BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014849
(417 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 165/270 (61%), Gaps = 7/270 (2%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
G Y++ K +G G+F KV + TGQ VA+K ++K+ + + + ++REIS + LR
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHS 133
HP+I+KLY+V+ +K +I V+E+A G ELF I + + SEQ +RR+FQQ+ISAVEYCH
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKK 192
+ HRD I+DFGLS I DG L T CG+P Y APE+++ K
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLS----NIMTDGNFLKTSCGSPNYAAPEVISGK 181
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
Y G +VD+WSCGV+L+V+ LPF+D ++ +++ I G Y PK+ SP I R+
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM 241
Query: 253 LDTDPATRITVDEILRDPWFKKDYKERKFP 282
L +P RI++ EI++D WFK D E P
Sbjct: 242 LIVNPLNRISIHEIMQDDWFKVDLPEYLLP 271
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 221 bits (563), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 165/270 (61%), Gaps = 7/270 (2%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
G Y++ K +G G+F KV + TGQ VA+K ++K+ + + + ++REIS + LR
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHS 133
HP+I+KLY+V+ +K +I V+E+A G ELF I + + SEQ +RR+FQQ+ISAVEYCH
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKK 192
+ HRD I+DFGLS I DG L T CG+P Y APE+++ K
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLS----NIMTDGNFLKTSCGSPNYAAPEVISGK 177
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
Y G +VD+WSCGV+L+V+ LPF+D ++ +++ I G Y PK+ SP I R+
Sbjct: 178 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM 237
Query: 253 LDTDPATRITVDEILRDPWFKKDYKERKFP 282
L +P RI++ EI++D WFK D E P
Sbjct: 238 LIVNPLNRISIHEIMQDDWFKVDLPEYLLP 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/266 (42%), Positives = 164/266 (61%), Gaps = 7/266 (2%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
G Y++ K +G G+F KV + TGQ VA+K ++K+ + + + ++REIS + LR
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHS 133
HP+I+KLY+V+ +K +I V+E+A G ELF I + + SEQ +RR+FQQ+ISAVEYCH
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 131
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKK 192
+ HRD I+DFGLS I DG L T CG+P Y APE+++ K
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLS----NIMTDGNFLKTSCGSPNYAAPEVISGK 187
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
Y G +VD+WSCGV+L+V+ LPF+D ++ +++ I G Y PK+ SP I R+
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM 247
Query: 253 LDTDPATRITVDEILRDPWFKKDYKE 278
L +P RI++ EI++D WFK D E
Sbjct: 248 LIVNPLNRISIHEIMQDDWFKVDLPE 273
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/266 (42%), Positives = 164/266 (61%), Gaps = 7/266 (2%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
G Y++ K +G G+F KV + TGQ VA+K ++K+ + + + ++REIS + LR
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHS 133
HP+I+KLY+V+ +K +I V+E+A G ELF I + + SEQ +RR+FQQ+ISAVEYCH
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 130
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKK 192
+ HRD I+DFGLS I DG L T CG+P Y APE+++ K
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLS----NIMTDGNFLKTSCGSPNYAAPEVISGK 186
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
Y G +VD+WSCGV+L+V+ LPF+D ++ +++ I G Y PK+ SP I R+
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM 246
Query: 253 LDTDPATRITVDEILRDPWFKKDYKE 278
L +P RI++ EI++D WFK D E
Sbjct: 247 LIVNPLNRISIHEIMQDDWFKVDLPE 272
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 157/264 (59%), Gaps = 4/264 (1%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL 73
L YE+ + IG G FAKV ++ TG+ VAIK + K + G +K EI + L
Sbjct: 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNL 65
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCH 132
RH +I +LY VL T KI+ V+E+ GGELF I S+ R SE+ +R F+Q++SAV Y H
Sbjct: 66 RHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKK 192
S+G HRD + DFGL A K + D L T CG+ AY APE++ K
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
Y G++ D+WS G++L+VL G+LPF+D N+MA+Y+KI +G+Y PKW SP + ++
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQM 244
Query: 253 LDTDPATRITVDEILRDPWFKKDY 276
L DP RI++ +L PW +DY
Sbjct: 245 LQVDPKKRISMKNLLNHPWIMQDY 268
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 160/273 (58%), Gaps = 7/273 (2%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
G Y + + +G G+F KV + +T Q VA+K +S+Q + + + V+REIS + LR
Sbjct: 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHS 133
HP+I+KLY+V+ T I V+E+A GGELF I K R +E RR+FQQ+I A+EYCH
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR 126
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKK 192
+ HRD I+DFGLS I DG L T CG+P Y APE++ K
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLS----NIMTDGNFLKTSCGSPNYAAPEVINGK 182
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
Y G +VD+WSCG+VL+V+ G LPF+D + +++K+ Y P + SP + I R+
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRM 242
Query: 253 LDTDPATRITVDEILRDPWFKKDYKERKFPHED 285
+ DP RIT+ EI RDPWF + + P E+
Sbjct: 243 IVADPMQRITIQEIRRDPWFNVNLPDYLRPMEE 275
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 159/272 (58%), Gaps = 6/272 (2%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
G Y +G +G G F KV G++ TG VA+K +++QKI + ++REI + R
Sbjct: 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHS 133
HP+I+KLY+V++T + I+ VME+ GGELF I K GR E+ SRR FQQ++S V+YCH
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKK 192
V HRD I+DFGLS + DG L CG+P Y APE+++ +
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRXSCGSPNYAAPEVISGR 190
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
Y G +VD+WS GV+L+ L G LPF+D ++ +++KI G + P++ +P + + +
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHM 250
Query: 253 LDTDPATRITVDEILRDPWFKKDYKERKFPHE 284
L DP R T+ +I WFK+D + FP +
Sbjct: 251 LQVDPMKRATIKDIREHEWFKQDLPKYLFPED 282
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 107/270 (39%), Positives = 155/270 (57%), Gaps = 6/270 (2%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
G Y +G +G G F KV G + TG VA+K +++QKI + +KREI + R
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHS 133
HP+I+KLY+V++T + VME+ GGELF I K GR E +RR FQQ++SAV+YCH
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKK 192
V HRD I+DFGLS + DG L T CG+P Y APE+++ +
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGR 185
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
Y G +VD+WSCGV+L+ L G LPF+D ++ +++KI G + P++ + + + +
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHM 245
Query: 253 LDTDPATRITVDEILRDPWFKKDYKERKFP 282
L DP R T+ +I WFK+D FP
Sbjct: 246 LQVDPLKRATIKDIREHEWFKQDLPSYLFP 275
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 165/287 (57%), Gaps = 8/287 (2%)
Query: 9 SREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREIS 68
S E G Y + K IG G FAKV R++ TG+ VAIK + K ++ L + RE+
Sbjct: 5 SDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK-LFREVR 63
Query: 69 IMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQQLISA 127
IM L HPNIVKL+EV+ T+ +Y +ME+A GGE+F ++ GR E+ +R F+Q++SA
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA 123
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
V+YCH + + HRD I+DFG S + G L T CG+P Y APE
Sbjct: 124 VQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDTFCGSPPYAAPE 180
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKW 247
+ K YDG +VD+WS GV+L+ L +G LPF+ NL + ++ +G+YR P + S D +
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 240
Query: 248 FIGRLLDTDPATRITVDEILRDPWFKKDYKE---RKFPHEDFDLKDS 291
+ R L +P R T+++I++D W ++E + F + D+ D
Sbjct: 241 LLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQ 287
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 154/270 (57%), Gaps = 6/270 (2%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
G Y +G +G G F KV G + TG VA+K +++QKI + +KREI + R
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHS 133
HP+I+KLY+V++T + VME+ GGELF I K GR E +RR FQQ++SAV+YCH
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKK 192
V HRD I+DFGLS + DG L CG+P Y APE+++ +
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRDSCGSPNYAAPEVISGR 185
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
Y G +VD+WSCGV+L+ L G LPF+D ++ +++KI G + P++ + + + +
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHM 245
Query: 253 LDTDPATRITVDEILRDPWFKKDYKERKFP 282
L DP R T+ +I WFK+D FP
Sbjct: 246 LQVDPLKRATIKDIREHEWFKQDLPSYLFP 275
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 166/294 (56%), Gaps = 8/294 (2%)
Query: 2 GDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTA 61
G++ + E G Y + K IG G FAKV R++ TG+ VAIK + K ++ L
Sbjct: 1 GNSIASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK 60
Query: 62 HVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRY 120
+ RE+ IM L HPNIVKL+EV+ T+ +Y +ME+A GGE+F ++ GR E+ +R
Sbjct: 61 -LFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSK 119
Query: 121 FQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGT 180
F+Q++SAV+YCH + + HRD I+DFG S + G L CG
Sbjct: 120 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDAFCGA 176
Query: 181 PAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKW 240
P Y APE+ K YDG +VD+WS GV+L+ L +G LPF+ NL + ++ +G+YR P +
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 236
Query: 241 TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKE---RKFPHEDFDLKDS 291
S D + + R L +P R T+++I++D W ++E + F + D+ D
Sbjct: 237 MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQ 290
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 165/291 (56%), Gaps = 12/291 (4%)
Query: 4 NTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV 63
N+ + E G Y + K IG G FAKV R++ TG+ VA+K + K ++ L +
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-L 60
Query: 64 KREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQ 122
RE+ IM L HPNIVKL+EV+ T+ +Y VME+A GGE+F ++ GR E+ +R F+
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 120
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
Q++SAV+YCH + + HRD I+DFG S + L T CG+P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPP 177
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTS 242
Y APE+ K YDG +VD+WS GV+L+ L +G LPF+ NL + ++ +G+YR P + S
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
Query: 243 PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSVG 293
D + + + L +P+ R T+++I++D W HED +LK V
Sbjct: 238 TDCENLLKKFLILNPSKRGTLEQIMKDRWM-------NVGHEDDELKPYVA 281
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 165/290 (56%), Gaps = 12/290 (4%)
Query: 4 NTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV 63
N+ + E G Y + K IG G FAKV R++ TG+ VA+K + K ++ L +
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-L 60
Query: 64 KREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQ 122
RE+ IM L HPNIVKL+EV+ T+ +Y VME+A GGE+F ++ GR E+ +R F+
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 120
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
Q++SAV+YCH + + HRD I+DFG S + L T CG+P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPP 177
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTS 242
Y APE+ K YDG +VD+WS GV+L+ L +G LPF+ NL + ++ +G+YR P + S
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
Query: 243 PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSV 292
D + + + L +P+ R T+++I++D W HED +LK V
Sbjct: 238 TDCENLLKKFLILNPSKRGTLEQIMKDRWM-------NVGHEDDELKPYV 280
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 165/290 (56%), Gaps = 12/290 (4%)
Query: 4 NTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV 63
N+ + E G Y + K IG G FAKV R++ TG+ VA++ + K ++ L +
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK-L 60
Query: 64 KREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQ 122
RE+ IM L HPNIVKL+EV+ T+ +Y VME+A GGE+F ++ GR E+ +R F+
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 120
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
Q++SAV+YCH + + HRD I+DFG S + L T CG+P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPP 177
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTS 242
Y APE+ K YDG +VD+WS GV+L+ L +G LPF+ NL + ++ +G+YR P + S
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
Query: 243 PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSV 292
D + + + L +P+ R T+++I++D W HED +LK V
Sbjct: 238 TDCENLLKKFLILNPSKRGTLEQIMKDRWM-------NVGHEDDELKPYV 280
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 163/290 (56%), Gaps = 12/290 (4%)
Query: 4 NTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV 63
N+ + E G Y + K IG G FAKV R++ TG+ VA+K + K ++ L +
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-L 60
Query: 64 KREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQ 122
RE+ IM L HPNIVKL+EV+ T+ +Y VME+A GGE+F ++ GR E+ +R F+
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 120
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
Q++SAV+YCH + + HRD I+DFG S + L CG P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDAFCGAPP 177
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTS 242
Y APE+ K YDG +VD+WS GV+L+ L +G LPF+ NL + ++ +G+YR P + S
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
Query: 243 PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSV 292
D + + + L +P+ R T+++I++D W HED +LK V
Sbjct: 238 TDCENLLKKFLILNPSKRGTLEQIMKDRWM-------NVGHEDDELKPYV 280
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 164/290 (56%), Gaps = 12/290 (4%)
Query: 4 NTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV 63
N+ + E G Y + K IG G FAKV R++ TG+ VA++ + K ++ L +
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK-L 60
Query: 64 KREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQ 122
RE+ IM L HPNIVKL+EV+ T+ +Y VME+A GGE+F ++ GR E+ +R F+
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 120
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
Q++SAV+YCH + + HRD I+DFG S + L CG+P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDEFCGSPP 177
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTS 242
Y APE+ K YDG +VD+WS GV+L+ L +G LPF+ NL + ++ +G+YR P + S
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
Query: 243 PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSV 292
D + + + L +P+ R T+++I++D W HED +LK V
Sbjct: 238 TDCENLLKKFLILNPSKRGTLEQIMKDRWM-------NVGHEDDELKPYV 280
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 160/278 (57%), Gaps = 12/278 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G Y + K IG G FAKV R++ TG+ VA+K + K ++ L + RE+ IM L H
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNH 65
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELF-AKISKGRFSEQLSRRYFQQLISAVEYCHSR 134
PNIVKL+EV+ T+ +Y VME+A GGE+F ++ G E+ +R F+Q++SAV+YCH +
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
+ HRD I+DFG S + L T CG+P Y APE+ K Y
Sbjct: 126 FIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKKY 182
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLD 254
DG +VD+WS GV+L+ L +G LPF+ NL + ++ +G+YR P + S D + + + L
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLI 242
Query: 255 TDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSV 292
+P+ R T+++I++D W HED +LK V
Sbjct: 243 LNPSKRGTLEQIMKDRWM-------NVGHEDDELKPYV 273
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 167/292 (57%), Gaps = 10/292 (3%)
Query: 2 GDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTA 61
G++ + E G Y + K IG G FAKV R+V TG+ VA+K + K ++ L
Sbjct: 1 GNSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQK 60
Query: 62 HVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRY 120
+ RE+ IM L HPNIVKL+EV+ T+ +Y VME+A GGE+F ++ GR E+ +R
Sbjct: 61 -LFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 119
Query: 121 FQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGT 180
F+Q++SAV+YCH + + HRD I+DFG S + L T CG+
Sbjct: 120 FRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS---NEFTVGNKLDTFCGS 176
Query: 181 PAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKW 240
P Y APE+ K YDG +VD+WS GV+L+ L +G LPF+ NL + ++ +G+YR P +
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY 236
Query: 241 TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKF-----PHEDFD 287
S D + + +LL +P R ++++I++D W ++E + P DF+
Sbjct: 237 MSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYTEPDPDFN 288
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/290 (37%), Positives = 161/290 (55%), Gaps = 12/290 (4%)
Query: 4 NTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV 63
N+ + E G Y + K IG G FAKV R++ TG+ VA+K + K ++ L +
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-L 60
Query: 64 KREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQ 122
RE+ I L HPNIVKL+EV+ T+ +Y V E+A GGE+F ++ GR E+ +R F+
Sbjct: 61 FREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR 120
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
Q++SAV+YCH + + HRD I+DFG S + L CG P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS---NEFTFGNKLDAFCGAPP 177
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTS 242
Y APE+ K YDG +VD+WS GV+L+ L +G LPF+ NL + ++ +G+YR P + S
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXS 237
Query: 243 PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSV 292
D + + + L +P+ R T+++I +D W HED +LK V
Sbjct: 238 TDCENLLKKFLILNPSKRGTLEQIXKDRW-------XNVGHEDDELKPYV 280
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/272 (40%), Positives = 147/272 (54%), Gaps = 24/272 (8%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YE+ K IG G F R+ ++ + VA+K + + + + A+VKREI LRHP
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIAANVKREIINHRSLRHP 75
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NIV+ EV+ T + VME+A GGELF +I + GRFSE +R +FQQLIS V YCH+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 136 VFHRDXXXXXXXX--XXXXXXXISDFGLSAVKEQIRPDGMLHT----LCGTPAYVAPEIL 189
V HRD I DFG S +LH+ GTPAY+APE+L
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSK-------SSVLHSQPKSTVGTPAYIAPEVL 188
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRK----IYKGEYRCPKWT--SP 243
KK YDG D+WSCGV L+V+ G PF DP +RK I +Y P + SP
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKD 275
+ + I R+ DPA RI++ EI WF K+
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 146/272 (53%), Gaps = 24/272 (8%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YE+ K IG G F R+ ++ + VA+K + + + + +VKREI LRHP
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIDENVKREIINHRSLRHP 74
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NIV+ EV+ T + VME+A GGELF +I + GRFSE +R +FQQLIS V YCH+
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 136 VFHRDXXXXXXXX--XXXXXXXISDFGLSAVKEQIRPDGMLHT----LCGTPAYVAPEIL 189
V HRD I DFG S +LH+ GTPAY+APE+L
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSK-------SSVLHSQPKSTVGTPAYIAPEVL 187
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRK----IYKGEYRCPKWT--SP 243
KK YDG D+WSCGV L+V+ G PF DP +RK I +Y P + SP
Sbjct: 188 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 247
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKD 275
+ + I R+ DPA RI++ EI WF K+
Sbjct: 248 ECRHLISRIFVADPAKRISIPEIRNHEWFLKN 279
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 162/297 (54%), Gaps = 16/297 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y+ ++G GAF++V + RT + VAIK ++K+ + G ++ EI+++ +++HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPN 77
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
IV L ++ + +Y +M+ GGELF +I KG ++E+ + R Q++ AV+Y H G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 137 FHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
HRD ISDFGLS +++ P +L T CGTP YVAPE+LA+K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKP 194
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR--CPKW--TSPDLKWFI 249
Y A VD WS GV+ ++L GY PF D N ++ +I K EY P W S K FI
Sbjct: 195 YSKA-VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 250 GRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSVGCNVGSEKYLNAFD 306
L++ DP R T ++ L+ PW D K H+ + + + N K+ AF+
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQ--SVSEQIKKNFAKSKWKQAFN 308
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 162/297 (54%), Gaps = 16/297 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y+ ++G GAF++V + RT + VAIK ++K+ + G ++ EI+++ +++HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPN 77
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
IV L ++ + +Y +M+ GGELF +I KG ++E+ + R Q++ AV+Y H G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 137 FHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
HRD ISDFGLS +++ P +L T CGTP YVAPE+LA+K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKP 194
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR--CPKW--TSPDLKWFI 249
Y A VD WS GV+ ++L GY PF D N ++ +I K EY P W S K FI
Sbjct: 195 YSKA-VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 250 GRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSVGCNVGSEKYLNAFD 306
L++ DP R T ++ L+ PW D K H+ + + + N K+ AF+
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQ--SVSEQIKKNFAKSKWKQAFN 308
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 162/297 (54%), Gaps = 16/297 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y+ ++G GAF++V + RT + VAIK ++K+ + G ++ EI+++ +++HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIAVLHKIKHPN 77
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
IV L ++ + +Y +M+ GGELF +I KG ++E+ + R Q++ AV+Y H G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 137 FHRDXXXXXX---XXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
HRD ISDFGLS +++ P +L T CGTP YVAPE+LA+K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKP 194
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR--CPKW--TSPDLKWFI 249
Y A VD WS GV+ ++L GY PF D N ++ +I K EY P W S K FI
Sbjct: 195 YSKA-VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 250 GRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSVGCNVGSEKYLNAFD 306
L++ DP R T ++ L+ PW D K H+ + + + N K+ AF+
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQ--SVSEQIKKNFAKSKWKQAFN 308
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 145/272 (53%), Gaps = 24/272 (8%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YE+ K IG G F R+ + + VA+K + + + + +VKREI LRHP
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE----KIDENVKREIINHRSLRHP 75
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NIV+ EV+ T + VME+A GGELF +I + GRFSE +R +FQQLIS V Y H+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 136 VFHRDXXXXXXXX--XXXXXXXISDFGLSAVKEQIRPDGMLHT----LCGTPAYVAPEIL 189
V HRD I+DFG S +LH+ GTPAY+APE+L
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKA-------SVLHSQPKSAVGTPAYIAPEVL 188
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRK----IYKGEYRCPKWT--SP 243
KK YDG D+WSCGV L+V+ G PF DP +RK I +Y P + SP
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKD 275
+ + I R+ DPA RI++ EI WF K+
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 145/272 (53%), Gaps = 24/272 (8%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YE+ K IG G F R+ ++ + VA+K + + + + +VKREI LRHP
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIDENVKREIINHRSLRHP 75
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NIV+ EV+ T + VME+A GGELF +I + GRFSE +R +FQQLIS V YCH+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 136 VFHRDXXXXXXXX--XXXXXXXISDFGLSAVKEQIRPDGMLHT----LCGTPAYVAPEIL 189
V HRD I FG S +LH+ GTPAY+APE+L
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSK-------SSVLHSQPKSTVGTPAYIAPEVL 188
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRK----IYKGEYRCPKWT--SP 243
KK YDG D+WSCGV L+V+ G PF DP +RK I +Y P + SP
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKD 275
+ + I R+ DPA RI++ EI WF K+
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 145/272 (53%), Gaps = 24/272 (8%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YE+ K IG G F R+ ++ + VA+K + + + + +VKREI LRHP
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----KIDENVKREIINHRSLRHP 75
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NIV+ EV+ T + VME+A GGELF +I + GRFSE +R +FQQLIS V YCH+
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 136 VFHRDXXXXXXXX--XXXXXXXISDFGLSAVKEQIRPDGMLHT----LCGTPAYVAPEIL 189
V HRD I FG S +LH+ GTPAY+APE+L
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSK-------SSVLHSQPKDTVGTPAYIAPEVL 188
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRK----IYKGEYRCPKWT--SP 243
KK YDG D+WSCGV L+V+ G PF DP +RK I +Y P + SP
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKD 275
+ + I R+ DPA RI++ EI WF K+
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 153/275 (55%), Gaps = 14/275 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y+ ++G GAF++V + RT + VAIK ++K+ + G ++ EI+++ +++HPN
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPN 77
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
IV L ++ + +Y +M+ GGELF +I KG ++E+ + R Q++ AV+Y H G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 137 FHRD---XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
HRD ISDFGLS +++ P +L T CGTP YVAPE+LA+K
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKP 194
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR--CPKW--TSPDLKWFI 249
Y A VD WS GV+ ++L GY PF D N ++ +I K EY P W S K FI
Sbjct: 195 YSKA-VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFI 253
Query: 250 GRLLDTDPATRITVDEILRDPWFKKDYKERKFPHE 284
L++ DP R T ++ L+ PW D K H+
Sbjct: 254 RHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQ 288
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 142/272 (52%), Gaps = 24/272 (8%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y+ K IG G F R+ T + VA+K + + + +V+REI LRHP
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG----AAIDENVQREIINHRSLRHP 76
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NIV+ EV+ T + +ME+A GGEL+ +I + GRFSE +R +FQQL+S V YCHS
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 136 VFHRDXXXXXXXX--XXXXXXXISDFGLSAVKEQIRPDGMLHT----LCGTPAYVAPEIL 189
+ HRD I DFG S +LH+ GTPAY+APE+L
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSK-------SSVLHSQPKSTVGTPAYIAPEVL 189
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRK----IYKGEYRCPK--WTSP 243
++ YDG D+WSCGV L+V+ G PF DP YRK I +Y P SP
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISP 249
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKD 275
+ I R+ DPATRI++ EI WF K+
Sbjct: 250 ECCHLISRIFVADPATRISIPEIKTHSWFLKN 281
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 155/297 (52%), Gaps = 16/297 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E + +G GAF++V TG+ A+K + K+ + G + ++ EI+++ +++H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL--KGKESSIENEIAVLRKIKHEN 81
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
IV L ++ + +Y VM+ GGELF +I KG ++E+ + +Q++ AV Y H G+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 137 FHRDXXXXXX---XXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
HRD ISDFGLS ++ + ++ T CGTP YVAPE+LA+K
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSKMEGK---GDVMSTACGTPGYVAPEVLAQKP 198
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR--CPKW--TSPDLKWFI 249
Y A VD WS GV+ ++L GY PF D N ++ +I K EY P W S K FI
Sbjct: 199 YSKA-VDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFI 257
Query: 250 GRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSVGCNVGSEKYLNAFD 306
L++ DP R T ++ R PW D K HE + + N K+ AF+
Sbjct: 258 RNLMEKDPNKRYTCEQAARHPWIAGDTALNKNIHESVSAQ--IRKNFAKSKWRQAFN 312
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 145/258 (56%), Gaps = 16/258 (6%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+++G GAF++V+ + TG+ A+K + K R + ++ EI+++ +++H NIV L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRD---SSLENEIAVLKKIKHENIVTL 71
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
++ + Y VM+ GGELF +I +G ++E+ + QQ++SAV+Y H G+ HRD
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRD 131
Query: 141 XX---XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
I+DFGLS +++ +G++ T CGTP YVAPE+LA+K Y A
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSKMEQ----NGIMSTACGTPGYVAPEVLAQKPYSKA 187
Query: 198 KVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKG--EYRCPKW--TSPDLKWFIGRLL 253
VD WS GV+ ++L GY PF + ++ KI +G E+ P W S K FI LL
Sbjct: 188 -VDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLL 246
Query: 254 DTDPATRITVDEILRDPW 271
+ DP R T ++ L PW
Sbjct: 247 EKDPNERYTCEKALSHPW 264
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 140/261 (53%), Gaps = 7/261 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++VG ++G G+FA VY ++ TG VAIK + K+ + + G+ V+ E+ I +L+HP+
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
I++LY +Y V+E GE+ + K FSE +R + Q+I+ + Y HS G
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIR-PDGMLHTLCGTPAYVAPEILAKKGY 194
+ HRD I+DFGL+ Q++ P +TLCGTP Y++PEI A +
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLAT---QLKMPHEKHYTLCGTPNYISPEI-ATRSA 188
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLD 254
G + D+WS G + + L G PF+ + K+ +Y P + S + K I +LL
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLR 248
Query: 255 TDPATRITVDEILRDPWFKKD 275
+PA R+++ +L P+ ++
Sbjct: 249 RNPADRLSLSSVLDHPFMSRN 269
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 137/259 (52%), Gaps = 6/259 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++G+ +G G F VY R + +A+K + K ++ + G+ ++REI I S LRHPN
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I+++Y + +IY ++EFA GEL+ ++ K GRF EQ S + ++L A+ YCH R V
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 136
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S +R M CGT Y+ PE++ K +D
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTHD- 191
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+W GV+ + G PF+ P+ +R+I + + P + S K I +LL
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 251
Query: 257 PATRITVDEILRDPWFKKD 275
P R+ + ++ PW K +
Sbjct: 252 PPQRLPLKGVMEHPWVKAN 270
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 137/259 (52%), Gaps = 6/259 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++G+ +G G F VY R + +A+K + K ++ + G+ ++REI I S LRHPN
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I+++Y + +IY ++EFA GEL+ ++ K GRF EQ S + ++L A+ YCH R V
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S +R M CGT Y+ PE++ K +D
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTHD- 190
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+W GV+ + G PF+ P+ +R+I + + P + S K I +LL
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 250
Query: 257 PATRITVDEILRDPWFKKD 275
P R+ + ++ PW K +
Sbjct: 251 PPQRLPLKGVMEHPWVKAN 269
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 139/259 (53%), Gaps = 6/259 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K RF EQ + Y +L +A+ YCHS+ V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S R D TLCGT Y+ PE++ + +D
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRMHD- 188
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF YR+I + E+ P + + + I RLL +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 257 PATRITVDEILRDPWFKKD 275
+ R+T+ E+L PW K +
Sbjct: 249 ASQRLTLAEVLEHPWIKAN 267
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 138/259 (53%), Gaps = 6/259 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K RF EQ + Y +L +A+ YCHS+ V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRV 133
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TLCGT Y+ PE++ + +D
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 188
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF YR+I + E+ P + + + I RLL +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 257 PATRITVDEILRDPWFKKD 275
+ R+T+ E+L PW K +
Sbjct: 249 ASQRLTLAEVLEHPWIKAN 267
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 136/255 (53%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A GE++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TLCGT Y+ PE++ + +D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 189
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 250 PSQRPMLREVLEHPW 264
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 136/259 (52%), Gaps = 6/259 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G G F VY R + +A+K + K ++ + G+ ++REI I S LRHPN
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I+++Y + +IY ++EFA GEL+ ++ K GRF EQ S + ++L A+ YCH R V
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S +R M CGT Y+ PE++ K +D
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM----CGTLDYLPPEMIEGKTHD- 190
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+W GV+ + G PF+ P+ +R+I + + P + S K I +LL
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYH 250
Query: 257 PATRITVDEILRDPWFKKD 275
P R+ + ++ PW K +
Sbjct: 251 PPQRLPLKGVMEHPWVKAN 269
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 135/256 (52%), Gaps = 6/256 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 146
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TLCGT Y+ PE++ + +D
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 201
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 261
Query: 257 PATRITVDEILRDPWF 272
P+ R + E+L PW
Sbjct: 262 PSQRPMLREVLEHPWI 277
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 136/255 (53%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S R D TLCGT Y+ PE++ + +D
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRMHD- 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 246 PSQRPMLREVLEHPW 260
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 135/256 (52%), Gaps = 6/256 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 155
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TLCGT Y+ PE++ + +D
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 210
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 270
Query: 257 PATRITVDEILRDPWF 272
P+ R + E+L PW
Sbjct: 271 PSQRPMLREVLEHPWI 286
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 135/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TLCGT Y+ PE++ + +D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 187
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 248 PSQRPMLREVLEHPW 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 135/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TLCGT Y+ PE++ + +D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 189
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 250 PSQRPMLREVLEHPW 264
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 136/259 (52%), Gaps = 6/259 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TLCGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 184
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 257 PATRITVDEILRDPWFKKD 275
P+ R + E+L PW +
Sbjct: 245 PSQRPMLREVLEHPWITAN 263
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 135/256 (52%), Gaps = 6/256 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 155
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S R D LCGT Y+ PE++ + +D
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD----LCGTLDYLPPEMIEGRMHD- 210
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 270
Query: 257 PATRITVDEILRDPWF 272
P+ R + E+L PW
Sbjct: 271 PSQRPMLREVLEHPWI 286
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 135/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TLCGT Y+ PE++ + +D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 187
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 248 PSQRPMLREVLEHPW 262
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TLCGT Y+ PE + + +D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTTLCGTLDYLPPEXIEGRXHD- 189
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 250 PSQRPXLREVLEHPW 264
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 135/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 128
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TLCGT Y+ PE++ + +D
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 183
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 243
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 244 PSQRPMLREVLEHPW 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 136/259 (52%), Gaps = 6/259 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 133
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TLCGT Y+ PE++ + +D
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 188
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 248
Query: 257 PATRITVDEILRDPWFKKD 275
P+ R + E+L PW +
Sbjct: 249 PSQRPMLREVLEHPWITAN 267
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 135/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S R D LCGT Y+ PE++ + +D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----DLCGTLDYLPPEMIEGRMHD- 187
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 248 PSQRPMLREVLEHPW 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 135/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I++FG S P TLCGT Y+ PE++ + +D
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 186
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 246
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 247 PSQRPMLREVLEHPW 261
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 135/259 (52%), Gaps = 6/259 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R + +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 126
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TLCGT Y+ PE++ + +D
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 181
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 241
Query: 257 PATRITVDEILRDPWFKKD 275
P+ R + E+L PW +
Sbjct: 242 PSQRPMLREVLEHPWITAN 260
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 136/259 (52%), Gaps = 6/259 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I++FG S P TLCGT Y+ PE++ + +D
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGWSVHA----PSSRRTTLCGTLDYLPPEMIEGRMHD- 187
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 257 PATRITVDEILRDPWFKKD 275
P+ R + E+L PW +
Sbjct: 248 PSQRPMLREVLEHPWITAN 266
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 131
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P LCGT Y+ PE++ + +D
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRXXLCGTLDYLPPEMIEGRMHD- 186
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 246
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 247 PSQRPMLREVLEHPW 261
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 135/259 (52%), Gaps = 6/259 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P LCGT Y+ PE++ + +D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRAALCGTLDYLPPEMIEGRMHD- 187
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 257 PATRITVDEILRDPWFKKD 275
P+ R + E+L PW +
Sbjct: 248 PSQRPMLREVLEHPWITAN 266
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P LCGT Y+ PE++ + +D
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRXXLCGTLDYLPPEMIEGRMHD- 187
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 248 PSQRPMLREVLEHPW 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P LCGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRXXLCGTLDYLPPEMIEGRMHD- 184
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 245 PSQRPMLREVLEHPW 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P LCGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTDLCGTLDYLPPEMIEGRMHD- 184
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 245 PSQRPMLREVLEHPW 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P LCGT Y+ PE++ + +D
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTDLCGTLDYLPPEMIEGRMHD- 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 246 PSQRPMLREVLEHPW 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 135/259 (52%), Gaps = 6/259 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P LCGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTELCGTLDYLPPEMIEGRMHD- 184
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 257 PATRITVDEILRDPWFKKD 275
P+ R + E+L PW +
Sbjct: 245 PSQRPMLREVLEHPWITAN 263
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P LCGT Y+ PE++ + +D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTDLCGTLDYLPPEMIEGRMHD- 189
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 250 PSQRPMLREVLEHPW 264
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P LCGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTXLCGTLDYLPPEMIEGRMHD- 184
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 245 PSQRPMLREVLEHPW 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P LCGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRTDLCGTLDYLPPEMIEGRMHD- 184
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 245 PSQRPMLREVLEHPW 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P LCGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRAALCGTLDYLPPEMIEGRMHD- 184
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 245 PSQRPMLREVLEHPW 259
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A GE++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRV 134
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P L GT Y+ PE++ + +D
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRXXLXGTLDYLPPEMIEGRMHD- 189
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 249
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 250 PSQRPMLREVLEHPW 264
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 127/241 (52%), Gaps = 4/241 (1%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K++G G F KV R TG+ A+K + K+ I+ AH E ++ RHP + L
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
T ++ FVME+A GGELF +S+ R F+E+ +R Y +++SA+EY HSR V +RD
Sbjct: 74 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 133
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I+DFGL KE I + T CGTP Y+APE+L Y G VD
Sbjct: 134 IKLENLMLDKDGHIKITDFGL--CKEGISDGATMKTFCGTPEYLAPEVLEDNDY-GRAVD 190
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W GVV++ + G LPF + + ++ I E R P+ SP+ K + LL DP R
Sbjct: 191 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQR 250
Query: 261 I 261
+
Sbjct: 251 L 251
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 133/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R + +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKV 129
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P LCGT Y+ PE++ + +D
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRRAALCGTLDYLPPEMIEGRMHD- 184
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 245 PSQRPMLREVLEHPW 259
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 127/241 (52%), Gaps = 4/241 (1%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K++G G F KV R TG+ A+K + K+ I+ AH E ++ RHP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
T ++ FVME+A GGELF +S+ R F+E+ +R Y +++SA+EY HSR V +RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I+DFGL KE I + T CGTP Y+APE+L Y G VD
Sbjct: 131 IKLENLMLDKDGHIKITDFGLC--KEGISDGATMKTFCGTPEYLAPEVLEDNDY-GRAVD 187
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W GVV++ + G LPF + + ++ I E R P+ SP+ K + LL DP R
Sbjct: 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
Query: 261 I 261
+
Sbjct: 248 L 248
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 127/241 (52%), Gaps = 4/241 (1%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K++G G F KV R TG+ A+K + K+ I+ AH E ++ RHP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
T ++ FVME+A GGELF +S+ R F+E+ +R Y +++SA+EY HSR V +RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I+DFGL KE I + T CGTP Y+APE+L Y G VD
Sbjct: 131 IKLENLMLDKDGHIKITDFGL--CKEGISDGATMKTFCGTPEYLAPEVLEDNDY-GRAVD 187
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W GVV++ + G LPF + + ++ I E R P+ SP+ K + LL DP R
Sbjct: 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
Query: 261 I 261
+
Sbjct: 248 L 248
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 136/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+A GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFGL+ R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 136/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+A GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFGL+ R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 6/255 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+G+ +G G F VY R ++ +A+K + K ++ + G+ ++RE+ I S LRHPN
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
I++LY ++Y ++E+A G ++ ++ K +F EQ + Y +L +A+ YCHS+ V
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 130
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG S P TL GT Y+ PE++ + +D
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSCHA----PSSRRTTLSGTLDYLPPEMIEGRMHD- 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
KVD+WS GV+ + G PF Y++I + E+ P + + + I RLL +
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 245
Query: 257 PATRITVDEILRDPW 271
P+ R + E+L PW
Sbjct: 246 PSQRPMLREVLEHPW 260
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 135/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G TLCGTP Y+APEI+ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYN 217
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 126/241 (52%), Gaps = 4/241 (1%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K++G G F KV R TG+ A+K + K+ I+ AH E ++ RHP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
T ++ FVME+A GGELF +S+ R F+E+ +R Y +++SA+EY HSR V +RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I+DFGL KE I + CGTP Y+APE+L Y G VD
Sbjct: 131 IKLENLMLDKDGHIKITDFGLC--KEGISDGATMKXFCGTPEYLAPEVLEDNDY-GRAVD 187
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W GVV++ + G LPF + + ++ I E R P+ SP+ K + LL DP R
Sbjct: 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
Query: 261 I 261
+
Sbjct: 248 L 248
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 135/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 87
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 88 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 147
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G TLCGTP Y+APEI+ KGY+
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEIILSKGYN 202
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 203 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 261
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 262 DLTKRFGNLKDGVNDIKNHKWF 283
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 126/241 (52%), Gaps = 4/241 (1%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K++G G F KV R TG+ A+K + K+ I+ AH E ++ RHP + L
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
T ++ FVME+A GGELF +S+ R F+E+ +R Y +++SA+EY HSR V +RD
Sbjct: 76 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 135
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I+DFGL KE I + CGTP Y+APE+L Y G VD
Sbjct: 136 IKLENLMLDKDGHIKITDFGLC--KEGISDGATMKXFCGTPEYLAPEVLEDNDY-GRAVD 192
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W GVV++ + G LPF + + ++ I E R P+ SP+ K + LL DP R
Sbjct: 193 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQR 252
Query: 261 I 261
+
Sbjct: 253 L 253
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 135/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+A GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 135/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+A GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 144/268 (53%), Gaps = 12/268 (4%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
++ +Y++ + +G GAF+ V + TGQ A K ++ +K L ++RE I
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKK-LSARDHQKLEREARICRL 59
Query: 73 LRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYC 131
L+HPNIV+L++ ++ + Y V + GGELF I ++ +SE + QQ++ +V +C
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 132 HSRGVFHRDXX---XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
H G+ HRD ++DFGL A++ Q GTP Y++PE+
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGL-AIEVQGDQQAWF-GFAGTPGYLSPEV 177
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPD 244
L K Y G VDMW+CGV+L++L GY PF D + +Y++I G Y P+W +P+
Sbjct: 178 LRKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 236
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPWF 272
K I ++L +PA RIT E L+ PW
Sbjct: 237 AKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 126/241 (52%), Gaps = 4/241 (1%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K++G G F KV R TG+ A+K + K+ I+ AH E ++ RHP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
T ++ FVME+A GGELF +S+ R F+E+ +R Y +++SA+EY HSR V +RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I+DFGL KE I + CGTP Y+APE+L Y G VD
Sbjct: 131 IKLENLMLDKDGHIKITDFGLC--KEGISDGATMKXFCGTPEYLAPEVLEDNDY-GRAVD 187
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W GVV++ + G LPF + + ++ I E R P+ SP+ K + LL DP R
Sbjct: 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
Query: 261 I 261
+
Sbjct: 248 L 248
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 126/241 (52%), Gaps = 4/241 (1%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K++G G F KV R TG+ A+K + K+ I+ AH E ++ RHP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
T ++ FVME+A GGELF +S+ R F+E+ +R Y +++SA+EY HSR V +RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I+DFGL KE I + CGTP Y+APE+L Y G VD
Sbjct: 131 IKLENLMLDKDGHIKITDFGL--CKEGISDGATMKXFCGTPEYLAPEVLEDNDY-GRAVD 187
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W GVV++ + G LPF + + ++ I E R P+ SP+ K + LL DP R
Sbjct: 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
Query: 261 I 261
+
Sbjct: 248 L 248
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 144/268 (53%), Gaps = 12/268 (4%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
++ +Y++ + +G GAF+ V + TGQ A K ++ +K L ++RE I
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKK-LSARDHQKLEREARICRL 59
Query: 73 LRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYC 131
L+HPNIV+L++ ++ + Y V + GGELF I ++ +SE + QQ++ +V +C
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 132 HSRGVFHRDXX---XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
H G+ HRD ++DFGL A++ Q GTP Y++PE+
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGL-AIEVQGDQQAWF-GFAGTPGYLSPEV 177
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPD 244
L K Y G VDMW+CGV+L++L GY PF D + +Y++I G Y P+W +P+
Sbjct: 178 LRKDPY-GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPE 236
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPWF 272
K I ++L +PA RIT E L+ PW
Sbjct: 237 AKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 146/263 (55%), Gaps = 12/263 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G G+F +V+ R+ G+ A+K + K+ ++R H E ++S + HP
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
I++++ +I+ +M++ +GGELF+ + K RF +++ Y ++ A+EY HS+ +
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
+RD I+DFG + + PD + + LCGTP Y+APE+++ K Y+
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFA----KYVPD-VTYXLCGTPDYIAPEVVSTKPYNK 182
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ +D WS G++++ + AGY PF D N M Y KI E R P + + D+K + RL+ D
Sbjct: 183 S-IDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRD 241
Query: 257 PATRI-----TVDEILRDPWFKK 274
+ R+ +++ PWFK+
Sbjct: 242 LSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K IG G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+ KL + +Y VME+A GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+ KL + +Y VME+A GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKDGVNDIKNHKWF 297
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKDGVNDIKNHKWF 297
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V ++ TG A+K + KQK+++ H E I+ + P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+A GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+A GGE+F+ + + GRF E +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 138/263 (52%), Gaps = 13/263 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y+V + +G GAF+ V + TG A K ++ +K L ++RE I +L+HPN
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPN 89
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRF-SEQLSRRYFQQLISAVEYCHSRGV 136
IV+L++ + ++ Y V + GGELF I F SE + QQ++ ++ YCHS G+
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 149
Query: 137 FHRD---XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
HR+ ++DFGL+ ++ H GTP Y++PE+L K
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKG--EYRCPKW--TSPDLKWFI 249
Y VD+W+CGV+L++L GY PF D + +Y +I G +Y P+W +P+ K I
Sbjct: 207 Y-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 265
Query: 250 GRLLDTDPATRITVDEILRDPWF 272
+L +P RIT D+ L+ PW
Sbjct: 266 DSMLTVNPKKRITADQALKVPWI 288
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 138/269 (51%), Gaps = 13/269 (4%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL 73
L +Y+ K +G GA+ +V ++ TG AIK + K + + + E++++ +L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQQLISAVEYCH 132
HPNI+KLYE K Y VME +GGELF + I + +FSE + +Q++S Y H
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 133 SRGVFHRD---XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEIL 189
+ HRD I DFGLSA G + GT Y+APE+L
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA---HFEVGGKMKERLGTAYYIAPEVL 178
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRC--PKWT--SPDL 245
KK YD K D+WSCGV+L++L GY PF + +++ KG++ P WT S +
Sbjct: 179 RKK-YD-EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA 236
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFKK 274
K + +L +P+ RI+ +E L PW K
Sbjct: 237 KQLVKLMLTYEPSKRISAEEALNHPWIVK 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 138/263 (52%), Gaps = 13/263 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y+V + +G GAF+ V + TG A K ++ +K L ++RE I +L+HPN
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRF-SEQLSRRYFQQLISAVEYCHSRGV 136
IV+L++ + ++ Y V + GGELF I F SE + QQ++ ++ YCHS G+
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 125
Query: 137 FHRD---XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
HR+ ++DFGL+ ++ H GTP Y++PE+L K
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKG--EYRCPKW--TSPDLKWFI 249
Y VD+W+CGV+L++L GY PF D + +Y +I G +Y P+W +P+ K I
Sbjct: 183 Y-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 241
Query: 250 GRLLDTDPATRITVDEILRDPWF 272
+L +P RIT D+ L+ PW
Sbjct: 242 DSMLTVNPKKRITADQALKVPWI 264
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V ++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V ++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V ++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKDGVNDIKNHKWF 297
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 138/263 (52%), Gaps = 13/263 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y+V + +G GAF+ V + TG A K ++ +K L ++RE I +L+HPN
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPN 66
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRF-SEQLSRRYFQQLISAVEYCHSRGV 136
IV+L++ + ++ Y V + GGELF I F SE + QQ++ ++ YCHS G+
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 137 FHRDXX---XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
HR+ ++DFGL+ ++ H GTP Y++PE+L K
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKG--EYRCPKW--TSPDLKWFI 249
Y VD+W+CGV+L++L GY PF D + +Y +I G +Y P+W +P+ K I
Sbjct: 184 Y-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 250 GRLLDTDPATRITVDEILRDPWF 272
+L +P RIT D+ L+ PW
Sbjct: 243 DSMLTVNPKKRITADQALKVPWI 265
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V ++ TG A+K + KQK+++ H E I+ + P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 277 DLTKRFGNLKNGVNDIXNHKWF 298
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 138/263 (52%), Gaps = 13/263 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y+V + +G GAF+ V + TG A K ++ +K L ++RE I +L+HPN
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPN 66
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRF-SEQLSRRYFQQLISAVEYCHSRGV 136
IV+L++ + ++ Y V + GGELF I F SE + QQ++ ++ YCHS G+
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 137 FHRD---XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
HR+ ++DFGL+ ++ H GTP Y++PE+L K
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKG--EYRCPKW--TSPDLKWFI 249
Y VD+W+CGV+L++L GY PF D + +Y +I G +Y P+W +P+ K I
Sbjct: 184 Y-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 250 GRLLDTDPATRITVDEILRDPWF 272
+L +P RIT D+ L+ PW
Sbjct: 243 DSMLTVNPKKRITADQALKVPWI 265
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K IG G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GG++F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K IG G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GG++F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V ++ TG A+K + KQK+++ H E I+ + P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V ++ TG A+K + KQK+++ H E I+ + P
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 154
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 209
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 210 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 268
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 269 DLTKRFGNLKNGVNDIKNHKWF 290
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V ++ TG A+K + KQK+++ H E I+ + P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 131/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V ++ GT YV+PE+L +K
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 210
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 211 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 270 ATKRLGCEEM 279
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 131/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G TLCGTP Y+APEI+ KGY+ A VD
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIILSKGYNKA-VD 241
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 301
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 302 FGNLKNGVNDIKNHKWF 318
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 131/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V ++ GT YV+PE+L +K
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 214
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 215 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 274 ATKRLGCEEM 283
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+ KL + +Y VME+A GGE+F+ + + GRF E +R Y Q++ EY HS
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 162
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRF E +R Y Q++ EY HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 162
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V ++ TG A+K + KQK+++ H E I+ + P
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 182
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 237
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 238 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 296
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 297 DLTKRFGNLKNGVNDIKNHKWF 318
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRF E +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V +++ TG A+K + KQK+++ H E I+ + P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRF E +R Y Q++ EY HS
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 217 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 275
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 276 DLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 190
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 191 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 249
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 250 ATKRLGCEEM 259
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 189
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 190 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 248
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 249 ATKRLGCEEM 258
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 188
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 189 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 247
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 248 ATKRLGCEEM 257
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACK 211
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 212 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 271 ATKRLGCEEM 280
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 137/270 (50%), Gaps = 13/270 (4%)
Query: 2 GDNTGDISREVNL--------FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQK 53
DN+G EV+L ++E K++G G F KV + TG+ A+K + K+
Sbjct: 129 SDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEV 188
Query: 54 ILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-F 112
I+ AH E ++ RHP + L T ++ FVME+A GGELF +S+ R F
Sbjct: 189 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 248
Query: 113 SEQLSRRYFQQLISAVEYCHS-RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
SE +R Y +++SA++Y HS + V +RD I+DFGL KE I+
Sbjct: 249 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDG 306
Query: 172 GMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY 231
+ T CGTP Y+APE+L Y G VD W GVV++ + G LPF + + ++ I
Sbjct: 307 ATMKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 365
Query: 232 KGEYRCPKWTSPDLKWFIGRLLDTDPATRI 261
E R P+ P+ K + LL DP R+
Sbjct: 366 MEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 395
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 195
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 196 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 254
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 255 ATKRLGCEEM 264
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 210
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 211 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 270 ATKRLGCEEM 279
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 212 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 271 ATKRLGCEEM 280
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 191
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 192 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 250
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 251 ATKRLGCEEM 260
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 139/269 (51%), Gaps = 14/269 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILR--GGLTAHVKREISIMSRLRH 75
YE+ ++IG GAF+ V N TGQ A+K V K G T +KRE SI L+H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSRRYFQQLISAVEY 130
P+IV+L E ++ +Y V EF G +L +I K +SE ++ Y +Q++ A+ Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 131 CHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLH-TLCGTPAYVAPEIL 189
CH + HRD G V Q+ G++ GTP ++APE++
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP--KWT--SPDL 245
++ Y G VD+W CGV+LF+L +G LPF ++ I KG+Y+ +W+ S
Sbjct: 206 KREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFKK 274
K + R+L DPA RITV E L PW K+
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 139/274 (50%), Gaps = 6/274 (2%)
Query: 5 TGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVK 64
T DI +E+G+ +G G F VY R ++ VA+K + K +I + G+ ++
Sbjct: 12 TPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLR 71
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQ 123
REI I + L HPNI++LY + +IY ++E+A GEL+ ++ K F EQ + ++
Sbjct: 72 REIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEE 131
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY 183
L A+ YCH + V HRD I+DFG S +R T+CGT Y
Sbjct: 132 LADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK----TMCGTLDY 187
Query: 184 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSP 243
+ PE++ + ++ KVD+W GV+ + L G PF + YR+I K + + P
Sbjct: 188 LPPEMIEGRMHN-EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPT 246
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKDYK 277
+ I +LL +P+ R+ + ++ PW + + +
Sbjct: 247 GAQDLISKLLRHNPSERLPLAQVSAHPWVRANSR 280
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 214 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 273 ATKRLGCEEM 282
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 214 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 273 ATKRLGCEEM 282
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 212 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 271 ATKRLGCEEM 280
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 214 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 273 ATKRLGCEEM 282
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 218
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 219 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 277
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 278 ATKRLGCEEM 287
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 137/270 (50%), Gaps = 13/270 (4%)
Query: 2 GDNTGDISREVNL--------FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQK 53
DN+G EV+L ++E K++G G F KV + TG+ A+K + K+
Sbjct: 126 SDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEV 185
Query: 54 ILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-F 112
I+ AH E ++ RHP + L T ++ FVME+A GGELF +S+ R F
Sbjct: 186 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 245
Query: 113 SEQLSRRYFQQLISAVEYCHS-RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
SE +R Y +++SA++Y HS + V +RD I+DFGL KE I+
Sbjct: 246 SEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDG 303
Query: 172 GMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY 231
+ T CGTP Y+APE+L Y G VD W GVV++ + G LPF + + ++ I
Sbjct: 304 ATMKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 362
Query: 232 KGEYRCPKWTSPDLKWFIGRLLDTDPATRI 261
E R P+ P+ K + LL DP R+
Sbjct: 363 MEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 392
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 214
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 215 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 274 ATKRLGCEEM 283
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 138/269 (51%), Gaps = 13/269 (4%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL 73
L +Y+ K +G GA+ +V ++ TG AIK + K + + + E++++ +L
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQQLISAVEYCH 132
HPNI+KLYE K Y VME +GGELF + I + +FSE + +Q++S Y H
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 133 SRGVFHRDXX---XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEIL 189
+ HRD I DFGLSA G + GT Y+APE+L
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA---HFEVGGKMKERLGTAYYIAPEVL 195
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRC--PKWT--SPDL 245
KK YD K D+WSCGV+L++L GY PF + +++ KG++ P WT S +
Sbjct: 196 RKK-YD-EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEA 253
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFKK 274
K + +L +P+ RI+ +E L PW K
Sbjct: 254 KQLVKLMLTYEPSKRISAEEALNHPWIVK 282
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 143/280 (51%), Gaps = 26/280 (9%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK---QKILRGGLTAHVKREISIMSRLR 74
+EV +G GA + VY + T + A+K + K +KI+R EI ++ RL
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR--------TEIGVLLRLS 106
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHS 133
HPNI+KL E+ T +I V+E GGELF +I KG +SE+ + +Q++ AV Y H
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE 166
Query: 134 RGVFHRDXX---XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILA 190
G+ HRD I+DFGLS + E ++ T+CGTP Y APEIL
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH---QVLMKTVCGTPGYCAPEILR 223
Query: 191 KKGYDGAKVDMWSCGVVLFVLNAGYLPFNDP-NLMAMYRKIYKGEYR--CPKW--TSPDL 245
Y G +VDMWS G++ ++L G+ PF D M+R+I EY P W S +
Sbjct: 224 GCAY-GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNA 282
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHED 285
K + +L+ DP R+T + L+ PW K F H D
Sbjct: 283 KDLVRKLIVLDPKKRLTTFQALQHPWVTG--KAANFVHMD 320
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 216
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P P + + +LL D
Sbjct: 217 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLD 275
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 276 ATKRLGCEEM 285
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 132/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K +G G+F +V ++ TG A+K + KQK+++ H E I+ + P
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y VME+ GGE+F+ + + GRF E +R Y Q++ EY HS
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLD 154
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 209
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 210 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 268
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 269 DLTKRFGNLKNGVNDIKNHKWF 290
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 143/281 (50%), Gaps = 20/281 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGL-----TAHVKREISIMS 71
+Y + K +G GA +V +T + VAIK +SK+K G +V+ EI I+
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 72 RLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEY 130
+L HP I+K+ + Y V+E +GGELF K+ R E + YF Q++ AV+Y
Sbjct: 70 KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 131 CHSRGVFHRDXXXXXXXXXXXXX---XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
H G+ HRD I+DFG S + + ++ TLCGTP Y+APE
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLAPE 185
Query: 188 ILAKKGYDGAK--VDMWSCGVVLFVLNAGYLPFNDPNL-MAMYRKIYKGEYR-CPK-WTS 242
+L G G VD WS GV+LF+ +GY PF++ +++ +I G+Y P+ W
Sbjct: 186 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE 245
Query: 243 PDLKW--FIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
K + +LL DP R T +E LR PW + + +RKF
Sbjct: 246 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 286
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 143/281 (50%), Gaps = 20/281 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGL-----TAHVKREISIMS 71
+Y + K +G GA +V +T + VAIK +SK+K G +V+ EI I+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 72 RLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEY 130
+L HP I+K+ + Y V+E +GGELF K+ R E + YF Q++ AV+Y
Sbjct: 71 KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 131 CHSRGVFHRDXXXXXXXXXXXXX---XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
H G+ HRD I+DFG S + + ++ TLCGTP Y+APE
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLAPE 186
Query: 188 ILAKKGYDGAK--VDMWSCGVVLFVLNAGYLPFNDPNL-MAMYRKIYKGEYR-CPK-WTS 242
+L G G VD WS GV+LF+ +GY PF++ +++ +I G+Y P+ W
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE 246
Query: 243 PDLKW--FIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
K + +LL DP R T +E LR PW + + +RKF
Sbjct: 247 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 287
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 18/266 (6%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y++ + +G GAF+ V V GQ A K ++ +K L ++RE I L+HPN
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKK-LSARDHQKLEREARICRLLKHPN 82
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
IV+L++ ++ + Y + + GGELF I ++ +SE + QQ++ AV +CH GV
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 137 FHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHT---LCGTPAYVAPEILA 190
HRD ++DFGL+ I +G GTP Y++PE+L
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLA-----IEVEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 191 KKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLK 246
K Y G VD+W+CGV+L++L GY PF D + +Y++I G Y P+W +P+ K
Sbjct: 198 KDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 256
Query: 247 WFIGRLLDTDPATRITVDEILRDPWF 272
I ++L +P+ RIT E L+ PW
Sbjct: 257 DLINKMLTINPSKRITAAEALKHPWI 282
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 143/281 (50%), Gaps = 20/281 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGL-----TAHVKREISIMS 71
+Y + K +G GA +V +T + VAIK +SK+K G +V+ EI I+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 72 RLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEY 130
+L HP I+K+ + Y V+E +GGELF K+ R E + YF Q++ AV+Y
Sbjct: 71 KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 131 CHSRGVFHRDXXXXXXXXXXXXX---XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
H G+ HRD I+DFG S + + ++ TLCGTP Y+APE
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLAPE 186
Query: 188 ILAKKGYDGAK--VDMWSCGVVLFVLNAGYLPFNDPNL-MAMYRKIYKGEYR-CPK-WTS 242
+L G G VD WS GV+LF+ +GY PF++ +++ +I G+Y P+ W
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE 246
Query: 243 PDLKW--FIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
K + +LL DP R T +E LR PW + + +RKF
Sbjct: 247 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 287
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXK 213
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N ++ KI K EY P+ P + + +LL D
Sbjct: 214 SS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 273 ATKRLGCEEM 282
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 108 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 221
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 282 FGNLKNGVNDIKNHKWF 298
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 143/281 (50%), Gaps = 20/281 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGL-----TAHVKREISIMS 71
+Y + K +G GA +V +T + VAIK +SK+K G +V+ EI I+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 72 RLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEY 130
+L HP I+K+ + Y V+E +GGELF K+ R E + YF Q++ AV+Y
Sbjct: 71 KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 131 CHSRGVFHRDXXXXXXXXXXXXX---XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
H G+ HRD I+DFG S + + ++ TLCGTP Y+APE
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLAPE 186
Query: 188 ILAKKGYDGAK--VDMWSCGVVLFVLNAGYLPFNDPNL-MAMYRKIYKGEYR-CPK-WTS 242
