Query 014850
Match_columns 417
No_of_seqs 182 out of 1502
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 09:07:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014850.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014850hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02436 cellulose synthase A 100.0 1.1E-96 2E-101 795.5 34.3 412 1-414 499-979 (1094)
2 PF03552 Cellulose_synt: Cellu 100.0 8.6E-98 2E-102 785.0 24.7 410 1-412 133-607 (720)
3 PLN02638 cellulose synthase A 100.0 3.8E-97 8E-102 801.7 29.9 412 1-414 483-963 (1079)
4 PLN02195 cellulose synthase A 100.0 4.2E-96 9E-101 788.0 34.2 411 1-413 386-859 (977)
5 PLN02400 cellulose synthase 100.0 1.6E-96 4E-101 797.1 29.6 411 1-413 490-967 (1085)
6 PLN02189 cellulose synthase 100.0 5.4E-96 1E-100 790.7 32.0 412 1-414 465-925 (1040)
7 PLN02190 cellulose synthase-li 100.0 2E-95 4E-100 768.8 31.3 407 2-412 221-640 (756)
8 PLN02915 cellulose synthase A 100.0 5E-95 1.1E-99 783.4 34.4 411 1-413 421-926 (1044)
9 PLN02248 cellulose synthase-li 100.0 2.8E-93 6.1E-98 771.0 32.1 405 6-414 543-1020(1135)
10 PLN02893 Cellulose synthase-li 100.0 1.2E-92 2.6E-97 751.2 35.1 391 1-413 230-630 (734)
11 PRK11498 bcsA cellulose syntha 100.0 1.8E-48 4E-53 425.0 32.0 313 8-416 284-616 (852)
12 TIGR03030 CelA cellulose synth 100.0 1.8E-47 3.9E-52 416.9 33.5 312 8-415 155-504 (713)
13 PRK05454 glucosyltransferase M 100.0 2.4E-32 5.1E-37 294.9 33.1 237 8-322 152-415 (691)
14 PRK14583 hmsR N-glycosyltransf 100.0 3.6E-30 7.8E-35 267.3 30.8 193 8-284 98-308 (444)
15 cd04191 Glucan_BSP_ModH Glucan 100.0 1.1E-31 2.4E-36 259.3 17.3 178 30-278 66-253 (254)
16 PRK11204 N-glycosyltransferase 100.0 4.4E-28 9.5E-33 249.2 31.1 192 8-283 77-286 (420)
17 COG1215 Glycosyltransferases, 100.0 2.1E-27 4.5E-32 244.0 21.0 193 7-282 77-290 (439)
18 TIGR03111 glyc2_xrt_Gpos1 puta 99.9 7.2E-26 1.6E-30 234.9 28.1 237 8-331 72-338 (439)
19 PRK14716 bacteriophage N4 adso 99.9 1.8E-25 3.9E-30 234.1 28.3 224 8-307 90-354 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 99.9 7.8E-24 1.7E-28 199.7 16.5 184 8-276 24-232 (232)
21 PRK11234 nfrB bacteriophage N4 99.9 1.7E-22 3.7E-27 219.6 27.3 200 9-282 88-335 (727)
22 cd06435 CESA_NdvC_like NdvC_li 99.9 2.6E-22 5.7E-27 189.2 18.1 193 8-282 22-234 (236)
23 cd06421 CESA_CelA_like CESA_Ce 99.9 1.5E-22 3.3E-27 189.6 14.7 188 9-279 26-233 (234)
24 cd06427 CESA_like_2 CESA_like_ 99.9 2.6E-22 5.7E-27 190.9 16.2 191 8-282 24-236 (241)
25 PF13641 Glyco_tranf_2_3: Glyc 99.9 4.3E-23 9.3E-28 193.3 3.5 185 8-275 24-228 (228)
26 PRK15489 nfrB bacteriophage N4 99.9 1E-19 2.3E-24 196.1 27.0 200 8-281 95-342 (703)
27 COG2943 MdoH Membrane glycosyl 99.9 1.3E-19 2.9E-24 184.0 25.4 220 29-326 210-439 (736)
28 TIGR03472 HpnI hopanoid biosyn 99.8 7.1E-19 1.5E-23 178.9 24.5 188 7-276 63-272 (373)
29 cd04190 Chitin_synth_C C-termi 99.8 3.2E-20 6.9E-25 177.7 12.3 168 52-278 64-243 (244)
30 PF13632 Glyco_trans_2_3: Glyc 99.8 3.7E-19 8E-24 163.2 14.6 133 68-276 1-143 (193)
31 cd04192 GT_2_like_e Subfamily 99.8 1.3E-18 2.7E-23 162.0 15.4 186 8-275 20-229 (229)
32 cd02520 Glucosylceramide_synth 99.8 6.5E-19 1.4E-23 162.4 12.3 159 8-275 24-195 (196)
33 cd06434 GT2_HAS Hyaluronan syn 99.8 2.2E-18 4.8E-23 161.9 13.6 190 13-278 28-234 (235)
34 cd06439 CESA_like_1 CESA_like_ 99.7 1.6E-16 3.5E-21 151.0 15.7 182 9-278 53-250 (251)
35 TIGR03469 HonB hopene-associat 99.6 9.4E-14 2E-18 141.9 25.9 191 8-274 63-280 (384)
36 cd02525 Succinoglycan_BP_ExoA 99.6 4.9E-15 1.1E-19 139.5 15.2 188 9-282 24-233 (249)
37 PF13506 Glyco_transf_21: Glyc 99.6 4.3E-15 9.3E-20 136.0 12.9 158 35-274 6-175 (175)
38 cd06436 GlcNAc-1-P_transferase 99.5 9.4E-14 2E-18 127.8 13.3 133 10-149 22-177 (191)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.3 1.7E-11 3.7E-16 112.2 11.2 88 9-109 26-123 (202)
40 cd06438 EpsO_like EpsO protein 99.3 1.8E-11 3.8E-16 111.5 9.2 131 8-148 20-168 (183)
41 cd04195 GT2_AmsE_like GT2_AmsE 99.2 6.9E-11 1.5E-15 108.2 11.2 88 9-110 24-121 (201)
42 cd02526 GT2_RfbF_like RfbF is 99.2 1.8E-10 3.8E-15 108.3 10.2 84 14-108 25-116 (237)
43 cd02510 pp-GalNAc-T pp-GalNAc- 99.1 1.4E-09 3.1E-14 106.9 14.6 68 15-92 32-109 (299)
44 PF03142 Chitin_synth_2: Chiti 99.1 5.3E-09 1.2E-13 110.1 19.2 164 64-280 200-378 (527)
45 cd06433 GT_2_WfgS_like WfgS an 99.1 6.5E-10 1.4E-14 100.5 10.3 128 8-148 21-155 (202)
46 cd04186 GT_2_like_c Subfamily 99.1 1.6E-09 3.5E-14 95.0 11.4 95 13-148 26-125 (166)
47 TIGR01556 rhamnosyltran L-rham 99.0 3.6E-09 7.7E-14 103.0 13.7 80 15-104 23-109 (281)
48 cd02522 GT_2_like_a GT_2_like_ 99.0 9.6E-09 2.1E-13 95.3 14.5 68 13-92 28-98 (221)
49 cd06442 DPM1_like DPM1_like re 99.0 5.7E-09 1.2E-13 97.0 12.4 72 12-93 26-105 (224)
50 cd04196 GT_2_like_d Subfamily 99.0 7.9E-09 1.7E-13 94.9 12.3 89 9-110 22-120 (214)
51 cd06420 GT2_Chondriotin_Pol_N 98.9 1.3E-08 2.9E-13 91.4 12.9 70 13-91 26-104 (182)
