Query 014848
Match_columns 417
No_of_seqs 164 out of 1075
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 18:54:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014848.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014848hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1khd_A Anthranilate phosphorib 100.0 2.3E-55 7.8E-60 439.7 19.7 196 210-417 8-204 (345)
2 1vqu_A Anthranilate phosphorib 100.0 5.3E-55 1.8E-59 441.2 21.6 197 209-417 21-227 (374)
3 2elc_A Trp D, anthranilate pho 100.0 1.1E-54 3.9E-59 432.1 20.5 189 217-417 2-190 (329)
4 1o17_A Anthranilate PRT, anthr 100.0 1.1E-54 3.6E-59 434.9 20.1 190 213-417 1-190 (345)
5 4hkm_A Anthranilate phosphorib 100.0 1.2E-54 4E-59 434.1 20.1 195 211-417 2-197 (346)
6 3r88_A Anthranilate phosphorib 100.0 3.2E-54 1.1E-58 435.9 20.6 193 213-417 24-218 (377)
7 2dsj_A Pyrimidine-nucleoside ( 100.0 4.1E-47 1.4E-51 388.8 20.0 190 213-417 1-197 (423)
8 1brw_A PYNP, protein (pyrimidi 100.0 5.1E-46 1.7E-50 381.9 19.0 186 213-417 1-198 (433)
9 2tpt_A Thymidine phosphorylase 100.0 1.2E-45 4.1E-50 379.8 19.7 185 213-416 2-200 (440)
10 3h5q_A PYNP, pyrimidine-nucleo 100.0 4E-45 1.4E-49 375.4 18.1 187 212-417 3-201 (436)
11 1uou_A Thymidine phosphorylase 100.0 4.8E-45 1.7E-49 378.0 18.2 185 214-417 29-226 (474)
12 1qdl_B Protein (anthranilate s 98.5 3.8E-08 1.3E-12 89.3 1.9 112 98-211 47-180 (195)
13 3r75_A Anthranilate/para-amino 98.3 9E-08 3.1E-12 102.8 0.5 108 98-212 488-619 (645)
14 1i1q_B Anthranilate synthase c 98.3 2.1E-07 7.1E-12 84.1 2.4 107 100-211 51-174 (192)
15 1a9x_B Carbamoyl phosphate syn 98.1 3.9E-07 1.3E-11 92.4 0.8 106 98-211 233-357 (379)
16 1wl8_A GMP synthase [glutamine 97.9 3.6E-06 1.2E-10 75.5 3.1 107 99-211 46-171 (189)
17 3l7n_A Putative uncharacterize 97.6 1.5E-05 5.1E-10 74.5 1.9 113 96-210 45-183 (236)
18 2a9v_A GMP synthase; structura 97.6 1.4E-05 4.7E-10 73.8 1.1 108 99-211 57-184 (212)
19 1o1y_A Conserved hypothetical 97.4 3.9E-05 1.3E-09 72.1 2.2 112 98-212 59-191 (239)
20 3m3p_A Glutamine amido transfe 97.1 4.4E-05 1.5E-09 72.9 -1.1 111 98-212 50-182 (250)
21 2w7t_A CTP synthetase, putativ 97.0 0.0013 4.6E-08 63.0 7.3 113 94-211 65-238 (273)
22 3uow_A GMP synthetase; structu 96.9 0.00013 4.4E-09 77.0 -0.0 123 99-223 53-226 (556)
23 2vxo_A GMP synthase [glutamine 96.9 0.00024 8.2E-09 77.1 1.6 158 98-261 74-260 (697)
24 1s1m_A CTP synthase; CTP synth 96.8 0.0009 3.1E-08 70.8 4.9 50 98-152 345-396 (545)
25 1gpm_A GMP synthetase, XMP ami 96.8 0.00027 9.1E-09 73.9 0.8 120 98-223 52-198 (525)
26 2ywb_A GMP synthase [glutamine 96.7 0.00029 9.8E-09 73.2 0.6 158 99-262 45-230 (503)
27 2v4u_A CTP synthase 2; pyrimid 96.7 0.0011 3.9E-08 64.0 4.5 108 98-211 92-258 (289)
28 2vpi_A GMP synthase; guanine m 96.6 0.00029 1E-08 65.4 -0.7 117 99-221 70-204 (218)
29 3tqi_A GMP synthase [glutamine 96.3 0.00029 9.9E-09 73.7 -2.5 120 98-222 55-200 (527)
30 1vco_A CTP synthetase; tetrame 96.3 0.0018 6.1E-08 68.6 3.2 54 94-152 353-408 (550)
31 1l9x_A Gamma-glutamyl hydrolas 96.1 0.0004 1.4E-08 68.1 -2.9 115 94-209 84-244 (315)
32 3fij_A LIN1909 protein; 11172J 95.9 0.0034 1.2E-07 59.2 3.0 93 118-211 97-223 (254)
33 4gud_A Imidazole glycerol phos 95.9 0.00023 7.9E-09 64.5 -5.0 55 93-152 38-96 (211)
34 3nva_A CTP synthase; rossman f 94.8 0.013 4.3E-07 62.0 3.1 111 94-210 348-515 (535)
35 2ywj_A Glutamine amidotransfer 94.7 0.0028 9.4E-08 56.4 -1.9 110 97-211 38-170 (186)
36 2ywd_A Glutamine amidotransfer 92.8 0.011 3.9E-07 52.2 -1.5 111 98-212 41-178 (191)
37 1ka9_H Imidazole glycerol phos 92.2 0.0063 2.1E-07 54.8 -4.1 102 99-211 43-183 (200)
38 2nv0_A Glutamine amidotransfer 91.1 0.015 5.1E-07 52.0 -2.8 92 119-213 62-177 (196)
39 3d54_D Phosphoribosylformylgly 89.9 0.056 1.9E-06 48.4 -0.2 94 117-211 67-191 (213)
40 1q7r_A Predicted amidotransfer 89.5 0.017 5.7E-07 53.0 -4.0 91 119-212 84-198 (219)
41 2iss_D Glutamine amidotransfer 89.1 0.043 1.5E-06 49.8 -1.5 90 119-212 81-196 (208)
42 2elc_A Trp D, anthranilate pho 88.7 5.1 0.00017 39.5 12.9 114 106-240 9-143 (329)
43 3r88_A Anthranilate phosphorib 87.8 4.8 0.00016 40.5 12.2 114 106-240 35-171 (377)
44 1o17_A Anthranilate PRT, anthr 84.4 8.5 0.00029 38.2 11.9 113 107-240 13-143 (345)
45 1jvn_A Glutamine, bifunctional 83.2 0.044 1.5E-06 57.7 -5.5 104 119-225 69-214 (555)
46 3h5q_A PYNP, pyrimidine-nucleo 75.0 13 0.00045 38.3 10.0 148 107-279 16-184 (436)
47 1brw_A PYNP, protein (pyrimidi 75.0 11 0.00039 38.6 9.4 116 106-240 12-146 (433)
48 1uou_A Thymidine phosphorylase 72.6 16 0.00055 38.0 10.0 140 106-267 39-198 (474)
49 2dsj_A Pyrimidine-nucleoside ( 72.3 8.6 0.00029 39.5 7.8 118 104-240 10-145 (423)
50 4hkm_A Anthranilate phosphorib 72.2 4.6 0.00016 40.0 5.6 114 106-240 15-150 (346)
51 1vqu_A Anthranilate phosphorib 69.7 5.6 0.00019 40.0 5.6 48 107-171 37-84 (374)
52 1khd_A Anthranilate phosphorib 69.2 5 0.00017 39.9 5.1 113 107-240 23-157 (345)
53 3ol3_A Putative uncharacterize 66.0 24 0.00083 29.8 7.9 71 208-282 26-96 (107)
54 1gpw_B Amidotransferase HISH; 62.8 2.8 9.4E-05 37.2 1.7 104 99-210 45-182 (201)
55 2tpt_A Thymidine phosphorylase 60.6 11 0.00037 38.9 5.8 114 106-240 13-149 (440)
56 2lky_A Uncharacterized protein 54.5 11 0.00039 32.1 4.0 68 208-283 23-90 (112)
57 1j8m_F SRP54, signal recogniti 53.1 1.5E+02 0.0053 28.0 14.3 155 214-382 6-193 (297)
58 2kvc_A Putative uncharacterize 46.1 14 0.00046 31.2 3.1 68 208-283 21-88 (103)
59 2v3c_C SRP54, signal recogniti 46.0 2.5E+02 0.0084 28.3 13.1 156 214-383 7-194 (432)
60 3kl4_A SRP54, signal recogniti 36.4 3.3E+02 0.011 27.6 12.2 167 214-394 5-210 (433)
61 2m0n_A Putative uncharacterize 35.0 33 0.0011 29.2 3.8 74 208-283 23-97 (112)
62 2qgu_A Probable signal peptide 34.8 78 0.0027 28.9 6.7 65 215-286 39-106 (211)
63 3fyb_A Protein of unknown func 30.8 19 0.00064 30.3 1.5 39 224-263 58-98 (104)
64 1vma_A Cell division protein F 30.8 2.2E+02 0.0076 27.1 9.4 151 215-380 30-197 (306)
65 1zu4_A FTSY; GTPase, signal re 30.5 1.5E+02 0.0053 28.4 8.3 110 215-334 18-143 (320)
66 4ex8_A ALNA; alpha/beta/alpha- 28.5 13 0.00043 37.0 0.1 149 250-414 62-243 (316)
67 2o35_A Hypothetical protein DU 27.5 21 0.00072 30.1 1.3 38 224-262 59-98 (105)
68 1l6x_B Minimized B-domain of p 25.5 1.5E+02 0.005 20.3 4.9 32 253-284 2-33 (34)
69 1vkm_A Conserved hypothetical 23.8 57 0.002 32.1 3.8 130 268-414 73-233 (297)
70 5pal_A Parvalbumin; calcium-bi 23.2 1.9E+02 0.0065 21.8 6.1 48 225-281 3-50 (109)
71 2kn2_A Calmodulin; S MAPK phos 23.1 2.2E+02 0.0075 20.7 7.1 48 215-268 31-78 (92)
72 1s6c_A KV4 potassium channel-i 22.2 1.1E+02 0.0037 25.2 4.9 59 220-281 7-65 (183)
73 1ejd_A MURA, EPT, UDP-N-acetyl 22.1 57 0.0019 32.5 3.5 97 257-355 26-137 (419)
74 2h2m_A Protein MURR1, COMM dom 21.5 27 0.00091 29.7 0.8 51 119-175 48-100 (108)
75 1bjf_A Neurocalcin delta; calc 21.4 73 0.0025 26.5 3.6 61 218-281 12-72 (193)
76 1g8i_A Frequenin, neuronal cal 21.2 1.5E+02 0.0053 24.3 5.6 59 218-279 12-70 (190)
No 1
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=100.00 E-value=2.3e-55 Score=439.68 Aligned_cols=196 Identities=17% Similarity=0.232 Sum_probs=175.8
Q ss_pred CccCcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCC
Q 014848 210 PREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPP 289 (417)
Q Consensus 210 ~~~m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~~ 289 (417)
++.|+++++|+++.+|++||++|++++|+.|+ +|+++|+|+|||||++|+||||.||++||++||+++..+++
T Consensus 8 ~~~~~~~~~i~kl~~g~~Lt~eEa~~~~~~il-------~g~~~~~QiaAfL~alr~kget~eEiag~~~am~~~~~~~~ 80 (345)
T 1khd_A 8 PTIFTHQPILEKLFKSQSMTQEESHQLFAAIV-------RGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQPFP 80 (345)
T ss_dssp ----CCHHHHHHHHTTCCCCHHHHHHHHHHHT-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSCCCC
T ss_pred ccccCHHHHHHHHhCCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCC
Confidence 35678899999999999999999999999999 99999999999999999999999999999999999887764
Q ss_pred CCCCCCceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCC-CCCCcHHHHHHhCCCCCCCCHHHHHHHHhhc
Q 014848 290 VADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPP-KGGVTEEQMLKFMGASTNLSVLQAKELLEDE 368 (417)
Q Consensus 290 ~~~~~~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ss-KsGvTsaDvLeaLGi~i~ls~eea~~~Le~~ 368 (417)
.+..+.+|+|||||||.+ ||||||++|+|+|++|++|+|||||+++| |+| ++|+||+||++++++++++.++|++
T Consensus 81 ~~~~~~vD~~gTGGdg~~-tfNiSt~~A~v~Aa~Gv~VakHGnr~~ss~~~G--saDvLeaLGv~~~~~~~~~~~~l~~- 156 (345)
T 1khd_A 81 RPDYDFADIVGTGGDGTN-SINISTASAFVAASCGAKVAKHGNRSVCQPLAG--SCDLLQAFGIRLDMSAEDSRQALDD- 156 (345)
T ss_dssp CCSSCCEEEEECCCCSSC-BCCCHHHHHHHHHHHTCCEEEEECC-----------CHHHHHTTCCTTCCHHHHHHHHHH-
T ss_pred CCCCCeeeecCCCCCCCC-ccchHHHHHHHHHhCCCcEEEeCCCCCCCCccc--HHHHHHhCCCCCCCCHHHHHHHHHH-
Confidence 432135899999999997 99999999999999999999999999999 999 8999999999999999999999999
Q ss_pred CCcEEEEeCCccCHHhhhhHHHhhhhCCCChhhhhhhccCCCCCCcccC
Q 014848 369 EIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRVSHIVY 417 (417)
Q Consensus 369 ~~GfaFL~a~~~~PaL~~l~~lRk~LG~RTifNtlgpLlNPa~a~~~v~ 417 (417)
.||||+++|.|||+|++++++|++||+||+||++|||+||++++++|+
T Consensus 157 -~gi~fl~a~~~hPa~k~l~~~R~~Lg~rTvfn~lgpL~nPa~~~~~v~ 204 (345)
T 1khd_A 157 -LNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALI 204 (345)
T ss_dssp -HSEEEEEHHHHCGGGGGGHHHHHHHCSCCTHHHHGGGCCTTCCSEEEE
T ss_pred -CCEEEEehhhhCHHHHHHHHHHHHhCCCCHHHHHHHhcCCcCCCeEEE
Confidence 899999999999999999999999999999999999999999999874
No 2
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP}
Probab=100.00 E-value=5.3e-55 Score=441.19 Aligned_cols=197 Identities=18% Similarity=0.261 Sum_probs=177.9
Q ss_pred CCccCcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCC
Q 014848 209 DPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPP 288 (417)
Q Consensus 209 ~~~~m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~ 288 (417)
.++.|+++++|+++.+|++||++||+++|+.|+ +|+++|+|+|||||++|+||||.||++||++||++...++
T Consensus 21 ~~~~~~~~~~i~kl~~G~~Lt~eEa~~~~~~il-------~G~~~~~QiaAfL~Alr~kGet~eEiag~~~am~~~~~~~ 93 (374)
T 1vqu_A 21 QESSTSWYLLLQQLIDGESLSRSQAAELMQGWL-------SEAVPPELSGAILTALNFKGVSADELTGMAEVLQSQSKMG 93 (374)
T ss_dssp ----CCTHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTCCC-
T ss_pred CCccCCHHHHHHHHhCCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcc
Confidence 356688999999999999999999999999999 9999999999999999999999999999999999988765
Q ss_pred --------CCCC--CCCceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCCcHHHHHHhCCCCCCCCH
Q 014848 289 --------PVAD--VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSV 358 (417)
Q Consensus 289 --------~~~~--~~~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGvTsaDvLeaLGi~i~ls~ 358 (417)
+.+. .+.+|+|||||||.+ ||||||++|+|+|++|++|+|||||+++||+| ++|+||+||+++++++
T Consensus 94 ~~~~~~~~~~~~~~~~~vD~~gTGGdg~~-tfNiSt~~A~v~Aa~Gv~VaKHGnR~~ss~~G--saDvLEaLGv~~~~~~ 170 (374)
T 1vqu_A 94 TGENYSQLPITNSPFSIIDTCGTGGDGSS-TFNISTAVAFVAAAYGVPVAKHGNRSASSLTG--SADVLEALGVNLGASP 170 (374)
T ss_dssp ----------CCSSSCCEEEEECC---CC-BCCHHHHHHHHHHHTTCCEEEEEECC--CTTC--HHHHHHHTTCCTTCCH
T ss_pred ccccccccCccccCCCeeEEeCCCCCCCC-ccchHHHHHHHHHhCCCCEEEECCCCCCCCCC--HHHHHHhCCCCCCCCH
Confidence 3321 135899999999998 99999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEeCCccCHHhhhhHHHhhhhCCCChhhhhhhccCCCCCCcccC
Q 014848 359 LQAKELLEDEEIGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRVSHIVY 417 (417)
Q Consensus 359 eea~~~Le~~~~GfaFL~a~~~~PaL~~l~~lRk~LG~RTifNtlgpLlNPa~a~~~v~ 417 (417)
+++.++|++ .||||+++|.|||+|++++++|++||+||+||++|||+||+++++||+
T Consensus 171 e~~~~~l~~--~gi~fl~a~~~hPa~k~l~~~R~~lg~rTvfNilgpL~NPa~~~~qv~ 227 (374)
T 1vqu_A 171 EKVQAALQE--VGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGPLVNPLRPTGQVV 227 (374)
T ss_dssp HHHHHHHHH--TSEEEEEETTSSGGGGGGHHHHHHHCSCCHHHHHGGGCCTTCCSEEEE
T ss_pred HHHHHHHHH--CCEEEEEhHHhCHHHHHHHHHHHHhCCCCHHHHHHHhcCCCCCCceEE
Confidence 999999999 899999999999999999999999999999999999999999999874
No 3
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=100.00 E-value=1.1e-54 Score=432.07 Aligned_cols=189 Identities=20% Similarity=0.284 Sum_probs=180.0
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 014848 217 GALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSL 296 (417)
Q Consensus 217 ~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~~~~~~~~L 296 (417)
++|+++.+|++||++|++++|+.|+ +|+++|+|+|||||++|+||||.||++||++||+++..+++.+..+.+
T Consensus 2 ~~l~k~~~g~~Lt~eEa~~~~~~i~-------~g~~~~~QiaAfL~alr~kget~~Eiag~~~am~~~~~~~~~~~~~~v 74 (329)
T 2elc_A 2 DAVKKAILGEVLEEEEAYEVMRALM-------AGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLL 74 (329)
T ss_dssp CHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCCCCSSEE
T ss_pred hHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCCCCCee
Confidence 4799999999999999999999999 999999999999999999999999999999999999877644312358
Q ss_pred eeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCCcHHHHHHhCCCCCCCCHHHHHHHHhhcCCcEEEEe
Q 014848 297 THYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGFAYVS 376 (417)
Q Consensus 297 D~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGvTsaDvLeaLGi~i~ls~eea~~~Le~~~~GfaFL~ 376 (417)
|+|||||||.+ ||||||++|+|+|++|++|+|||||+++||+| ++|+||+||++++++++++.++|++ .||+|++
T Consensus 75 D~~gTGGdg~~-tfNiSt~~a~v~Aa~Gv~V~kHGnr~~ss~~G--saDvLeaLG~~~~~~~~~~~~~l~~--~g~~fl~ 149 (329)
T 2elc_A 75 DIVGTGGDGKG-LMNLSTLAALVAAAGGVAVAKHGNRAASSRAG--SADLLEALGVDLEAPPERVGEAIEE--LGFGFLF 149 (329)
T ss_dssp EEEECCCCSSC-CCCCHHHHHHHHHHTTCEEEEEECCCTTTTCS--HHHHHHHTTCCTTCCHHHHHHHHHH--HSEEEEE
T ss_pred EEcCCCCCCCC-ccccHHHHHHHHHhCCCCEEEeCCCCCCCccc--HHHHHHhCCCCCCCCHHHHHHHHHH--CCEEEEE
Confidence 99999999998 99999999999999999999999999999999 8999999999999999999999999 8999999
Q ss_pred CCccCHHhhhhHHHhhhhCCCChhhhhhhccCCCCCCcccC
Q 014848 377 LREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRVSHIVY 417 (417)
Q Consensus 377 a~~~~PaL~~l~~lRk~LG~RTifNtlgpLlNPa~a~~~v~ 417 (417)
+|.|||+|++++++|++||+||+||++|||+||+++++||+
T Consensus 150 a~~~hPa~k~~~~~R~~lg~rTvfn~lgpL~nPa~~~~~v~ 190 (329)
T 2elc_A 150 ARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAGADAYVL 190 (329)
T ss_dssp HHHHCGGGGGTHHHHHHHCSCCHHHHHTTTCCTTCCCEEEE
T ss_pred hHHhCHHHHHHHHHHHHhCCCCHHHHHHHhcCccCCceeEE
Confidence 99999999999999999999999999999999999999874
No 4
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=100.00 E-value=1.1e-54 Score=434.85 Aligned_cols=190 Identities=18% Similarity=0.252 Sum_probs=178.9
Q ss_pred CcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCCC
Q 014848 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (417)
Q Consensus 213 m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~~~~~ 292 (417)
|+++++|+++.+|++||+||++++|+.|+ +|+++|+|+|||||++|+||||.||++||++||+++..+++.+
T Consensus 1 m~~~~~i~k~~~g~~Lt~eEa~~~~~~i~-------~g~~~~~QiaAfL~alr~kget~eEiag~~~am~~~~~~~~~~- 72 (345)
T 1o17_A 1 MNINEILKKLINKSDLEINEAEELAKAII-------RGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVP- 72 (345)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCCT-
T ss_pred CCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCCC-
Confidence 67899999999999999999999999999 9999999999999999999999999999999999998776443
Q ss_pred CCCceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCCcHHHHHHhCCCCCCCCHHHHHHHHhhcCCcE
Q 014848 293 VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEIGF 372 (417)
Q Consensus 293 ~~~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGvTsaDvLeaLGi~i~ls~eea~~~Le~~~~Gf 372 (417)
+.+|+|||||||++ ||||||++|+|+|++ ++|+|||||+++||+| ++|+||+||++++++++++.++|++ .||
T Consensus 73 -~~vD~~gTGGdg~~-tfNiSt~~A~v~Aa~-v~VaKHGnR~~ss~~G--saDvLEaLGv~~~~~~e~~~~~l~~--~gi 145 (345)
T 1o17_A 73 -NAIDTAGTGGDGLG-TVNVSTASAILLSLV-NPVAKHGNRAVSGKSG--SADVLEALGYNIIVPPERAKELVNK--TNF 145 (345)
T ss_dssp -TCEECCC----CCC-BCCHHHHHHHHHTTT-SCEEEEECCCSSSSCS--HHHHHHHHTBCCCCCHHHHHHHHHH--HSE
T ss_pred -CceeeCCCCCCCCC-ccchHHHHHHHHHHc-CCEEEECCCCCCCccc--HHHHHHhCCCCCCCCHHHHHHHHHH--cCE
Confidence 36899999999998 999999999999999 9999999999999999 8999999999999999999999999 899
Q ss_pred EEEeCCccCHHhhhhHHHhhhhCCCChhhhhhhccCCCCCCcccC
Q 014848 373 AYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRVSHIVY 417 (417)
Q Consensus 373 aFL~a~~~~PaL~~l~~lRk~LG~RTifNtlgpLlNPa~a~~~v~ 417 (417)
||+++|.|||+|++++++|++||+||+||++|||+||+++++||+
T Consensus 146 ~fl~a~~~hPa~k~l~~~R~~lg~rTvfN~lgpL~nPa~~~~ql~ 190 (345)
T 1o17_A 146 VFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLM 190 (345)
T ss_dssp EEEEHHHHCGGGGGTHHHHHHHCSCCGGGGCGGGCCTTCCSEEEE
T ss_pred EEEehHHhChHHHHHHHHHHHhCCCCHHHHHHHhcCccCCCeEEE
Confidence 999999999999999999999999999999999999999999874
No 5
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.2e-54 Score=434.07 Aligned_cols=195 Identities=19% Similarity=0.249 Sum_probs=170.5
Q ss_pred ccCcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCCC
Q 014848 211 REMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPV 290 (417)
Q Consensus 211 ~~m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~~~ 290 (417)
+.|.++++|+++.+|++||+|||+++|+.|+ +|+++|+|+||||||+|+||||.||++||++||+++..+++.
T Consensus 2 m~~~~~e~l~~~~~~~~Lt~eEa~~~~~~il-------~G~~~d~QiaAfL~alr~kget~eEi~g~~~am~~~~~~v~~ 74 (346)
T 4hkm_A 2 MPITPQQALQRTIEHREIFHDEMVDLMRQIM-------RGEVSDAMVSAILTGLRVKKETIGEIAGAATVMREFSRRVEV 74 (346)
T ss_dssp -CCCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCC
T ss_pred CCCCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhCCCCCC
Confidence 5678899999999999999999999999999 999999999999999999999999999999999998877654
Q ss_pred CCCC-CceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCCcHHHHHHhCCCCCCCCHHHHHHHHhhcC
Q 014848 291 ADVK-SLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEE 369 (417)
Q Consensus 291 ~~~~-~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGvTsaDvLeaLGi~i~ls~eea~~~Le~~~ 369 (417)
++.. .+|+|||||||++ ||||||++|+|+|++|++|+|||||+++||+| ++|+||+||+++++++++++++|++
T Consensus 75 ~~~~~~vD~~gTGGdg~~-t~niSt~~a~v~Aa~G~~V~khG~r~~ss~~G--saD~LeaLG~~~~ls~~~~~~~l~~-- 149 (346)
T 4hkm_A 75 TDRRHMVDIVGTGGDGSH-TFNISTCAMFVAAAGGAKVAKHGNRSVSSKSG--SADALEALGAVIELQPEQVAASLAQ-- 149 (346)
T ss_dssp SCCTTEEEEECC-------CCCHHHHHHHHHHHTTCEEEEEC-----------CHHHHHTTTCCCCCCHHHHHHHHHH--
T ss_pred CCCccceeecCCCCCCcc-ccCcHHHHHHHHHhcCCCeeecCCCCCCCCcC--HHHHHHHcCCCcccCHHHHHHHHHh--
Confidence 4322 4799999999998 99999999999999999999999999999999 8999999999999999999999999
Q ss_pred CcEEEEeCCccCHHhhhhHHHhhhhCCCChhhhhhhccCCCCCCcccC
Q 014848 370 IGFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRVSHIVY 417 (417)
Q Consensus 370 ~GfaFL~a~~~~PaL~~l~~lRk~LG~RTifNtlgpLlNPa~a~~~v~ 417 (417)
.||||++||.|||+|++++++|++||+||+||+++||+||++++++|+
T Consensus 150 ~g~~fl~a~~~~Pa~k~l~~~R~~lg~rT~fn~lgpL~nPa~~~~~v~ 197 (346)
T 4hkm_A 150 TGIGFMYAPVHHPAMKVVAPVRREMGVRTIFNILGPLTNPAGSPNILM 197 (346)
T ss_dssp HSEEEECHHHHCGGGGGTHHHHHHHCSCCTHHHHGGGCCTTCCSEEEE
T ss_pred cCcchhchhhhChhHHHHhhheeccCCCchhhhcccccCCCCCcceEe
Confidence 899999999999999999999999999999999999999999999874
No 6
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=100.00 E-value=3.2e-54 Score=435.90 Aligned_cols=193 Identities=15% Similarity=0.157 Sum_probs=184.4
Q ss_pred CcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCCC
Q 014848 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (417)
Q Consensus 213 m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~~~~~ 292 (417)
.+|.++|+++.+|++||+|||+++|+.|+ +|+++|+|+||||||+|+||||.||++||++||+++..+++...