+L G G VD WS GV+LF+ +GY PF++ +++ +I G+Y P+ W
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE 246
Query: 243 PDLKW--FIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
K + +LL DP R T +E LR PW + + +RKF
Sbjct: 247 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 287
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 212 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 271 ATKRLGCEEM 280
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIIISKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E + +G G+F +V ++ TG A+K + KQK+++ H E I + P
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFP 102
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
+VKL + +Y V+E+A GGE+F+ + + GRFSE +R Y Q++ EY HS
Sbjct: 103 FLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 162
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG + R G LCGTP Y+APEI+ KGY+
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
A VD W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL
Sbjct: 218 KA-VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQV 276
Query: 256 DPATRI-----TVDEILRDPWF 272
D R V++I WF
Sbjct: 277 DLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 143/281 (50%), Gaps = 20/281 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGL-----TAHVKREISIMS 71
+Y + K +G GA +V +T + VAIK +SK+K G +V+ EI I+
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 72 RLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEY 130
+L HP I+K+ + Y V+E +GGELF K+ R E + YF Q++ AV+Y
Sbjct: 77 KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 131 CHSRGVFHRDXXXXXXXXXXXXX---XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
H G+ HRD I+DFG S + + ++ TLCGTP Y+APE
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLAPE 192
Query: 188 ILAKKGYDGAK--VDMWSCGVVLFVLNAGYLPFNDPNL-MAMYRKIYKGEYR-CPK-WTS 242
+L G G VD WS GV+LF+ +GY PF++ +++ +I G+Y P+ W
Sbjct: 193 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE 252
Query: 243 PDLKW--FIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
K + +LL DP R T +E LR PW + + +RKF
Sbjct: 253 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 293
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLPNGVNDIKNHKWF 297
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 94 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 153
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 154 LKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 207
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 208 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 267
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 268 FGNLKNGVNDIKNHKWF 284
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 130/250 (52%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK G L I K G F E +R Y +++SA+EY H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V ++ GT YV+PE+L +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASK 213
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N +++KI K EY P+ P + + +LL D
Sbjct: 214 SS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 273 ATKRLGCEEM 282
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++ GKI+G G+F+ V R + T + AIK + K+ I++ +V RE +MSRL HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGV 136
VKLY K+YF + +AK GEL I K G F E +R Y +++SA+EY H +G+
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG + V + GT YV+PE+L +K
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTD 256
+ D+W+ G +++ L AG PF N ++ KI K EY P+ P + + +LL D
Sbjct: 214 SS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 257 PATRITVDEI 266
R+ +E+
Sbjct: 273 ATKRLGCEEM 282
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 143/267 (53%), Gaps = 12/267 (4%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
++ +Y++ + IG GAF+ V + TG A K ++ +K L ++RE I
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKK-LSARDHQKLEREARICRL 59
Query: 73 LRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYC 131
L+H NIV+L++ ++ + Y V + GGELF I ++ +SE + QQ++ AV +C
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 132 HSRGVFHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
H GV HRD ++DFGL A++ Q GTP Y++PE+
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGL-AIEVQGDQQAWF-GFAGTPGYLSPEV 177
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPD 244
L K+ Y G VD+W+CGV+L++L GY PF D + +Y++I G Y P+W +P+
Sbjct: 178 LRKEAY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPE 236
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPW 271
K I ++L +PA RIT E L+ PW
Sbjct: 237 AKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 138/269 (51%), Gaps = 14/269 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILR--GGLTAHVKREISIMSRLRH 75
YE+ ++IG G F+ V N TGQ A+K V K G T +KRE SI L+H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSRRYFQQLISAVEY 130
P+IV+L E ++ +Y V EF G +L +I K +SE ++ Y +Q++ A+ Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 131 CHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLH-TLCGTPAYVAPEIL 189
CH + HRD G V Q+ G++ GTP ++APE++
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP--KWT--SPDL 245
++ Y G VD+W CGV+LF+L +G LPF ++ I KG+Y+ +W+ S
Sbjct: 206 KREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFKK 274
K + R+L DPA RITV E L PW K+
Sbjct: 264 KDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 138/269 (51%), Gaps = 14/269 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILR--GGLTAHVKREISIMSRLRH 75
YE+ ++IG G F+ V N TGQ A+K V K G T +KRE SI L+H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSRRYFQQLISAVEY 130
P+IV+L E ++ +Y V EF G +L +I K +SE ++ Y +Q++ A+ Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 131 CHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLH-TLCGTPAYVAPEIL 189
CH + HRD G V Q+ G++ GTP ++APE++
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP--KWT--SPDL 245
++ Y G VD+W CGV+LF+L +G LPF ++ I KG+Y+ +W+ S
Sbjct: 208 KREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESA 265
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFKK 274
K + R+L DPA RITV E L PW K+
Sbjct: 266 KDLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRF+E +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 143/281 (50%), Gaps = 20/281 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGL-----TAHVKREISIMS 71
+Y + K +G GA +V +T + VAI+ +SK+K G +V+ EI I+
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 209
Query: 72 RLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEY 130
+L HP I+K+ + Y V+E +GGELF K+ R E + YF Q++ AV+Y
Sbjct: 210 KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 131 CHSRGVFHRDXXXXXXXXXXXXX---XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
H G+ HRD I+DFG S + + ++ TLCGTP Y+APE
Sbjct: 269 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLAPE 325
Query: 188 ILAKKGYDGAK--VDMWSCGVVLFVLNAGYLPFNDPNL-MAMYRKIYKGEYR-CPK-WTS 242
+L G G VD WS GV+LF+ +GY PF++ +++ +I G+Y P+ W
Sbjct: 326 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE 385
Query: 243 PDLKW--FIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
K + +LL DP R T +E LR PW + + +RKF
Sbjct: 386 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 426
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRF E +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 143/281 (50%), Gaps = 20/281 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGL-----TAHVKREISIMS 71
+Y + K +G GA +V +T + VAI+ +SK+K G +V+ EI I+
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 195
Query: 72 RLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEY 130
+L HP I+K+ + Y V+E +GGELF K+ R E + YF Q++ AV+Y
Sbjct: 196 KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 131 CHSRGVFHRDXXXXXXXXXXXXX---XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
H G+ HRD I+DFG S + + ++ TLCGTP Y+APE
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI---LGETSLMRTLCGTPTYLAPE 311
Query: 188 ILAKKGYDGAK--VDMWSCGVVLFVLNAGYLPFNDPNL-MAMYRKIYKGEYR-CPK-WTS 242
+L G G VD WS GV+LF+ +GY PF++ +++ +I G+Y P+ W
Sbjct: 312 VLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE 371
Query: 243 PDLKW--FIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
K + +LL DP R T +E LR PW + + +RKF
Sbjct: 372 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 412
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRF E +R Y Q++ EY HS + +RD
Sbjct: 102 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 161
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 162 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 215
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 216 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 275
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 276 FGNLKNGVNDIKNHKWF 292
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRF E +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRF E +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 141/271 (52%), Gaps = 13/271 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y+ +++G G+F +V ++ TGQ A+K +SK+++ + + RE+ ++ +L HP
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NI+KLYE K Y V E GGELF + IS+ RFSE + R +Q++S + Y H
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 136 VFHRD---XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKK 192
+ HRD I DFGLS E + + GT Y+APE+L
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVL--H 225
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWF 248
G K D+WS GV+L++L +G PFN N + +K+ KG+Y P+W S K
Sbjct: 226 GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 285
Query: 249 IGRLLDTDPATRITVDEILRDPWFKKDYKER 279
I ++L P+ RI+ + L W + KE+
Sbjct: 286 IRKMLTYVPSMRISARDALDHEWIQTYTKEQ 316
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+AP I+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPAIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 141/271 (52%), Gaps = 13/271 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y+ +++G G+F +V ++ TGQ A+K +SK+++ + + RE+ ++ +L HP
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NI+KLYE K Y V E GGELF + IS+ RFSE + R +Q++S + Y H
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 136 VFHRD---XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKK 192
+ HRD I DFGLS E + + GT Y+APE+L
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVL--H 224
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWF 248
G K D+WS GV+L++L +G PFN N + +K+ KG+Y P+W S K
Sbjct: 225 GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 284
Query: 249 IGRLLDTDPATRITVDEILRDPWFKKDYKER 279
I ++L P+ RI+ + L W + KE+
Sbjct: 285 IRKMLTYVPSMRISARDALDHEWIQTYTKEQ 315
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 141/271 (52%), Gaps = 13/271 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y+ +++G G+F +V ++ TGQ A+K +SK+++ + + RE+ ++ +L HP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NI+KLYE K Y V E GGELF + IS+ RFSE + R +Q++S + Y H
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 136 VFHRD---XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKK 192
+ HRD I DFGLS E + + GT Y+APE+L
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK---MKDKIGTAYYIAPEVL--H 201
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWF 248
G K D+WS GV+L++L +G PFN N + +K+ KG+Y P+W S K
Sbjct: 202 GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 261
Query: 249 IGRLLDTDPATRITVDEILRDPWFKKDYKER 279
I ++L P+ RI+ + L W + KE+
Sbjct: 262 IRKMLTYVPSMRISARDALDHEWIQTYTKEQ 292
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRF E +R Y Q++ EY HS + +RD
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 241
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 301
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 302 FGNLKNGVNDIKNHKWF 318
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 138/266 (51%), Gaps = 14/266 (5%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y + ++G G+F +V ++ T Q A+K ++K + T+ + RE+ ++ +L HP
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHP 81
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
NI+KL+E+L + Y V E GGELF +I K RFSE + R +Q+ S + Y H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 136 VFHRDXXXXXXXXXXXXX---XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKK 192
+ HRD I DFGLS +Q + + GT Y+APE+L +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVL--R 196
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR--CPKW--TSPDLKWF 248
G K D+WS GV+L++L +G PF N + +++ G+Y P+W S D K
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 249 IGRLLDTDPATRITVDEILRDPWFKK 274
I ++L P+ RIT + L PW +K
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKA 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 140/274 (51%), Gaps = 14/274 (5%)
Query: 9 SREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREIS 68
S++ +L Y+ K +G GA+ +V R+ T AIK + K + + + E++
Sbjct: 30 SKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSS-NSKLLEEVA 88
Query: 69 IMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQQLISA 127
++ L HPNI+KLY+ K Y VME KGGELF + I + +F+E + +Q++S
Sbjct: 89 VLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSG 148
Query: 128 VEYCHSRGVFHRD---XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYV 184
V Y H + HRD I DFGLSAV E + + GT Y+
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK---MKERLGTAYYI 205
Query: 185 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR--CPKW-- 240
APE+L KK YD K D+WS GV+LF+L AGY PF + RK+ KG+Y P+W
Sbjct: 206 APEVLRKK-YD-EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKN 263
Query: 241 TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
S K I ++L D RI+ + L PW K+
Sbjct: 264 VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE 297
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G LCGTP +APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G L GTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 140/267 (52%), Gaps = 18/267 (6%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y++ + +G GAF+ V V GQ A ++ +K L ++RE I L+HP
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK-LSARDHQKLEREARICRLLKHP 70
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NIV+L++ ++ + Y + + GGELF I ++ +SE + QQ++ AV +CH G
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 136 VFHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHT---LCGTPAYVAPEIL 189
V HR+ ++DFGL+ I +G GTP Y++PE+L
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLA-----IEVEGEQQAWFGFAGTPGYLSPEVL 185
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDL 245
K Y G VD+W+CGV+L++L GY PF D + +Y++I G Y P+W +P+
Sbjct: 186 RKDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWF 272
K I ++L +P+ RIT E L+ PW
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 136/281 (48%), Gaps = 22/281 (7%)
Query: 2 GDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTA 61
G GDI++ Y + IG G++ +V T A K + K +
Sbjct: 1 GSTKGDINQ------YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VD 51
Query: 62 HVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRY 120
K+EI IM L HPNI++LYE IY VME GGELF ++ R F E + R
Sbjct: 52 RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARI 111
Query: 121 FQQLISAVEYCHSRGVFHRDXXXXX---XXXXXXXXXXISDFGLSAVKEQIRPDGMLHTL 177
+ ++SAV YCH V HRD + DFGL+A + +P M+ T
Sbjct: 112 MKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA---RFKPGKMMRTK 168
Query: 178 CGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRC 237
GTP YV+P++L +G G + D WS GV+++VL GY PF+ P + KI +G +
Sbjct: 169 VGTPYYVSPQVL--EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTF 226
Query: 238 PK--W--TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
P+ W SP + I RLL P RIT + L WF+K
Sbjct: 227 PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 136/281 (48%), Gaps = 22/281 (7%)
Query: 2 GDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTA 61
G GDI++ Y + IG G++ +V T A K + K +
Sbjct: 18 GSTKGDINQ------YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED---VD 68
Query: 62 HVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRY 120
K+EI IM L HPNI++LYE IY VME GGELF ++ R F E + R
Sbjct: 69 RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARI 128
Query: 121 FQQLISAVEYCHSRGVFHRDXXXXX---XXXXXXXXXXISDFGLSAVKEQIRPDGMLHTL 177
+ ++SAV YCH V HRD + DFGL+A + +P M+ T
Sbjct: 129 MKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA---RFKPGKMMRTK 185
Query: 178 CGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRC 237
GTP YV+P++L +G G + D WS GV+++VL GY PF+ P + KI +G +
Sbjct: 186 VGTPYYVSPQVL--EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTF 243
Query: 238 PK--W--TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
P+ W SP + I RLL P RIT + L WF+K
Sbjct: 244 PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 12/257 (4%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G+F +V ++ +G A+K + KQK+++ H E I+ + P +VKL
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ +Y VME+ GGE+F+ + + GRFSE +R Y Q++ EY HS + +RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFG + R G L GTP Y+APEI+ KGY+ A VD
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEIILSKGYNKA-VD 220
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+++ + AGY PF + +Y KI G+ R P S DLK + LL D R
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280
Query: 261 I-----TVDEILRDPWF 272
V++I WF
Sbjct: 281 FGNLKNGVNDIKNHKWF 297
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 128/247 (51%), Gaps = 5/247 (2%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K++G G F KV + TG+ A+K + K+ I+ AH E ++ RHP
Sbjct: 9 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 68
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHS-R 134
+ L T ++ FVME+A GGELF +S+ R FSE +R Y +++SA++Y HS +
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 128
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
V +RD I+DFGL KE I+ + CGTP Y+APE+L Y
Sbjct: 129 NVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 186
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLD 254
G VD W GVV++ + G LPF + + ++ I E R P+ P+ K + LL
Sbjct: 187 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 245
Query: 255 TDPATRI 261
DP R+
Sbjct: 246 KDPKQRL 252
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 128/247 (51%), Gaps = 5/247 (2%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K++G G F KV + TG+ A+K + K+ I+ AH E ++ RHP
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 70
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHS-R 134
+ L T ++ FVME+A GGELF +S+ R FSE +R Y +++SA++Y HS +
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 130
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
V +RD I+DFGL KE I+ + CGTP Y+APE+L Y
Sbjct: 131 NVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 188
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLD 254
G VD W GVV++ + G LPF + + ++ I E R P+ P+ K + LL
Sbjct: 189 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 247
Query: 255 TDPATRI 261
DP R+
Sbjct: 248 KDPKQRL 254
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 139/278 (50%), Gaps = 12/278 (4%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT----AHVKREISI 69
L GKY +G ++G G++ KV + V +++ +AV K + A+VK+EI +
Sbjct: 3 LIGKYLMGDLLGEGSYGKV---KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQL 59
Query: 70 MSRLRHPNIVKLYEVLAT--KAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLI 125
+ RLRH N+++L +VL K K+Y VME+ G E+ + + RF + YF QLI
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLI 119
Query: 126 SAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
+EY HS+G+ H+D IS G++ D T G+PA+
Sbjct: 120 DGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 186 PEIL-AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPD 244
PEI + G KVD+WS GV L+ + G PF N+ ++ I KG Y P P
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPP 239
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
L + +L+ +PA R ++ +I + WF+K + + P
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAP 277
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 128/247 (51%), Gaps = 5/247 (2%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
++E K++G G F KV + TG+ A+K + K+ I+ AH E ++ RHP
Sbjct: 10 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 69
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHS-R 134
+ L T ++ FVME+A GGELF +S+ R FSE +R Y +++SA++Y HS +
Sbjct: 70 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 129
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
V +RD I+DFGL KE I+ + CGTP Y+APE+L Y
Sbjct: 130 NVVYRDLKLENLMLDKDGHIKITDFGL--CKEGIKDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLD 254
G VD W GVV++ + G LPF + + ++ I E R P+ P+ K + LL
Sbjct: 188 -GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLK 246
Query: 255 TDPATRI 261
DP R+
Sbjct: 247 KDPKQRL 253
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 138/266 (51%), Gaps = 14/266 (5%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y + ++G G+F +V ++ T Q A+K ++K + T+ + RE+ ++ +L HP
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHP 81
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
NI+KL+E+L + Y V E GGELF +I K RFSE + R +Q+ S + Y H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 136 VFHRDXXXXXXXXXXXXX---XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKK 192
+ HRD I DFGLS +Q + + GT Y+APE+L +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVL--R 196
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR--CPKW--TSPDLKWF 248
G K D+WS GV+L++L +G PF N + +++ G+Y P+W S D K
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 249 IGRLLDTDPATRITVDEILRDPWFKK 274
I ++L P+ RIT + L PW +K
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 139/271 (51%), Gaps = 13/271 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y+ +++G G+F +V ++ TGQ A+K +SK+++ + + RE+ ++ +L HP
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NI+KLYE K Y V E GGELF + IS+ RFSE + R +Q++S + Y H
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 136 VFHRDXX---XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKK 192
+ HRD I DFGLS + GT Y+APE+L
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLST---HFEASKKMKDKIGTAYYIAPEVL--H 207
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWF 248
G K D+WS GV+L++L +G PFN N + +K+ KG+Y P+W S K
Sbjct: 208 GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 267
Query: 249 IGRLLDTDPATRITVDEILRDPWFKKDYKER 279
I ++L P+ RI+ + L W + KE+
Sbjct: 268 IRKMLTYVPSMRISARDALDHEWIQTYTKEQ 298
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 138/266 (51%), Gaps = 14/266 (5%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y + ++G G+F +V ++ T Q A+K ++K + T+ + RE+ ++ +L HP
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHP 81
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG 135
NI+KL+E+L + Y V E GGELF +I K RFSE + R +Q+ S + Y H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 136 VFHRDXXXXXXXXXXXXX---XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKK 192
+ HRD I DFGLS +Q + + GT Y+APE+L +
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVL--R 196
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR--CPKW--TSPDLKWF 248
G K D+WS GV+L++L +G PF N + +++ G+Y P+W S D K
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 249 IGRLLDTDPATRITVDEILRDPWFKK 274
I ++L P+ RIT + L PW +K
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 136/271 (50%), Gaps = 13/271 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y+ +++G G+F +V ++ TGQ A+K +SK+++ + + RE+ ++ +L HP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NI KLYE K Y V E GGELF + IS+ RFSE + R +Q++S + Y H
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 136 VFHRD---XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKK 192
+ HRD I DFGLS GT Y+APE+L
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLST---HFEASKKXKDKIGTAYYIAPEVL--H 201
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWF 248
G K D+WS GV+L++L +G PFN N + +K+ KG+Y P+W S K
Sbjct: 202 GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDL 261
Query: 249 IGRLLDTDPATRITVDEILRDPWFKKDYKER 279
I + L P+ RI+ + L W + KE+
Sbjct: 262 IRKXLTYVPSXRISARDALDHEWIQTYTKEQ 292
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 135/279 (48%), Gaps = 8/279 (2%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKRE 66
D+ + +Y G+ +G G FAK Y ++ T + A K V K +L+ + E
Sbjct: 33 DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTE 92
Query: 67 ISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQL 124
I+I L +P++V + +Y V+E + L ++ K R +E +R + +Q
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQT 151
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAY 183
I V+Y H+ V HRD I DFGL+ +I DG TLCGTP Y
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT---KIEFDGERKKTLCGTPNY 208
Query: 184 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSP 243
+APE+L KKG+ +VD+WS G +L+ L G PF L Y +I K EY P+ +P
Sbjct: 209 IAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINP 267
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
I R+L DP R +V E+L D +F Y + P
Sbjct: 268 VASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 144/289 (49%), Gaps = 21/289 (7%)
Query: 3 DNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIK--AVSKQKILRGGLT 60
D D + + KY+ +IG G + V + TG A+K V+ +++ L
Sbjct: 81 DELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLE 140
Query: 61 A---HVKREISIMSRLR-HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQ 115
+RE I+ ++ HP+I+ L + + + ++ V + + GELF ++ K SE+
Sbjct: 141 EVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEK 200
Query: 116 LSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLH 175
+R + L+ AV + H+ + HRD +SDFG S + P L
Sbjct: 201 ETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSC---HLEPGEKLR 257
Query: 176 TLCGTPAYVAPEIL------AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRK 229
LCGTP Y+APEIL GY G +VD+W+CGV+LF L AG PF + M R
Sbjct: 258 ELCGTPGYLAPEILKCSMDETHPGY-GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM 316
Query: 230 IYKGEYR--CPKWT--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
I +G+Y+ P+W S +K I RLL DP R+T ++ L+ P+F++
Sbjct: 317 IMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 8/279 (2%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKRE 66
D+ + +Y G+ +G G FAK Y ++ T + A K V K +L+ + E
Sbjct: 17 DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTE 76
Query: 67 ISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQL 124
I+I L +P++V + +Y V+E + L ++ K R +E +R + +Q
Sbjct: 77 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQT 135
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT-LCGTPAY 183
I V+Y H+ V HRD I DFGL+ +I DG LCGTP Y
Sbjct: 136 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT---KIEFDGERKKDLCGTPNY 192
Query: 184 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSP 243
+APE+L KKG+ +VD+WS G +L+ L G PF L Y +I K EY P+ +P
Sbjct: 193 IAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINP 251
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
I R+L DP R +V E+L D +F Y + P
Sbjct: 252 VASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 290
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 8/279 (2%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKRE 66
D+ + +Y G+ +G G FAK Y ++ T + A K V K +L+ + E
Sbjct: 33 DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTE 92
Query: 67 ISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQL 124
I+I L +P++V + +Y V+E + L ++ K R +E +R + +Q
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQT 151
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAY 183
I V+Y H+ V HRD I DFGL+ +I DG LCGTP Y
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT---KIEFDGERKKXLCGTPNY 208
Query: 184 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSP 243
+APE+L KKG+ +VD+WS G +L+ L G PF L Y +I K EY P+ +P
Sbjct: 209 IAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINP 267
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
I R+L DP R +V E+L D +F Y + P
Sbjct: 268 VASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 134/279 (48%), Gaps = 8/279 (2%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKRE 66
D+ + +Y G+ +G G FAK Y ++ T + A K V K +L+ + E
Sbjct: 33 DVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTE 92
Query: 67 ISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQL 124
I+I L +P++V + +Y V+E + L ++ K R +E +R + +Q
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL-ELHKRRKAVTEPEARYFMRQT 151
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT-LCGTPAY 183
I V+Y H+ V HRD I DFGL+ +I DG LCGTP Y
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLAT---KIEFDGERKKDLCGTPNY 208
Query: 184 VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSP 243
+APE+L KKG+ +VD+WS G +L+ L G PF L Y +I K EY P+ +P
Sbjct: 209 IAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINP 267
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
I R+L DP R +V E+L D +F Y + P
Sbjct: 268 VASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 133/289 (46%), Gaps = 31/289 (10%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRG----------------- 57
+Y + IG G++ V N A+K +SK+K++R
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 58 ------GLTAHVKREISIMSRLRHPNIVKLYEVL--ATKAKIYFVMEFAKGGELFAKISK 109
G V +EI+I+ +L HPN+VKL EVL + +Y V E G + +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 110 GRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIR 169
SE +R YFQ LI +EY H + + HRD I+DFG+S E
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS--NEFKG 189
Query: 170 PDGMLHTLCGTPAYVAPEILA--KKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMY 227
D +L GTPA++APE L+ +K + G +D+W+ GV L+ G PF D +M ++
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLH 249
Query: 228 RKIYKGEYRCPKW--TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
KI P + DLK I R+LD +P +RI V EI PW +
Sbjct: 250 SKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 140/268 (52%), Gaps = 12/268 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I + L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINAMLNHEN 66
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 243
Query: 251 RLLDTDPATRITVDEILRDPWFKKDYKE 278
++L +P+ RIT+ +I +D W+ K K+
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKK 271
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 128/265 (48%), Gaps = 11/265 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-HP 76
+E +++G G+F KV R TG A+K + K IL+ E I+S R HP
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRG 135
+ +L+ T +++FVMEF GG+L I K R F E +R Y ++ISA+ + H +G
Sbjct: 85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG 144
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++DFG+ KE I T CGTP Y+APEIL + Y
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADFGMC--KEGICNGVTTATFCGTPDYIAPEILQEMLY- 201
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
G VD W+ GV+L+ + G+ PF N ++ I E P W D + +
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTK 261
Query: 256 DPATRITV------DEILRDPWFKK 274
+P R+ ILR P+FK+
Sbjct: 262 NPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 137/266 (51%), Gaps = 13/266 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVSKQKILRGGL-TAHVKREISIMSRL 73
+E+ +++G G + KV+ R V TG+ A+K + K I+R TAH K E +I+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCH 132
+HP IV L T K+Y ++E+ GGELF ++ + G F E + Y ++ A+ + H
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKK 192
+G+ +RD ++DFGL KE I + HT CGT Y+APEIL +
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGL--CKESIHDGTVTHTFCGTIEYMAPEILMRS 196
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
G++ A VD WS G +++ + G PF N KI K + P + + + + + +L
Sbjct: 197 GHNRA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKL 255
Query: 253 LDTDPATRI-----TVDEILRDPWFK 273
L + A+R+ E+ P+F+
Sbjct: 256 LKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 12/268 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 242
Query: 251 RLLDTDPATRITVDEILRDPWFKKDYKE 278
++L +P+ RIT+ +I +D W+ K K+
Sbjct: 243 KILVENPSARITIPDIKKDRWYNKPLKK 270
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 138/267 (51%), Gaps = 12/267 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 242
Query: 251 RLLDTDPATRITVDEILRDPWFKKDYK 277
++L +P+ RIT+ +I +D W+ K K
Sbjct: 243 KILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 12/268 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 242
Query: 251 RLLDTDPATRITVDEILRDPWFKKDYKE 278
++L +P+ RIT+ +I +D W+ K K+
Sbjct: 243 KILVENPSARITIPDIKKDRWYNKPLKK 270
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 138/266 (51%), Gaps = 8/266 (3%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLNHEN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE--YRCPKWTSPDLK--WFIGRL 252
VD+WSCG+VL + AG LP++ P+ +K + Y P W D + ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLHKI 244
Query: 253 LDTDPATRITVDEILRDPWFKKDYKE 278
L +P+ RIT+ +I +D W+ K K+
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKK 270
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 12/268 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 242
Query: 251 RLLDTDPATRITVDEILRDPWFKKDYKE 278
++L +P+ RIT+ +I +D W+ K K+
Sbjct: 243 KILVENPSARITIPDIKKDRWYNKPLKK 270
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 12/268 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 64
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 124
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 241
Query: 251 RLLDTDPATRITVDEILRDPWFKKDYKE 278
++L +P+ RIT+ +I +D W+ K K+
Sbjct: 242 KILVENPSARITIPDIKKDRWYNKPLKK 269
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 12/268 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 66
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 243
Query: 251 RLLDTDPATRITVDEILRDPWFKKDYKE 278
++L +P+ RIT+ +I +D W+ K K+
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKK 271
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 138/266 (51%), Gaps = 8/266 (3%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE--YRCPKWTSPDLK--WFIGRL 252
VD+WSCG+VL + AG LP++ P+ +K + Y P W D + ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLHKI 244
Query: 253 LDTDPATRITVDEILRDPWFKKDYKE 278
L +P+ RIT+ +I +D W+ K K+
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKK 270
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 12/268 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 66
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 243
Query: 251 RLLDTDPATRITVDEILRDPWFKKDYKE 278
++L +P+ RIT+ +I +D W+ K K+
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKK 271
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 136/262 (51%), Gaps = 12/262 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y++ + +G GAF+ V Q A K ++ +K L ++RE I L+HPN
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKK-LSARDHQKLEREARICRLLKHPN 91
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
IV+L++ ++ + Y V + GGELF I ++ +SE + Q++ +V + H +
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDI 151
Query: 137 FHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
HRD ++DFGL A++ Q GTP Y++PE+L K
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGL-AIEVQGEQQAWF-GFAGTPGYLSPEVLRKDP 209
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY--RCPKW--TSPDLKWFI 249
Y G VD+W+CGV+L++L GY PF D + +Y++I G Y P+W +P+ K I
Sbjct: 210 Y-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLI 268
Query: 250 GRLLDTDPATRITVDEILRDPW 271
++L +PA RIT D+ L+ PW
Sbjct: 269 NQMLTINPAKRITADQALKHPW 290
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 12/268 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 66
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 243
Query: 251 RLLDTDPATRITVDEILRDPWFKKDYKE 278
++L +P+ RIT+ +I +D W+ K K+
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKK 271
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 12/268 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 66
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 243
Query: 251 RLLDTDPATRITVDEILRDPWFKKDYKE 278
++L +P+ RIT+ +I +D W+ K K+
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKK 271
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 12/268 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 66
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 243
Query: 251 RLLDTDPATRITVDEILRDPWFKKDYKE 278
++L +P+ RIT+ +I +D W+ K K+
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKK 271
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 137/264 (51%), Gaps = 12/264 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 242
Query: 251 RLLDTDPATRITVDEILRDPWFKK 274
++L +P+ RIT+ +I +D W+ K
Sbjct: 243 KILVENPSARITIPDIKKDRWYNK 266
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 137/264 (51%), Gaps = 12/264 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 66
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 243
Query: 251 RLLDTDPATRITVDEILRDPWFKK 274
++L +P+ RIT+ +I +D W+ K
Sbjct: 244 KILVENPSARITIPDIKKDRWYNK 267
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 128/262 (48%), Gaps = 8/262 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G FAK + + T + A K V K +L+ + EISI L H ++V +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
++ V+E + L ++ K R +E +R Y +Q++ +Y H V HRD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I DFGL+ ++ DG TLCGTP Y+APE+L+KKG+ +VD
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLSKKGH-SFEVD 199
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
+WS G +++ L G PF L Y +I K EY PK +P I ++L TDP R
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 259
Query: 261 ITVDEILRDPWFKKDYKERKFP 282
T++E+L D +F Y + P
Sbjct: 260 PTINELLNDEFFTSGYIPARLP 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 128/262 (48%), Gaps = 8/262 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G FAK + + T + A K V K +L+ + EISI L H ++V +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
++ V+E + L ++ K R +E +R Y +Q++ +Y H V HRD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I DFGL+ ++ DG TLCGTP Y+APE+L+KKG+ +VD
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLSKKGH-SFEVD 199
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
+WS G +++ L G PF L Y +I K EY PK +P I ++L TDP R
Sbjct: 200 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 259
Query: 261 ITVDEILRDPWFKKDYKERKFP 282
T++E+L D +F Y + P
Sbjct: 260 PTINELLNDEFFTSGYIPARLP 281
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 128/262 (48%), Gaps = 8/262 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G FAK + + T + A K V K +L+ + EISI L H ++V +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
++ V+E + L ++ K R +E +R Y +Q++ +Y H V HRD
Sbjct: 89 FFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I DFGL+ ++ DG TLCGTP Y+APE+L+KKG+ +VD
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKTLCGTPNYIAPEVLSKKGH-SFEVD 203
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
+WS G +++ L G PF L Y +I K EY PK +P I ++L TDP R
Sbjct: 204 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 263
Query: 261 ITVDEILRDPWFKKDYKERKFP 282
T++E+L D +F Y + P
Sbjct: 264 PTINELLNDEFFTSGYIPARLP 285
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 138/268 (51%), Gaps = 12/268 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ +CGT YVAPE+L ++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAM------YRKIYKGEYRCPKWTSPDLKWFIG 250
VD+WSCG+VL + AG LP++ P+ +K Y ++ K S L +
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWK--KIDSAPLA-LLH 242
Query: 251 RLLDTDPATRITVDEILRDPWFKKDYKE 278
++L +P+ RIT+ +I +D W+ K K+
Sbjct: 243 KILVENPSARITIPDIKKDRWYNKPLKK 270
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 136/266 (51%), Gaps = 13/266 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVSKQKILRGGL-TAHVKREISIMSRL 73
+E+ +++G G + KV+ R V TG+ A+K + K I+R TAH K E +I+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCH 132
+HP IV L T K+Y ++E+ GGELF ++ + G F E + Y ++ A+ + H
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKK 192
+G+ +RD ++DFGL KE I + H CGT Y+APEIL +
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGL--CKESIHDGTVTHXFCGTIEYMAPEILMRS 196
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
G++ A VD WS G +++ + G PF N KI K + P + + + + + +L
Sbjct: 197 GHNRA-VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKL 255
Query: 253 LDTDPATRI-----TVDEILRDPWFK 273
L + A+R+ E+ P+F+
Sbjct: 256 LKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 127/262 (48%), Gaps = 8/262 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G FAK + + T + A K V K +L+ + EISI L H ++V +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
++ V+E + L ++ K R +E +R Y +Q++ +Y H V HRD
Sbjct: 109 FFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I DFGL+ ++ DG LCGTP Y+APE+L+KKG+ +VD
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKVLCGTPNYIAPEVLSKKGH-SFEVD 223
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
+WS G +++ L G PF L Y +I K EY PK +P I ++L TDP R
Sbjct: 224 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 283
Query: 261 ITVDEILRDPWFKKDYKERKFP 282
T++E+L D +F Y + P
Sbjct: 284 PTINELLNDEFFTSGYIPARLP 305
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 127/262 (48%), Gaps = 8/262 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G FAK + + T + A K V K +L+ + EISI L H ++V +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
++ V+E + L ++ K R +E +R Y +Q++ +Y H V HRD
Sbjct: 107 FFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I DFGL+ ++ DG LCGTP Y+APE+L+KKG+ +VD
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKVLCGTPNYIAPEVLSKKGH-SFEVD 221
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
+WS G +++ L G PF L Y +I K EY PK +P I ++L TDP R
Sbjct: 222 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 281
Query: 261 ITVDEILRDPWFKKDYKERKFP 282
T++E+L D +F Y + P
Sbjct: 282 PTINELLNDEFFTSGYIPARLP 303
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 127/262 (48%), Gaps = 8/262 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G FAK + + T + A K V K +L+ + EISI L H ++V +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
++ V+E + L ++ K R +E +R Y +Q++ +Y H V HRD
Sbjct: 83 FFEDNDFVFVVLELCRRRSLL-ELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I DFGL+ ++ DG LCGTP Y+APE+L+KKG+ +VD
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLAT---KVEYDGERKKVLCGTPNYIAPEVLSKKGH-SFEVD 197
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
+WS G +++ L G PF L Y +I K EY PK +P I ++L TDP R
Sbjct: 198 VWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTAR 257
Query: 261 ITVDEILRDPWFKKDYKERKFP 282
T++E+L D +F Y + P
Sbjct: 258 PTINELLNDEFFTSGYIPARLP 279
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 127/269 (47%), Gaps = 23/269 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT----------AHVKREISIMSRL 73
+G GA+ +V + AIK + K + +G + + EIS++ L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAK-ISKGRFSEQLSRRYFQQLISAVEYCH 132
HPNI+KL++V K Y V EF +GGELF + I++ +F E + +Q++S + Y H
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH 163
Query: 133 SRGVFHRD---XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEIL 189
+ HRD I DFGLS+ D L GT Y+APE+L
Sbjct: 164 KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF---FSKDYKLRDRLGTAYYIAPEVL 220
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP----KWTSPDL 245
KK K D+WSCGV++++L GY PF N + +K+ KG+Y K S +
Sbjct: 221 KKKY--NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEA 278
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFKK 274
K I +L D R T +E L W KK
Sbjct: 279 KELIKLMLTYDYNKRCTAEEALNSRWIKK 307
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 140/265 (52%), Gaps = 11/265 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKA--VSKQKILRGGLTAHVKREISIMSRL 73
++E+ K++G G+F KV+ + + + + A V K+ L+ K E I+ +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCH 132
HP IVKL+ T+ K+Y +++F +GG+LF ++SK F+E+ + Y +L A+++ H
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKK 192
S G+ +RD ++DFGLS KE I + ++ CGT Y+APE++ ++
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLS--KESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
G+ + D WS GV++F + G LPF + I K + P++ SP+ + + L
Sbjct: 202 GHTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRML 260
Query: 253 LDTDPATRI-----TVDEILRDPWF 272
+PA R+ V+EI R +F
Sbjct: 261 FKRNPANRLGAGPDGVEEIKRHSFF 285
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 140/264 (53%), Gaps = 11/264 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKA--VSKQKILRGGLTAHVKREISIMSRLR 74
++E+ K++G G+F KV+ + + + + A V K+ L+ K E I+ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHS 133
HP IVKL+ T+ K+Y +++F +GG+LF ++SK F+E+ + Y +L A+++ HS
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
G+ +RD ++DFGLS KE I + ++ CGT Y+APE++ ++G
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLS--KESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLL 253
+ + D WS GV++F + G LPF + I K + P++ SP+ + + L
Sbjct: 203 HTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLF 261
Query: 254 DTDPATRI-----TVDEILRDPWF 272
+PA R+ V+EI R +F
Sbjct: 262 KRNPANRLGAGPDGVEEIKRHSFF 285
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 137/266 (51%), Gaps = 8/266 (3%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ + GT YVAPE+L ++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE--YRCPKWTSPDLK--WFIGRL 252
VD+WSCG+VL + AG LP++ P+ +K + Y P W D + ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLHKI 244
Query: 253 LDTDPATRITVDEILRDPWFKKDYKE 278
L +P+ RIT+ +I +D W+ K K+
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKK 270
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 137/265 (51%), Gaps = 8/265 (3%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ + GT YVAPE+L ++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE--YRCP--KWTSPDLKWFIGRL 252
VD+WSCG+VL + AG LP++ P+ +K + Y P K S L + ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA-LLHKI 244
Query: 253 LDTDPATRITVDEILRDPWFKKDYK 277
L +P+ RIT+ +I +D W+ K K
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLK 269
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 137/266 (51%), Gaps = 8/266 (3%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLNHEN 66
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ + GT YVAPE+L ++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE--YRCPKWTSPDLK--WFIGRL 252
VD+WSCG+VL + AG LP++ P+ +K + Y P W D + ++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLHKI 245
Query: 253 LDTDPATRITVDEILRDPWFKKDYKE 278
L +P+ RIT+ +I +D W+ K K+
Sbjct: 246 LVENPSARITIPDIKKDRWYNKPLKK 271
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 140/264 (53%), Gaps = 11/264 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKA--VSKQKILRGGLTAHVKREISIMSRLR 74
++E+ K++G G+F KV+ + + + + A V K+ L+ K E I+ +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHS 133
HP IVKL+ T+ K+Y +++F +GG+LF ++SK F+E+ + Y +L A+++ HS
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
G+ +RD ++DFGLS KE I + ++ CGT Y+APE++ ++G
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLS--KESIDHEKKAYSFCGTVEYMAPEVVNRRG 203
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLL 253
+ + D WS GV++F + G LPF + I K + P++ SP+ + + L
Sbjct: 204 HTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLF 262
Query: 254 DTDPATRI-----TVDEILRDPWF 272
+PA R+ V+EI R +F
Sbjct: 263 KRNPANRLGAGPDGVEEIKRHSFF 286
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 137/266 (51%), Gaps = 8/266 (3%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLNHEN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ + GT YVAPE+L ++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE--YRCPKWTSPDLK--WFIGRL 252
VD+WSCG+VL + AG LP++ P+ +K + Y P W D + ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP-WKKIDSAPLALLHKI 244
Query: 253 LDTDPATRITVDEILRDPWFKKDYKE 278
L +P+ RIT+ +I +D W+ K K+
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKK 270
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 137/266 (51%), Gaps = 8/266 (3%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+++ + +G GA+ +V N T ++VA+K V ++ + ++K+EI I L H N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHEN 65
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGV 136
+VK Y Y +E+ GGELF +I E ++R+F QL++ V Y H G+
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD ISDFGL+ V + +L+ + GT YVAPE+L ++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE--YRCPKWTSPDLK--WFIGRL 252
VD+WSCG+VL + AG LP++ P+ +K + Y P W D + ++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNP-WKKIDSAPLALLHKI 244
Query: 253 LDTDPATRITVDEILRDPWFKKDYKE 278
L +P+ RIT+ +I +D W+ K K+
Sbjct: 245 LVENPSARITIPDIKKDRWYNKPLKK 270
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 137/280 (48%), Gaps = 16/280 (5%)
Query: 6 GDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAH 62
G + R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG
Sbjct: 1 GTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 63 VKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYF 121
++RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 122 QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTL 177
+Q+++ V Y HS + H D I DFGL+ +I +
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 178 CGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKG 233
GTP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+
Sbjct: 178 FGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 234 EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
E TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 137/280 (48%), Gaps = 16/280 (5%)
Query: 6 GDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAH 62
G + R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG
Sbjct: 1 GTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 63 VKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYF 121
++RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 122 QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTL 177
+Q+++ V Y HS + H D I DFGL+ +I +
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNI 177
Query: 178 CGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKG 233
GTP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+
Sbjct: 178 FGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236
Query: 234 EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
E TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 137/278 (49%), Gaps = 16/278 (5%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVK 64
+ R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG ++
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQ 123
RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + + +Q
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCG 179
+++ V Y HS + H D I DFGL+ +I + G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFG 179
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEY 235
TPA+VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+ E
Sbjct: 180 TPAFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 236 RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 16/278 (5%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVK 64
+ R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG ++
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQ 123
RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + + +Q
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCG 179
+++ V Y HS + H D I DFGL+ +I + G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFG 179
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEY 235
TP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+ E
Sbjct: 180 TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 236 RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 16/278 (5%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVK 64
+ R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG ++
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQ 123
RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + + +Q
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCG 179
+++ V Y HS + H D I DFGL+ +I + G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFG 179
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEY 235
TP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+ E
Sbjct: 180 TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 236 RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 16/278 (5%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVK 64
+ R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG ++
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQ 123
RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + + +Q
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCG 179
+++ V Y HS + H D I DFGL+ +I + G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFG 179
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEY 235
TP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+ E
Sbjct: 180 TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 236 RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 16/278 (5%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVK 64
+ R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG ++
Sbjct: 2 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 61
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQ 123
RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + + +Q
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCG 179
+++ V Y HS + H D I DFGL+ +I + G
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFG 178
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEY 235
TP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+ E
Sbjct: 179 TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 236 RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 16/278 (5%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVK 64
+ R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG ++
Sbjct: 2 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 61
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQ 123
RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + + +Q
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCG 179
+++ V Y HS + H D I DFGL+ +I + G
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFG 178
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEY 235
TP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+ E
Sbjct: 179 TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 236 RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 16/278 (5%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVK 64
+ R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG ++
Sbjct: 3 VFRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQ 123
RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + + +Q
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCG 179
+++ V Y HS + H D I DFGL+ +I + G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFG 179
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEY 235
TP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+ E
Sbjct: 180 TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 236 RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 16/278 (5%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVK 64
+ R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG ++
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQ 123
RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + + +Q
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCG 179
+++ V Y HS + H D I DFGL+ +I + G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFG 179
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEY 235
TP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+ E
Sbjct: 180 TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 236 RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 16/278 (5%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVK 64
+ R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG ++
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQ 123
RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + + +Q
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCG 179
+++ V Y HS + H D I DFGL+ +I + G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFG 179
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEY 235
TP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+ E
Sbjct: 180 TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 236 RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 16/278 (5%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVK 64
+ R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG ++
Sbjct: 3 VFRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQ 123
RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + + +Q
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCG 179
+++ V Y HS + H D I DFGL+ +I + G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFG 179
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEY 235
TP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+ E
Sbjct: 180 TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 236 RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 136/278 (48%), Gaps = 16/278 (5%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVK 64
+ R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG ++
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQ 123
RE+SI+ ++HPN++ L+EV K + ++E GGELF ++ K +E+ + + +Q
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCG 179
+++ V Y HS + H D I DFGL+ +I + G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFG 179
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEY 235
TP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+ E
Sbjct: 180 TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 236 RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 133/248 (53%), Gaps = 8/248 (3%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVR---TGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
+E+ K++G G+F KV+ R V +G A+K V K+ L+ K E I++ +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMK-VLKKATLKVRDRVRTKMERDILADVN 88
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLISAVEYCHS 133
HP +VKL+ T+ K+Y +++F +GG+LF ++SK F+E+ + Y +L +++ HS
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
G+ +RD ++DFGLS KE I + ++ CGT Y+APE++ ++G
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLS--KEAIDHEKKAYSFCGTVEYMAPEVVNRQG 206
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLL 253
+ + D WS GV++F + G LPF + I K + P++ S + + + L
Sbjct: 207 HSHS-ADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALF 265
Query: 254 DTDPATRI 261
+PA R+
Sbjct: 266 KRNPANRL 273
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 140/287 (48%), Gaps = 27/287 (9%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-RHP 76
Y V + IG G++++ + T A+K + K K EI I+ R +HP
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRG 135
NI+ L +V +Y V E +GGEL KI + + FSE+ + + VEY HS+G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 136 VFHRDXXXXXXXXXXXX----XXXISDFGLSAVKEQIRPD-GMLHTLCGTPAYVAPEILA 190
V HRD I DFG + +Q+R + G+L T C T +VAPE+L
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFA---KQLRAENGLLMTPCYTANFVAPEVLK 198
Query: 191 KKGYDGAKVDMWSCGVVLFVLNAGYLPF-NDPNLMA--MYRKIYKGEYRCP--KW--TSP 243
++GYD D+WS G++L+ + AGY PF N P+ + +I G++ W S
Sbjct: 199 RQGYDEG-CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKDYK--ERKFPHEDFDL 288
K + ++L DP R+T ++L+ PW + K + + H+D L
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQL 304
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 140/287 (48%), Gaps = 27/287 (9%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-RHP 76
Y V + IG G++++ + T A+K + K K EI I+ R +HP
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRG 135
NI+ L +V +Y V E +GGEL KI + + FSE+ + + VEY HS+G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 136 VFHRDXXXXXXXXXXXX----XXXISDFGLSAVKEQIRPD-GMLHTLCGTPAYVAPEILA 190
V HRD I DFG + +Q+R + G+L T C T +VAPE+L
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFA---KQLRAENGLLMTPCYTANFVAPEVLK 198
Query: 191 KKGYDGAKVDMWSCGVVLFVLNAGYLPF-NDPNLMA--MYRKIYKGEYRCP--KW--TSP 243
++GYD D+WS G++L+ + AGY PF N P+ + +I G++ W S
Sbjct: 199 RQGYDEG-CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKKDYK--ERKFPHEDFDL 288
K + ++L DP R+T ++L+ PW + K + + H+D L
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQL 304
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 135/278 (48%), Gaps = 16/278 (5%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVK 64
+ R+ N+ Y+ G+ +G G FA V R TG A K + K++ RG ++
Sbjct: 3 VFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 65 REISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQ 123
RE+SI+ ++HPN++ L+EV K + + E GGELF ++ K +E+ + + +Q
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCG 179
+++ V Y HS + H D I DFGL+ +I + G
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA---HKIDFGNEFKNIFG 179
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEY 235
TP +VAPEI+ + G + DMWS GV+ ++L +G PF L + Y+ E
Sbjct: 180 TPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 236 RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+T+ + L+ PW K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 130/268 (48%), Gaps = 16/268 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKIL---RGGLTAHVKREISIMSRLR 74
YE+G+ +G G FA V R TG+ A K + K+++ RG ++RE++I+ +R
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQLISAVEYCHS 133
HPNI+ L+++ K + ++E GGELF ++ K +E + ++ +Q++ V Y HS
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 134 RGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEIL 189
+ + H D + DFG++ +I + GTP +VAPEI+
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA---HKIEAGNEFKNIFGTPEFVAPEIV 183
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKW----TSPDL 245
+ G + DMWS GV+ ++L +G PF I Y + TS
Sbjct: 184 NYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA 242
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
K FI RLL DP R+T+ + L W K
Sbjct: 243 KDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 129/268 (48%), Gaps = 16/268 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKIL---RGGLTAHVKREISIMSRLR 74
YE+G+ +G G FA V R TG+ A K + K+++ RG ++RE++I+ +R
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQLISAVEYCHS 133
HPNI+ L+++ K + ++E GGELF ++ K +E + ++ +Q++ V Y HS
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 134 RGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEIL 189
+ + H D + DFG++ +I + GTP +VAPEI+
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA---HKIEAGNEFKNIFGTPEFVAPEIV 204
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKW----TSPDL 245
+ G + DMWS GV+ ++L +G PF I Y + TS
Sbjct: 205 NYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA 263
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
K FI RLL DP R+ + + L W K
Sbjct: 264 KDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 133/276 (48%), Gaps = 16/276 (5%)
Query: 10 REVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKIL---RGGLTAHVKRE 66
R+ ++ YE+G+ +G G FA V R TG+ A K + K+++ RG ++RE
Sbjct: 6 RQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIERE 65
Query: 67 ISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQLI 125
++I+ +RHPNI+ L+++ K + ++E GGELF ++ K +E + ++ +Q++
Sbjct: 66 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 125
Query: 126 SAVEYCHSRGVFHRDXXXXXXXXXXXXX----XXISDFGLSAVKEQIRPDGMLHTLCGTP 181
V Y HS+ + H D + DFG++ +I + GTP
Sbjct: 126 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA---HKIEAGNEFKNIFGTP 182
Query: 182 AYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKW- 240
+VAPEI+ + G + DMWS GV+ ++L +G PF I Y +
Sbjct: 183 EFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY 241
Query: 241 ---TSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
TS K FI RLL DP R+ + + L W K
Sbjct: 242 FSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 119/242 (49%), Gaps = 5/242 (2%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR-LRHPNIVK 80
K+IG G+F KV R+ A+K + K+ IL+ H+ E +++ + ++HP +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 81 LYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRGVFHR 139
L+ T K+YFV+++ GGELF + + R F E +R Y ++ SA+ Y HS + +R
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKV 199
D ++DFGL KE I + T CGTP Y+APE+L K+ YD V
Sbjct: 164 DLKPENILLDSQGHIVLTDFGL--CKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRT-V 220
Query: 200 DMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPAT 259
D W G VL+ + G PF N MY I + + + + LL D
Sbjct: 221 DWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTK 280
Query: 260 RI 261
R+
Sbjct: 281 RL 282
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 6/260 (2%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMS-RLRHP 76
+E+ K++G G+F KV+ +T Q AIKA+ K +L E ++S HP
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ ++ TK ++FVME+ GG+L I S +F + Y ++I +++ HS+G
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 139
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD I+DFG+ KE + D + CGTP Y+APEIL + Y+
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGM--CKENMLGDAKTNEFCGTPDYIAPEILLGQKYN 197
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDT 255
+ VD WS GV+L+ + G PF+ + ++ I P+W + K + +L
Sbjct: 198 HS-VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVR 256
Query: 256 DPATRITV-DEILRDPWFKK 274
+P R+ V +I + P F++
Sbjct: 257 EPEKRLGVRGDIRQHPLFRE 276
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 146/294 (49%), Gaps = 27/294 (9%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-HPNIVK 80
K +G G+F+ + ++ Q+ A+K +SK+ + A+ ++EI+ + HPNIVK
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVK 70
Query: 81 LYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRGVFHR 139
L+EV + + VME GGELF +I K + FSE + ++L+SAV + H GV HR
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 140 DXXXXX---XXXXXXXXXXISDFGLSAVKEQIRPDGM-LHTLCGTPAYVAPEILAKKGYD 195
D I DFG + +K PD L T C T Y APE+L + GYD
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKP---PDNQPLKTPCFTLHYAAPELLNQNGYD 187
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF--NDPNL-----MAMYRKIYKGEYRCP----KWTSPD 244
+ D+WS GV+L+ + +G +PF +D +L + + +KI KG++ K S +
Sbjct: 188 ES-CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQE 246
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSVGCNVGS 298
K I LL DP R+ + + + W + + P D+ S G V +
Sbjct: 247 AKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHT 300
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 16/265 (6%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT-----AHVKREISIMS 71
KY +G GAF V+ + + V +K + K+K+L V EI+I+S
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 72 RLRHPNIVKLYEVLATKAKIYFVME-FAKGGELFAKISK-GRFSEQLSRRYFQQLISAVE 129
R+ H NI+K+ ++ + VME G +LFA I + R E L+ F+QL+SAV
Sbjct: 85 RVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 130 YCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEIL 189
Y + + HRD + DFG +A E+ + + +T CGT Y APE+L
Sbjct: 145 YLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK---LFYTFCGTIEYCAPEVL 201
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFI 249
Y G +++MWS GV L+ L PF + + + P S +L +
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENPFCE------LEETVEAAIHPPYLVSKELMSLV 255
Query: 250 GRLLDTDPATRITVDEILRDPWFKK 274
LL P R T+++++ DPW +
Sbjct: 256 SGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 131/269 (48%), Gaps = 25/269 (9%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-RHP 76
YEV + IG G+++ + T A+K + K K EI I+ R +HP
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRYGQHP 76
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRG 135
NI+ L +V +Y V E KGGEL KI + + FSE+ + + VEY H++G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 136 VFHRDXXXXXXXXXXXX----XXXISDFGLSAVKEQIRPD-GMLHTLCGTPAYVAPEILA 190
V HRD I DFG + +Q+R + G+L T C T +VAPE+L
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFA---KQLRAENGLLMTPCYTANFVAPEVLE 193
Query: 191 KKGYDGAKVDMWSCGVVLFVLNAGYLPF-NDPNLMA--MYRKIYKGEYRCPK--WTSPD- 244
++GYD A D+WS GV+L+ + GY PF N P+ + +I G++ W S
Sbjct: 194 RQGYDAA-CDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSD 252
Query: 245 -LKWFIGRLLDTDPATRITVDEILRDPWF 272
K + ++L DP R+T +LR PW
Sbjct: 253 TAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 133/282 (47%), Gaps = 28/282 (9%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGG---------LTAHVK 64
+ YE +I+G G + V + T + A+K + + GG L
Sbjct: 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIID---VTGGGSFSAEEVQELREATL 71
Query: 65 REISIMSRLR-HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQ 122
+E+ I+ ++ HPNI++L + T + V + K GELF ++ K SE+ +R+ +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
L+ + H + HRD ++DFG S Q+ P L ++CGTP+
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC---QLDPGEKLRSVCGTPS 188
Query: 183 YVAPEILA------KKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR 236
Y+APEI+ GY G +VDMWS GV+++ L AG PF M M R I G Y+
Sbjct: 189 YLAPEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 247
Query: 237 --CPKWT--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
P+W S +K + R L P R T +E L P+F++
Sbjct: 248 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 18/268 (6%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKIL---RGGLTAHVKREISIMSRLR 74
Y++G+ +G G FA V R TG A K + K++ RG ++RE+SI+ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQLISAVEYCHS 133
HPNI+ L++V + + ++E GGELF ++ K SE+ + + +Q++ V Y H+
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 134 RGVFHRDXXXXXXXXXXXX----XXXISDFGLSAVKEQIRPDGM-LHTLCGTPAYVAPEI 188
+ + H D + DFGL+ E DG+ + GTP +VAPEI
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTPEFVAPEI 189
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEYRCPKWTSPD 244
+ + G + DMWS GV+ ++L +G PF L + Y + TS
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPWF 272
K FI +LL + R+T+ E LR PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 146/287 (50%), Gaps = 25/287 (8%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVR---TGQSVAIKAVSKQKIL-RGGLTAHVKREISIMSRL 73
+E+ K++G GA+ KV+ R + TG+ A+K + K I+ + T H + E ++ +
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 74 RH-PNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQLISAVEYC 131
R P +V L+ T+ K++ ++++ GGELF +S + RF+E + Y +++ A+E+
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHL 175
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-MLHTLCGTPAYVAPEIL- 189
H G+ +RD ++DFGLS KE + + + CGT Y+AP+I+
Sbjct: 176 HKLGIIYRDIKLENILLDSNGHVVLTDFGLS--KEFVADETERAYDFCGTIEYMAPDIVR 233
Query: 190 -AKKGYDGAKVDMWSCGVVLFVLNAGYLPFN---DPNLMA-MYRKIYKGEYRCPKWTSPD 244
G+D A VD WS GV+++ L G PF + N A + R+I K E P+ S
Sbjct: 234 GGDSGHDKA-VDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL 292
Query: 245 LKWFIGRLLDTDPATRI-----TVDEILRDPWFKK----DYKERKFP 282
K I RLL DP R+ DEI +F+K D +K P
Sbjct: 293 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVP 339
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 132/282 (46%), Gaps = 28/282 (9%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGG---------LTAHVK 64
+ YE +I+G G + V + T + A+K + + GG L
Sbjct: 2 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIID---VTGGGSFSAEEVQELREATL 58
Query: 65 REISIMSRLR-HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQ 122
+E+ I+ ++ HPNI++L + T + V + K GELF ++ K SE+ +R+ +
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 118
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
L+ + H + HRD ++DFG S Q+ P L +CGTP+
Sbjct: 119 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC---QLDPGEKLREVCGTPS 175
Query: 183 YVAPEILA------KKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR 236
Y+APEI+ GY G +VDMWS GV+++ L AG PF M M R I G Y+
Sbjct: 176 YLAPEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 234
Query: 237 --CPKWT--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
P+W S +K + R L P R T +E L P+F++
Sbjct: 235 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 132/282 (46%), Gaps = 28/282 (9%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGG---------LTAHVK 64
+ YE +I+G G + V + T + A+K + + GG L
Sbjct: 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIID---VTGGGSFSAEEVQELREATL 71
Query: 65 REISIMSRLR-HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQ 122
+E+ I+ ++ HPNI++L + T + V + K GELF ++ K SE+ +R+ +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
L+ + H + HRD ++DFG S Q+ P L +CGTP+
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC---QLDPGEKLREVCGTPS 188
Query: 183 YVAPEILA------KKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR 236
Y+APEI+ GY G +VDMWS GV+++ L AG PF M M R I G Y+
Sbjct: 189 YLAPEIIECSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ 247
Query: 237 --CPKWT--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
P+W S +K + R L P R T +E L P+F++
Sbjct: 248 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 128/258 (49%), Gaps = 6/258 (2%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMS-RLRHPNI 78
+ K++G G+F KV+ +T Q AIKA+ K +L E ++S HP +
Sbjct: 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 80
Query: 79 VKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
++ TK ++FVME+ GG+L I S +F + Y ++I +++ HS+G+
Sbjct: 81 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIV 140
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
+RD I+DFG+ KE + D + CGTP Y+APEIL + Y+ +
Sbjct: 141 YRDLKLDNILLDKDGHIKIADFGM--CKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHS 198
Query: 198 KVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDP 257