52 cd04185 GT_2_like_b Subfamily 98.9 1.9E-08 4.1E-13 92.3 14.0 84 9-104 21-113 (202)
53 PLN02726 dolichyl-phosphate be 98.9 3.5E-08 7.5E-13 94.1 13.2 80 13-106 40-129 (243)
54 KOG2571 Chitin synthase/hyalur 98.8 5.1E-08 1.1E-12 106.5 13.2 161 49-275 426-596 (862)
55 cd06913 beta3GnTL1_like Beta 1 98.8 1.4E-07 3E-12 88.1 13.9 78 9-92 21-110 (219)
56 cd06423 CESA_like CESA_like is 98.7 3.3E-08 7.1E-13 86.1 7.4 83 13-108 26-117 (180)
57 PF10111 Glyco_tranf_2_2: Glyc 98.7 2.4E-07 5.3E-12 90.8 12.5 71 12-89 32-111 (281)
58 cd04188 DPG_synthase DPG_synth 98.6 3.8E-07 8.3E-12 84.6 12.4 70 13-92 30-108 (211)
59 PF00535 Glycos_transf_2: Glyc 98.6 6.2E-08 1.3E-12 84.3 5.8 127 11-149 25-167 (169)
60 PRK10073 putative glycosyl tra 98.5 7.5E-07 1.6E-11 89.4 12.6 73 9-92 30-111 (328)
61 PRK10018 putative glycosyl tra 98.5 1.9E-06 4E-11 84.8 13.4 82 9-103 29-119 (279)
62 COG1216 Predicted glycosyltran 98.5 9.2E-07 2E-11 87.6 10.6 92 8-110 26-125 (305)
63 cd04187 DPM1_like_bac Bacteria 98.4 2.2E-06 4.8E-11 77.3 11.1 123 13-150 29-162 (181)
64 cd04179 DPM_DPG-synthase_like 98.4 1.5E-06 3.3E-11 78.0 9.1 85 12-110 27-119 (185)
65 cd00761 Glyco_tranf_GTA_type G 98.3 5.6E-06 1.2E-10 70.1 10.4 79 13-104 26-112 (156)
66 PRK10063 putative glycosyl tra 98.2 1.6E-05 3.5E-10 76.6 13.2 62 14-86 34-102 (248)
67 PTZ00260 dolichyl-phosphate be 97.9 0.00029 6.3E-09 70.9 14.2 82 13-105 107-200 (333)
68 KOG2547 Ceramide glucosyltrans 97.7 3.9E-05 8.4E-10 76.7 4.7 193 7-274 108-314 (431)
69 PRK10714 undecaprenyl phosphat 97.7 0.015 3.2E-07 58.4 22.8 70 13-92 38-116 (325)
70 PRK13915 putative glucosyl-3-p 97.5 0.00029 6.4E-09 70.1 7.9 86 12-105 61-152 (306)
71 cd02511 Beta4Glucosyltransfera 96.7 0.0056 1.2E-07 57.8 7.9 68 14-92 27-97 (229)
72 COG0463 WcaA Glycosyltransfera 95.1 0.076 1.7E-06 45.8 7.1 68 8-85 26-102 (291)
73 KOG2978 Dolichol-phosphate man 94.3 0.24 5.2E-06 45.9 8.4 77 13-103 35-121 (238)
74 cd02514 GT13_GLCNAC-TI GT13_GL 90.8 1.5 3.2E-05 44.4 9.4 46 52-105 88-136 (334)
75 cd00899 b4GalT Beta-4-Galactos 90.2 0.88 1.9E-05 43.3 6.8 50 32-85 36-85 (219)
76 PF13712 Glyco_tranf_2_5: Glyc 89.7 0.63 1.4E-05 44.0 5.5 60 32-103 30-89 (217)
77 KOG2977 Glycosyltransferase [G 83.0 4.3 9.2E-05 40.1 7.2 68 15-91 106-185 (323)
78 PF02364 Glucan_synthase: 1,3- 82.2 13 0.00029 41.7 11.5 75 225-305 408-483 (817)
79 PF13704 Glyco_tranf_2_4: Glyc 79.3 2.6 5.6E-05 33.9 3.8 59 16-78 22-84 (97)
80 PF13896 Glyco_transf_49: Glyc 73.5 4.4 9.6E-05 40.6 4.4 40 63-103 125-164 (317)
81 PF02709 Glyco_transf_7C: N-te 59.8 12 0.00027 29.5 3.5 28 221-248 36-66 (78)
82 PRK09382 ispDF bifunctional 2- 45.7 58 0.0013 33.5 6.8 40 49-92 83-122 (378)
83 cd02540 GT2_GlmU_N_bac N-termi 35.9 2E+02 0.0044 26.3 8.4 53 32-92 63-116 (229)
84 PF04724 Glyco_transf_17: Glyc 35.5 74 0.0016 32.6 5.6 56 30-87 137-199 (356)
85 KOG0916 1,3-beta-glucan syntha 33.7 1.4E+02 0.003 35.9 7.8 83 225-313 1172-1256(1679)
86 PF15050 SCIMP: SCIMP protein 32.1 68 0.0015 27.6 3.9 43 369-412 2-49 (133)
87 PF02434 Fringe: Fringe-like; 31.4 64 0.0014 31.1 4.2 27 64-91 85-111 (252)
88 PHA01631 hypothetical protein 28.1 51 0.0011 30.0 2.6 73 49-148 56-128 (176)
89 COG3162 Predicted membrane pro 27.4 3.7E+02 0.008 22.5 8.6 15 257-271 10-24 (102)
90 TIGR03310 matur_ygfJ molybdenu 25.8 2.9E+02 0.0063 24.3 7.3 54 32-92 63-116 (188)
91 PF05679 CHGN: Chondroitin N-a 21.6 1.5E+02 0.0032 31.8 5.1 50 31-88 314-363 (499)
92 PF01697 Glyco_transf_92: Glyc 21.4 1E+02 0.0022 29.6 3.6 59 49-110 89-150 (285)
93 PRK02726 molybdopterin-guanine 21.3 5.4E+02 0.012 23.4 8.3 40 48-91 79-118 (200)
94 COG4092 Predicted glycosyltran 20.9 2.7E+02 0.0059 27.6 6.2 59 27-88 58-116 (346)
95 TIGR01173 glmU UDP-N-acetylglu 20.2 3.5E+02 0.0076 27.7 7.6 52 32-92 65-117 (451)
No 1
>PLN02436 cellulose synthase A
Probab=100.00 E-value=1.1e-96 Score=795.52 Aligned_cols=412 Identities=36% Similarity=0.625 Sum_probs=378.8
Q ss_pred CcccCCCCccCCCceEEEEEcCCCCC---CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCC
Q 014850 1 MTVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY 77 (417)
Q Consensus 1 ~~~~~~~~~~~~p~~~~v~~~~~~~~---~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~ 77 (417)
+|.|++.+++|||+||||+++++++. ++++|+|+|++|||||+++||+||||||+.+|+|+.++|++||++|||||+
T Consensus 499 gt~W~g~~~~dHp~IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmY 578 (1094)
T PLN02436 499 GTPWPGNNVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHY 578 (1094)
T ss_pred CccCCCCCCCCCccceEEEecCCCCcccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccc
Confidence 47899999999999999999998653 568999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc-----Ccccc-hHHHHhHhhhhhhhcCCceecccCceeecccccccc
Q 014850 78 ANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLC 151 (417)
Q Consensus 78 ~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~~ 151 (417)
+|+|+.++++|||||||+.++++||||+||+|+ |+|+| +++||++.++|.||+|||+|+||||+|||+||+|..