T Consensus 24 ~t~~~il~~l~~g~~Ls~eEa~~~~~~i~-------~G~~~~~QiaAfL~Alr~kGet~eEi~g~~~am~~~~~~v~~~~ 96 (377)
T 3r88_A 24 PSWPQILGRLTDNRDLARGQAAWAMDQIM-------TGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHPLPADT 96 (377)
T ss_dssp CCHHHHHHHHHTTCCCCTTHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHSCCCCTTC
T ss_pred CCHHHHHHHHHCCCCCCHHHHHHHHHHHH-------CCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHhCCcCCCcc
Confidence 47999999999999999999999999999 99999999999999999999999999999999999887765432
Q ss_pred --CCCceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCCcHHHHHHhCCCCCCCCHHHHHHHHhhcCC
Q 014848 293 --VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMGASTNLSVLQAKELLEDEEI 370 (417)
Q Consensus 293 --~~~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGvTsaDvLeaLGi~i~ls~eea~~~Le~~~~ 370 (417)
.+.+|+|||||||++ ||||||++|+|+|++|++|+|||||+++||+| ++|+||+||++++++++++.++|++ .
T Consensus 97 ~~~~~vD~~gTGGdg~~-T~niSt~~A~v~Aa~Gv~VaKHGnR~~ss~~G--saDvLEaLGv~~~l~~e~~~~~l~~--~ 171 (377)
T 3r88_A 97 VPDDAVDVVGTGGDGVN-TVNLSTMAAIVVAAAGVPVVKHGNRAASSLSG--GADTLEALGVRIDLGPDLVARSLAE--V 171 (377)
T ss_dssp SCTTCEEEEECCCCSCC-BCCHHHHHHHHHHHTTCCEEEEECCCSSSSCC--HHHHHHHTTCCCCCCHHHHHHHHHH--H
T ss_pred CCCCCeEEeCCCCCCcC-ccccHHHHHHHHHhcCCeEEeECCCCCCCccc--HHHHHHHcCCCcccchHHHHHHHHH--h
Confidence 235899999999998 99999999999999999999999999999999 8999999999999999999999999 8
Q ss_pred cEEEEeCCccCHHhhhhHHHhhhhCCCChhhhhhhccCCCCCCcccC
Q 014848 371 GFAYVSLREARPSLYSLIGLREHIKKRPPVATSEKVQQFVRVSHIVY 417 (417)
Q Consensus 371 GfaFL~a~~~~PaL~~l~~lRk~LG~RTifNtlgpLlNPa~a~~~v~ 417 (417)
||+|++||.|||+|++++++|++||+||+||++|||+||+++++||+
T Consensus 172 gi~fl~a~~~hPa~k~l~~vR~~Lg~rTifN~lgpL~NPa~~~~~li 218 (377)
T 3r88_A 172 GIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLI 218 (377)
T ss_dssp SEEEEEHHHHCGGGHHHHHHHHHHCSCCGGGGHHHHCCTTCCSEEEE
T ss_pred ccccccchhhCHHHHHHHHHHHHhccCchhhhHHHhcCccccccccc
Confidence 99999999999999999999999999999999999999999999874
No 7
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=100.00 E-value=4.1e-47 Score=388.82 Aligned_cols=190 Identities=15% Similarity=0.145 Sum_probs=178.8
Q ss_pred CcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCCC
Q 014848 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (417)
Q Consensus 213 m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~~~~~ 292 (417)
|+++++|+++.+|++||++|++++|+.|+ +|+++|+|+||||||+|+||||.+|++||++||++...+++.+.
T Consensus 1 m~~~~~i~k~~~g~~Lt~eEa~~~~~~i~-------~G~~~d~QiaAfL~Al~~kGet~eEiag~a~aM~~~~~~l~~~~ 73 (423)
T 2dsj_A 1 MNPVAFIREKREGKKHRREDLEAFLLGYL-------RDEVPDYQVSAWLMAAFLRGLDPEETLWLTETMARSGKVLDLSG 73 (423)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTSSBCCCCTT
T ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCccc
Confidence 67899999999999999999999999999 99999999999999999999999999999999998876654432
Q ss_pred C-CCceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCCcHHHHHHhC-CCCCCCCHHHHHHHHhhcCC
Q 014848 293 V-KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEEI 370 (417)
Q Consensus 293 ~-~~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGvTsaDvLeaL-Gi~i~ls~eea~~~Le~~~~ 370 (417)
. ..+|+|||||||+ ||||++|+|+|+||++|+|||||+++|++| ++|+||+| |++++++++++.++|++ .
T Consensus 74 ~~~~vD~~gTGGdG~----niSt~~a~vvAa~Gv~VaKhGnR~~ss~~G--saDvLEaL~Gv~i~l~~e~~~~~l~~--~ 145 (423)
T 2dsj_A 74 LPHPVDKHSSGGVGD----KVSLVVGPILAASGCTFAKMSGRGLAHTGG--TIDKLESVPGWRGEMTEAEFLERARR--V 145 (423)
T ss_dssp SSSBEEEEEESSSCC----STHHHHHHHHHTTTCBEEEECCCCBTTBCC--HHHHHTTSTTCCCCCCHHHHHHHHHH--T
T ss_pred cCCceeEecCCCCCc----cHHHHHHHHHHhCCCcEEEECCCCCCCCcc--HHHHHHhCCCCCCCCCHHHHHHHHHH--c
Confidence 1 1489999999988 599999999999999999999999999999 99999999 99999999999999999 8
Q ss_pred cEEEEeC-CccCHHhhhhHHHhhhhC-CCChhhhhhhccC---CCCCCcccC
Q 014848 371 GFAYVSL-REARPSLYSLIGLREHIK-KRPPVATSEKVQQ---FVRVSHIVY 417 (417)
Q Consensus 371 GfaFL~a-~~~~PaL~~l~~lRk~LG-~RTifNtlgpLlN---Pa~a~~~v~ 417 (417)
||||+++ +.|||+|++++++|++|| +||+||+++||+| |+++++||+
T Consensus 146 Gi~f~~~~~~~~PA~k~l~~lR~~lgtv~Ti~nilgpl~nkK~pag~~~~vl 197 (423)
T 2dsj_A 146 GLVIAAQSPDLAPLDGKLYALRDVTATVESVPLIASSIMSKKLAAGARSIVL 197 (423)
T ss_dssp SEEEESCGGGBSHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CEEEEecccccChHHHHHHHHHHHhcccCcHHHhHHHHhcCccCCCCCeEEE
Confidence 9999888 799999999999999999 8999999999999 999999874
No 8
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=100.00 E-value=5.1e-46 Score=381.93 Aligned_cols=186 Identities=18% Similarity=0.189 Sum_probs=174.2
Q ss_pred CcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCCC
Q 014848 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (417)
Q Consensus 213 m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~~~~~ 292 (417)
|+++++|+++.+|++||++|++++|+.|+ +|+++|+|+|||||++|+||||.||++||++||+++..+++.+.
T Consensus 1 m~~~~~i~k~~~g~~Lt~eEa~~~~~~i~-------~G~~sd~QiaAfL~Alr~kGet~eEiag~a~AM~~~~~~v~~~~ 73 (433)
T 1brw_A 1 MRMVDLIAKKRDGKALTKEEIEWIVRGYT-------NGDIPDYQMSALAMAIYFRGMTEEETAALTMAMVQSGEMLDLSS 73 (433)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------TTSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSCCCCCTT
T ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCccc
Confidence 67899999999999999999999999999 99999999999999999999999999999999999887765432
Q ss_pred --CCCceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCCcHHHHHHhC-CCCCCCCHHHHHHHHhhcC
Q 014848 293 --VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEE 369 (417)
Q Consensus 293 --~~~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGvTsaDvLeaL-Gi~i~ls~eea~~~Le~~~ 369 (417)
.+.+|+|||||||++ |||++|+|+|++|++|+|||||+++|++| ++|+||+| |++++++++++.++|++
T Consensus 74 ~~~~~vD~~gTGGdG~~----iSt~~A~vvAa~Gv~VaKHGnRa~ss~~G--saDvLEaL~Gv~i~ls~e~~~~~l~~-- 145 (433)
T 1brw_A 74 IRGVKVDKHSTGGVGDT----TTLVLGPLVASVGVPVAKMSGRGLGHTGG--TIDKLESVPGFHVEISKDEFIRLVNE-- 145 (433)
T ss_dssp SCSCCEEEEECCCSSCC----HHHHHHHHHHTTTCCEEEEECCCBTTBCC--HHHHHTTSTTCCCCCCHHHHHHHHHH--
T ss_pred ccCCceeeCCCCCCCcc----hHHHHHHHHHhCCCcEEEECCCCCCCCCC--HHHHHHHCcCceecCCHHHHHHHHHH--
Confidence 136899999999987 99999999999999999999999999999 89999999 99999999999999999
Q ss_pred CcEEEEeCC-ccCHHhhhhHHHhhhhCCCChhhhhhhccCC--------CCCCcccC
Q 014848 370 IGFAYVSLR-EARPSLYSLIGLREHIKKRPPVATSEKVQQF--------VRVSHIVY 417 (417)
Q Consensus 370 ~GfaFL~a~-~~~PaL~~l~~lRk~LG~RTifNtlgpLlNP--------a~a~~~v~ 417 (417)
+||||++++ .|||+|++++++|++| ||+||+ ||+|| .+++++|+
T Consensus 146 ~Gi~fl~a~~~~hPA~k~l~~lR~~l--rTvfNi--PLin~s~lskklA~G~~~~Vl 198 (433)
T 1brw_A 146 NGIAIIGQTGDLTPADKKLYALRDVT--ATVNSI--PLIASSIMSKKIAAGADAIVL 198 (433)
T ss_dssp HSEEEEECCTTSCHHHHHHHHHHHHH--TCCCCH--HHHHHHHHHHHHHHCCSEEEE
T ss_pred cCeeEecCchhhCHHHHHHHHHHHhh--CCccCh--hhcCcHhhHHHHhcCCCEEEE
Confidence 899999995 8999999999999999 899999 99999 67777663
No 9
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=100.00 E-value=1.2e-45 Score=379.82 Aligned_cols=185 Identities=14% Similarity=0.138 Sum_probs=174.0
Q ss_pred CcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCCC
Q 014848 213 MRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVAD 292 (417)
Q Consensus 213 m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~~~~~ 292 (417)
|+++++|+++.+|++||++|++++|+.|+ +|+++|+|+|||||++|+||||.||++||++||++...+++.+.
T Consensus 2 m~~~~~i~k~~~g~~Lt~eEa~~~~~~i~-------~G~~sd~QiaAfL~Alr~kGet~eEiag~~~Am~~~~~~~~~~~ 74 (440)
T 2tpt_A 2 FLAQEIIRKKRDGHALSDEEIRFFINGIR-------DNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKS 74 (440)
T ss_dssp CCHHHHHHHHHTTCCCCHHHHHHHHHHHH-------HTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSBCCCCTT
T ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcCCCcc
Confidence 67899999999999999999999999999 99999999999999999999999999999999999887665433
Q ss_pred --C--CCceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCCcHHHHHHhC-CCCCCCCHHHHHHHHhh
Q 014848 293 --V--KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLED 367 (417)
Q Consensus 293 --~--~~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGvTsaDvLeaL-Gi~i~ls~eea~~~Le~ 367 (417)
. +.+|+|||||||++ |||++|+|+|++|++|+|||||+++|++| ++|+||+| |++++++++++.++|++
T Consensus 75 ~~~~~~~vD~~gTGGdG~~----iSt~~A~vvAa~Gv~VaKHGnR~~ss~~G--saDvLEaL~Gv~~~ls~e~~~~~l~~ 148 (440)
T 2tpt_A 75 LHLNGPIVDKHSTGGVGDV----TSLMLGPMVAACGGYIPMISGRGLGHTGG--TLDKLESIPGFDIFPDDNRFREIIKD 148 (440)
T ss_dssp TTCSSCBEEEEECCCSSCC----HHHHHHHHHHHTTCBEEEEECCCCTTSCC--HHHHHTTSTTCCSCCCHHHHHHHHHH
T ss_pred cccCCCeeeeCCCCCCCcc----HHHHHHHHHHhCCCcEEEECCCCCCCccc--HHHHHHhCcCCCCCCCHHHHHHHHHH
Confidence 1 35899999999988 99999999999999999999999999999 89999999 99999999999999999
Q ss_pred cCCcEEEEeC-CccCHHhhhhHHHhhhhCCCChhhhhhhccCC--------CCCCccc
Q 014848 368 EEIGFAYVSL-REARPSLYSLIGLREHIKKRPPVATSEKVQQF--------VRVSHIV 416 (417)
Q Consensus 368 ~~~GfaFL~a-~~~~PaL~~l~~lRk~LG~RTifNtlgpLlNP--------a~a~~~v 416 (417)
+||||+++ +.|||+|++++++|++| ||+||+ ||+|| .+++++|
T Consensus 149 --~G~~fl~a~~~~hPA~k~l~~lR~~l--rTvfNi--PLin~s~lskk~A~G~~alV 200 (440)
T 2tpt_A 149 --VGVAIIGQTSSLAPADKRFYATRDIT--ATVDSI--PLITASILAKKLAEGLDALV 200 (440)
T ss_dssp --TSEEEEECCTTBSHHHHHHHHHHHHT--TCCCCH--HHHHHHHHHHHHTTCCSEEE
T ss_pred --cCEEEEcCchhhCHHHHHHHHHHHhh--CCccCh--hhcCCHHHHHHHhcCCCeEE
Confidence 89999999 78999999999999999 999999 99999 6666655
No 10
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=100.00 E-value=4e-45 Score=375.37 Aligned_cols=187 Identities=16% Similarity=0.153 Sum_probs=175.9
Q ss_pred cCcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCC
Q 014848 212 EMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVA 291 (417)
Q Consensus 212 ~m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~~~~ 291 (417)
.|+++++|+++.+|++||++|++++|+.|+ +|+++|+|+|||||++|+||||.||++||++||+++..+++.+
T Consensus 3 ~m~~~~~I~kl~~g~~Lt~eEa~~~~~~i~-------~G~~sd~QiaAfL~Alr~kGet~eEiag~~~Am~~~~~~~~~~ 75 (436)
T 3h5q_A 3 AMRMIDIIEKKRDGHTLTTEEINFFIGGYV-------KGDIPDYQASSLAMAIYFQDMNDDERVALTMAMVNSGDMIDLS 75 (436)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHH-------HTSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTSCCCCCT
T ss_pred CCCHHHHHHHHHcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcCCcc
Confidence 478999999999999999999999999999 9999999999999999999999999999999999887765443
Q ss_pred C--CCCceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCCcHHHHHHhC-CCCCCCCHHHHHHHHhhc
Q 014848 292 D--VKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDE 368 (417)
Q Consensus 292 ~--~~~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGvTsaDvLeaL-Gi~i~ls~eea~~~Le~~ 368 (417)
. .+.+|+|||||||++ +||++|+|+|++|++|+|||||+++|++| ++|+||+| |++++++++++.++|++
T Consensus 76 ~~~~~~vD~~gTGGdG~~----tSt~~A~vvAa~Gv~VaKHGnRa~ss~~G--saDvLEaLpGi~~~ls~e~~~~~l~~- 148 (436)
T 3h5q_A 76 DIKGVKVDKHSTGGVGDT----TTLVLAPLVAAVDVPVAKMSGRGLGHTGG--TIDKLEAIDGFHVEIDEATFVKLVNE- 148 (436)
T ss_dssp TSCSCCEEEEECCCTTCC----HHHHHHHHHHHTTCCEEEECCCCSSSSCC--HHHHHTTSTTCCCCCCHHHHHHHHHH-
T ss_pred ccCCCceeecCCCCCCCC----hHHHHHHHHHhCCCCEEeECCCCCCCccc--HHHHHHhCcCCCCCCCHHHHHHHHHH-
Confidence 2 235899999999998 49999999999999999999999999999 89999999 99999999999999999
Q ss_pred CCcEEEEe-CCccCHHhhhhHHHhhhhCCCChhhhhhhccC--------CCCCCcccC
Q 014848 369 EIGFAYVS-LREARPSLYSLIGLREHIKKRPPVATSEKVQQ--------FVRVSHIVY 417 (417)
Q Consensus 369 ~~GfaFL~-a~~~~PaL~~l~~lRk~LG~RTifNtlgpLlN--------Pa~a~~~v~ 417 (417)
.||+|++ ++.|||+|++++++|++ +||+||+ ||+| |++++++|+
T Consensus 149 -~g~~fl~~a~~~~Pa~~~l~~lR~~--~~Tvfni--PLinaSimSKKlpag~~~~vl 201 (436)
T 3h5q_A 149 -NKVAVVGQSGNLTPADKKLYALRDV--TGTVNSI--PLIASSIMSKKIAAGADAIVL 201 (436)
T ss_dssp -HSEEEECCCSSSCHHHHHHHHHHHT--TTCSSCH--HHHHHHHHHHHHHTTCSEEEE
T ss_pred -cCCEEEccccccCHHHHHHHHHHhc--cCCcCCh--hhhccchhccccccCCCeEEE
Confidence 8999998 69999999999999999 7999999 9999 999999875
No 11
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=100.00 E-value=4.8e-45 Score=378.02 Aligned_cols=185 Identities=17% Similarity=0.165 Sum_probs=173.1
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCCCC
Q 014848 214 RLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADV 293 (417)
Q Consensus 214 ~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~~~~~~ 293 (417)
+++++|+++.+|++||++|++++|+.|+ +|+++|+|+||||||+|+||||.||++||++||++...+++.+..
T Consensus 29 ~~~~iI~k~~~g~~Lt~eEa~~~~~~i~-------~G~~sd~QiaAfLmAlr~kGeT~eEiag~a~AMr~~~~~v~~~~~ 101 (474)
T 1uou_A 29 QLPELIRMKRDGGRLSEADIRGFVAAVV-------NGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEA 101 (474)
T ss_dssp CHHHHHHHHHTTCCCCHHHHHHHHHHHH-------HTCSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTTSCCCCCCGG
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcCCcccc
Confidence 4899999999999999999999999999 999999999999999999999999999999999998876654321
Q ss_pred ---CCceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCCcHHHHHHhC-CCCCCCCHHHHHHHHhhcC
Q 014848 294 ---KSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFM-GASTNLSVLQAKELLEDEE 369 (417)
Q Consensus 294 ---~~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGvTsaDvLeaL-Gi~i~ls~eea~~~Le~~~ 369 (417)
+.+|+|||||||++ |||++|+|+|++|++|+|||||+++|++| ++|+||+| |++++++++++.++|++
T Consensus 102 ~~~~~vD~~gTGGdG~~----iSt~~A~vvAa~Gv~VaKHGnRa~ss~~G--SaDvLEaLpGv~i~ls~e~~~~~l~~-- 173 (474)
T 1uou_A 102 WRQQLVDKHSTGGVGDK----VSLVLAPALAACGCKVPMISGRGLGHTGG--TLDKLESIPGFNVIQSPEQMQVLLDQ-- 173 (474)
T ss_dssp GGGGBEEEEESCCTTCC----HHHHHHHHHHTTTCBEEEECCCCBTTBCC--HHHHHTTSTTCCCCCCHHHHHHHHHH--
T ss_pred cCCCeeEeCCCCCCCce----eHHHHHHHHHhCCCCEEEECCCCCCCCCC--HHHHHHhCCCCCCCCCHHHHHHHHHH--
Confidence 35899999999998 99999999999999999999999999999 89999999 99999999999999999
Q ss_pred CcEEEEeC-CccCHHhhhhHHHhhhhCCCChhhhhhhccCC--------CCCCcccC
Q 014848 370 IGFAYVSL-REARPSLYSLIGLREHIKKRPPVATSEKVQQF--------VRVSHIVY 417 (417)
Q Consensus 370 ~GfaFL~a-~~~~PaL~~l~~lRk~LG~RTifNtlgpLlNP--------a~a~~~v~ 417 (417)
+||||+++ +.|||+|++++++|+++ ||+||+ ||+|| ..++++|+
T Consensus 174 ~Gi~fl~a~~~~hPA~k~l~~lR~~l--rTvfNi--PLinpsi~skklA~g~~~~Vl 226 (474)
T 1uou_A 174 AGCCIVGQSEQLVPADGILYAARDVT--ATVDSL--PLITASILSKKLVEGLSALVV 226 (474)
T ss_dssp HSEEEECCCSSSSHHHHHHHHHHHHT--TCSSCH--HHHHHHHHHHHHHTTCSEEEE
T ss_pred cCeEEecCchhhCHHHHHHHHHHhhh--CCccch--hhcCcHHHHHHHhhcCCeEEE
Confidence 89999999 58999999999999994 999999 99999 67776653
No 12
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=98.46 E-value=3.8e-08 Score=89.35 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=82.5
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHhhccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHHH------HHH
Q 014848 98 AKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGERR------AMN 170 (417)
Q Consensus 98 ~~v~~gp~~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~------~~~ 170 (417)
-.|+++||+..|-..++.+...+. +|.+....|.+| |+|+|.|..+||+.+.+. ..++|+.|.+.+.+ .+.
T Consensus 47 dglil~gG~~~~~~~~~~~~~~~~-i~~~~~~~PvLGIC~G~QlL~~~~gg~v~~~-~~~~~g~~~~v~~~~~~~~~l~~ 124 (195)
T 1qdl_B 47 DRLIISPGPGTPEKREDIGVSLDV-IKYLGKRTPILGVCLGHQAIGYAFGAKIRRA-RKVFHGKISNIILVNNSPLSLYY 124 (195)
T ss_dssp SEEEECCCSSCTTSHHHHTTHHHH-HHHHTTTSCEEEETHHHHHHHHHTTCEEEEE-EEEEEEEEEEEEECCSSCCSTTT
T ss_pred CEEEECCCCCChhhhhhhhHHHHH-HHHhcCCCcEEEEehHHHHHHHHhCCEEecc-CCCcCCCceEEEECCCCHhHHHh
Confidence 468899999988666555555566 777878899999 999999999999998887 55678888632211 111
Q ss_pred hhhhh---------hhhhCCCceEEEe-C-CCCccccCCCCC----CCccCCCCCc
Q 014848 171 TFWPL---------LMRALPPDVIFIA-D-PEGSIMGGGGSI----GPHYSGNDPR 211 (417)
Q Consensus 171 ~~~~~---------l~~~Lp~~~~f~a-~-~~G~iMg~~~~~----G~qf~~~~~~ 211 (417)
.+... -+..+|+.+.++| + ++|.|+++.++. |+||+|+...
T Consensus 125 ~~~~~~~v~~~H~~~v~~l~~~~~vla~s~~~g~i~a~~~~~~~~~gvQfHPE~~~ 180 (195)
T 1qdl_B 125 GIAKEFKATRYHSLVVDEVHRPLIVDAISAEDNEIMAIHHEEYPIYGVQFHPESVG 180 (195)
T ss_dssp TCCSEEEEEEEEEEEEECCCTTEEEEEEESSSCCEEEEEESSSSEEEESSBTTSTT
T ss_pred cCCCceEEeccccchhhhCCCCcEEEEEECCCCcEEEEEeCCCCEEEEecCCCCCC
Confidence 11100 0147888999987 6 799999999875 9999997665
No 13
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=98.31 E-value=9e-08 Score=102.80 Aligned_cols=108 Identities=15% Similarity=0.109 Sum_probs=80.4
Q ss_pred cceeeCCCCCCCCChhhhh--hhHHHHHHHh-hccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhh
Q 014848 98 AKVCTGPTQTRPLREDEAF--KVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFW 173 (417)
Q Consensus 98 ~~v~~gp~~~~Pl~~~~a~--~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~ 173 (417)
-.|+++|||+.|-++.+-. .+.+. |+++ ...+|.+| |+|||.|..+||+.+.+. +.+.||..+. +.+++
T Consensus 488 DgIIlsGGPg~p~d~~~p~i~~~~~l-I~~a~~~~iPiLGIClG~QlLa~alGG~V~~~-~~~~~G~~~~-----i~~~~ 560 (645)
T 3r75_A 488 DVVVMGPGPGDPSDAGDPRIARLYAW-LRHLIDEGKPFMAVCLSHQILNAILGIPLVRR-EVPNQGIQVE-----IDLFG 560 (645)
T ss_dssp SEEEECCCSSCTTCTTSHHHHHHHHH-HHHHHHHTCCEEEETHHHHHHHHHTTCCEEEE-EEEEEEEEEE-----EEETT
T ss_pred CEEEECCCCCChhhhhhhhHHHHHHH-HHHHHHCCCCEEEECHHHHHHHHHhCCEEEcC-CCcccccceE-----Eeeec
Confidence 5799999999994443211 23444 6664 56899999 999999999999999998 7788876552 22222
Q ss_pred hhhh-----------------hhCCCceEEEe-CCCCccccCCCCC--CCccCCCCCcc
Q 014848 174 PLLM-----------------RALPPDVIFIA-DPEGSIMGGGGSI--GPHYSGNDPRE 212 (417)
Q Consensus 174 ~~l~-----------------~~Lp~~~~f~a-~~~G~iMg~~~~~--G~qf~~~~~~~ 212 (417)
..++ ..+|+.+.+++ +++|.||+++|+. |+||||++...