VD WS GV+L+ + G PF+ + ++ I P+W + K + +L +P
Sbjct: 199 -VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREP 257
Query: 258 ATRITV-DEILRDPWFKK 274
R+ V +I + P F++
Sbjct: 258 EKRLGVRGDIRQHPLFRE 275
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 129/269 (47%), Gaps = 25/269 (9%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-RHP 76
YEV + IG G+++ + T A+K + K K EI I+ R +HP
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------RDPTEEIEILLRYGQHP 76
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRG 135
NI+ L +V +Y V E KGGEL KI + + FSE+ + + VEY H++G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 136 VFHRDXXXXXXXXXXXX----XXXISDFGLSAVKEQIRPD-GMLHTLCGTPAYVAPEILA 190
V HRD I DFG + +Q+R + G+L T C T +VAPE+L
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFA---KQLRAENGLLXTPCYTANFVAPEVLE 193
Query: 191 KKGYDGAKVDMWSCGVVLFVLNAGYLPF-NDPNLMA--MYRKIYKGEYRCPK--WTSPD- 244
++GYD A D+WS GV+L+ GY PF N P+ + +I G++ W S
Sbjct: 194 RQGYDAA-CDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSD 252
Query: 245 -LKWFIGRLLDTDPATRITVDEILRDPWF 272
K + + L DP R+T +LR PW
Sbjct: 253 TAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 131/255 (51%), Gaps = 14/255 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-RHP 76
+++ ++IG G++AKV R +T + A++ V K+ + V+ E + + HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRG 135
+V L+ T+++++FV+E+ GG+L + + R E+ +R Y ++ A+ Y H RG
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++D+G+ KE +RP T CGTP Y+APEIL + Y
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGM--CKEGLRPGDTTSTFCGTPNYIAPEILRGEDY- 230
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF------NDPNLMA---MYRKIYKGEYRCPKWTSPDLK 246
G VD W+ GV++F + AG PF ++P+ +++ I + + R P+ S
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 290
Query: 247 WFIGRLLDTDPATRI 261
+ L+ DP R+
Sbjct: 291 SVLKSFLNKDPKERL 305
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 31/282 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 72 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 123
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + VME GGELF++I F+E+ + + + A++Y
Sbjct: 124 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 183
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
HS + HRD I +DFG + ++ L T C TP YVAPE+
Sbjct: 184 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEV 240
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCP--KWT- 241
L + YD + DMWS GV++++L GY PF + +A M +I G+Y P +W+
Sbjct: 241 LGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 299
Query: 242 -SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
S ++K I LL T+P R+T+ E + PW + K + P
Sbjct: 300 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 341
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 130/255 (50%), Gaps = 14/255 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-RHP 76
+++ ++IG G++AKV R +T + A+K V K+ + V+ E + + HP
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRG 135
+V L+ T+++++FV+E+ GG+L + + R E+ +R Y ++ A+ Y H RG
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++D+G+ KE +RP CGTP Y+APEIL + Y
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGM--CKEGLRPGDTTSXFCGTPNYIAPEILRGEDY- 198
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF------NDPNLMA---MYRKIYKGEYRCPKWTSPDLK 246
G VD W+ GV++F + AG PF ++P+ +++ I + + R P+ S
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKAA 258
Query: 247 WFIGRLLDTDPATRI 261
+ L+ DP R+
Sbjct: 259 SVLKSFLNKDPKERL 273
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 31/282 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 66 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 117
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + VME GGELF++I F+E+ + + + A++Y
Sbjct: 118 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 177
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
HS + HRD I +DFG + ++ L T C TP YVAPE+
Sbjct: 178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEV 234
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCP--KWT- 241
L + YD + DMWS GV++++L GY PF + +A M +I G+Y P +W+
Sbjct: 235 LGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 293
Query: 242 -SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
S ++K I LL T+P R+T+ E + PW + K + P
Sbjct: 294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 335
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 31/282 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 22 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 73
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + VME GGELF++I F+E+ + + + A++Y
Sbjct: 74 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
HS + HRD I +DFG + ++ L T C TP YVAPE+
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEV 190
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCP--KWT- 241
L + YD + DMWS GV++++L GY PF + +A M +I G+Y P +W+
Sbjct: 191 LGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 249
Query: 242 -SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
S ++K I LL T+P R+T+ E + PW + K + P
Sbjct: 250 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 291
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 31/282 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 22 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 73
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + VME GGELF++I F+E+ + + + A++Y
Sbjct: 74 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
HS + HRD I +DFG + ++ L T C TP YVAPE+
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEV 190
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCP--KWT- 241
L + YD + DMWS GV++++L GY PF + +A M +I G+Y P +W+
Sbjct: 191 LGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 249
Query: 242 -SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
S ++K I LL T+P R+T+ E + PW + K + P
Sbjct: 250 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 291
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 31/282 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 28 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 79
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + VME GGELF++I F+E+ + + + A++Y
Sbjct: 80 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 139
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
HS + HRD I +DFG + ++ L T C TP YVAPE+
Sbjct: 140 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEV 196
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCP--KWT- 241
L + YD + DMWS GV++++L GY PF + +A M +I G+Y P +W+
Sbjct: 197 LGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 255
Query: 242 -SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
S ++K I LL T+P R+T+ E + PW + K + P
Sbjct: 256 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 297
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 138/291 (47%), Gaps = 32/291 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 36 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 87
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + VME GGELF++I F+E+ + + + A++Y
Sbjct: 88 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 147
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
HS + HRD I +DFG + ++ L T C TP YVAPE+
Sbjct: 148 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEV 204
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCP--KWT- 241
L + YD + DMWS GV++++L GY PF + +A M +I G+Y P +W+
Sbjct: 205 LGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 263
Query: 242 -SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP-HEDFDLKD 290
S ++K I LL T+P R+T+ E + PW + K + P H LK+
Sbjct: 264 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKE 314
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 31/282 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 26 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 77
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + VME GGELF++I F+E+ + + + A++Y
Sbjct: 78 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 137
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
HS + HRD I +DFG + ++ L T C TP YVAPE+
Sbjct: 138 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEV 194
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCP--KWT- 241
L + YD + DMWS GV++++L GY PF + +A M +I G+Y P +W+
Sbjct: 195 LGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 253
Query: 242 -SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
S ++K I LL T+P R+T+ E + PW + K + P
Sbjct: 254 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 295
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 130/255 (50%), Gaps = 14/255 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-RHP 76
+++ ++IG G++AKV R +T + A+K V K+ + V+ E + + HP
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRG 135
+V L+ T+++++FV+E+ GG+L + + R E+ +R Y ++ A+ Y H RG
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++D+G+ KE +RP CGTP Y+APEIL + Y
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGM--CKEGLRPGDTTSXFCGTPNYIAPEILRGEDY- 183
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF------NDPNLMA---MYRKIYKGEYRCPKWTSPDLK 246
G VD W+ GV++F + AG PF ++P+ +++ I + + R P+ S
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 243
Query: 247 WFIGRLLDTDPATRI 261
+ L+ DP R+
Sbjct: 244 SVLKSFLNKDPKERL 258
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 31/282 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 27 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 78
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + VME GGELF++I F+E+ + + + A++Y
Sbjct: 79 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 138
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
HS + HRD I +DFG + ++ L T C TP YVAPE+
Sbjct: 139 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEV 195
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCP--KWT- 241
L + YD + DMWS GV++++L GY PF + +A M +I G+Y P +W+
Sbjct: 196 LGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 254
Query: 242 -SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
S ++K I LL T+P R+T+ E + PW + K + P
Sbjct: 255 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 296
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 130/255 (50%), Gaps = 14/255 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-RHP 76
+++ ++IG G++AKV R +T + A+K V K+ + V+ E + + HP
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRG 135
+V L+ T+++++FV+E+ GG+L + + R E+ +R Y ++ A+ Y H RG
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ +RD ++D+G+ KE +RP CGTP Y+APEIL + Y
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGM--CKEGLRPGDTTSXFCGTPNYIAPEILRGEDY- 187
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF------NDPNLMA---MYRKIYKGEYRCPKWTSPDLK 246
G VD W+ GV++F + AG PF ++P+ +++ I + + R P+ S
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAA 247
Query: 247 WFIGRLLDTDPATRI 261
+ L+ DP R+
Sbjct: 248 SVLKSFLNKDPKERL 262
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 31/282 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 20 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 71
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + VME GGELF++I F+E+ + + + A++Y
Sbjct: 72 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
HS + HRD I +DFG + ++ L T C TP YVAPE+
Sbjct: 132 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEV 188
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCP--KWT- 241
L + YD + DMWS GV++++L GY PF + +A M +I G+Y P +W+
Sbjct: 189 LGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 247
Query: 242 -SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
S ++K I LL T+P R+T+ E + PW + K + P
Sbjct: 248 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 289
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 134/282 (47%), Gaps = 31/282 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 21 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 72
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + VME GGELF++I F+E+ + + + A++Y
Sbjct: 73 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 132
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
HS + HRD I +DFG + ++ L T C TP YVAPE+
Sbjct: 133 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEV 189
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCP--KWT- 241
L + YD + DMWS GV++++L GY PF + +A M +I G+Y P +W+
Sbjct: 190 LGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 248
Query: 242 -SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
S ++K I LL T+P R+T+ E + PW + K + P
Sbjct: 249 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 290
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKIL---RGGLTAHVKREISIMSRLR 74
Y++G+ +G G FA V R TG A K + K++ RG ++RE+SI+ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQLISAVEYCHS 133
H N++ L++V + + ++E GGELF ++ K SE+ + + +Q++ V Y H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 134 RGVFHRDXXXXXXXXXXXX----XXXISDFGLSAVKEQIRPDGM-LHTLCGTPAYVAPEI 188
+ + H D + DFGL+ E DG+ + GTP +VAPEI
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTPEFVAPEI 189
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEYRCPKWTSPD 244
+ + G + DMWS GV+ ++L +G PF L + Y + TS
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPW 271
K FI +LL + R+T+ E LR PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKIL---RGGLTAHVKREISIMSRLR 74
Y++G+ +G G FA V R TG A K + K++ RG ++RE+SI+ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQLISAVEYCHS 133
H N++ L++V + + ++E GGELF ++ K SE+ + + +Q++ V Y H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 134 RGVFHRDXXXXXXXXXXXX----XXXISDFGLSAVKEQIRPDGM-LHTLCGTPAYVAPEI 188
+ + H D + DFGL+ E DG+ + GTP +VAPEI
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTPEFVAPEI 189
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEYRCPKWTSPD 244
+ + G + DMWS GV+ ++L +G PF L + Y + TS
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPW 271
K FI +LL + R+T+ E LR PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKIL---RGGLTAHVKREISIMSRLR 74
Y++G+ +G G FA V R TG A K + K++ RG ++RE+SI+ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQLISAVEYCHS 133
H N++ L++V + + ++E GGELF ++ K SE+ + + +Q++ V Y H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 134 RGVFHRDXXXXXXXXXXXX----XXXISDFGLSAVKEQIRPDGM-LHTLCGTPAYVAPEI 188
+ + H D + DFGL+ E DG+ + GTP +VAPEI
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTPEFVAPEI 189
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEYRCPKWTSPD 244
+ + G + DMWS GV+ ++L +G PF L + Y + TS
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPW 271
K FI +LL + R+T+ E LR PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKIL---RGGLTAHVKREISIMSRLR 74
Y++G+ +G G FA V R TG A K + K++ RG ++RE+SI+ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQLISAVEYCHS 133
H N++ L++V + + ++E GGELF ++ K SE+ + + +Q++ V Y H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 134 RGVFHRDXXXXXXXXXXXX----XXXISDFGLSAVKEQIRPDGM-LHTLCGTPAYVAPEI 188
+ + H D + DFGL+ E DG+ + GTP +VAPEI
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTPEFVAPEI 189
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEYRCPKWTSPD 244
+ + G + DMWS GV+ ++L +G PF L + Y + TS
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPW 271
K FI +LL + R+T+ E LR PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKIL---RGGLTAHVKREISIMSRLR 74
Y++G+ +G G FA V R TG A K + K++ RG ++RE+SI+ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS-KGRFSEQLSRRYFQQLISAVEYCHS 133
H N++ L++V + + ++E GGELF ++ K SE+ + + +Q++ V Y H+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 134 RGVFHRDXXXXXXXXXXXX----XXXISDFGLSAVKEQIRPDGM-LHTLCGTPAYVAPEI 188
+ + H D + DFGL+ E DG+ + GTP +VAPEI
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE----DGVEFKNIFGTPEFVAPEI 189
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEYRCPKWTSPD 244
+ + G + DMWS GV+ ++L +G PF L + Y + TS
Sbjct: 190 VNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPW 271
K FI +LL + R+T+ E LR PW
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 129/261 (49%), Gaps = 11/261 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
KY + IG GA VY +V TGQ VAI+ ++ Q+ + L + EI +M ++P
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 77
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
NIV + +++ VME+ GG L +++ E ++ + A+E+ HS V
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD-GMLHTLCGTPAYVAPEILAKKGYD 195
HRD ++DFG A QI P+ T+ GTP ++APE++ +K Y
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTRKAY- 193
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-NDPNLMAMYRKIYKG--EYRCPKWTSPDLKWFIGRL 252
G KVD+WS G++ + G P+ N+ L A+Y G E + P+ S + F+ R
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 253 LDTDPATRITVDEILRDPWFK 273
LD D R + E+L+ + K
Sbjct: 254 LDMDVEKRGSAKELLQHQFLK 274
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 134/270 (49%), Gaps = 16/270 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y+V K+IG GAF +V R+ + + A+K +SK ++++ +A E IM+ P
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
+V+L+ +Y VME+ GG+L +S E+ ++ Y +++ A++ HS G+
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLI 196
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLH--TLCGTPAYVAPEILAKK--- 192
HRD ++DFG ++ GM+H T GTP Y++PE+L +
Sbjct: 197 HRDVKPDNMLLDKHGHLKLADFGTCMKMDET---GMVHCDTAVGTPDYISPEVLKSQGGD 253
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI--YKGEYRCPK--WTSPDLKWF 248
GY G + D WS GV LF + G PF +L+ Y KI +K P+ S K
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNL 313
Query: 249 IGRLLDTDPATRI---TVDEILRDPWFKKD 275
I L TD R+ V+EI + P+FK D
Sbjct: 314 ICAFL-TDREVRLGRNGVEEIKQHPFFKND 342
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 133/282 (47%), Gaps = 31/282 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 20 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 71
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + VME GGELF++I F+E+ + + + A++Y
Sbjct: 72 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
HS + HRD I +DFG + ++ L C TP YVAPE+
Sbjct: 132 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTEPCYTPYYVAPEV 188
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCP--KWT- 241
L + YD + DMWS GV++++L GY PF + +A M +I G+Y P +W+
Sbjct: 189 LGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 247
Query: 242 -SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
S ++K I LL T+P R+T+ E + PW + K + P
Sbjct: 248 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 289
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 133/275 (48%), Gaps = 15/275 (5%)
Query: 10 REVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISI 69
++ +++ Y++ + +G GAF V+ TG+ K ++ L VK EISI
Sbjct: 45 KQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD---KYTVKNEISI 101
Query: 70 MSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKG--RFSEQLSRRYFQQLISA 127
M++L HP ++ L++ K ++ ++EF GGELF +I+ + SE Y +Q
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161
Query: 128 VEYCHSRGVFHRDXXXXXXX--XXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
+++ H + H D I DFGL+ ++ PD ++ T + A
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT---KLNPDEIVKVTTATAEFAA 218
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPK----WT 241
PEI+ ++ G DMW+ GV+ +VL +G PF + + + + + ++ +
Sbjct: 219 PEIVDREPV-GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 277
Query: 242 SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDY 276
SP+ K FI LL +P R+TV + L PW K D+
Sbjct: 278 SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH 312
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 132/270 (48%), Gaps = 16/270 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV K+IG GAF +V R+ T + A+K +SK ++++ +A E IM+ P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
+V+L+ +Y VME+ GG+L +S E+ +R Y +++ A++ HS G
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLH--TLCGTPAYVAPEILAKK--- 192
HRD ++DFG ++ +GM+ T GTP Y++PE+L +
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI--YKGEYRCPKWT--SPDLKWF 248
GY G + D WS GV L+ + G PF +L+ Y KI +K P S + K
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 312
Query: 249 IGRLLDTDPATRI---TVDEILRDPWFKKD 275
I L TD R+ V+EI R +FK D
Sbjct: 313 ICAFL-TDREVRLGRNGVEEIKRHLFFKND 341
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 131/276 (47%), Gaps = 31/276 (11%)
Query: 18 YEVGK-IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
Y++ K ++G G KV + RTGQ A+K + R + H + P
Sbjct: 11 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG-------P 63
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVE 129
+IV + +V K + +ME +GGELF++I + F+E+ + + + +A++
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 130 YCHSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ HS + HRD + +DFG + Q L T C TP YVAP
Sbjct: 124 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ----NALQTPCYTPYYVAP 179
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEY--RCPKW 240
E+L + YD + DMWS GV++++L G+ PF A M R+I G+Y P+W
Sbjct: 180 EVLGPEKYDKS-CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW 238
Query: 241 T--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
+ S D K I LL TDP R+T+ + + PW +
Sbjct: 239 SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 132/270 (48%), Gaps = 16/270 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV K+IG GAF +V R+ T + A+K +SK ++++ +A E IM+ P
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
+V+L+ +Y VME+ GG+L +S E+ +R Y +++ A++ HS G
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 190
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLH--TLCGTPAYVAPEILAKK--- 192
HRD ++DFG ++ +GM+ T GTP Y++PE+L +
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 247
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI--YKGEYRCPKWT--SPDLKWF 248
GY G + D WS GV L+ + G PF +L+ Y KI +K P S + K
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 307
Query: 249 IGRLLDTDPATRI---TVDEILRDPWFKKD 275
I L TD R+ V+EI R +FK D
Sbjct: 308 ICAFL-TDREVRLGRNGVEEIKRHLFFKND 336
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 132/270 (48%), Gaps = 16/270 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV K+IG GAF +V R+ T + A+K +SK ++++ +A E IM+ P
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
+V+L+ +Y VME+ GG+L +S E+ +R Y +++ A++ HS G
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLH--TLCGTPAYVAPEILAKK--- 192
HRD ++DFG ++ +GM+ T GTP Y++PE+L +
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCM---KMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI--YKGEYRCPKWT--SPDLKWF 248
GY G + D WS GV L+ + G PF +L+ Y KI +K P S + K
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 312
Query: 249 IGRLLDTDPATRI---TVDEILRDPWFKKD 275
I L TD R+ V+EI R +FK D
Sbjct: 313 ICAFL-TDREVRLGRNGVEEIKRHLFFKND 341
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 131/276 (47%), Gaps = 31/276 (11%)
Query: 18 YEVGK-IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
Y++ K ++G G KV + RTGQ A+K + R + H + P
Sbjct: 30 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG-------P 82
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVE 129
+IV + +V K + +ME +GGELF++I + F+E+ + + + +A++
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 130 YCHSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ HS + HRD + +DFG + Q L T C TP YVAP
Sbjct: 143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ----NALQTPCYTPYYVAP 198
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEY--RCPKW 240
E+L + YD + DMWS GV++++L G+ PF A M R+I G+Y P+W
Sbjct: 199 EVLGPEKYDKS-CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW 257
Query: 241 T--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
+ S D K I LL TDP R+T+ + + PW +
Sbjct: 258 SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 129/261 (49%), Gaps = 11/261 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
KY + IG GA VY +V TGQ VAI+ ++ Q+ + L + EI +M ++P
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 77
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
NIV + +++ VME+ GG L +++ E ++ + A+E+ HS V
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT-LCGTPAYVAPEILAKKGYD 195
HRD ++DFG A QI P+ + + GTP ++APE++ +K Y
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSEMVGTPYWMAPEVVTRKAY- 193
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-NDPNLMAMYRKIYKG--EYRCPKWTSPDLKWFIGRL 252
G KVD+WS G++ + G P+ N+ L A+Y G E + P+ S + F+ R
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 253 LDTDPATRITVDEILRDPWFK 273
LD D R + E+L+ + K
Sbjct: 254 LDMDVEKRGSAKELLQHQFLK 274
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 9/254 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+ V +G+ VA+K + +K R L + E+ IM +H N+V++Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 84
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXX 143
+++ VMEF +GG L ++ R +E+ ++ A+ H++GV HRD
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 144
Query: 144 XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWS 203
+SDFG A + P L GTP ++APE++++ Y G +VD+WS
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPY-GPEVDIWS 201
Query: 204 CGVVLFVLNAGYLP-FNDPNL--MAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
G+++ + G P FN+P L M M R + SP LK F+ RLL DPA R
Sbjct: 202 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 261
Query: 261 ITVDEILRDPWFKK 274
T E+L+ P+ K
Sbjct: 262 ATAAELLKHPFLAK 275
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 9/254 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+ V +G+ VA+K + +K R L + E+ IM +H N+V++Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 93
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXX 143
+++ VMEF +GG L ++ R +E+ ++ A+ H++GV HRD
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 153
Query: 144 XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWS 203
+SDFG A + P L GTP ++APE++++ Y G +VD+WS
Sbjct: 154 DSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPY-GPEVDIWS 210
Query: 204 CGVVLFVLNAGYLP-FNDPNL--MAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
G+++ + G P FN+P L M M R + SP LK F+ RLL DPA R
Sbjct: 211 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 270
Query: 261 ITVDEILRDPWFKK 274
T E+L+ P+ K
Sbjct: 271 ATAAELLKHPFLAK 284
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 9/254 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+ V +G+ VA+K + +K R L + E+ IM +H N+V++Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 88
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXX 143
+++ VMEF +GG L ++ R +E+ ++ A+ H++GV HRD
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 148
Query: 144 XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWS 203
+SDFG A + P L GTP ++APE++++ Y G +VD+WS
Sbjct: 149 DSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPY-GPEVDIWS 205
Query: 204 CGVVLFVLNAGYLP-FNDPNL--MAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
G+++ + G P FN+P L M M R + SP LK F+ RLL DPA R
Sbjct: 206 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 265
Query: 261 ITVDEILRDPWFKK 274
T E+L+ P+ K
Sbjct: 266 ATAAELLKHPFLAK 279
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 9/254 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+ V +G+ VA+K + +K R L + E+ IM +H N+V++Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 95
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXX 143
+++ VMEF +GG L ++ R +E+ ++ A+ H++GV HRD
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 155
Query: 144 XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWS 203
+SDFG A + P L GTP ++APE++++ Y G +VD+WS
Sbjct: 156 DSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPY-GPEVDIWS 212
Query: 204 CGVVLFVLNAGYLP-FNDPNL--MAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
G+++ + G P FN+P L M M R + SP LK F+ RLL DPA R
Sbjct: 213 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 272
Query: 261 ITVDEILRDPWFKK 274
T E+L+ P+ K
Sbjct: 273 ATAAELLKHPFLAK 286
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 9/254 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+ V +G+ VA+K + +K R L + E+ IM +H N+V++Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 138
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXX 143
+++ VMEF +GG L ++ R +E+ ++ A+ H++GV HRD
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 198
Query: 144 XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWS 203
+SDFG A + P L GTP ++APE++++ Y G +VD+WS
Sbjct: 199 DSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPY-GPEVDIWS 255
Query: 204 CGVVLFVLNAGYLP-FNDPNL--MAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
G+++ + G P FN+P L M M R + SP LK F+ RLL DPA R
Sbjct: 256 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 315
Query: 261 ITVDEILRDPWFKK 274
T E+L+ P+ K
Sbjct: 316 ATAAELLKHPFLAK 329
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 9/254 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+ V +G+ VA+K + +K R L + E+ IM +H N+V++Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYN 215
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXX 143
+++ VMEF +GG L ++ R +E+ ++ A+ H++GV HRD
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 275
Query: 144 XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWS 203
+SDFG A + P L GTP ++APE++++ Y G +VD+WS
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPY-GPEVDIWS 332
Query: 204 CGVVLFVLNAGYLP-FNDPNL--MAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
G+++ + G P FN+P L M M R + SP LK F+ RLL DPA R
Sbjct: 333 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR 392
Query: 261 ITVDEILRDPWFKK 274
T E+L+ P+ K
Sbjct: 393 ATAAELLKHPFLAK 406
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 121/274 (44%), Gaps = 27/274 (9%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH------VKRE 66
++ Y++ + +G GAF V+ TG + A K V +T H V++E
Sbjct: 48 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---------MTPHESDKETVRKE 98
Query: 67 ISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS--KGRFSEQLSRRYFQQL 124
I MS LRHP +V L++ ++ + EF GGELF K++ + SE + Y +Q+
Sbjct: 99 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV 158
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXIS--DFGLSAVKEQIRPDGMLHTLCGTPA 182
+ + H H D + DFGL+A + P + GT
Sbjct: 159 CKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTA---HLDPKQSVKVTTGTAE 215
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWT- 241
+ APE+ K G DMWS GV+ ++L +G PF N R + ++
Sbjct: 216 FAAPEVAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF 274
Query: 242 ---SPDLKWFIGRLLDTDPATRITVDEILRDPWF 272
S D K FI +LL DP TR+T+ + L PW
Sbjct: 275 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 27/288 (9%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGL---TAHVKREISIMSR 72
+Y +G ++G G F V+ G + VAIK + + ++L + E++++ +
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90
Query: 73 LR----HPNIVKLYEVLATKAKIYFVMEFA-KGGELFAKIS-KGRFSEQLSRRYFQQLIS 126
+ HP +++L + T+ V+E +LF I+ KG E SR +F Q+++
Sbjct: 91 VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVA 150
Query: 127 AVEYCHSRGVFHRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
A+++CHSRGV HRD + DFG A+ D GT Y
Sbjct: 151 AIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH----DEPYTDFDGTRVYSP 206
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE +++ Y +WS G++L+ + G +PF ++I + E P SPD
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDMVCGDIPFE------RDQEILEAELHFPAHVSPDC 260
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLKDSVG 293
I R L P++R +++EIL DPW + P ED L S G
Sbjct: 261 CALIRRCLAPKPSSRPSLEEILLDPWMQT-------PAEDVPLNPSKG 301
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 121/274 (44%), Gaps = 27/274 (9%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH------VKRE 66
++ Y++ + +G GAF V+ TG + A K V +T H V++E
Sbjct: 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---------MTPHESDKETVRKE 204
Query: 67 ISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS--KGRFSEQLSRRYFQQL 124
I MS LRHP +V L++ ++ + EF GGELF K++ + SE + Y +Q+
Sbjct: 205 IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV 264
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXIS--DFGLSAVKEQIRPDGMLHTLCGTPA 182
+ + H H D + DFGL+A + P + GT
Sbjct: 265 CKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTA---HLDPKQSVKVTTGTAE 321
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWT- 241
+ APE+ K G DMWS GV+ ++L +G PF N R + ++
Sbjct: 322 FAAPEVAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAF 380
Query: 242 ---SPDLKWFIGRLLDTDPATRITVDEILRDPWF 272
S D K FI +LL DP TR+T+ + L PW
Sbjct: 381 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 129/261 (49%), Gaps = 11/261 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
KY + IG GA VY +V TGQ VAI+ ++ Q+ + L + EI +M ++P
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 77
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
NIV + +++ VME+ GG L +++ E ++ + A+E+ HS V
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT-LCGTPAYVAPEILAKKGYD 195
HRD ++DFG A QI P+ + + GTP ++APE++ +K Y
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSXMVGTPYWMAPEVVTRKAY- 193
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-NDPNLMAMYRKIYKG--EYRCPKWTSPDLKWFIGRL 252
G KVD+WS G++ + G P+ N+ L A+Y G E + P+ S + F+ R
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 253 LDTDPATRITVDEILRDPWFK 273
L+ D R + E+L+ + K
Sbjct: 254 LEMDVEKRGSAKELLQHQFLK 274
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 26/279 (9%)
Query: 12 VNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMS 71
VN F +I+G G F +V+ TG +A K + + + VK EIS+M+
Sbjct: 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD---KEEVKNEISVMN 141
Query: 72 RLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRF--SEQLSRRYFQQLISAVE 129
+L H N+++LY+ +K I VME+ GGELF +I + +E + + +Q+ +
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIR 201
Query: 130 YCHSRGVFHRDXXXXXXXXXXXXXXXIS--DFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
+ H + H D I DFGL+ + +P L GTP ++APE
Sbjct: 202 HMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLA---RRYKPREKLKVNFGTPEFLAPE 258
Query: 188 ILAKKGYD--GAKVDMWSCGVVLFVLNAGYLPF---NDP----NLMAMYRKIYKGEYRCP 238
++ YD DMWS GV+ ++L +G PF ND N++A + E++
Sbjct: 259 VV---NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQD- 314
Query: 239 KWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYK 277
S + K FI +LL + + RI+ E L+ PW D+K
Sbjct: 315 --ISEEAKEFISKLLIKEKSWRISASEALKHPWL-SDHK 350
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 11/261 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
KY + IG GA VY +V TGQ VAI+ ++ Q+ + L + EI +M ++P
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 78
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
NIV + +++ VME+ GG L +++ E ++ + A+E+ HS V
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD-GMLHTLCGTPAYVAPEILAKKGYD 195
HR+ ++DFG A QI P+ T+ GTP ++APE++ +K Y
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTRKAY- 194
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-NDPNLMAMYRKIYKG--EYRCPKWTSPDLKWFIGRL 252
G KVD+WS G++ + G P+ N+ L A+Y G E + P+ S + F+ R
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 254
Query: 253 LDTDPATRITVDEILRDPWFK 273
L+ D R + E+++ + K
Sbjct: 255 LEMDVEKRGSAKELIQHQFLK 275
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 11/261 (4%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
KY + IG GA VY +V TGQ VAI+ ++ Q+ + L + EI +M ++P
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 78
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
NIV + +++ VME+ GG L +++ E ++ + A+E+ HS V
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 138
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT-LCGTPAYVAPEILAKKGYD 195
HRD ++DFG A QI P+ + + GTP ++APE++ +K Y
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSXMVGTPYWMAPEVVTRKAY- 194
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-NDPNLMAMYRKIYKG--EYRCPKWTSPDLKWFIGRL 252
G KVD+WS G++ + G P+ N+ L A+Y G E + P+ S + F+ R
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 254
Query: 253 LDTDPATRITVDEILRDPWFK 273
L+ D R + E+++ + K
Sbjct: 255 LEMDVEKRGSAKELIQHQFLK 275
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 16/262 (6%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
N + + K IG G F++VY + G VA+K V ++ A +EI ++ +
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 73 LRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-----SKGRFSEQLSRRYFQQLISA 127
L HPN++K Y ++ V+E A G+L I K E+ +YF QL SA
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
+E+ HSR V HRD + D GL H+L GTP Y++PE
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPE 206
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF--NDPNLMAMYRKIYKGEYRCPKWT---- 241
+ + GY+ K D+WS G +L+ + A PF + NL ++ +KI + +Y P
Sbjct: 207 RIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY--PPLPSDHY 263
Query: 242 SPDLKWFIGRLLDTDPATRITV 263
S +L+ + ++ DP R V
Sbjct: 264 SEELRQLVNMCINPDPEKRPDV 285
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 121/265 (45%), Gaps = 24/265 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G GAF V+ +G IK ++K + ++ EI ++ L HPNI+K++E
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSRRYFQQLISAVEYCHSRGVFH 138
V +Y VME +GGEL +I + SE +Q+++A+ Y HS+ V H
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVH 147
Query: 139 RDXXXXX---XXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+D I DFGL+ E + D GT Y+APE+ +
Sbjct: 148 KDLKPENILFQDTSPHSPIKIIDFGLA---ELFKSDEHSTNAAGTALYMAPEVFKRDV-- 202
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWT------SPDLKWFI 249
K D+WS GVV++ L G LPF +L + + K Y+ P + +P +
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ---KATYKEPNYAVECRPLTPQAVDLL 259
Query: 250 GRLLDTDPATRITVDEILRDPWFKK 274
++L DP R + ++L WFK+
Sbjct: 260 KQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 128/270 (47%), Gaps = 25/270 (9%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKR----EISIMSRL 73
YEV IG G++ + R G+ + K + G +T K+ E++++ L
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY-----GSMTEAEKQMLVSEVNLLREL 62
Query: 74 RHPNIVKLYEVLA--TKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSRRYFQQLIS 126
+HPNIV+ Y+ + T +Y VME+ +GG+L + I+KG E+ R QL
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 127 AVEYCHSRG-----VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP 181
A++ CH R V HRD + DFGL+ + T GTP
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKTFVGTP 180
Query: 182 AYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY-RCPKW 240
Y++PE + + Y+ K D+WS G +L+ L A PF + + KI +G++ R P
Sbjct: 181 YYMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR 239
Query: 241 TSPDLKWFIGRLLDTDPATRITVDEILRDP 270
S +L I R+L+ R +V+EIL +P
Sbjct: 240 YSDELNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 126/252 (50%), Gaps = 9/252 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+ V R +G+ VA+K + +K R L + E+ IM +H N+V++Y+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFN---EVVIMRDYQHFNVVEMYK 109
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXX 143
+++ +MEF +GG L +S+ R +E+ + ++ A+ Y H++GV HRD
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKS 169
Query: 144 XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWS 203
+SDFG A + P L GTP ++APE++++ Y +VD+WS
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKR--KXLVGTPYWMAPEVISRSLY-ATEVDIWS 226
Query: 204 CGVVLFVLNAGYLP-FNDPNLMAM--YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
G+++ + G P F+D + AM R + + SP L+ F+ R+L DP R
Sbjct: 227 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQER 286
Query: 261 ITVDEILRDPWF 272
T E+L P+
Sbjct: 287 ATAQELLDHPFL 298
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 128/270 (47%), Gaps = 25/270 (9%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKR----EISIMSRL 73
YEV IG G++ + R G+ + K + G +T K+ E++++ L
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY-----GSMTEAEKQMLVSEVNLLREL 62
Query: 74 RHPNIVKLYEVLA--TKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSRRYFQQLIS 126
+HPNIV+ Y+ + T +Y VME+ +GG+L + I+KG E+ R QL
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 127 AVEYCHSRG-----VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP 181
A++ CH R V HRD + DFGL+ + + GTP
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DEDFAKEFVGTP 180
Query: 182 AYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY-RCPKW 240
Y++PE + + Y+ K D+WS G +L+ L A PF + + KI +G++ R P
Sbjct: 181 YYMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR 239
Query: 241 TSPDLKWFIGRLLDTDPATRITVDEILRDP 270
S +L I R+L+ R +V+EIL +P
Sbjct: 240 YSDELNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 127/270 (47%), Gaps = 25/270 (9%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKR----EISIMSRL 73
YEV IG G++ + R G+ + K + G +T K+ E++++ L
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY-----GSMTEAEKQMLVSEVNLLREL 62
Query: 74 RHPNIVKLYEVLA--TKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSRRYFQQLIS 126
+HPNIV+ Y+ + T +Y VME+ +GG+L + I+KG E+ R QL
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 127 AVEYCHSRG-----VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP 181
A++ CH R V HRD + DFGL+ + GTP
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKAFVGTP 180
Query: 182 AYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY-RCPKW 240
Y++PE + + Y+ K D+WS G +L+ L A PF + + KI +G++ R P
Sbjct: 181 YYMSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR 239
Query: 241 TSPDLKWFIGRLLDTDPATRITVDEILRDP 270
S +L I R+L+ R +V+EIL +P
Sbjct: 240 YSDELNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 31/282 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 66 TSQVLGLGINGKVLQIFNKRTQEKFALKXLQD--------CPKARREVELHWRASQCPHI 117
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + V E GGELF++I F+E+ + + + A++Y
Sbjct: 118 VRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYL 177
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXI---SDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI 188
HS + HRD I +DFG + ++ L T C TP YVAPE+
Sbjct: 178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTSHNSLTTPCYTPYYVAPEV 234
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMY----RKIYKGEYRCP--KWT- 241
L + YD + D WS GV+ ++L GY PF + +A+ +I G+Y P +W+
Sbjct: 235 LGPEKYDKS-CDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSE 293
Query: 242 -SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
S ++K I LL T+P R T+ E PW + K + P
Sbjct: 294 VSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTP 335
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 10/261 (3%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-RHPNIVKL 81
++G G+F KV T + AIK + K +++ E +++ L + P + +L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
+ T ++YFVME+ GG+L I + G+F E + Y ++ + + H RG+ +RD
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRD 145
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
I+DFG+ KE + CGTP Y+APEI+A + Y G VD
Sbjct: 146 LKLDNVMLDSEGHIKIADFGMC--KEHMMDGVTTREFCGTPDYIAPEIIAYQPY-GKSVD 202
Query: 201 MWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
W+ GV+L+ + AG PF+ + +++ I + PK S + L+ PA R
Sbjct: 203 WWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKR 262
Query: 261 ITVDEILRDPWFKKDYKERKF 281
+ P ++D +E F
Sbjct: 263 LGC-----GPEGERDVREHAF 278
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 17/283 (6%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
KY + IG G+F K ++ G+ IK ++ + + +RE+++++ ++HP
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR-MSSKEREESRREVAVLANMKHP 83
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR---FSEQLSRRYFQQLISAVEYCHS 133
NIV+ E +Y VM++ +GG+LF +I+ + F E +F Q+ A+++ H
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLC-GTPAYVAPEILAKK 192
R + HRD + DFG++ V + L C GTP Y++PEI K
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDFGIARV---LNSTVELARACIGTPYYLSPEICENK 200
Query: 193 GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWT---SPDLKWFI 249
Y+ K D+W+ G VL+ L F ++ + KI G + P + S DL+ +
Sbjct: 201 PYNN-KSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF--PPVSLHYSYDLRSLV 257
Query: 250 GRLLDTDPATRITVDEILRDPWFKKDYKERKFPH---EDFDLK 289
+L +P R +V+ IL + K ++ P E+F LK
Sbjct: 258 SQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLK 300
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 121/253 (47%), Gaps = 9/253 (3%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+ V TG+ VA+K + +K R L + E+ IM H N+V +Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN---EVVIMRDYHHDNVVDMYS 109
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXX 143
+++ VMEF +GG L ++ R +E+ ++ A+ Y H++GV HRD
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 169
Query: 144 XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWS 203
+SDFG A + P L GTP ++APE++++ Y G +VD+WS
Sbjct: 170 DSILLTSDGRIKLSDFGFCAQVSKEVPKR--KXLVGTPYWMAPEVISRLPY-GTEVDIWS 226
Query: 204 CGVVLFVLNAGYLP-FNDPNLMAMYRKIYKGEYRCPKW--TSPDLKWFIGRLLDTDPATR 260
G+++ + G P FN+P L AM R R S L+ F+ +L +P+ R
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQR 286
Query: 261 ITVDEILRDPWFK 273
T E+L P+ K
Sbjct: 287 ATAQELLGHPFLK 299
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 27/291 (9%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKRE 66
+I+ LF K E IG G+F +V+ G + RT Q VAIK + ++ +++E
Sbjct: 17 NIADPEELFTKLER---IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED--EIEDIQQE 71
Query: 67 ISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLIS 126
I+++S+ + K Y +K++ +ME+ GG + G F E ++++
Sbjct: 72 ITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILK 131
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSA--VKEQIRPDGMLHTLCGTPAYV 184
++Y HS HRD ++DFG++ QI+ + T GTP ++
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN----TFVGTPFWM 187
Query: 185 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPD 244
APE++ + YD +K D+WS G+ L G P +D + M + + PK P
Sbjct: 188 APEVIQQSAYD-SKADIWSLGITAIELAKGEPPNSDMHPMRVL-------FLIPKNNPPT 239
Query: 245 L--------KWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFD 287
L K FI L+ DP+ R T E+L+ + K+ K+ + E D
Sbjct: 240 LVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTELID 290
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 14/263 (5%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGG---LTAHVKREISIMSRLRHPNIV 79
++G G+F KV T + A+K + K +++ T KR +++ + P +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK--PPFLT 84
Query: 80 KLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFH 138
+L+ T ++YFVME+ GG+L I + GRF E + Y ++ + + S+G+ +
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIY 144
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAK 198
RD I+DFG+ KE I CGTP Y+APEI+A + Y G
Sbjct: 145 RDLKLDNVMLDSEGHIKIADFGMC--KENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GKS 201
Query: 199 VDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPA 258
VD W+ GV+L+ + AG PF + +++ I + PK S + L+ P
Sbjct: 202 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPG 261
Query: 259 TRITVDEILRDPWFKKDYKERKF 281
R+ P ++D KE F
Sbjct: 262 KRLGC-----GPEGERDIKEHAF 279
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 145/305 (47%), Gaps = 41/305 (13%)
Query: 13 NLFGKYE-----VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI 67
+L GK+E +++G GA+AKV +++ G+ A+K + KQ G + V RE+
Sbjct: 5 SLPGKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQA---GHSRSRVFREV 61
Query: 68 SIMSRLR-HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLI 125
+ + + + NI++L E + Y V E +GG + A I K + F+E+ + R + +
Sbjct: 62 ETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVA 121
Query: 126 SAVEYCHSRGVFHRDXXXXX---XXXXXXXXXXISDFGLSA---VKEQIRP--DGMLHTL 177
+A+++ H++G+ HRD I DF L + + P L T
Sbjct: 122 AALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP 181
Query: 178 CGTPAYVAPEILA----KKGYDGAKVDMWSCGVVLFVLNAGYLPFN---------DPNLM 224
CG+ Y+APE++ + + + D+WS GVVL+++ +GY PF D +
Sbjct: 182 CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEV 241
Query: 225 A------MYRKIYKGEYRCP--KWT--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
++ I +G+Y P W S + K I +LL D R++ ++L+ PW +
Sbjct: 242 CRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
Query: 275 DYKER 279
E+
Sbjct: 302 QAPEK 306
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 16/283 (5%)
Query: 3 DNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGG---L 59
DN G+ R+ + ++G G+F KV T + A+K + K +++
Sbjct: 330 DNNGN--RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVEC 387
Query: 60 TAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSR 118
T KR +++ + P + +L+ T ++YFVME+ GG+L I + GRF E +
Sbjct: 388 TMVEKRVLALPGK--PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAV 445
Query: 119 RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLC 178
Y ++ + + S+G+ +RD I+DFG+ KE I C
Sbjct: 446 FYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM--CKENIWDGVTTKXFC 503
Query: 179 GTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
GTP Y+APEI+A + Y G VD W+ GV+L+ + AG PF + +++ I + P
Sbjct: 504 GTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP 562
Query: 239 KWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
K S + L+ P R+ P ++D KE F
Sbjct: 563 KSMSKEAVAICKGLMTKHPGKRLGC-----GPEGERDIKEHAF 600
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 122/271 (45%), Gaps = 20/271 (7%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL 73
L+ KY + + +G G F V+ + ++ K V ++G VK+EISI++
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK----VKGTDQVLVKKEISILNIA 58
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR----YFQQLISAVE 129
RH NI+ L+E + ++ + EF G ++F +I+ F +L+ R Y Q+ A++
Sbjct: 59 RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQ 116
Query: 130 YCHSRGVFHRDXXXXXXXXXXXXXXXIS--DFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
+ HS + H D I +FG + Q++P L P Y APE
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQA---RQLKPGDNFRLLFTAPEYYAPE 173
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEY----RCPKWTSP 243
+ A DMWS G +++VL +G PF + I EY K S
Sbjct: 174 VHQHDVVSTA-TDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISI 232
Query: 244 DLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
+ F+ RLL + +R+T E L+ PW K+
Sbjct: 233 EAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 25/283 (8%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL 73
LF K E IG G+F +V+ G + RT + VAIK + ++ +++EI+++S+
Sbjct: 28 LFTKLEK---IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQC 82
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
P + K Y K++ +ME+ GG + G E ++++ ++Y HS
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 142
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSA--VKEQIRPDGMLHTLCGTPAYVAPEILAK 191
HRD ++DFG++ QI+ + T GTP ++APE++ +
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN----TFVGTPFWMAPEVIKQ 198
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYK-------GEYRCPKWTSPD 244
YD +K D+WS G+ L G P ++ + M + I K G Y P
Sbjct: 199 SAYD-SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP------ 251
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFD 287
LK F+ L+ +P+ R T E+L+ + ++ K+ + E D
Sbjct: 252 LKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELID 294
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 25/283 (8%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL 73
LF K E IG G+F +V+ G + RT + VAIK + ++ +++EI+++S+
Sbjct: 8 LFTKLEK---IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQC 62
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
P + K Y K++ +ME+ GG + G E ++++ ++Y HS
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSA--VKEQIRPDGMLHTLCGTPAYVAPEILAK 191
HRD ++DFG++ QI+ + T GTP ++APE++ +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN----TFVGTPFWMAPEVIKQ 178
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYK-------GEYRCPKWTSPD 244
YD +K D+WS G+ L G P ++ + M + I K G Y P
Sbjct: 179 SAYD-SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP------ 231
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFD 287
LK F+ L+ +P+ R T E+L+ + ++ K+ + E D
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELID 274
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-HPNIVKL 81
++G GA A+V N+ T Q A+K + KQ G + + V RE+ ++ + + H N+++L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
E + + Y V E +GG + + I K R F+E + Q + SA+++ H++G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 141 XXXXX---XXXXXXXXXXISDFGLSA---VKEQIRPDGM--LHTLCGTPAYVAPEILAKK 192
I DFGL + + P L T CG+ Y+APE++
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 193 GYDGA----KVDMWSCGVVLFVLNAGYLPF--------------NDPNLMAM-YRKIYKG 233
+ + + D+WS GV+L++L +GY PF P M + I +G
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 234 EYRCP--KWT--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
+Y P W S K I +LL D R++ ++L+ PW + E P
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLP 309
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 16/268 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI-LRGGLTAHVKREI--SIMSRLR 74
+ V +IIG G F +VY R TG+ A+K + K++I ++ G T + I S++S
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHS 133
P IV + T K+ F+++ GG+L +S+ G FSE R Y ++I +E+ H+
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 309
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
R V +RD ISD GL+ + +P H GT Y+APE+L K
Sbjct: 310 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGV 365
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMY---RKIYKGEYRCPKWTSPDLKWFIG 250
+ D +S G +LF L G+ PF + R P SP+L+ +
Sbjct: 366 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 425
Query: 251 RLLDTDPATRI-----TVDEILRDPWFK 273
LL D R+ E+ P+F+
Sbjct: 426 GLLQRDVNRRLGCLGRGAQEVKESPFFR 453
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 16/268 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI-LRGGLTAHVKREI--SIMSRLR 74
+ V +IIG G F +VY R TG+ A+K + K++I ++ G T + I S++S
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHS 133
P IV + T K+ F+++ GG+L +S+ G FSE R Y ++I +E+ H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
R V +RD ISD GL+ + +P H GT Y+APE+L K
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGV 366
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMY---RKIYKGEYRCPKWTSPDLKWFIG 250
+ D +S G +LF L G+ PF + R P SP+L+ +
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 251 RLLDTDPATRI-----TVDEILRDPWFK 273
LL D R+ E+ P+F+
Sbjct: 427 GLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 16/268 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI-LRGGLTAHVKREI--SIMSRLR 74
+ V +IIG G F +VY R TG+ A+K + K++I ++ G T + I S++S
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHS 133
P IV + T K+ F+++ GG+L +S+ G FSE R Y ++I +E+ H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
R V +RD ISD GL+ + +P H GT Y+APE+L K
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGV 366
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMY---RKIYKGEYRCPKWTSPDLKWFIG 250
+ D +S G +LF L G+ PF + R P SP+L+ +
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 251 RLLDTDPATRI-----TVDEILRDPWFK 273
LL D R+ E+ P+F+
Sbjct: 427 GLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 16/268 (5%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI-LRGGLTAHVKREI--SIMSRLR 74
+ V +IIG G F +VY R TG+ A+K + K++I ++ G T + I S++S
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHS 133
P IV + T K+ F+++ GG+L +S+ G FSE R Y ++I +E+ H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
R V +RD ISD GL+ + +P H GT Y+APE+L K
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGV 366
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMY---RKIYKGEYRCPKWTSPDLKWFIG 250
+ D +S G +LF L G+ PF + R P SP+L+ +
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE 426
Query: 251 RLLDTDPATRI-----TVDEILRDPWFK 273
LL D R+ E+ P+F+
Sbjct: 427 GLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 123/290 (42%), Gaps = 27/290 (9%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YE+ ++IG GA A V + VAIK ++ +K + +EI MS+ HPN
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHHPN 74
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKI---------SKGRFSEQLSRRYFQQLISAV 128
IV Y K +++ VM+ GG + I G E ++++ +
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 129 EYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQ---IRPDGMLHTLCGTPAYVA 185
EY H G HRD I+DFG+SA I + + T GTP ++A
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 186 PEILAK-KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPD 244
PE++ + +GYD K D+WS G+ L G P++ M + + + + D
Sbjct: 195 PEVMEQVRGYD-FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 253
Query: 245 ----------LKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHE 284
+ I L DP R T E+LR +F+K K ++F E
Sbjct: 254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK-AKNKEFLQE 302
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 25/283 (8%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL 73
LF K E IG G+F +V+ G + RT + VAIK + ++ +++EI+++S+
Sbjct: 23 LFTKLEK---IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQC 77
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
P + K Y K++ +ME+ GG + G E ++++ ++Y HS
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 137
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSA--VKEQIRPDGMLHTLCGTPAYVAPEILAK 191
HRD ++DFG++ QI+ + GTP ++APE++ +
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN----XFVGTPFWMAPEVIKQ 193
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYK-------GEYRCPKWTSPD 244
YD +K D+WS G+ L G P ++ + M + I K G Y P
Sbjct: 194 SAYD-SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP------ 246
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFD 287
LK F+ L+ +P+ R T E+L+ + ++ K+ + E D
Sbjct: 247 LKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELID 289
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 25/283 (8%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL 73
LF K E IG G+F +V+ G + RT + VAIK + ++ +++EI+++S+
Sbjct: 8 LFTKLEK---IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQC 62
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
P + K Y K++ +ME+ GG + G E ++++ ++Y HS
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSA--VKEQIRPDGMLHTLCGTPAYVAPEILAK 191
HRD ++DFG++ QI+ + GTP ++APE++ +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN----XFVGTPFWMAPEVIKQ 178
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYK-------GEYRCPKWTSPD 244
YD +K D+WS G+ L G P ++ + M + I K G Y P
Sbjct: 179 SAYD-SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP------ 231
Query: 245 LKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFD 287
LK F+ L+ +P+ R T E+L+ + ++ K+ + E D
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELID 274
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 118/280 (42%), Gaps = 26/280 (9%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YE+ ++IG GA A V + VAIK ++ +K + +EI MS+ HPN
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHHPN 69
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKI---------SKGRFSEQLSRRYFQQLISAV 128
IV Y K +++ VM+ GG + I G E ++++ +
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 129 EYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQ---IRPDGMLHTLCGTPAYVA 185
EY H G HRD I+DFG+SA I + + T GTP ++A
Sbjct: 130 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 186 PEILAK-KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPD 244
PE++ + +GYD K D+WS G+ L G P++ M + + + + D
Sbjct: 190 PEVMEQVRGYD-FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 248
Query: 245 ----------LKWFIGRLLDTDPATRITVDEILRDPWFKK 274
+ I L DP R T E+LR +F+K
Sbjct: 249 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 132/279 (47%), Gaps = 18/279 (6%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI 67
++R++N +E+ +G GAF KVY +N T A K + + L ++ EI
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYM-VEI 85
Query: 68 SIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQLI 125
I++ HPNIVKL + + ++ ++EF GG + A + + +E + +Q +
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 126 SAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
A+ Y H + HRD ++DFG+SA + R + GTP ++A
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMA 203
Query: 186 PEILA-----KKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE----YR 236
PE++ + YD K D+WS G+ L + P ++ N M + KI K E +
Sbjct: 204 PEVVMCETSKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 237 CPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKD 275
+W+S + K F+ + L+ + R T ++L+ P+ D
Sbjct: 263 PSRWSS-NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGXKYYSTAVD 186
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 244
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 136
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 137 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGXKYYSTAVD 193
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 194 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 251
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 252 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 132/279 (47%), Gaps = 18/279 (6%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI 67
++R++N +E+ +G GAF KVY +N T A K + + L ++ EI
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYM-VEI 85
Query: 68 SIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQLI 125
I++ HPNIVKL + + ++ ++EF GG + A + + +E + +Q +
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 126 SAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
A+ Y H + HRD ++DFG+SA + R + GTP ++A
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMA 203
Query: 186 PEILA-----KKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE----YR 236
PE++ + YD K D+WS G+ L + P ++ N M + KI K E +
Sbjct: 204 PEVVMCETSKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 237 CPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKD 275
+W+S + K F+ + L+ + R T ++L+ P+ D
Sbjct: 263 PSRWSS-NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-HPNIVKL 81
++G GA A+V N+ T Q A+K + KQ G + + V RE+ ++ + + H N+++L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
E + + Y V E +GG + + I K R F+E + Q + SA+++ H++G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 141 XXXXX---XXXXXXXXXXISDFGL-SAVK-----EQIRPDGMLHTLCGTPAYVAPEILAK 191
I DF L S +K I +L T CG+ Y+APE++
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL-TPCGSAEYMAPEVVEA 195
Query: 192 KGYDGA----KVDMWSCGVVLFVLNAGYLPF--------------NDPNLMAM-YRKIYK 232
+ + + D+WS GV+L++L +GY PF P M + I +
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 233 GEYRCP--KWT--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
G+Y P W S K I +LL D R++ ++L+ PW + E P
Sbjct: 256 GKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLP 309
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 129/263 (49%), Gaps = 12/263 (4%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKRE 66
D + +VN F +E+ + IG G+F KV + T + A+K ++KQK + +V +E
Sbjct: 7 DENEDVN-FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKE 65
Query: 67 ISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFSEQLSRRYFQQLI 125
+ IM L HP +V L+ + ++ V++ GG+L + + F E+ + + +L+
Sbjct: 66 LQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELV 125
Query: 126 SAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
A++Y ++ + HRD I+DF ++A+ + + + T+ GT Y+A
Sbjct: 126 MALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM---LPRETQITTMAGTKPYMA 182
Query: 186 PEILAKK---GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRC---PK 239
PE+ + + GY A VD WS GV + L G P++ + + ++ E P
Sbjct: 183 PEMFSSRKGAGYSFA-VDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPS 241
Query: 240 WTSPDLKWFIGRLLDTDPATRIT 262
S ++ + +LL+ +P R +
Sbjct: 242 AWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 130 KPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 244
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 72 VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 132 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 188
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 246
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDL 129
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 244
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 244
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 118/268 (44%), Gaps = 16/268 (5%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
++G G + VY GR++ +AIK + ++ + + EI++ L+H NIV+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 83 EVLATKAKIYFVMEFAKGGELFA----KISKGRFSEQLSRRYFQQLISAVEYCHSRGVFH 138
+ I ME GG L A K + +EQ Y +Q++ ++Y H + H
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 139 RDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAK--KGYD 195
RD ISDFG S I P T GT Y+APEI+ K +GY
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIIDKGPRGY- 202
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF---NDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
G D+WS G + + G PF +P ++K P+ S + K FI +
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKC 262
Query: 253 LDTDPATRITVDEILRDPWFKKDYKERK 280
+ DP R +++L D + K K++K
Sbjct: 263 FEPDPDKRACANDLLVDEFLKVSSKKKK 290
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 73 VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 247
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 243
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 121/284 (42%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 84 VLATKAKIYFVMEFA-KGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + F S L + Y QL+ + +CHS V HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 247
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 133
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 134 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGCKYYSTAVD 190
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 191 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 248
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 249 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 131 KPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 245
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 244
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 247
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 132 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 188
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 246
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 247
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 131/279 (46%), Gaps = 18/279 (6%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI 67
++R++N +E+ +G GAF KVY +N T A K + + L ++ EI
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYM-VEI 85
Query: 68 SIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQLI 125
I++ HPNIVKL + + ++ ++EF GG + A + + +E + +Q +
Sbjct: 86 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 126 SAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
A+ Y H + HRD ++DFG+SA + R GTP ++A
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMA 203
Query: 186 PEILA-----KKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE----YR 236
PE++ + YD K D+WS G+ L + P ++ N M + KI K E +
Sbjct: 204 PEVVMCETSKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 237 CPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKD 275
+W+S + K F+ + L+ + R T ++L+ P+ D
Sbjct: 263 PSRWSS-NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 133
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 134 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 190
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 191 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 248
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 249 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 132 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 188
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 246
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 244
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 244
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 243
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 243
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 131 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 245
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 131 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 245
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 132 KPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 188
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 246
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 244
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 243
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 71 VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 131 KPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 245
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 136
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 137 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGCKYYSTAVD 193
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 194 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 251
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 252 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 131 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 187
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 245
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 244
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 119/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 73 VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 133 KPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 247
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 132/278 (47%), Gaps = 24/278 (8%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI 67
+ R+++ +E+ +G GAF KVY +N TG A K + + L ++ EI
Sbjct: 11 VRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYI-VEI 67
Query: 68 SIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFA---KISKGRFSEQLSRRYFQQL 124
I++ HP IVKL K++ ++EF GG + A ++ +G Q+ + +Q+
Sbjct: 68 EILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI-QVVCRQM 126
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYV 184
+ A+ + HS+ + HRD ++DFG+SA + ++ + GTP ++
Sbjct: 127 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWM 184
Query: 185 APEI-----LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
APE+ + YD K D+WS G+ L + P ++ N M + KI K + P
Sbjct: 185 APEVVMCETMKDTPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD--PPT 241
Query: 240 WTSPDLKW------FIGRLLDTDPATRITVDEILRDPW 271
+P KW F+ LD +P TR + ++L P+
Sbjct: 242 LLTPS-KWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 278
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 132/278 (47%), Gaps = 24/278 (8%)
Query: 8 ISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI 67
+ R+++ +E+ +G GAF KVY +N TG A K + + L ++ EI
Sbjct: 3 VRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYI-VEI 59
Query: 68 SIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFA---KISKGRFSEQLSRRYFQQL 124
I++ HP IVKL K++ ++EF GG + A ++ +G Q+ + +Q+
Sbjct: 60 EILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI-QVVCRQM 118
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYV 184
+ A+ + HS+ + HRD ++DFG+SA + ++ + GTP ++
Sbjct: 119 LEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWM 176
Query: 185 APEI-----LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
APE+ + YD K D+WS G+ L + P ++ N M + KI K + P
Sbjct: 177 APEVVMCETMKDTPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD--PPT 233
Query: 240 WTSPDLKW------FIGRLLDTDPATRITVDEILRDPW 271
+P KW F+ LD +P TR + ++L P+
Sbjct: 234 LLTPS-KWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 270
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 137/304 (45%), Gaps = 29/304 (9%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKRE 66
D+S + G +E+ +++G G + +VY GR+V+TGQ AIK + + G +K+E
Sbjct: 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQE 70
Query: 67 ISIMSRL-RHPNIVKLYEVLATKA------KIYFVMEFAKGGEL--FAKISKGR-FSEQL 116
I+++ + H NI Y K +++ VMEF G + K +KG E+
Sbjct: 71 INMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW 130
Query: 117 SRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT 176
++++ + + H V HRD + DFG+SA + R G +T
Sbjct: 131 IAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD--RTVGRRNT 188
Query: 177 LCGTPAYVAPEILA-----KKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY 231
GTP ++APE++A YD K D+WS G+ + G P D + M I
Sbjct: 189 FIGTPYWMAPEVIACDENPDATYD-FKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP 247
Query: 232 KG---EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDL 288
+ + KW S + FI L + + R +++++ P+ + ER+ L
Sbjct: 248 RNPAPRLKSKKW-SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQV---RIQL 303
Query: 289 KDSV 292
KD +
Sbjct: 304 KDHI 307
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 24/274 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+F +VY G + T + VAIK + ++ +++EI+++S+ P I + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPYITRYFG 84
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXX 143
K++ +ME+ GG + G E ++++ ++Y HS HRD
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKA 144
Query: 144 XXXXXXXXXXXXISDFGLSA--VKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDM 201
++DFG++ QI+ + GTP ++APE++ + YD K D+
Sbjct: 145 ANVLLSEQGDVKLADFGVAGQLTDTQIKRN----XFVGTPFWMAPEVIKQSAYD-FKADI 199
