LDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRG 209
Query: 220 GHS---------QVHNSNCWYGNPMGIGFGGKLELGFGMRSGMKALRQVDEGNWWNF-PI 269
G S Q+ N W + G F LG G+RS ALR+ D+ W +
Sbjct: 210 GRSSSNRIGKLEQMMMINSWNRSSNGFNF----PLGLGLRS---ALRENDDTKLWKIHTV 262
Query: 270 DVLQISPKFNN--SSGTGNSNRKGSSEKRKKKVGKEK----------PVAESKVSELPAK 317
D QISP+ + ++ + S+ +K + EK V + ++E +
Sbjct: 263 DFEQISPRIQTVKTETAISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSL 322
Query: 318 EESPIPKANSGELLLKLQYDDVLNAWSGKGSPFLDESLAPDGQGNDVSARLAQIDLFSDG 377
E++ LLKL YD VL AWS K SPF DE + DV+ARLAQIDLF D
Sbjct: 323 EDTEETSLKRTGPLLKLDYDGVLEAWSDKTSPFPDE--IQGSEAVDVNARLAQIDLFGDS 380
Query: 378 GLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
G+REASVLRYKEKRRTRLFSKKIRYQVRK+NAD+RPRMK
Sbjct: 381 GMREASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMK 419
>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana
GN=COL16 PE=2 SV=2
Length = 417
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 63/108 (58%), Gaps = 24/108 (22%)
Query: 330 LLLKLQYDDVLNAWSGKGSPFLDESLAPDGQGNDVSARLAQIDL---------------- 373
L+L+L YD V++ W G+G P+ S P + D+S A +
Sbjct: 293 LMLRLNYDSVISTWGGQGPPW--SSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGC 350
Query: 374 -----FSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
F DGG REA V RY+EKRRTRLFSKKIRY+VRK+NA++RPRMK
Sbjct: 351 LPSSGFGDGG-REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 397
>sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana GN=COL6
PE=2 SV=2
Length = 406
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 60/105 (57%), Gaps = 18/105 (17%)
Query: 330 LLLKLQYDDVLNAWSGKGSPF---------LDESLAPDGQGNDVSARLAQIDLFSDGGL- 379
L+L+L Y+ V++ W G+G P+ LD P + A + F GL
Sbjct: 289 LMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEAHHHNHFRGLGLH 348
Query: 380 --------REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
REA V RY+EKRRTRLFSKKIRY+VRK+NA++RPRMK
Sbjct: 349 LGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 393
>sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7
PE=2 SV=1
Length = 392
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 62/106 (58%), Gaps = 20/106 (18%)
Query: 330 LLLKLQYDDVLNAWSGKGSPFLDESLAPDGQ--GNDVSARLA---QIDLFSDG------- 377
L L+L Y V++AW GSP+ + P+ GN + + + SDG
Sbjct: 277 LFLRLDYGAVISAWDNHGSPW-KTGIKPECMLGGNTCLPHVVGGYEKLMSSDGSVTRQQG 335
Query: 378 -------GLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
G REA VLRYKEKRRTRLFSKKIRY+VRK+NA++RPR+K
Sbjct: 336 RDGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIK 381
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana GN=COL8
PE=2 SV=2
Length = 319
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Query: 333 KLQYDDVLNAWSGKGSPFLDESLAPDGQGNDVSARLAQ--IDLFSDGGLREASVLRYKEK 390
+L Y++V+ AW + SP D + N S +L I+ REA V RY++K
Sbjct: 229 RLNYENVIAAWDKQESP-------RDVKNNTSSFQLVPPGIEEKRVRSEREARVWRYRDK 281
Query: 391 RRTRLFSKKIRYQVRKVNADRRPRMK 416
R+ RLF KKIRY+VRKVNAD+RPRMK
Sbjct: 282 RKNRLFEKKIRYEVRKVNADKRPRMK 307
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2
SV=1
Length = 395
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 36/62 (58%)
Query: 355 LAPDGQGNDVSARLAQIDLFSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPR 414
L P G N S Q+ L REA VLRY+EK++ R F K IRY+ RK A+ RPR
Sbjct: 301 LTPAGAINLFSGPSLQMSLHFSSMDREARVLRYREKKKARKFEKTIRYETRKAYAEARPR 360
Query: 415 MK 416
+K
Sbjct: 361 IK 362
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 351 LDESLAPDGQGNDVSARLAQIDLFSDGGL-------REASVLRYKEKRRTRLFSKKIRYQ 403
++ + PDG N+ S + I + GG REA VLRY+EKR+ R F K IRY
Sbjct: 250 IEYGVVPDGNTNN-SVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYA 308
Query: 404 VRKVNADRRPRMK 416
RK A+ RPR+K
Sbjct: 309 SRKAYAESRPRIK 321