T Consensus 561 ~~l~~~~~~~~~v~~~h~~~~~~lp~g~~v~A~s~dg~i~Ai~~~~~~GVQFHPE~~~t 619 (645)
T 3r75_A 561 QRERVGFYNTYVAQTVRDEMDVDGVGTVAISRDPRTGEVHALRGPTFSSMQFHAESVLT 619 (645)
T ss_dssp EEEEEEEEEEEEEBCSCSEEEETTTEEEEEEECTTTCBEEEEEETTEEEESSBTTSTTC
T ss_pred CcceecCCCcEEEEEehhhccccCCCCeEEEEEcCCCcEEEEEcCCEEEEEeCCeecCC
Confidence 1111 24888999998 8899999999988 99999986543
No 14
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=98.29 E-value=2.1e-07 Score=84.11 Aligned_cols=107 Identities=13% Similarity=0.082 Sum_probs=73.6
Q ss_pred eeeCCCCCCCCChhhhhhhHHHHHHHhhccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHH---HHHHHhhhhh
Q 014848 100 VCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGE---RRAMNTFWPL 175 (417)
Q Consensus 100 v~~gp~~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~e---~~~~~~~~~~ 175 (417)
++++|||+.| .+.+. ...+++.+...+|.+| |+|+|.|..++|+.+.+. ..+.++..+.-. ...+..+...
T Consensus 51 iil~gGpg~~---~~~~~-~~~l~~~~~~~~PilGIC~G~Qll~~~~Gg~v~~~-~~~~~g~~~~~~~~~~~l~~~~~~~ 125 (192)
T 1i1q_B 51 LMLSPGPGVP---SEAGC-MPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQA-GEILHGKATSIEHDGQAMFAGLANP 125 (192)
T ss_dssp EEECCCSSCG---GGSTT-HHHHHHHHBTTBCEEEETHHHHHHHHHTSCCCCC----CCSSEEEEEEECCCGGGTTSCSS
T ss_pred EEECCCCcCc---hhCch-HHHHHHHHhcCCCEEEECcChHHHHHHhCCEEEeC-CCcEecceeEEecCCChHHhcCCCC
Confidence 9999999999 44444 3445777778899999 999999999999988765 345566443111 0111111100
Q ss_pred ---------hhhhCCCceEEEeCCCCccccCCCCC----CCccCCCCCc
Q 014848 176 ---------LMRALPPDVIFIADPEGSIMGGGGSI----GPHYSGNDPR 211 (417)
Q Consensus 176 ---------l~~~Lp~~~~f~a~~~G~iMg~~~~~----G~qf~~~~~~ 211 (417)
-+..+|+.+.+++..||.++++.|+. |+||+|+...
T Consensus 126 ~~v~~~H~~~v~~lp~~~~v~a~~~~~~~ai~~~~~~~~gvQfHPE~~~ 174 (192)
T 1i1q_B 126 LPVARYHSLVGSNVPAGLTINAHFNGMVMAVRHDADRVCGFQFHPESIL 174 (192)
T ss_dssp EEEEECCC---CCCCTTCEEEEEETTEEEEEEETTTTEEEESSBTTSTT
T ss_pred cEEEechhhHhhhCCCccEEEECCCCcEEEEEECCCCEEEEEccCcccC
Confidence 12568888988887889999999754 9999997763
No 15
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=98.14 E-value=3.9e-07 Score=92.36 Aligned_cols=106 Identities=9% Similarity=0.042 Sum_probs=77.8
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHhhc-cCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhh
Q 014848 98 AKVCTGPTQTRPLREDEAFKVLDTILRSAKG-DLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPL 175 (417)
Q Consensus 98 ~~v~~gp~~~~Pl~~~~a~~~~~~~l~~~~~-~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~~~ 175 (417)
-.|++++||+.| ++....++. ||++.. .+|++| |+|||.|+.++||.+.|. +|+.++.+.+-. .+. .++.
T Consensus 233 DGliLsGGPgdp---~~~~~~~~~-Ir~~~~~~~PILGIClG~QLLa~A~GG~v~k~-~~gh~g~n~pv~--~~~-~g~v 304 (379)
T 1a9x_B 233 DGIFLSNGPGDP---APCDYAITA-IQKFLETDIPVFGICLGHQLLALASGAKTVKM-KFGHHGGNHPVK--DVE-KNVV 304 (379)
T ss_dssp SEEEECCCSBCS---TTCHHHHHH-HHHHTTSCCCEEEETHHHHHHHHHTTCCEEEE-EEEEEEEEEEEE--ETT-TTEE
T ss_pred CEEEEeCCCCCh---HHHHHHHHH-HHHHHHcCCCEEEECchHHHHHHHhCcEEEec-ccccccCceeeE--ecC-CCcE
Confidence 368899999988 444556666 788775 599999 999999999999999997 888776543210 000 0111
Q ss_pred h---------hh--hCCCceEEEe-C-CCCccccCCCCC----CCccCCCCCc
Q 014848 176 L---------MR--ALPPDVIFIA-D-PEGSIMGGGGSI----GPHYSGNDPR 211 (417)
Q Consensus 176 l---------~~--~Lp~~~~f~a-~-~~G~iMg~~~~~----G~qf~~~~~~ 211 (417)
. ++ .||+.+.+++ + +||.|+|++|+. |+||||+..+
T Consensus 305 ~its~~H~~aV~~~~Lp~~~~v~a~s~~Dg~ieai~~~~~pi~gVQFHPE~~~ 357 (379)
T 1a9x_B 305 MITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGNPEASP 357 (379)
T ss_dssp EEEEEEEEEEECSTTCCTTEEEEEEETTTCCEEEEEESSSSEEEESSCTTCSS
T ss_pred EEEecCccceEecccCCCCeEEEEEeCCCCcEEEEEECCCCEEEEEeCCcCCC
Confidence 1 12 4899988886 4 799999999865 9999997665
No 16
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=97.94 E-value=3.6e-06 Score=75.52 Aligned_cols=107 Identities=11% Similarity=0.055 Sum_probs=72.6
Q ss_pred ceeeCCCCCCCCChhhhhhhHHHHHHHh-hccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHH---HHHHHHhhh
Q 014848 99 KVCTGPTQTRPLREDEAFKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEG---ERRAMNTFW 173 (417)
Q Consensus 99 ~v~~gp~~~~Pl~~~~a~~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~---e~~~~~~~~ 173 (417)
.|+++.++ .| ++.+..++. +|.+ ....|++| |.|+|.++..+|+.+.+. ..+.+|..+.. +...+..+.
T Consensus 46 glil~Gg~-~~---~~~~~~~~~-i~~~~~~~~PilGIC~G~Q~l~~~~gg~v~~~-~~~~~G~~~~~~~~~~~l~~~~~ 119 (189)
T 1wl8_A 46 GIIFSGGP-SL---ENTGNCEKV-LEHYDEFNVPILGICLGHQLIAKFFGGKVGRG-EKAEYSLVEIEIIDEXEIFKGLP 119 (189)
T ss_dssp EEEECCCS-CT---TCCTTHHHH-HHTGGGTCSCEEEETHHHHHHHHHHTCEEEEC-SCCSCEEEEEEESCC--CCTTSC
T ss_pred EEEECCCC-Ch---hhhhhHHHH-HHHHhhCCCeEEEEcHHHHHHHHHhCCceecC-CCcccCceeEEEecCchHHhCCC
Confidence 46666666 55 555666676 6776 67899999 999999999999998875 45555532210 011111111
Q ss_pred hh---------hhhhCCCceEEEe-CCCCccccCCCCC----CCccCCCCCc
Q 014848 174 PL---------LMRALPPDVIFIA-DPEGSIMGGGGSI----GPHYSGNDPR 211 (417)
Q Consensus 174 ~~---------l~~~Lp~~~~f~a-~~~G~iMg~~~~~----G~qf~~~~~~ 211 (417)
.. -+..||+.+.++| +++|.|+++.++. |+||+|+...
T Consensus 120 ~~~~~~~~h~~~v~~l~~~~~vla~s~~g~i~a~~~~~~~~~gvQfHPE~~~ 171 (189)
T 1wl8_A 120 KRLKVWESHMDEVKELPPKFKILARSETCPIEAMKHEELPIYGVQFHPEVAH 171 (189)
T ss_dssp SEEEEEECCSEEEEECCTTEEEEEEESSCSCSEEEESSSCEEEESSCTTSTT
T ss_pred CceEEEEEeeeehhhCCCCcEEEEEcCCCCEEEEEeCCceEEEEecCCCcCC
Confidence 10 0146899999987 8899999999764 9999997653
No 17
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=97.62 E-value=1.5e-05 Score=74.46 Aligned_cols=113 Identities=12% Similarity=-0.010 Sum_probs=74.4
Q ss_pred hccceeeCCCCCCCCC--hhhh----hhhHHHHHHH-hhccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCC----H
Q 014848 96 AQAKVCTGPTQTRPLR--EDEA----FKVLDTILRS-AKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----E 163 (417)
Q Consensus 96 ~~~~v~~gp~~~~Pl~--~~~a----~~~~~~~l~~-~~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s----~ 163 (417)
.=-.|+++++|..|-. ++.. ...++. ||+ .....|++| |+|+|.|+..||+.+.+. ..+++|..+ +
T Consensus 45 ~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~PvLGIClG~QlL~~~~Gg~v~~~-~~~~~G~~~v~~~~ 122 (236)
T 3l7n_A 45 DFDMLILMGGPQSPSSTKKEFPYYDAQAEVKL-IQKAAKSEKIIVGVCLGAQLMGVAYGADYLHS-PKKEIGNYLISLTE 122 (236)
T ss_dssp GCSEEEECCCSSCTTCCTTTCTTCCHHHHHHH-HHHHHHTTCEEEEETHHHHHHHHHTTCCCEEE-EEEEEEEEEEEECT
T ss_pred ccCEEEECCCCCCcccccccCcccchHHHHHH-HHHHHHcCCCEEEEchHHHHHHHHhCCEEecC-CCceeeeEEEEEcc
Confidence 3456899999999832 1111 124555 666 456899999 999999999999998887 445554321 1
Q ss_pred -HHH-HHHHhhhhh--------hhhhCCCceEEEe-CCCCccccCCCCC---CCccCCCCC
Q 014848 164 -GER-RAMNTFWPL--------LMRALPPDVIFIA-DPEGSIMGGGGSI---GPHYSGNDP 210 (417)
Q Consensus 164 -~e~-~~~~~~~~~--------l~~~Lp~~~~f~a-~~~G~iMg~~~~~---G~qf~~~~~ 210 (417)
++. ..+..+... ....+|+.+.+++ +++|.+++++++. |+||+|...
T Consensus 123 ~~~~~~l~~~~~~~~~v~~~H~~~~~lp~~~~vla~s~~~~~~a~~~~~~v~gvQfHPE~~ 183 (236)
T 3l7n_A 123 AGKMDSYLSDFSDDLLVGHWHGDMPGLPDKAQVLAISQGCPRQIIKFGPKQYAFQCHLEFT 183 (236)
T ss_dssp TGGGCGGGTTSCSEEEEEEEEEEECCCCTTCEEEEECSSCSCSEEEEETTEEEESSBSSCC
T ss_pred CcccChHHhcCCCCcEEEEecCCcccCCChheEEEECCCCCEEEEEECCCEEEEEeCCCCC
Confidence 101 111111111 1146888998887 8888899998765 999999765
No 18
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=97.59 E-value=1.4e-05 Score=73.80 Aligned_cols=108 Identities=13% Similarity=0.030 Sum_probs=71.9
Q ss_pred ceeeCCC-CCCCCChhhhhhhHHHHHHHhhccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHH----HHHHHhh
Q 014848 99 KVCTGPT-QTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGE----RRAMNTF 172 (417)
Q Consensus 99 ~v~~gp~-~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~e----~~~~~~~ 172 (417)
.|+++++ ++.+-+++......+.++ ...+|.+| |+|+|.|+.++|+.+.+. ..|.+|..+ -+ ......+
T Consensus 57 glIl~GG~p~~~~~~~~~~~l~~~~~---~~~~PiLGIC~G~Qll~~~lGg~v~~~-~~~~~G~~~-v~~~~~~~l~~~~ 131 (212)
T 2a9v_A 57 GLVLSGGAPNIDEELDKLGSVGKYID---DHNYPILGICVGAQFIALHFGASVVKA-KHPEFGKTK-VSVMHSENIFGGL 131 (212)
T ss_dssp EEEEEEECSCGGGTGGGHHHHHHHHH---HCCSCEEEETHHHHHHHHHTTCEEEEE-EEEEEEEEE-EEESCCCGGGTTC
T ss_pred EEEECCCCCCCCcccccchhHHHHHH---hCCCCEEEEChHHHHHHHHhCCEEEcC-CCcccCcee-eEECCCChhHhcC
Confidence 5777777 677755434455556532 45799999 999999999999999886 444444211 10 0111111
Q ss_pred hhh---------hhhhCCCceEEEe-CCCCccccCCCCC----CCccCCCCCc
Q 014848 173 WPL---------LMRALPPDVIFIA-DPEGSIMGGGGSI----GPHYSGNDPR 211 (417)
Q Consensus 173 ~~~---------l~~~Lp~~~~f~a-~~~G~iMg~~~~~----G~qf~~~~~~ 211 (417)
... -+..+|+.+.++| +++|.|+++.++. |+||+|+...
T Consensus 132 ~~~~~v~~~H~~~v~~l~~~~~vlA~s~d~~i~ai~~~~~~i~gvQfHPE~~~ 184 (212)
T 2a9v_A 132 PSEITVWENHNDEIINLPDDFTLAASSATCQVQGFYHKTRPIYATQFHPEVEH 184 (212)
T ss_dssp CSEEEEEEEEEEEEESCCTTEEEEEECSSCSCSEEEESSSSEEEESSCTTSTT
T ss_pred CCceEEEeEhhhhHhhCCCCcEEEEEeCCCCEEEEEECCCCEEEEEeCCCCCC
Confidence 110 0146899999988 8889999999864 9999997664
No 19
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=97.45 E-value=3.9e-05 Score=72.08 Aligned_cols=112 Identities=13% Similarity=0.004 Sum_probs=73.9
Q ss_pred cceeeCCCCCCCCChhhh---hhhHHHHHHHh-hccCCccc-cccHHHHhHHHHhhhhccccC-CCCCcCCHHHH----H
Q 014848 98 AKVCTGPTQTRPLREDEA---FKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAF-PEATQWSEGER----R 167 (417)
Q Consensus 98 ~~v~~gp~~~~Pl~~~~a---~~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~r~~~~-p~~~~~s~~e~----~ 167 (417)
-.|++++++..+.+++.. ...++. ||++ ....|.+| |+|+|.|+.+||+.+.+. .. ++.| |.+-+. .
T Consensus 59 Dglil~GG~~~~~~~~~~~~l~~~~~~-i~~~~~~~~PiLGIC~G~QlL~~alGG~v~~~-~~g~~~G-~~~v~~~~~~~ 135 (239)
T 1o1y_A 59 SLVVLLGGYMGAYEEEKYPFLKYEFQL-IEEILKKEIPFLGICLGSQMLAKVLGASVYRG-KNGEEIG-WYFVEKVSDNK 135 (239)
T ss_dssp SEEEECCCSCCTTCTTTCTHHHHHHHH-HHHHHHHTCCEEEETHHHHHHHHHTTCCEEEC-TTCCEEE-EEEEEECCCCG
T ss_pred CEEEECCCCccccCCccChhHHHHHHH-HHHHHHCCCCEEEEchhHHHHHHHcCCeEecC-CCCCccc-cEEEEECCCCc
Confidence 457777787777554311 134444 6666 56799999 999999999999999887 44 4333 442210 1
Q ss_pred HHHhhhhh--------hhhhCCCceEEEe-CCCCccccCCCCC--CCccCCCCCcc
Q 014848 168 AMNTFWPL--------LMRALPPDVIFIA-DPEGSIMGGGGSI--GPHYSGNDPRE 212 (417)
Q Consensus 168 ~~~~~~~~--------l~~~Lp~~~~f~a-~~~G~iMg~~~~~--G~qf~~~~~~~ 212 (417)
....+... ..-.+|+.+.++| +++|.++|++++. |+||+|+...+
T Consensus 136 l~~~~~~~~~~~~~H~~~v~lp~~~~vlA~s~~~~iea~~~~~i~gvQfHPE~~~~ 191 (239)
T 1o1y_A 136 FFREFPDRLRVFQWHGDTFDLPRRATRVFTSEKYENQGFVYGKAVGLQFHIEVGAR 191 (239)
T ss_dssp GGTTSCSEEEEEEEESEEECCCTTCEEEEECSSCSCSEEEETTEEEESSBSSCCHH
T ss_pred hHHhCCCCceeEeecCCccccCCCCEEEEEcCCCCEEEEEECCEEEEEeCccCCHH
Confidence 11111110 0025888888887 7888999999886 99999977554
No 20
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=97.15 E-value=4.4e-05 Score=72.88 Aligned_cols=111 Identities=11% Similarity=0.047 Sum_probs=73.3
Q ss_pred cceeeCCCCCCCCChhh-hhhhHHHHHHHh-hccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHH-------HH
Q 014848 98 AKVCTGPTQTRPLREDE-AFKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGE-------RR 167 (417)
Q Consensus 98 ~~v~~gp~~~~Pl~~~~-a~~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~e-------~~ 167 (417)
-.|+++++|..|-++.. -....+. |+++ ....|++| |+|+|.|+.+|||.+.+. ..|+.| |.+-+ ..
T Consensus 50 d~lIl~GGp~~~~d~~~~~~~~~~~-i~~~~~~~~PvlGIC~G~Qll~~~lGG~V~~~-~~~e~G-~~~v~~~~~~~~~~ 126 (250)
T 3m3p_A 50 SGLAMMGGPMSANDDLPWMPTLLAL-IRDAVAQRVPVIGHCLGGQLLAKAMGGEVTDS-PHAEIG-WVRAWPQHVPQALE 126 (250)
T ss_dssp SEEEECCCSSCTTSCCTTHHHHHHH-HHHHHHHTCCEEEETHHHHHHHHHTTCCEEEE-EEEEEE-EEEEEECSSHHHHH
T ss_pred CEEEECCCCCcccccchHHHHHHHH-HHHHHHcCCCEEEECHHHHHHHHHhCCEEEeC-CCCcee-eEEEEEecCCCCcc
Confidence 45778778877643211 1123344 5554 56899999 999999999999999988 445544 32211 11
Q ss_pred HHHhhhhhh-h-------hhCCCceEEEe-CCCCccccCCCCC---CCccCCCCCcc
Q 014848 168 AMNTFWPLL-M-------RALPPDVIFIA-DPEGSIMGGGGSI---GPHYSGNDPRE 212 (417)
Q Consensus 168 ~~~~~~~~l-~-------~~Lp~~~~f~a-~~~G~iMg~~~~~---G~qf~~~~~~~ 212 (417)
.+ .+...+ + =.||+.+.++| +++|.+++++++. |+||+|+...+
T Consensus 127 l~-g~~~~~~v~~~H~~~v~lp~~~~vlA~s~~~~~~a~~~~~~~~GvQfHPE~~~~ 182 (250)
T 3m3p_A 127 WL-GTWDELELFEWHYQTFSIPPGAVHILRSEHCANQAYVLDDLHIGFQCHIEMQAH 182 (250)
T ss_dssp HH-SCSSCEEEEEEEEEEECCCTTEEEEEEETTEEEEEEEETTTEEEESSCTTCCHH
T ss_pred cc-cCCCccEEEEEccceeecCCCCEEEEEeCCCCEEEEEECCeeEEEEeCCcCCHH
Confidence 22 111111 0 15899999998 8889999999866 99999976543
No 21
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=96.96 E-value=0.0013 Score=63.00 Aligned_cols=113 Identities=7% Similarity=-0.035 Sum_probs=70.2
Q ss_pred hhhccceeeCCCCCCCCChhhhhhhHHHHHHHhh-ccCCccc-cccHHHHhHHHHhhhh---ccc--cC------C----
Q 014848 94 LEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTI---RAN--AF------P---- 156 (417)
Q Consensus 94 ~~~~~~v~~gp~~~~Pl~~~~a~~~~~~~l~~~~-~~l~~~~-~~~~~q~gaffga~~~---r~~--~~------p---- 156 (417)
++.--.|++++|++.| ...+ .++. ++++. ..+|.+| |+|+|.|..+||+.+. .++ .| |
T Consensus 65 ~~~~dgiil~GG~~~~---~~~~-~~~~-i~~~~~~~~PilGIC~G~Qll~~a~Gg~v~~~~~~~s~E~~~~~~~~~l~~ 139 (273)
T 2w7t_A 65 LLGCDGIFVPGGFGNR---GVDG-KCAA-AQVARMNNIPYFGVXLGMQVAVIELSRNVVGWSDANSEEFNKESTHQVVRI 139 (273)
T ss_dssp HHTCSEEEECCCCTTT---THHH-HHHH-HHHHHHHTCCEEEETHHHHHHHHHHHHHTTCCTTCEETTTCTTCSCEEEEC
T ss_pred HhhCCEEEecCCCCCc---Cchh-HHHH-HHHHHHCCCcEEEECcCHHHHHHHHhCccccccCCchhhcccccCCCceee
Confidence 3333457777787765 3333 4455 67764 6799999 9999999999999986 232 12 1
Q ss_pred -CCCc----------CCHH-----HHHHHHhhh----------------hhhhhhC-CCceEEEe-CCC----C-ccccC
Q 014848 157 -EATQ----------WSEG-----ERRAMNTFW----------------PLLMRAL-PPDVIFIA-DPE----G-SIMGG 197 (417)
Q Consensus 157 -~~~~----------~s~~-----e~~~~~~~~----------------~~l~~~L-p~~~~f~a-~~~----G-~iMg~ 197 (417)
.|++ |.+- ...+...++ |..++.| |+.+.++| ++| | .||++
T Consensus 140 ~~~~~~~~~~~~~~g~~~v~~~~~~s~l~~~~~~~~~v~~~H~Hsy~v~~~~v~~l~~~g~~v~A~s~d~~~~g~~ieai 219 (273)
T 2w7t_A 140 MDCDRNKMGANMHLGACDVYIVEKSSIMAKIYSKSNIVVERHRHRYEVNTAYFEDLRKAGLCISAVTDPTFSSRCRVEAV 219 (273)
T ss_dssp CGGGBCSSCBCCEEEEEEEEECCTTSHHHHHTTTCSEEEEEEEECCEECGGGHHHHHHTTCEEEEESCTTCCTTCCEEEE
T ss_pred ccccccccCCcccccceEEEEecCCcHHHHHhCCCceEEeecccccccCHHHHHhhccCCcEEEEEcCCcCCCCCeEEEE
Confidence 1221 1110 111111111 1222356 78899987 788 7 79999
Q ss_pred CCCC-----CCccCCCCCc
Q 014848 198 GGSI-----GPHYSGNDPR 211 (417)
Q Consensus 198 ~~~~-----G~qf~~~~~~ 211 (417)
.|+. |+||+|+...
T Consensus 220 e~~~~p~~~GvQfHPE~~~ 238 (273)
T 2w7t_A 220 ENPSLRFFLAVQFHPEFIS 238 (273)
T ss_dssp ECTTSSSEEEESSCGGGSC
T ss_pred EcCCCCeEEEEeCCCCcCC
Confidence 9873 9999996553
No 22
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=96.94 E-value=0.00013 Score=77.01 Aligned_cols=123 Identities=5% Similarity=-0.044 Sum_probs=78.7
Q ss_pred ceeeCCCCCCCCChhhhhhhHHHHHHHhh-ccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCC----HHHH------
Q 014848 99 KVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWS----EGER------ 166 (417)
Q Consensus 99 ~v~~gp~~~~Pl~~~~a~~~~~~~l~~~~-~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s----~~e~------ 166 (417)
.|+++.|++.+-.++ +..+.+.+++.+. ..+|.+| |+|+|.|...||+.+.++ .-.++|..+ ++..
T Consensus 53 gIIlsGGp~s~~~~~-~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~lGG~V~~~-~~~E~G~~~l~~~~~~~~~~~p~ 130 (556)
T 3uow_A 53 GVILSGGPYSVTEAG-SPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKS-KTSEYGCTDVNILRNDNINNITY 130 (556)
T ss_dssp EEEECCCSCCTTSTT-CCCCCHHHHHHHHHTTCCEEEETHHHHHHHHHTTCEEEEE-EEEEEEEEEEEECCTTGGGGCSG
T ss_pred EEEECCCCCcccccC-CcchhHHHHHHhhhcCCCEEEECHHHHHHHHHhCCcEecC-CCcccCCcceeeccCcccccccc
Confidence 466666888886543 3344455566554 3799999 999999999999999886 223333211 1110
Q ss_pred ------------------------HHHHhhhhhh----------hhhCCCceEEEe-CCCCccccCCCCC----CCccCC
Q 014848 167 ------------------------RAMNTFWPLL----------MRALPPDVIFIA-DPEGSIMGGGGSI----GPHYSG 207 (417)
Q Consensus 167 ------------------------~~~~~~~~~l----------~~~Lp~~~~f~a-~~~G~iMg~~~~~----G~qf~~ 207 (417)
..+..++|.- +..+|+.+.++| +++|.|+|+.++. |+||||
T Consensus 131 v~~~~~~~~~mg~~~n~~~~~~~~~Lf~gl~~~~~~v~~~H~d~V~~lp~g~~vlA~s~~~~i~ai~~~~~~i~GvQFHP 210 (556)
T 3uow_A 131 CRNFGDSSSAMDLYSNYKLMNETCCLFENIKSDITTVWMNHNDEVTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHP 210 (556)
T ss_dssp GGGC---CCHHHHHTTSCCCC--CGGGTTCCSSEEEEEEEEEEEEEECCTTCEEEEEETTEEEEEEEETTTTEEEESSCT
T ss_pred eecccccccccccccccccccccchhhcccccCceEEEEEccceeeccCCCcEEEEEeCCCCEEEEEECCCCEEEEEcCC
Confidence 1111111110 146888999998 8899999998844 999999
Q ss_pred CCCccCcHHHHHHHHh
Q 014848 208 NDPREMRLVGALREVL 223 (417)
Q Consensus 208 ~~~~~m~l~~iIkkl~ 223 (417)
+......=..+++...