Query: 202 WSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL--------KWFIGRLL 253
WS G+ L G P +D + M + + PK + P L K F+ L
Sbjct: 200 WSLGITAIELAKGEPPNSDLHPMRVL-------FLIPKNSPPTLEGQHSKPFKEFVEACL 252
Query: 254 DTDPATRITVDEILRDPWFKKDYKERKFPHEDFD 287
+ DP R T E+L+ + + K+ F E D
Sbjct: 253 NKDPRFRPTAKELLKHKFITRYTKKTSFLTELID 286
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 118/297 (39%), Gaps = 52/297 (17%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G +A VY G N TG VA+K V G + REIS+M L+H NIV+LY+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSR-------RYFQ-QLISAVEYCHSRG 135
V+ T+ K+ V EF K R R +YFQ QL+ + +CH
Sbjct: 71 VIHTENKLTLVFEFMDND--LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
+ HRD + DFGL+ + P + T Y AP++L
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLA--RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 196 GAKVDMWSCGVVLFVLNAG--------------------------------YLPFNDPNL 223
+D+WSCG +L + G LP +PN+
Sbjct: 187 STSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNI 246
Query: 224 MAM----YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDY 276
R++ + + P +L F+ LL +P R++ + L PWF + Y
Sbjct: 247 QQRPPRDLRQVLQPHTKEP--LDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY 301
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 118/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+ + + G+ + REIS++ L HPNIVKL +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 130 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGCKYYSTAVD 186
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 244
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 118/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+ + + G+ + REIS++ L HPNIVKL +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V EF + + L + Y QL+ + +CHS V HRD
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 243
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 120/284 (42%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 84 VLATKAKIYFVMEFA-KGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V E + + F S L + Y QL+ + +CHS V HRD
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVV-TLWYRAPEILLGCKYYSTAVD 185
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 243
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 118/284 (41%), Gaps = 40/284 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G + VY RN TG+ VA+K + + G+ + REIS++ L HPNIVKL +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 84 VLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V+ T+ K+Y V E + + L + Y QL+ + +CHS V HRD
Sbjct: 73 VIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 142 XXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVD 200
++DFGL+ A +R H + T Y APEIL Y VD
Sbjct: 133 KPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVV-TLWYRAPEILLGCKYYSTAVD 189
Query: 201 MWSCGVVL--FVLNAGYLPFNDP--NLMAMYRKI----------------YKGEYRCPKW 240
+WS G + V P + L ++R + YK + PKW
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF--PKW 247
Query: 241 TSPDL-----------KWFIGRLLDTDPATRITVDEILRDPWFK 273
D + + ++L DP RI+ L P+F+
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 130/314 (41%), Gaps = 60/314 (19%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI--LRGGLTAHVKREISIMSRLR 74
KY + IG G++ V +T AIK ++K KI + +K E+ +M +L
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI------SKGRFS--------------- 113
HPNI +LYEV + I VME GG L K+ S G+ +
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 114 --------------------EQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXX 153
E+L +Q+ SA+ Y H++G+ HRD
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS 206
Query: 154 XXIS--DFGLSAVKEQIRPD-----GMLHTLCGTPAYVAPEILAKKGYD-GAKVDMWSCG 205
I DFGLS KE + + GM T GTP +VAPE+L G K D WS G
Sbjct: 207 FEIKLVDFGLS--KEFYKLNNGEYYGMT-TKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 206 VVLFVLNAGYLPF---NDPNLMAMYRKIYKGEYRCPKWT--SPDLKWFIGRLLDTDPATR 260
V+L +L G +PF ND + ++ K + P + SP + + LL+ + R
Sbjct: 264 VLLHLLLMGAVPFPGVNDADTISQVLN-KKLCFENPNYNVLSPLARDLLSNLLNRNVDER 322
Query: 261 ITVDEILRDPWFKK 274
L+ PW +
Sbjct: 323 FDAMRALQHPWISQ 336
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 114/261 (43%), Gaps = 16/261 (6%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
++G G + VY GR++ +AIK + ++ + + EI++ L+H NIV+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 83 EVLATKAKIYFVMEFAKGGELFA----KISKGRFSEQLSRRYFQQLISAVEYCHSRGVFH 138
+ I ME GG L A K + +EQ Y +Q++ ++Y H + H
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 139 RDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAK--KGYD 195
RD ISDFG S I P T GT Y+APEI+ K +GY
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEIIDKGPRGY- 188
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF---NDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRL 252
G D+WS G + + G PF +P ++K P+ S + K FI +
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKC 248
Query: 253 LDTDPATRITVDEILRDPWFK 273
+ DP R +++L D + K
Sbjct: 249 FEPDPDKRACANDLLVDEFLK 269
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 177
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXEC 231
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVME-FAKGGELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E +LF I+ +G E+L+R +F Q++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 181
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 235
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 124
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 180
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 181 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 234
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 235 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 181
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 235
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 182
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 236
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 182
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 236
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 182
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 183 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 236
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 177
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 231
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 196
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 250
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 11/227 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+ K+IG GAF +V + + A+K ++K ++L+ TA + E ++
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLSRRYFQQLISAVEYCHSRG 135
I L+ +Y VM++ GG+L +SK R E+++R Y +++ A++ H
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT--LCGTPAYVAPEILAK-- 191
HRD ++DFG S +K + DG + + GTP Y++PEIL
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFG-SCLK--LMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 192 --KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR 236
KG G + D WS GV ++ + G PF +L+ Y KI + R
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER 299
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 209
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 263
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 197
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 251
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 224
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 278
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 160
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 216
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 217 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 270
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 271 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 196
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 197 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXEC 250
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 125/259 (48%), Gaps = 19/259 (7%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+ K+IG GAF++V + +TGQ A+K ++K +L+ G + + E ++
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLSRRYFQQLISAVEYCHSRG 135
I +L+ + +Y VME+ GG+L +SK R +++R Y +++ A++ H G
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTL--CGTPAYVAPEIL---- 189
HRD ++DFG S +K +R DG + +L GTP Y++PEIL
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFG-SCLK--LRADGTVRSLVAVGTPDYLSPEILQAVG 239
Query: 190 --AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI--YKGEYRCP---KWTS 242
G G + D W+ GV + + G PF + Y KI YK P +
Sbjct: 240 GGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVP 299
Query: 243 PDLKWFIGRLLDTDPATRI 261
+ + FI RLL P TR+
Sbjct: 300 EEARDFIQRLL-CPPETRL 317
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 197
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXEC 251
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 224
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXEC 278
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 148
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 204
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 205 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXEC 258
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 259 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 54 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 173
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 229
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 230 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXEC 283
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 284 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 311
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 197
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 198 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSXEC 251
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P R T +EI PW +
Sbjct: 252 QHLIRWCLALRPXDRPTFEEIQNHPWMQ 279
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 23/266 (8%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
++V + +G G++ VY + TGQ VAIK V + L+ + +EISIM + P+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-----EIIKEISIMQQCDSPH 85
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+VK Y ++ VME+ G + ++ +E Q + +EY H
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGML--HTLCGTPAYVAPEILAKKG 193
HRD ++DFG++ Q+ D M + + GTP ++APE++ + G
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAG---QLT-DXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY------KGEYRCPKWTSPDLKW 247
Y+ D+WS G+ + G P+ D + M R I+ +R P+ S +
Sbjct: 202 YNCV-ADIWSLGITAIEMAEGKPPYADIHPM---RAIFMIPTNPPPTFRKPELWSDNFTD 257
Query: 248 FIGRLLDTDPATRITVDEILRDPWFK 273
F+ + L P R T ++L+ P+ +
Sbjct: 258 FVKQCLVKSPEQRATATQLLQHPFVR 283
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 177
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I G+ + S +
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSSEC 231
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 209
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I G+ + S +
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSSEC 263
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 210
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I G+ + S +
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSSEC 264
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 210
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I G+ + S +
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSSEC 264
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
KY + IG G + VY +N G++ A+K + +K G+ + REISI+ L+H
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHS 60
Query: 77 NIVKLYEVLATKAKIYFVME-FAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NIVKLY+V+ TK ++ V E + + + +G ++ + QL++ + YCH R
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
V HRD I+DFGL+ A +R H + T Y AP++L
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR--KYTHEIV-TLWYRAPDVLMGSKK 177
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYR-------KIYKGEYRCPKW--- 240
+D+WS G + + G F LM ++R K + PK+
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 241 --TSPDLKW-------------FIGRLLDTDPATRITVDEILRDPWFKKD 275
L W + ++L DP RIT + L +FK++
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 209
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I G+ + S +
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSSEC 263
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 209
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I G+ + S +
Sbjct: 210 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSXEC 263
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 210
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I G+ + S +
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSXEC 264
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G F VY G V VAIK V K +I G + V E+ ++
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 210
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I G+ + S +
Sbjct: 211 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIGGQVFFRQRVSXEC 264
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 11/227 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+ K+IG GAF +V + T + A+K ++K ++L+ TA + E ++
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLSRRYFQQLISAVEYCHSRG 135
I L+ + +Y VM++ GG+L +SK + E ++R Y +++ A++ H
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT--LCGTPAYVAPEILAKK- 192
HRD ++DFG S +K + DG + + GTP Y++PEIL
Sbjct: 196 YVHRDIKPDNVLLDVNGHIRLADFG-SCLK--MNDDGTVQSSVAVGTPDYISPEILQAME 252
Query: 193 ---GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR 236
G G + D WS GV ++ + G PF +L+ Y KI E R
Sbjct: 253 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEER 299
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
KY + IG G + VY +N G++ A+K + +K G+ + REISI+ L+H
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHS 60
Query: 77 NIVKLYEVLATKAKIYFVME-FAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NIVKLY+V+ TK ++ V E + + + +G ++ + QL++ + YCH R
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
V HRD I+DFGL+ A +R H + T Y AP++L
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR--KYTHEVV-TLWYRAPDVLMGSKK 177
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYR-------KIYKGEYRCPKW--- 240
+D+WS G + + G F LM ++R K + PK+
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 241 --TSPDLKW-------------FIGRLLDTDPATRITVDEILRDPWFKKD 275
L W + ++L DP RIT + L +FK++
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 36/290 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
KY + IG G + VY +N G++ A+K + +K G+ + REISI+ L+H
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHS 60
Query: 77 NIVKLYEVLATKAKIYFVME-FAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NIVKLY+V+ TK ++ V E + + + +G ++ + QL++ + YCH R
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
V HRD I+DFGL+ A +R H + T Y AP++L
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR--KYTHEVV-TLWYRAPDVLMGSKK 177
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYR-------KIYKGEYRCPKW--- 240
+D+WS G + + G F LM ++R K + PK+
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 241 --TSPDLKW-------------FIGRLLDTDPATRITVDEILRDPWFKKD 275
L W + ++L DP RIT + L +FK++
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 109/227 (48%), Gaps = 11/227 (4%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E+ K+IG GAF +V + T + A+K ++K ++L+ TA + E ++
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLSRRYFQQLISAVEYCHSRG 135
I L+ + +Y VM++ GG+L +SK + E ++R Y +++ A++ H
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT--LCGTPAYVAPEILAKK- 192
HRD ++DFG S +K + DG + + GTP Y++PEIL
Sbjct: 212 YVHRDIKPDNVLLDVNGHIRLADFG-SCLK--MNDDGTVQSSVAVGTPDYISPEILQAME 268
Query: 193 ---GYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR 236
G G + D WS GV ++ + G PF +L+ Y KI E R
Sbjct: 269 DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEER 315
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 60/286 (20%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-PNI 78
+++G G KV N RT + A+K + +RE+ + R P+I
Sbjct: 22 TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 73
Query: 79 VKLYEVL----ATKAKIYFVMEFAKGGELFAKISK---GRFSEQLSRRYFQQLISAVEYC 131
V++ +V A + + VME GGELF++I F+E+ + + + A++Y
Sbjct: 74 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT-------LCGTPAYV 184
HS + HRD ++P+ +L+T L T
Sbjct: 134 HSINIAHRD---------------------------VKPENLLYTSKRPNAILKLTDFGF 166
Query: 185 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCP-- 238
A E +K YD + DMWS GV++++L GY PF + +A M +I G+Y P
Sbjct: 167 AKETTGEK-YDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 224
Query: 239 KWT--SPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFP 282
+W+ S ++K I LL T+P R+T+ E + PW + K + P
Sbjct: 225 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 270
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 132/283 (46%), Gaps = 27/283 (9%)
Query: 8 ISREVNLFGKYEVGKIIG-CGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKRE 66
++R++N +E IIG G F KVY +N T A K + + L ++ E
Sbjct: 4 VTRDLNPEDFWE---IIGELGDFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYM-VE 57
Query: 67 ISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQL 124
I I++ HPNIVKL + + ++ ++EF GG + A + + +E + +Q
Sbjct: 58 IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 117
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQI---RPDGMLHTLCGTP 181
+ A+ Y H + HRD ++DFG+SA + R D + GTP
Sbjct: 118 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI----GTP 173
Query: 182 AYVAPEILA-----KKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE-- 234
++APE++ + YD K D+WS G+ L + P ++ N M + KI K E
Sbjct: 174 YWMAPEVVMCETSKDRPYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPP 232
Query: 235 --YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKD 275
+ +W+S + K F+ + L+ + R T ++L+ P+ D
Sbjct: 233 TLAQPSRWSS-NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 274
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 36/288 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
KYE + IG G + V+ +N T + VA+K V G+ + REI ++ L+H
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHK 61
Query: 77 NIVKLYEVLATKAKIYFVMEFA-KGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NIV+L++VL + K+ V EF + + + G ++ + + QL+ + +CHSR
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
V HRD +++FGL+ A +R T Y P++L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR---CYSAEVVTLWYRPPDVLFGAKL 178
Query: 195 DGAKVDMWSCGVVLFVL-NAGYLPFNDPNLMAMYRKIYK--GEYRCPKWTS----PDLKW 247
+DMWS G + L NAG F ++ ++I++ G +W S PD K
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 248 F-----------------------IGRLLDTDPATRITVDEILRDPWF 272
+ + LL +P RI+ +E L+ P+F
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 36/288 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
KYE + IG G + V+ +N T + VA+K V G+ + REI ++ L+H
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHK 61
Query: 77 NIVKLYEVLATKAKIYFVMEFA-KGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
NIV+L++VL + K+ V EF + + + G ++ + + QL+ + +CHSR
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
V HRD ++DFGL+ A +R T Y P++L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR---CYSAEVVTLWYRPPDVLFGAKL 178
Query: 195 DGAKVDMWSCGVVLFVL-NAGYLPFNDPNLMAMYRKIYK--GEYRCPKWTS----PDLKW 247
+DMWS G + L NA F ++ ++I++ G +W S PD K
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 248 F-----------------------IGRLLDTDPATRITVDEILRDPWF 272
+ + LL +P RI+ +E L+ P+F
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 123/281 (43%), Gaps = 25/281 (8%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGG-LTAHVKREISIMSRLRH-PN 77
K +G G FA V + TGQ A K + K++ RG A + EI+++ + P
Sbjct: 33 TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR--RGQDCRAEILHEIAVLELAKSCPR 90
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSR----RYFQQLISAVEYCHS 133
++ L+EV ++I ++E+A GGE+F+ + +E +S R +Q++ V Y H
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFS-LCLPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 134 RGVFHRDXXXXXXXXXXXX---XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILA 190
+ H D I DFG+S +I L + GTP Y+APEIL
Sbjct: 150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS---RKIGHACELREIMGTPEYLAPEIL- 205
Query: 191 KKGYD--GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKW- 247
YD DMW+ G++ ++L PF + Y I + + T +
Sbjct: 206 --NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL 263
Query: 248 ---FIGRLLDTDPATRITVDEILRDPWFKK-DYKERKFPHE 284
FI LL +P R T + L W ++ D++ P E
Sbjct: 264 ATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEE 304
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 124/300 (41%), Gaps = 51/300 (17%)
Query: 14 LFGKYE-VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVK----REIS 68
+ KYE +GKI G G++ V+ RN TGQ VAIK K L +K REI
Sbjct: 1 MMEKYEKIGKI-GEGSYGVVFKCRNRDTGQIVAIK-----KFLESEDDPVIKKIALREIR 54
Query: 69 IMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLIS 126
++ +L+HPN+V L EV K +++ V E+ L + +G E L + Q +
Sbjct: 55 MLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG-VPEHLVKSITWQTLQ 113
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
AV +CH HRD + DFG + + P T Y +P
Sbjct: 114 AVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARL--LTGPSDYYDDEVATRWYRSP 171
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKI------------ 230
E+L G VD+W+ G V L +G +P +D + + + RK
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVF 230
Query: 231 -----YKG------------EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
+ G E + P + P L G L DP R+T +++L P+F+
Sbjct: 231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKG-CLHMDPTERLTCEQLLHHPYFE 289
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 7/206 (3%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLR 74
+YE +G G FA VY R+ T Q VAIK + + + G+ REI ++ L
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGG-ELFAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
HPNI+ L + K+ I V +F + E+ K + + + Y + +EY H
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
+ HRD ++DFGL+ K P+ T Y APE+L
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLA--KSFGSPNRAYXHQVVTRWYRAPELLFGAR 188
Query: 194 YDGAKVDMWSCGVVL--FVLNAGYLP 217
G VDMW+ G +L +L +LP
Sbjct: 189 MYGVGVDMWAVGCILAELLLRVPFLP 214
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 47/270 (17%)
Query: 21 GKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLRHPNI 78
G+++G G F + + TG+ + +K + + ++ R L +E+ +M L HPN+
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFL-----KEVKVMRCLEHPNV 69
Query: 79 VKLYEVLATKAKIYFVMEFAKGGELFAKI----SKGRFSEQLSRRYFQQLISAVEYCHSR 134
+K VL ++ F+ E+ KGG L I S+ +S+++S + + + S + Y HS
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS--FAKDIASGMAYLHSM 127
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLS--AVKEQIRPDGM----------LHTLCGTPA 182
+ HRD ++DFGL+ V E+ +P+G+ +T+ G P
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLFVL------NAGYLP------FNDPNLMAMYRKI 230
++APE++ + YD KVD++S G+VL + + YLP N + Y
Sbjct: 188 WMAPEMINGRSYD-EKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY--- 243
Query: 231 YKGEYRCPKWTSPDLKWFIGRLLDTDPATR 260
CP P R D DP R
Sbjct: 244 ------CPPNCPPSFFPITVRCCDLDPEKR 267
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 31/275 (11%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLR 74
++ ++IG G F +V GR G+ + A+ K L+GG T +RE SIM +
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAI---KTLKGGYTERQRREFLSEASIMGQFE 73
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCH 132
HPNI++L V+ + + EF + G L F +++ G+F+ + + S + Y
Sbjct: 74 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA 133
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEIL 189
HRD +SDFGLS E+ D + G + APE +
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 190 AKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWF 248
A + + A D WS G+V++ V++ G P+ D + + I + +YR P
Sbjct: 194 AFRKFTSAS-DAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-DYRLPP--------- 242
Query: 249 IGRLLDTDPATRITVDEILRDPWFKKDYKERKFPH 283
P ++ +++ D W K +FP
Sbjct: 243 -------PPDCPTSLHQLMLDCWQKDRNARPRFPQ 270
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 122/293 (41%), Gaps = 51/293 (17%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRH 75
+E ++G GAF +V RN + AIK + +++K+ + + E+ +++ L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL------STILSEVMLLASLNH 61
Query: 76 PNIVKLY-------------EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSR--RY 120
+V+ Y + K+ ++ ME+ + G L+ I ++Q R
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 121 FQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS----------AVKEQIRP 170
F+Q++ A+ Y HS+G+ HRD I DFGL+ + Q P
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 171 DGM--LHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFND-PNLMAMY 227
L + GT YVA E+L G+ K+DM+S G++ F + PF+ + +
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNIL 238
Query: 228 RKIYKGEYRCPKWTSPDL--------KWFIGRLLDTDPATRITVDEILRDPWF 272
+K+ P PD K I L+D DP R +L W
Sbjct: 239 KKLRSVSIEFP----PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
KYE IG G F +V+ R+ +TGQ VA+K V + + G REI I+ L+H
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKH 75
Query: 76 PNIVKLYEVLATKA--------KIYFVMEFAK---GGELFAKISKGRFSEQLSRRYFQQL 124
N+V L E+ TKA IY V +F + G L + K SE +R Q L
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 133
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS---AVKEQIRPDGMLHTLCGTP 181
++ + Y H + HRD ++DFGL+ ++ + +P+ + + T
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 192
Query: 182 AYVAPEILAKKGYDGAKVDMWSCGVVL 208
Y PE+L + G +D+W G ++
Sbjct: 193 WYRPPELLLGERDYGPPIDLWGAGCIM 219
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
KYE IG G F +V+ R+ +TGQ VA+K V + + G REI I+ L+H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKH 76
Query: 76 PNIVKLYEVLATKA--------KIYFVMEFAK---GGELFAKISKGRFSEQLSRRYFQQL 124
N+V L E+ TKA IY V +F + G L + K SE +R Q L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 134
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS---AVKEQIRPDGMLHTLCGTP 181
++ + Y H + HRD ++DFGL+ ++ + +P+ + + T
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 193
Query: 182 AYVAPEILAKKGYDGAKVDMWSCGVVL 208
Y PE+L + G +D+W G ++
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIM 220
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 31/275 (11%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLR 74
++ ++IG G F +V GR G+ + A+ K L+GG T +RE SIM +
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAI---KTLKGGYTERQRREFLSEASIMGQFE 75
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCH 132
HPNI++L V+ + + EF + G L F +++ G+F+ + + S + Y
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA 135
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEIL 189
HRD +SDFGLS E+ D + G + APE +
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 190 AKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWF 248
A + + A D WS G+V++ V++ G P+ D + + I + +YR P
Sbjct: 196 AFRKFTSAS-DAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-DYRLPP--------- 244
Query: 249 IGRLLDTDPATRITVDEILRDPWFKKDYKERKFPH 283
P ++ +++ D W K +FP
Sbjct: 245 -------PPDCPTSLHQLMLDCWQKDRNARPRFPQ 272
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
KYE IG G F +V+ R+ +TGQ VA+K V + + G REI I+ L+H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKH 76
Query: 76 PNIVKLYEVLATKA--------KIYFVMEFAK---GGELFAKISKGRFSEQLSRRYFQQL 124
N+V L E+ TKA IY V +F + G L + K SE +R Q L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 134
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS---AVKEQIRPDGMLHTLCGTP 181
++ + Y H + HRD ++DFGL+ ++ + +P+ + + T
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 193
Query: 182 AYVAPEILAKKGYDGAKVDMWSCGVVL 208
Y PE+L + G +D+W G ++
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIM 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
KYE IG G F +V+ R+ +TGQ VA+K V + + G REI I+ L+H
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQLLKH 76
Query: 76 PNIVKLYEVLAT--------KAKIYFVMEFAK---GGELFAKISKGRFSEQLSRRYFQQL 124
N+V L E+ T KA IY V +F + G L + K SE +R Q L
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 134
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS---AVKEQIRPDGMLHTLCGTP 181
++ + Y H + HRD ++DFGL+ ++ + +P+ + + T
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TL 193
Query: 182 AYVAPEILAKKGYDGAKVDMWSCGVVL 208
Y PE+L + G +D+W G ++
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIM 220
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 104/211 (49%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 12 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 67
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELFAKI--SKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +TK ++ V ++ +G L+ + S+ +F + +Q ++Y H+
Sbjct: 68 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
+ + HRD I DFGL+ VK + L G+ ++APE++ +
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 194 YD--GAKVDMWSCGVVLFVLNAGYLPFNDPN 222
+ + D+++ G+VL+ L G LP+++ N
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 217
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 89/201 (44%), Gaps = 20/201 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVK----REISIMSR 72
KYE ++G G++ V RN TG+ VAIK K L VK REI ++ +
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIK-----KFLESDDDKMVKKIAMREIKLLKQ 80
Query: 73 LRHPNIVKLYEVLATKAKIYFVMEFAKGG-----ELFAKISKGRFSEQLSRRYFQQLISA 127
LRH N+V L EV K + Y V EF ELF Q+ ++Y Q+I+
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP----NGLDYQVVQKYLFQIING 136
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
+ +CHS + HRD + DFG + + P + T Y APE
Sbjct: 137 IGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA--RTLAAPGEVYDDEVATRWYRAPE 194
Query: 188 ILAKKGYDGAKVDMWSCGVVL 208
+L G VD+W+ G ++
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLV 215
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 116/267 (43%), Gaps = 21/267 (7%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTA-HVKREISIMSRL 73
F + + +IIG G F KVY R G VA+KA T +V++E + + L
Sbjct: 6 FAELTLEEIIGIGGFGKVY--RAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
+HPNI+ L V + + VMEFA+GG L +S R + + Q+ + Y H
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 134 RG---VFHRDXXXXXXXXXXXX--------XXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
+ HRD I+DFGL+ +E R M + G A
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA--REWHRTTKM--SAAGAYA 179
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP-KWT 241
++APE++ + D+WS GV+L+ L G +PF + +A+ + + P T
Sbjct: 180 WMAPEVIRASMFSKGS-DVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPST 238
Query: 242 SPD-LKWFIGRLLDTDPATRITVDEIL 267
P+ + + DP +R + IL
Sbjct: 239 CPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 15/252 (5%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+F VY R+VR + VAIK +S + +E+ + +LRHPN ++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 84 VLATKAKIYFVMEFAKGGEL-FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXX 142
+ + VME+ G ++ K E + + Y HS + HRD
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 142
Query: 143 XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILA---KKGYDGAKV 199
+ DFG +++ + GTP ++APE++ + YDG KV
Sbjct: 143 AGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQYDG-KV 195
Query: 200 DMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE---YRCPKWTSPDLKWFIGRLLDTD 256
D+WS G+ L P + N M+ I + E + W S + F+ L
Sbjct: 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW-SEYFRNFVDSCLQKI 254
Query: 257 PATRITVDEILR 268
P R T + +L+
Sbjct: 255 PQDRPTSEVLLK 266
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 15/252 (5%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+F VY R+VR + VAIK +S + +E+ + +LRHPN ++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 84 VLATKAKIYFVMEFAKGGEL-FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXX 142
+ + VME+ G ++ K E + + Y HS + HRD
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 181
Query: 143 XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILA---KKGYDGAKV 199
+ DFG +++ + GTP ++APE++ + YDG KV
Sbjct: 182 AGNILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDG-KV 234
Query: 200 DMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE---YRCPKWTSPDLKWFIGRLLDTD 256
D+WS G+ L P + N M+ I + E + W S + F+ L
Sbjct: 235 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW-SEYFRNFVDSCLQKI 293
Query: 257 PATRITVDEILR 268
P R T + +L+
Sbjct: 294 PQDRPTSEVLLK 305
>pdb|2ZFD|B Chain B, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 123
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
Query: 300 KYLNAFDIIXXXXXXXXXXXXDDFNNNDAPFCNERFLSNETPEKILEKVEEVARLVADGD 359
+ +NAFDII D D ERF+S T E+++E++EE+ +
Sbjct: 4 RRMNAFDIISGSPGFNLSGLFGDARKYDRV---ERFVSAWTAERVVERLEEIV----SAE 56
Query: 360 RLAVTKKE-WGAKLEGQNGNFTMVIGIDRLTDDLVVVEIKKSMR---RGEENWKDKLRP 414
L V KKE WG K+EGQ GNF MV+ I++LTD+LV++E++K R G + W D LRP
Sbjct: 57 NLTVAKKETWGMKIEGQKGNFAMVVEINQLTDELVMIEVRKRQRAAASGRDLWTDTLRP 115
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 51/293 (17%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRH 75
+E ++G GAF +V RN + AIK + +++K+ + + E+ +++ L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL------STILSEVMLLASLNH 61
Query: 76 PNIVKLY-------------EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSR--RY 120
+V+ Y + K+ ++ ME+ + L+ I ++Q R
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 121 FQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS----------AVKEQIRP 170
F+Q++ A+ Y HS+G+ HRD I DFGL+ + Q P
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 171 DGM--LHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFND-PNLMAMY 227
L + GT YVA E+L G+ K+DM+S G++ F + PF+ + +
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNIL 238
Query: 228 RKIYKGEYRCPKWTSPDL--------KWFIGRLLDTDPATRITVDEILRDPWF 272
+K+ P PD K I L+D DP R +L W
Sbjct: 239 KKLRSVSIEFP----PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 24 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 79
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELFAKI--SKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +TK ++ V ++ +G L+ + S+ +F + +Q ++Y H+
Sbjct: 80 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
+ + HRD I DFGL+ K + L G+ ++APE++ +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 194 YD--GAKVDMWSCGVVLFVLNAGYLPFNDPN 222
+ + D+++ G+VL+ L G LP+++ N
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 35 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 90
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELF--AKISKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +TK ++ V ++ +G L+ I + +F +Q ++Y H+
Sbjct: 91 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI--LAK 191
+ + HRD I DFGL+ VK + L G+ ++APE+ +
Sbjct: 150 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN 222
K + D+++ G+VL+ L G LP+++ N
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 240
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 36 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 91
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELF--AKISKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +TK ++ V ++ +G L+ I + +F +Q ++Y H+
Sbjct: 92 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI--LAK 191
+ + HRD I DFGL+ VK + L G+ ++APE+ +
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN 222
K + D+++ G+VL+ L G LP+++ N
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 13 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 68
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELF--AKISKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +TK ++ V ++ +G L+ I + +F +Q ++Y H+
Sbjct: 69 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI--LAK 191
+ + HRD I DFGL+ VK + L G+ ++APE+ +
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN 222
K + D+++ G+VL+ L G LP+++ N
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 21/247 (8%)
Query: 7 DISREVNLFGK------YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
D +R V+ F K ++ ++IG G F +V GR G+ A+ K L+ G T
Sbjct: 28 DPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAI---KTLKVGYT 84
Query: 61 AHVKR----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSE 114
+R E SIM + HPN+V L V+ + V+EF + G L F + G+F+
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGML 174
+ + + + Y G HRD +SDFGLS V E P+ +
Sbjct: 145 IQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIED-DPEAVY 203
Query: 175 HTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIY 231
T G P + APE + + + A D+WS G+V++ V++ G P+ D + + + I
Sbjct: 204 TTTGGKIPVRWTAPEAIQYRKFTSAS-DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE 262
Query: 232 KGEYRCP 238
+G YR P
Sbjct: 263 EG-YRLP 268
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 13 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 68
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELF--AKISKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +TK ++ V ++ +G L+ I + +F +Q ++Y H+
Sbjct: 69 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI--LAK 191
+ + HRD I DFGL+ VK + L G+ ++APE+ +
Sbjct: 128 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN 222
K + D+++ G+VL+ L G LP+++ N
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 8 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 63
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELF--AKISKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +TK ++ V ++ +G L+ I + +F +Q ++Y H+
Sbjct: 64 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI--LAK 191
+ + HRD I DFGL+ VK + L G+ ++APE+ +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN 222
K + D+++ G+VL+ L G LP+++ N
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 10 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 65
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELF--AKISKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +TK ++ V ++ +G L+ I + +F +Q ++Y H+
Sbjct: 66 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI--LAK 191
+ + HRD I DFGL+ VK + L G+ ++APE+ +
Sbjct: 125 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN 222
K + D+++ G+VL+ L G LP+++ N
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKR----EISIMSRLR 74
++ K+IG G F +V GR G+ A+ K L+ G T +R E SIM +
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAI---KTLKAGYTDKQRRDFLSEASIMGQFD 88
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCH 132
HPNI+ L V+ + + E+ + G L F + + GRF+ + + S ++Y
Sbjct: 89 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 148
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA--YVAPEILA 190
HRD +SDFG+S V E P+ T G + APE +A
Sbjct: 149 DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 191 KKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+ + A D+WS G+V++ V++ G P+ D + + + I +G YR P
Sbjct: 208 YRKFTSAS-DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLP 254
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKR----EISIMSRLR 74
++ K+IG G F +V GR G+ A+ K L+ G T +R E SIM +
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAI---KTLKAGYTDKQRRDFLSEASIMGQFD 73
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCH 132
HPNI+ L V+ + + E+ + G L F + + GRF+ + + S ++Y
Sbjct: 74 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA--YVAPEILA 190
HRD +SDFG+S V E P+ T G + APE +A
Sbjct: 134 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 191 KKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+ + A D+WS G+V++ V++ G P+ D + + + I +G YR P
Sbjct: 193 YRKFTSAS-DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLP 239
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 24 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 79
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELFAKI--SKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +T ++ V ++ +G L+ + S+ +F + +Q ++Y H+
Sbjct: 80 VNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKG 193
+ + HRD I DFGL+ K + L G+ ++APE++ +
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 194 YD--GAKVDMWSCGVVLFVLNAGYLPFNDPN 222
+ + D+++ G+VL+ L G LP+++ N
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRG--GLTAHVKREISIMSRL 73
+YE IG GA+ VY R+ +G VA+K+V ++ G GL RE++++ RL
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRL 60
Query: 74 ---RHPNIVKLYEVLAT-----KAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQ 123
HPN+V+L +V AT + K+ V E K + + +Q
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKE-QIRPDGMLHTLCGTPA 182
+ +++ H+ + HRD ++DFGL+ + Q+ D ++ TL
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLW---- 176
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVL 208
Y APE+L + Y VDMWS G +
Sbjct: 177 YRAPEVLLQSTY-ATPVDMWSVGCIF 201
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKR----EISIMSRLR 74
++ K+IG G F +V GR G+ A+ K L+ G T +R E SIM +
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAI---KTLKAGYTDKQRRDFLSEASIMGQFD 67
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCH 132
HPNI+ L V+ + + E+ + G L F + + GRF+ + + S ++Y
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA--YVAPEILA 190
HRD +SDFG+S V E P+ T G + APE +A
Sbjct: 128 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 191 KKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+ + A D+WS G+V++ V++ G P+ D + + + I +G YR P
Sbjct: 187 YRKFTSAS-DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLP 233
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 19/260 (7%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIV 79
+G+ IG G F +V+ GR VA+K S ++ L L A +E I+ + HPNIV
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVK--SCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 80 KLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
+L V K IY VME +GG+ F + R + + + +EY S+
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCG---TPA-YVAPEILAKKG 193
HRD ISDFG+S +E+ DG+ G P + APE L
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMS--REEA--DGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 194 YDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIY---KGEYRCPKWTSPDLKWFI 249
Y ++ D+WS G++L+ + G P+ PNL + + G CP+ + +
Sbjct: 292 YS-SESDVWSFGILLWETFSLGASPY--PNLSNQQTREFVEKGGRLPCPELCPDAVFRLM 348
Query: 250 GRLLDTDPATRITVDEILRD 269
+ +P R + I ++
Sbjct: 349 EQCWAYEPGQRPSFSTIYQE 368
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 8 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 63
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELF--AKISKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +T ++ V ++ +G L+ I + +F +Q ++Y H+
Sbjct: 64 VNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI--LAK 191
+ + HRD I DFGL+ VK + L G+ ++APE+ +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN 222
K + D+++ G+VL+ L G LP+++ N
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 19/260 (7%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIV 79
+G+ IG G F +V+ GR VA+K S ++ L L A +E I+ + HPNIV
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVK--SCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 80 KLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
+L V K IY VME +GG+ F + R + + + +EY S+
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCG---TPA-YVAPEILAKKG 193
HRD ISDFG+S +E+ DG+ G P + APE L
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMS--REEA--DGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 194 YDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIY---KGEYRCPKWTSPDLKWFI 249
Y ++ D+WS G++L+ + G P+ PNL + + G CP+ + +
Sbjct: 292 YS-SESDVWSFGILLWETFSLGASPY--PNLSNQQTREFVEKGGRLPCPELCPDAVFRLM 348
Query: 250 GRLLDTDPATRITVDEILRD 269
+ +P R + I ++
Sbjct: 349 EQCWAYEPGQRPSFSTIYQE 368
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 28 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 83
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELF--AKISKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +TK ++ V ++ +G L+ I + +F +Q ++Y H+
Sbjct: 84 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI--LAK 191
+ + HRD I DFGL+ K + L G+ ++APE+ +
Sbjct: 143 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN 222
K + D+++ G+VL+ L G LP+++ N
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 233
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 36 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 91
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELF--AKISKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +TK ++ V ++ +G L+ I + +F +Q ++Y H+
Sbjct: 92 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI--LAK 191
+ + HRD I DFGL+ K + L G+ ++APE+ +
Sbjct: 151 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN 222
K + D+++ G+VL+ L G LP+++ N
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 88/205 (42%), Gaps = 12/205 (5%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+F V+ R G VA+K + +Q RE++IM RLRHPNIV
Sbjct: 45 IGAGSFGTVH--RAEWHGSDVAVKILMEQD-FHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR----YFQQLISAVEYCHSRG--VF 137
+ + V E+ G L+ + K EQL R + + Y H+R +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
HRD + DFGLS +K GTP ++APE+L +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS--KXAAGTPEWMAPEVL-RDEPSNE 218
Query: 198 KVDMWSCGVVLFVLNAGYLPFNDPN 222
K D++S GV+L+ L P+ + N
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLN 243
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G+ VG+ IG G+F VY G+ VA+K ++ L A K E+ ++ + RH
Sbjct: 8 GQITVGQRIGSGSFGTVYKGK---WHGDVAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRH 63
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELF--AKISKGRFSEQLSRRYFQQLISAVEYCHS 133
NI+ L+ +TK ++ V ++ +G L+ I + +F +Q ++Y H+
Sbjct: 64 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEI--LAK 191
+ + HRD I DFGL+ K + L G+ ++APE+ +
Sbjct: 123 KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN 222
K + D+++ G+VL+ L G LP+++ N
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 12/205 (5%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+F V+ R G VA+K + +Q RE++IM RLRHPNIV
Sbjct: 45 IGAGSFGTVH--RAEWHGSDVAVKILMEQD-FHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR----YFQQLISAVEYCHSRG--VF 137
+ + V E+ G L+ + K EQL R + + Y H+R +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
HR+ + DFGLS +K + GTP ++APE+L +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS--KSAAGTPEWMAPEVL-RDEPSNE 218
Query: 198 KVDMWSCGVVLFVLNAGYLPFNDPN 222
K D++S GV+L+ L P+ + N
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLN 243
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 7/213 (3%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
+L +YE+G+I+G G ++V+ R++R + VA+K + +RE +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 73 LRHPNIVKLYEVLATKAKI----YFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISA 127
L HP IV +Y+ + Y VME+ G L + ++G + + + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAP 186
+ + H G+ HRD + DFG++ A+ + + GT Y++P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFN 219
E D A+ D++S G VL+ + G PF
Sbjct: 189 EQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 11/258 (4%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
+L +YE+G+I+G G ++V+ R++R + VA+K + +RE +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 73 LRHPNIVKLYEVLATKAKI----YFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISA 127
L HP IV +Y+ + Y VME+ G L + ++G + + + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAP 186
+ + H G+ HRD + DFG++ A+ + + GT Y++P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP----KWTS 242
E D A+ D++S G VL+ + G PF + +++ + + + P + S
Sbjct: 189 EQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247
Query: 243 PDLKWFIGRLLDTDPATR 260
DL + + L +P R
Sbjct: 248 ADLDAVVLKALAKNPENR 265
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 23/220 (10%)
Query: 16 GKYEVGKII----------GCGAFAKVYHGRNVRTGQSVAIKAV-----SKQKILRGGLT 60
G + +GKII G G + VY + VAIKA+ K++ L+
Sbjct: 1 GSHMIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLK---- 56
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRR 119
+RE+ S+L H NIV + +V Y VME+ +G L I S G S +
Sbjct: 57 -RFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAIN 115
Query: 120 YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCG 179
+ Q++ +++ H + HRD I DFG++ + H L G
Sbjct: 116 FTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL-G 174
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFN 219
T Y +PE + D D++S G+VL+ + G PFN
Sbjct: 175 TVQYFSPEQAKGEATDEC-TDIYSIGIVLYEMLVGEPPFN 213
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 11/258 (4%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
+L +YE+G+I+G G ++V+ R++R + VA+K + +RE +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 73 LRHPNIVKLYEVLATKAKI----YFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISA 127
L HP IV +Y+ + Y VME+ G L + ++G + + + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAP 186
+ + H G+ HRD + DFG++ A+ + + GT Y++P
Sbjct: 129 LNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP 188
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP----KWTS 242
E D A+ D++S G VL+ + G PF + +++ + + + P + S
Sbjct: 189 EQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247
Query: 243 PDLKWFIGRLLDTDPATR 260
DL + + L +P R
Sbjct: 248 ADLDAVVLKALAKNPENR 265
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 108/242 (44%), Gaps = 22/242 (9%)
Query: 9 SREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQ---SVAIKAVSKQKILRGGLTAHVKR 65
+RE+ + + KIIG G +V +GR GQ VAIKA L+ G T +R
Sbjct: 43 TREIEA-SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKA------LKAGYTERQRR 95
Query: 66 ----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRR 119
E SIM + HPNI++L V+ V E+ + G L F + G+F+
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVG 155
Query: 120 YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCG 179
+ + + + Y G HRD +SDFGLS V E PD T G
Sbjct: 156 MLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED-DPDAAXTTTGG 214
Query: 180 TPA--YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR 236
+ APE +A + + A D+WS GVV++ VL G P+ + + + +G YR
Sbjct: 215 KIPIRWTAPEAIAFRTFSSAS-DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YR 272
Query: 237 CP 238
P
Sbjct: 273 LP 274
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 11/258 (4%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
+L +YE+G+I+G G ++V+ R++R + VA+K + +RE +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 73 LRHPNIVKLYEVLATKAKI----YFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISA 127
L HP IV +Y+ + Y VME+ G L + ++G + + + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAP 186
+ + H G+ HRD + DFG++ A+ + + GT Y++P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP----KWTS 242
E D A+ D++S G VL+ + G PF + +++ + + + P + S
Sbjct: 189 EQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247
Query: 243 PDLKWFIGRLLDTDPATR 260
DL + + L +P R
Sbjct: 248 ADLDAVVLKALAKNPENR 265
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 108/242 (44%), Gaps = 22/242 (9%)
Query: 9 SREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQ---SVAIKAVSKQKILRGGLTAHVKR 65
+RE+ + + KIIG G +V +GR GQ VAIKA L+ G T +R
Sbjct: 43 TREIEA-SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKA------LKAGYTERQRR 95
Query: 66 ----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRR 119
E SIM + HPNI++L V+ V E+ + G L F + G+F+
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVG 155
Query: 120 YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCG 179
+ + + + Y G HRD +SDFGLS V E PD T G
Sbjct: 156 MLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED-DPDAAYTTTGG 214
Query: 180 TPA--YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR 236
+ APE +A + + A D+WS GVV++ VL G P+ + + + +G YR
Sbjct: 215 KIPIRWTAPEAIAFRTFSSAS-DVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YR 272
Query: 237 CP 238
P
Sbjct: 273 LP 274
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 112/258 (43%), Gaps = 11/258 (4%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
+L +YE+G+I+G G ++V+ R++R + VA+K + +RE +
Sbjct: 26 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 85
Query: 73 LRHPNIVKLYEVLATKAKI----YFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISA 127
L HP IV +Y+ + Y VME+ G L + ++G + + + A
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 145
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAP 186
+ + H G+ HRD + DFG++ A+ + + GT Y++P
Sbjct: 146 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 205
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP----KWTS 242
E D A+ D++S G VL+ + G PF + +++ + + + P + S
Sbjct: 206 EQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 264
Query: 243 PDLKWFIGRLLDTDPATR 260
DL + + L +P R
Sbjct: 265 ADLDAVVLKALAKNPENR 282
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH---VKREISIM 70
L +Y+VG ++G G VY G V VAIK V K +I G + V E+ ++
Sbjct: 49 LESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 71 SRLRH--PNIVKLYEVLATKAKIYFVMEFAKG-GELFAKIS-KGRFSEQLSRRYFQQLIS 126
++ +++L + ++E + +LF I+ +G E+L+R +F Q++
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
AV +CH+ GV HRD + DFG A+ + D + GT Y
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGTRVYSP 224
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDL 245
PE + Y G +WS G++L+ + G +PF +I +G+ + S +
Sbjct: 225 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC 278
Query: 246 KWFIGRLLDTDPATRITVDEILRDPWFK 273
+ I L P+ R T +EI PW +
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 27/250 (10%)
Query: 7 DISREVNLFGK------YEVGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRG 57
D ++ V+ F K + K++G G F +V GR + SVAIK L+
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKV 83
Query: 58 GLTAHVKR----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGR 111
G T +R E SIM + HPNI++L V+ + V E+ + G L F + +
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 112 FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
F+ + + S ++Y G HRD +SDFGLS V E P+
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPE 202
Query: 172 GMLHTLCGTPA--YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYR 228
T G + +PE +A + + A D+WS G+VL+ V++ G P+ + + + +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 229 KIYKGEYRCP 238
+ +G YR P
Sbjct: 262 AVDEG-YRLP 270
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRG--GLTAHVKREISIMSRL 73
+YE IG GA+ VY R+ +G VA+K+V ++ G GL RE++++ RL
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRL 60
Query: 74 ---RHPNIVKLYEVLAT-----KAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQ 123
HPN+V+L +V AT + K+ V E K + + +Q
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY 183
+ +++ H+ + HRD ++DFGL+ + L + T Y
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALFPVVVTLWY 177
Query: 184 VAPEILAKKGYDGAKVDMWSCGVVL 208
APE+L + Y VDMWS G +
Sbjct: 178 RAPEVLLQSTY-ATPVDMWSVGCIF 201
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 106/231 (45%), Gaps = 21/231 (9%)
Query: 20 VGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRGGLTAHVKR----EISIMSR 72
+ K++G G F +V GR + SVAIK L+ G T +R E SIM +
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKVGYTEKQRRDFLGEASIMGQ 73
Query: 73 LRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEY 130
HPNI++L V+ + V E+ + G L F + +F+ + + S ++Y
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 131 CHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA--YVAPEI 188
G HRD +SDFGLS V E P+ T G + +PE
Sbjct: 134 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEA 192
Query: 189 LAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+A + + A D+WS G+VL+ V++ G P+ + + + + + +G YR P
Sbjct: 193 IAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLP 241
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKR----EISIMSRLRH 75
+ ++IG G F +V GR G+ A+ K L+ G T +R E SIM + H
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAI---KTLKVGYTEKQRRDFLGEASIMGQFDH 82
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
PNI+ L V+ + V E+ + G L F K + G+F+ + + + ++Y
Sbjct: 83 PNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD 142
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA--YVAPEILAK 191
G HRD +SDFGLS V E P+ T G + APE +A
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+ + A D+WS G+V++ V++ G P+ + + + + +G YR P
Sbjct: 202 RKFTSAS-DVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG-YRLP 247
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 27/250 (10%)
Query: 7 DISREVNLFGK------YEVGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRG 57
D ++ V+ F K + K++G G F +V GR + SVAIK L+
Sbjct: 28 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKV 81
Query: 58 GLTAHVKR----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGR 111
G T +R E SIM + HPNI++L V+ + V E+ + G L F + +
Sbjct: 82 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 141
Query: 112 FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
F+ + + S ++Y G HRD +SDFGLS V E P+
Sbjct: 142 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPE 200
Query: 172 GMLHTLCGTPA--YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYR 228
T G + +PE +A + + A D+WS G+VL+ V++ G P+ + + + +
Sbjct: 201 AAYTTRGGKIPIRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIK 259
Query: 229 KIYKGEYRCP 238
+ +G YR P
Sbjct: 260 AVDEG-YRLP 268
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRG--GLTAHVKREISIMSRL 73
+YE IG GA+ VY R+ +G VA+K+V ++ G GL RE++++ RL
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRL 60
Query: 74 ---RHPNIVKLYEVLAT-----KAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQ 123
HPN+V+L +V AT + K+ V E K + + +Q
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY 183
+ +++ H+ + HRD ++DFGL+ + L + T Y
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALAPVVVTLWY 177
Query: 184 VAPEILAKKGYDGAKVDMWSCGVVL 208
APE+L + Y VDMWS G +
Sbjct: 178 RAPEVLLQSTY-ATPVDMWSVGCIF 201
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 27/250 (10%)
Query: 7 DISREVNLFGK------YEVGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRG 57
D ++ V+ F K + K++G G F +V GR + SVAIK L+
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKV 83
Query: 58 GLTAHVKR----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGR 111
G T +R E SIM + HPNI++L V+ + V E+ + G L F + +
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 112 FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
F+ + + S ++Y G HRD +SDFGLS V E P+
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPE 202
Query: 172 GMLHTLCGTPA--YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYR 228
T G + +PE +A + + A D+WS G+VL+ V++ G P+ + + + +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 229 KIYKGEYRCP 238
+ +G YR P
Sbjct: 262 AVDEG-YRLP 270
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 27/250 (10%)
Query: 7 DISREVNLFGK------YEVGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRG 57
D ++ V+ F K + K++G G F +V GR + SVAIK L+
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKV 83
Query: 58 GLTAHVKR----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGR 111
G T +R E SIM + HPNI++L V+ + V E+ + G L F + +
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 112 FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
F+ + + S ++Y G HRD +SDFGLS V E P+
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPE 202
Query: 172 GMLHTLCGTPA--YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYR 228
T G + +PE +A + + A D+WS G+VL+ V++ G P+ + + + +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 229 KIYKGEYRCP 238
+ +G YR P
Sbjct: 262 AVDEG-YRLP 270
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 27/250 (10%)
Query: 7 DISREVNLFGK------YEVGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRG 57
D ++ V+ F K + K++G G F +V GR + SVAIK L+
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKV 83
Query: 58 GLTAHVKR----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGR 111
G T +R E SIM + HPNI++L V+ + V E+ + G L F + +
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 112 FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
F+ + + S ++Y G HRD +SDFGLS V E P+
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPE 202
Query: 172 GMLHTLCGTPA--YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYR 228
T G + +PE +A + + A D+WS G+VL+ V++ G P+ + + + +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 229 KIYKGEYRCP 238
+ +G YR P
Sbjct: 262 AVDEG-YRLP 270
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 27/250 (10%)
Query: 7 DISREVNLFGK------YEVGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRG 57
D ++ V+ F K + K++G G F +V GR + SVAIK L+
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKV 83
Query: 58 GLTAHVKR----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGR 111
G T +R E SIM + HPNI++L V+ + V E+ + G L F + +
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 112 FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
F+ + + S ++Y G HRD +SDFGLS V E P+
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPE 202
Query: 172 GMLHTLCGTPA--YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYR 228
T G + +PE +A + + A D+WS G+VL+ V++ G P+ + + + +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 229 KIYKGEYRCP 238
+ +G YR P
Sbjct: 262 AVDEG-YRLP 270
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 11/258 (4%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
+L +YE+G+I+G G ++V+ R++R + VA+K + +RE +
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 73 LRHPNIVKLYEVLATKAKI----YFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISA 127
L HP IV +Y + Y VME+ G L + ++G + + + A
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAP 186
+ + H G+ HRD + DFG++ A+ + + GT Y++P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP----KWTS 242
E D A+ D++S G VL+ + G PF + +++ + + + P + S
Sbjct: 189 EQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247
Query: 243 PDLKWFIGRLLDTDPATR 260
DL + + L +P R
Sbjct: 248 ADLDAVVLKALAKNPENR 265
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G +A VY G++ T VA+K + + G RE+S++ L+H NIV L++
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 84 VLATKAKIYFVMEFA-KGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXX 142
++ T+ + V E+ K + + + + + QL+ + YCH + V HRD
Sbjct: 68 IIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK 127
Query: 143 XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMW 202
++DFGL+ K P T Y P+IL ++DMW
Sbjct: 128 PQNLLINERGELKLADFGLARAKSI--PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMW 185
Query: 203 SCGVVLFVLNAG 214
G + + + G
Sbjct: 186 GVGCIFYEMATG 197
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 21/232 (9%)
Query: 19 EVGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRGGLTAHVKR----EISIMS 71
+ K++G G F +V GR + SVAIK L+ G T +R E SIM
Sbjct: 36 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKVGYTEKQRRDFLGEASIMG 89
Query: 72 RLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVE 129
+ HPNI++L V+ + V E+ + G L F + +F+ + + S ++
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 149
Query: 130 YCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA--YVAPE 187
Y G HRD +SDFGLS V E P+ T G + +PE
Sbjct: 150 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPE 208
Query: 188 ILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+A + + A D+WS G+VL+ V++ G P+ + + + + + +G YR P
Sbjct: 209 AIAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLP 258
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 14/215 (6%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G GA+ V + R+G+ VAIK +S+ RE+ ++ ++H N++ L +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 84 VLATKAKI------YFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
V + + Y VM F + KI +FSE+ + Q++ ++Y HS GV
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
HRD I DFGL+ D + T Y APE++ +
Sbjct: 149 HRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQ 203
Query: 198 KVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYK 232
VD+WS G ++ + G F + + +I K
Sbjct: 204 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 238
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G +E+ + +G G F V + TG+ VAIK ++ L EI IM +L H
Sbjct: 15 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNH 72
Query: 76 PNIVKLYEV------LATKAKIYFVMEFAKGGELFAKISKGR----FSEQLSRRYFQQLI 125
PN+V EV LA ME+ +GG+L +++ E R +
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 132
Query: 126 SAVEYCHSRGVFHRDXXXXXXXXXXXXXXXIS---DFGLSAVKEQIRPDGMLHT-LCGTP 181
SA+ Y H + HRD I D G + +Q G L T GT
Sbjct: 133 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ----GELCTEFVGTL 188
Query: 182 AYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF 218
Y+APE+L +K Y VD WS G + F G+ PF
Sbjct: 189 QYLAPELLEQKKYT-VTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH 75
G +E+ + +G G F V + TG+ VAIK ++ L EI IM +L H
Sbjct: 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNH 71
Query: 76 PNIVKLYEV------LATKAKIYFVMEFAKGGELFAKISKGR----FSEQLSRRYFQQLI 125
PN+V EV LA ME+ +GG+L +++ E R +
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 126 SAVEYCHSRGVFHRDXXXXXXXXXXXXXXXIS---DFGLSAVKEQIRPDGMLHT-LCGTP 181
SA+ Y H + HRD I D G + +Q G L T GT
Sbjct: 132 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ----GELCTEFVGTL 187
Query: 182 AYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF 218
Y+APE+L +K Y VD WS G + F G+ PF
Sbjct: 188 QYLAPELLEQKKYT-VTVDYWSFGTLAFECITGFRPF 223
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 27/250 (10%)
Query: 7 DISREVNLFGK------YEVGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRG 57
D ++ V+ F K + K++G G F +V GR + SVAIK L+
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKV 83
Query: 58 GLTAHVKR----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGR 111
G T +R E SIM + HPNI++L V+ + V E + G L F + +
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ 143
Query: 112 FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
F+ + + S ++Y G HRD +SDFGLS V E P+
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPE 202
Query: 172 GMLHTLCGTPA--YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYR 228
T G + +PE +A + + A D+WS G+VL+ V++ G P+ + + + +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 229 KIYKGEYRCP 238
+ +G YR P
Sbjct: 262 AVDEG-YRLP 270
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 27/250 (10%)
Query: 7 DISREVNLFGK------YEVGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRG 57
D ++ V+ F K + K++G G F +V GR + SVAIK L+
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKV 83
Query: 58 GLTAHVKR----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGR 111
G T +R E SIM + HPNI++L V+ + V E+ + G L F + +
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 112 FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
F+ + + S ++Y G HRD +SDFGL+ V E P+
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED-DPE 202
Query: 172 GMLHTLCGTPA--YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYR 228
T G + +PE +A + + A D+WS G+VL+ V++ G P+ + + + +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 229 KIYKGEYRCP 238
+ +G YR P
Sbjct: 262 AVDEG-YRLP 270
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 14/215 (6%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G GA+ V + R+G+ VAIK +S+ RE+ ++ ++H N++ L +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 84 VLATKAKI------YFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
V + + Y VM F + KI FSE+ + Q++ ++Y HS GV
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTD--LQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
HRD I DFGL+ D + T Y APE++ +
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVILSWMHYNQ 221
Query: 198 KVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYK 232
VD+WS G ++ + G F + + +I K
Sbjct: 222 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 256
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 27/250 (10%)
Query: 7 DISREVNLFGK------YEVGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRG 57
D ++ V+ F K + K++G G F +V GR + SVAIK L+
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKV 83
Query: 58 GLTAHVKR----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGR 111
G T +R E SIM + HPNI++L V+ + V E + G L F + +
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ 143
Query: 112 FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
F+ + + S ++Y G HRD +SDFGLS V E P+
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPE 202
Query: 172 GMLHTLCGTPA--YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYR 228
T G + +PE +A + + A D+WS G+VL+ V++ G P+ + + + +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 229 KIYKGEYRCP 238
+ +G YR P
Sbjct: 262 AVDEG-YRLP 270
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 21/231 (9%)
Query: 20 VGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRGGLTAHVKR----EISIMSR 72
+ K++G G F +V GR + SVAIK L+ G T +R E SIM +
Sbjct: 20 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKVGYTEKQRRDFLGEASIMGQ 73
Query: 73 LRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEY 130
HPNI++L V+ + V E + G L F + +F+ + + S ++Y
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 131 CHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA--YVAPEI 188
G HRD +SDFGLS V E P+ T G + +PE
Sbjct: 134 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTSPEA 192
Query: 189 LAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+A + + A D+WS G+VL+ V++ G P+ + + + + + +G YR P
Sbjct: 193 IAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-YRLP 241
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 95/226 (42%), Gaps = 28/226 (12%)
Query: 6 GDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKR 65
G + R V KYE+ K +G GA+ V+ + RTG+ VA+K + R
Sbjct: 1 GRVDRHV--LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-DAFQNSTDAQRTFR 57
Query: 66 EISIMSRLR-HPNIVKLYEVLATKAK--IYFVMEFAKGGELFAKISKGRFSEQLSRRYF- 121
EI I++ L H NIV L VL +Y V ++ + +L A I + E + ++Y
Sbjct: 58 EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVI-RANILEPVHKQYVV 115
Query: 122 QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIR------------ 169
QLI ++Y HS G+ HRD ++DFGLS IR
Sbjct: 116 YQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINE 175
Query: 170 -------PDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
+L T Y APEIL +DMWS G +L
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCIL 221
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 112/250 (44%), Gaps = 27/250 (10%)
Query: 7 DISREVNLFGK------YEVGKIIGCGAFAKVYHGR---NVRTGQSVAIKAVSKQKILRG 57
D ++ V+ F K + K++G G F +V GR + SVAIK L+
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT------LKV 83
Query: 58 GLTAHVKR----EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGR 111
G T +R E SIM + HPNI++L V+ + V E+ + G L F + +
Sbjct: 84 GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ 143
Query: 112 FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
F+ + + S ++Y G HRD +SDFGL V E P+
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED-DPE 202
Query: 172 GMLHTLCGTPA--YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYR 228
T G + +PE +A + + A D+WS G+VL+ V++ G P+ + + + +
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERPYWEMSNQDVIK 261
Query: 229 KIYKGEYRCP 238
+ +G YR P
Sbjct: 262 AVDEG-YRLP 270
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 122/307 (39%), Gaps = 50/307 (16%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
N+ +++ ++G GA+ V + TG+ VAIK + + + REI I+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65
Query: 73 LRHPNIVKLYEVLATKA-----KIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
+H NI+ ++ + + ++Y + E + +L IS S+ + + Q + A
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD---------GMLHTLC 178
V+ H V HRD + DFGL+ + ++ D GM+
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE-FV 183
Query: 179 GTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--PNLMAMYRKI---- 230
T Y APE++ +D+WSCG +L L P D L+ ++ I
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 231 YKGEYRC-------------PKWTSPDL-KWF----------IGRLLDTDPATRITVDEI 266
+ RC P + + L K F + R+L DPA RIT E
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 267 LRDPWFK 273
L P+ +
Sbjct: 304 LEHPYLQ 310
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 51/293 (17%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRH 75
+E ++G GAF +V RN + AIK + +++K+ + + E+ +++ L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL------STILSEVXLLASLNH 61
Query: 76 PNIVKLY-------------EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSR--RY 120
+V+ Y + K+ ++ E+ + L+ I ++Q R
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 121 FQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS----------AVKEQIRP 170
F+Q++ A+ Y HS+G+ HR+ I DFGL+ + Q P
Sbjct: 122 FRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 171 DGM--LHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFND-PNLMAMY 227
L + GT YVA E+L G+ K+D +S G++ F PF+ + +
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXERVNIL 238
Query: 228 RKIYKGEYRCPKWTSPDL--------KWFIGRLLDTDPATRITVDEILRDPWF 272
+K+ P PD K I L+D DP R +L W
Sbjct: 239 KKLRSVSIEFP----PDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 117/301 (38%), Gaps = 51/301 (16%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY + T ++VAIK + + G+ RE+S++ L+H NI++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEH-EEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD--- 140