T Consensus 579 iNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~ 658 (1094)
T PLN02436 579 INNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD 658 (1094)
T ss_pred cCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccC
Confidence 999999999999999999999999999999999 89999 999999999999999999999999999999999975
Q ss_pred cchhhc------------------------------------------------------------ccchhHHHHHHhhC
Q 014850 152 LDQIEH------------------------------------------------------------QGNIVEDELLKKFG 171 (417)
Q Consensus 152 ~~~~~~------------------------------------------------------------~~~~~~~~~~~~~G 171 (417)
++.-+. ...++.+.+.++||
T Consensus 659 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG 738 (1094)
T PLN02436 659 APKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFG 738 (1094)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhc
Confidence 431000 00134455678999
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCC
Q 014850 172 NSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIP 251 (417)
Q Consensus 172 ~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~ 251 (417)
+|.+|++|+....++.+ .+...+.++++|++|++|+||++|+||+|+||.|+++|||+.||++||++|||++||+|++
T Consensus 739 ~S~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r 816 (1094)
T PLN02436 739 QSPVFVASTLLENGGVP--RNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKR 816 (1094)
T ss_pred ccHHHHHHHHHhhcCCC--CCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCc
Confidence 99999999988764322 2445667899999999999999999999999999999999999999999999999999987
Q ss_pred ceeecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCC
Q 014850 252 HAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNS 331 (417)
Q Consensus 252 ~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y~~~~~~~l~~~~~l~~~l~P~l~l~~g~ 331 (417)
.++.|++|+|+.+++.||+|||.|++|+++++++|++.+..++|++.|||+|+.+++||+.+++.++|+++|+++|++|+
T Consensus 817 ~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l~LL~G~ 896 (1094)
T PLN02436 817 PAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGK 896 (1094)
T ss_pred hhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 78899999999999999999999999999988999986444789999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEeCcCCC
Q 014850 332 TFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIH 411 (417)
Q Consensus 332 ~~~p~~~~~~~~l~~~~f~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~ 411 (417)
+++|.++.+++++++.+|++++++.+++++|.|.++.+||++||+|+|..+++++++++++++|.|++++.+|.||+|..
T Consensus 897 ~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~ 976 (1094)
T PLN02436 897 FIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAA 976 (1094)
T ss_pred eecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceeccccc
Confidence 99999888888888999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred ccc
Q 014850 412 RSQ 414 (417)
Q Consensus 412 ~~~ 414 (417)
.++
T Consensus 977 d~~ 979 (1094)
T PLN02436 977 DDG 979 (1094)
T ss_pred ccc
Confidence 643
No 2
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=8.6e-98 Score=784.97 Aligned_cols=410 Identities=46% Similarity=0.771 Sum_probs=382.6
Q ss_pred CcccCCCCccCCCceEEEEEcCCCCC---CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCC
Q 014850 1 MTVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY 77 (417)
Q Consensus 1 ~~~~~~~~~~~~p~~~~v~~~~~~~~---~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~ 77 (417)
.++|++++++|||+||||+++++++. ++++|+|+|++|||||+++||+||||||+.+|+|+.++|++||+++||||+
T Consensus 133 ~~~w~~~~~~dH~~iiqv~~~~~~~~~~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y 212 (720)
T PF03552_consen 133 GTPWPGNTRRDHPGIIQVLLDNPGGKDVDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMY 212 (720)
T ss_pred CCcCCCCCCcCChhheEeeccCCCCcccccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEeccccc
Confidence 37899999999999999999998765 678999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc-----Ccccc-hHHHHhHhhhhhhhcCCceecccCceeecccccccc
Q 014850 78 ANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLC 151 (417)
Q Consensus 78 ~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~~ 151 (417)
+|+|+.++++||||+||..++++||||+||+|+ |+|+| +++||+++++|.||+|||+|+||||++||+||+|..
T Consensus 213 ~nn~~~~~~amc~~~d~~~g~~~~~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~ 292 (720)
T PF03552_consen 213 INNSQALREAMCFFMDPKIGKKIAFVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFD 292 (720)
T ss_pred ccchHHHHHHHHhhccCCCCCeeEEEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCC
Confidence 999999999999999999999999999999999 89999 999999999999999999999999999999999988
Q ss_pred cchhhccc--------------------------------------------------------chhHHHHHHhhCCcHH
Q 014850 152 LDQIEHQG--------------------------------------------------------NIVEDELLKKFGNSKE 175 (417)
Q Consensus 152 ~~~~~~~~--------------------------------------------------------~~~~~~~~~~~G~~~~ 175 (417)
++..+... .++.+++.++||+|.+
T Consensus 293 ~~~~~~~~~~~~~~~~~c~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~ 372 (720)
T PF03552_consen 293 PPRYEKDPEKTCCCCSCCFGRRKKKKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPE 372 (720)
T ss_pred CCchhcccCcceeeeecccCCcccccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHH
Confidence 75421100 0345677889999999
Q ss_pred HHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCCceee
Q 014850 176 FIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFL 255 (417)
Q Consensus 176 ~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~ 255 (417)
|++|+....++ .....+....+++|++|++|+||++|+||+|+||.|+++|||+.||++||++||||+||+|++.++.
T Consensus 373 fi~S~~~~~~~--~~~~~~~~~~L~EA~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~ 450 (720)
T PF03552_consen 373 FIASTLMAQGG--VPRSPSPASLLEEAIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFL 450 (720)
T ss_pred HHHHHHHHhcC--CCCCCChHHHHHHHHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhc
Confidence 99999854332 2335566778999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccc
Q 014850 256 GCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLP 335 (417)
Q Consensus 256 G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y~~~~~~~l~~~~~l~~~l~P~l~l~~g~~~~p 335 (417)
|.+|+++.+.+.|++|||.|.+|+++++++|++.+..++|++.||++|++.++|++.+++.++|+++|++||++|++++|
T Consensus 451 G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~P 530 (720)
T PF03552_consen 451 GSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRLKFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFP 530 (720)
T ss_pred ccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCCcHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccC
Confidence 99999999999999999999999999889999997668999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCc
Q 014850 336 KVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHR 412 (417)
Q Consensus 336 ~~~~~~~~l~~~~f~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~ 412 (417)
.++.+++++++.+|++++++++++++|.|.++++||++||+|++..+++|++|++++++|.+++++.+|.||+|...