T Consensus 211 E~~~~~~G~~ll~nFl 226 (556)
T 3uow_A 211 EVYESLDGELMFYNFA 226 (556)
T ss_dssp TSTTSTTHHHHHHHHH
T ss_pred CCCccccchHHHHHHH
Confidence 7765544444555543
No 23
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=96.89 E-value=0.00024 Score=77.05 Aligned_cols=158 Identities=9% Similarity=0.014 Sum_probs=86.0
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHhhccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHH----HHHHhh
Q 014848 98 AKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGER----RAMNTF 172 (417)
Q Consensus 98 ~~v~~gp~~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~----~~~~~~ 172 (417)
-.|++++||+.+.++ ++..+.+.+ +...+|++| |+|+|.|...||+.+.+. ..+++| |.+-+- .++..+
T Consensus 74 dGIILsGGp~s~~~~-~~~~~~~~i---~~~g~PvLGIC~G~QlLa~~lGG~v~~~-~~~e~G-~~~v~~~~~~~Lf~~l 147 (697)
T 2vxo_A 74 RAIIISGGPNSVYAE-DAPWFDPAI---FTIGKPVLGICYGMQMMNKVFGGTVHKK-SVREDG-VFNISVDNTCSLFRGL 147 (697)
T ss_dssp SEEEEEECC--------CCCCCGGG---TTSSCCEEEEEHHHHHHHHHTTCCBCC---------CEEEEECTTSGGGTTC
T ss_pred CEEEECCCCCcccCc-cchhHHHHH---HhCCCCEEEECHHHHHHHHHhCCeEeec-CCCccc-eEEEEecCCChhhhcC
Confidence 358888888887543 344444442 235699999 999999999999999987 566666 332110 011111
Q ss_pred hhh---------hhhhCCCceEEEeCCCCccccCCCCC----CCccCCCCCccCcHHHHHHHHh-----cCCCCCHHH--
Q 014848 173 WPL---------LMRALPPDVIFIADPEGSIMGGGGSI----GPHYSGNDPREMRLVGALREVL-----AGGHLGYEE-- 232 (417)
Q Consensus 173 ~~~---------l~~~Lp~~~~f~a~~~G~iMg~~~~~----G~qf~~~~~~~m~l~~iIkkl~-----~G~~LT~eE-- 232 (417)
... -+..+|+.+.++|..++.|+|+.|.. |+||+|+......=..+++... ...+.+.++
T Consensus 148 ~~~~~v~~~H~~~V~~lp~g~~vlA~s~~~i~ai~~~~~~i~GvQFHPE~~~t~~g~~ll~nFl~~i~~~~~~~~~~~~~ 227 (697)
T 2vxo_A 148 QKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRE 227 (697)
T ss_dssp CSEEEECCCSSCCBSSCCTTCEEEEEETTEEEEEEETTTTEEEESSCTTSSSSTTHHHHHHHHHTTTTCCCSCCCHHHHH
T ss_pred CccCcceeecccceecCCCCeEEEEEeCCceEEEEeCCCCEEEEEecccCCCCccchhhhhhhhhccccccccchhhHHH
Confidence 000 01468899999985567999999765 9999998765433455566554 234666433
Q ss_pred --HHHHHHHhcCCcc--CCCCCCCCHHHHHHHH
Q 014848 233 --VQGVLRDVLPLQV--DNKAPGVSESLLSAFL 261 (417)
Q Consensus 233 --A~~~m~~IL~~~~--~~~~Gevsd~QigAFL 261 (417)
..+.++..+.-+. -.-+|.++-.-+++++
T Consensus 228 ~~~i~~Ir~~v~~~~vvv~lSGGvDSsVla~Ll 260 (697)
T 2vxo_A 228 LECIREIKERVGTSKVLVLLSGGVDSTVCTALL 260 (697)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccceEEEccCchHHHHHHHHH
Confidence 2233333320000 1226777766555554
No 24
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=96.79 E-value=0.0009 Score=70.81 Aligned_cols=50 Identities=6% Similarity=-0.113 Sum_probs=39.0
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHhh-ccCCccc-cccHHHHhHHHHhhhhcc
Q 014848 98 AKVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRA 152 (417)
Q Consensus 98 ~~v~~gp~~~~Pl~~~~a~~~~~~~l~~~~-~~l~~~~-~~~~~q~gaffga~~~r~ 152 (417)
-.|++++|++.| ...+ .++. +++++ ..+|.+| |+|+|.+...||+.+.+.
T Consensus 345 DGIilsGGpg~~---~~~g-~~~~-i~~a~~~~~PiLGIClG~Qll~va~Gg~v~~l 396 (545)
T 1s1m_A 345 DAILVPGGFGYR---GVEG-MITT-ARFARENNIPYLGICLGMQVALIDYARHVANM 396 (545)
T ss_dssp SEEEECCCCSST---THHH-HHHH-HHHHHHTTCCEEEETHHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCc---cchh-hHHH-HHHHHHCCCcEEEECChHHHHHHHhCCceecC
Confidence 457888898888 3333 2355 77776 5799999 999999999999999853
No 25
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=96.78 E-value=0.00027 Score=73.88 Aligned_cols=120 Identities=9% Similarity=0.004 Sum_probs=76.0
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHhhccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHH----HHHHhh
Q 014848 98 AKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGER----RAMNTF 172 (417)
Q Consensus 98 ~~v~~gp~~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~----~~~~~~ 172 (417)
-.|+++++|+.+.+++ +-.+.+.+ +...+|++| |.|+|.|...+|+.+.+. ..+++|..+ -+. ..+..+
T Consensus 52 dgiILsGGp~s~~~~~-~~~~~~~~---~~~g~PvLGIC~G~Qlla~~~GG~V~~~-~~~e~G~~~-v~~~~~~~L~~~l 125 (525)
T 1gpm_A 52 SGIILSGGPESTTEEN-SPRAPQYV---FEAGVPVFGVCYGMQTMAMQLGGHVEAS-NEREFGYAQ-VEVVNDSALVRGI 125 (525)
T ss_dssp SEEEECCCSSCTTSTT-CCCCCGGG---GTSSSCEEEETHHHHHHHHHHTCEEECC-SSCEEEEEE-EEECSCCTTTTTC
T ss_pred CEEEECCcCccccccC-CcchHHHH---HHCCCCEEEEChHHHHHHHHcCCEEEeC-CCcccceEE-EEeCCCCHhhccC
Confidence 3577777887775543 22222221 234799999 999999999999999887 334444221 100 011111
Q ss_pred hh--------h---------hhhhCCCceEEEe-CCCCccccCCCCC----CCccCCCCCccCcHHHHHHHHh
Q 014848 173 WP--------L---------LMRALPPDVIFIA-DPEGSIMGGGGSI----GPHYSGNDPREMRLVGALREVL 223 (417)
Q Consensus 173 ~~--------~---------l~~~Lp~~~~f~a-~~~G~iMg~~~~~----G~qf~~~~~~~m~l~~iIkkl~ 223 (417)
.. . -+..||+.+.++| +++|.|+|+.|+. |+||||+......-..+++...
T Consensus 126 ~~~~~~~~~~~~~v~~~H~~~V~~lp~g~~v~A~s~~~~i~ai~~~~~~i~gvQFHPE~~~~~~g~~ll~nF~ 198 (525)
T 1gpm_A 126 EDALTADGKPLLDVWMSHGDKVTAIPSDFITVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFV 198 (525)
T ss_dssp CSEECTTSCEEEEEEEEECSEEEECCTTCEEEEECSSCSCSEEEETTTTEEEESBCTTSTTSTTHHHHHHHHH
T ss_pred ccccccccccceEEEEEccceeeeCCCCCEEEEECCCCCEEEEEECCCCEEEEecCCCCCcchhHHHHHHHHH
Confidence 11 0 1146899999998 8899999999854 9999997765433344555443
No 26
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=96.72 E-value=0.00029 Score=73.21 Aligned_cols=158 Identities=15% Similarity=0.028 Sum_probs=89.1
Q ss_pred ceeeCCCCCCCCChhhhhhhHHHHHHHhhccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHH---HHHHhhhh
Q 014848 99 KVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGER---RAMNTFWP 174 (417)
Q Consensus 99 ~v~~gp~~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~---~~~~~~~~ 174 (417)
.|+++.+|..+.+++ +..+.+.+ +...+|++| |.|+|.|...+|+.+.+. ..+++|..+ -+. ..++.+..
T Consensus 45 giIlsGGp~s~~~~~-~~~~~~~~---~~~~~PvLGIC~G~Qlla~~~GG~v~~~-~~~e~G~~~-v~~~~~~l~~~~~~ 118 (503)
T 2ywb_A 45 ALILSGGPRSVFDPD-APRPDPRL---FSSGLPLLGICYGMQLLAQELGGRVERA-GRAEYGKAL-LTRHEGPLFRGLEG 118 (503)
T ss_dssp EEEECCCSSCSSCTT-CCCCCGGG---GCSSCCEEEETHHHHHHHHTTTCEEECC----CEEEEE-CSEECSGGGTTCCS
T ss_pred EEEECCCCchhccCC-CcchHHHH---HhCCCCEEEECHHHHHHHHHhCCeEeeC-CCCccceEE-EEecCcHHhhcCCC
Confidence 567777777765543 22222221 234799999 999999999999999887 334444221 111 01111100
Q ss_pred h---------hhhhCCCceEEEe-CCCCccccCCCCC----CCccCCCCCccCc----HHHHHHHHhcCCCCCHH----H
Q 014848 175 L---------LMRALPPDVIFIA-DPEGSIMGGGGSI----GPHYSGNDPREMR----LVGALREVLAGGHLGYE----E 232 (417)
Q Consensus 175 ~---------l~~~Lp~~~~f~a-~~~G~iMg~~~~~----G~qf~~~~~~~m~----l~~iIkkl~~G~~LT~e----E 232 (417)
. -+..+|+.+.++| ++++.|+++.|+. |+||||+...... +..+++.....++.+.+ +
T Consensus 119 ~~~v~~~H~~~v~~lp~g~~v~A~s~~~~i~ai~~~~~~~~gvQFHPE~~~~~~g~~ll~~F~~~~~~~~~~~~~~~~~~ 198 (503)
T 2ywb_A 119 EVQVWMSHQDAVTAPPPGWRVVAETEENPVAAIASPDGRAYGVQFHPEVAHTPKGMQILENFLELAGVKRDWTPEHVLEE 198 (503)
T ss_dssp CCEEEEECSCEEEECCTTCEEEEECSSCSCSEEECTTSSEEEESBCTTSTTSTTHHHHHHHHHHHTTCCCCCCHHHHHHH
T ss_pred ccEEEEECCCccccCCCCCEEEEEECCCCEEEEEeCCCCEEEEecCCCcccccccHHHHHHHHHHhhhhccccchhhhHH
Confidence 0 0146899999998 8899999998855 9999997665422 34444333334566643 2
Q ss_pred HHHHHHHhcCCcc--CCCCCCCCHHHHHHHHH
Q 014848 233 VQGVLRDVLPLQV--DNKAPGVSESLLSAFLI 262 (417)
Q Consensus 233 A~~~m~~IL~~~~--~~~~Gevsd~QigAFL~ 262 (417)
..+.++..+.-+. -.-+|.++..-++.+|.
T Consensus 199 ~i~~ir~~~~~~kvvvalSGGvDSsvla~ll~ 230 (503)
T 2ywb_A 199 LLREVRERAGKDRVLLAVSGGVDSSTLALLLA 230 (503)
T ss_dssp HHHHHHHHHTTSEEEEEECSSHHHHHHHHHHH
T ss_pred HHHhhhhhccCccEEEEecCCcchHHHHHHHH
Confidence 3333333320000 11267777655555443
No 27
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=96.69 E-value=0.0011 Score=64.04 Aligned_cols=108 Identities=12% Similarity=0.063 Sum_probs=69.8
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHh-hccCCccc-cccHHHHhHHHHhhhh---cccc--CC------------CC
Q 014848 98 AKVCTGPTQTRPLREDEAFKVLDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTI---RANA--FP------------EA 158 (417)
Q Consensus 98 ~~v~~gp~~~~Pl~~~~a~~~~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~---r~~~--~p------------~~ 158 (417)
-.|+++++++.+ ... ..++. ++++ ...+|++| |+|+|.|+.+||+.+. +++. |. .|
T Consensus 92 dgiil~GG~~~~---~~~-~~~~~-i~~~~~~~~PilGIC~G~Q~l~~a~Gg~v~~~~~~~~~e~~~~~~~~~i~~~~~h 166 (289)
T 2v4u_A 92 DGILVPGGFGIR---GTL-GKLQA-ISWARTKKIPFLGVXLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEH 166 (289)
T ss_dssp SEEEECSCCSST---THH-HHHHH-HHHHHHTTCCEEEETHHHHHHHHHHHHHHSCCTTEEESTTCTTCSEEEEEECCBC
T ss_pred CEEEecCCCCch---hHH-HHHHH-HHHHHHcCCcEEEECccHHHHHHHHhccccccccCcccccCccccccceecchhh
Confidence 456676666554 222 24555 6766 45799999 9999999999999986 3321 31 23
Q ss_pred Cc----------CC------HHHHHHHHhhhh----------------hhhhhCC-CceEEEe-CCCCc-cccCCCCC--
Q 014848 159 TQ----------WS------EGERRAMNTFWP----------------LLMRALP-PDVIFIA-DPEGS-IMGGGGSI-- 201 (417)
Q Consensus 159 ~~----------~s------~~e~~~~~~~~~----------------~l~~~Lp-~~~~f~a-~~~G~-iMg~~~~~-- 201 (417)
.+ |. ++ -.+...++. ..+..|| +.+.+++ ++||. ||++.++.
T Consensus 167 ~~~~~~~~~~~g~~~v~~~~~~-s~l~~~~~~~~~v~~~H~H~y~vn~~~v~~l~~~g~~v~A~s~dg~~ieaie~~~~p 245 (289)
T 2v4u_A 167 NPGNLGGTMRLGIRRTVFKTEN-SILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHP 245 (289)
T ss_dssp CTTCSSCBCEEEEEEEEESCSC-CHHHHHTTSCSEEEEEEEECEEECGGGSGGGTTSSEEEEEEETTSCSEEEEEESSSS
T ss_pred cccccCCccccceEEEEEecCC-CHHHHhcCCCceEEEecccccccCHHHHHhcccCCeEEEEEcCCCCeEEEEEcCCCC
Confidence 22 01 11 111111221 3345788 8999998 88998 99999874
Q ss_pred ---CCccCCCCCc
Q 014848 202 ---GPHYSGNDPR 211 (417)
Q Consensus 202 ---G~qf~~~~~~ 211 (417)
|+||+|+...
T Consensus 246 ~~lGvQfHPE~~~ 258 (289)
T 2v4u_A 246 YFVGVQFHPEFSS 258 (289)
T ss_dssp CEEEESSBGGGGC
T ss_pred eEEEEECCCCCCC
Confidence 9999987654
No 28
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=96.55 E-value=0.00029 Score=65.40 Aligned_cols=117 Identities=9% Similarity=-0.037 Sum_probs=66.1
Q ss_pred ceeeCCCCCCCCChhhhhhhHHHHHHHhhccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHHH----HHHHhhh
Q 014848 99 KVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGER----RAMNTFW 173 (417)
Q Consensus 99 ~v~~gp~~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~----~~~~~~~ 173 (417)
.|+++.++..+.+++ +....+.++ ....|++| |+|+|.|+.+||+.+.|. ..+++| |.+-+. .+.+.+.
T Consensus 70 glil~Gg~~~~~~~~-~~~~~~~~~---~~~~PilGIC~G~Qll~~~~GG~v~~~-~~~~~G-~~~v~~~~~~~l~~~l~ 143 (218)
T 2vpi_A 70 AIIISGGPNSVYAED-APWFDPAIF---TIGKPVLGICYGMQMMNKVFGGTVHKK-SVREDG-VFNISVDNTCSLFRGLQ 143 (218)
T ss_dssp EEEEEC----------CCCCCGGGG---TSSCCEEEETHHHHHHHHHTTCCEEEE-EECSCE-EEEEEECTTSGGGTTCC
T ss_pred EEEECCCCccccccc-chhHHHHHH---HcCCCEEEEcHHHHHHHHHhCCceEeC-CCCccc-EEEEEEccCChhHhcCC
Confidence 477777777664322 222222212 34699999 999999999999999886 555544 321111 1111111
Q ss_pred hh---------hhhhCCCceEEEeCCCCccccCCCCC----CCccCCCCCccCcHHHHHHH
Q 014848 174 PL---------LMRALPPDVIFIADPEGSIMGGGGSI----GPHYSGNDPREMRLVGALRE 221 (417)
Q Consensus 174 ~~---------l~~~Lp~~~~f~a~~~G~iMg~~~~~----G~qf~~~~~~~m~l~~iIkk 221 (417)
.. -+..+|+.+.++|..+|.|+++.++. |+||+|+......-..+++.
T Consensus 144 ~~~~v~~~H~~~v~~l~~~~~vlA~s~~~i~ai~~~~~~i~gvQfHPE~~~~~~g~~l~~~ 204 (218)
T 2vpi_A 144 KEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANESKKLYGAQFHPEVGLTENGKVILKN 204 (218)
T ss_dssp SEEEEEECSEEEESSCCTTCEEEEEETTEEEEEEETTTTEEEESSCTTSTTSTTHHHHHHH
T ss_pred CCcEEeehhhhHhhhcCCCCEEEEEcCCeEEEEEECCCCEEEEEcCCCCCCChhHHHHHHH
Confidence 10 01468888988884478999998644 99999977653222334443
No 29
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=96.31 E-value=0.00029 Score=73.71 Aligned_cols=120 Identities=9% Similarity=-0.025 Sum_probs=69.5
Q ss_pred cceeeCCCCCCCCChhhhhhhHHHHHHHhhccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCH---HHHHHHHhhh
Q 014848 98 AKVCTGPTQTRPLREDEAFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSE---GERRAMNTFW 173 (417)
Q Consensus 98 ~~v~~gp~~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~---~e~~~~~~~~ 173 (417)
-.|+++.+|..+-+ +.+..+.+.+ +...+|++| |+|+|.|...||+.+.+. ..++.|..+- .+...+..++
T Consensus 55 dgIILsGGp~sv~~-~~~~~~~~~~---~~~~~PvLGIC~G~Qlla~~lGG~V~~~-~~~e~G~~~v~~~~~~~l~~~l~ 129 (527)
T 3tqi_A 55 HGIILSGGPETVTL-SHTLRAPAFI---FEIGCPVLGICYGMQTMAYQLGGKVNRT-AKAEFGHAQLRVLNPAFLFDGIE 129 (527)
T ss_dssp SEEEECCCCC----------CCCST---TTSSSCEEEETHHHHHHHHHSSSCBC------CEEEEEEEESSCTTTTSSCC
T ss_pred CEEEECCcCccccc-CCChhhHHHH---HhcCCCEEEEChHHHHHHHHcCCeEEeC-CCccccceEEEEcCCChhhcCCc
Confidence 35788888887743 2333333321 345799999 999999999999999887 4445443210 0001111111
Q ss_pred h---------h--------hhhhCCCceEEEe-CCCCccccCCCCC----CCccCCCCCccCcHHHHHHHH
Q 014848 174 P---------L--------LMRALPPDVIFIA-DPEGSIMGGGGSI----GPHYSGNDPREMRLVGALREV 222 (417)
Q Consensus 174 ~---------~--------l~~~Lp~~~~f~a-~~~G~iMg~~~~~----G~qf~~~~~~~m~l~~iIkkl 222 (417)
. . -+..||+.+.++| ++++.|+++.|+. |+||||+......=.++++..
T Consensus 130 ~~~~~~~~~~~~v~~~H~d~v~~lp~g~~v~A~s~~~~i~ai~~~~~~~~GvQFHPE~~~t~~G~~ll~nF 200 (527)
T 3tqi_A 130 DQVSPQGEPLLDVWMSHGDIVSELPPGFEATACTDNSPLAAMADFKRRFFGLQFHPEVTHTPQGHRILAHF 200 (527)
T ss_dssp SBCCTTSCCEEEEEEESSSCBCSCCTTCEEEEEETTEEEEEEECSSSCEEEESBCSSSTTSTTHHHHHHHH
T ss_pred cccccccccceEEEEEcccchhccCCCCEEEEEeCCCcEEEEEcCCCCEEEEEeccccccccccchhhhhh
Confidence 1 0 1257899999998 8889999998754 999999776543334445443
No 30
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=96.27 E-value=0.0018 Score=68.64 Aligned_cols=54 Identities=6% Similarity=-0.147 Sum_probs=41.8
Q ss_pred hhhccceeeCCCCCCCCChhhhhhhHHHHHHHhh-ccCCccc-cccHHHHhHHHHhhhhcc
Q 014848 94 LEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRA 152 (417)
Q Consensus 94 ~~~~~~v~~gp~~~~Pl~~~~a~~~~~~~l~~~~-~~l~~~~-~~~~~q~gaffga~~~r~ 152 (417)
|+.--.|++++|++.| ...++ +++ +++++ ..+|.+| |+|+|.+...||+.+.+.
T Consensus 353 L~~~DGIILpGGfGd~---~~~g~-i~~-ir~a~e~~iPiLGICLGmQlL~~a~Gg~v~~l 408 (550)
T 1vco_A 353 FRDVSGILVPGGFGVR---GIEGK-VRA-AQYARERKIPYLGICLGLQIAVIEFARNVAGL 408 (550)
T ss_dssp TTTCSCEEECCCCSST---THHHH-HHH-HHHHHHTTCCEEEETHHHHHHHHHHHHHTSCC
T ss_pred HhcCCEEEECCCCCCc---chhhh-HHH-HHHHHHCCCcEEEECcCHHHHHHHhCcccccC
Confidence 4333468888898888 34444 455 78886 6899999 999999999999998864
No 31
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=96.06 E-value=0.0004 Score=68.08 Aligned_cols=115 Identities=12% Similarity=0.040 Sum_probs=66.8
Q ss_pred hhhccceeeCCCCCCCCCh---hhhhhhHHHHHHHh-hc-cCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHH---
Q 014848 94 LEAQAKVCTGPTQTRPLRE---DEAFKVLDTILRSA-KG-DLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEG--- 164 (417)
Q Consensus 94 ~~~~~~v~~gp~~~~Pl~~---~~a~~~~~~~l~~~-~~-~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~--- 164 (417)
++.=-.|++..+++.+=+. +.....++.+++.. .| .+|++| |+|+|.|..++|+.+.+. .++.++++.+-
T Consensus 84 l~~~dglil~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~~~~~-~~~~~g~~~p~~~~ 162 (315)
T 1l9x_A 84 FKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLT-ATDTVDVAMPLNFT 162 (315)
T ss_dssp HHHSSEEEECCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCCCE-EEEEEEEEECCEEC
T ss_pred HhcCCEEEEeCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCccccc-cccccCCCCCeeec
Confidence 3333467776666554111 12234566644333 23 599999 999999999999987665 45544431100
Q ss_pred ----HHHHHHhhhhh-----------------hhh--------hCCCceEEEe-CCCCc---cccCCCCC----CCccCC
Q 014848 165 ----ERRAMNTFWPL-----------------LMR--------ALPPDVIFIA-DPEGS---IMGGGGSI----GPHYSG 207 (417)
Q Consensus 165 ----e~~~~~~~~~~-----------------l~~--------~Lp~~~~f~a-~~~G~---iMg~~~~~----G~qf~~ 207 (417)
.-.+...+... -++ .||+.+.++| ++||. ||++.|+. |+||+|
T Consensus 163 ~~~~~s~L~~~~~~~~~~~l~~~~~~~~~H~~~V~~~~~~~~~~l~~g~~v~A~s~dg~ve~i~~i~~~~~~i~GVQfHP 242 (315)
T 1l9x_A 163 GGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHP 242 (315)
T ss_dssp STTTTCSTTTTSCHHHHHHHHHSCCEEEEEEEECBHHHHHTCHHHHHHEEEEEEEESSSCEEEEEEEESSSCEEEESSCT
T ss_pred cCCCCChHHHhcChhhhhhccccceEEEhhhhhcCccccccccccCCCCEEEEEcCCCCEEEEEEeccCCCCEEEEEeCC
Confidence 00011111000 012 5777888887 78887 57767753 999999
Q ss_pred CC
Q 014848 208 ND 209 (417)
Q Consensus 208 ~~ 209 (417)
+.
T Consensus 243 E~ 244 (315)
T 1l9x_A 243 EK 244 (315)
T ss_dssp TH
T ss_pred CC
Confidence 64
No 32
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=95.92 E-value=0.0034 Score=59.22 Aligned_cols=93 Identities=11% Similarity=0.002 Sum_probs=61.2
Q ss_pred hHHHHHHHhh-ccCCccc-cccHHHHhHHHHhhhhccc-----cCCCCCc-------CCHHHH----HHHHhhhhhh---
Q 014848 118 VLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIRAN-----AFPEATQ-------WSEGER----RAMNTFWPLL--- 176 (417)
Q Consensus 118 ~~~~~l~~~~-~~l~~~~-~~~~~q~gaffga~~~r~~-----~~p~~~~-------~s~~e~----~~~~~~~~~l--- 176 (417)
.++. ||++. ..+|++| |+|+|.|.-.||+.+.+.- ..+.|.+ |.+-+. .+...++..+
T Consensus 97 ~~~l-ir~a~~~~~PiLGIC~G~Qll~~a~Gg~v~~~~~~~~~~~~~h~~~~~~~~g~~~v~~~~~s~l~~~~~~~~~v~ 175 (254)
T 3fij_A 97 EIAL-VRAALDAGKPIFAICRGMQLVNVALGGTLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPNKKLVN 175 (254)
T ss_dssp HHHH-HHHHHHTTCCEEEETHHHHHHHHHTTCCEESSGGGSSSCCCCCBCCSCTTSCCEEEEECTTSSGGGTCCTTEEEC
T ss_pred HHHH-HHHHHHcCCCEEEECHHHHHHHHHhCCceecccccccCccccccCCCCCccceEEEEeCCCChHHHhcCCcEEEE
Confidence 3455 67764 5899999 9999999999999987641 1122221 221110 0111111111
Q ss_pred ------hhhCCCceEEEe-CCCCccccCCCC-C-----CCccCCCCCc
Q 014848 177 ------MRALPPDVIFIA-DPEGSIMGGGGS-I-----GPHYSGNDPR 211 (417)
Q Consensus 177 ------~~~Lp~~~~f~a-~~~G~iMg~~~~-~-----G~qf~~~~~~ 211 (417)
++.||+.+.++| ++||.|+|+.++ . |+||+|+...