V+ +++ + E+A+ S ++ + + QLI+ V +CHSR HRD
Sbjct: 101 VIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKP 160
Query: 141 --XXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
I DFGL+ A IR H + T Y PEIL +
Sbjct: 161 QNLLLSVSDASETPVLKIGDFGLARAFGIPIR--QFTHEII-TLWYRPPEILLGSRHYST 217
Query: 198 KVDMWSCGVVL--FVLNAGYLPFNDPNLMAMYR----------KIYKGEYRCPKWTSP-- 243
VD+WS + ++ P D + +++ + G P W
Sbjct: 218 SVDIWSIACIWAEMLMKTPLFP-GDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFP 276
Query: 244 -----DLKWFIG------------RLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDF 286
LK +G +L+ DP RI+ L P+F H DF
Sbjct: 277 KFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS---------HNDF 327
Query: 287 D 287
D
Sbjct: 328 D 328
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVK-REISIMSRLRHPNIVKL 81
I+G GA A V+ GR+ +TG AIK + LR V+ RE ++ +L H NIVKL
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---PVDVQMREFEVLKKLNHKNIVKL 72
Query: 82 Y---EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSR 134
+ E T+ K+ +MEF G L+ + + + L F + ++ + +
Sbjct: 73 FAIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 135 GVFHRDXXXXXXXXXX----XXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILA 190
G+ HR+ ++DFG + ++ D L GT Y+ P++
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA---RELEDDEQFVXLYGTEEYLHPDMYE 188
Query: 191 K--------KGYDGAKVDMWSCGVVLFVLNAGYLPF 218
+ K Y GA VD+WS GV + G LPF
Sbjct: 189 RAVLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPF 223
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVK-REISIMSRLRHPNIVKL 81
I+G GA A V+ GR+ +TG AIK + LR V+ RE ++ +L H NIVKL
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---PVDVQMREFEVLKKLNHKNIVKL 72
Query: 82 Y---EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSR 134
+ E T+ K+ +MEF G L+ + + + L F + ++ + +
Sbjct: 73 FAIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 135 GVFHRDXXXXXXXXXX----XXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILA 190
G+ HR+ ++DFG + ++ D +L GT Y+ P++
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA---RELEDDEQFVSLYGTEEYLHPDMYE 188
Query: 191 K--------KGYDGAKVDMWSCGVVLFVLNAGYLPF 218
+ K Y GA VD+WS GV + G LPF
Sbjct: 189 RAVLRKDHQKKY-GATVDLWSIGVTFYHAATGSLPF 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 122/307 (39%), Gaps = 50/307 (16%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
N+ +++ ++G GA+ V + TG+ VAIK + + + REI I+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65
Query: 73 LRHPNIVKLYEVLATKA-----KIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
+H NI+ ++ + + ++Y + E + +L IS S+ + + Q + A
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD---------GMLHTLC 178
V+ H V HRD + DFGL+ + ++ D GM +
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV- 183
Query: 179 GTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--PNLMAMYRKI---- 230
T Y APE++ +D+WSCG +L L P D L+ ++ I
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 231 YKGEYRC-------------PKWTSPDL-KWF----------IGRLLDTDPATRITVDEI 266
+ RC P + + L K F + R+L DPA RIT E
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 267 LRDPWFK 273
L P+ +
Sbjct: 304 LEHPYLQ 310
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 39/284 (13%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G+F +V+ + +TG A+K V + ++ R E+ + L P IV LY
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRA-------EELMACAGLTSPRIVPLYG 133
Query: 84 VLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXX 142
+ + ME +GG L + +G E + Y Q + +EY HSR + H D
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 193
Query: 143 X-XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLC------GTPAYVAPEILAKKGYD 195
+ DFG + ++PDG+ L GT ++APE++ + D
Sbjct: 194 ADNVLLSSDGSHAALCDFGHAVC---LQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD 250
Query: 196 GAKVDMW-SCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE---YRCPKWTSPDLKWFIGR 251
AKVD+W SC ++L +LN G P+ + KI P +P I
Sbjct: 251 -AKVDVWSSCCMMLHMLN-GCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQE 308
Query: 252 LLDTDPATRITVDEI-------------LRDPWFKKDYKERKFP 282
L +P R++ E+ L+ PW + +YKE + P
Sbjct: 309 GLRKEPIHRVSAAELGGKVNRALQQVGGLKSPW-RGEYKEPRHP 351
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 16/205 (7%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKA--VSKQKILRGGLTAHVKREISIMSRL 73
+YE IG GA+ VY R+ +G VA+K+ V GGL RE++++ RL
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 74 ---RHPNIVKLYEVLAT-----KAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQ 123
HPN+V+L +V AT + K+ V E K + + +Q
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 128
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY 183
+ +++ H+ + HRD ++DFGL+ + L + T Y
Sbjct: 129 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALTPVVVTLWY 185
Query: 184 VAPEILAKKGYDGAKVDMWSCGVVL 208
APE+L + Y VDMWS G +
Sbjct: 186 RAPEVLLQSTY-ATPVDMWSVGCIF 209
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 120/306 (39%), Gaps = 48/306 (15%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
N+ +++ ++G GA+ V + TG+ VAIK + + + REI I+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65
Query: 73 LRHPNIVKLYEVLATKA-----KIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
+H NI+ ++ + + ++Y + E + +L IS S+ + + Q + A
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT--------LCG 179
V+ H V HRD + DFGL+ + ++ D T
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 180 TPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--PNLMAMYRKI----Y 231
T Y APE++ +D+WSCG +L L P D L+ ++ I
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 232 KGEYRC-------------PKWTSPDL-KWF----------IGRLLDTDPATRITVDEIL 267
+ RC P + + L K F + R+L DPA RIT E L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 268 RDPWFK 273
P+ +
Sbjct: 305 EHPYLQ 310
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 119/292 (40%), Gaps = 37/292 (12%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL 73
L KY+ + +G G + VY ++ + G+ VA+K + + G+ + REIS++ L
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRI-RLDAEDEGIPSTAIREISLLKEL 76
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFA-KGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
HPNIV L +V+ ++ + V EF K + +K + + Y QL+ V +CH
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD ++DFGL+ A +R H + T Y AP++L
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR--SYTHEVV-TLWYRAPDVLMG 193
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEYR-------CPKW 240
VD+WS G + + G F +D L ++ + R P W
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 241 TSPDLKWF-------------------IGRLLDTDPATRITVDEILRDPWFK 273
+ F + +L DP RI+ + + P+FK
Sbjct: 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 113/308 (36%), Gaps = 55/308 (17%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
+ +Y+ K IG GA V + G +VA+K +S+ RE+ ++
Sbjct: 21 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHAKRAYRELVLLKC 79
Query: 73 LRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLIS 126
+ H NI+ L V + +Y VME ++ + Q++
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLC 137
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+++ HS G+ HRD I DFGL+ + M+ T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---CTNFMMTPYVVTRYYRAP 194
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI---------------- 230
E++ GY A VD+WS G ++ L G + F + + + K+
Sbjct: 195 EVILGMGY-AANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ 253
Query: 231 ------------YKG---EYRCPKWTSP-----------DLKWFIGRLLDTDPATRITVD 264
Y G E P W P + + ++L DP RI+VD
Sbjct: 254 PTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVD 313
Query: 265 EILRDPWF 272
E LR P+
Sbjct: 314 EALRHPYI 321
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 119/292 (40%), Gaps = 37/292 (12%)
Query: 14 LFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL 73
L KY+ + +G G + VY ++ + G+ VA+K + + G+ + REIS++ L
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRI-RLDAEDEGIPSTAIREISLLKEL 76
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFA-KGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
HPNIV L +V+ ++ + V EF K + +K + + Y QL+ V +CH
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD ++DFGL+ A +R H + T Y AP++L
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR--SYTHEVV-TLWYRAPDVLMG 193
Query: 192 KGYDGAKVDMWSCGVVLFVLNAGYLPF----NDPNLMAMYRKIYKGEYR-------CPKW 240
VD+WS G + + G F +D L ++ + R P W
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253
Query: 241 TSPDLKWF-------------------IGRLLDTDPATRITVDEILRDPWFK 273
+ F + +L DP RI+ + + P+FK
Sbjct: 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 15/214 (7%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+G GA+ V + R Q VA+K +S+ Q ++ T RE+ ++ L+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT---YRELRLLKHLKHENVIGL 92
Query: 82 YEVLATKAKI-----YFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
+V I +++ G +L + S++ + QL+ ++Y HS G+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I DFGL+ + D + T Y APEI+ +
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI 230
VD+WS G ++ L G F + + ++I
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y + K IG G +KV+ N + Q AIK V+ ++ L ++ + EI+ +++L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQHS 115
Query: 78 --IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR-YFQQLISAVEYCHSR 134
I++LY+ T IY VME +L + + K + + R+ Y++ ++ AV H
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG---MLHTLCGTPAYVAPEILAK 191
G+ H D I DFG++ Q++PD + + GT Y+ PE +
Sbjct: 175 GIVHSDLKPANFLIVDGMLKLI-DFGIA---NQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 192 KGYD----------GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY-----KGEYR 236
K D+WS G +L+ + G PF ++ K++ E
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIE 288
Query: 237 CPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
P DL+ + L DP RI++ E+L P+ +
Sbjct: 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 101
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K +++ G +L+ + S + Q++ ++Y H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 162 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 218
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 219 MLNSKGYTKS-IDIWSVGCIL 238
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 120/282 (42%), Gaps = 39/282 (13%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G+F +V+ + +TG A+K V + ++ R E+ + L P IV LY
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRA-------EELMACAGLTSPRIVPLYG 152
Query: 84 VLATKAKIYFVMEFAKGGELFAKI-SKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXX 142
+ + ME +GG L + +G E + Y Q + +EY HSR + H D
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 212
Query: 143 X-XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLC------GTPAYVAPEILAKKGYD 195
+ DFG + ++PDG+ +L GT ++APE++ + D
Sbjct: 213 ADNVLLSSDGSHAALCDFGHAVC---LQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 196 GAKVDMW-SCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGE---YRCPKWTSPDLKWFIGR 251
AKVD+W SC ++L +LN G P+ + KI P +P I
Sbjct: 270 -AKVDVWSSCCMMLHMLN-GCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQE 327
Query: 252 LLDTDPATRITVDEI-------------LRDPWFKKDYKERK 280
L +P R++ E+ L+ PW + +YKE +
Sbjct: 328 GLRKEPIHRVSAAELGGKVNRALQQVGGLKSPW-RGEYKEPR 368
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 15/230 (6%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKR----EISIMSRLR 74
++ ++IG G F +V G G+ A+ K L+ G T +R E SIM +
Sbjct: 36 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAI---KTLKSGYTEKQRRDFLSEASIMGQFD 92
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCH 132
HPN++ L V+ + + EF + G L F + + G+F+ + + + ++Y
Sbjct: 93 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 152
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEIL 189
HRD +SDFGLS E D + G + APE +
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 190 AKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+ + A D+WS G+V++ V++ G P+ D + I + +YR P
Sbjct: 213 QYRKFTSAS-DVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-DYRLP 260
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y + K IG G +KV+ N + Q AIK V+ ++ L ++ + EI+ +++L+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQHS 87
Query: 78 --IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR-YFQQLISAVEYCHSR 134
I++LY+ T IY VME +L + + K + + R+ Y++ ++ AV H
Sbjct: 88 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG---MLHTLCGTPAYVAPEILAK 191
G+ H D I DFG++ Q++PD + + GT Y+ PE +
Sbjct: 147 GIVHSDLKPANFLIVDGMLKLI-DFGIA---NQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 192 KGYD----------GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY-----KGEYR 236
K D+WS G +L+ + G PF ++ K++ E
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIE 260
Query: 237 CPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
P DL+ + L DP RI++ E+L P+ +
Sbjct: 261 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y + K IG G +KV+ N + Q AIK V+ ++ L ++ + EI+ +++L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQHS 115
Query: 78 --IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR-YFQQLISAVEYCHSR 134
I++LY+ T IY VME +L + + K + + R+ Y++ ++ AV H
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG---MLHTLCGTPAYVAPEILAK 191
G+ H D I DFG++ Q++PD + + GT Y+ PE +
Sbjct: 175 GIVHSDLKPANFLIVDGMLKLI-DFGIA---NQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 192 KGYD----------GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY-----KGEYR 236
K D+WS G +L+ + G PF ++ K++ E
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIE 288
Query: 237 CPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
P DL+ + L DP RI++ E+L P+ +
Sbjct: 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 30/277 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y + K IG G +KV+ N + Q AIK V+ ++ L ++ + EI+ +++L+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQHS 87
Query: 78 --IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR-YFQQLISAVEYCHSR 134
I++LY+ T IY VME +L + + K + + R+ Y++ ++ AV H
Sbjct: 88 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGML---HTLCGTPAYVAPEILAK 191
G+ H D I DFG++ Q++PD + GT Y+ PE +
Sbjct: 147 GIVHSDLKPANFLIVDGMLKLI-DFGIA---NQMQPDXXXVVKDSQVGTVNYMPPEAIKD 202
Query: 192 KGYD----------GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY-----KGEYR 236
K D+WS G +L+ + G PF ++ K++ E
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIE 260
Query: 237 CPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
P DL+ + L DP RI++ E+L P+ +
Sbjct: 261 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y + K IG G +KV+ N + Q AIK V+ ++ L ++ + EI+ +++L+ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQHS 68
Query: 78 --IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR-YFQQLISAVEYCHSR 134
I++LY+ T IY VME +L + + K + + R+ Y++ ++ AV H
Sbjct: 69 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG---MLHTLCGTPAYVAPEILAK 191
G+ H D I DFG++ Q++PD + + GT Y+ PE +
Sbjct: 128 GIVHSDLKPANFLIVDGMLKLI-DFGIA---NQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 192 KGYD----------GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY-----KGEYR 236
K D+WS G +L+ + G PF ++ K++ E
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIE 241
Query: 237 CPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
P DL+ + L DP RI++ E+L P+ +
Sbjct: 242 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
F + E+G++IG G F +VYHG R VAI+ + ++ L A KRE+ + R
Sbjct: 32 FEQLEIGELIGKGRFGQVYHG---RWHGEVAIRLIDIERDNEDQLKA-FKREVMAYRQTR 87
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQL--SRRYFQQLISAVEYCH 132
H N+V + + + KG L++ + + + +R+ Q+++ + Y H
Sbjct: 88 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGL---SAVKEQIRPDGMLHTLCGTPAYVAPEIL 189
++G+ H+D I+DFGL S V + R + L G ++APEI+
Sbjct: 148 AKGILHKD-LKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 206
Query: 190 AKKGYD--------GAKVDMWSCGVVLFVLNAGYLPF 218
+ D D+++ G + + L+A PF
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 49/298 (16%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTG-QSVAIKAVSKQKILRGGLTAHVKREISIMSRLR- 74
+YE IG GA+ KV+ R+++ G + VA+K V Q G+ RE++++ L
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLET 70
Query: 75 --HPNIVKLYEVLAT-----KAKIYFVMEFAKGGELFAKISK----GRFSEQLSRRYFQQ 123
HPN+V+L++V + K+ V E +L + K G +E + FQ
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQ- 128
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY 183
L+ +++ HS V HRD ++DFGL+ + L ++ T Y
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWY 185
Query: 184 VAPEILAKKGYDGAKVDMWSCGVV---------LF-----------VLNAGYLPFND--P 221
APE+L + Y VD+WS G + LF +L+ LP + P
Sbjct: 186 RAPEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 222 NLMAMYRKIYKGEYRCP--KWTSPDL----KWFIGRLLDTDPATRITVDEILRDPWFK 273
+A+ R+ + + P K+ + D+ K + + L +PA RI+ L P+F+
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVT-DIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y + K IG G +KV+ N + Q AIK V+ ++ L ++ + EI+ +++L+ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQHS 71
Query: 78 --IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR-YFQQLISAVEYCHSR 134
I++LY+ T IY VME +L + + K + + R+ Y++ ++ AV H
Sbjct: 72 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG---MLHTLCGTPAYVAPEILAK 191
G+ H D I DFG++ Q++PD + + GT Y+ PE +
Sbjct: 131 GIVHSDLKPANFLIVDGMLKLI-DFGIA---NQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 192 KGYD----------GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY-----KGEYR 236
K D+WS G +L+ + G PF ++ K++ E
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIE 244
Query: 237 CPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
P DL+ + L DP RI++ E+L P+ +
Sbjct: 245 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 15/214 (7%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+G GA+ V + R Q VA+K +S+ Q ++ T RE+ ++ L+H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT---YRELRLLKHLKHENVIGL 92
Query: 82 YEVLATKAKI-----YFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
+V I +++ G +L + S++ + QL+ ++Y HS G+
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I DFGL+ + D + T Y APEI+ +
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI 230
VD+WS G ++ L G F + + ++I
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 112/308 (36%), Gaps = 55/308 (17%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
+ +Y+ K IG GA V + G +VA+K +S+ RE+ ++
Sbjct: 19 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHAKRAYRELVLLKC 77
Query: 73 LRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLIS 126
+ H NI+ L V + +Y VME ++ + Q++
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSYLLYQMLC 135
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+++ HS G+ HRD I DFGL+ + M+ T Y AP
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST---NFMMTPYVVTRYYRAP 192
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI---------------- 230
E++ GY VD+WS G ++ L G + F + + + K+
Sbjct: 193 EVILGMGYK-ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ 251
Query: 231 ------------YKG---EYRCPKWTSP-----------DLKWFIGRLLDTDPATRITVD 264
Y G E P W P + + ++L DP RI+VD
Sbjct: 252 PTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVD 311
Query: 265 EILRDPWF 272
E LR P+
Sbjct: 312 EALRHPYI 319
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y + K IG G +KV+ N + Q AIK V+ ++ L ++ + EI+ +++L+ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQHS 67
Query: 78 --IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR-YFQQLISAVEYCHSR 134
I++LY+ T IY VME +L + + K + + R+ Y++ ++ AV H
Sbjct: 68 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG---MLHTLCGTPAYVAPEILAK 191
G+ H D I DFG++ Q++PD + + GT Y+ PE +
Sbjct: 127 GIVHSDLKPANFLIVDGMLKLI-DFGIA---NQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 192 KGYD----------GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY-----KGEYR 236
K D+WS G +L+ + G PF ++ K++ E
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIE 240
Query: 237 CPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
P DL+ + L DP RI++ E+L P+ +
Sbjct: 241 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 15/214 (7%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+G GA+ V + R Q VA+K +S+ Q ++ T RE+ ++ L+H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT---YRELRLLKHLKHENVIGL 84
Query: 82 YEVLATKAKI-----YFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
+V I +++ G +L + S++ + QL+ ++Y HS G+
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 144
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I DFGL+ + D + T Y APEI+ +
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI 230
VD+WS G ++ L G F + + ++I
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 233
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V +V++G +A+K +S+ Q I+ T RE+ ++ ++
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 108
Query: 75 HPNIVKLYEVLATKAKI-----YFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVE 129
H N++ L +V + +++ G +L + + ++ + Q++ ++
Sbjct: 109 HENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 168
Query: 130 YCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEIL 189
Y HS + HRD I DFGL+ D + T Y APEI+
Sbjct: 169 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIM 223
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAG 214
+ VD+WS G ++ L G
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 49/298 (16%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTG-QSVAIKAVSKQKILRGGLTAHVKREISIMSRLR- 74
+YE IG GA+ KV+ R+++ G + VA+K V Q G+ RE++++ L
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLET 70
Query: 75 --HPNIVKLYEVLAT-----KAKIYFVMEFAKGGELFAKISK----GRFSEQLSRRYFQQ 123
HPN+V+L++V + K+ V E +L + K G +E + FQ
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQ- 128
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY 183
L+ +++ HS V HRD ++DFGL+ + L ++ T Y
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWY 185
Query: 184 VAPEILAKKGYDGAKVDMWSCGVV---------LF-----------VLNAGYLPFND--P 221
APE+L + Y VD+WS G + LF +L+ LP + P
Sbjct: 186 RAPEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 222 NLMAMYRKIYKGEYRCP--KWTSPDL----KWFIGRLLDTDPATRITVDEILRDPWFK 273
+A+ R+ + + P K+ + D+ K + + L +PA RI+ L P+F+
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVT-DIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 20/218 (9%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
+L +Y K +GCG V+ + + VAIK + + H REI I+ R
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---LTDPQSVKHALREIKIIRR 64
Query: 73 LRHPNIVKLYEVLATKA--------------KIYFVMEFAKGGELFAKISKGRFSEQLSR 118
L H NIVK++E+L +Y V E+ + +L + +G E+ +R
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHAR 123
Query: 119 RYFQQLISAVEYCHSRGVFHRDXXXXXX-XXXXXXXXXISDFGLSAVKE-QIRPDGMLHT 176
+ QL+ ++Y HS V HRD I DFGL+ + + G L
Sbjct: 124 LFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 177 LCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAG 214
T Y +P +L +DMW+ G + + G
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 49/298 (16%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTG-QSVAIKAVSKQKILRGGLTAHVKREISIMSRLR- 74
+YE IG GA+ KV+ R+++ G + VA+K V Q G+ RE++++ L
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLRHLET 70
Query: 75 --HPNIVKLYEVLAT-----KAKIYFVMEFAKGGELFAKISK----GRFSEQLSRRYFQQ 123
HPN+V+L++V + K+ V E +L + K G +E + FQ
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQ- 128
Query: 124 LISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY 183
L+ +++ HS V HRD ++DFGL+ + L ++ T Y
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLWY 185
Query: 184 VAPEILAKKGYDGAKVDMWSCGVV---------LF-----------VLNAGYLPFND--P 221
APE+L + Y VD+WS G + LF +L+ LP + P
Sbjct: 186 RAPEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244
Query: 222 NLMAMYRKIYKGEYRCP--KWTSPDL----KWFIGRLLDTDPATRITVDEILRDPWFK 273
+A+ R+ + + P K+ + D+ K + + L +PA RI+ L P+F+
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVT-DIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G+F +V+ ++ +TG A+K V + ++ R E+ + L P IV LY
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFR-------VEELVACAGLSSPRIVPLYG 117
Query: 84 VLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXX 142
+ + ME +GG L I + G E + Y Q + +EY H+R + H D
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 143 X-XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLC------GTPAYVAPEILAKKGYD 195
+ DFG + ++PDG+ +L GT ++APE++ K D
Sbjct: 178 ADNVLLSSDGSRAALCDFGHALC---LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 196 GAKVDMW-SCGVVLFVLNAGY 215
AKVD+W SC ++L +LN +
Sbjct: 235 -AKVDIWSSCCMMLHMLNGCH 254
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 75
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 76 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCAKLTDDHVQFLIYQILRG 133
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 188
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 75
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 76 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPE 188
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 93
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYRAP 210
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 211 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 270
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 271 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 324
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 325 FDELRDPNVK 334
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 108
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYRAP 225
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 286 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 340 FDELRDPNVK 349
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 82
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYRAP 199
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 200 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 259
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 260 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 313
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 314 FDELRDPNVK 323
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G+F +V+ ++ +TG A+K V + ++ R E+ + L P IV LY
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFR-------VEELVACAGLSSPRIVPLYG 133
Query: 84 VLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXX 142
+ + ME +GG L I + G E + Y Q + +EY H+R + H D
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 143 X-XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLC------GTPAYVAPEILAKKGYD 195
+ DFG + ++PDG+ +L GT ++APE++ K D
Sbjct: 194 ADNVLLSSDGSRAALCDFGHALC---LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 196 GAKVDMW-SCGVVLFVLNAGY 215
AKVD+W SC ++L +LN +
Sbjct: 251 -AKVDIWSSCCMMLHMLNGCH 270
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 86
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYRAP 203
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 263
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 264 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 318 FDELRDPNVK 327
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 86
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYRAP 203
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 263
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 264 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 318 FDELRDPNVK 327
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 32/231 (13%)
Query: 6 GDISREVNLFGKYEVGKII-------------GCGAFAKVYHGRNVRTGQSVAIKAVSK- 51
G +S+E F + E+ K I G GA+ V + +TG VA+K +SK
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKP 70
Query: 52 -QKILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAK-------IYFVMEFAKGGEL 103
Q I+ T RE+ ++ ++H N++ L +V T A+ +Y V G +L
Sbjct: 71 FQSIIHAKRTY---RELRLLKHMKHENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADL 125
Query: 104 FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSA 163
+ + ++ + Q++ ++Y HS + HRD I DFGL+
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
Query: 164 VKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAG 214
D + T Y APEI+ + VD+WS G ++ L G
Sbjct: 186 -----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK K+L+G A RE+ IM +L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQG--KAFKNRELQIMRKLDHCN 74
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYRAP 191
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAG 214
E++ + +D+WS G VL L G
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 74
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYRAP 191
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAG 214
E++ + +D+WS G VL L G
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 74
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYRAP 191
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAG 214
E++ + +D+WS G VL L G
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 119/296 (40%), Gaps = 53/296 (17%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F V+ + V + + VAIK V + K + RE+ IM ++HPN
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKN-------RELQIMRIVKHPN 93
Query: 78 IVKLYEVLATKAK------IYFVMEFA-----KGGELFAKISKGRFSEQLSRRYFQQLIS 126
+V L + + V+E+ + +AK+ K L + Y QL+
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKL-KQTMPMLLIKLYMYQLLR 152
Query: 127 AVEYCHSRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
++ Y HS G+ HRD + DFG + + P+ + +C Y A
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN--VSXICSR-YYRA 209
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYK------------- 232
PE++ +D+WS G V+ L G F + + +I K
Sbjct: 210 PELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269
Query: 233 ----GEYRCPKW------------TSPDLKWFIGRLLDTDPATRITVDEILRDPWF 272
E++ P+ T PD I RLL+ P+ R+T E L P+F
Sbjct: 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 32/231 (13%)
Query: 6 GDISREVNLFGKYEVGKII-------------GCGAFAKVYHGRNVRTGQSVAIKAVSK- 51
G +S+E F + E+ K I G GA+ V + +TG VA+K +S+
Sbjct: 1 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 60
Query: 52 -QKILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAK-------IYFVMEFAKGGEL 103
Q I+ T RE+ ++ ++H N++ L +V T A+ +Y V G +L
Sbjct: 61 FQSIIHAKRTY---RELRLLKHMKHENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADL 115
Query: 104 FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSA 163
+ + ++ + Q++ ++Y HS + HRD I DFGL+
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR 175
Query: 164 VKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAG 214
D + T Y APEI+ + VD+WS G ++ L G
Sbjct: 176 -----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G+F +V+ ++ +TG A+K V + ++ R E+ + L P IV LY
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFR-------VEELVACAGLSSPRIVPLYG 131
Query: 84 VLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXX 142
+ + ME +GG L I + G E + Y Q + +EY H+R + H D
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 143 X-XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLC------GTPAYVAPEILAKKGYD 195
+ DFG + ++PDG+ +L GT ++APE++ K D
Sbjct: 192 ADNVLLSSDGSRAALCDFGHALC---LQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 196 GAKVDMW-SCGVVLFVLNA 213
AKVD+W SC ++L +LN
Sbjct: 249 -AKVDIWSSCCMMLHMLNG 266
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 75
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYRAP 192
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAG 214
E++ + +D+WS G VL L G
Sbjct: 193 ELIFGATDYTSSIDVWSAGCVLAELLLG 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 78
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYRAP 195
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 196 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 255
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 256 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 309
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 310 FDELRDPNVK 319
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ IG GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 84
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 85 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 197
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 118/305 (38%), Gaps = 44/305 (14%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y + IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFE--HQTYCQRTLREIQILLRFRHE 101
Query: 77 NIVKLYEVLATKA-----KIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYC 131
N++ + ++L +Y V + + +L+ + + S + Q++ ++Y
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKSQQLSNDHICYFLYQILRGLKYI 160
Query: 132 HSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKE-QIRPDGMLHTLCGTPAYVAPEI-L 189
HS V HRD I DFGL+ + + + G L T Y APEI L
Sbjct: 161 HSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY-------KGEYRC----- 237
KGY + +D+WS G +L + + F + + I + + C
Sbjct: 221 NSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMK 279
Query: 238 --------------------PKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYK 277
PK S L + R+L +P RITV+E L P+ ++ Y
Sbjct: 280 ARNYLQSLPSKTKVAWAKLFPKSDSKALD-LLDRMLTFNPNKRITVEEALAHPYLEQYYD 338
Query: 278 ERKFP 282
P
Sbjct: 339 PTDEP 343
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK K+L+G A RE+ IM +L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQG--KAFKNRELQIMRKLDHCN 74
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYRAP 191
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAG 214
E++ + +D+WS G VL L G
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKSQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 87
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 148 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYRAP 204
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 264
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 265 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 318
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 319 FDELRDPNVK 328
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 75
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 76 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 188
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYXQRTLREIKILLRFRHE 85
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 202
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 203 MLNSKGYTKS-IDIWSVGCIL 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 85
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 202
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 203 MLNSKGYTKS-IDIWSVGCIL 222
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 99
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 100 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGXVATRWYRAPE 212
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 89
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 90 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 148 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 202
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK K+L+G A RE+ IM +L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQG--KAFKNRELQIMRKLDHCN 74
Query: 78 IVKL----YEVLATKAKIY--FVMEFAKGGELFAKISKGRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y V+++ R + L + Y QL +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYRAP 191
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAG 214
E++ + +D+WS G VL L G
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 108
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYRAP 225
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 286 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 340 FDELRDPNVK 349
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 74
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYRAP 191
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAG 214
E++ + +D+WS G VL L G
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 85
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 86 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 198
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 30/277 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y + K IG G +KV+ N + Q AIK V+ ++ L ++ + EI+ +++L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQQHS 115
Query: 78 --IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR-YFQQLISAVEYCHSR 134
I++LY+ T IY VME +L + + K + + R+ Y++ ++ AV H
Sbjct: 116 DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG---MLHTLCGTPAYVAPEILAK 191
G+ H D I DFG++ Q++PD + + G Y+ PE +
Sbjct: 175 GIVHSDLKPANFLIVDGMLKLI-DFGIA---NQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 192 KGYD----------GAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY-----KGEYR 236
K D+WS G +L+ + G PF ++ K++ E
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIE 288
Query: 237 CPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFK 273
P DL+ + L DP RI++ E+L P+ +
Sbjct: 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 18/263 (6%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+F VY G + T VA + +K+ + K E + L+HPNIV+ Y+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSE-RQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 84 VLATKAK----IYFVMEFAKGGELFAKISKGRFSE-QLSRRYFQQLISAVEYCHSRG--V 136
+ K I V E G L + + + + ++ R + +Q++ +++ H+R +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 137 FHRDXXXXXXXXX-XXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
HRD I D GL+ +K + GTP + APE +K YD
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRA----SFAKAVIGTPEFXAPEXYEEK-YD 207
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFND-PNLMAMYRKIYKGEYRCP--KWTSPDLKWFIGRL 252
+ VD+++ G P+++ N +YR++ G K P++K I
Sbjct: 208 ES-VDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGC 266
Query: 253 LDTDPATRITVDEILRDPWFKKD 275
+ + R ++ ++L +F+++
Sbjct: 267 IRQNKDERYSIKDLLNHAFFQEE 289
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 2 GDNTGDISREVNLFGKYEVGKII-------------GCGAFAKVYHGRNVRTGQSVAIKA 48
G + ++S+E F + E+ K I G GA+ V + +TG VA+K
Sbjct: 1 GSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 60
Query: 49 VSK--QKILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAK-------IYFVMEFAK 99
+S+ Q I+ T RE+ ++ ++H N++ L +V T A+ +Y V
Sbjct: 61 LSRPFQSIIHAKRTY---RELRLLKHMKHENVIGLLDVF-TPARSLEEFNDVYLVTHLM- 115
Query: 100 GGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDF 159
G +L + + ++ + Q++ ++Y HS + HRD I DF
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDF 175
Query: 160 GLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAG 214
GL+ D + T Y APEI+ + VD+WS G ++ L G
Sbjct: 176 GLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 98
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 99 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 211
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 110
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYRAP 227
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 287
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 288 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 341
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 342 FDELRDPNVK 351
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 81
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 198
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 199 MLNSKGYTKS-IDIWSVGCIL 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 32/231 (13%)
Query: 6 GDISREVNLFGKYEVGKII-------------GCGAFAKVYHGRNVRTGQSVAIKAVSK- 51
G +S+E F + E+ K I G GA+ V + +TG VA+K +S+
Sbjct: 1 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 60
Query: 52 -QKILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAK-------IYFVMEFAKGGEL 103
Q I+ T RE+ ++ ++H N++ L +V T A+ +Y V G +L
Sbjct: 61 FQSIIHAKRTY---RELRLLKHMKHENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADL 115
Query: 104 FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSA 163
+ + ++ + Q++ ++Y HS + HRD I DFGL+
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
Query: 164 VKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAG 214
D + T Y APEI+ + VD+WS G ++ L G
Sbjct: 176 -----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 21 GKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQ-KILRGGLTAHVKREISIMSRLRHPNIV 79
G +G G F VY G T +VA+K ++ I L +EI +M++ +H N+V
Sbjct: 36 GNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 80 KLYEVLATKAKIYFVMEFAKGGELFAKIS----KGRFSEQLSRRYFQQLISAVEYCHSRG 135
+L + + V + G L ++S S + + Q + + + H
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
HRD ISDFGL+ E+ M + GT AY+APE L +G
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL--RGEI 211
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFND 220
K D++S GVVL + G LP D
Sbjct: 212 TPKSDIYSFGVVLLEIITG-LPAVD 235
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 102
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYRAP 219
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 279
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 280 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 333
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 334 FDELRDPNVK 343
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 81
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 198
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 199 MLNSKGYTKS-IDIWSVGCIL 218
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 99
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 100 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 212
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 79
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYRAP 196
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 256
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 257 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 310
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 311 FDELRDPNVK 320
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 81
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 198
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 199 MLNSKGYTKS-IDIWSVGCIL 218
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 85
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLXEXVATRWYRAPEI 202
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 203 MLNSKGYTKS-IDIWSVGCIL 222
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 21 GKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQ-KILRGGLTAHVKREISIMSRLRHPNIV 79
G +G G F VY G T +VA+K ++ I L +EI +M++ +H N+V
Sbjct: 36 GNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 80 KLYEVLATKAKIYFVMEFAKGGELFAKIS----KGRFSEQLSRRYFQQLISAVEYCHSRG 135
+L + + V + G L ++S S + + Q + + + H
Sbjct: 94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
HRD ISDFGL+ E+ M + GT AY+APE L +G
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL--RGEI 211
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFND 220
K D++S GVVL + G LP D
Sbjct: 212 TPKSDIYSFGVVLLEIITG-LPAVD 235
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 86
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLXEXVATRWYRAPEI 203
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 204 MLNSKGYTKS-IDIWSVGCIL 223
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 112
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYRAP 229
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 289
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 290 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 343
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 344 FDELRDPNVK 353
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 86
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 203
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 204 MLNSKGYTKS-IDIWSVGCIL 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 87
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 147
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 148 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 204
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 205 MLNSKGYTKS-IDIWSVGCIL 224
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 78
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 138
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 139 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 195
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 196 MLNSKGYTKS-IDIWSVGCIL 215
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 85
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 202
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 203 MLNSKGYTKS-IDIWSVGCIL 222
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 79
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 196
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 197 MLNSKGYTKS-IDIWSVGCIL 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 84
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 85 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 197
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 89
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 149
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 150 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 206
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 207 MLNSKGYTKS-IDIWSVGCIL 226
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 81
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 198
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 199 MLNSKGYTKS-IDIWSVGCIL 218
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 79
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 196
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 197 MLNSKGYTKS-IDIWSVGCIL 216
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 32/231 (13%)
Query: 6 GDISREVNLFGKYEVGKII-------------GCGAFAKVYHGRNVRTGQSVAIKAVSK- 51
G +S+E F + E+ K I G GA+ V + +TG VA+K +S+
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 70
Query: 52 -QKILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAK-------IYFVMEFAKGGEL 103
Q I+ T RE+ ++ ++H N++ L +V T A+ +Y V G +L
Sbjct: 71 FQSIIHAKRTY---RELRLLKHMKHENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADL 125
Query: 104 FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSA 163
+ + ++ + Q++ ++Y HS + HRD I DFGL+
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
Query: 164 VKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAG 214
D + T Y APEI+ + VD+WS G ++ L G
Sbjct: 186 -----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 32/231 (13%)
Query: 6 GDISREVNLFGKYEVGKII-------------GCGAFAKVYHGRNVRTGQSVAIKAVSK- 51
G +S+E F + E+ K I G GA+ V + +TG VA+K +S+
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 70
Query: 52 -QKILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAK-------IYFVMEFAKGGEL 103
Q I+ T RE+ ++ ++H N++ L +V T A+ +Y V G +L
Sbjct: 71 FQSIIHAKRTY---RELRLLKHMKHENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADL 125
Query: 104 FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSA 163
+ + ++ + Q++ ++Y HS + HRD I DFGL+
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
Query: 164 VKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAG 214
D + T Y APEI+ + VD+WS G ++ L G
Sbjct: 186 -----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 21 GKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQ-KILRGGLTAHVKREISIMSRLRHPNIV 79
G +G G F VY G T +VA+K ++ I L +EI +M++ +H N+V
Sbjct: 30 GNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 87
Query: 80 KLYEVLATKAKIYFVMEFAKGGELFAKIS----KGRFSEQLSRRYFQQLISAVEYCHSRG 135
+L + + V + G L ++S S + + Q + + + H
Sbjct: 88 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 147
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
HRD ISDFGL+ E+ M + GT AY+APE L +G
Sbjct: 148 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL--RGEI 205
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFND 220
K D++S GVVL + G LP D
Sbjct: 206 TPKSDIYSFGVVLLEIITG-LPAVD 229
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 90
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 91 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 203
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 21/268 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+++G G F +V+ + TG+ A K ++K+++ + E I++++ IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKI-----SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
TK + VM GG++ I F E + Y Q++S +E+ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKE--QIRPDGMLHTLCGTPAYVAPEILAKKGY 194
+RD ISD GL+ + Q + G GTP ++APE+L + Y
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY----AGTPGFMAPELLLGEEY 366
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCPKWTSPDLKWFIG 250
D + VD ++ GV L+ + A PF + +++ + P SP K F
Sbjct: 367 DFS-VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 251 RLLDTDPATRI-----TVDEILRDPWFK 273
LL DP R+ + D + P F+
Sbjct: 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 16/240 (6%)
Query: 9 SREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKR--- 65
S+E+++ ++ ++IG G F +V G G+ A+ K L+ G T +R
Sbjct: 1 SKEIDI-SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAI---KTLKSGYTEKQRRDFL 56
Query: 66 -EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQ 122
E SIM + HPN++ L V+ + + EF + G L F + + G+F+ +
Sbjct: 57 SEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR 116
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
+ + ++Y HR +SDFGLS E D + G
Sbjct: 117 GIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 176
Query: 183 ---YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+ APE + + + A D+WS G+V++ V++ G P+ D + I + +YR P
Sbjct: 177 PIRWTAPEAIQYRKFTSAS-DVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-DYRLP 234
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 21/268 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+++G G F +V+ + TG+ A K ++K+++ + E I++++ IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKI-----SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
TK + VM GG++ I F E + Y Q++S +E+ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKE--QIRPDGMLHTLCGTPAYVAPEILAKKGY 194
+RD ISD GL+ + Q + G GTP ++APE+L + Y
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY----AGTPGFMAPELLLGEEY 366
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCPKWTSPDLKWFIG 250
D + VD ++ GV L+ + A PF + +++ + P SP K F
Sbjct: 367 DFS-VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 251 RLLDTDPATRI-----TVDEILRDPWFK 273
LL DP R+ + D + P F+
Sbjct: 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 120/310 (38%), Gaps = 70/310 (22%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 153
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K ++Y + E ++++ R + L + Y QL +
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSYICSR-YYRAP 270
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVL----------------------------------N 212
E++ + +D+WS G VL L N
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 330
Query: 213 AGYLPFNDPNLMAM-YRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEI----- 266
Y F P + A + K+++ T P+ RLL+ P R+T E
Sbjct: 331 PNYTEFKFPQIKAHPWTKVFRPR------TPPEAIALCSRLLEYTPTARLTPLEACAHSF 384
Query: 267 ---LRDPWFK 273
LRDP K
Sbjct: 385 FDELRDPNVK 394
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 2 GDNTGDISREVNLFGKYEVGKII-------------GCGAFAKVYHGRNVRTGQSVAIKA 48
G + ++S+E F + E+ K I G GA+ V + +TG VA+K
Sbjct: 1 GSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 60
Query: 49 VSK--QKILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAK-------IYFVMEFAK 99
+S+ Q I+ T RE+ ++ ++H N++ L +V T A+ +Y V
Sbjct: 61 LSRPFQSIIHAKRTY---RELRLLKHMKHENVIGLLDVF-TPARSLEEFNDVYLVTHLM- 115
Query: 100 GGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDF 159
G +L + + ++ + Q++ ++Y HS + HRD I DF
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 175
Query: 160 GLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAG 214
GL+ D + T Y APEI+ + VD+WS G ++ L G
Sbjct: 176 GLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 21/268 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+++G G F +V+ + TG+ A K ++K+++ + E I++++ IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKI-----SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
TK + VM GG++ I F E + Y Q++S +E+ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKE--QIRPDGMLHTLCGTPAYVAPEILAKKGY 194
+RD ISD GL+ + Q + G GTP ++APE+L + Y
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY----AGTPGFMAPELLLGEEY 366
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCPKWTSPDLKWFIG 250
D + VD ++ GV L+ + A PF + +++ + P SP K F
Sbjct: 367 DFS-VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 251 RLLDTDPATRI-----TVDEILRDPWFK 273
LL DP R+ + D + P F+
Sbjct: 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 81
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 198
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 199 MLNSKGYTKS-IDIWSVGCIL 218
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 21/268 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+++G G F +V+ + TG+ A K ++K+++ + E I++++ IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKI-----SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
TK + VM GG++ I F E + Y Q++S +E+ H R +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKE--QIRPDGMLHTLCGTPAYVAPEILAKKGY 194
+RD ISD GL+ + Q + G GTP ++APE+L + Y
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY----AGTPGFMAPELLLGEEY 366
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPFNDPNLMA----MYRKIYKGEYRCPKWTSPDLKWFIG 250
D + VD ++ GV L+ + A PF + +++ + P SP K F
Sbjct: 367 DFS-VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 251 RLLDTDPATRI-----TVDEILRDPWFK 273
LL DP R+ + D + P F+
Sbjct: 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFR 453
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 84
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 85 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 197
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 78
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 79 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 136
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 191
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 32/231 (13%)
Query: 6 GDISREVNLFGKYEVGKII-------------GCGAFAKVYHGRNVRTGQSVAIKAVSK- 51
G +S+E F + E+ K I G GA+ V + +TG VA+K +S+
Sbjct: 1 GPMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 60
Query: 52 -QKILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAK-------IYFVMEFAKGGEL 103
Q I+ T RE+ ++ ++H N++ L +V T A+ +Y V G +L
Sbjct: 61 FQSIIHAKRTY---RELRLLKHMKHENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADL 115
Query: 104 FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSA 163
+ + ++ + Q++ ++Y HS + HRD I DFGL+
Sbjct: 116 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
Query: 164 VKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAG 214
D + T Y APEI+ + VD+WS G ++ L G
Sbjct: 176 -----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 102
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 103 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGYVATRWYRAPE 215
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 83
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 200
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 201 MLNSKGYTKS-IDIWSVGCIL 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 108/267 (40%), Gaps = 36/267 (13%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
++IG G F +V+ ++ G++ IK V +RE+ +++L H NIV
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-------NEKAEREVKALAKLDHVNIVHY 69
Query: 82 ---------------YEVLATKAKIYFV-MEFAKGGELFAKISKGR---FSEQLSRRYFQ 122
+K K F+ MEF G L I K R + L+ F+
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
Q+ V+Y HS+ + +RD I DFGL ++ DG GT
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT---SLKNDGKRXRSKGTLR 186
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWT 241
Y++PE ++ + Y G +VD+++ G++L +L+ F R + K
Sbjct: 187 YMSPEQISSQDY-GKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKE- 244
Query: 242 SPDLKWFIGRLLDTDPATRITVDEILR 268
K + +LL P R EILR
Sbjct: 245 ----KTLLQKLLSKKPEDRPNTSEILR 267
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 86
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 87 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 199
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 2 GDNTGDISREVNLFGKYEVGKII-------------GCGAFAKVYHGRNVRTGQSVAIKA 48
G + ++S+E F + E+ K I G GA+ V + +TG VA+K
Sbjct: 18 GSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 77
Query: 49 VSK--QKILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAK-------IYFVMEFAK 99
+S+ Q I+ T RE+ ++ ++H N++ L +V T A+ +Y V
Sbjct: 78 LSRPFQSIIHAKRTY---RELRLLKHMKHENVIGLLDVF-TPARSLEEFNDVYLVTHLM- 132
Query: 100 GGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDF 159
G +L + + ++ + Q++ ++Y HS + HRD I DF
Sbjct: 133 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 192
Query: 160 GLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAG 214
GL+ D + T Y APEI+ + VD+WS G ++ L G
Sbjct: 193 GLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 84
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 85 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 197
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 76
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 77 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 189
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 19/247 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+ IG G F V G G VA+K + + L E S+M++LRH N+V+L
Sbjct: 199 QTIGKGEFGDVMLGD--YRGNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQL 251
Query: 82 YEVLA-TKAKIYFVMEFAKGGELFAKI-SKGR--FSEQLSRRYFQQLISAVEYCHSRGVF 137
V+ K +Y V E+ G L + S+GR ++ + A+EY
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
HRD +SDFGL+ + G L + APE L +K +
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREKKFS-T 365
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG-EYRCPKWTSPDLKWFIGRLLDT 255
K D+WS G++L+ + + G +P+ L + ++ KG + P P + +
Sbjct: 366 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHL 425
Query: 256 DPATRIT 262
D ATR T
Sbjct: 426 DAATRPT 432
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 81
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 82 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 194
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
Y K+IG G+F VY + +G+ VAIK V + K + RE+ IM +L H N
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKLDHCN 74
Query: 78 IVKL----YEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLS----RRYFQQLISA 127
IV+L Y K +Y + E ++++ R + L + Y QL +
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 128 VEYCHSRGVFHRDXXXXXXXX-XXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ Y HS G+ HRD + DFG + K+ +R + + +C Y AP
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG--SAKQLVRGEPNVSXICSR-YYRAP 191
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAG 214
E++ + +D+WS G VL L G
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 76
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 77 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 189
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 75
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 76 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 188
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 90
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 91 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 203
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 101
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 162 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 218
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 219 MLNSKGYTKS-IDIWSVGCIL 238
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 85
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 86 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 198
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 77
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 78 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 135
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 190
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 99
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 100 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 212
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIV 79
+G G F KV Y TG+ VA+K++ + G A +K+EI I+ L H NIV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIV 74
Query: 80 KLYEVLATK---AKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSR 134
K Y+ + T+ I +MEF G L + +K + + + +Y Q+ ++Y SR
Sbjct: 75 K-YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKKG 193
HRD I DFGL+ E + + +P + APE L +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPF--NDPNLMAMYRKI 230
+ A D+WS GV L L L + +D + MA++ K+
Sbjct: 194 FYIAS-DVWSFGVTLHEL----LTYCDSDSSPMALFLKM 227
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIV 79
+G G F KV Y TG+ VA+K++ + G A +K+EI I+ L H NIV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIV 86
Query: 80 KLYEVLATK---AKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSR 134
K Y+ + T+ I +MEF G L + +K + + + +Y Q+ ++Y SR
Sbjct: 87 K-YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKKG 193
HRD I DFGL+ E + + +P + APE L +
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPF--NDPNLMAMYRKI 230
+ A D+WS GV L L L + +D + MA++ K+
Sbjct: 206 FYIAS-DVWSFGVTLHEL----LTYCDSDSSPMALFLKM 239
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 98
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 99 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ D + T Y APE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPE 211
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAI+ +S + REI I+ R RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFE--HQTYCQRTLREIKILLRFRHE 85
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 202
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 203 MLNSKGYTKS-IDIWSVGCIL 222
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ R RH
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 85
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH 145
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 202
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 203 MLNSKGYTKS-IDIWSVGCIL 222
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 15/216 (6%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTA-HVKREISIMSRLRHPNIVKLY 82
+G GA+ V + RTG VAIK + + + L A RE+ ++ +RH N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRP--FQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 83 EVLATKAKI------YFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
+V + Y VM F G +L + + E + Q++ + Y H+ G+
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGI 149
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I DFGL+ + D + T Y APE++
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEVILNWMRYT 204
Query: 197 AKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYK 232
VD+WS G ++ + G F + + ++I K
Sbjct: 205 QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK 240
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 22/273 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G V+ + +G +A K + + ++ + + RE+ ++ P IV Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 84 VLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG-VFHRDX 141
+ +I ME GG L + K GR EQ+ + +I + Y + + HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDM 201
+ DFG+S Q+ D M ++ GT +Y++PE L Y + D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 202 WSCGVVLFVLNAGYLPFNDPNL-------MAMYRKI-YKGEYRCPKWTSP----DLKWFI 249
WS G+ L + G P P+ MA++ + Y PK S + + F+
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 246
Query: 250 GRLLDTDPATRITVDEILRDPWFKK-DYKERKF 281
+ L +PA R + +++ + K+ D +E F
Sbjct: 247 NKCLIKNPAERADLKQLMVHAFIKRSDAEEVDF 279
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G+F VY G+ VA+K + A + E++++ + RH NI+ L+
Sbjct: 44 IGSGSFGTVYKGK---WHGDVAVKILKVVDPTPEQFQA-FRNEVAVLRKTRHVNIL-LFM 98
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRY--FQQLISAVEYCHSRGVFHRDX 141
TK + V ++ +G L+ + Q+ + +Q ++Y H++ + HRD
Sbjct: 99 GYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM 158
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD--GAKV 199
I DFGL+ VK + + G+ ++APE++ + + +
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 200 DMWSCGVVLFVLNAGYLPFNDPN 222
D++S G+VL+ L G LP++ N
Sbjct: 219 DVYSYGIVLYELMTGELPYSHIN 241
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I D+GL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 84 VLATKAKIYFVMEFAKGGEL---FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V + Y ++EF G L + ++ S + Q+ SA+EY + HRD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 193
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 239
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 84 VLATKAKIYFVMEFAKGGEL---FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V + Y ++EF G L + ++ S + Q+ SA+EY + HRD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 193
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 239
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 18/217 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+ IG G F V G G VA+K + + L E S+M++LRH N+V+L
Sbjct: 12 QTIGKGEFGDVMLGD--YRGNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQL 64
Query: 82 YEVLA-TKAKIYFVMEFAKGGELFAKI-SKGR--FSEQLSRRYFQQLISAVEYCHSRGVF 137
V+ K +Y V E+ G L + S+GR ++ + A+EY
Sbjct: 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 124
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
HRD +SDFGL+ + G L + APE L +K +
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREKKF-ST 178
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG 233
K D+WS G++L+ + + G +P+ L + ++ KG
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 215
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 18/217 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+ IG G F V G G VA+K + + L E S+M++LRH N+V+L
Sbjct: 27 QTIGKGEFGDVMLGD--YRGNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQL 79
Query: 82 YEVLA-TKAKIYFVMEFAKGGELFAKI-SKGR--FSEQLSRRYFQQLISAVEYCHSRGVF 137
V+ K +Y V E+ G L + S+GR ++ + A+EY
Sbjct: 80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 139
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
HRD +SDFGL+ + G L + APE L +K +
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREKKFS-T 193
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG 233
K D+WS G++L+ + + G +P+ L + ++ KG
Sbjct: 194 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 230
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 84 VLATKAKIYFVMEFAKGGEL---FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + ++ S + Q+ SA+EY + HRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 198
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 244
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y ++EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHAGAKFPIKWTAPESLAYNKF-SIKS 194
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 240
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 38/290 (13%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
+ + EV +++G GAF V + + VAIK + + + + E+ +SR+
Sbjct: 8 YKEIEVEEVVGRGAFGVVCKAK--WRAKDVAIKQIESESERKAFIV-----ELRQLSRVN 60
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR----FSEQLSRRYFQQLISAVEY 130
HPNIVKLY A + VME+A+GG L+ + ++ + + Q V Y
Sbjct: 61 HPNIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 131 CHS---RGVFHRDXXXXXXXXXX-XXXXXISDFGLSAVKEQIRPDGMLHTLC--GTPAYV 184
HS + + HRD I DFG + D H G+ A++
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-------DIQTHMTNNKGSAAWM 171
Query: 185 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFND---PNLMAMYRKIYKGEYRCP--K 239
APE+ Y K D++S G++L+ + PF++ P M+ ++ G R P K
Sbjct: 172 APEVFEGSNYS-EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW-AVHNGT-RPPLIK 228
Query: 240 WTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLK 289
++ + R DP+ R +++EI++ + R FP D L+
Sbjct: 229 NLPKPIESLMTRCWSKDPSQRPSMEEIVK----IMTHLMRYFPGADEPLQ 274
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 109/316 (34%), Gaps = 78/316 (24%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YE+ + IG GA+ V R TGQ VAIK + + RE+ I+ +H
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN-AKRTLRELKILKHFKHD 113
Query: 77 NIVKLYEVLATKA------KIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEY 130
NI+ + ++L +Y V++ + S + + R + QL+ ++Y
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 131 CHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA-------- 182
HS V HRD I DF GM LC +PA
Sbjct: 174 MHSAQVIHRDLKPSNLLVNENCELKIGDF------------GMARGLCTSPAEHQYFMTE 221
Query: 183 ------YVAPEILAKKGYDGAKVDMWSCG-----------------------VVLFVLNA 213
Y APE++ +D+WS G +++ VL
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT 281
Query: 214 ---------------GYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPA 258
Y+ P + +Y G R +GR+L +P+
Sbjct: 282 PSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADR-------QALSLLGRMLRFEPS 334
Query: 259 TRITVDEILRDPWFKK 274
RI+ LR P+ K
Sbjct: 335 ARISAAAALRHPFLAK 350
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 84 VLATKAKIYFVMEFAKGGEL---FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + ++ S + Q+ SA+EY + HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 193
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 239
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DF L+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ RH
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLAFRHE 83
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 144 SANVLHRDLKPSNLLLNTTSDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 200
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 201 MLNSKGYTKS-IDIWSVGCIL 220
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 38/290 (13%)
Query: 15 FGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
+ + EV +++G GAF V + + VAIK + + + + E+ +SR+
Sbjct: 7 YKEIEVEEVVGRGAFGVVCKAK--WRAKDVAIKQIESESERKAFIV-----ELRQLSRVN 59
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR----FSEQLSRRYFQQLISAVEY 130
HPNIVKLY A + VME+A+GG L+ + ++ + + Q V Y
Sbjct: 60 HPNIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 131 CHS---RGVFHRDXXXXXXXXXX-XXXXXISDFGLSAVKEQIRPDGMLHTLC--GTPAYV 184
HS + + HRD I DFG + D H G+ A++
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-------DIQTHMTNNKGSAAWM 170
Query: 185 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFND---PNLMAMYRKIYKGEYRCP--K 239
APE+ Y K D++S G++L+ + PF++ P M+ ++ G R P K
Sbjct: 171 APEVFEGSNYS-EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW-AVHNGT-RPPLIK 227
Query: 240 WTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKFPHEDFDLK 289
++ + R DP+ R +++EI++ + R FP D L+
Sbjct: 228 NLPKPIESLMTRCWSKDPSQRPSMEEIVK----IMTHLMRYFPGADEPLQ 273
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVS-------KQKILR 56
+I RE + E+G+ IG G F V+ G + +VAIK ++K L+
Sbjct: 386 EIQRE-----RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 57 GGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQL 116
LT M + HP+IVKL V+ T+ ++ +ME GEL + + +FS L
Sbjct: 441 EALT---------MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDL 490
Query: 117 SRR--YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGML 174
+ Y QL +A+ Y S+ HRD + DFGLS E D
Sbjct: 491 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME----DSTY 546
Query: 175 HTLCGTP---AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
+ ++APE + + + A D+W GV ++ +L G PF + +I
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEI 266
GE P P L + + DP+ R E+
Sbjct: 606 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 84 VLATKAKIYFVMEFAKGGEL---FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + ++ S + Q+ SA+EY + HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 193
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 239
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 IGDST------FTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME L I E
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LSQVIQMELDHE 126
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
++S +Q L+ +++ HS G+ HRD I DFGL+ R G
Sbjct: 127 RMSYLLYQMLV-GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
M+ T Y APE++ GY VD+WS GV++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGVIM 215
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 1 MGDNTGD--ISREVNLFGKYEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVS----- 50
MG +T D I RE + E+G+ IG G F V+ G + +VAIK
Sbjct: 26 MGSSTRDYEIQRE-----RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD 80
Query: 51 --KQKILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS 108
++K L+ LT M + HP+IVKL V+ T+ ++ +ME GEL + +
Sbjct: 81 SVREKFLQEALT---------MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ 130
Query: 109 KGRFSEQLSRR--YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKE 166
++S L+ Y QL +A+ Y S+ HRD + DFGLS E
Sbjct: 131 VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 190
Query: 167 QIR----PDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDP 221