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2
PE=1 SV=1
Length = 347
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
REA VLRY+EK++TR F K IRY RK A+ RPR+K
Sbjct: 278 REARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIK 314
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3
PE=1 SV=1
Length = 294
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
REA VLRY+EKR+ R F K IRY RK A+ RPR+K
Sbjct: 229 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIK 265
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRM 415
REA VLRY+EKR+TR F K IRY RK A+ RPR+
Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRV 341
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4
PE=2 SV=2
Length = 362
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
REA V+RY+EKR+ R F K IRY RK A+ RPR+K
Sbjct: 295 REARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIK 331
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1
PE=1 SV=1
Length = 355
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
REA VLRY+EK++ R F K IRY RK A++RPR+K
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIK 322
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 372 DLFSDG-GLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
DL+ +G REA++ ++++KR+ R F KK+RYQ RK A++RPR++
Sbjct: 703 DLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIR 748
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 372 DLFSDG-GLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
DL+ +G REA++ ++++KR+ R F KK+RYQ RK A++RPR++
Sbjct: 703 DLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIR 748
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
REA++++++ KR+ R F KK+RYQ RK A++RPR+K
Sbjct: 417 REAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVK 453
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 30/37 (81%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
REA++ ++++KR+ R F KK+RYQ RK A++RPR++
Sbjct: 669 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVR 705
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
REA++ +++ KR+ R F KK+RYQ RK+ A++RPR+K
Sbjct: 574 REAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVK 610
>sp|Q9SSE5|COL9_ARATH Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9
PE=2 SV=1
Length = 372
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
R +V+RYKEK++ R F K++RY RK AD R R+K
Sbjct: 315 RNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVK 351
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 374 FSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
F+ R A+V+++++KR+ R F KK+RYQ RK A++RPR++
Sbjct: 676 FTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVR 718
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 374 FSDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
F+ R A+V+++++KR+ R F KK+RYQ RK A++RPR++
Sbjct: 676 FTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVR 718
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 18/82 (21%)
Query: 335 QYDDVLNAWSGKGSPFLDESLAPDGQGNDVSARLAQIDLFSDGGLREASVLRYKEKRRTR 394
Q V ++WS G+P +E R+ ++D RE ++L+++ KR R
Sbjct: 506 QMSMVHHSWSPAGNPPSNE------------VRVNKLDR------REEALLKFRRKRNQR 547
Query: 395 LFSKKIRYQVRKVNADRRPRMK 416
F KKIRY RK A+RRPR+K
Sbjct: 548 CFDKKIRYVNRKRLAERRPRVK 569
>sp|Q9LUA9|COL10_ARATH Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana
GN=COL10 PE=1 SV=1
Length = 373
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 375 SDGGLREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
S R +V+RYKEK++ R F K++RY RK AD R R+K
Sbjct: 311 SHATTRNNAVMRYKEKKKARKFDKRVRYVSRKERADVRRRVK 352
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 229 CWYGNPMGIGFGGKLELGFGMRSGMKALRQVDE-GNW---WNFPIDVLQIS--PKFNNSS 282
C + N + K ++G G ++GM ++ +E G+ + + L+ + N SS