T Consensus 531 k~s~~~~~~f~~lf~~~~~~~llE~~wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~d 607 (720)
T PF03552_consen 531 KVSSPWFIYFLALFVSIYAYSLLEFRWSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSD 607 (720)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHhccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeecccccc
Confidence 99999988888899999999999999999999999999999999999999999999999999999999999999876
No 3
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=3.8e-97 Score=801.74 Aligned_cols=412 Identities=37% Similarity=0.629 Sum_probs=378.7
Q ss_pred CcccCCCCccCCCceEEEEEcCCCCC---CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCC
Q 014850 1 MTVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY 77 (417)
Q Consensus 1 ~~~~~~~~~~~~p~~~~v~~~~~~~~---~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~ 77 (417)
++.|++.+++|||+||||+++++++. +.++|+|+|++|||||+++||+||||||+++|+|+.++|++||+++||||+
T Consensus 483 gt~W~g~~~~dHp~IiqVll~~~~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY 562 (1079)
T PLN02638 483 GTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHY 562 (1079)
T ss_pred CccCCCCCCCCCHHHHHHHhcCCCccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcc
Confidence 47899999999999999999998764 458999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc-----Ccccc-hHHHHhHhhhhhhhcCCceecccCceeecccccccc
Q 014850 78 ANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLC 151 (417)
Q Consensus 78 ~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~~ 151 (417)
+++|++|+++||||+||+.++++||||+||+|+ |||+| +++||+++++|+||+|||+||||||+|||+||+|..
T Consensus 563 iNns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~ 642 (1079)
T PLN02638 563 INNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYE 642 (1079)
T ss_pred cCchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcC
Confidence 999999999999999998899999999999999 89999 999999999999999999999999999999999985
Q ss_pred cchhhc--------------c----------------------------------------------cchhHHHHHHhhC
Q 014850 152 LDQIEH--------------Q----------------------------------------------GNIVEDELLKKFG 171 (417)
Q Consensus 152 ~~~~~~--------------~----------------------------------------------~~~~~~~~~~~~G 171 (417)
++...+ + .-++...+.++||
T Consensus 643 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG 722 (1079)
T PLN02638 643 PPIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFG 722 (1079)
T ss_pred Ccccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcc
Confidence 433210 0 0012234567999
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCC
Q 014850 172 NSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIP 251 (417)
Q Consensus 172 ~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~ 251 (417)
+|.+|++|+....+|.+. +.+.+.++++|++|++|+||++|+||+|+||.|+++|||+.||++||++|||++||+|++
T Consensus 723 ~S~~fi~S~~~~~~~~~~--~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r 800 (1079)
T PLN02638 723 QSAVFVASTLMENGGVPQ--SATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKR 800 (1079)
T ss_pred ccHHHHHHHHHhhcCCCC--CCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCc
Confidence 999999999987766543 345677999999999999999999999999999999999999999999999999999887
Q ss_pred ceeecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCC
Q 014850 252 HAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNS 331 (417)
Q Consensus 252 ~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y~~~~~~~l~~~~~l~~~l~P~l~l~~g~ 331 (417)
.++.|++|+|+.+++.||+|||+|.+|+++++++|++.+..++|++.||++|+++++||+.+++.++|+++|+++|++|+
T Consensus 801 ~AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~liY~llP~l~Ll~G~ 880 (1079)
T PLN02638 801 PAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGK 880 (1079)
T ss_pred hHhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88899999999999999999999999999988999986544789999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEeCcCCC
Q 014850 332 TFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIH 411 (417)
Q Consensus 332 ~~~p~~~~~~~~l~~~~f~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~ 411 (417)
+++|.++.+++++++++|++++++++++++|.|.++.+||++||+|+|..+++|+++++++++|.|++++.+|.||+|..
T Consensus 881 ~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~ 960 (1079)
T PLN02638 881 FIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKAS 960 (1079)
T ss_pred ccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceeccccc
Confidence 99998888888888899999999999999999999999999999999999999999999999999999999999999976
Q ss_pred ccc
Q 014850 412 RSQ 414 (417)
Q Consensus 412 ~~~ 414 (417)
..+
T Consensus 961 d~~ 963 (1079)
T PLN02638 961 DED 963 (1079)
T ss_pred ccc
Confidence 543
No 4
>PLN02195 cellulose synthase A
Probab=100.00 E-value=4.2e-96 Score=788.01 Aligned_cols=411 Identities=37% Similarity=0.627 Sum_probs=376.2
Q ss_pred CcccCCCCccCCCceEEEEEcCCCCC---CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCC
Q 014850 1 MTVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY 77 (417)
Q Consensus 1 ~~~~~~~~~~~~p~~~~v~~~~~~~~---~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~ 77 (417)
+|.|++.+++|||+||||+++++++. ++++|+|+|++|||+||++||+||||||+++|+|+.++|+|||+++||||+
T Consensus 386 ~t~W~g~~~~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy 465 (977)
T PLN02195 386 GTPWPGNNTRDHPGMIQVFLGETGARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHY 465 (977)
T ss_pred CccCCCCCCCCCcchhhhhccCCCCcccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccc
Confidence 57899999999999999999987753 568999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc-----Ccccc-hHHHHhHhhhhhhhcCCceecccCceeecccccccc
Q 014850 78 ANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLC 151 (417)
Q Consensus 78 ~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~~ 151 (417)
+++|++|+++||||+||+.++++|+||+||+|| |+|+| +++||+++++|+||+|||+||||||++||+||+|..
T Consensus 466 ~n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~ 545 (977)
T PLN02195 466 VNNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYG 545 (977)
T ss_pred cCcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccC
Confidence 998899999999999999899999999999999 89999 999999999999999999999999999999999976
Q ss_pred cchh---------------------hc--------------------------------ccchhHHHHHHhhCCcHHHHH
Q 014850 152 LDQI---------------------EH--------------------------------QGNIVEDELLKKFGNSKEFIK 178 (417)
Q Consensus 152 ~~~~---------------------~~--------------------------------~~~~~~~~~~~~~G~~~~~~~ 178 (417)
++.+ +. ....+...+..+||+|.+|+.