T Consensus 176 ~~H~~~v~~l~~g~~v~a~s~dg~ieai~~~~~~~~~~gvQfHPE~~~ 223 (254)
T 3fij_A 176 SLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMF 223 (254)
T ss_dssp CBCSCEESSCCSSEEEEEEETTCCEEEEEESSCSSCEEEESSCGGGTG
T ss_pred EeccchhhccCCCcEEEEEeCCCcEEEEEecCCCCeEEEEEcCCccCC
Confidence 146899999998 889999999988 3 8999997665
No 33
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=95.91 E-value=0.00023 Score=64.49 Aligned_cols=55 Identities=22% Similarity=0.152 Sum_probs=35.4
Q ss_pred hhhhccceeeCCCCCCCCChhhhhhhHHH---HHHHhhccCCccc-cccHHHHhHHHHhhhhcc
Q 014848 93 LLEAQAKVCTGPTQTRPLREDEAFKVLDT---ILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRA 152 (417)
Q Consensus 93 ~~~~~~~v~~gp~~~~Pl~~~~a~~~~~~---~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~ 152 (417)
+.++. .|++ ||++.| .++...++. |-.-.....|++| |+|+|.|...+|+.+.++
T Consensus 38 l~~~D-~lil-PG~g~~---~~~~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~~g~~~~~~ 96 (211)
T 4gud_A 38 VLAAD-KLFL-PGVGTA---SEAMKNLTERDLIELVKRVEKPLLGICLGMQLLGKLSEEKGQKA 96 (211)
T ss_dssp HHHCS-EEEE-CCCSCH---HHHHHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSEECCC----
T ss_pred HhCCC-EEEE-CCCCCH---HHHHHHHHhcChHHHHHHcCCCEEEEchhHhHHHHHhCCccccc
Confidence 33443 3555 888887 777666543 2222345789999 999999999998877664
No 34
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=94.82 E-value=0.013 Score=62.03 Aligned_cols=111 Identities=11% Similarity=-0.016 Sum_probs=70.2
Q ss_pred hhhccceeeCCCCCCCCChhhhhhhHHHHHHHhh-ccCCccc-cccHHHHhHHHHhhhhc---cc--cCCC---------
Q 014848 94 LEAQAKVCTGPTQTRPLREDEAFKVLDTILRSAK-GDLKDEE-EVSKAQLGAFFSAMTIR---AN--AFPE--------- 157 (417)
Q Consensus 94 ~~~~~~v~~gp~~~~Pl~~~~a~~~~~~~l~~~~-~~l~~~~-~~~~~q~gaffga~~~r---~~--~~p~--------- 157 (417)
|+.--.|++.++++.| ...+ .++. +|.++ ..+|.+| |+|+|.+...||+.+.+ +| .|-.
T Consensus 348 L~~~DgIIlpGG~G~~---~~~g-~i~~-ir~a~~~~~PiLGIClG~Qll~va~Gg~v~g~qda~s~Ef~~~~~~pvI~~ 422 (535)
T 3nva_A 348 LGNVNGIIVLPGFGSR---GAEG-KIKA-IKYAREHNIPFLGICFGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITL 422 (535)
T ss_dssp TTSCSEEEECCCCSST---THHH-HHHH-HHHHHHHTCCEEEETHHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEEC
T ss_pred ccCCCEEEECCCCCCc---cHHH-HHHH-HHHHHHcCCcEEEECcchhHHHHHhhccccCccCCcccccCCCCCCCeeec
Confidence 3333456676787776 3333 3566 67775 5899999 99999999999999953 22 1321
Q ss_pred -CCcCC------------------HHHHHHHHhhhhh---------------hhhhC-CCceEEEe-CCCCccccCCCCC
Q 014848 158 -ATQWS------------------EGERRAMNTFWPL---------------LMRAL-PPDVIFIA-DPEGSIMGGGGSI 201 (417)
Q Consensus 158 -~~~~s------------------~~e~~~~~~~~~~---------------l~~~L-p~~~~f~a-~~~G~iMg~~~~~ 201 (417)
+.|.. ++ -++-..+|.. ..+.+ ++.+.|++ ++||.||++.|+.
T Consensus 423 m~eq~~~~~~ggtmrlg~h~v~l~~g-S~L~~iyG~~~I~erHrHryeVNs~h~q~l~~~GL~vsA~s~DG~IEAIE~~~ 501 (535)
T 3nva_A 423 LDEQKNVTQLGGTMRLGAQKIILKEG-TIAYQLYGKKVVYERHRHRYEVNPKYVDILEDAGLVVSGISENGLVEIIELPS 501 (535)
T ss_dssp BCSSSCBCSSCCCCEEEEEEEEECTT-SHHHHHHTSSEEEEEEEECCEECHHHHHHHHHTTCEEEEECTTCCEEEEECTT
T ss_pred chhcccccccCCccccCceEEEEcCC-CcHHHHhCCCeeeecccccceechHHHhhcccCCeEEEEEeCCCCEEEEEeCC
Confidence 11211 11 0111222221 11233 67888998 9999999999876
Q ss_pred -----CCccCCCCC
Q 014848 202 -----GPHYSGNDP 210 (417)
Q Consensus 202 -----G~qf~~~~~ 210 (417)
|+||+|+..
T Consensus 502 ~pf~vGVQfHPE~~ 515 (535)
T 3nva_A 502 NKFFVATQAHPEFK 515 (535)
T ss_dssp SSCEEEESSCGGGG
T ss_pred CCcEEEEEeCCEec
Confidence 889998654
No 35
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=94.72 E-value=0.0028 Score=56.35 Aligned_cols=110 Identities=9% Similarity=0.068 Sum_probs=64.9
Q ss_pred ccceeeCCCCCCCCChhh-hhhhHHHHHHHhhccCCccc-cccHHHHhHHHHhhhhccccCCCCCcCCHHH---H-----
Q 014848 97 QAKVCTGPTQTRPLREDE-AFKVLDTILRSAKGDLKDEE-EVSKAQLGAFFSAMTIRANAFPEATQWSEGE---R----- 166 (417)
Q Consensus 97 ~~~v~~gp~~~~Pl~~~~-a~~~~~~~l~~~~~~l~~~~-~~~~~q~gaffga~~~r~~~~p~~~~~s~~e---~----- 166 (417)
--.|++++++..+.++.. ....++. ++ ...+|++| |.|+|.|+..+|+.+-.-..+ +++.+... +
T Consensus 38 ~dglil~GG~~~~~~~~~~~~~~~~~-i~--~~~~PilGIC~G~Qll~~~~gg~~~~lg~~--~~~~~~~~~~~~~~~~~ 112 (186)
T 2ywj_A 38 IDALIIPGGESTAIGKLMKKYGLLEK-IK--NSNLPILGTCAGMVLLSKGTGINQILLELM--DITVKRNAYGRQVDSFE 112 (186)
T ss_dssp CSEEEECCSCHHHHHHHHHHTTHHHH-HH--TCCCCEEEETHHHHHHSSCCSSCCCCCCCS--SEEEETTTTCSSSCCEE
T ss_pred CCEEEECCCCchhhhhhhhccCHHHH-HH--hcCCcEEEECHHHHHHHHHhCCCcCccCCC--ceeEEeccCCCccccee
Confidence 356888888765532211 1124455 55 56799999 999999999999874211111 11111000 0
Q ss_pred -----HHHHhh----hhh-hhhhC-CCceEEEeCCCCccccCCCCC--CCccCCCCCc
Q 014848 167 -----RAMNTF----WPL-LMRAL-PPDVIFIADPEGSIMGGGGSI--GPHYSGNDPR 211 (417)
Q Consensus 167 -----~~~~~~----~~~-l~~~L-p~~~~f~a~~~G~iMg~~~~~--G~qf~~~~~~ 211 (417)
..+..+ +-. -+..+ |+.+.++|..||.++|++|+. |+||+|+-..
T Consensus 113 ~~~~~~~~~~~~~~~~H~~~v~~l~~~~~~v~a~sd~~~~a~~~~~~~gvQfHPE~~~ 170 (186)
T 2ywj_A 113 KEIEFKDLGKVYGVFIRAPVVDKILSDDVEVIARDGDKIVGVKQGKYMALSFHPELSE 170 (186)
T ss_dssp EEEEETTTEEEEEEESSCCEEEEECCTTCEEEEEETTEEEEEEETTEEEESSCGGGST
T ss_pred cccccccCCcEEEEEEecceeeecCCCCeEEEEEECCEEEEEeeCCEEEEECCCCcCC
Confidence 000000 000 11467 889999984389999999876 9999997544
No 36
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.79 E-value=0.011 Score=52.20 Aligned_cols=111 Identities=13% Similarity=0.064 Sum_probs=62.5
Q ss_pred cceeeCCCC-CCCCChhh---hhhhHHHHHHHh-hcc-CCccc-cccHHHHhHHHHh-hh----------hccccCCCCC
Q 014848 98 AKVCTGPTQ-TRPLREDE---AFKVLDTILRSA-KGD-LKDEE-EVSKAQLGAFFSA-MT----------IRANAFPEAT 159 (417)
Q Consensus 98 ~~v~~gp~~-~~Pl~~~~---a~~~~~~~l~~~-~~~-l~~~~-~~~~~q~gaffga-~~----------~r~~~~p~~~ 159 (417)
-.|+++.++ +.+ ++ ....++. |+++ ... .|++| |.|+|.|+..+|+ .. ++-+.|.+..
T Consensus 41 dglil~GG~~~~~---~~~~~~~~~~~~-i~~~~~~~~~PilGiC~G~Q~l~~~~gg~~~~~~lg~~~~~~~~~~~g~~~ 116 (191)
T 2ywd_A 41 KALIVPGGESTTI---GKLAREYGIEDE-VRKRVEEGSLALFGTCAGAIWLAKEIVGYPEQPRLGVLEAWVERNAFGRQV 116 (191)
T ss_dssp SEEEECSSCHHHH---HHHHHHTTHHHH-HHHHHHTTCCEEEEETHHHHHHEEEETTCTTCCCCCCEEEEEETTCSCCSS
T ss_pred CEEEECCCChhhh---HHhhhhhhHHHH-HHHHHHCCCCeEEEECHHHHHHHHHhCCCCCCccccccceEEEcCCcCCcc
Confidence 457777773 222 22 2234555 6666 356 99999 9999999999998 32 1111221110
Q ss_pred cCCHHH--HHHHHhh----hhhh-hhhCCCceEEEeCCCCccccCCCCC--CCccCCCCCcc
Q 014848 160 QWSEGE--RRAMNTF----WPLL-MRALPPDVIFIADPEGSIMGGGGSI--GPHYSGNDPRE 212 (417)
Q Consensus 160 ~~s~~e--~~~~~~~----~~~l-~~~Lp~~~~f~a~~~G~iMg~~~~~--G~qf~~~~~~~ 212 (417)
..-+.+ -..+..+ +-.. +..+|+.+.+++..||.++|++++. |+||+|+...+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~Hs~~v~~l~~~~~~~a~~~~~~~a~~~~~~~gvQfHPE~~~~ 178 (191)
T 2ywd_A 117 ESFEEDLEVEGLGSFHGVFIRAPVFRRLGEGVEVLARLGDLPVLVRQGKVLASSFHPELTED 178 (191)
T ss_dssp SEEEEEEEETTTEEEEEEEESCCEEEEECTTCEEEEEETTEEEEEEETTEEEESSCGGGSSC
T ss_pred ccccccccccCCCceeEEEEcccceeccCCCcEEEEEECCEEEEEEECCEEEEEeCCCCCCC
Confidence 000000 0001111 1111 1357888888873368999999987 99999975543
No 37
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=92.22 E-value=0.0063 Score=54.84 Aligned_cols=102 Identities=16% Similarity=0.129 Sum_probs=57.6
Q ss_pred ceeeCCCCCCCCChhhh------hhhHHHHHHHh-hccCCccc-cccHHHHhHH---HH---------hhhhccc--cCC
Q 014848 99 KVCTGPTQTRPLREDEA------FKVLDTILRSA-KGDLKDEE-EVSKAQLGAF---FS---------AMTIRAN--AFP 156 (417)
Q Consensus 99 ~v~~gp~~~~Pl~~~~a------~~~~~~~l~~~-~~~l~~~~-~~~~~q~gaf---fg---------a~~~r~~--~~p 156 (417)
.|++ ||++.| +++ ....+. ||++ ...+|++| |.|+|.|+.. || +.+.+.. +.|
T Consensus 43 ~lil-~G~g~~---~~~~~~l~~~~~~~~-i~~~~~~~~PilGIC~G~Qll~~~~~~~Gg~~~l~~~~g~v~~~~~~~~~ 117 (200)
T 1ka9_H 43 LLVL-PGQGHF---GQVMRAFQESGFVER-VRRHLERGLPFLGICVGMQVLYEGSEEAPGVRGLGLVPGEVRRFRAGRVP 117 (200)
T ss_dssp EEEE-CCCSCH---HHHHHTTSSSCTHHH-HHHHHHTTCCEEECTHHHHTTSSEETTSTTCCCCCSSSSEEEECCSSSSS
T ss_pred EEEE-CCCCcH---HHHHHHHHhcCHHHH-HHHHHHcCCeEEEEcHHHHHHHHhccccCCcCCccccccEEEECCCCCCC
Confidence 3555 776666 332 224555 6664 56799999 9999999999 78 6666552 233
Q ss_pred CCCcCCHHHHHHHHhhhhhh--hh---------hCCCceEEEe-CCC-C-ccccCCCCC---CCccCCCCCc
Q 014848 157 EATQWSEGERRAMNTFWPLL--MR---------ALPPDVIFIA-DPE-G-SIMGGGGSI---GPHYSGNDPR 211 (417)
Q Consensus 157 ~~~~~s~~e~~~~~~~~~~l--~~---------~Lp~~~~f~a-~~~-G-~iMg~~~~~---G~qf~~~~~~ 211 (417)
.. -|.+-+.+. + | ..+ +. ..++. .+ | +++ | .+++..++. |+||+|+...
T Consensus 118 ~~-G~~~v~~~~-~-l-~~~~~~~~~~~Hs~~~~~~~~-~v-a~s~~~g~~~~~~~~~~~i~gvQfHPE~~~ 183 (200)
T 1ka9_H 118 QM-GWNALEFGG-A-F-APLTGRHFYFANSYYGPLTPY-SL-GKGEYEGTPFTALLAKENLLAPQFHPEKSG 183 (200)
T ss_dssp EE-EEEECEECG-G-G-GGGTTCEEEEEESEECCCCTT-CC-EEEEETTEEEEEEEECSSEEEESSCTTSSH
T ss_pred ce-eEEEEEech-h-h-hcCCCCCEEEecccccCCCCC-cE-EEEEeCCeEEEEEEeeCCEEEEecCCCcCc
Confidence 22 232111111 1 1 111 10 11222 22 3 444 7 788888765 9999997764
No 38
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=91.14 E-value=0.015 Score=51.99 Aligned_cols=92 Identities=10% Similarity=0.072 Sum_probs=52.3
Q ss_pred HHHHHHHh-hccCCccc-cccHHHHhHHHHhhhhcc----------ccCCCCCc-CCHHHHHHHHhhhhh---------h
Q 014848 119 LDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRA----------NAFPEATQ-WSEGERRAMNTFWPL---------L 176 (417)
Q Consensus 119 ~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~r~----------~~~p~~~~-~s~~e~~~~~~~~~~---------l 176 (417)
.+. ||++ ....|.+| |.|+|.|+..+|+...+. +.+..... ...+ ..+..++.. .
T Consensus 62 ~~~-i~~~~~~~~pilgIC~G~q~l~~~~gg~~~~~lg~~~~~~~~~~~g~~~~~~~~~--~~~~~~g~~~~~~~~h~~~ 138 (196)
T 2nv0_A 62 MEP-LREFAAQGKPMFGTCAGLIILAKEIAGSDNPHLGLLNVVVERNSFGRQVDSFEAD--LTIKGLDEPFTGVFIRAPH 138 (196)
T ss_dssp HHH-HHHHHHTTCCEEEETHHHHHHSBCCC----CCCCCSCEEEECCCSCTTTSEEEEE--ECCTTCSSCEEEEEESCCE
T ss_pred HHH-HHHHHHCCCcEEEECHHHHHHHHHhcCCCCCcccCCceeEeccCCCcccccccCC--cccccCCCceEEEEEecce
Confidence 455 6665 56799999 999999999999853211 01100000 0000 000001100 1
Q ss_pred hhhCCCceEEEeCCCCccccCCCCC--CCccCCCCCccC
Q 014848 177 MRALPPDVIFIADPEGSIMGGGGSI--GPHYSGNDPREM 213 (417)
Q Consensus 177 ~~~Lp~~~~f~a~~~G~iMg~~~~~--G~qf~~~~~~~m 213 (417)
++.+|+.+.+++..||.++|++++. |+||+|+...+.
T Consensus 139 v~~~~~~~~v~a~~d~~~~a~~~~~~~gvQfHPE~~~~~ 177 (196)
T 2nv0_A 139 ILEAGENVEVLSEHNGRIVAAKQGQFLGCSFHPELTEDH 177 (196)
T ss_dssp EEEECTTCEEEEEETTEEEEEEETTEEEESSCTTSSSCC
T ss_pred ecccCCCcEEEEEECCEEEEEEECCEEEEEECCccCCch
Confidence 1246777788774489999998776 999999876653
No 39
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=89.86 E-value=0.056 Score=48.43 Aligned_cols=94 Identities=11% Similarity=-0.023 Sum_probs=56.2
Q ss_pred hhHHHHHHHh-hccCCccc-cccHHHHhHH--HHhhhhccccCCCCCcCCHHHHH-----HHHhhhh--h-hh---h---
Q 014848 117 KVLDTILRSA-KGDLKDEE-EVSKAQLGAF--FSAMTIRANAFPEATQWSEGERR-----AMNTFWP--L-LM---R--- 178 (417)
Q Consensus 117 ~~~~~~l~~~-~~~l~~~~-~~~~~q~gaf--fga~~~r~~~~p~~~~~s~~e~~-----~~~~~~~--~-l~---~--- 178 (417)
..++. |+++ ....|++| |.|+|.|+.+ +++.+.+....+.|..|.+-+.. ..+.+.. . .+ .
T Consensus 67 ~~~~~-l~~~~~~~~pilgIC~G~qlLa~aGll~g~v~~~~~~~~~~g~~~v~~~~~~~~l~~~~~~~~~~~~~~~H~~~ 145 (213)
T 3d54_D 67 KIAFE-IAKAAERGKLIMGICNGFQILIEMGLLKGALLQNSSGKFICKWVDLIVENNDTPFTNAFEKGEKIRIPIAHGFG 145 (213)
T ss_dssp TTHHH-HHHHHHHTCEEEECHHHHHHHHHHTSSCSEEECCSSSSCBCCEEEEEECCCSSTTSTTSCTTCEEEEECCBSSC
T ss_pred HHHHH-HHHHHHCCCEEEEECHHHHHHHHcCCCCCCeecCCCCceEeeeEEEEeCCCCCceeeccCCCCEEEEEeecCce
Confidence 34555 5555 46789999 9999999999 88887765211225666532211 1111111 0 11 1
Q ss_pred --hC-CCceEEEe-CCC--C---ccccCCCCC----CCccCCCCCc
Q 014848 179 --AL-PPDVIFIA-DPE--G---SIMGGGGSI----GPHYSGNDPR 211 (417)
Q Consensus 179 --~L-p~~~~f~a-~~~--G---~iMg~~~~~----G~qf~~~~~~ 211 (417)
.+ |+...+++ +++ | .|+|+.++. |+||+|+...
T Consensus 146 s~~~~~~~~~~~a~~~~~ng~~~~i~a~~~~~~~~~gvQfHPE~~~ 191 (213)
T 3d54_D 146 RYVKIDDVNVVLRYVKDVNGSDERIAGVLNESGNVFGLMPHPERAV 191 (213)
T ss_dssp EEECSSCCEEEEEESSCSSCCGGGEEEEECSSSCEEEECSCSTTTT
T ss_pred EEEecCCCcEEEEEcCCCCCCccceeEEEcCCCCEEEEeCCHHHhc
Confidence 12 45555655 434 6 899987733 9999997765
No 40
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=89.49 E-value=0.017 Score=53.03 Aligned_cols=91 Identities=7% Similarity=-0.075 Sum_probs=54.4
Q ss_pred HHHHHHHh-hccCCccc-cccHHHHhHHHHhhhhcccc-CCCCCcCCHHHH--HHH----Hhhhhh-------------h
Q 014848 119 LDTILRSA-KGDLKDEE-EVSKAQLGAFFSAMTIRANA-FPEATQWSEGER--RAM----NTFWPL-------------L 176 (417)
Q Consensus 119 ~~~~l~~~-~~~l~~~~-~~~~~q~gaffga~~~r~~~-~p~~~~~s~~e~--~~~----~~~~~~-------------l 176 (417)
++. ||++ ....|++| |.|+|.|+..+|+.+.+.-. +| +..+.... ... +...++ .
T Consensus 84 ~~~-i~~~~~~~~PilGIC~G~QlL~~~~gg~~~~~lg~~~--~~~~~~~~g~~~~~~~~~~~~~g~g~~~~~~~~h~~~ 160 (219)
T 1q7r_A 84 MEP-LKQFAAAGKPMFGTCAGLILLAKRIVGYDEPHLGLMD--ITVERNSFGRQRESFEAELSIKGVGDGFVGVFIRAPH 160 (219)
T ss_dssp HHH-HHHHHHTTCCEEEETTHHHHHEEEEESSCCCCCCCEE--EEEECHHHHCCCCCEEEEEEETTTEEEEEEEESSCCE
T ss_pred HHH-HHHHHHcCCeEEEECHHHHHHHHHhCCCCcCCcCccc--eEEEecCCCccccceecCcccCCCCCceEEEEEecce
Confidence 455 6665 56799999 99999999999986522100 00 00000000 000 000011 1
Q ss_pred hhhCCCceEEEeCCCCccccCCCCC--CCccCCCCCcc
Q 014848 177 MRALPPDVIFIADPEGSIMGGGGSI--GPHYSGNDPRE 212 (417)
Q Consensus 177 ~~~Lp~~~~f~a~~~G~iMg~~~~~--G~qf~~~~~~~ 212 (417)
++.+|+.+.+++..||.++|++++. |+||+|+...+
T Consensus 161 v~~l~~~~~v~a~sdg~~ea~~~~~i~GvQfHPE~~~~ 198 (219)
T 1q7r_A 161 IVEAGDGVDVLATYNDRIVAARQGQFLGCSFHPELTDD 198 (219)
T ss_dssp EEEECTTCEEEEEETTEEEEEEETTEEEESSCGGGSSC
T ss_pred eeccCCCcEEEEEcCCEEEEEEECCEEEEEECcccCCC
Confidence 1356788888874489999998876 99999977654
No 41
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=89.14 E-value=0.043 Score=49.76 Aligned_cols=90 Identities=8% Similarity=-0.068 Sum_probs=53.3
Q ss_pred HHHHHHHh-hccCCccc-cccHHHHhHHHHh-----------hhhccccCCCCCc-CCHHHHHHHHhhh-hh--------
Q 014848 119 LDTILRSA-KGDLKDEE-EVSKAQLGAFFSA-----------MTIRANAFPEATQ-WSEGERRAMNTFW-PL-------- 175 (417)
Q Consensus 119 ~~~~l~~~-~~~l~~~~-~~~~~q~gaffga-----------~~~r~~~~p~~~~-~s~~e~~~~~~~~-~~-------- 175 (417)
.+. |+++ ....|++| |.|+|.|+..+|+ .+.+. .+-.... +.++ ..+..++ ..
T Consensus 81 ~~~-i~~~~~~g~PilGIC~G~QlL~~~~gg~~~~~lg~~~~~v~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~~h~ 156 (208)
T 2iss_D 81 DEK-LVERINNGLPVFATCAGVILLAKRIKNYSQEKLGVLDITVERN-AYGRQVESFETF--VEIPAVGKDPFRAIFIRA 156 (208)
T ss_dssp HHH-HHHHHHTTCCEEEETHHHHHHEEEEC---CCCCCCEEEEEETT-TTCSGGGCEEEE--ECCGGGCSSCEEEEESSC
T ss_pred HHH-HHHHHHCCCeEEEECHHHHHHHHHcCCCCCCCccccceEEEec-CCCcccccccCC--cccccCCCCceEEEEEeC
Confidence 455 6665 56799999 9999999999998 44443 2111000 0000 0000010 00
Q ss_pred -hhhhCCCceEEEeCCCCccccCCCCC--CCccCCCCCcc
Q 014848 176 -LMRALPPDVIFIADPEGSIMGGGGSI--GPHYSGNDPRE 212 (417)
Q Consensus 176 -l~~~Lp~~~~f~a~~~G~iMg~~~~~--G~qf~~~~~~~ 212 (417)
.+..+|+.+.+++..||.++|++++. |+||+|+...+
T Consensus 157 ~~v~~~~~~~~v~a~~d~~~~a~~~~~i~GvQfHPE~~~~ 196 (208)
T 2iss_D 157 PRIVETGKNVEILATYDYDPVLVKEGNILACTFHPELTDD 196 (208)
T ss_dssp CEEEEECSSCEEEEEETTEEEEEEETTEEEESSCGGGSSC
T ss_pred cccccCCCCcEEEEEECCEEEEEEECCEEEEEeCCCcCCc
Confidence 11235778888874479999998766 99999977654
No 42
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=88.68 E-value=5.1 Score=39.51 Aligned_cols=114 Identities=21% Similarity=0.271 Sum_probs=70.6
Q ss_pred CCCCCChhhhhhhHHHHHHHhhccCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhhhhhhCCC---
Q 014848 106 QTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPP--- 182 (417)
Q Consensus 106 ~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~~~l~~~Lp~--- 182 (417)
.+++|+.|||..+++.|+ .|.++..|+|||.-|+-+|+ . |.+|.+.+..--......++.
