Query 014844
Match_columns 417
No_of_seqs 156 out of 330
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 18:50:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014844.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014844hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vyua1 b.34.2.1 (A:39-174) SH 17.0 17 0.0012 29.4 0.6 24 245-268 45-69 (136)
2 d1nq4a_ a.28.1.1 (A:) Oxytetra 16.9 20 0.0015 26.5 1.0 24 184-207 21-45 (95)
3 d2af8a_ a.28.1.1 (A:) Actinorh 16.8 21 0.0015 25.8 1.1 10 198-207 37-46 (86)
4 d1t0ha_ b.34.2.1 (A:) SH3-like 16.3 20 0.0014 27.6 0.9 22 245-267 43-66 (96)
5 d1tbaa_ a.15.1.1 (A:) TAF(II)2 16.3 21 0.0015 26.5 1.0 26 171-199 19-44 (67)
6 d2pi2e1 b.40.4.3 (E:3-117) Rep 14.4 31 0.0023 26.8 1.6 19 63-82 95-113 (115)
7 d1opka1 b.34.2.1 (A:83-139) Ab 12.8 30 0.0022 23.4 1.0 21 247-267 17-39 (57)
8 d1imua_ d.204.1.1 (A:) Ribosom 11.8 48 0.0035 24.5 2.0 23 381-403 82-104 (107)
9 d1ue9a_ b.34.2.1 (A:) Intersec 10.6 63 0.0046 22.7 2.2 19 247-266 24-44 (80)
10 d3eeqa1 c.151.1.1 (A:215-335) 9.2 39 0.0029 26.3 0.5 12 242-253 1-12 (121)
No 1
>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=16.99 E-value=17 Score=29.39 Aligned_cols=24 Identities=13% Similarity=0.364 Sum_probs=14.6
Q ss_pred ecccccccc-ccccccCCCCccccc
Q 014844 245 LGFGMRSGM-KALRQVDEGNWWNFP 268 (417)
Q Consensus 245 lGlG~r~~~-~ALR~~dd~~wW~~p 268 (417)
.||.|+.|- =.+..-+|.+||.-=
T Consensus 45 ~~LsF~~gdil~v~~~~d~~WW~~r 69 (136)
T d1vyua1 45 SGVNFEAKDFLHIKEKYSNDWWIGR 69 (136)
T ss_dssp CBCEECTTCEEEEEEECSSSEEEEE
T ss_pred cccCCCCCCEEEEEeccCCCcEEEE
Confidence 457787773 122344577899863
No 2
>d1nq4a_ a.28.1.1 (A:) Oxytetracycline polyketide synthase acyl carrier {Streptomyces rimosus [TaxId: 1927]}
Probab=16.91 E-value=20 Score=26.48 Aligned_cols=24 Identities=25% Similarity=0.109 Sum_probs=13.8
Q ss_pred ccCCccccccchH-HHhhhhhhccc
Q 014844 184 EDFDAESIILDEE-FEEGIDSIMGN 207 (417)
Q Consensus 184 e~FDaeSi~LdEe-~eeGIDsIMG~ 207 (417)
.+-|.+.|-+|.. .+-|+||||.-
T Consensus 21 ~~~~~~~i~~d~~f~dlG~DSl~~~ 45 (95)
T d1nq4a_ 21 ESIDLGGDVEDVAFDALGYDSLALL 45 (95)
T ss_dssp STTCSCSCCSSSCHHHHTCCSHHHH
T ss_pred hCCChhhcccCCCHHHcCCcHHHHH
Confidence 3444555444433 35599998865
No 3
>d2af8a_ a.28.1.1 (A:) Actinorhodin polyketide synthase acyl carrier protein, ACT ACP {Streptomyces coelicolor, A3(2) [TaxId: 1902]}
Probab=16.84 E-value=21 Score=25.83 Aligned_cols=10 Identities=30% Similarity=0.278 Sum_probs=7.8
Q ss_pred Hhhhhhhccc
Q 014844 198 EEGIDSIMGN 207 (417)
Q Consensus 198 eeGIDsIMG~ 207 (417)
+-|+||||.-
T Consensus 37 dlG~DSl~~~ 46 (86)
T d2af8a_ 37 DIGYDSLALM 46 (86)
T ss_dssp HHTCSSHHHH
T ss_pred HcCCCHHHHH
Confidence 4599999875
No 4
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=16.31 E-value=20 Score=27.60 Aligned_cols=22 Identities=9% Similarity=0.516 Sum_probs=14.2
Q ss_pred eccccccc--cccccccCCCCcccc
Q 014844 245 LGFGMRSG--MKALRQVDEGNWWNF 267 (417)
Q Consensus 245 lGlG~r~~--~~ALR~~dd~~wW~~ 267 (417)
.||.|+.| +.-|.++ |.+||.-
T Consensus 43 ~~LsF~~GDii~v~~~~-d~~WW~g 66 (96)
T d1t0ha_ 43 MAISFEAKDFLHVKEKF-NNDWWIG 66 (96)
T ss_dssp CBCCBCTTCEEEEEEEC-SSSEEEE
T ss_pred ccccCCCCCEEEEeeee-CCCceEE
Confidence 46888887 3445555 4569964