T Consensus 546 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~ 625 (977)
T PLN02195 546 PPSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIE 625 (977)
T ss_pred ccccccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHH
Confidence 4332 00 000122356679999999999
Q ss_pred HHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCCceeeccc
Q 014850 179 SAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCA 258 (417)
Q Consensus 179 s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~ 258 (417)
|+....+|.+. ......++++|++|++|+||++|+||+|+||.|+++|||+.||++||++|||++||+|++.++.|++
T Consensus 626 S~~~~~~~~~~--~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~A 703 (977)
T PLN02195 626 STLMENGGVPE--SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSA 703 (977)
T ss_pred HHHHHhcCCCC--CCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccC
Confidence 99877665443 3345568999999999999999999999999999999999999999999999999998877889999
Q ss_pred CCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhc-cCchHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcccccc
Q 014850 259 SPSGPAGMRQQKRWATGLLEILFSKRNPILATLI-GKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKV 337 (417)
Q Consensus 259 P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~-~~l~~~qrl~y~~~~~~~l~~~~~l~~~l~P~l~l~~g~~~~p~~ 337 (417)
|+|+.++++||+|||+|.+|+++++++|++.+.. ++|++.||++|+++++||+.+++.++|+++|+++|++|++++|.+
T Consensus 704 P~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~v 783 (977)
T PLN02195 704 PINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTL 783 (977)
T ss_pred CCCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccc
Confidence 9999999999999999999999988999986432 689999999999999999999999999999999999999999998
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCcc
Q 014850 338 QEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRS 413 (417)
Q Consensus 338 ~~~~~~l~~~~f~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~ 413 (417)
+.+++++++.+|++++++++++++|.|.++++||++||+|+|..+++|+++++++++|.|++++.+|.||+|...+
T Consensus 784 s~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd 859 (977)
T PLN02195 784 SNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADD 859 (977)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccc
Confidence 8888888888999999999999999999999999999999999999999999999999999999999999997654
No 5
>PLN02400 cellulose synthase
Probab=100.00 E-value=1.6e-96 Score=797.07 Aligned_cols=411 Identities=37% Similarity=0.636 Sum_probs=377.8
Q ss_pred CcccCCCCccCCCceEEEEEcCCCCC---CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCC
Q 014850 1 MTVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY 77 (417)
Q Consensus 1 ~~~~~~~~~~~~p~~~~v~~~~~~~~---~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~ 77 (417)
+|.|++.+++|||+||||+++++++. ++++|+|+|++|||||+++||+||||||+.+|+|+.++|++||++|||||+
T Consensus 490 gt~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY 569 (1085)
T PLN02400 490 GTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHY 569 (1085)
T ss_pred CccCCCCCCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccc
Confidence 57899999999999999999998863 568999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc-----Ccccc-hHHHHhHhhhhhhhcCCceecccCceeecccccccc
Q 014850 78 ANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLC 151 (417)
Q Consensus 78 ~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~~ 151 (417)
+++|+.++++|||||||+.++++||||+||+|+ |+|+| +++||++.++|.||+|||+|+||||+|||+||+|..
T Consensus 570 ~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~ 649 (1085)
T PLN02400 570 FNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYD 649 (1085)
T ss_pred cCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCC
Confidence 999999999999999999999999999999999 89999 999999999999999999999999999999999975
Q ss_pred cchhhc--------------------------------------------------------cc--chhHHHHHHhhCCc
Q 014850 152 LDQIEH--------------------------------------------------------QG--NIVEDELLKKFGNS 173 (417)
Q Consensus 152 ~~~~~~--------------------------------------------------------~~--~~~~~~~~~~~G~~ 173 (417)
++..+. +. -++.+.+..+||+|
T Consensus 650 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S 729 (1085)
T PLN02400 650 PVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQS 729 (1085)
T ss_pred Cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhcccc
Confidence 421100 00 02345567799999
Q ss_pred HHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCCce
Q 014850 174 KEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHA 253 (417)
Q Consensus 174 ~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~ 253 (417)
.+|++|+... .|. ...+.+.+.++++|++|++|+||++|+||+|+||.|+++|||+.||++||++|||++||+|++++
T Consensus 730 ~~fi~S~~~~-~~~-~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~a 807 (1085)
T PLN02400 730 PVFIAATFME-QGG-IPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPA 807 (1085)
T ss_pred HHHHHHHHHH-hcC-CCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHh
Confidence 9999999844 322 22345667799999999999999999999999999999999999999999999999999988888
Q ss_pred eecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcc
Q 014850 254 FLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTF 333 (417)
Q Consensus 254 ~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y~~~~~~~l~~~~~l~~~l~P~l~l~~g~~~ 333 (417)
+.|++|+|+.++++||+|||+|.+|+++++++|++.+..++|++.|||+|+.+++||+.+++.++|+++|+++|++|+++
T Consensus 808 f~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~liY~llP~l~LltG~~i 887 (1085)
T PLN02400 808 FKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAFCLITNKFI 887 (1085)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999998899998654478999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCcc
Q 014850 334 LPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRS 413 (417)
Q Consensus 334 ~p~~~~~~~~l~~~~f~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~ 413 (417)
+|.++.+++++++.+|++++++++++++|.|.++.+||++||+|+|..+++++++++++++|.|++++.+|.||+|..++
T Consensus 888 ~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~ 967 (1085)
T PLN02400 888 IPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDE 967 (1085)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCcccc
Confidence 99988888888888899999999999999999999999999999999999999999999999999999999999997654
No 6
>PLN02189 cellulose synthase
Probab=100.00 E-value=5.4e-96 Score=790.72 Aligned_cols=412 Identities=38% Similarity=0.635 Sum_probs=376.6
Q ss_pred CcccCCCCccCCCceEEEEEcCCCCC---CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCC
Q 014850 1 MTVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY 77 (417)
Q Consensus 1 ~~~~~~~~~~~~p~~~~v~~~~~~~~---~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~ 77 (417)
++.|++.+++|||+|+||+++++++. ++++|+|+|++|||+|+++||+||||||+++|+|+.++|+|||+++||||+
T Consensus 465 Gt~W~g~~~~dHp~IiQVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY 544 (1040)
T PLN02189 465 GTPWPGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHY 544 (1040)
T ss_pred CccCCCCCCCCCHHHHHHHhcCCCCccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccc
Confidence 36899999999999999999998763 568999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc-----Ccccc-hHHHHhHhhhhhhhcCCceecccCceeecccccccc
Q 014850 78 ANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLC 151 (417)
Q Consensus 78 ~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~~ 151 (417)
+++|++|+++||||+||+.++++||||+||+|+ |||+| +++||+++++|+||+|||+||||||++||+||+|..
T Consensus 545 ~Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~ 624 (1040)
T PLN02189 545 INNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYD 624 (1040)
T ss_pred cCchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccC
Confidence 999999999999999998899999999999999 89999 999999999999999999999999999999999975
Q ss_pred cchhh---------------------------------------cccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCC
Q 014850 152 LDQIE---------------------------------------HQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYS 192 (417)
Q Consensus 152 ~~~~~---------------------------------------~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~ 192 (417)
++... .+.-.+.+.+..+||+|.+|+.|+....++. ...