T Consensus 9 ~g~~Lt~eEa~~~~~~i~---------~g~~~~~QiaAfL~alr~kg---e-----t~~Eiag~~~am~~~~~~~~~~~~ 71 (329)
T 2elc_A 9 LGEVLEEEEAYEVMRALM---------AGEVSPVRAAGLLVALSLRG---E-----RPHEIAAMARAMREAARPLRVHRR 71 (329)
T ss_dssp TTCCCCHHHHHHHHHHHH---------TTCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHHHSCCCCCCCS
T ss_pred cCCCCCHHHHHHHHHHHH---------cCCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHHHHHHhCCCCCCCCC
Confidence 358999999888888865 26788899999999999999 5 777766554332221122221
Q ss_pred ceEEEeCCCCccccCCCCC--------------CCcc--CCC-CCc-cCcHHHHHHHHhcCCCCCHHHHHHHHHHh
Q 014848 183 DVIFIADPEGSIMGGGGSI--------------GPHY--SGN-DPR-EMRLVGALREVLAGGHLGYEEVQGVLRDV 240 (417)
Q Consensus 183 ~~~f~a~~~G~iMg~~~~~--------------G~qf--~~~-~~~-~m~l~~iIkkl~~G~~LT~eEA~~~m~~I 240 (417)
.+.=+++.-|+ +.++ |+.- +++ +.+ ..--.++++.++-.-+++.+|+++.++..
T Consensus 72 ~~vD~~gTGGd----g~~tfNiSt~~a~v~Aa~Gv~V~kHGnr~~ss~~GsaDvLeaLG~~~~~~~~~~~~~l~~~ 143 (329)
T 2elc_A 72 PLLDIVGTGGD----GKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEEL 143 (329)
T ss_dssp SEEEEEECCCC----SSCCCCCHHHHHHHHHHTTCEEEEEECCCTTTTCSHHHHHHHTTCCTTCCHHHHHHHHHHH
T ss_pred CeeEEcCCCCC----CCCccccHHHHHHHHHhCCCCEEEeCCCCCCCcccHHHHHHhCCCCCCCCHHHHHHHHHHC
Confidence 22223333333 2222 3221 121 111 12256788888766789999999998875
No 43
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=87.80 E-value=4.8 Score=40.51 Aligned_cols=114 Identities=25% Similarity=0.303 Sum_probs=71.5
Q ss_pred CCCCCChhhhhhhHHHHHHHhhccCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhhhh-----hhC
Q 014848 106 QTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLM-----RAL 180 (417)
Q Consensus 106 ~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~~~l~-----~~L 180 (417)
.++.|+.|||..+++.|+. |.++..|+|||+-|+-+|+ . |.+|-+.+..--.... ...
T Consensus 35 ~g~~Ls~eEa~~~~~~i~~---------G~~~~~QiaAfL~Alr~kG---e-----t~eEi~g~~~am~~~~~~v~~~~~ 97 (377)
T 3r88_A 35 DNRDLARGQAAWAMDQIMT---------GNARPAQIAAFAVAMTMKA---P-----TADEVGELAGVMLSHAHPLPADTV 97 (377)
T ss_dssp TTCCCCTTHHHHHHHHHHT---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHHHSCCCCTTCS
T ss_pred CCCCCCHHHHHHHHHHHHC---------CCCCHHHHHHHHHHHHHhC---c-----CHHHHHHHHHHHHHhCCcCCCccC
Confidence 4689999998888877542 5777899999999999999 6 7777665544322222 233
Q ss_pred CCceEEEeCCCCccccCCCCC--------------CCcc--CCC-CCcc-CcHHHHHHHHhcCCCCCHHHHHHHHHHh
Q 014848 181 PPDVIFIADPEGSIMGGGGSI--------------GPHY--SGN-DPRE-MRLVGALREVLAGGHLGYEEVQGVLRDV 240 (417)
Q Consensus 181 p~~~~f~a~~~G~iMg~~~~~--------------G~qf--~~~-~~~~-m~l~~iIkkl~~G~~LT~eEA~~~m~~I 240 (417)
|.++.-++..=|+ +.++ |+.- +++ +.+. .--.++|+.++-.-+|+.+++++.++..
T Consensus 98 ~~~~vD~~gTGGd----g~~T~niSt~~A~v~Aa~Gv~VaKHGnR~~ss~~GsaDvLEaLGv~~~l~~e~~~~~l~~~ 171 (377)
T 3r88_A 98 PDDAVDVVGTGGD----GVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEV 171 (377)
T ss_dssp CTTCEEEEECCCC----SCCBCCHHHHHHHHHHHTTCCEEEEECCCSSSSCCHHHHHHHTTCCCCCCHHHHHHHHHHH
T ss_pred CCCCeEEeCCCCC----CcCccccHHHHHHHHHhcCCeEEeECCCCCCCcccHHHHHHHcCCCcccchHHHHHHHHHh
Confidence 3344433433221 1222 3331 122 2111 2256788888666789999999999876
No 44
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=84.36 E-value=8.5 Score=38.22 Aligned_cols=113 Identities=18% Similarity=0.143 Sum_probs=68.6
Q ss_pred CCCCChhhhhhhHHHHHHHhhccCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhhhhhhCCC-ceE
Q 014848 107 TRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPP-DVI 185 (417)
Q Consensus 107 ~~Pl~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~~~l~~~Lp~-~~~ 185 (417)
+++|+.|||..+++.|+. |.++..|+|||.-|+-+|+ . |.+|-+.+..--......++. ++.
T Consensus 13 g~~Lt~eEa~~~~~~i~~---------g~~~~~QiaAfL~alr~kg---e-----t~eEiag~~~am~~~~~~~~~~~~v 75 (345)
T 1o17_A 13 KSDLEINEAEELAKAIIR---------GEVPEILVSAILVALRMKG---E-----SKNEIVGFARAMRELAIKIDVPNAI 75 (345)
T ss_dssp TCCCCHHHHHHHHHHHHT---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHHHSCCCCCTTCE
T ss_pred CCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHHHHHHhCCCCCCCCce
Confidence 489999998888888652 6778899999999999999 5 777766554432222223332 222
Q ss_pred EEeCCCCccccCCCCC------------CCcc---CCCC-C-ccCcHHHHHHHHhcCCCCCHHHHHHHHHHh
Q 014848 186 FIADPEGSIMGGGGSI------------GPHY---SGND-P-REMRLVGALREVLAGGHLGYEEVQGVLRDV 240 (417)
Q Consensus 186 f~a~~~G~iMg~~~~~------------G~qf---~~~~-~-~~m~l~~iIkkl~~G~~LT~eEA~~~m~~I 240 (417)
=+++.-|+ +.++ +-.. +++. . ...--.++++.++-.-+++.+|+++.++..
T Consensus 76 D~~gTGGd----g~~tfNiSt~~A~v~Aa~v~VaKHGnR~~ss~~GsaDvLEaLGv~~~~~~e~~~~~l~~~ 143 (345)
T 1o17_A 76 DTAGTGGD----GLGTVNVSTASAILLSLVNPVAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVNKT 143 (345)
T ss_dssp ECCC--------CCCBCCHHHHHHHHHTTTSCEEEEECCCSSSSCSHHHHHHHHTBCCCCCHHHHHHHHHHH
T ss_pred eeCCCCCC----CCCccchHHHHHHHHHHcCCEEEECCCCCCCcccHHHHHHhCCCCCCCCHHHHHHHHHHc
Confidence 12222222 2222 1110 1211 1 112256788888777789999999888875
No 45
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=83.23 E-value=0.044 Score=57.69 Aligned_cols=104 Identities=15% Similarity=0.078 Sum_probs=56.8
Q ss_pred HHHHHHHh-hccCCccc-cccHHHHhHHH------------Hhhhhccc----cCCCCCcCCHHHHH--HHHhhhh---h
Q 014848 119 LDTILRSA-KGDLKDEE-EVSKAQLGAFF------------SAMTIRAN----AFPEATQWSEGERR--AMNTFWP---L 175 (417)
Q Consensus 119 ~~~~l~~~-~~~l~~~~-~~~~~q~gaff------------ga~~~r~~----~~p~~~~~s~~e~~--~~~~~~~---~ 175 (417)
++. |+++ ...+|.+| |+|+|.|+.++ ++.+.|.. ++|.+| |.+-+.+ .+..+.. .
T Consensus 69 ~~~-i~~~~~~g~PiLGIC~G~QlL~~a~~egg~~~~Lg~lgg~v~~~~~~~~~~~~~G-~~~v~~~~~L~~~l~~~~~~ 146 (555)
T 1jvn_A 69 EKP-IREYIESGKPIMGIXVGLQALFAGSVESPKSTGLNYIDFKLSRFDDSEKPVPEIG-WNSCIPSENLFFGLDPYKRY 146 (555)
T ss_dssp HHH-HHHHHHTTCCEEEEEHHHHTTEEEETTBTTCCCCCSEEEEEEECCTTTSCSSEEE-EECCCCCTTCCTTCCTTSCE
T ss_pred HHH-HHHHHHcCCcEEEEchhhhhhhhhhhcCCCccccCCCCcEEEECCcCCCCCcccc-ceEEEEcCHHHhhCCCCceE
Confidence 455 5555 56799999 99999999988 77777652 233332 2211110 0000000 0
Q ss_pred hh---------hh----CCCceEEEe-CC---CCccccCCCCC--CCccCCCCCccCcHHHHHHHHhcC
Q 014848 176 LM---------RA----LPPDVIFIA-DP---EGSIMGGGGSI--GPHYSGNDPREMRLVGALREVLAG 225 (417)
Q Consensus 176 l~---------~~----Lp~~~~f~a-~~---~G~iMg~~~~~--G~qf~~~~~~~m~l~~iIkkl~~G 225 (417)
++ .. ||+.+.++| ++ ||.+|++++.. |+||||+-..+ .-..+++...+.
T Consensus 147 ~~vHS~~~~~i~~~~~~L~~g~~vlA~s~~~~D~~i~ai~~~~i~GvQFHPE~s~~-~g~~l~~~Fl~~ 214 (555)
T 1jvn_A 147 YFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNKNNIFATQFHPEKSGK-AGLNVIENFLKQ 214 (555)
T ss_dssp EEEESEECBCCHHHHHHHHHTTCEEEEEEETTEEEEEEEEETTEEEESSBGGGSHH-HHHHHHHHHHTT
T ss_pred EEEEEEEEEecccccccCCCCCEEEEEEcCCCCCeEEEEEeCCEEEEEeCcEecCh-hHHHHHHHHHhc
Confidence 00 11 133444444 33 57899998655 99999974422 123455555554
No 46
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=75.03 E-value=13 Score=38.25 Aligned_cols=148 Identities=9% Similarity=0.021 Sum_probs=84.1
Q ss_pred CCCCChhhhhhhHHHHHHHhhccCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhhhhhhCC-----
Q 014848 107 TRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALP----- 181 (417)
Q Consensus 107 ~~Pl~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~~~l~~~Lp----- 181 (417)
+++|+.|||.-.++.|+. |.++..|+|||+-|+-+|+ . |.+|...+..--......++
T Consensus 16 g~~Lt~eEa~~~~~~i~~---------G~~sd~QiaAfL~Alr~kG---e-----t~eEiag~~~Am~~~~~~~~~~~~~ 78 (436)
T 3h5q_A 16 GHTLTTEEINFFIGGYVK---------GDIPDYQASSLAMAIYFQD---M-----NDDERVALTMAMVNSGDMIDLSDIK 78 (436)
T ss_dssp TCCCCHHHHHHHHHHHHH---------TSSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHTTSCCCCCTTSC
T ss_pred CCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHcC---C-----CHHHHHHHHHHHHHhCCcCCccccC
Confidence 489999998888888653 5677799999999999999 4 66676554433221111221
Q ss_pred CceEEEeCCCCccccCCCCC-----------CCcc--CCCCC--ccCcHHHHHHHH-hcCCCCCHHHHHHHHHHhcCCcc
Q 014848 182 PDVIFIADPEGSIMGGGGSI-----------GPHY--SGNDP--REMRLVGALREV-LAGGHLGYEEVQGVLRDVLPLQV 245 (417)
Q Consensus 182 ~~~~f~a~~~G~iMg~~~~~-----------G~qf--~~~~~--~~m~l~~iIkkl-~~G~~LT~eEA~~~m~~IL~~~~ 245 (417)
..+.=+++.-|+ +.++ |+.- +++.- ...--.+.|+.+ +-.-+++.+|+.+.++..= +..
T Consensus 79 ~~~vD~~gTGGd----G~~tSt~~A~vvAa~Gv~VaKHGnRa~ss~~GsaDvLEaLpGi~~~ls~e~~~~~l~~~g-~~f 153 (436)
T 3h5q_A 79 GVKVDKHSTGGV----GDTTTLVLAPLVAAVDVPVAKMSGRGLGHTGGTIDKLEAIDGFHVEIDEATFVKLVNENK-VAV 153 (436)
T ss_dssp SCCEEEEECCCT----TCCHHHHHHHHHHHTTCCEEEECCCCSSSSCCHHHHHTTSTTCCCCCCHHHHHHHHHHHS-EEE
T ss_pred CCceeecCCCCC----CCChHHHHHHHHHhCCCCEEeECCCCCCCcccHHHHHHhCcCCCCCCCHHHHHHHHHHcC-CEE
Confidence 122223333333 2222 3331 22221 222256788888 7677899999999999652 111
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 014848 246 DNKAPGVSESLLSAFLIGQRMNRETDRELKAYCL 279 (417)
Q Consensus 246 ~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~ 279 (417)
-.......++-- .|.++|-.=-|.+-+ -++.
T Consensus 154 l~~a~~~~Pa~~--~l~~lR~~~~Tvfni-PLin 184 (436)
T 3h5q_A 154 VGQSGNLTPADK--KLYALRDVTGTVNSI-PLIA 184 (436)
T ss_dssp ECCCSSSCHHHH--HHHHHHHTTTCSSCH-HHHH
T ss_pred EccccccCHHHH--HHHHHHhccCCcCCh-hhhc
Confidence 111356666522 334555332255555 4443
No 47
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=74.96 E-value=11 Score=38.64 Aligned_cols=116 Identities=14% Similarity=0.104 Sum_probs=71.2
Q ss_pred CCCCCChhhhhhhHHHHHHHhhccCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhhhhhhC--C--
Q 014848 106 QTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRAL--P-- 181 (417)
Q Consensus 106 ~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~~~l~~~L--p-- 181 (417)
.++.|+.||+.-+++.|+. |.++..|+|||.-|+-+|+ . |.+|.+.+..--......+ |
T Consensus 12 ~g~~Lt~eEa~~~~~~i~~---------G~~sd~QiaAfL~Alr~kG---e-----t~eEiag~a~AM~~~~~~v~~~~~ 74 (433)
T 1brw_A 12 DGKALTKEEIEWIVRGYTN---------GDIPDYQMSALAMAIYFRG---M-----TEEETAALTMAMVQSGEMLDLSSI 74 (433)
T ss_dssp TTCCCCHHHHHHHHHHHHT---------TSSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHHTSCCCCCTTS
T ss_pred cCCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHHHHHHhCCcCCcccc
Confidence 4788999998888887552 6778899999999999999 5 7777665543322111122 2
Q ss_pred -CceEEEeCCCCccccCCCCC---------CCcc--CCCC-C-ccCcHHHHHHHH-hcCCCCCHHHHHHHHHHh
Q 014848 182 -PDVIFIADPEGSIMGGGGSI---------GPHY--SGND-P-REMRLVGALREV-LAGGHLGYEEVQGVLRDV 240 (417)
Q Consensus 182 -~~~~f~a~~~G~iMg~~~~~---------G~qf--~~~~-~-~~m~l~~iIkkl-~~G~~LT~eEA~~~m~~I 240 (417)
..+.=+++.=|+ |-+-++ |+.- +++. . ...--.+.|+.+ +=.-+|+.+|+...++..
T Consensus 75 ~~~~vD~~gTGGd--G~~iSt~~A~vvAa~Gv~VaKHGnRa~ss~~GsaDvLEaL~Gv~i~ls~e~~~~~l~~~ 146 (433)
T 1brw_A 75 RGVKVDKHSTGGV--GDTTTLVLGPLVASVGVPVAKMSGRGLGHTGGTIDKLESVPGFHVEISKDEFIRLVNEN 146 (433)
T ss_dssp CSCCEEEEECCCS--SCCHHHHHHHHHHTTTCCEEEEECCCBTTBCCHHHHHTTSTTCCCCCCHHHHHHHHHHH
T ss_pred cCCceeeCCCCCC--CcchHHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHCcCceecCCHHHHHHHHHHc
Confidence 123333444333 221111 3331 2222 1 112244788887 777799999999999975
No 48
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=72.60 E-value=16 Score=37.97 Aligned_cols=140 Identities=15% Similarity=0.112 Sum_probs=81.1
Q ss_pred CCCCCChhhhhhhHHHHHHHhhccCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhhhhhhC--CC-
Q 014848 106 QTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRAL--PP- 182 (417)
Q Consensus 106 ~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~~~l~~~L--p~- 182 (417)
.++.|+.||+.-+++.|+. |.++..|+|||.-|+-+|+ . |.+|.+.+..--......+ |.
T Consensus 39 ~g~~Lt~eEa~~~~~~i~~---------G~~sd~QiaAfLmAlr~kG---e-----T~eEiag~a~AMr~~~~~v~~~~~ 101 (474)
T 1uou_A 39 DGGRLSEADIRGFVAAVVN---------GSAQGAQIGAMLMAIRLRG---M-----DLEETSVLTQALAQSGQQLEWPEA 101 (474)
T ss_dssp TTCCCCHHHHHHHHHHHHH---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHTTSCCCCCCGG
T ss_pred cCCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHHHHHHhCCcCCcccc
Confidence 5789999998888888653 5677799999999999999 5 7777665543322111122 21
Q ss_pred ---ceEEEeCCCCccccCCCCC---------CCcc--CCCCC--ccCcHHHHHHHH-hcCCCCCHHHHHHHHHHhcCCcc
Q 014848 183 ---DVIFIADPEGSIMGGGGSI---------GPHY--SGNDP--REMRLVGALREV-LAGGHLGYEEVQGVLRDVLPLQV 245 (417)
Q Consensus 183 ---~~~f~a~~~G~iMg~~~~~---------G~qf--~~~~~--~~m~l~~iIkkl-~~G~~LT~eEA~~~m~~IL~~~~ 245 (417)
.+.=+++.=|+ |-+-++ |+.- +++.- ...--.+.|+.+ +=.-+|+.+|+..+++..= +..
T Consensus 102 ~~~~~vD~~gTGGd--G~~iSt~~A~vvAa~Gv~VaKHGnRa~ss~~GSaDvLEaLpGv~i~ls~e~~~~~l~~~G-i~f 178 (474)
T 1uou_A 102 WRQQLVDKHSTGGV--GDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQAG-CCI 178 (474)
T ss_dssp GGGGBEEEEESCCT--TCCHHHHHHHHHHTTTCBEEEECCCCBTTBCCHHHHHTTSTTCCCCCCHHHHHHHHHHHS-EEE
T ss_pred cCCCeeEeCCCCCC--CceeHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHhCCCCCCCCCHHHHHHHHHHcC-eEE
Confidence 23333444333 211111 3331 22222 112255788888 7777999999999999752 111
Q ss_pred CCCCCCCCHHHHHHHHHHHHhc
Q 014848 246 DNKAPGVSESLLSAFLIGQRMN 267 (417)
Q Consensus 246 ~~~~Gevsd~QigAFL~ALR~K 267 (417)
-.......++-. .+.++|-.
T Consensus 179 l~a~~~~hPA~k--~l~~lR~~ 198 (474)
T 1uou_A 179 VGQSEQLVPADG--ILYAARDV 198 (474)
T ss_dssp ECCCSSSSHHHH--HHHHHHHH
T ss_pred ecCchhhCHHHH--HHHHHHhh
Confidence 112245666543 23445433
No 49
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=72.27 E-value=8.6 Score=39.47 Aligned_cols=118 Identities=18% Similarity=0.131 Sum_probs=70.8
Q ss_pred CCCCCCCChhhhhhhHHHHHHHhhccCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhhhhhhCCC-
Q 014848 104 PTQTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPP- 182 (417)
Q Consensus 104 p~~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~~~l~~~Lp~- 182 (417)
...++.|+.||+.-+++.|+ + |.++..|+|||+-|+-+|+ . |.+|.+.+..--......++.
T Consensus 10 ~~~g~~Lt~eEa~~~~~~i~--------~-G~~~d~QiaAfL~Al~~kG---e-----t~eEiag~a~aM~~~~~~l~~~ 72 (423)
T 2dsj_A 10 KREGKKHRREDLEAFLLGYL--------R-DEVPDYQVSAWLMAAFLRG---L-----DPEETLWLTETMARSGKVLDLS 72 (423)
T ss_dssp HHTTCCCCHHHHHHHHHHHH--------T-TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHTSSBCCCCT
T ss_pred HhcCCCCCHHHHHHHHHHHH--------c-CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHHHHHHhCCcCCcc
Confidence 34678999999877777744 2 5777799999999999999 6 778866555332211112211
Q ss_pred ---ceEEEeCCCCccccCCCCC---------CCcc--CCC-CCcc-CcHHHHHHHH-hcCCCCCHHHHHHHHHHh
Q 014848 183 ---DVIFIADPEGSIMGGGGSI---------GPHY--SGN-DPRE-MRLVGALREV-LAGGHLGYEEVQGVLRDV 240 (417)
Q Consensus 183 ---~~~f~a~~~G~iMg~~~~~---------G~qf--~~~-~~~~-m~l~~iIkkl-~~G~~LT~eEA~~~m~~I 240 (417)
.+.=+++.=|+ |..-++ |+.- +++ +.+. .--.+.|+.+ +=.-+++.||++..++..
T Consensus 73 ~~~~~vD~~gTGGd--G~niSt~~a~vvAa~Gv~VaKhGnR~~ss~~GsaDvLEaL~Gv~i~l~~e~~~~~l~~~ 145 (423)
T 2dsj_A 73 GLPHPVDKHSSGGV--GDKVSLVVGPILAASGCTFAKMSGRGLAHTGGTIDKLESVPGWRGEMTEAEFLERARRV 145 (423)
T ss_dssp TSSSBEEEEEESSS--CCSTHHHHHHHHHTTTCBEEEECCCCBTTBCCHHHHHTTSTTCCCCCCHHHHHHHHHHT
T ss_pred ccCCceeEecCCCC--CccHHHHHHHHHHhCCCcEEEECCCCCCCCccHHHHHHhCCCCCCCCCHHHHHHHHHHc
Confidence 12212222222 221111 3331 222 1111 2256788888 777789999999999986
No 50
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV}
Probab=72.22 E-value=4.6 Score=39.98 Aligned_cols=114 Identities=24% Similarity=0.308 Sum_probs=65.9
Q ss_pred CCCCCChhhhhhhHHHHHHHhhccCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhhhhhhCC--C-
Q 014848 106 QTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALP--P- 182 (417)
Q Consensus 106 ~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~~~l~~~Lp--~- 182 (417)
.+|.|+.|||..+++.|+. |.++..|+|||+-|+-+|+ . |.+|-+.+..--......++ .
T Consensus 15 ~~~~Lt~eEa~~~~~~il~---------G~~~d~QiaAfL~alr~kg---e-----t~eEi~g~~~am~~~~~~v~~~~~ 77 (346)
T 4hkm_A 15 EHREIFHDEMVDLMRQIMR---------GEVSDAMVSAILTGLRVKK---E-----TIGEIAGAATVMREFSRRVEVTDR 77 (346)
T ss_dssp TTCCCCHHHHHHHHHHHHT---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHHHSCCCCCSCC
T ss_pred cCCCCCHHHHHHHHHHHHC---------CCCCHHHHHHHHHHHHHHC---c-----CHHHHHHHHHHHHHhCCCCCCCCC
Confidence 4689999998888887652 5777899999999999999 5 77776654443222222332 1
Q ss_pred -ceEEEeCCCCccccCCCCC--------------CCcc--CCCCCcc--CcHHHHHHHHhcCCCCCHHHHHHHHHHh
Q 014848 183 -DVIFIADPEGSIMGGGGSI--------------GPHY--SGNDPRE--MRLVGALREVLAGGHLGYEEVQGVLRDV 240 (417)
Q Consensus 183 -~~~f~a~~~G~iMg~~~~~--------------G~qf--~~~~~~~--m~l~~iIkkl~~G~~LT~eEA~~~m~~I 240 (417)
.+.=+++.=| .+.++ |+.- +++.-.. .--.+.++.++-.-+|+.+|+++.++..
T Consensus 78 ~~~vD~~gTGG----dg~~t~niSt~~a~v~Aa~G~~V~khG~r~~ss~~GsaD~LeaLG~~~~ls~~~~~~~l~~~ 150 (346)
T 4hkm_A 78 RHMVDIVGTGG----DGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVAASLAQT 150 (346)
T ss_dssp TTEEEEECC----------CCCHHHHHHHHHHHTTCEEEEEC---------CHHHHHTTTCCCCCCHHHHHHHHHHH
T ss_pred ccceeecCCCC----CCccccCcHHHHHHHHHhcCCCeeecCCCCCCCCcCHHHHHHHcCCCcccCHHHHHHHHHhc
Confidence 2222222222 12222 3221 1221111 1124678887666688999999888876
No 51
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP}
Probab=69.65 E-value=5.6 Score=39.99 Aligned_cols=48 Identities=23% Similarity=0.324 Sum_probs=38.7
Q ss_pred CCCCChhhhhhhHHHHHHHhhccCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHh
Q 014848 107 TRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNT 171 (417)
Q Consensus 107 ~~Pl~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~ 171 (417)
+++|+.|||..+++.|+. |.++..|+|||+-|+-+|+ . |.+|-+.+..