G L ++APE + + + A D+W GV ++ +L G PF
Sbjct: 191 DSTYYKASKGKLPI-----KWMAPESINFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGV 244
Query: 222 NLMAMYRKIYKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEI 266
+ +I GE P P L + + DP+ R E+
Sbjct: 245 KNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 109/316 (34%), Gaps = 78/316 (24%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YE+ + IG GA+ V R TGQ VAIK + + RE+ I+ +H
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN-AKRTLRELKILKHFKHD 114
Query: 77 NIVKLYEVLATKA------KIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEY 130
NI+ + ++L +Y V++ + S + + R + QL+ ++Y
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 131 CHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA-------- 182
HS V HRD I DF GM LC +PA
Sbjct: 175 MHSAQVIHRDLKPSNLLVNENCELKIGDF------------GMARGLCTSPAEHQYFMTE 222
Query: 183 ------YVAPEILAKKGYDGAKVDMWSCG-----------------------VVLFVLNA 213
Y APE++ +D+WS G +++ VL
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT 282
Query: 214 ---------------GYLPFNDPNLMAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPA 258
Y+ P + +Y G R +GR+L +P+
Sbjct: 283 PSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADR-------QALSLLGRMLRFEPS 335
Query: 259 TRITVDEILRDPWFKK 274
RI+ LR P+ K
Sbjct: 336 ARISAAAALRHPFLAK 351
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 110/280 (39%), Gaps = 49/280 (17%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
++IG G F +V+ ++ G++ I+ V +RE+ +++L H NIV
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYN-------NEKAEREVKALAKLDHVNIVHY 70
Query: 82 --------YEVLAT--------------------KAKIYFV-MEFAKGGELFAKISKGR- 111
Y+ + K K F+ MEF G L I K R
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 112 --FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIR 169
+ L+ F+Q+ V+Y HS+ + HRD I DFGL ++
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVT---SLK 187
Query: 170 PDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYR 228
DG GT Y++PE ++ + Y G +VD+++ G++L +L+ F R
Sbjct: 188 NDGKRTRSKGTLRYMSPEQISSQDY-GKEVDLYALGLILAELLHVCDTAFETSKFFTDLR 246
Query: 229 KIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDEILR 268
+ K K + +LL P R EILR
Sbjct: 247 DGIISDIFDKKE-----KTLLQKLLSKKPEDRPNTSEILR 281
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVS-------KQKILR 56
+I RE + E+G+ IG G F V+ G + +VAIK ++K L+
Sbjct: 386 EIQRE-----RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 57 GGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQL 116
LT M + HP+IVKL V+ T+ ++ +ME GEL + + +FS L
Sbjct: 441 EALT---------MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDL 490
Query: 117 SRR--YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGML 174
+ Y QL +A+ Y S+ HRD + DFGLS E D
Sbjct: 491 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME----DSTY 546
Query: 175 HTLCGTP---AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
+ ++APE + + + A D+W GV ++ +L G PF + +I
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEI 266
GE P P L + + DP+ R E+
Sbjct: 606 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 115/278 (41%), Gaps = 39/278 (14%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVS-------KQKILR 56
+I RE + E+G+ IG G F V+ G + +VAIK ++K L+
Sbjct: 6 EIQRE-----RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 57 GGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQL 116
LT M + HP+IVKL V+ T+ ++ +ME GEL + + +FS L
Sbjct: 61 EALT---------MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDL 110
Query: 117 SRR--YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIR----P 170
+ Y QL +A+ Y S+ HRD + DFGLS E
Sbjct: 111 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKAS 170
Query: 171 DGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRK 229
G L ++APE + + + A D+W GV ++ +L G PF + +
Sbjct: 171 KGKLPI-----KWMAPESINFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
Query: 230 IYKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEI 266
I GE P P L + + DP+ R E+
Sbjct: 225 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 1 MGDNTGD--ISREVNLFGKYEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVS----- 50
MG +T D I RE + E+G+ IG G F V+ G + +VAIK
Sbjct: 3 MGSSTRDYEIQRE-----RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSD 57
Query: 51 --KQKILRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKIS 108
++K L+ LT M + HP+IVKL V+ T+ ++ +ME GEL + +
Sbjct: 58 SVREKFLQEALT---------MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ 107
Query: 109 KGRFSEQLSRR--YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKE 166
++S L+ Y QL +A+ Y S+ HRD + DFGLS E
Sbjct: 108 VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167
Query: 167 QIR----PDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDP 221
G L ++APE + + + A D+W GV ++ +L G PF
Sbjct: 168 DSTYYKASKGKLPI-----KWMAPESINFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGV 221
Query: 222 NLMAMYRKIYKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEI 266
+ +I GE P P L + + DP+ R E+
Sbjct: 222 KNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 16/267 (5%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G V+ + +G +A K + + ++ + + RE+ ++ P IV Y
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 90
Query: 84 VLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG-VFHRDX 141
+ +I ME GG L + K GR EQ+ + +I + Y + + HRD
Sbjct: 91 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 150
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDM 201
+ DFG+S Q+ D M ++ GT +Y++PE L Y + D+
Sbjct: 151 KPSNILVNSRGEIKLCDFGVSG---QL-IDSMANSFVGTRSYMSPERLQGTHYS-VQSDI 205
Query: 202 WSCGVVLFVLNAGYLPFND-PNLMAMYRKI-YKGEYRCPKWTSP----DLKWFIGRLLDT 255
WS G+ L + G P MA++ + Y PK S + + F+ + L
Sbjct: 206 WSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 265
Query: 256 DPATRITVDEILRDPWFKK-DYKERKF 281
+PA R + +++ + K+ D +E F
Sbjct: 266 NPAERADLKQLMVHAFIKRSDAEEVDF 292
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+Y IG GA+ V + VAIK +S + REI I+ RH
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLAFRHE 83
Query: 77 NIVKLYEVLAT----KAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCH 132
NI+ + +++ + K ++++ +L+ + S + Q++ ++Y H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD----GMLHTLCGTPAYVAPEI 188
S V HRD I DFGL+ V + PD G L T Y APEI
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD---PDHDHTGFLTEYVATRWYRAPEI 200
Query: 189 -LAKKGYDGAKVDMWSCGVVL 208
L KGY + +D+WS G +L
Sbjct: 201 MLNSKGYTKS-IDIWSVGCIL 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 86
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 87 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ + D M T Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMT-GYVATRWYRAPE 199
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 86
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 87 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ + D M T Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMT-GYVATRWYRAPE 199
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G F +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 84 VLATKAKIYFVMEFAKGGEL---FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + ++ S + Q+ SA+EY + HRD
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHAGAKFPIKWTAPESLAYNKF-SIKS 191
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ + +Y + K +YR CP+
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-DYRMERPEGCPE 237
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 115/278 (41%), Gaps = 39/278 (14%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVS-------KQKILR 56
+I RE + E+G+ IG G F V+ G + +VAIK ++K L+
Sbjct: 6 EIQRE-----RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 57 GGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQL 116
LT M + HP+IVKL V+ T+ ++ +ME GEL + + +FS L
Sbjct: 61 EALT---------MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDL 110
Query: 117 SRR--YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIR----P 170
+ Y QL +A+ Y S+ HRD + DFGLS E
Sbjct: 111 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 171 DGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRK 229
G L ++APE + + + A D+W GV ++ +L G PF + +
Sbjct: 171 KGKLPI-----KWMAPESINFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
Query: 230 IYKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEI 266
I GE P P L + + DP+ R E+
Sbjct: 225 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT---YRELRLLKHMK 86
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 87 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I DFGL+ + D M T Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMT-GYVATRWYRAPE 199
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 18/217 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+ IG G F V G G VA+K + + L E S+M++LRH N+V+L
Sbjct: 18 QTIGKGEFGDVMLGD--YRGNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQL 70
Query: 82 YEVLA-TKAKIYFVMEFAKGGELFAKI-SKGR--FSEQLSRRYFQQLISAVEYCHSRGVF 137
V+ K +Y V E+ G L + S+GR ++ + A+EY
Sbjct: 71 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 130
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
HRD +SDFGL+ + G L + APE L + +
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREAAFS-T 184
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG 233
K D+WS G++L+ + + G +P+ L + ++ KG
Sbjct: 185 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 221
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y ++EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 198
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 244
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 141 XXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
++DFGLS + P G + + APE LA +
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI----KWTAPESLAYNKF-SI 192
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
K D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 193 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 240
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 75
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +MEF G L + + K R +Y Q+ +EY +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 196 KFSVAS-DVWSFGVVLYEL 213
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 141 XXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGA 197
++DFGLS + P G + + APE LA +
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI----KWTAPESLAYNKF-SI 193
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
K D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 241
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHAGAKFPIKWTAPESLAYNKF-SIKS 198
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 244
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 21/216 (9%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAV----SKQKILRGGLTAHVKREISIMSRLR 74
E K IG G F V+ GR V+ VAIK++ S+ + +RE+ IMS L
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLS--RRYFQQLISAVEYCH 132
HPNIVKLY ++ ++ VMEF G+L+ ++ + S R + +EY
Sbjct: 82 HPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 133 SRG--VFHRDXXX-----XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
++ + HRD ++DFGLS + L G ++A
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH-----SVSGLLGNFQWMA 194
Query: 186 PEIL-AKKGYDGAKVDMWSCGVVLFVLNAGYLPFND 220
PE + A++ K D +S ++L+ + G PF++
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 195
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 241
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 198
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 244
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I FGL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME L I E
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LSQVIQMELDHE 126
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
++S +Q L+ +++ HS G+ HRD I DFGL+ R G
Sbjct: 127 RMSYLLYQMLV-GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
M+ T Y APE++ GY VD+WS GV++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGVIM 215
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I D GL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 89
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 149
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 206
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 207 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 252
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 195
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 241
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I D GL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 198
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 244
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 84 VLATKAKIYFVMEFAKGGEL---FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V + Y ++EF G L + ++ S + Q+ SA+EY + HRD
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRL--MTGDTXTAHAGAKFPIKWTAPESLAYNKF-SIKS 191
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ + +Y + K +YR CP+
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-DYRMERPEGCPE 237
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 80
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 140
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 197
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 243
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 16/227 (7%)
Query: 22 KIIGCGAFAKVYHGR-NVRTGQSVAIKAVSKQKILRGGLTAHVKR----EISIMSRLRHP 76
K+IG G F +VY G +G+ A+ K L+ G T + E IM + H
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAI---KTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSR 134
NI++L V++ + + E+ + G L F + G FS + + + ++Y +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA--YVAPEILAKK 192
HRD +SDFGLS V E P+ T G + APE ++ +
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED-DPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 193 GYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+ A D+WS G+V++ V+ G P+ + + + + I G +R P
Sbjct: 226 KFTSAS-DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-FRLP 270
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 15/249 (6%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 95
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF---QQLISAVEYCHSRGVFHRD 140
V + Y V E+ G L + + E + Q+ SA+EY + HRD
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRD 155
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA-YVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNTFS-IKS 212
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRC--PKWTSPDLKWFIGRLLDTD 256
D+W+ GV+L+ + G P+ +L +Y + KG YR P+ P + +
Sbjct: 213 DVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKG-YRMEQPEGCPPKVYELMRACWKWS 271
Query: 257 PATRITVDE 265
PA R + E
Sbjct: 272 PADRPSFAE 280
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 122/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 239 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 298 LSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 193
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 239
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 19/207 (9%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSK--QKILRGGLTAHVKREISIMSRLR 74
+Y+ +G GA+ V + +TG VA+K +S+ Q I+ T RE+ ++ ++
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---RELRLLKHMK 79
Query: 75 HPNIVKLYEVLATKAK-------IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISA 127
H N++ L +V T A+ +Y V G +L + + ++ + Q++
Sbjct: 80 HENVIGLLDVF-TPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE 187
++Y HS + HRD I D GL+ D + T Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMTGYVATRWYRAPE 192
Query: 188 ILAKKGYDGAKVDMWSCGVVLFVLNAG 214
I+ + VD+WS G ++ L G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 122/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 239 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 298 LSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 122/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 239 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 298 LSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 75
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 196 KFSVAS-DVWSFGVVLYEL 213
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKF-SIKS 193
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 239
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 77
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 198 KFSVAS-DVWSFGVVLYEL 215
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 115/278 (41%), Gaps = 39/278 (14%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVS-------KQKILR 56
+I RE + E+G+ IG G F V+ G + +VAIK ++K L+
Sbjct: 6 EIQRE-----RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 57 GGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQL 116
LT M + HP+IVKL V+ T+ ++ +ME GEL + + ++S L
Sbjct: 61 EALT---------MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL 110
Query: 117 SRR--YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIR----P 170
+ Y QL +A+ Y S+ HRD + DFGLS E
Sbjct: 111 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 171 DGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRK 229
G L ++APE + + + A D+W GV ++ +L G PF + +
Sbjct: 171 KGKLPI-----KWMAPESINFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
Query: 230 IYKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEI 266
I GE P P L + + DP+ R E+
Sbjct: 225 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 79
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 200 KFSVAS-DVWSFGVVLYEL 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 76
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 197 KFSVAS-DVWSFGVVLYEL 214
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 84 VLATKAKIYFVMEFAKGGEL---FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + ++ S + Q+ SA+EY + HR+
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRN 343
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFS-IKS 400
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 446
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 78
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 199 KFSVAS-DVWSFGVVLYEL 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 72
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 193 KFSVAS-DVWSFGVVLYEL 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 71
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 192 KFSVAS-DVWSFGVVLYEL 209
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 72
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 193 KFSVAS-DVWSFGVVLYEL 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 70
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 191 KFSVAS-DVWSFGVVLYEL 208
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 87/216 (40%), Gaps = 22/216 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YEV K+IG G+F +V + + Q VA+K V +K EI I+ LR
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 77 ------NIVKLYEVLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAV 128
N++ + E + I E EL K FS L R++ ++ +
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 129 EYCHSRGVFHRDXXXXXXXXXXXXXXXIS--DFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ H + H D I DFG S + Q ++T + Y AP
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-----RVYTXIQSRFYRAP 268
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGY--LPFND 220
E++ Y G +DMWS G +L L GY LP D
Sbjct: 269 EVILGARY-GMPIDMWSLGCILAELLTGYPLLPGED 303
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 93/223 (41%), Gaps = 9/223 (4%)
Query: 24 IGCGAFAKVYHGR-NVRTGQ--SVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
+G G+F V G + +G+ SVA+K + + + RE++ M L H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 81 LYEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLSRRYFQQLISAVEYCHSRGVFH 138
LY V+ T + V E A G L ++ K G F RY Q+ + Y S+ H
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGA 197
RD I DFGL Q ++ P A+ APE L + + A
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHA 194
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
D W GV L+ + G P+ N + KI K R P+
Sbjct: 195 S-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 93/223 (41%), Gaps = 9/223 (4%)
Query: 24 IGCGAFAKVYHGR-NVRTGQ--SVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
+G G+F V G + +G+ SVA+K + + + RE++ M L H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 81 LYEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLSRRYFQQLISAVEYCHSRGVFH 138
LY V+ T + V E A G L ++ K G F RY Q+ + Y S+ H
Sbjct: 86 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGA 197
RD I DFGL Q ++ P A+ APE L + + A
Sbjct: 145 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHA 204
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
D W GV L+ + G P+ N + KI K R P+
Sbjct: 205 S-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 87/216 (40%), Gaps = 22/216 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YEV K+IG G+F +V + + Q VA+K V +K EI I+ LR
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 77 ------NIVKLYEVLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAV 128
N++ + E + I E EL K FS L R++ ++ +
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 129 EYCHSRGVFHRDXXXXXXXXXXXXXXXIS--DFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ H + H D I DFG S + Q ++T + Y AP
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-----RVYTXIQSRFYRAP 268
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGY--LPFND 220
E++ Y G +DMWS G +L L GY LP D
Sbjct: 269 EVILGARY-GMPIDMWSLGCILAELLTGYPLLPGED 303
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 103
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 224 KFSVAS-DVWSFGVVLYEL 241
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 90
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 211 KFSVAS-DVWSFGVVLYEL 228
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 121/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 239 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 298 LSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 122/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 239 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 298 LSKMLVIDPAKRISVDDALQHPYI 321
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 93/223 (41%), Gaps = 9/223 (4%)
Query: 24 IGCGAFAKVYHGR-NVRTGQ--SVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
+G G+F V G + +G+ SVA+K + + + RE++ M L H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 81 LYEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLSRRYFQQLISAVEYCHSRGVFH 138
LY V+ T + V E A G L ++ K G F RY Q+ + Y S+ H
Sbjct: 80 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGA 197
RD I DFGL Q ++ P A+ APE L + + A
Sbjct: 139 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA 198
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
D W GV L+ + G P+ N + KI K R P+
Sbjct: 199 S-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 84 VLATKAKIYFVMEFAKGGEL---FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + ++ S + Q+ SA+EY + HRD
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRL--MTGDTFTAHAGAKFPIKWTAPESLAYNKF-SIKS 191
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ + +Y + K +YR CP+
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-DYRMERPEGCPE 237
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 115/278 (41%), Gaps = 39/278 (14%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVS-------KQKILR 56
+I RE + E+G+ IG G F V+ G + +VAIK ++K L+
Sbjct: 6 EIQRE-----RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 57 GGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQL 116
LT M + HP+IVKL V+ T+ ++ +ME GEL + + ++S L
Sbjct: 61 EALT---------MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL 110
Query: 117 SRR--YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIR----P 170
+ Y QL +A+ Y S+ HRD + DFGLS E
Sbjct: 111 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 171 DGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRK 229
G L ++APE + + + A D+W GV ++ +L G PF + +
Sbjct: 171 KGKLPI-----KWMAPESINFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
Query: 230 IYKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEI 266
I GE P P L + + DP+ R E+
Sbjct: 225 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 90
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 211 KFSVAS-DVWSFGVVLYEL 228
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 121/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 16 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 68
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDH 126
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 180
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 239
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 240 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 298
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 299 LSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 121/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 14 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 66
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 67 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDH 124
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 125 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 178
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 179 FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 237
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 238 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 296
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 297 LSKMLVIDPAKRISVDDALQHPYI 320
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 121/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 239 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 297
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 298 LSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 121/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 16 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 68
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDH 126
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 180
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 239
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 240 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 298
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 299 LSKMLVIDPAKRISVDDALQHPYI 322
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 18/266 (6%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G V+ + +G +A K + + ++ + + RE+ ++ P IV Y
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 84 VLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG-VFHRDX 141
+ +I ME GG L + K GR EQ+ + +I + Y + + HRD
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 134
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDM 201
+ DFG+S Q+ D M + GT +Y++PE L Y + D+
Sbjct: 135 KPSNILVNSRGEIKLCDFGVSG---QLI-DEMANEFVGTRSYMSPERLQGTHYS-VQSDI 189
Query: 202 WSCGVVLFVLNAGYLPFNDPNLMAMYRKI-YKGEYRCPKWTSP----DLKWFIGRLLDTD 256
WS G+ L + G P P MA++ + Y PK S + + F+ + L +
Sbjct: 190 WSMGLSLVEMAVGRYP-RPP--MAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKN 246
Query: 257 PATRITVDEILRDPWFKK-DYKERKF 281
PA R + +++ + K+ D +E F
Sbjct: 247 PAERADLKQLMVHAFIKRSDAEEVDF 272
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 115/278 (41%), Gaps = 39/278 (14%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVS-------KQKILR 56
+I RE + E+G+ IG G F V+ G + +VAIK ++K L+
Sbjct: 9 EIQRE-----RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 57 GGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQL 116
LT M + HP+IVKL V+ T+ ++ +ME GEL + + ++S L
Sbjct: 64 EALT---------MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL 113
Query: 117 SRR--YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIR----P 170
+ Y QL +A+ Y S+ HRD + DFGLS E
Sbjct: 114 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 173
Query: 171 DGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRK 229
G L ++APE + + + A D+W GV ++ +L G PF + +
Sbjct: 174 KGKLPI-----KWMAPESINFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 227
Query: 230 IYKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEI 266
I GE P P L + + DP+ R E+
Sbjct: 228 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 37/282 (13%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-H 75
+ V +++ G FA VY ++V +G+ A+K + + + + +E+ M +L H
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEK---NRAIIQEVCFMKKLSGH 85
Query: 76 PNIVKLYEVLAT--------KAKIYFVMEFAKGG--ELFAKI-SKGRFSEQLSRRYFQQL 124
PNIV+ + +A+ + E KG E K+ S+G S + F Q
Sbjct: 86 PNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQT 145
Query: 125 ISAVEYCHSR--GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD--------GML 174
AV++ H + + HRD + DFG SA PD ++
Sbjct: 146 CRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG-SATTISHYPDYSWSAQRRALV 204
Query: 175 H---TLCGTPAYVAPEI--LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRK 229
T TP Y PEI L G K D+W+ G +L++L PF D + +
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL----R 260
Query: 230 IYKGEYRCPKWTS--PDLKWFIGRLLDTDPATRITVDEILRD 269
I G+Y P + I +L +P R+++ E++
Sbjct: 261 IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 121/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 9 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 61
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDH 119
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 173
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 174 FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 232
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 233 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 291
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 292 LSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 115/278 (41%), Gaps = 39/278 (14%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVS-------KQKILR 56
+I RE + E+G+ IG G F V+ G + +VAIK ++K L+
Sbjct: 3 EIQRE-----RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 57
Query: 57 GGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQL 116
LT M + HP+IVKL V+ T+ ++ +ME GEL + + ++S L
Sbjct: 58 EALT---------MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL 107
Query: 117 SRR--YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIR----P 170
+ Y QL +A+ Y S+ HRD + DFGLS E
Sbjct: 108 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 167
Query: 171 DGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRK 229
G L ++APE + + + A D+W GV ++ +L G PF + +
Sbjct: 168 KGKLPI-----KWMAPESINFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 221
Query: 230 IYKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEI 266
I GE P P L + + DP+ R E+
Sbjct: 222 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G V+ + +G +A K + + ++ + + RE+ ++ P IV Y
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 98
Query: 84 VLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG-VFHRDX 141
+ +I ME GG L + K GR EQ+ + +I + Y + + HRD
Sbjct: 99 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 158
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDM 201
+ DFG+S Q+ D M ++ GT +Y++PE L Y + D+
Sbjct: 159 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 213
Query: 202 WSCGVVLFVLNAGYLPFNDPN 222
WS G+ L + G P P+
Sbjct: 214 WSMGLSLVEMAVGRYPIPPPD 234
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 115/295 (38%), Gaps = 49/295 (16%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRH-P 76
Y++ + +G G +++V+ N+ + V +K IL+ +KREI I+ LR P
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVK------ILKPVKKNKIKREIKILENLRGGP 92
Query: 77 NIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
NI+ L +++ + F K ++ R Y +++ A++YCHS G+
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 137 FHRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
HRD + D+GL+ E P + + + PE+L
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLA---EFYHPGQEYNVRVASRYFKGPELLVDYQMY 209
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMA---------MYRKIYK--------- 232
+DMWS G +L + PF N L+ +Y I K
Sbjct: 210 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 269
Query: 233 ----GEYRCPKW-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWF 272
G + +W SP+ F+ +LL D +R+T E + P+F
Sbjct: 270 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 121/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 53 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 105
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDH 163
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 217
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 218 FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 276
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 277 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 335
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 336 LSKMLVIDPAKRISVDDALQHPYI 359
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 122/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 8 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 60
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDH 118
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 119 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTS 172
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 173 FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 231
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 232 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 290
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 291 LSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 121/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 8 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 60
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDH 118
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 119 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 172
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 173 FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 231
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 232 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 290
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 291 LSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 115/278 (41%), Gaps = 39/278 (14%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVS-------KQKILR 56
+I RE + E+G+ IG G F V+ G + +VAIK ++K L+
Sbjct: 8 EIQRE-----RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 57 GGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQL 116
LT M + HP+IVKL V+ T+ ++ +ME GEL + + ++S L
Sbjct: 63 EALT---------MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL 112
Query: 117 SRR--YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIR----P 170
+ Y QL +A+ Y S+ HRD + DFGLS E
Sbjct: 113 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 172
Query: 171 DGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRK 229
G L ++APE + + + A D+W GV ++ +L G PF + +
Sbjct: 173 KGKLPI-----KWMAPESINFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 226
Query: 230 IYKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEI 266
I GE P P L + + DP+ R E+
Sbjct: 227 IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 93/223 (41%), Gaps = 9/223 (4%)
Query: 24 IGCGAFAKVYHGR-NVRTGQ--SVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
+G G+F V G + +G+ SVA+K + + + RE++ M L H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 81 LYEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLSRRYFQQLISAVEYCHSRGVFH 138
LY V+ T + V E A G L ++ K G F RY Q+ + Y S+ H
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGA 197
RD I DFGL Q ++ P A+ APE L + + A
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA 194
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
D W GV L+ + G P+ N + KI K R P+
Sbjct: 195 S-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 31/221 (14%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E + +G G F V+ +N + AIK + R V RE+ +++L HP
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPG 64
Query: 78 IVKLY------------EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR-----Y 120
IV+ + + + K +Y M+ + L GR + + R
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENL-KDWMNGRCTIEERERSVCLHI 123
Query: 121 FQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQ---------IRPD 171
F Q+ AVE+ HS+G+ HRD + DFGL +Q P
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 172 GMLHT-LCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVL 211
HT GT Y++PE + Y KVD++S G++LF L
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSY-SHKVDIFSLGLILFEL 223
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 121/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 53 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 105
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDH 163
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 217
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 218 FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 276
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 277 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 335
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 336 LSKMLVIDPAKRISVDDALQHPYI 359
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAV----SKQKILRGGLTAHVKREISIMSRLR 74
E K IG G F V+ GR V+ VAIK++ S+ + +RE+ IMS L
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLS--RRYFQQLISAVEYCH 132
HPNIVKLY ++ ++ VMEF G+L+ ++ + S R + +EY
Sbjct: 82 HPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 133 SRG--VFHRDXXX-----XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
++ + HRD ++DFG S + L G ++A
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVH-----SVSGLLGNFQWMA 194
Query: 186 PEIL-AKKGYDGAKVDMWSCGVVLFVLNAGYLPFND 220
PE + A++ K D +S ++L+ + G PF++
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 121/324 (37%), Gaps = 69/324 (21%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 9 VGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 61
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDH 119
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 173
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL--FVLNAGYLPFND--------- 220
M+ T Y APE++ GY VD+WS G ++ V + P D
Sbjct: 174 FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 232
Query: 221 -------PNLMAMYRKIYKG--EYRCPKW---TSPDL--------------------KWF 248
P M + + E R PK+ T P L +
Sbjct: 233 EQLGTPCPEFMKKLQPTVRNYVENR-PKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 291
Query: 249 IGRLLDTDPATRITVDEILRDPWF 272
+ ++L DPA RI+VD+ L+ P+
Sbjct: 292 LSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G V+ + +G +A K + + ++ + + RE+ ++ P IV Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 84 VLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG-VFHRDX 141
+ +I ME GG L + K GR EQ+ + +I + Y + + HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDM 201
+ DFG+S Q+ D M ++ GT +Y++PE L Y + D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 202 WSCGVVLFVLNAGYLPFNDPN 222
WS G+ L + G P P+
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPD 207
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G V+ + +G +A K + + ++ + + RE+ ++ P IV Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 84 VLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG-VFHRDX 141
+ +I ME GG L + K GR EQ+ + +I + Y + + HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDM 201
+ DFG+S Q+ D M ++ GT +Y++PE L Y + D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 202 WSCGVVLFVLNAGYLPFNDPN 222
WS G+ L + G P P+
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPD 207
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 90/217 (41%), Gaps = 25/217 (11%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME L I E
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LSQVIQMELDHE 126
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
++S +Q L+ +++ HS G+ HRD I DFGL+ R G
Sbjct: 127 RMSYLLYQMLV-GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
M+ T Y APE++ GY VD+WS G ++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIM 215
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 93/223 (41%), Gaps = 9/223 (4%)
Query: 24 IGCGAFAKVYHGR-NVRTGQ--SVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
+G G+F V G + +G+ SVA+K + + + RE++ M L H N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 81 LYEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLSRRYFQQLISAVEYCHSRGVFH 138
LY V+ T + V E A G L ++ K G F RY Q+ + Y S+ H
Sbjct: 86 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGA 197
RD I DFGL Q ++ P A+ APE L + + A
Sbjct: 145 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA 204
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
D W GV L+ + G P+ N + KI K R P+
Sbjct: 205 S-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME +++ +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
M+ T Y APE++ GY VD+WS G ++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIM 215
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 93/223 (41%), Gaps = 9/223 (4%)
Query: 24 IGCGAFAKVYHGR-NVRTGQ--SVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
+G G+F V G + +G+ SVA+K + + + RE++ M L H N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 81 LYEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLSRRYFQQLISAVEYCHSRGVFH 138
LY V+ T + V E A G L ++ K G F RY Q+ + Y S+ H
Sbjct: 80 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGA 197
RD I DFGL Q ++ P A+ APE L + + A
Sbjct: 139 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA 198
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
D W GV L+ + G P+ N + KI K R P+
Sbjct: 199 S-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 93/223 (41%), Gaps = 9/223 (4%)
Query: 24 IGCGAFAKVYHGR-NVRTGQ--SVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
+G G+F V G + +G+ SVA+K + + + RE++ M L H N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 81 LYEVLATKAKIYFVMEFAKGGELFAKISK--GRFSEQLSRRYFQQLISAVEYCHSRGVFH 138
LY V+ T + V E A G L ++ K G F RY Q+ + Y S+ H
Sbjct: 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGA 197
RD I DFGL Q ++ P A+ APE L + + A
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA 194
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
D W GV L+ + G P+ N + KI K R P+
Sbjct: 195 S-DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G V+ + +G +A K + + ++ + + RE+ ++ P IV Y
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 133
Query: 84 VLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG-VFHRDX 141
+ +I ME GG L + K GR EQ+ + +I + Y + + HRD
Sbjct: 134 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 193
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDM 201
+ DFG+S Q+ D M ++ GT +Y++PE L Y + D+
Sbjct: 194 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 248
Query: 202 WSCGVVLFVLNAGYLPFNDPN 222
WS G+ L + G P P+
Sbjct: 249 WSMGLSLVEMAVGRYPIPPPD 269
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAV----SKQKILRGGLTAHVKREISIMSRLR 74
E K IG G F V+ GR V+ VAIK++ S+ + +RE+ IMS L
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLS--RRYFQQLISAVEYCH 132
HPNIVKLY ++ ++ VMEF G+L+ ++ + S R + +EY
Sbjct: 82 HPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 133 SRG--VFHRDXXX-----XXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
++ + HRD ++DF LS + L G ++A
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH-----SVSGLLGNFQWMA 194
Query: 186 PEIL-AKKGYDGAKVDMWSCGVVLFVLNAGYLPFND 220
PE + A++ K D +S ++L+ + G PF++
Sbjct: 195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HR+
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 340
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFS-IKS 397
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 398 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 443
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G V+ + +G +A K + + ++ + + RE+ ++ P IV Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 84 VLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG-VFHRDX 141
+ +I ME GG L + K GR EQ+ + +I + Y + + HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDM 201
+ DFG+S Q+ D M ++ GT +Y++PE L Y + D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 202 WSCGVVLFVLNAGYLPFNDPN 222
WS G+ L + G P P+
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPD 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 9/201 (4%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G V+ + +G +A K + + ++ + + RE+ ++ P IV Y
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 84 VLATKAKIYFVMEFAKGGELFAKISK-GRFSEQLSRRYFQQLISAVEYCHSRG-VFHRDX 141
+ +I ME GG L + K GR EQ+ + +I + Y + + HRD
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV 131
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDM 201
+ DFG+S Q+ D M ++ GT +Y++PE L Y + D+
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSG---QLI-DSMANSFVGTRSYMSPERLQGTHYS-VQSDI 186
Query: 202 WSCGVVLFVLNAGYLPFNDPN 222
WS G+ L + G P P+
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPD 207
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 75
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + R +Y Q+ +EY +
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 196 KFSVAS-DVWSFGVVLYEL 213
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME +++ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
M+ T Y APE++ GY VD+WS G ++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIM 215
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 30/260 (11%)
Query: 55 LRGGLTAHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKG-RFS 113
++ + + RE+ ++ P IV Y + +I ME GG L + + R
Sbjct: 53 IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIP 112
Query: 114 EQLSRRYFQQLISAVEYCHSR-GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG 172
E++ + ++ + Y + + HRD + DFG+S Q+ D
Sbjct: 113 EEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG---QLI-DS 168
Query: 173 MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN---LMAMY-R 228
M ++ GT +Y+APE L Y + D+WS G+ L L G P P+ L A++ R
Sbjct: 169 MANSFVGTRSYMAPERLQGTHYS-VQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGR 227
Query: 229 KIYKGEYRCPKWTSPDLKWFI----GRLLDTDPATRI--TVDEILRDP-------WFKKD 275
+ GE P SP + G +D+ PA I +D I+ +P F D
Sbjct: 228 PVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPD 287
Query: 276 YKE------RKFPHEDFDLK 289
++E K P E DLK
Sbjct: 288 FQEFVNKCLIKNPAERADLK 307
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH-VKREISIMSRLRHPNIVKLY 82
IG G F V+ G + + VAIK + + G ++ E +M +L HP +V+LY
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-VAIKTIRE-----GAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V +A I V EF + G L + + +G F+ + + + Y V HRD
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRD 128
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYDGA 197
+SDFG++ + D + GT + +PE+ + Y +
Sbjct: 129 LAARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-S 183
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRC--PKWTSPDLKWFIGRLLD 254
K D+WS GV+++ V + G +P+ + + + I G +R P+ S + +
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWK 242
Query: 255 TDPATRITVDEILRD 269
P R +LR
Sbjct: 243 ERPEDRPAFSRLLRQ 257
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 101/234 (43%), Gaps = 21/234 (8%)
Query: 24 IGCGAFAKVYHG--RNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+GCG F V G R + VAIK V KQ + T + RE IM +L +P IV+L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIK-VLKQGTEKAD-TEEMMREAQIMHQLDNPYIVRL 75
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSR--RYFQQLISAVEYCHSRGVFHR 139
V +A + VME A GG L + R +S Q+ ++Y + HR
Sbjct: 76 IGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 134
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP----AYVAPEILAKKGYD 195
D ISDFGLS + + D +T + APE + + +
Sbjct: 135 DLAARNVLLVNRHYAKISDFGLS---KALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 196 GAKVDMWSCGVVLF-VLNAGYLPFND---PNLMAMYRKIYKGEYRCPKWTSPDL 245
++ D+WS GV ++ L+ G P+ P +MA + + E CP P+L
Sbjct: 192 -SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME--CPPECPPEL 242
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 25/217 (11%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 9 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 61
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 62 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDH 119
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 173
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
M+ T Y APE++ GY VD+WS G ++
Sbjct: 174 FMMTPYVVTRYYRAPEVILGMGYK-ENVDLWSVGCIM 209
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 25/217 (11%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
M+ T Y APE++ GY VD+WS G ++
Sbjct: 180 FMMEPEVVTRYYRAPEVILGMGYK-ENVDLWSVGCIM 215
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 19/254 (7%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
IG G F V+ G + + VAIK + + + E +M +L HP +V+LY
Sbjct: 35 IGSGQFGLVHLGYWLNKDK-VAIKTIKEGSMSEDDFI----EEAEVMMKLSHPKLVQLYG 89
Query: 84 VLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRDX 141
V +A I V EF + G L + + +G F+ + + + Y V HRD
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 149
Query: 142 XXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYDGAK 198
+SDFG++ + D + GT + +PE+ + Y +K
Sbjct: 150 AARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SK 204
Query: 199 VDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRC--PKWTSPDLKWFIGRLLDT 255
D+WS GV+++ V + G +P+ + + + I G +R P+ S + +
Sbjct: 205 SDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWKE 263
Query: 256 DPATRITVDEILRD 269
P R +LR
Sbjct: 264 RPEDRPAFSRLLRQ 277
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 19/227 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLYE 83
+G G + +VY G + +VA+K + + + +E ++M ++HPN+V+L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 84 VLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRYF-QQLISAVEYCHSRGVFHRD 140
V + Y + EF G L + + E + Y Q+ SA+EY + HR+
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 382
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP-AYVAPEILAKKGYDGAKV 199
++DFGLS + H P + APE LA + K
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFPIKWTAPESLAYNKFS-IKS 439
Query: 200 DMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR------CPK 239
D+W+ GV+L+ + G P+ +L +Y + K +YR CP+
Sbjct: 440 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCPE 485
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME +++ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
M+ T Y APE++ GY VD+WS G ++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIM 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 72
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HRD I DFGL+ V Q + + +P + APE L +
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 193 KFSVAS-DVWSFGVVLYEL 210
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 121/323 (37%), Gaps = 67/323 (20%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 17 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 69
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 70 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDH 127
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 128 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 181
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY 231
M+ T Y APE++ GY VD+WS G ++ + G + F + + + K+
Sbjct: 182 FMMVPFVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 240
Query: 232 KG-EYRCPKWTS-------------------------PDLKW----------------FI 249
+ CP++ PD+ + +
Sbjct: 241 EQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 300
Query: 250 GRLLDTDPATRITVDEILRDPWF 272
++L D + RI+VDE L+ P+
Sbjct: 301 SKMLVIDASKRISVDEALQHPYI 323
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH-VKREISIMSRLRHPNIVKLY 82
IG G F V+ G + + VAIK + + G ++ E +M +L HP +V+LY
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-VAIKTIRE-----GAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V +A I V EF + G L + + +G F+ + + + Y V HRD
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 128
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYDGA 197
+SDFG++ + D + GT + +PE+ + Y +
Sbjct: 129 LAARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-S 183
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRC--PKWTSPDLKWFIGRLLD 254
K D+WS GV+++ V + G +P+ + + + I G +R P+ S + +
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWK 242
Query: 255 TDPATRITVDEILRD 269
P R +LR
Sbjct: 243 ERPEDRPAFSRLLRQ 257
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 25/217 (11%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 20 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 72
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 73 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDH 130
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 131 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 184
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
M+ T Y APE++ GY VD+WS G ++
Sbjct: 185 FMMTPYVVTRYYRAPEVILGMGYK-ENVDLWSVGCIM 220
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 121/323 (37%), Gaps = 67/323 (20%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 16 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 68
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 69 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDH 126
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 180
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY 231
M+ T Y APE++ GY VD+WS G ++ + G + F + + + K+
Sbjct: 181 FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 239
Query: 232 KG-EYRCPKWTS-------------------------PDLKW----------------FI 249
+ CP++ PD+ + +
Sbjct: 240 EQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 299
Query: 250 GRLLDTDPATRITVDEILRDPWF 272
++L D + RI+VDE L+ P+
Sbjct: 300 SKMLVIDASKRISVDEALQHPYI 322
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH-VKREISIMSRLRHPNIVKLY 82
IG G F V+ G + + VAIK + + G ++ E +M +L HP +V+LY
Sbjct: 13 IGSGQFGLVHLGYWLNKDK-VAIKTIRE-----GAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V +A I V EF + G L + + +G F+ + + + Y V HRD
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 126
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYDGA 197
+SDFG++ + D + GT + +PE+ + Y +
Sbjct: 127 LAARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASPEVFSFSRY-SS 181
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRC--PKWTSPDLKWFIGRLLD 254
K D+WS GV+++ V + G +P+ + + + I G +R P+ S + +
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWK 240
Query: 255 TDPATRITVDEILRD 269
P R +LR
Sbjct: 241 ERPEDRPAFSRLLRQ 255
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 21/275 (7%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
N F +Y +++G G F +V + TG+ A K + K++I + A E I+ +
Sbjct: 184 NTFRQY---RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 73 LRHPNIVKLYEVLATKAKIYFVMEFAKGGEL---FAKISKGRFSEQLSRRYFQQLISAVE 129
+ +V L TK + V+ GG+L + + F E + Y ++ +E
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 130 YCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM-LHTLCGTPAYVAPEI 188
H + +RD ISD GL+ P+G + GT Y+APE+
Sbjct: 301 DLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV----PEGQTIKGRVGTVGYMAPEV 356
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWT----SPD 244
+ + Y + D W+ G +L+ + AG PF ++ + P+ SP
Sbjct: 357 VKNERYTFSP-DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQ 415
Query: 245 LKWFIGRLLDTDPATRI-----TVDEILRDPWFKK 274
+ +LL DPA R+ + E+ P FKK
Sbjct: 416 ARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 25/217 (11%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
M+ T Y APE++ GY VD+WS G ++
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIM 215
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 21/275 (7%)
Query: 13 NLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR 72
N F +Y +++G G F +V + TG+ A K + K++I + A E I+ +
Sbjct: 184 NTFRQY---RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 73 LRHPNIVKLYEVLATKAKIYFVMEFAKGGEL---FAKISKGRFSEQLSRRYFQQLISAVE 129
+ +V L TK + V+ GG+L + + F E + Y ++ +E
Sbjct: 241 VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 130 YCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM-LHTLCGTPAYVAPEI 188
H + +RD ISD GL+ P+G + GT Y+APE+
Sbjct: 301 DLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV----PEGQTIKGRVGTVGYMAPEV 356
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWT----SPD 244
+ + Y + D W+ G +L+ + AG PF ++ + P+ SP
Sbjct: 357 VKNERYTFSP-DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQ 415
Query: 245 LKWFIGRLLDTDPATRI-----TVDEILRDPWFKK 274
+ +LL DPA R+ + E+ P FKK
Sbjct: 416 ARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 121/323 (37%), Gaps = 67/323 (20%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIY 231
M+ T Y APE++ GY VD+WS G ++ + G + F + + + K+
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
Query: 232 KG-EYRCPKWTS-------------------------PDLKW----------------FI 249
+ CP++ PD+ + +
Sbjct: 239 EQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 250 GRLLDTDPATRITVDEILRDPWF 272
++L D + RI+VDE L+ P+
Sbjct: 299 SKMLVIDASKRISVDEALQHPYI 321
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 25/217 (11%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q++ +++ HS G+ HRD I DFGL+ R G
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTS 179
Query: 173 -MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
M+ T Y APE++ GY VD+WS G ++
Sbjct: 180 FMMEPEVVTRYYRAPEVILGMGYK-ENVDIWSVGCIM 215
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH-VKREISIMSRLRHPNIVKLY 82
IG G F V+ G + + VAIK + + G ++ E +M +L HP +V+LY
Sbjct: 18 IGSGQFGLVHLGYWLNKDK-VAIKTIRE-----GAMSEEDFIEEAEVMMKLSHPKLVQLY 71
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V +A I V EF + G L + + +G F+ + + + Y V HRD
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 131
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYDGA 197
+SDFG++ + D + GT + +PE+ + Y +
Sbjct: 132 LAARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-S 186
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRC--PKWTSPDLKWFIGRLLD 254
K D+WS GV+++ V + G +P+ + + + I G +R P+ S + +
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWR 245
Query: 255 TDPATRITVDEILRD 269
P R +LR
Sbjct: 246 ERPEDRPAFSRLLRQ 260
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH-VKREISIMSRLRHPNIVKLY 82
IG G F V+ G + + VAIK + + G ++ E +M +L HP +V+LY
Sbjct: 16 IGSGQFGLVHLGYWLNKDK-VAIKTIRE-----GAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHRD 140
V +A I V EF + G L + + +G F+ + + + Y V HRD
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRD 129
Query: 141 XXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYDGA 197
+SDFG++ + D + GT + +PE+ + Y +
Sbjct: 130 LAARNCLVGENQVIKVSDFGMT----RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-S 184
Query: 198 KVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRC--PKWTSPDLKWFIGRLLD 254
K D+WS GV+++ V + G +P+ + + + I G +R P+ S + +
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-FRLYKPRLASTHVYQIMNHCWR 243
Query: 255 TDPATRITVDEILRD 269
P R +LR
Sbjct: 244 ERPEDRPAFSRLLRQ 258
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 88/213 (41%), Gaps = 14/213 (6%)
Query: 21 GKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQ-KILRGGLTAHVKREISIMSRLRHPNIV 79
G G G F VY G T +VA+K ++ I L +EI + ++ +H N+V
Sbjct: 27 GNKXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLV 84
Query: 80 KLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLS----RRYFQQLISAVEYCHSRG 135
+L + + V + G L ++S + LS + Q + + + H
Sbjct: 85 ELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENH 144
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
HRD ISDFGL+ E+ + GT AY APE L +G
Sbjct: 145 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL--RGEI 202
Query: 196 GAKVDMWSCGVVLFVLNAGYLPFND----PNLM 224
K D++S GVVL + G LP D P L+
Sbjct: 203 TPKSDIYSFGVVLLEIITG-LPAVDEHREPQLL 234
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 119/320 (37%), Gaps = 61/320 (19%)
Query: 1 MGDNTGDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLT 60
+GD+T + +Y+ K IG GA V + ++VAIK +S+
Sbjct: 15 IGDST------FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHA 67
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAK------IYFVMEFAKGGELFAKISKGRFSE 114
RE+ +M + H NI+ L V + +Y VME ++ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDH 125
Query: 115 QLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGML 174
+ Q++ +++ HS G+ HRD I DFGL+ M+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMM 182
Query: 175 HTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKG- 233
T Y APE++ GY VD+WS G ++ + G + F + + + K+ +
Sbjct: 183 TPEVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 234 EYRCPKWTS-------------------------PDLKW----------------FIGRL 252
CP++ PD+ + + ++
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKM 301
Query: 253 LDTDPATRITVDEILRDPWF 272
L D + RI+VDE L+ P+
Sbjct: 302 LVIDASKRISVDEALQHPYI 321
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 44/252 (17%)
Query: 6 GDISREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTA-HVK 64
G I + V + YE+ +IG G++ VY + ++VAIK V+ ++ + +
Sbjct: 18 GAIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVN--RMFEDLIDCKRIL 75
Query: 65 REISIMSRLRHPNIVKLYEVLATK-----AKIYFVMEFAKGG--ELFAKISKGRFSEQLS 117
REI+I++RL+ I++L++++ + ++Y V+E A +LF + +EQ
Sbjct: 76 REITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFK--TPIFLTEQHV 133
Query: 118 RRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTL 177
+ L+ ++ H G+ HRD I DFGL+ I D +H +
Sbjct: 134 KTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLA---RTINSDKDIHIV 190
Query: 178 --------------------------CGTPAYVAPE-ILAKKGYDGAKVDMWSCGVVLF- 209
T Y APE IL ++ Y + +D+WS G +
Sbjct: 191 NDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNS-IDIWSTGCIFAE 249
Query: 210 VLNAGYLPFNDP 221
+LN N+P
Sbjct: 250 LLNMMKSHINNP 261
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 85/216 (39%), Gaps = 22/216 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YEV K+IG G F +V + + Q VA+K V +K EI I+ LR
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 77 ------NIVKLYEVLATKAKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYFQQLISAV 128
N++ + E + I E EL K FS L R++ ++ +
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 129 EYCHSRGVFHRDXXXXXXXXXXXXXXXIS--DFGLSAVKEQIRPDGMLHTLCGTPAYVAP 186
+ H + H D I DFG S + Q ++ + Y AP
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ-----RVYXXIQSRFYRAP 268
Query: 187 EILAKKGYDGAKVDMWSCGVVLFVLNAGY--LPFND 220
E++ Y G +DMWS G +L L GY LP D
Sbjct: 269 EVILGARY-GMPIDMWSLGCILAELLTGYPLLPGED 303
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 24 IGCGAFAKV----YHGRNVRTGQSVAIKAV--SKQKILRGGLTAHVKREISIMSRLRHPN 77
+G G F V Y TG+ VA+K + S ++ LR +REI I+ L+H N
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD-----FEREIEILKSLQHDN 73
Query: 78 IVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHS 133
IVK V A + + +ME+ G L + + K R +Y Q+ +EY +
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 134 RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAY-VAPEILAKK 192
+ HR+ I DFGL+ V Q + + +P + APE L +
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 193 GYDGAKVDMWSCGVVLFVL 211
+ A D+WS GVVL+ L
Sbjct: 194 KFSVAS-DVWSFGVVLYEL 211
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 45/229 (19%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGL----TAHVKREISIMSR 72
+YE+ +IG G++ V + + VAIK KILR + REI+I++R
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIK-----KILRVFEDLIDCKRILREIAILNR 108
Query: 73 LRHPNIVKLYEVLATKA-----KIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQQLI 125
L H ++VK+ +++ K ++Y V+E A F K+ + +E + L+
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTLLYNLL 166
Query: 126 SAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGL-----------SAVKEQIRPDGM- 173
V+Y HS G+ HRD + DFGL S + R D M
Sbjct: 167 VGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 174 ----LHT------LCG---TPAYVAPE-ILAKKGYDGAKVDMWSCGVVL 208
HT L G T Y APE IL ++ Y A +D+WS G +
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA-IDVWSIGCIF 274
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 16/203 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G F V +G+ R VAIK + + + K +M L H +V+L
Sbjct: 30 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 84
Query: 82 YEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
Y V + I+ + E+ G L + + + RF Q + + A+EY S+ HR
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D +SDFGLS E+ G + +P PE+L +
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP----PEVLMYSKF-S 199
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
+K D+W+ GV+++ + + G +P+
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G F V +G+ R VAIK + + + K +M L H +V+L
Sbjct: 15 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 69
Query: 82 YEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
Y V + I+ + E+ G L + + + RF Q + + A+EY S+ HR
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D +SDFGLS E G + +P PE+L +
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP----PEVLMYSKF-S 184
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
+K D+W+ GV+++ + + G +P+
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+IG G F KVY G +R G VA+K + + + EI +S RHP++V L
Sbjct: 46 LIGHGVFGKVYKGV-LRDGAKVALKRRTPES---SQGIEEFETEIETLSFCRHPHLVSLI 101
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQL------ISAVEYCHSRGV 136
+ ++ + ++ + G L + G +S + Q+L + Y H+R +
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHL-YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG+S ++ + + GT Y+ PE KG
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFI-KGRLT 219
Query: 197 AKVDMWSCGVVLF 209
K D++S GVVLF
Sbjct: 220 EKSDVYSFGVVLF 232
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 33/241 (13%)
Query: 10 REVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTA-HVKREIS 68
+ V++ Y + +IG G++ VY + T ++VAIK V+ ++ + + REI+
Sbjct: 20 KNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN--RMFEDLIDCKRILREIT 77
Query: 69 IMSRLRHPNIVKLYEVLATK-----AKIYFVMEFAKGG--ELFAKISKGRFSEQLSRRYF 121
I++RL+ I++LY+++ ++Y V+E A +LF + +E+ +
Sbjct: 78 ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK--TPIFLTEEHIKTIL 135
Query: 122 QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTL---- 177
L+ + H G+ HRD + DFGL+ + +++ L
Sbjct: 136 YNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENE 195
Query: 178 ----------------CGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFND 220
T Y APE++ + +D+WS G + +LN ND
Sbjct: 196 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIND 255
Query: 221 P 221
P
Sbjct: 256 P 256
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 101/234 (43%), Gaps = 21/234 (8%)
Query: 24 IGCGAFAKVYHG--RNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+GCG F V G R + VAIK V KQ + T + RE IM +L +P IV+L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIK-VLKQGTEKAD-TEEMMREAQIMHQLDNPYIVRL 401
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSR--RYFQQLISAVEYCHSRGVFHR 139
V +A + VME A GG L + R +S Q+ ++Y + HR
Sbjct: 402 IGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 460
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP----AYVAPEILAKKGYD 195
+ ISDFGLS + + D +T + APE + + +
Sbjct: 461 NLAARNVLLVNRHYAKISDFGLS---KALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 196 GAKVDMWSCGVVLF-VLNAGYLPFND---PNLMAMYRKIYKGEYRCPKWTSPDL 245
++ D+WS GV ++ L+ G P+ P +MA + + E CP P+L
Sbjct: 518 -SRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME--CPPECPPEL 568
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G F V +G+ R VAIK + + + K +M L H +V+L
Sbjct: 14 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 68
Query: 82 YEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
Y V + I+ + E+ G L + + + RF Q + + A+EY S+ HR
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 128
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D +SDFGLS E G + +P PE+L +
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLMYSKF-S 183
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
+K D+W+ GV+++ + + G +P+
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+IG G F KVY G +R G VA+K + + + EI +S RHP++V L
Sbjct: 46 LIGHGVFGKVYKGV-LRDGAKVALKRRTPES---SQGIEEFETEIETLSFCRHPHLVSLI 101
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQL------ISAVEYCHSRGV 136
+ ++ + ++ + G L + G +S + Q+L + Y H+R +
Sbjct: 102 GFCDERNEMILIYKYMENGNLKRHL-YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
HRD I+DFG+S ++ + + GT Y+ PE KG
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI-KGRLT 219
Query: 197 AKVDMWSCGVVLF 209
K D++S GVVLF
Sbjct: 220 EKSDVYSFGVVLF 232
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G F V +G+ R VAIK + + + K +M L H +V+L
Sbjct: 15 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 69
Query: 82 YEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
Y V + I+ + E+ G L + + + RF Q + + A+EY S+ HR
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D +SDFGLS E G + +P PE+L +
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLMYSKF-S 184
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
+K D+W+ GV+++ + + G +P+
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G F V +G+ R VAIK + + + K +M L H +V+L
Sbjct: 10 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 64
Query: 82 YEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
Y V + I+ + E+ G L + + + RF Q + + A+EY S+ HR
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 124
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D +SDFGLS E G + +P PE+L +
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLMYSKF-S 179
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
+K D+W+ GV+++ + + G +P+
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G F V +G+ R VAIK + + + K +M L H +V+L
Sbjct: 21 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 75
Query: 82 YEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
Y V + I+ + E+ G L + + + RF Q + + A+EY S+ HR
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 135
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D +SDFGLS E G + +P PE+L +
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLMYSKF-S 190
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
+K D+W+ GV+++ + + G +P+
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 16/203 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G F V +G+ R VAIK + + + K +M L H +V+L
Sbjct: 30 KELGTGQFGVVKYGK-WRGQYDVAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 84
Query: 82 YEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
Y V + I+ + E+ G L + + + RF Q + + A+EY S+ HR
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D +SDFGLS E G + +P PE+L +
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSP----PEVLMYSKF-S 199
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
+K D+W+ GV+++ + + G +P+
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 19/225 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G F +V+ VA+K + + A E ++M L+H +VKL
Sbjct: 21 KKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLA----EANVMKTLQHDKLVKL 75
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR---YFQQLISAVEYCHSRGVFH 138
+ V+ TK IY + EF G L + S+Q + + Q+ + + R H
Sbjct: 76 HAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 134
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
RD I+DFGL+ V E +G + + APE + G
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI----KWTAPEAI-NFGSF 189
Query: 196 GAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
K D+WS G++L ++ G +P+ + + R + +G YR P+
Sbjct: 190 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPR 233
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 19/225 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G F +V+ VA+K + + A E ++M L+H +VKL
Sbjct: 194 KKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLA----EANVMKTLQHDKLVKL 248
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR---YFQQLISAVEYCHSRGVFH 138
+ V+ TK IY + EF G L + S+Q + + Q+ + + R H
Sbjct: 249 HAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 307
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYD 195
RD I+DFGL+ V E +G + + APE + G
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI----KWTAPEAI-NFGSF 362
Query: 196 GAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
K D+WS G++L ++ G +P+ + + R + +G YR P+
Sbjct: 363 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPR 406
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 117/307 (38%), Gaps = 54/307 (17%)
Query: 16 GKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQ-------KILRGG-LTAHVKREI 67
Y V + I G++ V G + G VAIK V IL L V REI
Sbjct: 22 SPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80
Query: 68 SIMSRLRHPNIVKLYEVLA-----TKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRY 120
+++ HPNI+ L ++ K+Y V E + +L I R S Q + +
Sbjct: 81 RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYF 139
Query: 121 FQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGT 180
++ + H GV HRD I DF L+ +E H +
Sbjct: 140 MYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA--REDTADANKTHYVTHR 197