T Consensus 625 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~--~~~ 702 (1040)
T PLN02189 625 PPKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGV--PPS 702 (1040)
T ss_pred cccccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCC--CCC
Confidence 53110 0000133456679999999999998764332 224
Q ss_pred CcccchHHHHhhhhccccccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHH
Q 014850 193 SNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRW 272 (417)
Q Consensus 193 ~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RW 272 (417)
.....++++|++|++|+||++|+||+|+||.|+++|||+.||++||++|||++||+|++.++.|++|+|+.+++.||+||
T Consensus 703 ~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RW 782 (1040)
T PLN02189 703 SSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRW 782 (1040)
T ss_pred CCcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHH
Confidence 45567899999999999999999999999999999999999999999999999999888888999999999999999999
Q ss_pred hhhhhHHHHhhcchhhhhh-ccCchHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHH
Q 014850 273 ATGLLEILFSKRNPILATL-IGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLI 351 (417)
Q Consensus 273 a~G~~qi~~~~~~p~~~~~-~~~l~~~qrl~y~~~~~~~l~~~~~l~~~l~P~l~l~~g~~~~p~~~~~~~~l~~~~f~~ 351 (417)
|+|.+|+++++++|++.+. .++|++.|||+|+.+++|++.+++.++|+++|+++|++|.+++|.++.+++.+++.+|++
T Consensus 783 A~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~ 862 (1040)
T PLN02189 783 ALGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMS 862 (1040)
T ss_pred hhhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHH
Confidence 9999999998899999643 267999999999999999999999999999999999999999999888888888888999
Q ss_pred HHHHHHHHHHHhCCchhhhHhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCccc
Q 014850 352 YKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQ 414 (417)
Q Consensus 352 ~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~ 414 (417)
++++.+++++|.|.++++||++||+|++..+++++++++++++|.|++++.+|.||+|..+++
T Consensus 863 ~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~ 925 (1040)
T PLN02189 863 IFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDD 925 (1040)
T ss_pred HHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceecccccccc
Confidence 999999999999999999999999999999999999999999999999999999999977654
No 7
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=2e-95 Score=768.79 Aligned_cols=407 Identities=52% Similarity=0.923 Sum_probs=369.9
Q ss_pred cccCCCCccCCCceEEEEEcCCCCC--CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCC
Q 014850 2 TVFSNTERMNHPTIVKVISENKGGL--SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYAN 79 (417)
Q Consensus 2 ~~~~~~~~~~~p~~~~v~~~~~~~~--~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p 79 (417)
..|++++|+|||+||||++|++++. ++++|+|+|++|||||+++||+||||||+.+|+|+.++|++||+++||||++|
T Consensus 221 ~~~~~~~~~dH~~iiqVll~~~~~~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~N 300 (756)
T PLN02190 221 EAFSNTKPNDHSTIVKVVWENKGGVGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYAN 300 (756)
T ss_pred cccCCCCCCCCccceEEEecCCCCccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccC
Confidence 4688999999999999999997654 55899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhCCCCC-CcEEEEeCCccccCcccc-hHHHHhHhhhhhhhcCCceecccCceeecccccccccchhhc
Q 014850 80 NPEIVLQAMCLHLGSKNE-NEFAFIQSPQYFYDRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEH 157 (417)
Q Consensus 80 ~p~~L~~~v~~f~d~~~~-~~vg~VQ~pq~f~d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~~~~~~~~ 157 (417)
+|+.++++||||+|++.+ .++||||+||+|+|+|+| +++||++.+.|.||+|||+|+||||+|||+||+|..++.++.
T Consensus 301 ns~~~r~AmCf~ld~~~~~~~~~fVQfPQ~F~D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~ 380 (756)
T PLN02190 301 EADVVRQAMCIFLQKSKNSNHCAFVQFPQEFYDSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLED 380 (756)
T ss_pred chhHHHHhhhhhcCCCCCCCeeEEEeCchhhccccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCcccccc
Confidence 999999999999998655 489999999999999999 999999999999999999999999999999999987655443
Q ss_pred ccc---------hhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccc
Q 014850 158 QGN---------IVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATA 228 (417)
Q Consensus 158 ~~~---------~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~lt 228 (417)
.+. .....+.++||+|..|++|+...++++.... .+.+.++++|++|++|+||++|+||+|+||.|+++|
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~~-~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSit 459 (756)
T PLN02190 381 DGSLSSVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNPQ-NSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVA 459 (756)
T ss_pred cccccccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCCc-cchHHHHHHHHhhcccCCCCCCchhhccCcccceee
Confidence 221 2334456799999999999987665443222 224568999999999999999999999999999999
Q ss_pred hhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHHHHHHH
Q 014850 229 EDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILT 308 (417)
Q Consensus 229 ED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y~~~~~ 308 (417)
||+.||++||++|||++||+|++.++.|.+|+++.++++||+|||.|.+|+++++++|++.+..++|++.||++|++..+
T Consensus 460 ED~~TGl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~ 539 (756)
T PLN02190 460 EDLNTSIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT 539 (756)
T ss_pred chHHHHHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999988899999999999999999999999999999989999874458999999999999877
Q ss_pred HHhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhhhhHHHHHHHHHHHHH
Q 014850 309 WGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFG 388 (417)
Q Consensus 309 ~~l~~~~~l~~~l~P~l~l~~g~~~~p~~~~~~~~l~~~~f~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~a 388 (417)
++.+++.++|+++|+++|++|.+++|.. +++.+++.++++++++++++++|+|.++++|||+||||++..+++|++|
T Consensus 540 -~~~sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a 616 (756)
T PLN02190 540 -CLRSIPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFS 616 (756)
T ss_pred -HHHHHHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHH
Confidence 9999999999999999999999999964 5666777788888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCeEeCcCCCc
Q 014850 389 LVNAALEQFGFSEAVFEITQKIHR 412 (417)
Q Consensus 389 ~~~~ll~~l~~~~~~F~VTpK~~~ 412 (417)
++++++|.|++++..|.||+|...
T Consensus 617 ~~~~~lK~lg~s~~~F~vTsK~~~ 640 (756)
T PLN02190 617 IQDIILKLLGISKTVFIVTKKTMP 640 (756)
T ss_pred HHHHHHHHhccccceEEEeecccc
Confidence 999999999999999999999643
No 8
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=5e-95 Score=783.40 Aligned_cols=411 Identities=37% Similarity=0.634 Sum_probs=373.9
Q ss_pred CcccCCCCccCCCceEEEEEcCCCCC---CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCC
Q 014850 1 MTVFSNTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY 77 (417)
Q Consensus 1 ~~~~~~~~~~~~p~~~~v~~~~~~~~---~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~ 77 (417)
+|.|++...+|||+||||+++++++. ++++|+|+||+|||||+++||+||||||+.+|+|+.++|++||++|||||+
T Consensus 421 gt~W~g~~~~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY 500 (1044)
T PLN02915 421 GTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHY 500 (1044)
T ss_pred CccCCCCCCCCCccceEEeecCCCCcccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccc
Confidence 57899888899999999999998763 668999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc-----Ccccc-hHHHHhHhhhhhhhcCCceecccCceeecccccccc
Q 014850 78 ANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLC 151 (417)
Q Consensus 78 ~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~~ 151 (417)
+++|+.++++|||||||+.++++||||+||+|+ |+|+| +++||++.+.|.||+|||+|+||||+|||+||+|..