T Consensus 37 G~~Lt~eEa~~~~~~il~---------G~~~~~QiaAfL~Alr~kG---e-----t~eEiag~~~ 84 (374)
T 1vqu_A 37 GESLSRSQAAELMQGWLS---------EAVPPELSGAILTALNFKG---V-----SADELTGMAE 84 (374)
T ss_dssp TCCCCHHHHHHHHHHHHT---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHH
Confidence 489999998888888652 6778899999999999999 5 7777665443
No 52
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=69.20 E-value=5 Score=39.88 Aligned_cols=113 Identities=18% Similarity=0.252 Sum_probs=65.4
Q ss_pred CCCCChhhhhhhHHHHHHHhhccCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhhhhhhCCCc---
Q 014848 107 TRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRALPPD--- 183 (417)
Q Consensus 107 ~~Pl~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~~~l~~~Lp~~--- 183 (417)
+++|+.|||..+++.|+ + |.++..|+|||+-|+-+|+ . |.+|-+.+..--......++.+
T Consensus 23 g~~Lt~eEa~~~~~~il--------~-g~~~~~QiaAfL~alr~kg---e-----t~eEiag~~~am~~~~~~~~~~~~~ 85 (345)
T 1khd_A 23 SQSMTQEESHQLFAAIV--------R-GELEDSQLAAALISMKMRG---E-----RPEEIAGAASALLADAQPFPRPDYD 85 (345)
T ss_dssp TCCCCHHHHHHHHHHHT--------T-TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHHTSCCCCCCSSC
T ss_pred CCCCCHHHHHHHHHHHH--------c-CCCCHHHHHHHHHHHHHhC---C-----CHHHHHHHHHHHHHhCCcCCCCCCC
Confidence 48999999888777754 2 6788899999999999999 5 7777665544322222223221
Q ss_pred eEEEeCCCCccccCCCCC--------------CCcc--CCCCCc-c--CcHHHHHHHHhcCCCCCHHHHHHHHHHh
Q 014848 184 VIFIADPEGSIMGGGGSI--------------GPHY--SGNDPR-E--MRLVGALREVLAGGHLGYEEVQGVLRDV 240 (417)
Q Consensus 184 ~~f~a~~~G~iMg~~~~~--------------G~qf--~~~~~~-~--m~l~~iIkkl~~G~~LT~eEA~~~m~~I 240 (417)
+.=++..= |.+.++ |+.- +++.-. . .--.++++.++-.-+++.+|+++.++..
T Consensus 86 ~vD~~gTG----Gdg~~tfNiSt~~A~v~Aa~Gv~VakHGnr~~ss~~~GsaDvLeaLGv~~~~~~~~~~~~l~~~ 157 (345)
T 1khd_A 86 FADIVGTG----GDGTNSINISTASAFVAASCGAKVAKHGNRSVCQPLAGSCDLLQAFGIRLDMSAEDSRQALDDL 157 (345)
T ss_dssp CEEEEECC----CCSSCBCCCHHHHHHHHHHHTCCEEEEECC---------CHHHHHTTCCTTCCHHHHHHHHHHH
T ss_pred eeeecCCC----CCCCCccchHHHHHHHHHhCCCcEEEeCCCCCCCCcccHHHHHHhCCCCCCCCHHHHHHHHHHC
Confidence 11011111 111122 3221 122111 1 1135677887666688888888888875
No 53
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=65.96 E-value=24 Score=29.85 Aligned_cols=71 Identities=11% Similarity=0.065 Sum_probs=54.3
Q ss_pred CCCccCcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 014848 208 NDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFD 282 (417)
Q Consensus 208 ~~~~~m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr 282 (417)
+.-|..++..++.-+.+ .||.+|+.++...+.. .......++...++.+...+.-.--|++|+.-...-+.
T Consensus 26 eGVP~~Dy~PLlALL~R--~Ltddev~~Va~~L~~--~~~~~~pi~~~dI~~~It~vT~~~P~~eDi~RV~arLa 96 (107)
T 3ol3_A 26 EGVPPKDYFALLALLKR--SLTEDEVVRAAQAILR--STDGQSPVTDDDIRNAVHQIIEKEPTAEEINQVAARLA 96 (107)
T ss_dssp TCBCGGGHHHHHHHHTC--CCCHHHHHHHHHHHHH--HCCSSSCBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHH
T ss_pred CCCCCCccHHHHHHhcc--cCCHHHHHHHHHHHHh--ccCCCCCCCHHHHHHHHHHHhcCCcCHHHHHHHHHHHH
Confidence 44566677777776655 4999999999999982 11111238999999999999999999999988776665
No 54
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=62.80 E-value=2.8 Score=37.22 Aligned_cols=104 Identities=11% Similarity=0.067 Sum_probs=56.9
Q ss_pred ceeeCCCCCCCCChhhhhh------hHHHHHHHh-hccCCccc-cccHHHHhHHHH------------hhhhccc--cCC
Q 014848 99 KVCTGPTQTRPLREDEAFK------VLDTILRSA-KGDLKDEE-EVSKAQLGAFFS------------AMTIRAN--AFP 156 (417)
Q Consensus 99 ~v~~gp~~~~Pl~~~~a~~------~~~~~l~~~-~~~l~~~~-~~~~~q~gaffg------------a~~~r~~--~~p 156 (417)
.|++ ||++.| +++.. .++. |+++ ...+|++| |.|+|.|+..+| +.+.+.. +.|
T Consensus 45 glil-pG~g~~---~~~~~~l~~~~~~~~-i~~~~~~~~PilGIC~G~Qll~~~~g~~G~~~~l~~~~g~v~~~~~~~~~ 119 (201)
T 1gpw_B 45 LLFI-PGVGHF---GEGMRRLRENDLIDF-VRKHVEDERYVVGVCLGMQLLFEESEEAPGVKGLSLIEGNVVKLRSRRLP 119 (201)
T ss_dssp EEEE-CCCSCS---HHHHHHHHHTTCHHH-HHHHHHTTCEEEEETHHHHTTSSEETTEEEEECCCSSSEEEEECCCSSCS
T ss_pred EEEE-CCCCcH---HHHHHHHHhhCHHHH-HHHHHHcCCeEEEEChhHHHHHHhhccCCCCCCcceeeeEEEEcCCCCCC
Confidence 3555 666666 33321 4455 6666 56799999 999999999986 3333331 112
Q ss_pred CCCcCCHHHHH-----HHHhhhhh-hhhhCCCceEEEe-CCC-C-ccccCCCCC---CCccCCCCC
Q 014848 157 EATQWSEGERR-----AMNTFWPL-LMRALPPDVIFIA-DPE-G-SIMGGGGSI---GPHYSGNDP 210 (417)
Q Consensus 157 ~~~~~s~~e~~-----~~~~~~~~-l~~~Lp~~~~f~a-~~~-G-~iMg~~~~~---G~qf~~~~~ 210 (417)
|-.|++-... ...+++-. -+..+ .+.++| +++ | .|+++.++. |+||+|+..
T Consensus 120 -~~g~~~l~~~~~~~~~~v~~~H~~~v~~~--~~~vla~s~~~g~~~~a~~~~~~i~gvQfHPE~~ 182 (201)
T 1gpw_B 120 -HMGWNEVIFKDTFPNGYYYFVHTYRAVCE--EEHVLGTTEYDGEIFPSAVRKGRILGFQFHPEKS 182 (201)
T ss_dssp -EEEEEEEEESSSSCCEEEEEEESEEEEEC--GGGEEEEEEETTEEEEEEEEETTEEEESSCGGGS
T ss_pred -cccceeeEeccCCCCCeEEEECcceeccC--CCEEEEEEccCCceEEEEEECCCEEEEECCCccc
Confidence 2224311100 00000000 00222 344555 444 7 799998765 999999766
No 55
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=60.59 E-value=11 Score=38.89 Aligned_cols=114 Identities=13% Similarity=0.112 Sum_probs=70.6
Q ss_pred CCCCCChhhhhhhHHHHHHHhhccCCccccccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhhhhhhC--CC-
Q 014848 106 QTRPLREDEAFKVLDTILRSAKGDLKDEEEVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPLLMRAL--PP- 182 (417)
Q Consensus 106 ~~~Pl~~~~a~~~~~~~l~~~~~~l~~~~~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~~~l~~~L--p~- 182 (417)
.++.|+.||+.-+++.|+. |.++..|+|||+-|+-+|+ . |.+|.+.+..--......+ |.
T Consensus 13 ~g~~Lt~eEa~~~~~~i~~---------G~~sd~QiaAfL~Alr~kG---e-----t~eEiag~~~Am~~~~~~~~~~~~ 75 (440)
T 2tpt_A 13 DGHALSDEEIRFFINGIRD---------NTISEGQIAALAMTIFFHD---M-----TMPERVSLTMAMRDSGTVLDWKSL 75 (440)
T ss_dssp TTCCCCHHHHHHHHHHHHH---------TCSCHHHHHHHHHHHHHHC---C-----CHHHHHHHHHHHHHTSBCCCCTTT
T ss_pred cCCCCCHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHcC---C-----CHHHHHHHHHHHHHhCCcCCCccc
Confidence 4588999998888888653 5677799999999999999 5 7777665543322111122 21
Q ss_pred ----ceEEEeCCCCccccCCCCC-----------CCcc--CCCC-C-ccCcHHHHHHHH-hcCCCCCHHHHHHHHHHh
Q 014848 183 ----DVIFIADPEGSIMGGGGSI-----------GPHY--SGND-P-REMRLVGALREV-LAGGHLGYEEVQGVLRDV 240 (417)
Q Consensus 183 ----~~~f~a~~~G~iMg~~~~~-----------G~qf--~~~~-~-~~m~l~~iIkkl-~~G~~LT~eEA~~~m~~I 240 (417)
.+.=+++.=|+ +.++ |+.- +++. . ...--.+.|+.+ +=.-+++.+|++..++..
T Consensus 76 ~~~~~~vD~~gTGGd----G~~iSt~~A~vvAa~Gv~VaKHGnR~~ss~~GsaDvLEaL~Gv~~~ls~e~~~~~l~~~ 149 (440)
T 2tpt_A 76 HLNGPIVDKHSTGGV----GDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDV 149 (440)
T ss_dssp TCSSCBEEEEECCCS----SCCHHHHHHHHHHHTTCBEEEEECCCCTTSCCHHHHHTTSTTCCSCCCHHHHHHHHHHT
T ss_pred ccCCCeeeeCCCCCC----CccHHHHHHHHHHhCCCcEEEECCCCCCCcccHHHHHHhCcCCCCCCCHHHHHHHHHHc
Confidence 22222333333 2222 3331 1222 1 122256778877 777799999999999975
No 56
>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str}
Probab=54.47 E-value=11 Score=32.10 Aligned_cols=68 Identities=7% Similarity=0.037 Sum_probs=52.9
Q ss_pred CCCccCcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 014848 208 NDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDD 283 (417)
Q Consensus 208 ~~~~~m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~ 283 (417)
+.-|..++..++.-+. +.||.+|+.++.+.+.. +|.+++..++++..-+.-.--+++++.-...-+.+
T Consensus 23 ~GVP~~Dy~PLLALL~--r~Ltdeev~~Va~~L~~------~~~i~~~dI~~~I~~vt~~~Ps~eDI~RV~arLaa 90 (112)
T 2lky_A 23 EGVPGPDRVPLLALLT--RRLTNDEIKAIAEDLEK------RAHFDHIDIGVLITQMTDEMPREEDIERVRRHLAL 90 (112)
T ss_dssp SCCCHHHHHHHHHHHT--TTCCHHHHHHHHHHHHH------HCCCSCCCSHHHHHHHTTCCCCHHHHHHHHHHHHT
T ss_pred CCCCCcchHHHHHHHc--ccCCHHHHHHHHHHHHH------cCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHh
Confidence 3345555565665554 67999999999999983 57799999999999999888899999887766653
No 57
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=53.10 E-value=1.5e+02 Score=28.00 Aligned_cols=155 Identities=17% Similarity=0.125 Sum_probs=89.4
Q ss_pred cHHHHHHHHhcCCCCCHHHH----HHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhc--------CCCHHH--HHHHHH
Q 014848 214 RLVGALREVLAGGHLGYEEV----QGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMN--------RETDRE--LKAYCL 279 (417)
Q Consensus 214 ~l~~iIkkl~~G~~LT~eEA----~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~K--------GET~eE--LaGfa~ 279 (417)
++...++++.....++++.. +++-+.++ ..+++..-.-.|+-.++-+ +.++.| +....+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-------~~dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (297)
T 1j8m_F 6 NLRDTVRKFLTGSSSYDKAVEDFIKELQKSLI-------SADVNVKLVFSLTNKIKERLKNEKPPTYIERREWFIKIVYD 78 (297)
T ss_dssp HHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHH-------HTTCCHHHHHHHHHHHHHHHHHCCCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHhhccccccCChHHHHHHHHHH
Confidence 46778889988888998544 44555666 7889988888888776653 335433 233444
Q ss_pred HHHhhcCCCC---C--C-CCCCceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCCcHHH----HHHh
Q 014848 280 AFDDELGPPP---V--A-DVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQ----MLKF 349 (417)
Q Consensus 280 Amr~~~~~~~---~--~-~~~~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGvTsaD----vLea 349 (417)
.+....+... . . ....+-.+|.+|.||+ |. ...+|..++..|.+|+.-+.+-..+ + +.+ ..+.
T Consensus 79 ~l~~~~~~~~~~~i~~~~~~~vi~i~G~~G~GKT-T~--~~~la~~~~~~g~~v~l~~~D~~r~--~--a~~ql~~~~~~ 151 (297)
T 1j8m_F 79 ELSNLFGGDKEPKVIPDKIPYVIMLVGVQGTGKT-TT--AGKLAYFYKKKGFKVGLVGADVYRP--A--ALEQLQQLGQQ 151 (297)
T ss_dssp HHHHHTTCSCCCCCSCSSSSEEEEEECSSCSSTT-HH--HHHHHHHHHHTTCCEEEEECCCSSS--H--HHHHHHHHHHH
T ss_pred HHHHHhccccccccccCCCCeEEEEECCCCCCHH-HH--HHHHHHHHHHCCCeEEEEecCCCCH--H--HHHHHHHHhcc
Confidence 5544443321 1 0 0112457799999997 21 2223334566799999988765332 1 222 2345
Q ss_pred CCCCCC-----CCHHHH----HHHHhhcCCcEEEEeCCccCH
Q 014848 350 MGASTN-----LSVLQA----KELLEDEEIGFAYVSLREARP 382 (417)
Q Consensus 350 LGi~i~-----ls~eea----~~~Le~~~~GfaFL~a~~~~P 382 (417)
.|+++. .++.+. .+.+...+..+.+++.|-.+.
T Consensus 152 ~~v~v~~~~~~~~p~~~~~~~l~~~~~~~~D~ViIDTpg~~~ 193 (297)
T 1j8m_F 152 IGVPVYGEPGEKDVVGIAKRGVEKFLSEKMEIIIVDTAGRHG 193 (297)
T ss_dssp HTCCEECCTTCCCHHHHHHHHHHHHHHTTCSEEEEECCCSCC
T ss_pred CCeEEEecCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcc
Confidence 676532 345443 333431225788999875443
No 58
>2kvc_A Putative uncharacterized protein; structural genomics, seattle structural genomi for infectious disease, ssgcid, unknown function; NMR {Mycobacterium tuberculosis}
Probab=46.15 E-value=14 Score=31.21 Aligned_cols=68 Identities=7% Similarity=0.056 Sum_probs=52.1
Q ss_pred CCCccCcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 014848 208 NDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDD 283 (417)
Q Consensus 208 ~~~~~m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~ 283 (417)
++-|..++..++.-+. +.||.+|+.++...+.. +|.+++..++++..-+.-.--|++++.-...-+.+
T Consensus 21 ~GVP~~Dy~PLlALL~--r~Ltdeev~~Va~~L~~------~~~i~~~dI~~~I~~vt~~~Ps~eDI~RV~arLaa 88 (103)
T 2kvc_A 21 EGIPPTDSFAVLALLC--RRLSHDEVKAVANELMR------LGDFDQIDIGVVITHFTDELPSPEDVERVRARLAA 88 (103)
T ss_dssp TCCCHHHHHHHHHHHT--TTSCHHHHHHHHHHHHH------HTSSCSSCHHHHHHSCCSSCSCHHHHHHHHHHHGG
T ss_pred CCCCCcchHHHHHHHh--ccCCHHHHHHHHHHHHH------cCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHh
Confidence 3345556666666555 36999999999999983 56799999999999888888899999877666653
No 59
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=46.05 E-value=2.5e+02 Score=28.27 Aligned_cols=156 Identities=15% Similarity=0.086 Sum_probs=85.6
Q ss_pred cHHHHHHHHhcCCCCCH----HHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhc--------CCCHHH-HHHH-HH
Q 014848 214 RLVGALREVLAGGHLGY----EEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMN--------RETDRE-LKAY-CL 279 (417)
Q Consensus 214 ~l~~iIkkl~~G~~LT~----eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~K--------GET~eE-LaGf-a~ 279 (417)
++...++++.....|++ +-.+++...++ ..++.....-.|.-.++.+ +.+..+ +... .+
T Consensus 7 ~~~~~~~~~~~~~~~~e~~~~~~~~e~~~~Ll-------~adv~~~~~~~~~~~vk~~~~~~~~~~~~~~~~~~~~~~~~ 79 (432)
T 2v3c_C 7 NLNKALNKLKAAAFVDKKLIKEVIKDIQRALI-------QADVNVKLVLKMSKEIERRALEEKTPKGLSKKEHIIKIVYE 79 (432)
T ss_dssp HHHHHHHHCCSSSCCCSSTTHHHHHHHHHHHH-------HTCCCHHHHHHHTHHHHHHHSSSCSSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHhccccccccCChHHHHHHHHHH
Confidence 35667778776667886 44456777777 7889888888887777653 234444 3332 22
Q ss_pred HHHhhcCCC----CCC-C-CCCceeeCCCCCCCCCcccchHHH--HHHHhhcCCcEEeecCCCCCCCCCCcHHHHHHhCC
Q 014848 280 AFDDELGPP----PVA-D-VKSLTHYGEPYDGNTRFFRSTLFV--AAVRSCYGESCLLHGAEWMPPKGGVTEEQMLKFMG 351 (417)
Q Consensus 280 Amr~~~~~~----~~~-~-~~~LD~~GtgyDG~~rtfNiSt~a--A~VlAa~Gv~V~kHGnrs~ssKsGvTsaDvLeaLG 351 (417)
.+.+.+... ... . ...+-++|.+|.||+ |++. |..++..|.+|+.-..+...+..--......+..|
T Consensus 80 ~l~~ll~~~~~~~~~~~~~~~vI~ivG~~GvGKT-----Tla~~La~~l~~~G~kVllv~~D~~r~~a~~qL~~~~~~~g 154 (432)
T 2v3c_C 80 ELVKLLGEEAKKLELNPKKQNVILLVGIQGSGKT-----TTAAKLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIH 154 (432)
T ss_dssp HHHHHHCCSCCCCCCCSSSCCCEEEECCSSSSTT-----HHHHHHHHHHHHHHCCEEEECCSCCCTTGGGSSHHHHHHSS
T ss_pred HHHHHhCCCCcCccccCCCCeEEEEECCCCCCHH-----HHHHHHHHHHHHcCCeEEEEeccccCchHHHHHHHhhhccC
Confidence 333333321 111 1 124678999999998 3332 33345568899887765432211000112223345
Q ss_pred CCCCC------CH----HHHHHHHhhcCCcEEEEeCCccCHH
Q 014848 352 ASTNL------SV----LQAKELLEDEEIGFAYVSLREARPS 383 (417)
Q Consensus 352 i~i~l------s~----eea~~~Le~~~~GfaFL~a~~~~Pa 383 (417)
+++.. ++ .++.+.++. ..+.+++.+-+++.
T Consensus 155 v~v~~~~~~~~dp~~i~~~~l~~~~~--~D~vIIDT~G~~~~ 194 (432)
T 2v3c_C 155 VPIYGDETRTKSPVDIVKEGMEKFKK--ADVLIIDTAGRHKE 194 (432)
T ss_dssp CCEECCSSSCCSSSTTHHHHHHTTSS--CSEEEEECCCSCSS
T ss_pred cceEecCCCCCCHHHHHHHHHHHhhC--CCEEEEcCCCCccc
Confidence 53211 11 233333444 67888988876653
No 60
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=36.42 E-value=3.3e+02 Score=27.55 Aligned_cols=167 Identities=13% Similarity=0.155 Sum_probs=90.2
Q ss_pred cHHHHHHHHhcCCCCCHHHHHHHHH----HhcCCccCCCCCCCCHHHHHHHHHHHHhc--------CCCHHH-H-HHHHH
Q 014848 214 RLVGALREVLAGGHLGYEEVQGVLR----DVLPLQVDNKAPGVSESLLSAFLIGQRMN--------RETDRE-L-KAYCL 279 (417)
Q Consensus 214 ~l~~iIkkl~~G~~LT~eEA~~~m~----~IL~~~~~~~~Gevsd~QigAFL~ALR~K--------GET~eE-L-aGfa~ 279 (417)
++...++++.....||++....+++ .++ ..++.....-.|.--++-+ +.++.+ + ....+
T Consensus 5 ~l~~~~~~l~~~~~l~e~~~~~~l~el~~~Ll-------~aDv~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~v~~ 77 (433)
T 3kl4_A 5 NIRDAVRKFLTGSTPYEKAVDEFIKDLQKSLI-------SSDVNVKLVFSLTAKIKERLNKEKPPSVLERKEWFISIVYD 77 (433)
T ss_dssp THHHHHHHHTTTCSCHHHHHHHHHHHHHHHHH-------HTTCCHHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHH-------HcCCChHHHHHHHHHHHHHHhcccccccCChHHHHHHHHHH
Confidence 6778899988888899888755554 445 5677766666666555432 223332 2 22333
Q ss_pred HHHhhcCCC--C---CCCCC-CceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCCcHHHHH----Hh
Q 014848 280 AFDDELGPP--P---VADVK-SLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGVTEEQML----KF 349 (417)
Q Consensus 280 Amr~~~~~~--~---~~~~~-~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGvTsaDvL----ea 349 (417)
.+.+.++.. + ....+ .+-.+|.+|.||+ | +..-+|..++..|.+|+.-+.+-..+ + ..+-| +.
T Consensus 78 eL~~~L~~~~~~~~~~~~~~~vI~lvG~~GsGKT-T--t~~kLA~~l~~~G~kVllv~~D~~r~--~--a~eqL~~~~~~ 150 (433)
T 3kl4_A 78 ELSKLFGGDKEPNVNPTKLPFIIMLVGVQGSGKT-T--TAGKLAYFYKKRGYKVGLVAADVYRP--A--AYDQLLQLGNQ 150 (433)
T ss_dssp HHHHHHCSSSCCCCSCCSSSEEEEECCCTTSCHH-H--HHHHHHHHHHHTTCCEEEEEECCSCH--H--HHHHHHHHHHT
T ss_pred HHHHhcCccccccccccCCCeEEEEECCCCCCHH-H--HHHHHHHHHHHcCCeEEEEecCccch--h--HHHHHHHHHHh
Confidence 444333321 1 11111 3567899999997 1 12223334577899999877664221 1 22322 44
Q ss_pred CCCCCC-----CCHHH----HHHHHhhcCCcEEEEeCCccCH------HhhhhHHHhhhh
Q 014848 350 MGASTN-----LSVLQ----AKELLEDEEIGFAYVSLREARP------SLYSLIGLREHI 394 (417)
Q Consensus 350 LGi~i~-----ls~ee----a~~~Le~~~~GfaFL~a~~~~P------aL~~l~~lRk~L 394 (417)
+|+++. .++.+ +.+.+...+.-+.+++.+-.++ .+..+..+++.+
T Consensus 151 ~gv~~~~~~~~~dp~~i~~~al~~a~~~~~DvvIIDTaGr~~~~~d~~lm~el~~i~~~~ 210 (433)
T 3kl4_A 151 IGVQVYGEPNNQNPIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEMYDVL 210 (433)
T ss_dssp TTCCEECCTTCSCHHHHHHHHHHHTTTTTCSEEEEEECCCSSSCCTTHHHHHHHHHHHHH
T ss_pred cCCceeeccccCCHHHHHHHHHHHHHhcCCCEEEEECCCCccccCCHHHHHHHHHHHHhh
Confidence 566543 23432 2233331125788888887655 444454444443
No 61
>2m0n_A Putative uncharacterized protein; tuberculosis, structural genomics, seattle structural genomi for infectious disease, ssgcid; NMR {Mycobacterium abscessus}
Probab=35.05 E-value=33 Score=29.23 Aligned_cols=74 Identities=14% Similarity=0.095 Sum_probs=52.2
Q ss_pred CCCccCcHHHHHHHHhcCCCCCHHHHHHHHHHhcCCcc-CCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 014848 208 NDPREMRLVGALREVLAGGHLGYEEVQGVLRDVLPLQV-DNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDD 283 (417)
Q Consensus 208 ~~~~~m~l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~-~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~ 283 (417)
+.-|..++..++.-+.+ .||.+|+.++...+..-+. ....+.++...++.+..-+.-.--|++++.-...-+..
T Consensus 23 eGVP~~Dy~PLLALL~R--~LtdeEV~~Va~~L~~~~~~~~~~~~i~~~dI~v~It~VT~e~P~peDI~RV~arLaA 97 (112)
T 2m0n_A 23 EGVPPTDRFPLLALLRR--TLTEEQVQEVVAKLTDPESSAQIDGVVSKDEIEKFIADVTKDEPTAQDISRVASRLAA 97 (112)
T ss_dssp CSCCSCSCCGGGGCCCS--SCCHHHHHHHHHHHTCTTTHHHHTSCCCTTHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCccHHHHHHhhc--cCCHHHHHHHHHHHHhccCcccCCCCCCHHHHHHHHHHHhccCcCHHHHHHHHHHHHh
Confidence 34455555555554433 4999999999999982100 00123588999999999999999999999887766653
No 62
>2qgu_A Probable signal peptide protein; NESG, RSR89, Q8XV73, structural genomics, PSI-2, protein STR initiative; HET: MSE PEF; 1.50A {Ralstonia solanacearum}
Probab=34.76 E-value=78 Score=28.87 Aligned_cols=65 Identities=11% Similarity=0.087 Sum_probs=53.5
Q ss_pred HHHHHHHHhcCC---CCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcC
Q 014848 215 LVGALREVLAGG---HLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELG 286 (417)
Q Consensus 215 l~~iIkkl~~G~---~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~ 286 (417)
..+++..+.+++ .=+.+..+.+++.++ ...++=..++.+.++-.+|.-|+++-..|++++++.+.