Query: 181 PAYVAPEILAK-KGYDGAKVDMWSCGVVLF------VLNAGYLPFNDPNLM--------- 224
Y APE++ + KG+ VDMWS G V+ L G +N N +
Sbjct: 198 -WYRAPELVMQFKGFTKL-VDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 225 ---AMYRKIYKGEY------RCP--KWTS------PDLKWFIGRLLDTDPATRITVDEIL 267
M+ +Y P WT+ P I ++L+ +P RI+ ++ L
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL 315
Query: 268 RDPWFKK 274
R P+F+
Sbjct: 316 RHPYFES 322
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 28/216 (12%)
Query: 13 NLFGKYEVGKI--IGCGAFAKV----YHGRNVRTGQSVAIKAVSKQ--KILRGGLTAHVK 64
+F K + KI +G G F KV Y N TG+ VA+KA+ R G K
Sbjct: 26 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGW----K 81
Query: 65 REISIMSRLRHPNIVKLYEVL--ATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQ 122
+EI I+ L H +I+K A A + VME+ G L + + + Q
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ 141
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKE-----QIRPDGMLHT 176
Q+ + Y H++ HRD I DFGL+ AV E ++R DG
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDG---- 197
Query: 177 LCGTPAY-VAPEILAKKGYDGAKVDMWSCGVVLFVL 211
+P + APE L + + A D+WS GV L+ L
Sbjct: 198 --DSPVFWYAPECLKEYKFYYAS-DVWSFGVTLYEL 230
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 117/305 (38%), Gaps = 54/305 (17%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQ-------KILRGG-LTAHVKREISI 69
Y V + I G++ V G + G VAIK V IL L V REI +
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 70 MSRLRHPNIVKLYEVLA-----TKAKIYFVMEFAKGGELFAKISKGR--FSEQLSRRYFQ 122
++ HPNI+ L ++ K+Y V E + +L I R S Q + +
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMY 141
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
++ + H GV HRD I DF L+ +E H +
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA--REDTADANKTHYVTHR-W 198
Query: 183 YVAPEILAK-KGYDGAKVDMWSCGVVLF------VLNAGYLPFNDPNLM----------- 224
Y APE++ + KG+ VDMWS G V+ L G +N N +
Sbjct: 199 YRAPELVMQFKGFTKL-VDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257
Query: 225 -AMYRKIYKGEY------RCP--KWTS------PDLKWFIGRLLDTDPATRITVDEILRD 269
M+ +Y P WT+ P I ++L+ +P RI+ ++ LR
Sbjct: 258 VVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317
Query: 270 PWFKK 274
P+F+
Sbjct: 318 PYFES 322
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
K +G G F +V+ VA+K + + A E ++M L+H +VKL
Sbjct: 188 KKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGSMSVEAFLA----EANVMKTLQHDKLVKL 242
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR---YFQQLISAVEYCHSRGVFH 138
+ V+ TK IY + EF G L + S+Q + + Q+ + + R H
Sbjct: 243 HAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 301
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAK 198
RD I+DFGL+ V + + APE + G K
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARVGAKF-----------PIKWTAPEAI-NFGSFTIK 349
Query: 199 VDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
D+WS G++L ++ G +P+ + + R + +G YR P+
Sbjct: 350 SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPR 390
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 134/331 (40%), Gaps = 72/331 (21%)
Query: 10 REVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISI 69
R +LF +YE G +G G + VY + K + ++I G++ REI++
Sbjct: 17 RVEDLF-EYE-GCKVGRGTYGHVY---KAKRKDGKDDKDYALKQIEGTGISMSACREIAL 71
Query: 70 MSRLRHPNIVKLYEVLATKA--KIYFVMEFAKGGELFAKISKGRFSE------QLSR--- 118
+ L+HPN++ L +V + A K++ + ++A+ +L+ I R S+ QL R
Sbjct: 72 LRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMV 130
Query: 119 -RYFQQLISAVEYCHSRGVFHRDXXXXXXXXX----XXXXXXISDFGLSAV-KEQIRPDG 172
Q++ + Y H+ V HRD I+D G + + ++P
Sbjct: 131 KSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA 190
Query: 173 MLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF----------------------- 209
L + T Y APE+L + +D+W+ G +
Sbjct: 191 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250
Query: 210 ------VLNAGYLP----FNDPNLMAMYRKIYKGEYRCPKWTS-------------PDLK 246
+ N P + D M + + K ++R +T+ PD K
Sbjct: 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMK-DFRRNTYTNCSLIKYMEKHKVKPDSK 309
Query: 247 WF--IGRLLDTDPATRITVDEILRDPWFKKD 275
F + +LL DP RIT ++ ++DP+F +D
Sbjct: 310 AFHLLQKLLTMDPIKRITSEQAMQDPYFLED 340
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 14/198 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVK--REISIMSRLRHPNIV 79
K++G GAF VY G V G++V I K G A+V+ E IM+ + HP++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 80 KLYEVLATKAKIYFVMEFAKGGELFAKI--SKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
+L V + I V + G L + K QL + Q+ + Y R +
Sbjct: 81 RLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 139
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKE----QIRPDGMLHTLCGTPAYVAPEILAKKG 193
HRD I+DFGL+ + E + DG + ++A E + +
Sbjct: 140 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI----KWMALECIHYRK 195
Query: 194 YDGAKVDMWSCGVVLFVL 211
+ + D+WS GV ++ L
Sbjct: 196 FT-HQSDVWSYGVTIWEL 212
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 96/223 (43%), Gaps = 28/223 (12%)
Query: 6 GDISREVNLFGKYEVGKI--IGCGAFAKV----YHGRNVRTGQSVAIKAVSKQ--KILRG 57
G + + +F K + KI +G G F KV Y N TG+ VA+KA+ R
Sbjct: 2 GSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS 61
Query: 58 GLTAHVKREISIMSRLRHPNIVKLYEVLATKAK--IYFVMEFAKGGELFAKISKGRFSEQ 115
G K+EI I+ L H +I+K + + + VME+ G L + +
Sbjct: 62 GW----KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLA 117
Query: 116 LSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKE-----QIR 169
+ QQ+ + Y HS+ HR+ I DFGL+ AV E ++R
Sbjct: 118 QLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 170 PDGMLHTLCGTPAY-VAPEILAKKGYDGAKVDMWSCGVVLFVL 211
DG +P + APE L + + A D+WS GV L+ L
Sbjct: 178 EDG------DSPVFWYAPECLKEYKFYYAS-DVWSFGVTLYEL 213
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 14/198 (7%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVK--REISIMSRLRHPNIV 79
K++G GAF VY G V G++V I K G A+V+ E IM+ + HP++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 80 KLYEVLATKAKIYFVMEFAKGGELFAKI--SKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
+L V + I V + G L + K QL + Q+ + Y R +
Sbjct: 104 RLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 162
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKE----QIRPDGMLHTLCGTPAYVAPEILAKKG 193
HRD I+DFGL+ + E + DG + ++A E + +
Sbjct: 163 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI----KWMALECIHYRK 218
Query: 194 YDGAKVDMWSCGVVLFVL 211
+ + D+WS GV ++ L
Sbjct: 219 FT-HQSDVWSYGVTIWEL 235
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 20/259 (7%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQ-----SVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
+ +I+G G F +VY G V T +VA+K K L E IM L
Sbjct: 12 LNRILGEGFFGEVYEG--VYTNHKGEKINVAVKTCKKDCTLDN--KEKFMSEAVIMKNLD 67
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCH 132
HP+IVKL ++ + + +ME GEL + + + S ++ Y Q+ A+ Y
Sbjct: 68 HPHIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 126
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA-YVAPEILAK 191
S HRD + DFGLS E D ++ P +++PE +
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED--EDYYKASVTRLPIKWMSPESINF 184
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK--WTSPDLKWF 248
+ + A D+W V ++ +L+ G PF + + KG+ R PK P L
Sbjct: 185 RRFTTAS-DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDLCPPVLYTL 242
Query: 249 IGRLLDTDPATRITVDEIL 267
+ R D DP+ R E++
Sbjct: 243 MTRCWDYDPSDRPRFTELV 261
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 20/259 (7%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQ-----SVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
+ +I+G G F +VY G V T +VA+K K L E IM L
Sbjct: 16 LNRILGEGFFGEVYEG--VYTNHKGEKINVAVKTCKKDCTLDN--KEKFMSEAVIMKNLD 71
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCH 132
HP+IVKL ++ + + +ME GEL + + + S ++ Y Q+ A+ Y
Sbjct: 72 HPHIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 130
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA-YVAPEILAK 191
S HRD + DFGLS E D ++ P +++PE +
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED--EDYYKASVTRLPIKWMSPESINF 188
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK--WTSPDLKWF 248
+ + A D+W V ++ +L+ G PF + + KG+ R PK P L
Sbjct: 189 RRFTTAS-DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDLCPPVLYTL 246
Query: 249 IGRLLDTDPATRITVDEIL 267
+ R D DP+ R E++
Sbjct: 247 MTRCWDYDPSDRPRFTELV 265
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 20/259 (7%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQ-----SVAIKAVSKQKILRGGLTAHVKREISIMSRLR 74
+ +I+G G F +VY G V T +VA+K K L E IM L
Sbjct: 28 LNRILGEGFFGEVYEG--VYTNHKGEKINVAVKTCKKDCTLDN--KEKFMSEAVIMKNLD 83
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCH 132
HP+IVKL ++ + + +ME GEL + + + S ++ Y Q+ A+ Y
Sbjct: 84 HPHIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 142
Query: 133 SRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA-YVAPEILAK 191
S HRD + DFGLS E D ++ P +++PE +
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED--EDYYKASVTRLPIKWMSPESINF 200
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK--WTSPDLKWF 248
+ + A D+W V ++ +L+ G PF + + KG+ R PK P L
Sbjct: 201 RRFTTAS-DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKPDLCPPVLYTL 258
Query: 249 IGRLLDTDPATRITVDEIL 267
+ R D DP+ R E++
Sbjct: 259 MTRCWDYDPSDRPRFTELV 277
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 35/240 (14%)
Query: 64 KREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFA------KGGELFAKISKGR---FSE 114
K E+ I++ +++ + ++ ++Y + E+ K E F + K
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 115 QLSRRYFQQLISAVEYCHS-RGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
Q+ + + ++++ Y H+ + + HRD +SDFG S + D
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGES----EYMVDKK 206
Query: 174 LHTLCGTPAYVAPEILAKKG-YDGAKVDMWSCGVVLFVLNAGYLPFN-DPNLMAMYRKIY 231
+ GT ++ PE + + Y+GAKVD+WS G+ L+V+ +PF+ +L+ ++ I
Sbjct: 207 IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIR 266
Query: 232 KGEYRCP-------------------KWTSPDLKWFIGRLLDTDPATRITVDEILRDPWF 272
P + S + F+ L +PA RIT ++ L+ W
Sbjct: 267 TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 120/298 (40%), Gaps = 53/298 (17%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISI-----MSRLRHPNI 78
+G GA+ V R+V +GQ +A+K + R + + ++ + + M + P
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI------RATVNSQEQKRLLMDLDISMRTVDCPFT 112
Query: 79 VKLYEVLATKAKIYFVMEFAKGG-ELFAK--ISKGR-FSEQLSRRYFQQLISAVEYCHSR 134
V Y L + ++ ME + F K I KG+ E + + ++ A+E+ HS+
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 135 -GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTL-CGTPAYVAPE----I 188
V HRD + DFG+S D + T+ G Y+APE
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLV----DSVAKTIDAGCKPYMAPERINPE 228
Query: 189 LAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSP--DLK 246
L +KGY K D+WS G+ + L P++ W +P LK
Sbjct: 229 LNQKGY-SVKSDIWSLGITMIELAILRFPYDS-------------------WGTPFQQLK 268
Query: 247 WFIGRLLDTDPATRITVDEI-LRDPWFKKDYKER-KFP----HEDFDLKDSVGCNVGS 298
+ PA + + + + KK+ KER +P H F L +S G +V S
Sbjct: 269 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVAS 326
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 13 NLFGKYEVGKI--IGCGAFAKV----YHGRNVRTGQSVAIKAVSKQ--KILRGGLTAHVK 64
+F K + KI +G G F KV Y N TG+ VA+KA+ + LR G +
Sbjct: 3 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGW----Q 58
Query: 65 REISIMSRLRHPNIVKLYEVLATKAK--IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQ 122
REI I+ L H +IVK + + + VME+ G L + + + Q
Sbjct: 59 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQ 118
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKE-----QIRPDGMLHT 176
Q+ + Y H++ HR I DFGL+ AV E ++R DG
Sbjct: 119 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG---- 174
Query: 177 LCGTPAY-VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN 222
+P + APE L + + A D+WS GV L+ L L + D N
Sbjct: 175 --DSPVFWYAPECLKECKFYYAS-DVWSFGVTLYEL----LTYCDSN 214
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 13 NLFGKYEVGKI--IGCGAFAKV----YHGRNVRTGQSVAIKAVSKQ--KILRGGLTAHVK 64
+F K + KI +G G F KV Y N TG+ VA+KA+ + LR G +
Sbjct: 4 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGW----Q 59
Query: 65 REISIMSRLRHPNIVKLYEVLATKAK--IYFVMEFAKGGELFAKISKGRFSEQLSRRYFQ 122
REI I+ L H +IVK + + + VME+ G L + + + Q
Sbjct: 60 REIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQ 119
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKE-----QIRPDGMLHT 176
Q+ + Y H++ HR I DFGL+ AV E ++R DG
Sbjct: 120 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG---- 175
Query: 177 LCGTPAY-VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPN 222
+P + APE L + + A D+WS GV L+ L L + D N
Sbjct: 176 --DSPVFWYAPECLKECKFYYAS-DVWSFGVTLYEL----LTYCDSN 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 96/223 (43%), Gaps = 28/223 (12%)
Query: 6 GDISREVNLFGKYEVGKI--IGCGAFAKV----YHGRNVRTGQSVAIKAVSKQ--KILRG 57
G + + +F K + KI +G G F KV Y N TG+ VA+KA+ R
Sbjct: 2 GSPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS 61
Query: 58 GLTAHVKREISIMSRLRHPNIVKLYEVLATKAK--IYFVMEFAKGGELFAKISKGRFSEQ 115
G K+EI I+ L H +I+K + + + VME+ G L + +
Sbjct: 62 GW----KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLA 117
Query: 116 LSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS-AVKE-----QIR 169
+ QQ+ + Y H++ HR+ I DFGL+ AV E ++R
Sbjct: 118 QLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 170 PDGMLHTLCGTPAY-VAPEILAKKGYDGAKVDMWSCGVVLFVL 211
DG +P + APE L + + A D+WS GV L+ L
Sbjct: 178 EDG------DSPVFWYAPECLKEYKFYYAS-DVWSFGVTLYEL 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 20/226 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVK 80
K +G G F +V+ G VA+K + G ++ E ++M L+H +V+
Sbjct: 19 KRLGAGQFGEVWMGY-YNNSTKVAVKTLKP-----GTMSVQAFLEEANLMKTLQHDKLVR 72
Query: 81 LYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR---YFQQLISAVEYCHSRGVF 137
LY V+ + IY + E+ G L + + L + + Q+ + Y +
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 132
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
HRD I+DFGL+ V E +G + + APE + G
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI----KWTAPEAI-NFGC 187
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
K D+WS G++L+ ++ G +P+ + + +G YR P+
Sbjct: 188 FTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQG-YRMPR 232
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQS-VAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G G + VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 23 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 76
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 77 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 135
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D I+DFGL+ + E +G + + APE + G
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAI-NYGTFT 190
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 191 IKSDVWSFGILLTEIVTHGRIPY 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGR-NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G N T VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 74
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D I+DFGL+ + E +G + + APE + G
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAI-NYGTFT 188
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGR-NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G N T VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 29 LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 82
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 83 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 141
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D I+DFGL+ + E +G + + APE + G
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAI-NYGTFT 196
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 197 IKSDVWSFGILLTEIVTHGRIPY 219
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGR-NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G N T VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 27 LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 80
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 81 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D I+DFGL+ + E +G + + APE + G
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAI-NYGTFT 194
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGR-NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G N T VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 30 LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 83
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 84 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 142
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D I+DFGL+ + E +G + + APE + G
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAI-NYGTFT 197
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 198 IKSDVWSFGILLTEIVTHGRIPY 220
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQS-VAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G G + VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 74
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D I+DFGL+ + E +G + + APE + G
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAI-NYGTFT 188
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQS-VAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G G + VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 22 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 75
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 76 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 134
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D I+DFGL+ + E +G + + APE + G
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI----KWTAPEAI-NYGTFT 189
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 190 IKSDVWSFGILLTEIVTHGRIPY 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 20/226 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVK 80
K +G G F +V+ G VA+K + G ++ E ++M L+H +V+
Sbjct: 18 KKLGAGQFGEVWMGY-YNNSTKVAVKTLKP-----GTMSVQAFLEEANLMKTLQHDKLVR 71
Query: 81 LYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR---YFQQLISAVEYCHSRGVF 137
LY V+ + IY + EF G L + + L + + Q+ + Y +
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 131
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
HRD I+DFGL+ V E +G + + APE + G
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI----KWTAPEAI-NFGC 186
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
K ++WS G++L+ ++ G +P+ + + +G YR P+
Sbjct: 187 FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQG-YRMPR 231
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQS-VAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G G + VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 27 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 80
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 81 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYDG 196
D I+DFGL+ + E D G + APE + G
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIE----DNEYTAREGAKFPIKWTAPEAI-NYGTFT 194
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 195 IKSDVWSFGILLTEIVTHGRIPY 217
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQS-VAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G G + VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 26 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 79
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 80 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 138
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYDG 196
D I+DFGL+ + E D G + APE + G
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIE----DNEYTAREGAKFPIKWTAPEAI-NYGTFT 193
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 194 IKSDVWSFGILLTEIVTHGRIPY 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 118/297 (39%), Gaps = 51/297 (17%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISI-----MSRLRHPNI 78
+G GA+ V R+V +GQ +A+K + R + + ++ + + M + P
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI------RATVNSQEQKRLLMDLDISMRTVDCPFT 68
Query: 79 VKLYEVLATKAKIYFVMEFAKGG-ELFAK--ISKGR-FSEQLSRRYFQQLISAVEYCHSR 134
V Y L + ++ ME + F K I KG+ E + + ++ A+E+ HS+
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 135 -GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE----IL 189
V HRD + DFG+S + D G Y+APE L
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGY---LVDDVAKDIDAGCKPYMAPERINPEL 185
Query: 190 AKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSP--DLKW 247
+KGY K D+WS G+ + L P++ W +P LK
Sbjct: 186 NQKGY-SVKSDIWSLGITMIELAILRFPYD-------------------SWGTPFQQLKQ 225
Query: 248 FIGRLLDTDPATRITVDEI-LRDPWFKKDYKER-KFP----HEDFDLKDSVGCNVGS 298
+ PA + + + + KK+ KER +P H F L +S G +V S
Sbjct: 226 VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVAS 282
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 31/217 (14%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIM---SRL 73
+++V ++ G G F V G+ TG SVAIK V + R RE+ IM + L
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRN-------RELQIMQDLAVL 76
Query: 74 RHPNIVKLYEVLAT-----KAKIYF--VMEFAKGGELFAKISKGRFSEQLS------RRY 120
HPNIV+L T + IY VME+ + + + + Q++ + +
Sbjct: 77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAPPPILIKVF 134
Query: 121 FQQLISAVEYCH--SRGVFHRDXXXXXXXXXXXX-XXXISDFGLSAVKEQIRPDGMLHTL 177
QLI ++ H S V HRD + DFG + P+ + +
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN--VAYI 192
Query: 178 CGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAG 214
C Y APE++ + VD+WS G + + G
Sbjct: 193 CSR-YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQS-VAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G G + VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 74
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D I+DFGL+ + E +G + + APE + G
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI----KWTAPEAI-NYGTFT 188
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGR-NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G N T VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 31 LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 84
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 85 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 143
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYDG 196
D I+DFGL+ + E D G + APE + G
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIE----DNEYTAREGAKFPIKWTAPEAI-NYGTFT 198
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 199 IKSDVWSFGILLTEIVTHGRIPY 221
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 25/222 (11%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQS---VAIKAVSKQKILRGGLTAHVKREISIMSRL 73
++ +G+++G G F V + + S VA+K + K I+ RE + M
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMKEF 82
Query: 74 RHPNIVKLYEV-LATKAK-----IYFVMEFAKGGELFAKISKGRFSE-------QLSRRY 120
HP++ KL V L ++AK ++ F K G+L A + R E Q R+
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 121 FQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGT 180
+ +EY SR HRD ++DFGLS +I C +
Sbjct: 143 MVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS---RKIYSGDYYRQGCAS 199
Query: 181 PA---YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
++A E LA Y D+W+ GV ++ ++ G P+
Sbjct: 200 KLPVKWLALESLADNLYT-VHSDVWAFGVTMWEIMTRGQTPY 240
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 37/278 (13%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR---- 74
+ GK +G GAF KV G+ A+ V+ K+L+ TAH + ++MS L+
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKS--TAHADEKEALMSELKIMSH 105
Query: 75 ---HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FS--------EQLSR 118
H NIV L + + E+ G+L + + R +S EQLS
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 119 R----YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
R + Q+ + + S+ HRD I DFGL+ I D
Sbjct: 166 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RDIMNDSNY 222
Query: 173 MLHTLCGTPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
++ P ++APE + Y + D+WS G++L+ + + G P+ + + + K+
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 281
Query: 231 YKGEYRC--PKWTSPDLKWFIGRLLDTDPATRITVDEI 266
K Y+ P + ++ + +P R T +I
Sbjct: 282 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 119/297 (40%), Gaps = 49/297 (16%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV + +G G +++V+ G NV + IK + K + + + + PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK-----KKIKREIKILQNLMGGPN 87
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
IVKL +++ + + F K+ ++ R Y +L+ A++YCHS+G+
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 138 HRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAK-KGYD 195
HRD + D+GL+ E P + + + PE+L + YD
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMAMYR-------KIYKGEYRC---PK- 239
+ +DMWS G + + PF N L+ + + +Y +YR P+
Sbjct: 205 YS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 240 -----------W-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
W SP+ F+ +LL D R+T E + P+F++
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQS-VAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G G + VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 16 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 69
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 70 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 128
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
D I+DFGL+ + E +G + + APE + G
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI----KWTAPEAI-NYGTFT 183
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 184 IKSDVWSFGILLTEIVTHGRIPY 206
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 23/256 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQS---VAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
++IG G F VYHG + Q+ AIK++S +I RE +M L HPN+
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLS--RITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 79 VKLYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSR--RYFQQLISAVEYCHSRG 135
+ L + L + + ++ + G+L I + + + + Q+ +EY +
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSA-VKEQIRPDGMLHTLCGTPA-YVAPEILAKKG 193
HRD ++DFGL+ + ++ H P + A E L
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 194 YDGAKVDMWSCGVVLF-VLNAGYLPFN--DP----NLMAMYRKIYKGEYRCPKWTSPDLK 246
+ K D+WS GV+L+ +L G P+ DP + +A R++ + EY CP L
Sbjct: 205 FT-TKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEY-CPD----SLY 258
Query: 247 WFIGRLLDTDPATRIT 262
+ + + DPA R T
Sbjct: 259 QVMQQCWEADPAVRPT 274
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 32/278 (11%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ ++GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVA-VKMLKEGATHSEHR--ALMSELKIL 86
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGEL--FAKISKGRF----SEQLSRRYFQ 122
H N+V L + ++EF K G L + + + F E L + +
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLT 146
Query: 123 ---------QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
Q+ +E+ SR HRD I DFGL+ + PD +
Sbjct: 147 LEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXK-DPDXV 205
Query: 174 LHTLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-RKI 230
P ++APE + + Y + D+WS GV+L+ + + G P+ + + R++
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 231 YKG-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
+G R P +T+P++ + +P+ R T E++
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
I+G G F KVY GR + G VA+K + +++ G L + E+ ++S H N+++L
Sbjct: 45 ILGRGGFGKVYKGR-LADGTLVAVKRLKEERXQGGEL--QFQTEVEMISMAVHRNLLRLR 101
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSE---QLSRRYFQQLISA--VEYCHSR--- 134
T + V + G + + + + S+ +R L SA + Y H
Sbjct: 102 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP 161
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
+ HRD + DFGL+ + + + + + GT ++APE L+ G
Sbjct: 162 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDXHVXXAVRGTIGHIAPEYLS-TGK 219
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPF------NDPNLMAM 226
K D++ GV+L L G F ND ++M +
Sbjct: 220 SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 116/279 (41%), Gaps = 33/279 (11%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ +GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 29 RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHR--ALMSELKIL 85
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGELFAKISKGR-------FSEQLSRRYF 121
H N+V L + ++EF K G L + R E L + +
Sbjct: 86 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFL 145
Query: 122 Q---------QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG 172
Q+ +E+ SR HRD I DFGL+ + PD
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK-DPDX 204
Query: 173 MLHTLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-RK 229
+ P ++APE + + Y + D+WS GV+L+ + + G P+ + + R+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 263
Query: 230 IYKG-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
+ +G R P +T+P++ + +P+ R T E++
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 34/280 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ ++GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHR--ALMSELKIL 84
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGELFAKISKGR--------FSEQLSRRY 120
H N+V L + ++EF K G L + R E L + +
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 121 FQ---------QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
Q+ +E+ SR HRD I DFGL+ + PD
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK-DPD 203
Query: 172 GMLHTLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-R 228
+ P ++APE + + Y + D+WS GV+L+ + + G P+ + + R
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 229 KIYKG-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
++ +G R P +T+P++ + +P+ R T E++
Sbjct: 263 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 79
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + +M+ G L + + K Q + Q+ + Y R
Sbjct: 80 VCRLLGICLT-STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 194
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 195 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 241
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 103/262 (39%), Gaps = 23/262 (8%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKR---EISIMSRLRHP 76
+GKI+G G F V G N++ ++K K L ++ E + M HP
Sbjct: 38 LGKILGEGEFGSVMEG-NLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHP 96
Query: 77 NIVKLYEVLATKA-----KIYFVMEFAKGGELFAKISKGRFSE-------QLSRRYFQQL 124
N+++L V + K ++ F K G+L + R Q ++ +
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 125 ISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLH-TLCGTPA- 182
+EY +R HRD ++DFGLS K+ D + P
Sbjct: 157 ALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS--KKIYSGDYYRQGRIAKMPVK 214
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGE-YRCPKW 240
++A E LA + Y +K D+W+ GV ++ + G P+ MY + G + P+
Sbjct: 215 WIAIESLADRVYT-SKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPED 273
Query: 241 TSPDLKWFIGRLLDTDPATRIT 262
+L + TDP R T
Sbjct: 274 CLDELYEIMYSCWRTDPLDRPT 295
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 49/297 (16%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV + +G G +++V+ G NV + IK + K + + + PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK-----KKIKREIKILQNLXGGPN 87
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
IVKL +++ + + F K+ ++ R Y +L+ A++YCHS+G+
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 138 HRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAK-KGYD 195
HRD + D+GL+ E P + + + PE+L + YD
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMAMYR-------KIYKGEYRC---PK- 239
+ +DMWS G + + PF N L+ + + +Y +YR P+
Sbjct: 205 YS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 240 -----------W-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
W SP+ F+ +LL D R+T E + P+F++
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 110/265 (41%), Gaps = 26/265 (9%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH-VKREISIMSRLRHPNIVK 80
K +G G F +V+ G VAIK + G ++ E IM +L+H +V+
Sbjct: 15 KRLGNGQFGEVWMG-TWNGNTKVAIKTLKP-----GTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 81 LYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSR-RYFQQLISAVEYCHSRGVF 137
LY V++ + IY V E+ G L F K +GR + + Q+ + + Y
Sbjct: 69 LYAVVSEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 127
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGY 194
HRD I+DFGL+ + E D G + APE A G
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIE----DNEXTARQGAKFPIKWTAPEA-ALYGR 182
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGR 251
K D+WS G++L ++ G +P+ N + ++ +G YR CP+ L +
Sbjct: 183 FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-YRMPCPQDCPISLHELMIH 241
Query: 252 LLDTDPATRITVDEILRDPWFKKDY 276
DP R T + + F +DY
Sbjct: 242 CWKKDPEERPTFEYLQS---FLEDY 263
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 49/297 (16%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV + +G G +++V+ G NV + IK + K + + + PN
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK-----KKIKREIKILQNLXGGPN 88
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
IVKL +++ + + F K+ ++ R Y +L+ A++YCHS+G+
Sbjct: 89 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 148
Query: 138 HRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAK-KGYD 195
HRD + D+GL+ E P + + + PE+L + YD
Sbjct: 149 HRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFKGPELLVDLQDYD 205
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMAMYR-------KIYKGEYRC---PK- 239
+ +DMWS G + + PF N L+ + + +Y +YR P+
Sbjct: 206 YS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 264
Query: 240 -----------W-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
W SP+ F+ +LL D R+T E + P+F++
Sbjct: 265 EALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 49/297 (16%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV + +G G +++V+ G NV + IK + K + + + PN
Sbjct: 35 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK-----KKIKREIKILQNLCGGPN 89
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
IVKL +++ + + F K+ ++ R Y +L+ A++YCHS+G+
Sbjct: 90 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 149
Query: 138 HRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAK-KGYD 195
HRD + D+GL+ E P + + + PE+L + YD
Sbjct: 150 HRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFKGPELLVDLQDYD 206
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMAMYR-------KIYKGEYRC---PK- 239
+ +DMWS G + + PF N L+ + + +Y +YR P+
Sbjct: 207 YS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 265
Query: 240 -----------W-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
W SP+ F+ +LL D R+T E + P+F++
Sbjct: 266 EALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 34/280 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ ++GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHR--ALMSELKIL 75
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGELFAKISKGR--------FSEQLSRRY 120
H N+V L + ++EF K G L + R E L + +
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 121 FQ---------QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
Q+ +E+ SR HRD I DFGL+ + PD
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK-DPD 194
Query: 172 GMLHTLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-R 228
+ P ++APE + + Y + D+WS GV+L+ + + G P+ + + R
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 229 KIYKG-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
++ +G R P +T+P++ + +P+ R T E++
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 49/297 (16%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV + +G G +++V+ G NV + IK + K + + + PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK-----KKIKREIKILQNLXGGPN 87
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
IVKL +++ + + F K+ ++ R Y +L+ A++YCHS+G+
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 138 HRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAK-KGYD 195
HRD + D+GL+ E P + + + PE+L + YD
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMAMYR-------KIYKGEYRC---PK- 239
+ +DMWS G + + PF N L+ + + +Y +YR P+
Sbjct: 205 YS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 240 -----------W-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
W SP+ F+ +LL D R+T E + P+F++
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 49/297 (16%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV + +G G +++V+ G NV + IK + K + + + PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK-----KKIKREIKILQNLXGGPN 87
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
IVKL +++ + + F K+ ++ R Y +L+ A++YCHS+G+
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 138 HRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAK-KGYD 195
HRD + D+GL+ E P + + + PE+L + YD
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMAMYR-------KIYKGEYRC---PK- 239
+ +DMWS G + + PF N L+ + + +Y +YR P+
Sbjct: 205 YS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 240 -----------W-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
W SP+ F+ +LL D R+T E + P+F++
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 34/280 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ ++GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHR--ALMSELKIL 84
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGELFAKISKGR--------FSEQLSRRY 120
H N+V L + ++EF K G L + R E L + +
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 121 FQ---------QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
Q+ +E+ SR HRD I DFGL A PD
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPD 203
Query: 172 GMLHTLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-R 228
+ P ++APE + + Y + D+WS GV+L+ + + G P+ + + R
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 229 KIYKG-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
++ +G R P +T+P++ + +P+ R T E++
Sbjct: 263 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 103/252 (40%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSRGVFH 138
V+ ++ IY VME+ G L KG + L Q+ S + Y H
Sbjct: 80 AVV-SEEPIYIVMEYMSKGCLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 251
Query: 253 LDTDPATRITVD 264
DP R T +
Sbjct: 252 WRKDPEERPTFE 263
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 49/297 (16%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV + +G G +++V+ G NV + IK + K + + + PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK-----KKIKREIKILQNLCGGPN 87
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
IVKL +++ + + F K+ ++ R Y +L+ A++YCHS+G+
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 138 HRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAK-KGYD 195
HRD + D+GL+ E P + + + PE+L + YD
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMAMYR-------KIYKGEYRC---PK- 239
+ +DMWS G + + PF N L+ + + +Y +YR P+
Sbjct: 205 YS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 240 -----------W-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
W SP+ F+ +LL D R+T E + P+F++
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 49/297 (16%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV + +G G +++V+ G NV + IK + K + + + PN
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK-----KKIKREIKILQNLCGGPN 88
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
IVKL +++ + + F K+ ++ R Y +L+ A++YCHS+G+
Sbjct: 89 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 148
Query: 138 HRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAK-KGYD 195
HRD + D+GL+ E P + + + PE+L + YD
Sbjct: 149 HRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFKGPELLVDLQDYD 205
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMAMYR-------KIYKGEYRC---PK- 239
+ +DMWS G + + PF N L+ + + +Y +YR P+
Sbjct: 206 YS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 264
Query: 240 -----------W-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
W SP+ F+ +LL D R+T E + P+F++
Sbjct: 265 EALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 49/297 (16%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV + +G G +++V+ G NV + IK + K + + + PN
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK-----KKIKREIKILQNLCGGPN 87
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
IVKL +++ + + F K+ ++ R Y +L+ A++YCHS+G+
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 138 HRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAK-KGYD 195
HRD + D+GL+ E P + + + PE+L + YD
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFKGPELLVDLQDYD 204
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMAMYR-------KIYKGEYRC---PK- 239
+ +DMWS G + + PF N L+ + + +Y +YR P+
Sbjct: 205 YS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQL 263
Query: 240 -----------W-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
W SP+ F+ +LL D R+T E + P+F++
Sbjct: 264 EALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ +GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVA-VKMLKEGATHSEHR--ALMSELKIL 84
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGEL-------------FAKISKGRFSEQ 115
H N+V L + ++EF K G L + + K + +
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 116 LSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLH 175
Y Q+ +E+ SR HRD I DFGL A PD +
Sbjct: 145 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGL-ARDIYKDPDYVRK 203
Query: 176 TLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-RKIYK 232
P ++APE + + Y + D+WS GV+L+ + + G P+ + + R++ +
Sbjct: 204 GDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKE 262
Query: 233 G-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
G R P +T+P++ + +P+ R T E++
Sbjct: 263 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 82
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + +M+ G L + + K Q + Q+ + Y R
Sbjct: 83 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 197
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 198 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 244
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 80
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + +M+ G L + + K Q + Q+ + Y R
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 195
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 196 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 242
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 79
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + +M+ G L + + K Q + Q+ + Y R
Sbjct: 80 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 194
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 195 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 241
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 81
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + +M+ G L + + K Q + Q+ + Y R
Sbjct: 82 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 196
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 197 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 243
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 103/252 (40%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSRGVFH 138
V+ ++ IY V+E+ G L KG + L Q+ S + Y H
Sbjct: 80 AVV-SEEPIYIVIEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE----DNEXTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 251
Query: 253 LDTDPATRITVD 264
DP R T +
Sbjct: 252 WRKDPEERPTFE 263
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 34/280 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ ++GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHR--ALMSELKIL 75
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGELFAKISKGR--------FSEQLSRRY 120
H N+V L + + EF K G L + R E L + +
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 121 FQ---------QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
Q+ +E+ SR HRD I DFGL+ + PD
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK-DPD 194
Query: 172 GMLHTLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-R 228
+ P ++APE + + Y + D+WS GV+L+ + + G P+ + + R
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 229 KIYKG-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
++ +G R P +T+P++ + +P+ R T E++
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + +M+ G L + + K Q + Q+ + Y R
Sbjct: 79 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 193
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 194 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 240
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQS-VAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G F +V+ G G + VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 17 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 70
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 71 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 129
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAV---KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDG 196
+ I+DFGL+ + E +G + + APE + G
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI----KWTAPEAI-NYGTFT 184
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 185 IKSDVWSFGILLTEIVTHGRIPY 207
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 103/252 (40%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSRGVFH 138
V+ ++ IY V+E+ G L KG + L Q+ S + Y H
Sbjct: 80 AVV-SEEPIYIVIEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 251
Query: 253 LDTDPATRITVD 264
DP R T +
Sbjct: 252 WRKDPEERPTFE 263
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 30/280 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G GAF +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSR-----RY 120
+ +H NI+ L +Y ++E+A G L + R +S ++R
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 121 FQQLIS-------AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
F+ L+S +EY S+ HRD I+DFGL+ I D
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI--DXX 213
Query: 174 LHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
T G P ++APE L + Y + D+WS GV+++ + G P+ + +++ +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
+G P + +L + P+ R T +++ D
Sbjct: 273 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 116/276 (42%), Gaps = 30/276 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ +GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVA-VKMLKEGATHSEHR--ALMSELKIL 84
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGELFAKISKGR---------FSEQLSRR 119
H N+V L + ++EF K G L + R + + L+
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 120 ----YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLH 175
Y Q+ +E+ SR HRD I DFGL A PD +
Sbjct: 145 HLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPDYVRK 203
Query: 176 TLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-RKIYK 232
P ++APE + + Y + D+WS GV+L+ + + G P+ + + R++ +
Sbjct: 204 GDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 262
Query: 233 G-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
G R P +T+P++ + +P+ R T E++
Sbjct: 263 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 34/280 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ ++GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHR--ALMSELKIL 84
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGELFAKISKGR--------FSEQLSRRY 120
H N+V L + ++EF K G L + R E L + +
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 121 FQ---------QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
Q+ +E+ SR HRD I DFGL A PD
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPD 203
Query: 172 GMLHTLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-R 228
+ P ++APE + + Y + D+WS GV+L+ + + G P+ + + R
Sbjct: 204 YVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 229 KIYKG-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
++ +G R P +T+P++ + +P+ R T E++
Sbjct: 263 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 30/280 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G GAF +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSR-----RY 120
+ +H NI+ L +Y ++E+A G L + R +S ++R
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 121 FQQLIS-------AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
F+ L+S +EY S+ HRD I+DFGL+ I D
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI--DYY 213
Query: 174 LHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
+T G P ++APE L + Y + D+WS GV+++ + G P+ + +++ +
Sbjct: 214 KNTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
+G P + +L + P+ R T +++ D
Sbjct: 273 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 102/245 (41%), Gaps = 33/245 (13%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G GAF +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR------------------- 111
+ +H NI+ L +Y ++E+A G L + R
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMT 155
Query: 112 FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
F + +S Y QL +EY S+ HRD I+DFGL+ I D
Sbjct: 156 FKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI--D 211
Query: 172 GMLHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYR 228
T G P ++APE L + Y + D+WS GV+++ + G P+ + +++
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 229 KIYKG 233
+ +G
Sbjct: 271 LLKEG 275
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 34/280 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ ++GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHR--ALMSELKIL 86
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGELFAKISKGR--------FSEQLSRRY 120
H N+V L + ++EF K G L + R E L + +
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF 146
Query: 121 FQ---------QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
Q+ +E+ SR HRD I DFGL A PD
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPD 205
Query: 172 GMLHTLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-R 228
+ P ++APE + + Y + D+WS GV+L+ + + G P+ + + R
Sbjct: 206 YVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 264
Query: 229 KIYKG-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
++ +G R P +T+P++ + +P+ R T E++
Sbjct: 265 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 304
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 80
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + +M+ G L + + K Q + Q+ + Y R
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFG----LSAVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFG L A +++ +G + ++A E +
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI----KWMALESILH 195
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 196 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 242
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 15/222 (6%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKA---VSKQKILRGGLTAHVKREISIMSRLRHPNI 78
K++G G F V+ G + G+S+ I V + K R A ++I S L H +I
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGS-LDHAHI 95
Query: 79 VKLYEVLATKAKIYFVMEFAKGGELFAKI--SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
V+L L + + V ++ G L + +G QL + Q+ + Y G+
Sbjct: 96 VRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM 154
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG--MLHTLCGTPA-YVAPEILAKKG 193
HR+ ++DFG V + + PD +L++ TP ++A E +
Sbjct: 155 VHRNLAARNVLLKSPSQVQVADFG---VADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 194 YDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGE 234
Y + D+WS GV ++ ++ G P+ L + + KGE
Sbjct: 212 YT-HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE 252
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 34/280 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ ++GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHR--ALMSELKIL 121
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGELFAKISKGR--------FSEQLSRRY 120
H N+V L + ++EF K G L + R E L + +
Sbjct: 122 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 181
Query: 121 FQ---------QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
Q+ +E+ SR HRD I DFGL A PD
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPD 240
Query: 172 GMLHTLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-R 228
+ P ++APE + + Y + D+WS GV+L+ + + G P+ + + R
Sbjct: 241 YVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 299
Query: 229 KIYKG-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
++ +G R P +T+P++ + +P+ R T E++
Sbjct: 300 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 339
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 93/235 (39%), Gaps = 44/235 (18%)
Query: 9 SREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREIS 68
S E+ + KY +G+ IG G+F +Y G N+ +G+ VAIK L T H + I
Sbjct: 2 SMELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIK-------LECVKTKHPQLHIE 54
Query: 69 IMSRLRHPNIVKLYEVLATKAKI-----------YFVMEFAKGG----ELFAKISKGRFS 113
K Y+++ I Y VM G +LF S+ +FS
Sbjct: 55 ----------SKFYKMMQGGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFS 103
Query: 114 EQLSRRYFQQLISAVEYCHSRGVFHRDXX---XXXXXXXXXXXXXISDFGLS-----AVK 165
+ Q+IS +EY HS+ HRD I DFGL+ A
Sbjct: 104 LKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163
Query: 166 EQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKV-DMWSCGVVLFVLNAGYLPFN 219
Q P L GT Y + I G + ++ D+ S G VL N G LP+
Sbjct: 164 HQHIPYRENKNLTGTARYAS--INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 80
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + +M+ G L + + K Q + Q+ + Y R
Sbjct: 81 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFG----LSAVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFG L A +++ +G + ++A E +
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI----KWMALESILH 195
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 196 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 242
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 70
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSRGVFH 138
V+ ++ IY V E+ G L KG + L Q+ S + Y H
Sbjct: 71 AVV-SEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 183
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 184 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 242
Query: 253 LDTDPATRITVD 264
DP R T +
Sbjct: 243 WRKDPEERPTFE 254
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 91/242 (37%), Gaps = 12/242 (4%)
Query: 64 KREISIMSRLRHPNIVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRR 119
+REI I+ L IVK V + + VME+ G L F + + R
Sbjct: 59 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 118
Query: 120 YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCG 179
Y Q+ +EY SR HRD I+DFGL+ + + ++
Sbjct: 119 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 178
Query: 180 TPAY-VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+P + APE L+ + + D+WS GVVL+ L P+ A + ++ E P
Sbjct: 179 SPIFWYAPESLSDNIF-SRQSDVWSFGVVLYELFTYCDKSCSPS--AEFLRMMGSERDVP 235
Query: 239 KWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKF----PHEDFDLKDSVGC 294
+ G+ L PA V E+++ W F P D S GC
Sbjct: 236 ALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 295
Query: 295 NV 296
Sbjct: 296 ET 297
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 39/250 (15%)
Query: 24 IGCGAFAKVYHGRNV-----RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
+G F KVY G Q+VAIK + + G L + E + +RL+HPN+
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNV 74
Query: 79 VKLYEVLATKAKIYFVMEFAKGGELFA-----------------KISKGRFSEQLSRRYF 121
V L V+ + + + G+L + K
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 122 QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP 181
Q+ + +EY S V H+D ISD GL +E D + L G
Sbjct: 135 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL--FREVYAAD--YYKLLGNS 190
Query: 182 A----YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF-----NDPNLMAMYRKIY 231
++APE + G D+WS GVVL+ V + G P+ D M R++
Sbjct: 191 LLPIRWMAPEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL 249
Query: 232 KGEYRCPKWT 241
CP W
Sbjct: 250 PCPDDCPAWV 259
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
I+G G F KVY GR + G VA+K + +++ G L + E+ ++S H N+++L
Sbjct: 37 ILGRGGFGKVYKGR-LADGXLVAVKRLKEERTQGGEL--QFQTEVEMISMAVHRNLLRLR 93
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSE---QLSRRYFQQLISA--VEYCHSR--- 134
T + V + G + + + + S+ +R L SA + Y H
Sbjct: 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP 153
Query: 135 GVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
+ HRD + DFGL+ + + + + + G ++APE L+ G
Sbjct: 154 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDXHVXXAVRGXIGHIAPEYLS-TGK 211
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPF------NDPNLMAM 226
K D++ GV+L L G F ND ++M +
Sbjct: 212 SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 85/235 (36%), Gaps = 53/235 (22%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
KY +GK +G G+F V ++ +G+ A+K V + + RE+ IM L H
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN-------RELDIMKVLDHV 60
Query: 77 NIVKLYEVLATKAK--------------------------------------IYFVMEFA 98
NI+KL + T + +ME+
Sbjct: 61 NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 99 KGG---ELFAKISKGR-FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXX-XX 153
L + I GR L Y QL AV + HS G+ HRD
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180
Query: 154 XXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVL 208
+ DFG + K+ I + + +C Y APE++ +D+WS G V
Sbjct: 181 LKLCDFG--SAKKLIPSEPSVAXICSR-FYRAPELMLGATEYTPSIDLWSIGCVF 232
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 31/272 (11%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR---- 74
+ GK +G GAF KV G+ A+ V+ K+L+ TAH + ++MS L+
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKS--TAHADEKEALMSELKIMSH 105
Query: 75 ---HPNIVKLYEVLATKAKIYFVMEFAKGGELF--------AKISK--GRFSEQLSRRYF 121
H NIV L + + E+ G+L A + K GR E +F
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 122 -QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG--MLHTLC 178
Q+ + + S+ HRD I DFGL+ I D ++
Sbjct: 166 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RDIMNDSNYIVKGNA 222
Query: 179 GTPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR 236
P ++APE + Y + D+WS G++L+ + + G P+ + + + K+ K Y+
Sbjct: 223 RLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ 281
Query: 237 C--PKWTSPDLKWFIGRLLDTDPATRITVDEI 266
P + ++ + +P R T +I
Sbjct: 282 MAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 39/250 (15%)
Query: 24 IGCGAFAKVYHGRNV-----RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
+G F KVY G Q+VAIK + + G L + E + +RL+HPN+
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNV 91
Query: 79 VKLYEVLATKAKIYFVMEFAKGGELFA-----------------KISKGRFSEQLSRRYF 121
V L V+ + + + G+L + K
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 122 QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP 181
Q+ + +EY S V H+D ISD GL +E D + L G
Sbjct: 152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL--FREVYAAD--YYKLLGNS 207
Query: 182 A----YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF-----NDPNLMAMYRKIY 231
++APE + G D+WS GVVL+ V + G P+ D M R++
Sbjct: 208 LLPIRWMAPEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL 266
Query: 232 KGEYRCPKWT 241
CP W
Sbjct: 267 PCPDDCPAWV 276
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 82
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + +M+ G L + + K Q + Q+ + Y R
Sbjct: 83 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFG----LSAVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFG L A +++ +G + ++A E +
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI----KWMALESILH 197
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 198 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 244
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSRGVFH 138
V+ ++ IY V E+ G L KG + L Q+ S + Y H
Sbjct: 80 AVV-SEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 251
Query: 253 LDTDPATRITVD 264
DP R T +
Sbjct: 252 WRKDPEERPTFE 263
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 49/297 (16%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
YEV + +G G +++V+ G NV + IK + K + + + PN
Sbjct: 54 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK-----KKIKREIKILQNLXGGPN 108
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRGVF 137
IVKL +++ + + F K+ ++ R Y +L+ A++YCHS+G+
Sbjct: 109 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 168
Query: 138 HRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAK-KGYD 195
HRD + D+GL+ E P + + + PE+L + YD
Sbjct: 169 HRDVKPHNVMIDHELRKLRLIDWGLA---EFYHPGKEYNVRVASRYFKGPELLVDLQDYD 225
Query: 196 GAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMAMYRKI-------YKGEYRC---PK- 239
+ +DMWS G + + PF N L+ + + + Y +YR P+
Sbjct: 226 YS-LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQL 284
Query: 240 -----------W-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
W SP+ F+ +LL D R+T E + P+F++
Sbjct: 285 EALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 68
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSRGVFH 138
V+ ++ IY V E+ G L KG + L Q+ S + Y H
Sbjct: 69 AVV-SEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 126
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 181
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 182 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 240
Query: 253 LDTDPATRITVD 264
DP R T +
Sbjct: 241 WRKDPEERPTFE 252
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSRGVFH 138
V+ ++ IY V E+ G L KG + L Q+ S + Y H
Sbjct: 80 AVV-SEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 251
Query: 253 LDTDPATRITVD 264
DP R T +
Sbjct: 252 WRKDPEERPTFE 263
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 112/272 (41%), Gaps = 31/272 (11%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH------VKREISIMSR 72
+ GK +G GAF KV G+ A+ V+ K+L+ TAH + E+ IMS
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKS--TAHADEKEALMSELKIMSH 97
Query: 73 L-RHPNIVKLYEVLATKAKIYFVMEFAKGGELF--------AKISK--GRFSEQLSRRYF 121
L +H NIV L + + E+ G+L A + K GR E +F
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 122 -QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG--MLHTLC 178
Q+ + + S+ HRD I DFGL+ I D ++
Sbjct: 158 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RDIMNDSNYIVKGNA 214
Query: 179 GTPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYR 236
P ++APE + Y + D+WS G++L+ + + G P+ + + + K+ K Y+
Sbjct: 215 RLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ 273
Query: 237 C--PKWTSPDLKWFIGRLLDTDPATRITVDEI 266
P + ++ + +P R T +I
Sbjct: 274 MAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GNMSPEAFLQEAQVMKKLRHEKLVQLY 246
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSRGVFH 138
V++ + IY V E+ G L + KG + L Q+ S + Y H
Sbjct: 247 AVVS-EEPIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL + E D G + APE A G
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 359
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 360 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 418
Query: 253 LDTDPATRITVD 264
DP R T +
Sbjct: 419 WRKDPEERPTFE 430
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSRGVFH 138
V+ ++ IY V E+ G L KG + L Q+ S + Y H
Sbjct: 80 AVV-SEEPIYIVCEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 251
Query: 253 LDTDPATRITVD 264
DP R T +
Sbjct: 252 WRKDPEERPTFE 263
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 115/280 (41%), Gaps = 34/280 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ ++GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHR--ALMSELKIL 75
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGELFAKISKGR--------FSEQLSRRY 120
H N+V L + + EF K G L + R E L + +
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 121 FQ---------QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
Q+ +E+ SR HRD I DFGL A PD
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPD 194
Query: 172 GMLHTLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-R 228
+ P ++APE + + Y + D+WS GV+L+ + + G P+ + + R
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 229 KIYKG-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
++ +G R P +T+P++ + +P+ R T E++
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 30/280 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G GAF +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMK 95
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSR-----RY 120
+ +H NI+ L +Y ++E+A G L + R +S ++R
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 121 FQQLIS-------AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
F+ L+S +EY S+ HRD I+DFGL+ I D
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI--DYY 213
Query: 174 LHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
T G P ++APE L + Y + D+WS GV+++ + G P+ + +++ +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
+G P + +L + P+ R T +++ D
Sbjct: 273 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 20/203 (9%)
Query: 24 IGCGAFAKVYHGR-NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKLY 82
+G G +V+ G N T VA+K++ + + A E ++M +L+H +V+LY
Sbjct: 21 LGAGQAGEVWMGYYNGHT--KVAVKSLKQGSMSPDAFLA----EANLMKQLQHQRLVRLY 74
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKG-RFSEQLSRRYFQQLISAVEYCHSRGVFHR 139
V+ T+ IY + E+ + G L F K G + + Q+ + + R HR
Sbjct: 75 AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 140 DXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYDG 196
D I+DFGL+ + E D G + APE + G
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIE----DAEXTAREGAKFPIKWTAPEAI-NYGTFT 188
Query: 197 AKVDMWSCGVVLF-VLNAGYLPF 218
K D+WS G++L ++ G +P+
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 30/237 (12%)
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRY-----FQQLISA 127
HPN+++ Y T +Y +E SK E +L + Y +Q+ S
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXX-------------ISDFGLSAVKE--QIRPDG 172
V + HS + HRD ISDFGL + Q
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 173 MLHTLCGTPAYVAPEIL--AKKGYDGAKVDMWSCGVVLF-VLNAGYLPFND--PNLMAMY 227
L+ GT + APE+L + K +D++S G V + +L+ G PF D +
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 228 RKIYK-GEYRCPKWTS--PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
R I+ E +C S + I +++D DP R T ++LR P F K+ +F
Sbjct: 266 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEF 322
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 30/280 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G GAF +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSR-----RY 120
+ +H NI+ L +Y ++E+A G L + R +S ++R
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 121 FQQLIS-------AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
F+ L+S +EY S+ HRD I+DFGL+ I D
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNI--DYY 213
Query: 174 LHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
T G P ++APE L + Y + D+WS GV+++ + G P+ + +++ +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
+G P + +L + P+ R T +++ D
Sbjct: 273 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 115/280 (41%), Gaps = 34/280 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ ++GK +G GAF +V ++ + V+ K+L+ G T R ++MS L+
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVA-VKMLKEGATHSEHR--ALMSELKIL 75
Query: 75 -----HPNIVKLYEVLATKA-KIYFVMEFAKGGELFAKISKGR--------FSEQLSRRY 120
H N+V L + + EF K G L + R E L + +
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 121 FQ---------QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD 171
Q+ +E+ SR HRD I DFGL A PD
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL-ARDIYKDPD 194
Query: 172 GMLHTLCGTP-AYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMY-R 228
+ P ++APE + + Y + D+WS GV+L+ + + G P+ + + R
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 229 KIYKG-EYRCPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
++ +G R P +T+P++ + +P+ R T E++
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 94/237 (39%), Gaps = 30/237 (12%)
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRY-----FQQLISA 127
HPN+++ Y T +Y +E SK E +L + Y +Q+ S
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXX-------------ISDFGLSAVKE--QIRPDG 172
V + HS + HRD ISDFGL + Q
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 173 MLHTLCGTPAYVAPEIL--AKKGYDGAKVDMWSCGVVLF-VLNAGYLPFND--PNLMAMY 227
L+ GT + APE+L + K +D++S G V + +L+ G PF D +
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
Query: 228 RKIYK-GEYRCPKWTS--PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
R I+ E +C S + I +++D DP R T ++LR P F K+ +F
Sbjct: 266 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEF 322
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 15/222 (6%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKA---VSKQKILRGGLTAHVKREISIMSRLRHPNI 78
K++G G F V+ G + G+S+ I V + K R A ++I S L H +I
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGS-LDHAHI 77
Query: 79 VKLYEVLATKAKIYFVMEFAKGGELFAKI--SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
V+L L + + V ++ G L + +G QL + Q+ + Y G+
Sbjct: 78 VRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM 136
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPD--GMLHTLCGTPA-YVAPEILAKKG 193
HR+ ++DFG V + + PD +L++ TP ++A E +
Sbjct: 137 VHRNLAARNVLLKSPSQVQVADFG---VADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 194 YDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGE 234
Y + D+WS GV ++ ++ G P+ L + + KGE
Sbjct: 194 YT-HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE 234
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 4 NTGDISREVNLFGKYEVGKIIGCGAFAKVYHG--RNVRTGQSVAIKAVSKQKILRGGLTA 61
N GDI + G+YEV I G +Y RNV G+ V +K + A
Sbjct: 73 NPGDI-----VAGQYEVKGCIAHGGLGWIYLALDRNV-NGRPVVLKGLVHSGDAEAQAMA 126
Query: 62 HVKREISIMSRLRHPNIVKLYEVLATKAKI-----YFVMEFAKGGELFAKISKGR---FS 113
+R+ ++ + HP+IV+++ + + Y VME+ G L K SKG+ +
Sbjct: 127 MAERQF--LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL--KRSKGQKLPVA 182
Query: 114 EQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
E ++ Y +++ A+ Y HS G+ + D I L AV +I G
Sbjct: 183 EAIA--YLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLID---LGAVS-RINSFGY 236
Query: 174 LHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVL-------NAGY---LPFNDPNL 223
L+ GTP + APEI+ + G A D+++ G L L N Y LP +DP L
Sbjct: 237 LY---GTPGFQAPEIV-RTGPTVA-TDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVL 291
Query: 224 MAMYRKIYKGEYRCPKWTSPDLKWFIGRLLDTDPATRITVDE 265
K Y R + R +D DP R T E
Sbjct: 292 -----KTYDSYGR-----------LLRRAIDPDPRQRFTTAE 317
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 30/280 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G GAF +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSR-----RY 120
+ +H NI+ L +Y ++E+A G L + R +S ++R
Sbjct: 96 MIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 121 FQQLIS-------AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
F+ L+S +EY S+ HRD I+DFGL+ I D
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI--DYY 213
Query: 174 LHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
T G P ++APE L + Y + D+WS GV+++ + G P+ + +++ +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
+G P + +L + P+ R T +++ D
Sbjct: 273 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 91/242 (37%), Gaps = 12/242 (4%)
Query: 64 KREISIMSRLRHPNIVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRR 119
+REI I+ L IVK V + + VME+ G L F + + R
Sbjct: 72 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 131
Query: 120 YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCG 179
Y Q+ +EY SR HRD I+DFGL+ + + ++
Sbjct: 132 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 191
Query: 180 TPAY-VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+P + APE L+ + + D+WS GVVL+ L P+ A + ++ E P
Sbjct: 192 SPIFWYAPESLSDNIFS-RQSDVWSFGVVLYELFTYCDKSCSPS--AEFLRMMGCERDVP 248
Query: 239 KWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKF----PHEDFDLKDSVGC 294
+ G+ L PA V E+++ W F P D S GC
Sbjct: 249 ALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308
Query: 295 NV 296
Sbjct: 309 ET 310
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 193
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 194 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 240
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 30/280 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G GAF +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSR-----RY 120
+ +H NI+ L +Y ++E+A G L + R +S ++R
Sbjct: 96 MIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 121 FQQLIS-------AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
F+ L+S +EY S+ HRD I+DFGL+ I D
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI--DYY 213
Query: 174 LHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
T G P ++APE L + Y + D+WS GV+++ + G P+ + +++ +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
+G P + +L + P+ R T +++ D
Sbjct: 273 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 19 EVGKIIGCGAFAKVYHGRNV---RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-R 74
E GK++G GAF KV + +TG S+ + ++ + E+ +M++L
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFS---------------EQLS 117
H NIV L IY + E+ G+L + + + +FS E L+
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 118 RRYFQQLIS-------AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGL-----SAVK 165
F+ L+ +E+ + HRD I DFGL S
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 166 EQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
+R + L ++APE L + Y K D+WS G++L+ + + G P+
Sbjct: 228 YVVRGNARLPV-----KWMAPESLFEGIYT-IKSDVWSYGILLWEIFSLGVNPY 275
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 24 IGCGAFAKVYHGR--NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVKL 81
+G GAF KV+ N+ Q + AV K RE +++ L+H +IVK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 82 YEVLATKAKIYFVMEFAKGGEL--FAK--------ISKGRFSEQLSRRYF----QQLISA 127