No 5
>d1tbaa_ a.15.1.1 (A:) TAF(II)230 TBP-binding fragment {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=16.28 E-value=21 Score=26.47 Aligned_cols=26 Identities=15% Similarity=0.142 Sum_probs=14.8
Q ss_pred CCCccccccCCCCccCCccccccchHHHh
Q 014844 171 HNPMEVQISSEFDEDFDAESIILDEEFEE 199 (417)
Q Consensus 171 d~~~E~~l~~d~de~FDaeSi~LdEe~ee 199 (417)
|+-|. |..|||+.=--+|+ ||+|..+
T Consensus 19 d~~G~--Le~Dd~~~g~~~s~-lD~E~k~ 44 (67)
T d1tbaa_ 19 DSEGR--LLQDDDGEGRGGTG-FDAELRE 44 (67)
T ss_dssp ETTTE--ECCSSCCCSSSCSS-CCTTTHH
T ss_pred CCCCc--cccccccccccccc-cCHHHHH
Confidence 45556 55555554445566 6666655
No 6
>d2pi2e1 b.40.4.3 (E:3-117) Replication protein A 14 KDa (RPA14) subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.41 E-value=31 Score=26.81 Aligned_cols=19 Identities=26% Similarity=0.576 Sum_probs=16.7
Q ss_pred hhHHHHHHHHHhhCCCcccc
Q 014844 63 QTYNEAAALLSTACPNIFST 82 (417)
Q Consensus 63 QTYNEAAaLLstayPniFs~ 82 (417)
.+|||+..|+. .||++|+-
T Consensus 95 ~~yn~lv~l~~-~~~~~f~~ 113 (115)
T d2pi2e1 95 GLYNEAVKIIH-DFPQFYPL 113 (115)
T ss_dssp HHHHHHHHHHH-HCGGGSCS
T ss_pred HHHHHHHHHHH-hChhhccc
Confidence 58999999998 69999974
No 7
>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=12.80 E-value=30 Score=23.45 Aligned_cols=21 Identities=19% Similarity=0.583 Sum_probs=13.3
Q ss_pred cccccc--cccccccCCCCcccc
Q 014844 247 FGMRSG--MKALRQVDEGNWWNF 267 (417)
Q Consensus 247 lG~r~~--~~ALR~~dd~~wW~~ 267 (417)
|.|+.| +.-|.+++++.||..
T Consensus 17 Ls~~~Gd~i~vl~~~~~~~W~~~ 39 (57)
T d1opka1 17 LSITKGEKLRVLGYNHNGEWCEA 39 (57)
T ss_dssp CCBCTTCEEEEEEECTTSSEEEE
T ss_pred cCCCCCCEEEEeEecCCCCEEEE
Confidence 556655 356666667778853
No 8
>d1imua_ d.204.1.1 (A:) Ribosome binding protein Y (YfiA homologue) {Haemophilus influenzae [TaxId: 727]}
Probab=11.84 E-value=48 Score=24.53 Aligned_cols=23 Identities=13% Similarity=0.277 Sum_probs=17.8
Q ss_pred HHHHHHHHHHhhccCCCCccccc
Q 014844 381 EASVLRYKEKRRTRLFSKKIRYQ 403 (417)
Q Consensus 381 ea~v~RYkEKRk~R~F~KkIRY~ 403 (417)
+..|.|||+|.+.+.-...+++.
T Consensus 82 ~rqLrk~k~K~~~~~~~~~~k~~ 104 (107)
T d1imua_ 82 ERQLNKLQHKSESRRADERLKDS 104 (107)
T ss_dssp HHHHHHHHHCCSCCSSCCCSCCS
T ss_pred HHHHHHHHHHHHHhcccchhhhh
Confidence 34689999999888777777764
No 9
>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.62 E-value=63 Score=22.67 Aligned_cols=19 Identities=21% Similarity=0.824 Sum_probs=11.5
Q ss_pred cccccc--cccccccCCCCccc
Q 014844 247 FGMRSG--MKALRQVDEGNWWN 266 (417)
Q Consensus 247 lG~r~~--~~ALR~~dd~~wW~ 266 (417)
|.|+.| +.-|+.+ |..||.
T Consensus 24 Ls~~~Gd~i~Vl~~~-~~~Ww~ 44 (80)
T d1ue9a_ 24 LSLAPGQLILILKKN-TSGWWQ 44 (80)
T ss_dssp CCCCTTCEEEEEEEC-SSSEEE
T ss_pred eeEcCCCEEEEEEEe-CCCeEE
Confidence 566655 3556655 457995
No 10
>d3eeqa1 c.151.1.1 (A:215-335) Cobalamin biosynthesis protein G, CbiG {Sulfolobus solfataricus [TaxId: 2287]}
Probab=9.18 E-value=39 Score=26.33 Aligned_cols=12 Identities=25% Similarity=0.731 Sum_probs=9.7
Q ss_pred ceeecccccccc
Q 014844 242 KLELGFGMRSGM 253 (417)
Q Consensus 242 k~~lGlG~r~~~ 253 (417)
|+.+|+|+|++.
T Consensus 1 ri~vGiGcrrg~ 12 (121)
T d3eeqa1 1 KISIGIGSKKDV 12 (121)
T ss_dssp EEEEEEEECSSC
T ss_pred CEEEEeccCCCC
Confidence 356899999994
Done!