T Consensus 39 ~~~vl~~lk~~~~~~~~~~~~~~~~v~~~l-------~p~~D~~~~a~~vLG~~wr~at~~Qr~~F~~~F~~~L~ 106 (211)
T 2qgu_A 39 VDDVLATIKGDPDLRGGNLQKVFQLVDQKI-------VPRADFKRTTQIAMGRFWSQATPEQQQQIQDGFKSLLI 106 (211)
T ss_dssp HHHHHHHHHTCHHHHTTCHHHHHHHHHHHT-------GGGBCHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCccccccCHHHHHHHHHHHh-------hhhcCHHHHHHHHHhHhHhhCCHHHHHHHHHHHHHHHH
Confidence 345555566554 336788899999998 78999999999999999999999999999999997654
No 63
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=30.82 E-value=19 Score=30.32 Aligned_cols=39 Identities=21% Similarity=0.207 Sum_probs=29.2
Q ss_pred cCCCCCHHHHHHHHHHhcCCcc--CCCCCCCCHHHHHHHHHH
Q 014848 224 AGGHLGYEEVQGVLRDVLPLQV--DNKAPGVSESLLSAFLIG 263 (417)
Q Consensus 224 ~G~~LT~eEA~~~m~~IL~~~~--~~~~Gevsd~QigAFL~A 263 (417)
+|.+++++||++.+-.|- ..+ .....++|++|++||=..
T Consensus 58 ~G~~~~~d~ARE~vYGMp-y~eWKa~~Q~eAt~eQ~aafe~~ 98 (104)
T 3fyb_A 58 QGVELDYDGAREYVYGMP-FAEWKTLYQKPASEAQLAAFEAK 98 (104)
T ss_dssp HTCCCCHHHHHHHHHSSC-HHHHHHHHCCCCCHHHHHHHHHC
T ss_pred cCCcCCHHHHHHHHhCCC-HHHHHHHHCCCCCHHHHHHHHHh
Confidence 588999999999987662 222 233679999999998554
No 64
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=30.78 E-value=2.2e+02 Score=27.14 Aligned_cols=151 Identities=13% Similarity=0.056 Sum_probs=84.3
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCC-CC---
Q 014848 215 LVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPP-PV--- 290 (417)
Q Consensus 215 l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~-~~--- 290 (417)
+.+.|+++..|+.++++-.+++-+.++ ..+++..-.-.|+-.++- .+++-...+.+.+.+.+.+. +.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~l~~~L~-------~~dv~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~ 100 (306)
T 1vma_A 30 FFGRVVKLLKGKKLDDETREELEELLI-------QADVGVETTEYILERLEE--KDGDALESLKEIILEILNFDTKLNVP 100 (306)
T ss_dssp THHHHHHHHTTCCCCHHHHHHHHHHHH-------HTTCCHHHHHHHHHHHTT--CCSCHHHHHHHHHHHHTCSCCCCCCC
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHH-------HCCCCHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHhCCCCCCccc
Confidence 445566777666899877788888888 889998888888776654 33332233444455444332 11
Q ss_pred CCCC-CceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCCCCCC--cHHHHHHhCCCCCC-----CCHHHH-
Q 014848 291 ADVK-SLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPPKGGV--TEEQMLKFMGASTN-----LSVLQA- 361 (417)
Q Consensus 291 ~~~~-~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ssKsGv--TsaDvLeaLGi~i~-----ls~eea- 361 (417)
...+ .+-++|.+|.||+ |. .-..|-.++..|-+|..-+.+-..+ +. .....++.+|+++- .++..+
T Consensus 101 ~~~~~vi~ivG~~GsGKT-Tl--~~~LA~~l~~~g~kV~lv~~D~~r~--~a~eqL~~~~~~~gl~~~~~~s~~~~~~v~ 175 (306)
T 1vma_A 101 PEPPFVIMVVGVNGTGKT-TS--CGKLAKMFVDEGKSVVLAAADTFRA--AAIEQLKIWGERVGATVISHSEGADPAAVA 175 (306)
T ss_dssp SSSCEEEEEECCTTSSHH-HH--HHHHHHHHHHTTCCEEEEEECTTCH--HHHHHHHHHHHHHTCEEECCSTTCCHHHHH
T ss_pred CCCCeEEEEEcCCCChHH-HH--HHHHHHHHHhcCCEEEEEccccccH--HHHHHHHHHHHHcCCcEEecCCccCHHHHH
Confidence 0111 3568899999986 11 1112233455688998887654211 10 01234556676531 133322
Q ss_pred ----HHHHhhcCCcEEEEeCCcc
Q 014848 362 ----KELLEDEEIGFAYVSLREA 380 (417)
Q Consensus 362 ----~~~Le~~~~GfaFL~a~~~ 380 (417)
.+.+.. +..+.+++.|-.
T Consensus 176 ~~al~~a~~~-~~dvvIiDtpg~ 197 (306)
T 1vma_A 176 FDAVAHALAR-NKDVVIIDTAGR 197 (306)
T ss_dssp HHHHHHHHHT-TCSEEEEEECCC
T ss_pred HHHHHHHHhc-CCCEEEEECCCc
Confidence 222322 256788887753
No 65
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=30.49 E-value=1.5e+02 Score=28.39 Aligned_cols=110 Identities=12% Similarity=0.066 Sum_probs=66.8
Q ss_pred HHHHHHHHhcC-CCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHh--cCCCH-HHHH-HHHHHHHhhcCCC-
Q 014848 215 LVGALREVLAG-GHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRM--NRETD-RELK-AYCLAFDDELGPP- 288 (417)
Q Consensus 215 l~~iIkkl~~G-~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~--KGET~-eELa-Gfa~Amr~~~~~~- 288 (417)
+.+.|+++..+ ..++.+-.+++-+.++ ..++...-.-.|+-.++- +++.. +.+. .+.+.+.+.+.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~-------~~dv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 90 (320)
T 1zu4_A 18 FSKDIKKLSKKYKQADDEFFEELEDVLI-------QTDMGMKMVLKVSNLVRKKTKRDTSFENIKDALVESLYQAYTDND 90 (320)
T ss_dssp HHHHHHHHHHTCCCCSHHHHHHHHHHHH-------HTTCCHHHHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhCccc
Confidence 55667777776 6899877788888888 889998888888887765 33322 2211 2222332222111
Q ss_pred --------CC--CCCCCceeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCC
Q 014848 289 --------PV--ADVKSLTHYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEW 334 (417)
Q Consensus 289 --------~~--~~~~~LD~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs 334 (417)
.. .....+-++|.+|.||+ |. ...+|..++..|-+|+.-+.+-
T Consensus 91 ~~~~~~~l~~~~~~~~vI~ivG~~G~GKT-T~--~~~LA~~l~~~g~kVllid~D~ 143 (320)
T 1zu4_A 91 WTNKKYRIDFKENRLNIFMLVGVNGTGKT-TS--LAKMANYYAELGYKVLIAAADT 143 (320)
T ss_dssp C----CCCCCCTTSCEEEEEESSTTSSHH-HH--HHHHHHHHHHTTCCEEEEECCC
T ss_pred ccccccCccccCCCCeEEEEECCCCCCHH-HH--HHHHHHHHHHCCCeEEEEeCCC
Confidence 11 11113567899999986 21 2223334567799999988764
No 66
>4ex8_A ALNA; alpha/beta/alpha-domain, C-glycosynthase, divalent metal ION ligase; 2.10A {Streptomyces SP} PDB: 4ex9_A*
Probab=28.51 E-value=13 Score=36.99 Aligned_cols=149 Identities=13% Similarity=0.096 Sum_probs=91.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCCCCCCCCc-eeeCCCCCCCCCcccchHHHHHHHhhcCCcEE
Q 014848 250 PGVSESLLSAFLIGQRMNRETDRELKAYCLAFDDELGPPPVADVKSL-THYGEPYDGNTRFFRSTLFVAAVRSCYGESCL 328 (417)
Q Consensus 250 Gevsd~QigAFL~ALR~KGET~eELaGfa~Amr~~~~~~~~~~~~~L-D~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~ 328 (417)
..+-|+-++ ++=+--.=|.+.+||..++++ +.. ......|+ ..++.|.+|.. | -...++++..+|++|.
T Consensus 62 ~GavPATIa-i~~G~~~VGL~~~eLe~la~~--~~~---~K~SrRDl~~~~a~g~~GaT-T---VaaTm~lA~~AGI~VF 131 (316)
T 4ex8_A 62 AGAVPATIG-IAGGKLVVGLTDSLIERFAST--KGI---PKISARDIGGALAGGGLGAT-T---VAGTIVIAERAGIQVF 131 (316)
T ss_dssp TTCEEEEEE-EETTEEEESCCHHHHHHHHHC--TTC---CEECGGGHHHHHHHCSCBEE-C---HHHHHHHHHHHTCCEE
T ss_pred cCCCcceEE-EECCEEEEcCCHHHHHHHhcC--CCc---cccchhhHHHHHhCCCCccc-c---HHHHHHHHHHCCCcEE
Confidence 344444443 333333458899999988761 111 11123354 34567778877 2 3334456678899999
Q ss_pred eecCCCCCCCCCCc----HHHHHHh---------CCCCCCCCHHHHHHHHhhcCCcEEEE-eCCccCHHh----------
Q 014848 329 LHGAEWMPPKGGVT----EEQMLKF---------MGASTNLSVLQAKELLEDEEIGFAYV-SLREARPSL---------- 384 (417)
Q Consensus 329 kHGnrs~ssKsGvT----saDvLea---------LGi~i~ls~eea~~~Le~~~~GfaFL-~a~~~~PaL---------- 384 (417)
-=|+-+-=++++.. |+|+-|- -|++.-++.....+.||. .|+..+ |.....|++
T Consensus 132 aTGGiGGVHRgae~t~DISaDL~eLarTpV~VVcaG~KsILDi~~TLE~LET--~GV~Vvgy~td~fPaFy~r~Sg~~~p 209 (316)
T 4ex8_A 132 TTAGIGGVHRRGEDTLDISPDLLQFRKTKMTVVSGGAKSILDHRLTAEYLET--AGVPVYGYRTDKLAAFVVREADVPVT 209 (316)
T ss_dssp ECSCBCCBBTTHHHHCCBCTHHHHTTTCCEEEEESBBCTTBCHHHHHHHHHH--TTCCEEEETCSBCCBTTBSCCSCBCE
T ss_pred EeCCccccCCCCCCCcchhhhHHHhcCCCeEEEecccchhhcchHHHHHHHh--CCceEEEecCCCCceeeeCCCCCcCC
Confidence 98875522222111 4666663 388888999999999999 787766 445566754
Q ss_pred --------hhhHHHhhhhCCCChhhhhhhccCCCCCCc
Q 014848 385 --------YSLIGLREHIKKRPPVATSEKVQQFVRVSH 414 (417)
Q Consensus 385 --------~~l~~lRk~LG~RTifNtlgpLlNPa~a~~ 414 (417)
..++..++.||+.+-+ -+.||....+
T Consensus 210 r~d~~~e~A~~~~a~~~lgl~~g~----lvanPiP~e~ 243 (316)
T 4ex8_A 210 RMDDLHTAARAAEAHWQVNGPGTV----LLTSPIDEQD 243 (316)
T ss_dssp EESSHHHHHHHHHHHHHHHCSCEE----EEECCCCGGG
T ss_pred CCCCHHHHHHHHHHHHHhCCCCeE----EEEcCCChhh
Confidence 4567778888877632 2456665544
No 67
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=27.49 E-value=21 Score=30.05 Aligned_cols=38 Identities=18% Similarity=0.230 Sum_probs=17.1
Q ss_pred cCCCCCHHHHHHHHHHhcCCcc--CCCCCCCCHHHHHHHHH
Q 014848 224 AGGHLGYEEVQGVLRDVLPLQV--DNKAPGVSESLLSAFLI 262 (417)
Q Consensus 224 ~G~~LT~eEA~~~m~~IL~~~~--~~~~Gevsd~QigAFL~ 262 (417)
+|.+++++||++.+-.| |..+ .....++|++|++||-.
T Consensus 59 ~G~~~~~d~ARE~vYGM-py~eWKa~~Q~eAt~eQ~aaf~~ 98 (105)
T 2o35_A 59 SGVPMSKEESREIVYGM-PYEEWRTQNQGEASPEQKAAFER 98 (105)
T ss_dssp TTCCCCHHHHHHHHHSS-CHHHHTC----------------
T ss_pred cCCcCCHHHHHHHHhCC-CHHHHHHHHCCCCCHHHHHHHHH
Confidence 68899999999998776 3444 44467999999999943
No 68
>1l6x_B Minimized B-domain of protein A Z34C; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: k.13.1.1 PDB: 1oqo_C* 1oqx_C* 1zdc_A 1zdd_A
Probab=25.51 E-value=1.5e+02 Score=20.31 Aligned_cols=32 Identities=9% Similarity=0.032 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhh
Q 014848 253 SESLLSAFLIGQRMNRETDRELKAYCLAFDDE 284 (417)
Q Consensus 253 sd~QigAFL~ALR~KGET~eELaGfa~Amr~~ 284 (417)
+..|.-||--.|.+.+.|.|+=-+|.+.+++.
T Consensus 2 ~~~qQnaFYevLh~~nLtEeQrn~yI~slkdd 33 (34)
T 1l6x_B 2 NMQCQRRFYEALHDPNLNEEQRNAKIKSIRDD 33 (34)
T ss_dssp CHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHcCCCCCHHHHHhHHHHHhcc
Confidence 56788999999999999999999999988764
No 69
>1vkm_A Conserved hypothetical protein TM1464; indigoidine synthase A-like fold, structural genomics, joint for structural genomics, JCSG; HET: MSE UNL; 1.90A {Thermotoga maritima} SCOP: c.138.1.1
Probab=23.83 E-value=57 Score=32.07 Aligned_cols=130 Identities=14% Similarity=0.134 Sum_probs=80.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCCCCc-eeeCCCCCCCCCcccchHHHHHHHhhcCCcEEeecCCCCCC--CCCCcHH
Q 014848 268 RETDRELKAYCLAFDDELGPPPVADVKSL-THYGEPYDGNTRFFRSTLFVAAVRSCYGESCLLHGAEWMPP--KGGVTEE 344 (417)
Q Consensus 268 GET~eELaGfa~Amr~~~~~~~~~~~~~L-D~~GtgyDG~~rtfNiSt~aA~VlAa~Gv~V~kHGnrs~ss--KsGvTsa 344 (417)
|.+.+||..++ .+...+. ...++ ..++.+.+|.. .-...++++..+|++|.-=|+-+-=+ ..-+ |+
T Consensus 73 GL~~~eLe~la---~~~~~K~---SrRDl~~~~a~g~~GaT----TVaaTm~lA~~AGI~VFaTGGiGGVHRgt~DI-Sa 141 (297)
T 1vkm_A 73 GMSEEELEAMM---REGADKV---GTREIPIVVAEGKNAAT----TVSATIFLSRRIGIEVVVTGGTGGVHPGRVDV-SQ 141 (297)
T ss_dssp SCCHHHHHHHH---HHCCEEE---CGGGHHHHHHHTCCEEE----CHHHHHHHHHHHTCCEEECSCBCCBCTTSSCB-CH
T ss_pred CCCHHHHHHHh---cCCCccc---cHhhHHHHHhCCCCchh----hHHHHHHHHHHcCCcEEEecccccccCCCccc-ch
Confidence 77999999887 2222221 22344 34466777776 12334456677899999887643111 1223 57
Q ss_pred HHHHh---------CCCCCCCCHHHHHHHHhhcCCcEEEEe-CCccCHHh------------------hhhHHHhhhhCC
Q 014848 345 QMLKF---------MGASTNLSVLQAKELLEDEEIGFAYVS-LREARPSL------------------YSLIGLREHIKK 396 (417)
Q Consensus 345 DvLea---------LGi~i~ls~eea~~~Le~~~~GfaFL~-a~~~~PaL------------------~~l~~lRk~LG~ 396 (417)
|+-|- -|++.-++.....+.||. .|+..+. .....|++ ..++..++.||+
T Consensus 142 DL~eL~rTpV~VVcaG~KsILDi~~TLE~LET--~GV~Vvgy~t~~fPaF~tr~Sg~~~p~~d~~~e~A~~~~~~~~lgl 219 (297)
T 1vkm_A 142 DLTEMSSSRAVLVSSGIKSILDVEATFEMLET--LEIPLVGFRTNEFPLFFSRKSGRRVPRIENVEEVLKIYESMKEMEL 219 (297)
T ss_dssp HHHHHTTCCEEEEESBBCTTSCHHHHHHHHHH--TTCCEEEESCSBCCBTTBSCCSCBCCEECSHHHHHHHHHHHHHTTC
T ss_pred hHHHhcCCCeEEEecccchhhcchhHHHHHHh--CCceEEEecCCCCCceecCCCCCcCCCCCCHHHHHHHHHHHHHhCC
Confidence 88774 578888999999999999 7876553 34455543 456667777776
Q ss_pred CChhhhhhhccCCCCCCc
Q 014848 397 RPPVATSEKVQQFVRVSH 414 (417)
Q Consensus 397 RTifNtlgpLlNPa~a~~ 414 (417)
..-+ -+.||...++
T Consensus 220 ~~g~----lvanPiP~e~ 233 (297)
T 1vkm_A 220 EKTL----MVLNPVPEEY 233 (297)
T ss_dssp CSEE----EEECCCCGGG
T ss_pred CCeE----EEEcCCChhh
Confidence 6532 2346655443
No 70
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=23.16 E-value=1.9e+02 Score=21.75 Aligned_cols=48 Identities=10% Similarity=0.100 Sum_probs=31.4
Q ss_pred CCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 014848 225 GGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAF 281 (417)
Q Consensus 225 G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Am 281 (417)
|..+|.+|++.+++.+= . +|.++-.+ |+..+..+..+.+++..+-+.+
T Consensus 3 ~~~~s~~ei~~~~~~~d-----~-~g~i~~~e---F~~~~~~~~~~~~~l~~~F~~~ 50 (109)
T 5pal_A 3 TKVLKADDINKAISAFK-----D-PGTFDYKR---FFHLVGLKGKTDAQVKEVFEIL 50 (109)
T ss_dssp GGTSCHHHHHHHHHHTC-----S-TTCCCHHH---HHHHHTCTTCCHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHhC-----C-CCcCcHHH---HHHHHhhccCcHHHHHHHHHHH
Confidence 34688889988888873 2 67777655 5555555666777665544333
No 71
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=23.12 E-value=2.2e+02 Score=20.70 Aligned_cols=48 Identities=17% Similarity=0.184 Sum_probs=32.6
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcC
Q 014848 215 LVGALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNR 268 (417)
Q Consensus 215 l~~iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KG 268 (417)
+..+++.+ |..++.+|+..++..+= .+.+|.++-.+.-.++...+-..
T Consensus 31 l~~~l~~~--g~~~~~~~~~~l~~~~d----~~~dg~i~~~eF~~~~~~~~~~~ 78 (92)
T 2kn2_A 31 LRHVMINL--GEKLTDEEVEQMIKEAD----LDGDGQVNYEEFVKMMMTVRGGG 78 (92)
T ss_dssp HHHHHHHT--TCCCCHHHHHHHHHHHC----SSCCSSEEHHHHHHHHHHHTTTC
T ss_pred HHHHHHHh--CCCCCHHHHHHHHHHhC----CCCCCcEeHHHHHHHHHhccCCC
Confidence 44555544 66789999999988874 23467888877777766555443
No 72
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=22.24 E-value=1.1e+02 Score=25.20 Aligned_cols=59 Identities=14% Similarity=0.070 Sum_probs=35.1
Q ss_pred HHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 014848 220 REVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAF 281 (417)
Q Consensus 220 kkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Am 281 (417)
+++.+...+|.+|.+.+++.+-. ...+|.++-.++..+|..+.....+.+++..+.+.+
T Consensus 7 ~~l~~~~~~s~~~i~~l~~~fd~---~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~ 65 (183)
T 1s6c_A 7 EQLEAQTNFTKRELQVLYRGFKN---EXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAF 65 (183)
T ss_dssp HHHHHHSSCCHHHHHHHHHHHHH---HCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHH---hCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHh
Confidence 33444456777777776665531 023677777777777766655556666665554443
No 73
>1ejd_A MURA, EPT, UDP-N-acetylglucosamine enolpyruvyltransferase; inside-OUT alpha/beta barrel; 1.55A {Enterobacter cloacae} SCOP: d.68.2.2 PDB: 1ejc_A 1eyn_A* 1ybg_A* 3kqa_A* 3lth_A* 3spb_A 3swq_A* 3upk_A* 1naw_A 1dlg_A 1ryw_A* 1q3g_A* 3su9_A* 3swi_A* 3v4t_A* 3v5v_A* 3swa_A* 1uae_A* 3kqj_A* 3kr6_A* ...
Probab=22.14 E-value=57 Score=32.45 Aligned_cols=97 Identities=9% Similarity=0.029 Sum_probs=55.7
Q ss_pred HHHHHHHHHhcCCC-------HHHHHHHHHHHHhhcCCCCCCCCCCceeeCCCCCCCC------Ccccch-HHHHHHHhh
Q 014848 257 LSAFLIGQRMNRET-------DRELKAYCLAFDDELGPPPVADVKSLTHYGEPYDGNT------RFFRST-LFVAAVRSC 322 (417)
Q Consensus 257 igAFL~ALR~KGET-------~eELaGfa~Amr~~~~~~~~~~~~~LD~~GtgyDG~~------rtfNiS-t~aA~VlAa 322 (417)
..+++.+.-.+|+| .+++....++|++.-..+...+ .+.+.|.++.+.. .....| .+++.+++.
T Consensus 26 ~r~Llaa~la~g~t~i~n~~~~~dv~~t~~~L~~lGa~i~~~~--~~~I~~~~~~~~~~~~d~~~~~ras~~l~~alla~ 103 (419)
T 1ejd_A 26 LPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQLGTKVERXG--SVWIDASNVNNFSAPYDLVKTMRASIWALGPLVAR 103 (419)
T ss_dssp HHHHHHGGGBSSCEEEESCCCCHHHHHHHHHHHHTTCEEEESS--SEEEECTTCCCCEECHHHHTTCGGGGGGHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEecCCCcHHHHHHHHHHHHCCCEEEEcc--eEEEecCCCCCCcCchHHhhhhhHHHHHHHHHhhc
Confidence 45566666777753 4788888888885432221111 2334344432111 011122 245555565
Q ss_pred cC-CcEEeecCCCCCCCCCCcHHHHHHhCCCCCC
Q 014848 323 YG-ESCLLHGAEWMPPKGGVTEEQMLKFMGASTN 355 (417)
Q Consensus 323 ~G-v~V~kHGnrs~ssKsGvTsaDvLeaLGi~i~ 355 (417)
.| +.|...|+..++..--...-|.|+.||+++.
T Consensus 104 ~~~~~v~l~G~~~l~~rp~~~~~~~L~~mGa~i~ 137 (419)
T 1ejd_A 104 FGQGQVSLPGGCAIGARPVDLHIFGLEKLGAEIK 137 (419)
T ss_dssp HSEEEEECCCCSCCSSCTTHHHHHHHHHTTCEEE
T ss_pred CCceEEEecCCcccCCCchHHHHHHHHHCCCEEE
Confidence 56 6888899888776433236799999998875
No 74
>2h2m_A Protein MURR1, COMM domain-containing protein 1; all alpha-helical, metal transport; NMR {Homo sapiens}
Probab=21.48 E-value=27 Score=29.66 Aligned_cols=51 Identities=24% Similarity=0.419 Sum_probs=38.2
Q ss_pred HHHHHHHhhccCCccc--cccHHHHhHHHHhhhhccccCCCCCcCCHHHHHHHHhhhhh
Q 014848 119 LDTILRSAKGDLKDEE--EVSKAQLGAFFSAMTIRANAFPEATQWSEGERRAMNTFWPL 175 (417)
Q Consensus 119 ~~~~l~~~~~~l~~~~--~~~~~q~gaffga~~~r~~~~p~~~~~s~~e~~~~~~~~~~ 175 (417)
++.++.-|++=|++.- -+...|+.+|.-|+|-|-+- -|+++...++.||+.
T Consensus 48 f~~~~~K~~~lik~i~~admd~nqleafLt~qtkkq~g------ls~eQa~~~~KFWK~ 100 (108)
T 2h2m_A 48 FRPFLAKMRGILKSIASADMDFNQLEAFLTAQTKKQGG------ITSDQAAVISKFWKS 100 (108)
T ss_dssp HHHHHTTTSTTHHHHTTTCCCTTTSTTTHHHHTTSSSC------CCHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHh
Confidence 4444445555555433 67789999999999998843 489999999999983
No 75
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=21.39 E-value=73 Score=26.48 Aligned_cols=61 Identities=11% Similarity=0.085 Sum_probs=41.1
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 014848 218 ALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCLAF 281 (417)
Q Consensus 218 iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~Am 281 (417)
.++.+.....++.+|.+.+++.+- .+..+|.++..++..+|..+.....+.+++..+.+.+
T Consensus 12 ~l~~l~~~~~~~~~~i~~~f~~fd---~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~ 72 (193)
T 1bjf_A 12 VMQDLLESTDFTEHEIQEWYKGFL---RDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTF 72 (193)
T ss_dssp HHHHHHHHSSCCHHHHHHHHHHHH---HHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHH---HHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHh
Confidence 455666667899999999888774 1124788999988888776654444555555544443
No 76
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=21.21 E-value=1.5e+02 Score=24.34 Aligned_cols=59 Identities=8% Similarity=-0.040 Sum_probs=40.2
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHhcCCccCCCCCCCCHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 014848 218 ALREVLAGGHLGYEEVQGVLRDVLPLQVDNKAPGVSESLLSAFLIGQRMNRETDRELKAYCL 279 (417)
Q Consensus 218 iIkkl~~G~~LT~eEA~~~m~~IL~~~~~~~~Gevsd~QigAFL~ALR~KGET~eELaGfa~ 279 (417)
.++.+...-.++.+|.+.+++.+-. +..+|.++..++..+|..+.-.+.+.+++..+.+
T Consensus 12 ~l~~l~~~~~~~~~~i~~~f~~fd~---~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~ 70 (190)
T 1g8i_A 12 VVEELTRKTYFTEKEVQQWYKGFIK---DCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFN 70 (190)
T ss_dssp HHHHHHHTSSSCHHHHHHHHHHHHH---HCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHH---hCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHH
Confidence 5666777778899998888887741 1247889988888888777444555555444433
Done!