Sbjct: 279 CAHVNRLKEAEDQKEQIGTGSQTGMSMSKKAEEPGDLEKNAKYSVQALERNNDDTLNRSS 338
Query: 283 GTGNSNRKGSSEKRK---------KKVGKEKPVAESKVSELPAKEESPIPKANSGELLLK 333
G K S R+ KK +++ S L S K N+G K
Sbjct: 339 GNSQVESKAPSSNREDLQSLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSKYNNGATSAK 398
Query: 334 LQYDDVLNAWSGKGSP---FLDESLAPDG---QGNDVSARLAQIDLFSDGGLREASVLRY 387
++ + + S SP L S + D Q + S R AQ REA+++++
Sbjct: 399 KAPEENVESCSPHDSPIAKLLGSSSSSDNPLKQQSSGSDRWAQ---------REAALMKF 449
Query: 388 KEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
+ KR+ R F KK+RY RK A++RP +K
Sbjct: 450 RLKRKERCFEKKVRYHSRKKLAEQRPHVK 478
>sp|O22800|COL14_ARATH Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana
GN=COL14 PE=2 SV=2
Length = 402
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
R+ ++ RYKEK++TR + K IRY+ RK A+ R R+K
Sbjct: 357 RDNAMQRYKEKKKTRRYDKTIRYETRKARAETRLRVK 393
>sp|Q9LJ44|COL12_ARATH Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana
GN=COL12 PE=2 SV=2
Length = 364
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
R + LRYKEK+ R F K+IRY RK AD R R+K
Sbjct: 307 RNEAKLRYKEKKLKRSFGKQIRYASRKARADTRKRVK 343
>sp|Q9C7E8|COL15_ARATH Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana
GN=COL15 PE=2 SV=1
Length = 433
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
R ++ RYKEKR+TR + K IRY+ RK AD R R++
Sbjct: 385 RGDAMQRYKEKRKTRRYDKTIRYESRKARADTRLRVR 421
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
REA++ +++ KR+ R + KK+RY+ RK A++RPR+K
Sbjct: 509 REAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIK 545
>sp|O82256|COL13_ARATH Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana
GN=COL13 PE=2 SV=1
Length = 332
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
R +++ RYKEK+++R + K IRY+ RKV A+ R R++
Sbjct: 287 RNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIR 323
>sp|Q8H1G0|GAT28_ARATH GATA transcription factor 28 OS=Arabidopsis thaliana GN=GATA28 PE=2
SV=1
Length = 302
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
R AS++R++EKR+ R F KKIRY VRK A R R K
Sbjct: 147 RLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNK 183
>sp|Q8GXL7|GAT24_ARATH GATA transcription factor 24 OS=Arabidopsis thaliana GN=GATA24 PE=2
SV=2
Length = 297
Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
R AS+LR++EKR+ R F K IRY VRK A R R K
Sbjct: 143 RLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKK 179
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
R A++ +++ KR+ R F KK+RY RK A+ RPR++
Sbjct: 443 RAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVR 479
>sp|Q9LRH6|GAT25_ARATH GATA transcription factor 25 OS=Arabidopsis thaliana GN=GATA25 PE=2
SV=2
Length = 309
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 380 REASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
R S+ R+++KR R F KK+RY VR+ A R R K
Sbjct: 146 RAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNK 182
>sp|O23379|COL11_ARATH Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis
thaliana GN=COL11 PE=3 SV=2
Length = 330
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 379 LREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMK 416
LR+ + RYK+K+ R+F K+IRY RK AD R R+K
Sbjct: 275 LRDEAKKRYKQKKSKRMFGKQIRYASRKARADTRKRVK 312
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,321,988
Number of Sequences: 539616
Number of extensions: 7467507
Number of successful extensions: 19678
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 19589
Number of HSP's gapped (non-prelim): 118
length of query: 417
length of database: 191,569,459
effective HSP length: 120
effective length of query: 297
effective length of database: 126,815,539
effective search space: 37664215083
effective search space used: 37664215083
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)