T Consensus 501 ~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~ 580 (1044)
T PLN02915 501 INNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYD 580 (1044)
T ss_pred cCcchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcC
Confidence 999999999999999999999999999999999 89999 999999999999999999999999999999999975
Q ss_pred cchhhc--------------------------------------------------------------------------
Q 014850 152 LDQIEH-------------------------------------------------------------------------- 157 (417)
Q Consensus 152 ~~~~~~-------------------------------------------------------------------------- 157 (417)
++..+.
T Consensus 581 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (1044)
T PLN02915 581 PPVSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEI 660 (1044)
T ss_pred Cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 542110
Q ss_pred ------------ccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCc
Q 014850 158 ------------QGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYG 225 (417)
Q Consensus 158 ------------~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~ 225 (417)
.+.++...+..+||+|.+|++|+....+|. ..+...+.++++|++|++|+||++|+||+|+||.|+
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~--~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YG 738 (1044)
T PLN02915 661 EEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGL--PEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYG 738 (1044)
T ss_pred ccccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcCC--CCCCCcHHHHHHHHhccccCCCccCchhHhhCcccc
Confidence 000233456679999999999998754443 234566679999999999999999999999999999
Q ss_pred ccchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHHHH
Q 014850 226 ATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLW 305 (417)
Q Consensus 226 ~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y~~ 305 (417)
++|||+.||++||++|||++||+|++.++.|++|+|+.++++||+|||.|.+|+++++++|++.+..++|++.||++|++
T Consensus 739 SvTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~ 818 (1044)
T PLN02915 739 SVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYIN 818 (1044)
T ss_pred ccccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHH
Confidence 99999999999999999999999887888999999999999999999999999999889999964347999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhhhhHHHHHHHHHH
Q 014850 306 ILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAW 385 (417)
Q Consensus 306 ~~~~~l~~~~~l~~~l~P~l~l~~g~~~~p~~~~~~~~l~~~~f~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~ 385 (417)
+++||+.+++.++|+++|+++|++|++++|.++.....+++.+|++++++.+++++|.|.++.+||++||+|+|..+++|
T Consensus 819 ~~~yp~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~ 898 (1044)
T PLN02915 819 TIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAH 898 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999976665555567778888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCeEeCcCCCcc
Q 014850 386 LFGLVNAALEQFGFSEAVFEITQKIHRS 413 (417)
Q Consensus 386 ~~a~~~~ll~~l~~~~~~F~VTpK~~~~ 413 (417)
+++++++++|.|++++.+|+||+|....
T Consensus 899 Lfavl~~iLKvLg~se~~F~VTsK~~d~ 926 (1044)
T PLN02915 899 LFAVFQGLLKVLGGVDTNFTVTSKAADD 926 (1044)
T ss_pred HHHHHHHHHHHhcccCCcceecCCcccc
Confidence 9999999999999999999999998654
No 9
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=2.8e-93 Score=771.01 Aligned_cols=405 Identities=34% Similarity=0.567 Sum_probs=360.7
Q ss_pred CCCccCCCceEEEEEcCCCCC-----------------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCE
Q 014850 6 NTERMNHPTIVKVISENKGGL-----------------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPF 68 (417)
Q Consensus 6 ~~~~~~~p~~~~v~~~~~~~~-----------------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~ 68 (417)
+++|+|||+||||++++++.+ +.++|+|+|++|||+|+++||+||||||+.+|+|+.++|++|
T Consensus 543 ~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPf 622 (1135)
T PLN02248 543 DHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPF 622 (1135)
T ss_pred CCCCCCCcceeEEeccCCCcccccCcccccccccccccccccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCe
Confidence 579999999999999875511 227999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc-----Ccccc-hHHHHhHhhhhhhhcCCceecccCcee
Q 014850 69 MLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFH 142 (417)
Q Consensus 69 v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~ 142 (417)
|+++||||++++|++|+++||||+|++ ++++||||+||+|+ |||+| +++||+++++|+||+|||+||||||+|
T Consensus 623 ILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQrF~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCff 701 (1135)
T PLN02248 623 ILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLF 701 (1135)
T ss_pred EEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcccCCCCCCCccCCcceeeeeeeeccccccCCccccccCcee
Confidence 999999999999999999999999996 89999999999999 89999 999999999999999999999999999
Q ss_pred ecccccccccchhhcc-------------------------------cchhHHHHHHhhCCcHHHHHHHHHhh-cCCCCC
Q 014850 143 RRDVVYGLCLDQIEHQ-------------------------------GNIVEDELLKKFGNSKEFIKSAAQTL-EGKTGG 190 (417)
Q Consensus 143 Rr~al~~~~~~~~~~~-------------------------------~~~~~~~~~~~~G~~~~~~~s~~~~l-~g~~~~ 190 (417)
||+||+|..++...+. .+++...+.++||++..|..|+.... ++++..
T Consensus 702 RR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~ 781 (1135)
T PLN02248 702 RRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLA 781 (1135)
T ss_pred eehhhcCcCCcccccccccccccccccccccccccccccccccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccc
Confidence 9999999866543100 01223345669999999999987655 234331
Q ss_pred C-----------------CCcccchHHHHhhhhccccccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCCce
Q 014850 191 Y-----------------SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHA 253 (417)
Q Consensus 191 ~-----------------~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~ 253 (417)
. ......++++|+.|++|.||++|+||+++||.|+++|||+.||++||++|||++||+|++.+
T Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~A 861 (1135)
T PLN02248 782 DHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDA 861 (1135)
T ss_pred cccccccccccccccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHh
Confidence 1 11133578999999999999999999999999999999999999999999999999888888
Q ss_pred eecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCcc
Q 014850 254 FLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTF 333 (417)
Q Consensus 254 ~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y~~~~~~~l~~~~~l~~~l~P~l~l~~g~~~ 333 (417)
+.|++|+|+.++++||+|||+|.+|+++++++|++.+ ++|++.|||+|+++++||+.+++.++|+++|+++|++|+++
T Consensus 862 F~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~--~~Lsl~QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~ 939 (1135)
T PLN02248 862 FRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--RRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFI 939 (1135)
T ss_pred hcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 8999999999999999999999999999888898875 79999999999999999999999999999999999999988
Q ss_pred ccccchhhHHHHHHH-HHHHHHHHHHHHHHhCCchhhhHhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCc
Q 014850 334 LPKVQEPTVLIPLAL-FLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHR 412 (417)
Q Consensus 334 ~p~~~~~~~~l~~~~-f~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~ 412 (417)
+|.. ..++++++++ +++++++.+++++|+|.++++||++||+|++..+++|+++++++++|.|++++.+|.||+|...