Y V + V E+ K G+L F + +++G +L++ QQ+ +
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS---AVKEQIRPDGMLHTLCGTPAYV 184
+ Y S+ HRD I DFG+S + R G HT+ ++
Sbjct: 141 MVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG--HTMLPI-RWM 197
Query: 185 APEILAKKGYDGAKVDMWSCGVVLF 209
PE + + + + D+WS GVVL+
Sbjct: 198 PPESIMYRKFT-TESDVWSLGVVLW 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 111/267 (41%), Gaps = 27/267 (10%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQ-SVAIKAVSKQKILRGGLTA-HVKREISIMSRLRHPNIV 79
K +G G F V G+ GQ VA+K + + G ++ +E M +L HP +V
Sbjct: 14 KELGSGQFGVVKLGK--WKGQYDVAVKMIKE-----GSMSEDEFFQEAQTMMKLSHPKLV 66
Query: 80 KLYEVLATKAKIYFVMEFAKGGELFAKI---SKGRFSEQLSRRYFQQLISAVEYCHSRGV 136
K Y V + + IY V E+ G L + KG QL + + + + S
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCY-DVCEGMAFLESHQF 125
Query: 137 FHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKG 193
HRD +SDFG++ + D + GT + APE+
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMT----RYVLDDQYVSSVGTKFPVKWSAPEVFHYFK 181
Query: 194 YDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGE--YRCPKWTSPDLKWFIG 250
Y +K D+W+ G++++ V + G +P++ + K+ +G YR P S + +
Sbjct: 182 Y-SSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR-PHLASDTIYQIMY 239
Query: 251 RLLDTDPATRITVDEILR--DPWFKKD 275
P R T ++L +P +KD
Sbjct: 240 SCWHELPEKRPTFQQLLSSIEPLREKD 266
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 8/213 (3%)
Query: 64 KREISIMSRLRHPNIVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRR 119
+REI I+ L IVK V + ++ VME+ G L F + + R
Sbjct: 56 QREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLL 115
Query: 120 YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCG 179
Y Q+ +EY SR HRD I+DFGL+ + + ++
Sbjct: 116 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQ 175
Query: 180 TPAY-VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+P + APE L+ + + D+WS GVVL+ L P+ A + ++ E P
Sbjct: 176 SPIFWYAPESLSDNIF-SRQSDVWSFGVVLYELFTYCDKSCSPS--AEFLRMMGCERDVP 232
Query: 239 KWTSPDLKWFIGRLLDTDPATRITVDEILRDPW 271
G+ L PA V E+++ W
Sbjct: 233 ALCRLLELLEEGQRLPAPPACPAEVHELMKLCW 265
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 96/243 (39%), Gaps = 38/243 (15%)
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRY-----FQQLISA 127
HPN+++ Y T +Y +E SK E +L + Y +Q+ S
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXX-------------ISDFGL----SAVKEQIRP 170
V + HS + HRD ISDFGL + + R
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 171 DGMLHTLCGTPAYVAPEILAKKGYDGAK------VDMWSCGVVLF-VLNAGYLPFND--P 221
+ L+ GT + APE+L + K +D++S G V + +L+ G PF D
Sbjct: 188 N--LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 222 NLMAMYRKIYK-GEYRCPKWTS--PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKE 278
+ R I+ E +C S + I +++D DP R T ++LR P F K+
Sbjct: 246 RESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKK 305
Query: 279 RKF 281
+F
Sbjct: 306 LEF 308
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 16/235 (6%)
Query: 16 GKYEVGKIIGCG--AFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL 73
G YE+ +IG G V R TG+ V ++ ++ + + ++ E+ +
Sbjct: 9 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLF 67
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGG---ELFAKISKGRFSEQLSRRYFQQLISAVEY 130
HPNIV +++ V F G +L +E Q ++ A++Y
Sbjct: 68 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 127
Query: 131 CHSRGVFHRDXXXXXXXXXXXXXXXISDF--GLSAV----KEQIRPDGMLHTLCGTPAYV 184
H G HR +S LS + ++++ D +++ P ++
Sbjct: 128 IHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP-WL 186
Query: 185 APEILAK--KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRC 237
+PE+L + +GYD AK D++S G+ L G++PF D M + G C
Sbjct: 187 SPEVLQQNLQGYD-AKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 240
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 109/276 (39%), Gaps = 35/276 (12%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH------VKREISIMSR 72
+ GK +G GAF KV G+ A+ V+ K+L+ TAH + E+ IMS
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKS--TAHADEKEALMSELKIMSH 105
Query: 73 L-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFA---------------KISKGRFSEQL 116
L +H NIV L + + E+ G+L I+ S +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 117 SRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG--ML 174
+ Q+ + + S+ HRD I DFGL+ I D ++
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RDIMNDSNYIV 222
Query: 175 HTLCGTPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYK 232
P ++APE + Y + D+WS G++L+ + + G P+ + + + K+ K
Sbjct: 223 KGNARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
Query: 233 GEYRC--PKWTSPDLKWFIGRLLDTDPATRITVDEI 266
Y+ P + ++ + +P R T +I
Sbjct: 282 DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 102/252 (40%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M ++RH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKIRHEKLVQLY 79
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSRGVFH 138
V+ ++ IY V E+ G L KG + L Q+ S + Y H
Sbjct: 80 AVV-SEEPIYIVTEYMSKGSLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 251
Query: 253 LDTDPATRITVD 264
DP R T +
Sbjct: 252 WRKDPEERPTFE 263
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ ++Y S+
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL A + +H G ++A E L + +
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 214 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 262
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 16/235 (6%)
Query: 16 GKYEVGKIIGCG--AFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL 73
G YE+ +IG G V R TG+ V ++ ++ + + ++ E+ +
Sbjct: 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLF 83
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGG---ELFAKISKGRFSEQLSRRYFQQLISAVEY 130
HPNIV +++ V F G +L +E Q ++ A++Y
Sbjct: 84 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 143
Query: 131 CHSRGVFHRDXXXXXXXXXXXXXXXISDF--GLSAV----KEQIRPDGMLHTLCGTPAYV 184
H G HR +S LS + ++++ D +++ P ++
Sbjct: 144 IHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLP-WL 202
Query: 185 APEILAK--KGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRC 237
+PE+L + +GYD AK D++S G+ L G++PF D M + G C
Sbjct: 203 SPEVLQQNLQGYD-AKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 256
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 90/242 (37%), Gaps = 12/242 (4%)
Query: 64 KREISIMSRLRHPNIVKLYEVL--ATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRR 119
+REI I+ L IVK V + + VME+ G L F + + R
Sbjct: 60 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 119
Query: 120 YFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCG 179
Y Q+ +EY SR HRD I+DFGL+ + + ++
Sbjct: 120 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQ 179
Query: 180 TPAY-VAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCP 238
+P + APE L+ + + D+WS GVVL+ L P+ A + ++ E P
Sbjct: 180 SPIFWYAPESLSDNIF-SRQSDVWSFGVVLYELFTYCDKSCSPS--AEFLRMMGCERDVP 236
Query: 239 KWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKF----PHEDFDLKDSVGC 294
G+ L PA V E+++ W F P D S GC
Sbjct: 237 ALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 296
Query: 295 NV 296
Sbjct: 297 ET 298
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 102/252 (40%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 83 EVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYF----QQLISAVEYCHSRGVFH 138
V+ ++ IY V E+ G L KG + L Q+ S + Y H
Sbjct: 80 AVV-SEEPIYIVTEYMSKGCLL-DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 192
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 251
Query: 253 LDTDPATRITVD 264
DP R T +
Sbjct: 252 WRKDPEERPTFE 263
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 19 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 72
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSE--QLSRRYFQQLISAVEYCHSRGVFH 138
V+ ++ IY V E+ G L F K G++ QL Q+ S + Y H
Sbjct: 73 AVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVH 130
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 185
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 186 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 244
Query: 253 LDTDPATRITVD 264
+P R T +
Sbjct: 245 WRKEPEERPTFE 256
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 103
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 104 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 162
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 163 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 218
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 219 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 265
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 76
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSE--QLSRRYFQQLISAVEYCHSRGVFH 138
V+ ++ IY V E+ G L F K G++ QL Q+ S + Y H
Sbjct: 77 AVV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS-AQIASGMAYVERMNYVH 134
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIE----DNEWTARQGAKFPIKWTAPEA-ALYGRF 189
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 248
Query: 253 LDTDPATRITVD 264
+P R T +
Sbjct: 249 WRKEPEERPTFE 260
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 76
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSE--QLSRRYFQQLISAVEYCHSRGVFH 138
V+ ++ IY V E+ G L F K G++ QL Q+ S + Y H
Sbjct: 77 AVV-SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS-AQIASGMAYVERMNYVH 134
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 189
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 248
Query: 253 LDTDPATRITVD 264
+P R T +
Sbjct: 249 WRKEPEERPTFE 260
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 94/241 (39%), Gaps = 34/241 (14%)
Query: 75 HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSE--QLSRRY-----FQQLISA 127
HPN+++ Y T +Y +E SK E +L + Y +Q+ S
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 128 VEYCHSRGVFHRDXXXXXXXXXXXXXXX-------------ISDFGLSAVKE--QIRPDG 172
V + HS + HRD ISDFGL + Q
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 187
Query: 173 MLHTLCGTPAYVAPEILAKKGYDGAK------VDMWSCGVVLF-VLNAGYLPFND--PNL 223
L+ GT + APE+L + K +D++S G V + +L+ G PF D
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247
Query: 224 MAMYRKIYK-GEYRCPKWTS--PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERK 280
+ R I+ E +C S + I +++D DP R T ++LR P F K+ +
Sbjct: 248 SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLE 307
Query: 281 F 281
F
Sbjct: 308 F 308
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSE--QLSRRYFQQLISAVEYCHSRGVFH 138
V++ + IY V E+ G L F K G++ QL Q+ S + Y H
Sbjct: 246 AVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVH 303
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 358
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 417
Query: 253 LDTDPATRITVD 264
+P R T +
Sbjct: 418 WRKEPEERPTFE 429
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 80
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 81 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 195
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 196 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 242
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 75
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 76 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRR 134
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 135 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 190
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 191 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 237
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSE--QLSRRYFQQLISAVEYCHSRGVFH 138
V++ + IY V E+ G L F K G++ QL Q+ S + Y H
Sbjct: 246 AVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVH 303
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 358
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 417
Query: 253 LDTDPATRITVD 264
+P R T +
Sbjct: 418 WRKEPEERPTFE 429
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 81
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 196
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 197 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 243
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 193
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 194 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 240
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 81
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 196
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 197 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 243
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 88
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 89 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 147
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 148 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 203
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 204 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 250
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 85
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 86 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 200
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 201 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 247
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 81
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 82 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 196
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 197 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 243
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 193
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 194 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 240
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 72
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 73 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 131
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 187
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 188 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++ GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 85
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + +M+ G L + + K Q + Q+ + Y R
Sbjct: 86 VCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 200
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 201 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 247
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 30/280 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G G F +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 28 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 87
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSR-----RY 120
+ +H NI+ L +Y ++E+A G L + R +S ++R
Sbjct: 88 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 147
Query: 121 FQQLISA-------VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
F+ L+S +EY S+ HRD I+DFGL+ I D
Sbjct: 148 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI--DYY 205
Query: 174 LHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
T G P ++APE L + Y + D+WS GV+++ + G P+ + +++ +
Sbjct: 206 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 264
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
+G P + +L + P+ R T +++ D
Sbjct: 265 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 304
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 84
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 85 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 143
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 144 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 199
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 200 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 246
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 275 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 328
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSE--QLSRRYFQQLISAVEYCHSRGVFH 138
V+ ++ IY V E+ G L F K G++ QL Q+ S + Y H
Sbjct: 329 AVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVH 386
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 441
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 442 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 500
Query: 253 LDTDPATRITVD 264
+P R T +
Sbjct: 501 WRKEPEERPTFE 512
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 30/280 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G G F +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 23 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 82
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSR-----RY 120
+ +H NI+ L +Y ++E+A G L + R +S ++R
Sbjct: 83 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 142
Query: 121 FQQLISA-------VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
F+ L+S +EY S+ HRD I+DFGL+ I D
Sbjct: 143 FKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNI--DYY 200
Query: 174 LHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
T G P ++APE L + Y + D+WS GV+++ + G P+ + +++ +
Sbjct: 201 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 259
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
+G P + +L + P+ R T +++ D
Sbjct: 260 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 299
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 30/280 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G G F +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 25 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 84
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSR-----RY 120
+ +H NI+ L +Y ++E+A G L + R +S ++R
Sbjct: 85 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 144
Query: 121 FQQLISA-------VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
F+ L+S +EY S+ HRD I+DFGL+ I D
Sbjct: 145 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI--DYY 202
Query: 174 LHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
T G P ++APE L + Y + D+WS GV+++ + G P+ + +++ +
Sbjct: 203 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 261
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
+G P + +L + P+ R T +++ D
Sbjct: 262 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 301
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 107/279 (38%), Gaps = 42/279 (15%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-RHPNIVKL 81
+IG G F +V R + G + ++ E+ ++ +L HPNI+ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGRFSE----------QLSRRYFQQLIS----- 126
+ +Y +E+A G L + K R E S QQL+
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 127 --AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA-Y 183
++Y + HRD I+DFGLS +E + T+ P +
Sbjct: 152 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----VKKTMGRLPVRW 207
Query: 184 VAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTS 242
+A E L Y D+WS GV+L+ +++ G P+ +Y K+ +G YR K +
Sbjct: 208 MAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLN 265
Query: 243 PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
D + V +++R W +K Y+ F
Sbjct: 266 CDDE----------------VYDLMRQCWREKPYERPSF 288
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 107/279 (38%), Gaps = 42/279 (15%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-RHPNIVKL 81
+IG G F +V R + G + ++ E+ ++ +L HPNI+ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGRFSE----------QLSRRYFQQLIS----- 126
+ +Y +E+A G L + K R E S QQL+
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 127 --AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA-Y 183
++Y + HRD I+DFGLS +E + T+ P +
Sbjct: 142 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----VKKTMGRLPVRW 197
Query: 184 VAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTS 242
+A E L Y D+WS GV+L+ +++ G P+ +Y K+ +G YR K +
Sbjct: 198 MAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLN 255
Query: 243 PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
D + V +++R W +K Y+ F
Sbjct: 256 CDDE----------------VYDLMRQCWREKPYERPSF 278
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 121 FQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT---- 176
F Q+ AVE+ HS+G+ HRD + DFGL +Q + + T
Sbjct: 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 177 ------LCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVL 211
GT Y++PE + Y KVD++S G++LF L
Sbjct: 230 YATHXGQVGTKLYMSPEQIHGNNY-SHKVDIFSLGLILFEL 269
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPN 77
+E + +G G F V+ +N + AIK + R V RE+ +++L HP
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPG 65
Query: 78 IVKLY 82
IV+ +
Sbjct: 66 IVRYF 70
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 30/277 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMSRL- 73
+GK +G GAF +V + + + K+L+ T + + E+ +M +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FS--------EQLSRRY 120
+H NI+ L +Y ++E+A G L + R FS EQLS +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 121 F----QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT 176
Q+ +EY S+ HRD I+DFGL+ I D T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI--DXXKKT 209
Query: 177 LCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG 233
G P ++APE L + Y + D+WS GV+L+ + G P+ + +++ + +G
Sbjct: 210 TNGRLPVKWMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 234 E-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
P + +L + P+ R T +++ D
Sbjct: 269 HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 6 GDISREVNLFGKYEVGKIIGCGAFAKVYHG--RNVRTGQS---VAIKAVSKQKILRGGLT 60
G++SRE K + + +G G+F VY G R++ G++ VA+K V++ LR +
Sbjct: 11 GEVSRE-----KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI- 64
Query: 61 AHVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL---------FAKISKGR 111
E S+M ++V+L V++ VME G+L A+ + GR
Sbjct: 65 -EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 123
Query: 112 FSEQLSR--RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIR 169
L + ++ + Y +++ HRD I DFG++ ++
Sbjct: 124 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDIYE 181
Query: 170 PD-------GMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNA 213
D G+L ++APE L K G DMWS GVVL+ + +
Sbjct: 182 TDYYRKGGKGLLPV-----RWMAPESL-KDGVFTTSSDMWSFGVVLWEITS 226
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 80
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 81 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFG----LSAVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFG L A +++ +G + ++A E +
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI----KWMALESILH 195
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 196 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 242
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 108/276 (39%), Gaps = 35/276 (12%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR---- 74
+ GK +G GAF KV G+ A+ V+ K+L+ TAH + ++MS L+
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKS--TAHADEKEALMSELKIMSH 105
Query: 75 ---HPNIVKLYEVLATKAKIYFVMEFAKGGELFA---------------KISKGRFSEQL 116
H NIV L + + E+ G+L I+ S +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 117 SRRYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG--ML 174
+ Q+ + + S+ HRD I DFGL+ I D ++
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RDIMNDSNYIV 222
Query: 175 HTLCGTPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYK 232
P ++APE + Y + D+WS G++L+ + + G P+ + + + K+ K
Sbjct: 223 KGNARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
Query: 233 GEYRC--PKWTSPDLKWFIGRLLDTDPATRITVDEI 266
Y+ P + ++ + +P R T +I
Sbjct: 282 DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFG----LSAVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFG L A +++ +G + ++A E +
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI----KWMALESILH 193
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 194 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 240
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 98/229 (42%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 85
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 86 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFG----LSAVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFG L A +++ +G + ++A E +
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI----KWMALESILH 200
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 201 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 247
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ +++ S+
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL+ D +H G ++A E L + +
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVKWMALESLQTQKF 215
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 216 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 264
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ +++ S+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL+ D +H G ++A E L + +
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVKWMALESLQTQKF 214
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 215 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 263
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 245
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSE--QLSRRYFQQLISAVEYCHSRGVFH 138
V++ + IY V E+ G L F K G++ QL Q+ S + Y H
Sbjct: 246 AVVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVH 303
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIE----DNEYTARQGAKFPIKWTAPEA-ALYGRF 358
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 417
Query: 253 LDTDPATRITVD 264
+P R T +
Sbjct: 418 WRKEPEERPTFE 429
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 29/228 (12%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G G F +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 141
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSR-----RY 120
+ +H NI+ L +Y ++E+A G L + R +S ++R
Sbjct: 142 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201
Query: 121 FQQLISA-------VEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
F+ L+S +EY S+ HRD I+DFGL+ I D
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI--DYY 259
Query: 174 LHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
T G P ++APE L + Y + D+WS GV+++ + G P+
Sbjct: 260 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 93/238 (39%), Gaps = 50/238 (21%)
Query: 9 SREVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREIS 68
S E+ + +Y +G+ IG G+F +Y G ++ G+ VAIK
Sbjct: 2 SMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC------------------ 43
Query: 69 IMSRLRHPNI---VKLYEVLATKAKI-----------YFVMEFAKGG----ELFAKISKG 110
+ +HP + K+Y+++ I Y VM G +LF S+
Sbjct: 44 --VKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR- 100
Query: 111 RFSEQLSRRYFQQLISAVEYCHSRGVFHRDXX---XXXXXXXXXXXXXISDFGLS----- 162
+FS + Q+IS +EY HS+ HRD I DFGL+
Sbjct: 101 KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160
Query: 163 AVKEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKV-DMWSCGVVLFVLNAGYLPFN 219
A Q P L GT Y + I G + ++ D+ S G VL N G LP+
Sbjct: 161 ARTHQHIPYRENKNLTGTARYAS--INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ +++ S+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 155
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL+ D +H G ++A E L + +
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVKWMALESLQTQKF 214
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 215 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 263
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ +++ S+
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 156
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL+ D +H G ++A E L + +
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDS-VHNKTGAKLPVKWMALESLQTQKF 215
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 216 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 264
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ +++ S+
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 153
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL+ D +H G ++A E L + +
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVKWMALESLQTQKF 212
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 213 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 261
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ +++ S+
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 160
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL+ D +H G ++A E L + +
Sbjct: 161 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVKWMALESLQTQKF 219
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 220 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 268
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G++V I K+LR + +EI +M+ + P
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAI--KVLRENTSPKANKEILDEAYVMAGVGSPY 80
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGELFAKI--SKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + V + G L + ++GR Q + Q+ + Y
Sbjct: 81 VSRLLGICLT-STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLSAV----KEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ + + + DG + ++A E + +
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPI----KWMALESILR 195
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ + + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 196 RRFT-HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE-RLPQ 242
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 44/285 (15%)
Query: 19 EVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAH------VKREISIMSR 72
+ GK +G GAF KV G+ A+ V+ K+L+ TAH + E+ IMS
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKS--TAHADEKEALMSELKIMSH 90
Query: 73 L-RHPNIVKLYEVLATKAKIYFVMEFAKGGELF------------AKISKGRFSEQLSR- 118
L +H NIV L + + E+ G+L ++ G+ E L +
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 119 -----------RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQ 167
+ Q+ + + S+ HRD I DFGL+
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA---RD 207
Query: 168 IRPDG--MLHTLCGTPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNL 223
I D ++ P ++APE + Y + D+WS G++L+ + + G P+ +
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPYPGILV 266
Query: 224 MAMYRKIYKGEYRC--PKWTSPDLKWFIGRLLDTDPATRITVDEI 266
+ + K+ K Y+ P + ++ + +P R T +I
Sbjct: 267 NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 30/280 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G GAF +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSR-----RY 120
+ +H NI+ L +Y ++ +A G L + R +S ++R
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 121 FQQLIS-------AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
F+ L+S +EY S+ HRD I+DFGL+ I D
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI--DYY 213
Query: 174 LHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
T G P ++APE L + Y + D+WS GV+++ + G P+ + +++ +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
+G P + +L + P+ R T +++ D
Sbjct: 273 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ ++Y S+
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 173
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL A + +H G ++A E L + +
Sbjct: 174 HRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 232
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 233 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 281
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ ++Y S+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL A + +H G ++A E L + +
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 215 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 263
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 115/275 (41%), Gaps = 18/275 (6%)
Query: 7 DISREVNLFGK-YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGL-TAHVK 64
D SR + F + ++ +G G++ +V+ R+ G+ A+K RG A
Sbjct: 47 DPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFRGPKDRARKL 104
Query: 65 REISIMSRL-RHPNIVKLYEVLATKAKIYFVMEFAKGG-ELFAKISKGRFSEQLSRRYFQ 122
E+ ++ +HP V+L + +Y E + + E Y +
Sbjct: 105 AEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLR 164
Query: 123 QLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA 182
+ A+ + HS+G+ H D + DFGL ++ G G P
Sbjct: 165 DTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLV---ELGTAGAGEVQEGDPR 221
Query: 183 YVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWT- 241
Y+APE+L +G G D++S G+ + + P+ ++++ +G Y P++T
Sbjct: 222 YMAPELL--QGSYGTAADVFSLGLTILEVACN---MELPHGGEGWQQLRQG-YLPPEFTA 275
Query: 242 --SPDLKWFIGRLLDTDPATRITVDEILRDPWFKK 274
S +L+ + +L+ DP R T + +L P ++
Sbjct: 276 GLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ +++ S+
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 214
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL+ D +H G ++A E L + +
Sbjct: 215 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-VHNKTGAKLPVKWMALESLQTQKF 273
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 274 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 322
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ ++Y S+
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 153
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL A + +H G ++A E L + +
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 212
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 213 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 261
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ ++Y S+
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL A + +H G ++A E L + +
Sbjct: 151 HRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 209
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 210 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 258
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ ++Y S+
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 147
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL A + +H G ++A E L + +
Sbjct: 148 HRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 206
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 207 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 255
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ ++Y S+
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL A + +H G ++A E L + +
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 213
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 214 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 262
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ ++Y S+
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 152
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL A + +H G ++A E L + +
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 211
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 212 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 260
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ ++Y S+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL A + +H G ++A E L + +
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 214
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 215 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 263
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 77/207 (37%), Gaps = 42/207 (20%)
Query: 118 RRYFQQLISAVEYCHSRGVFHRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT 176
R Y +L+ A++YCHS+G+ HRD + D+GL+ E P +
Sbjct: 135 RFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA---EFYHPAQEYNV 191
Query: 177 LCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMAM----- 226
+ + PE+L +DMWS G +L + PF N L+ +
Sbjct: 192 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG 251
Query: 227 ------YRKIYK-----------GEYRCPKW-----------TSPDLKWFIGRLLDTDPA 258
Y K Y G++ +W SP+ + +LL D
Sbjct: 252 TEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQ 311
Query: 259 TRITVDEILRDPWFKKDYKERKFPHED 285
R+T E + P+F KE+ P D
Sbjct: 312 QRLTAKEAMEHPYFYPVVKEQSQPSAD 338
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 30/280 (10%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMS 71
K +GK +G GAF +V V + +AV+ K+L+ T + + E+ +M
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 72 RL-RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-----FSEQLSR-----RY 120
+ +H NI+ L +Y ++ +A G L + R +S ++R
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 121 FQQLIS-------AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGM 173
F+ L+S +EY S+ HRD I+DFGL+ I D
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI--DYY 213
Query: 174 LHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
T G P ++APE L + Y + D+WS GV+++ + G P+ + +++ +
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 231 YKGE-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
+G P + +L + P+ R T +++ D
Sbjct: 273 KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHG--RNVRTGQS---VAIKAVSKQKILRGGLTA 61
++SRE K + + +G G+F VY G R++ G++ VA+K V++ LR +
Sbjct: 13 EVSRE-----KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-- 65
Query: 62 HVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL---------FAKISKGRF 112
E S+M ++V+L V++ VME G+L A+ + GR
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 113 SEQLSR--RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRP 170
L + ++ + Y +++ HRD I DFG++ ++
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDIXET 183
Query: 171 D-------GMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNA 213
D G+L ++APE L K G DMWS GVVL+ + +
Sbjct: 184 DXXRKGGKGLLPV-----RWMAPESL-KDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22 KIIGCGAFAKVYHGRNV-RTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNIVK 80
++IG G F VYHG + G+ + S +I G + E IM HPN++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 81 LYEV-LATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRR--YFQQLISAVEYCHSRGVF 137
L + L ++ V+ + K G+L I + + + Q+ ++Y S+
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 174
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA---YVAPEILAKKGY 194
HRD ++DFGL A + +H G ++A E L + +
Sbjct: 175 HRDLAARNCMLDEKFTVKVADFGL-ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKF 233
Query: 195 DGAKVDMWSCGVVLF-VLNAGYLPFNDPNL--MAMY----RKIYKGEYRCP 238
K D+WS GV+L+ ++ G P+ D N + +Y R++ + EY CP
Sbjct: 234 T-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY-CP 282
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 125/309 (40%), Gaps = 51/309 (16%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHG--RNVRTGQS---VAIKAVSKQKILRGGLTA 61
++SRE K + + +G G+F VY G R++ G++ VA+K V++ LR +
Sbjct: 10 EVSRE-----KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-- 62
Query: 62 HVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL---------FAKISKGRF 112
E S+M ++V+L V++ VME G+L A+ + GR
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 113 SEQLSR--RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRP 170
L + ++ + Y +++ HRD I DFG++ ++
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDIXET 180
Query: 171 D-------GMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPN 222
D G+L ++APE L K G DMWS GVVL+ + + P+ +
Sbjct: 181 DXXRKGGKGLLPV-----RWMAPESL-KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 234
Query: 223 LMAMYRKIYKGEY-----RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYK 277
+ + + G Y CP+ + DL + +P R T EI+ KD
Sbjct: 235 NEQVLKFVMDGGYLDQPDNCPERVT-DLMRMCWQF---NPKMRPTFLEIVN---LLKDDL 287
Query: 278 ERKFPHEDF 286
FP F
Sbjct: 288 HPSFPEVSF 296
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 125/309 (40%), Gaps = 51/309 (16%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHG--RNVRTGQS---VAIKAVSKQKILRGGLTA 61
++SRE K + + +G G+F VY G R++ G++ VA+K V++ LR +
Sbjct: 13 EVSRE-----KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-- 65
Query: 62 HVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL---------FAKISKGRF 112
E S+M ++V+L V++ VME G+L A+ + GR
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 113 SEQLSR--RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRP 170
L + ++ + Y +++ HRD I DFG++ ++
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDIXET 183
Query: 171 D-------GMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPN 222
D G+L ++APE L K G DMWS GVVL+ + + P+ +
Sbjct: 184 DXXRKGGKGLLPV-----RWMAPESL-KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
Query: 223 LMAMYRKIYKGEY-----RCPKWTSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYK 277
+ + + G Y CP+ + DL + +P R T EI+ KD
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCPERVT-DLMRMCWQF---NPKMRPTFLEIVN---LLKDDL 290
Query: 278 ERKFPHEDF 286
FP F
Sbjct: 291 HPSFPEVSF 299
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 92/233 (39%), Gaps = 44/233 (18%)
Query: 11 EVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIM 70
E+ + +Y +G+ IG G+F +Y G ++ G+ VAIK L T H + I
Sbjct: 2 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-------LECVKTKHPQLHIE-- 52
Query: 71 SRLRHPNIVKLYEVLATKAKI-----------YFVMEFAKGG----ELFAKISKGRFSEQ 115
K+Y+++ I Y VM G +LF S+ +FS +
Sbjct: 53 --------SKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLK 103
Query: 116 LSRRYFQQLISAVEYCHSRGVFHRDXX---XXXXXXXXXXXXXISDFGLS-----AVKEQ 167
Q+IS +EY HS+ HRD I DFGL+ A Q
Sbjct: 104 TVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 163
Query: 168 IRPDGMLHTLCGTPAYVAPEILAKKGYDGAKV-DMWSCGVVLFVLNAGYLPFN 219
P L GT Y + I G + ++ D+ S G VL N G LP+
Sbjct: 164 HIPYRENKNLTGTARYAS--INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 214
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 107/279 (38%), Gaps = 42/279 (15%)
Query: 23 IIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRL-RHPNIVKL 81
+IG G F +V R + G + ++ E+ ++ +L HPNI+ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 82 YEVLATKAKIYFVMEFAKGGELFAKISKGRFSE----------QLSRRYFQQLIS----- 126
+ +Y +E+A G L + K R E S QQL+
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 127 --AVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPA-Y 183
++Y + HR+ I+DFGLS +E + T+ P +
Sbjct: 149 ARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVY----VKKTMGRLPVRW 204
Query: 184 VAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTS 242
+A E L Y D+WS GV+L+ +++ G P+ +Y K+ +G YR K +
Sbjct: 205 MAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLN 262
Query: 243 PDLKWFIGRLLDTDPATRITVDEILRDPWFKKDYKERKF 281
D + V +++R W +K Y+ F
Sbjct: 263 CDDE----------------VYDLMRQCWREKPYERPSF 285
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHG--RNVRTGQS---VAIKAVSKQKILRGGLTA 61
++SRE K + + +G G+F VY G R++ G++ VA+K V++ LR +
Sbjct: 13 EVSRE-----KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-- 65
Query: 62 HVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL---------FAKISKGRF 112
E S+M ++V+L V++ VME G+L A+ + GR
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 113 SEQLSR--RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRP 170
L + ++ + Y +++ HRD I DFG++ ++
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT--RDIYET 183
Query: 171 D-------GMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNA 213
D G+L ++APE L K G DMWS GVVL+ + +
Sbjct: 184 DYYRKGGKGLLPV-----RWMAPESL-KDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 112/293 (38%), Gaps = 43/293 (14%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSR-LRHPNIVKLY 82
+G GA+ V R+V +GQ A+K + + + + ++ I R + P V Y
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRI--RATVNSQEQKRLLXDLDISXRTVDCPFTVTFY 99
Query: 83 EVLATKAKIYFVMEFAKGG-ELFAK--ISKGR-FSEQLSRRYFQQLISAVEYCHSR-GVF 137
L + ++ E + F K I KG+ E + + ++ A+E+ HS+ V
Sbjct: 100 GALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVI 159
Query: 138 HRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPE----ILAKKG 193
HRD DFG+S + D G Y APE L +KG
Sbjct: 160 HRDVKPSNVLINALGQVKXCDFGISGY---LVDDVAKDIDAGCKPYXAPERINPELNQKG 216
Query: 194 YDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYRCPKWTSP--DLKWFIGR 251
Y K D+WS G+ L P++ W +P LK +
Sbjct: 217 Y-SVKSDIWSLGITXIELAILRFPYD-------------------SWGTPFQQLKQVVEE 256
Query: 252 LLDTDPATRITVDEI-LRDPWFKKDYKER-KFP----HEDFDLKDSVGCNVGS 298
PA + + + + KK+ KER +P H F L +S G +V S
Sbjct: 257 PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHESKGTDVAS 309
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++ GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 78
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 79 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 193
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 194 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 30/277 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMSRL- 73
+GK +G GAF +V + + + K+L+ T + + E+ +M +
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-------------FSEQLSRRY 120
+H NI+ L +Y ++E+A G L + R EQLS +
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 121 F----QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT 176
Q+ +EY S+ HRD I+DFGL+ I D T
Sbjct: 141 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI--DYYKKT 198
Query: 177 LCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG 233
G P ++APE L + Y + D+WS GV+L+ + G P+ + +++ + +G
Sbjct: 199 TNGRLPVKWMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 257
Query: 234 E-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
P + +L + P+ R T +++ D
Sbjct: 258 HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 294
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++ GAF VY G + G+ V I K+ LR + +EI +M+ + +P+
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREATSPKANKEILDEAYVMASVDNPH 85
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 86 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 200
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 201 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 247
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 20/229 (8%)
Query: 22 KIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREI----SIMSRLRHPN 77
K++G GAF VY G + G+ V I + LR + +EI +M+ + +P+
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIME--LREATSPKANKEILDEAYVMASVDNPH 112
Query: 78 IVKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
+ +L + T + + + + G L + + K Q + Q+ + Y R
Sbjct: 113 VCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 171
Query: 136 VFHRDXXXXXXXXXXXXXXXISDFGLS----AVKEQIRPDGMLHTLCGTPAYVAPEILAK 191
+ HRD I+DFGL+ A +++ +G + ++A E +
Sbjct: 172 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI----KWMALESILH 227
Query: 192 KGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKGEYRCPK 239
+ Y + D+WS GV ++ ++ G P++ + + KGE R P+
Sbjct: 228 RIYT-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQ 274
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 30/277 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMSRL- 73
+GK +G GAF +V + + + K+L+ T + + E+ +M +
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-------------FSEQLSRRY 120
+H NI+ L +Y ++E+A G L + R EQLS +
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 121 F----QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT 176
Q+ +EY S+ HRD I+DFGL+ I D T
Sbjct: 144 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI--DYYKKT 201
Query: 177 LCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG 233
G P ++APE L + Y + D+WS GV+L+ + G P+ + +++ + +G
Sbjct: 202 TNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 260
Query: 234 E-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
P + +L + P+ R T +++ D
Sbjct: 261 HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 297
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 30/277 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMSRL- 73
+GK +G GAF +V + + + K+L+ T + + E+ +M +
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-------------FSEQLSRRY 120
+H NI+ L +Y ++E+A G L + R EQLS +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 121 F----QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT 176
Q+ +EY S+ HRD I+DFGL+ I D T
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI--DYYKKT 194
Query: 177 LCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG 233
G P ++APE L + Y + D+WS GV+L+ + G P+ + +++ + +G
Sbjct: 195 TNGRLPVKWMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 253
Query: 234 E-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
P + +L + P+ R T +++ D
Sbjct: 254 HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 104/252 (41%), Gaps = 25/252 (9%)
Query: 24 IGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHV-KREISIMSRLRHPNIVKLY 82
+G G F +V+ G T + VAIK + G ++ +E +M +LRH +V+LY
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-VAIKTLKP-----GTMSPEAFLQEAQVMKKLRHEKLVQLY 69
Query: 83 EVLATKAKIYFVMEFAKGGEL--FAKISKGRFSE--QLSRRYFQQLISAVEYCHSRGVFH 138
V+ ++ I V E+ G L F K G++ QL Q+ S + Y H
Sbjct: 70 AVV-SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLV-DMAAQIASGMAYVERMNYVH 127
Query: 139 RDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTP---AYVAPEILAKKGYD 195
RD ++DFGL+ + E D G + APE A G
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIE----DNEXTARQGAKFPIKWTAPEA-ALYGRF 182
Query: 196 GAKVDMWSCGVVLFVLNA-GYLPFNDPNLMAMYRKIYKGEYR--CPKWTSPDLKWFIGRL 252
K D+WS G++L L G +P+ + ++ +G YR CP L + +
Sbjct: 183 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPESLHDLMCQC 241
Query: 253 LDTDPATRITVD 264
+P R T +
Sbjct: 242 WRKEPEERPTFE 253
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 30/277 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMSRL- 73
+GK +G GAF +V + + + K+L+ T + + E+ +M +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-------------FSEQLSRRY 120
+H NI+ L +Y ++E+A G L + R EQLS +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 121 F----QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT 176
Q+ +EY S+ HRD I+DFGL+ I D T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI--DYYKKT 209
Query: 177 LCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG 233
G P ++APE L + Y + D+WS GV+L+ + G P+ + +++ + +G
Sbjct: 210 TNGRLPVKWMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 234 E-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
P + +L + P+ R T +++ D
Sbjct: 269 HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 30/277 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMSRL- 73
+GK +G GAF +V + + + K+L+ T + + E+ +M +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-------------FSEQLSRRY 120
+H NI+ L +Y ++E+A G L + R EQLS +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 121 F----QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT 176
Q+ +EY S+ HRD I+DFGL+ I D T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI--DYYKKT 209
Query: 177 LCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG 233
G P ++APE L + Y + D+WS GV+L+ + G P+ + +++ + +G
Sbjct: 210 TNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 234 E-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
P + +L + P+ R T +++ D
Sbjct: 269 HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 34/228 (14%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHG--RNVRTGQS---VAIKAVSKQKILRGGLTA 61
++SRE K + + +G G+F VY G R++ G++ VA+K V++ LR +
Sbjct: 13 EVSRE-----KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-- 65
Query: 62 HVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL---------FAKISKGRF 112
E S+M ++V+L V++ VME G+L A+ + GR
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 113 SEQLSR--RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS-----AVK 165
L + ++ + Y +++ HRD I DFG++
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAY 185
Query: 166 EQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNA 213
+ G+L ++APE L K G DMWS GVVL+ + +
Sbjct: 186 YRKGGKGLLPV-----RWMAPESL-KDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 30/277 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMSRL- 73
+GK +G GAF +V + + + K+L+ T + + E+ +M +
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-------------FSEQLSRRY 120
+H NI+ L +Y ++E+A G L + R EQLS +
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 121 F----QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT 176
Q+ +EY S+ HRD I+DFGL+ I D T
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI--DYYKKT 202
Query: 177 LCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG 233
G P ++APE L + Y + D+WS GV+L+ + G P+ + +++ + +G
Sbjct: 203 TNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 261
Query: 234 E-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
P + +L + P+ R T +++ D
Sbjct: 262 HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 298
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 30/277 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMSRL- 73
+GK +G GAF +V + + + K+L+ T + + E+ +M +
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGR-------------FSEQLSRRY 120
+H NI+ L +Y ++E+A G L + R EQLS +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 121 F----QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT 176
Q+ +EY S+ HRD I+DFGL+ I D T
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI--DYYKKT 250
Query: 177 LCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG 233
G P ++APE L + Y + D+WS GV+L+ + G P+ + +++ + +G
Sbjct: 251 TNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 309
Query: 234 E-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
P + +L + P+ R T +++ D
Sbjct: 310 HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 110/306 (35%), Gaps = 71/306 (23%)
Query: 18 YEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKI------------LRGGLTAHVKR 65
Y++ + +G G +++V+ N+ + VA+K + K LRGG
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGG------- 91
Query: 66 EISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLI 125
PNI+ L +++ + F K ++ R Y +++
Sbjct: 92 ----------PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEIL 141
Query: 126 SAVEYCHSRGVFHRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYV 184
A++YCHS G+ HRD + D+GL+ E P + + +
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA---EFYHPGQEYNVRVASRYFK 198
Query: 185 APEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMA---------MYRKI 230
PE+L +DMWS G +L + PF N L+ +Y I
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 258
Query: 231 YK-------------GEYRCPKW-----------TSPDLKWFIGRLLDTDPATRITVDEI 266
K G + +W SP+ F+ +LL D +R+T E
Sbjct: 259 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 267 LRDPWF 272
+ P+F
Sbjct: 319 MEHPYF 324
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 50/134 (37%), Gaps = 27/134 (20%)
Query: 112 FSEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXX-XXXXXXXXXXISDFGLS-------- 162
S Q R Y L A++ H G+ HRD + DFGL+
Sbjct: 114 LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173
Query: 163 -------AVKEQIRPDGMLHTLC-----------GTPAYVAPEILAKKGYDGAKVDMWSC 204
+ +Q R ++C GTP + APE+L K +DMWS
Sbjct: 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSA 233
Query: 205 GVVLFVLNAGYLPF 218
GV+ L +G PF
Sbjct: 234 GVIFLSLLSGRYPF 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 30/277 (10%)
Query: 20 VGKIIGCGAFAKVYHGRNVRTGQSVAIKAVS-KQKILRGGLT----AHVKREISIMSRL- 73
+GK +G GAF +V + + + K+L+ T + + E+ +M +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 74 RHPNIVKLYEVLATKAKIYFVMEFAKGGEL-------------FAKISKGRFSEQLSRRY 120
+H NI+ L +Y ++E+A G L ++ EQLS +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 121 F----QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT 176
Q+ +EY S+ HRD I+DFGL+ I D T
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI--DYYKKT 209
Query: 177 LCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKIYKG 233
G P ++APE L + Y + D+WS GV+L+ + G P+ + +++ + +G
Sbjct: 210 TNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 234 E-YRCPKWTSPDLKWFIGRLLDTDPATRITVDEILRD 269
P + +L + P+ R T +++ D
Sbjct: 269 HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 90/249 (36%), Gaps = 42/249 (16%)
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
PNI+ L +++ + F K ++ R Y +++ A++YCHS G
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 136 VFHRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
+ HRD + D+GL+ E P + + + PE+L
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLA---EFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMA---------MYRKIYK-------- 232
+DMWS G +L + PF N L+ +Y I K
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 233 -----GEYRCPKW-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWFKKDY 276
G + +W SP+ F+ +LL D +R+T E + P+F
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYPVV 328
Query: 277 KERKFPHED 285
KE+ P D
Sbjct: 329 KEQSQPCAD 337
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHG--RNVRTGQS---VAIKAVSKQKILRGGLTA 61
++SRE K + + +G G+F VY G R++ G++ VA+K V++ LR +
Sbjct: 14 EVSRE-----KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-- 66
Query: 62 HVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL---------FAKISKGRF 112
E S+M ++V+L V++ VME G+L A+ + GR
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 113 SEQLSR--RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRP 170
L + ++ + Y +++ HR+ I DFG++ ++
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT--RDIYET 184
Query: 171 D-------GMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNA 213
D G+L ++APE L K G DMWS GVVL+ + +
Sbjct: 185 DYYRKGGKGLLPV-----RWMAPESL-KDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 7 DISREVNLFGKYEVGKIIGCGAFAKVYHG--RNVRTGQS---VAIKAVSKQKILRGGLTA 61
++SRE K + + +G G+F VY G R++ G++ VA+K V++ LR +
Sbjct: 13 EVSRE-----KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-- 65
Query: 62 HVKREISIMSRLRHPNIVKLYEVLATKAKIYFVMEFAKGGEL---------FAKISKGRF 112
E S+M ++V+L V++ VME G+L A+ + GR
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 113 SEQLSR--RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRP 170
L + ++ + Y +++ HR+ I DFG++ ++
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT--RDIYET 183
Query: 171 D-------GMLHTLCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNA 213
D G+L ++APE L K G DMWS GVVL+ + +
Sbjct: 184 DYYRKGGKGLLPV-----RWMAPESL-KDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 22/213 (10%)
Query: 24 IGCGAFAKVYHGR-----NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
+G GAF +VY G+ N + VA+K + + + L + E I+S+L H NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIISKLNHQNI 96
Query: 79 VKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISA------VEY 130
V+ V + ++E GG+L F + ++ R S+ S L A +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 131 CHSRGVFHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGT-PAYVAP 186
HRD I DFG++ ++ R C P P
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--RDIYRASYYRKGGCAMLPVKWMP 214
Query: 187 EILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
+G +K D WS GV+L+ + + GY+P+
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 87/221 (39%), Gaps = 33/221 (14%)
Query: 24 IGCGAFAKV-----YHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
+G GAF KV Y+ + VA+KA+ + +RE +++ L+H +I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL---AARKDFQREAELLTNLQHEHI 79
Query: 79 VKLYEVLATKAKIYFVMEFAKGGEL-----------------FAKISKGRFSEQLSRRYF 121
VK Y V + V E+ K G+L + +KG
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 122 QQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLS---AVKEQIRPDGMLHTLC 178
Q+ S + Y S+ HRD I DFG+S + R G HT+
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGG--HTML 197
Query: 179 GTPAYVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
++ PE + + + + D+WS GV+L+ + G P+
Sbjct: 198 PI-RWMPPESIMYRKFT-TESDVWSFGVILWEIFTYGKQPW 236
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 22/213 (10%)
Query: 24 IGCGAFAKVYHGR-----NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
+G GAF +VY G+ N + VA+K + + + L + E I+S+L H NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIISKLNHQNI 110
Query: 79 VKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISA------VEY 130
V+ V + ++E GG+L F + ++ R S+ S L A +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 131 CHSRGVFHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGT-PAYVAP 186
HRD I DFG++ ++ R C P P
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--RDIYRASYYRKGGCAMLPVKWMP 228
Query: 187 EILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
+G +K D WS GV+L+ + + GY+P+
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 75/201 (37%), Gaps = 42/201 (20%)
Query: 118 RRYFQQLISAVEYCHSRGVFHRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHT 176
R Y +L+ A++YCHS+G+ HRD + D+GL+ E P +
Sbjct: 140 RFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA---EFYHPAQEYNV 196
Query: 177 LCGTPAYVAPEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMAM----- 226
+ + PE+L +DMWS G +L + PF N L+ +
Sbjct: 197 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG 256
Query: 227 ------YRKIYK-----------GEYRCPKW-----------TSPDLKWFIGRLLDTDPA 258
Y K Y G++ +W SP+ + +LL D
Sbjct: 257 TEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQ 316
Query: 259 TRITVDEILRDPWFKKDYKER 279
R+T E + P+F KE+
Sbjct: 317 QRLTAKEAMEHPYFYPVVKEQ 337
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 20/225 (8%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YE+ +IG G+F +V + + VAIK + +K V R + +M+ +H
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEV-RLLELMN--KHD 92
Query: 77 NIVKLYEVLATKAKIY-------FVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVE 129
+K Y V + ++ F M +L + S L+R++ QQ+ +A+
Sbjct: 93 TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 152
Query: 130 YCHS--RGVFHRDXXXXXXXXXXXXXXXIS--DFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
+ + + H D I DFG S Q ++ + Y +
Sbjct: 153 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQXIQSRFYRS 207
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI 230
PE+L YD A +DMWS G +L ++ G F+ N + KI
Sbjct: 208 PEVLLGMPYDLA-IDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 251
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 86/236 (36%), Gaps = 42/236 (17%)
Query: 76 PNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVEYCHSRG 135
PNI+ L +++ + F K + ++ R Y +++ A++YCHS G
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 136 VFHRDXX-XXXXXXXXXXXXXISDFGLSAVKEQIRPDGMLHTLCGTPAYVAPEILAKKGY 194
+ HRD + D+GL+ E P + + + PE+L
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLA---EFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 195 DGAKVDMWSCGVVLFVLNAGYLPF-----NDPNLMA---------MYRKIYK-------- 232
+DMWS G +L + PF N L+ +Y I K
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 268
Query: 233 -----GEYRCPKW-----------TSPDLKWFIGRLLDTDPATRITVDEILRDPWF 272
G + +W SP+ F+ +LL D +R+T E + P+F
Sbjct: 269 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 22/213 (10%)
Query: 24 IGCGAFAKVYHGR-----NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
+G GAF +VY G+ N + VA+K + + + L + E I+S+ H NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIISKFNHQNI 110
Query: 79 VKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISA------VEY 130
V+ V + +ME GG+L F + ++ R S+ S L A +Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 131 CHSRGVFHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGT-PAYVAP 186
HRD I DFG++ ++ R C P P
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--RDIYRASYYRKGGCAMLPVKWMP 228
Query: 187 EILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
+G +K D WS GV+L+ + + GY+P+
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 22/213 (10%)
Query: 24 IGCGAFAKVYHGR-----NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
+G GAF +VY G+ N + VA+K + + + L + E I+S+ H NI
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIISKFNHQNI 95
Query: 79 VKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISA------VEY 130
V+ V + +ME GG+L F + ++ R S+ S L A +Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 131 CHSRGVFHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGT-PAYVAP 186
HRD I DFG++ ++ R C P P
Sbjct: 156 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--RDIYRASYYRKGGCAMLPVKWMP 213
Query: 187 EILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
+G +K D WS GV+L+ + + GY+P+
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 20/225 (8%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YE+ +IG G+F +V + + VAIK + +K V R + +M+ +H
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEV-RLLELMN--KHD 111
Query: 77 NIVKLYEVLATKAKIY-------FVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVE 129
+K Y V + ++ F M +L + S L+R++ QQ+ +A+
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 130 YCHS--RGVFHRDXXXXXXXXXXXXXXXIS--DFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
+ + + H D I DFG S Q ++ + Y +
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ-----RIYQXIQSRFYRS 226
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI 230
PE+L YD A +DMWS G +L ++ G F+ N + KI
Sbjct: 227 PEVLLGMPYDLA-IDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 20/225 (8%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHP 76
+YE+ +IG G+F +V + + VAIK + +K V R + +M+ +H
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEV-RLLELMN--KHD 111
Query: 77 NIVKLYEVLATKAKIY-------FVMEFAKGGELFAKISKGRFSEQLSRRYFQQLISAVE 129
+K Y V + ++ F M +L + S L+R++ QQ+ +A+
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 130 YCHS--RGVFHRDXXXXXXXXXXXXXXXIS--DFGLSAVKEQIRPDGMLHTLCGTPAYVA 185
+ + + H D I DFG S Q ++ + Y +
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQ-----RIYQXIQSRFYRS 226
Query: 186 PEILAKKGYDGAKVDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKI 230
PE+L YD A +DMWS G +L ++ G F+ N + KI
Sbjct: 227 PEVLLGMPYDLA-IDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 180 TPAYVAPEILAKKGYDGAK--VDMWSCGVVLFVLNAGYLPFNDPNLMAMYRKIYKGEYR- 236
PA+VAPE L KK D + DMWS V+L+ L +PF D + M + K+ R
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP 230
Query: 237 -CPKWTSPDLKWFIGRLLDTDPATRITVDEIL 267
P SP + + ++ DPA R D I+
Sbjct: 231 TIPPGISPHVSKLMKICMNEDPAKRPKFDMIV 262
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 96/235 (40%), Gaps = 44/235 (18%)
Query: 20 VGKIIGCGAFAKV-----YHGRNVRTGQSVAIKAVSKQKI---LRGGLTAHVKREISIMS 71
+GK +G G F KV +H + +VA+K + + LR L+ E +++
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLS-----EFNVLK 81
Query: 72 RLRHPNIVKLYEVLATKAKIYFVMEFAKGGELFA------KISKGRFSEQLSR------- 118
++ HP+++KLY + + ++E+AK G L K+ G SR
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 119 ------------RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKE 166
+ Q+ ++Y + HRD ISDFGLS ++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLS--RD 199
Query: 167 QIRPDGMLHTLCG-TPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
D + G P ++A E L Y + D+WS GV+L+ ++ G P+
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 111/284 (39%), Gaps = 39/284 (13%)
Query: 17 KYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR-- 74
+ GK +G GAF KV +S A V+ K+L+ +AH+ ++MS L+
Sbjct: 40 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVA-VKMLKP--SAHLTEREALMSELKVL 96
Query: 75 -----HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSR----------- 118
H NIV L + E+ G+L + + R S S+
Sbjct: 97 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 156
Query: 119 --------RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRP 170
+ Q+ + + S+ HRD I DFGL+ I+
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA---RDIKN 213
Query: 171 DG--MLHTLCGTPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAM 226
D ++ P ++APE + Y + D+WS G+ L+ + + G P+ + +
Sbjct: 214 DSNYVVKGNARLPVKWMAPESIFNCVYT-FESDVWSYGIFLWELFSLGSSPYPGMPVDSK 272
Query: 227 YRKIYKGEYR--CPKWTSPDLKWFIGRLLDTDPATRITVDEILR 268
+ K+ K +R P+ ++ + D DP R T +I++
Sbjct: 273 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 22/213 (10%)
Query: 24 IGCGAFAKVYHGR-----NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
+G GAF +VY G+ N + VA+K + + + L + E I+S+ H NI
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIISKFNHQNI 102
Query: 79 VKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISA------VEY 130
V+ V + ++E GG+L F + ++ R S+ S L A +Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 131 CHSRGVFHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGT-PAYVAP 186
HRD I DFG++ ++ R C P P
Sbjct: 163 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--RDIYRASYYRKGGCAMLPVKWMP 220
Query: 187 EILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
+G +K D WS GV+L+ + + GY+P+
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 253
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 110/280 (39%), Gaps = 39/280 (13%)
Query: 21 GKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLR------ 74
GK +G GAF KV +S A V+ K+L+ +AH+ ++MS L+
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVA-VKMLKP--SAHLTEREALMSELKVLSYLG 107
Query: 75 -HPNIVKLYEVLATKAKIYFVMEFAKGGELFAKISKGRFSEQLSR--------------- 118
H NIV L + E+ G+L + + R S S+
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 119 ----RYFQQLISAVEYCHSRGVFHRDXXXXXXXXXXXXXXXISDFGLSAVKEQIRPDG-- 172
+ Q+ + + S+ HRD I DFGL+ I+ D
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA---RHIKNDSNY 224
Query: 173 MLHTLCGTPA-YVAPEILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPFNDPNLMAMYRKI 230
++ P ++APE + Y + D+WS G+ L+ + + G P+ + + + K+
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYT-FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
Query: 231 YKGEYR--CPKWTSPDLKWFIGRLLDTDPATRITVDEILR 268
K +R P+ ++ + D DP R T +I++
Sbjct: 284 IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 22/213 (10%)
Query: 24 IGCGAFAKVYHGR-----NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
+G GAF +VY G+ N + VA+K + + + L + E I+S+ H NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIISKFNHQNI 96
Query: 79 VKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISA------VEY 130
V+ V + ++E GG+L F + ++ R S+ S L A +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 131 CHSRGVFHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGT-PAYVAP 186
HRD I DFG++ ++ R C P P
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--RDIYRASYYRKGGCAMLPVKWMP 214
Query: 187 EILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
+G +K D WS GV+L+ + + GY+P+
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 22/213 (10%)
Query: 24 IGCGAFAKVYHGR-----NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
+G GAF +VY G+ N + VA+K + + + L + E I+S+ H NI
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM--EALIISKFNHQNI 110
Query: 79 VKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISA------VEY 130
V+ V + ++E GG+L F + ++ R S+ S L A +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 131 CHSRGVFHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGT-PAYVAP 186
HRD I DFG++ ++ R C P P
Sbjct: 171 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--RDIYRASYYRKGGCAMLPVKWMP 228
Query: 187 EILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
+G +K D WS GV+L+ + + GY+P+
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 91/236 (38%), Gaps = 50/236 (21%)
Query: 11 EVNLFGKYEVGKIIGCGAFAKVYHGRNVRTGQSVAIKAVSKQKILRGGLTAHVKREISIM 70
E + K+ +G+ IG G+F ++Y G N++T + VAIK +VK
Sbjct: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVK------ 43
Query: 71 SRLRHPNIV---KLYEVLATKAKIYFVMEFAKGG---------------ELFAKISKGRF 112
+HP ++ K+Y +L I V F G +LF S+ +
Sbjct: 44 --TKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSR-KL 100
Query: 113 SEQLSRRYFQQLISAVEYCHSRGVFHRDXXXXXXXX---XXXXXXXISDFGLS-----AV 164
S + Q+I+ VE+ HS+ HRD I DFGL+
Sbjct: 101 SLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160
Query: 165 KEQIRPDGMLHTLCGTPAYVAPEILAKKGYDGAKV-DMWSCGVVLFVLNAGYLPFN 219
Q P L GT Y + + G + ++ D+ S G VL G LP+
Sbjct: 161 THQHIPYRENKNLTGTARYAS--VNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 22/213 (10%)
Query: 24 IGCGAFAKVYHGR-----NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
+G GAF +VY G+ N + VA+K + + + L + E I+S+ H NI
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIISKFNHQNI 112
Query: 79 VKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISA------VEY 130
V+ V + ++E GG+L F + ++ R S+ S L A +Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 131 CHSRGVFHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGT-PAYVAP 186
HRD I DFG++ ++ R C P P
Sbjct: 173 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--RDIYRASYYRKGGCAMLPVKWMP 230
Query: 187 EILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
+G +K D WS GV+L+ + + GY+P+
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 263
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 22/213 (10%)
Query: 24 IGCGAFAKVYHGR-----NVRTGQSVAIKAVSKQKILRGGLTAHVKREISIMSRLRHPNI 78
+G GAF +VY G+ N + VA+K + + + L + E I+S+ H NI
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM--EALIISKFNHQNI 96
Query: 79 VKLYEVLATKAKIYFVMEFAKGGEL--FAKISKGRFSEQLSRRYFQQLISA------VEY 130
V+ V + ++E GG+L F + ++ R S+ S L A +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 131 CHSRGVFHRDXXXXXXXXXXX---XXXXISDFGLSAVKEQIRPDGMLHTLCGT-PAYVAP 186
HRD I DFG++ ++ R C P P
Sbjct: 157 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA--QDIYRASYYRKGGCAMLPVKWMP 214
Query: 187 EILAKKGYDGAKVDMWSCGVVLF-VLNAGYLPF 218
+G +K D WS GV+L+ + + GY+P+
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,475,124
Number of Sequences: 62578
Number of extensions: 520330
Number of successful extensions: 4769
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 367
Number of HSP's that attempted gapping in prelim test: 1520
Number of HSP's gapped (non-prelim): 1241
length of query: 417
length of database: 14,973,337
effective HSP length: 101
effective length of query: 316
effective length of database: 8,652,959
effective search space: 2734335044
effective search space used: 2734335044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)