T Consensus 940 ~p~~-~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~ 1018 (1135)
T PLN02248 940 VQTL-NVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAG 1018 (1135)
T ss_pred cccc-cHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCcccc
Confidence 8874 4555555544 5677888999999999999999999999999999999999999999999999999999999876
Q ss_pred cc
Q 014850 413 SQ 414 (417)
Q Consensus 413 ~~ 414 (417)
++
T Consensus 1019 ~d 1020 (1135)
T PLN02248 1019 DD 1020 (1135)
T ss_pred cc
Confidence 65
No 10
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=1.2e-92 Score=751.18 Aligned_cols=391 Identities=36% Similarity=0.625 Sum_probs=353.1
Q ss_pred CcccC-CCCccCCCceEEEEEcCCCCC---CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCC
Q 014850 1 MTVFS-NTERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM 76 (417)
Q Consensus 1 ~~~~~-~~~~~~~p~~~~v~~~~~~~~---~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~ 76 (417)
|+.|. |++|+|||+||||++|++++. ++++|+++|++|||||+++||+||||||+++++++.++|+|||++|||||
T Consensus 230 f~~w~~~~~~~dH~~ivqV~l~~~~~~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~ 309 (734)
T PLN02893 230 FSRWTDKFTRQDHPTVIQVLLESGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDM 309 (734)
T ss_pred cccCcCCCCCCCCCceeeeeccCCCccchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCc
Confidence 46784 889999999999999998754 56899999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc-----Ccccc-hHHHHhHhhhhhhhcCCceecccCceeeccccccc
Q 014850 77 YANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGL 150 (417)
Q Consensus 77 ~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~-----d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~ 150 (417)
++|+|++|+++||||+||+.++++|+||+||+|+ |+++| +++||+++++|+||+++++||||||++||+||+|.
T Consensus 310 y~n~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~ 389 (734)
T PLN02893 310 YSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGG 389 (734)
T ss_pred CCCchhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCC
Confidence 9889999999999999998899999999999999 89999 99999999999999999999999999999999986
Q ss_pred ccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccchh
Q 014850 151 CLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAED 230 (417)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED 230 (417)
......+ ..+.++..... ......++++++|++|++|.||++|+||+++||.++++|||
T Consensus 390 ~~~~~~~--------~~~~~~~~~~~-------------~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED 448 (734)
T PLN02893 390 PSSLILP--------EIPELNPDHLV-------------DKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVED 448 (734)
T ss_pred Cccccch--------hhhhccccccc-------------ccccchHHHHHHhhhccccccccCCccccccceEecccccc
Confidence 4311000 00011111111 11223445789999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHHHHHHHHH
Q 014850 231 NLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWG 310 (417)
Q Consensus 231 ~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y~~~~~~~ 310 (417)
++||++||++|||++||+|++.++.|++|+|+.++++||+|||.|.+|+++++++|++.+ .++|++.||++|++..+|+
T Consensus 449 ~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g-~~~L~~~Qrl~Y~~~~~~~ 527 (734)
T PLN02893 449 YYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFG-VKSIGLLMGLGYAHYAFWP 527 (734)
T ss_pred HHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhc-ccCCCHHHHHHHHHHHHHH
Confidence 999999999999999999877788999999999999999999999999999889999864 3689999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhhhhHHHHHHHHHHHHHHH
Q 014850 311 LRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLV 390 (417)
Q Consensus 311 l~~~~~l~~~l~P~l~l~~g~~~~p~~~~~~~~l~~~~f~~~~~~~ll~~~~~g~~~~~~w~~~~~w~i~~~~~~~~a~~ 390 (417)
+.+++.++|+++|+++|++|++++|.++.+++++++++|++++++++++++++|.++.+||++|++|++..+++|+++++
T Consensus 528 ~~slp~liY~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l 607 (734)
T PLN02893 528 IWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLV 607 (734)
T ss_pred HhHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHH
Confidence 99999999999999999999999999888998888888889899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCeEeCcCCCcc
Q 014850 391 NAALEQFGFSEAVFEITQKIHRS 413 (417)
Q Consensus 391 ~~ll~~l~~~~~~F~VTpK~~~~ 413 (417)
++++|.|+.++.+|+||+|+.+.
T Consensus 608 ~~iLk~lg~s~~~F~VT~K~~~~ 630 (734)
T PLN02893 608 EFLLKTLGISTFGFNVTSKVVDE 630 (734)
T ss_pred HHHHHHhcccCCceeecCCCccc
Confidence 99999999999999999998654
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=1.8e-48 Score=425.04 Aligned_cols=313 Identities=22% Similarity=0.322 Sum_probs=248.3
Q ss_pred CccCCCc---eEEEEEcCCCCCCC---CCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCch
Q 014850 8 ERMNHPT---IVKVISENKGGLSD---EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNP 81 (417)
Q Consensus 8 ~~~~~p~---~~~v~~~~~~~~~~---~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p 81 (417)
..+|||. .|-|++|.++|+.. +..+++|++|++|. |+||||||+|++ .+++|||+++|||++ |+|
T Consensus 284 l~~dYP~~k~EViVVDDgS~D~t~~la~~~~v~yI~R~~n~----~gKAGnLN~aL~----~a~GEyIavlDAD~i-p~p 354 (852)
T PRK11498 284 LGIDWPKDKLNIWILDDGGREEFRQFAQEVGVKYIARPTHE----HAKAGNINNALK----YAKGEFVAIFDCDHV-PTR 354 (852)
T ss_pred HhccCCCCceEEEEEeCCCChHHHHHHHHCCcEEEEeCCCC----cchHHHHHHHHH----hCCCCEEEEECCCCC-CCh
Confidence 3578986 56677777766511 22479999999874 799999999999 589999999999996 799
Q ss_pred HHHHHHHHHhhCCCCCCcEEEEeCCcccc--Ccc----------cc-hHHHHhHhhhhhhhcCCceecccCceeeccccc
Q 014850 82 EIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRP----------EN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVY 148 (417)
Q Consensus 82 ~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~--d~~----------~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~ 148 (417)
|+|++++++|. .||++|+||+||.|+ |++ .+ ...||+.++.|.+.++++++||+++++||++++
T Consensus 355 dfL~~~V~~f~---~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLe 431 (852)
T PRK11498 355 SFLQMTMGWFL---KDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLD 431 (852)
T ss_pred HHHHHHHHHHH---hCCCeEEEEcceeccCCchHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHH
Confidence 99999999986 789999999999998 433 12 356889999999999999999999999999985
Q ss_pred ccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccc
Q 014850 149 GLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATA 228 (417)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~lt 228 (417)
++ |||+++++|
T Consensus 432 eV---------------------------------------------------------------------GGfd~~tit 442 (852)
T PRK11498 432 EI---------------------------------------------------------------------GGIAVETVT 442 (852)
T ss_pred Hh---------------------------------------------------------------------cCCCCCccC
Confidence 32 589999999
Q ss_pred hhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHHHHHHH
Q 014850 229 EDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILT 308 (417)
Q Consensus 229 ED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y~~~~~ 308 (417)
||++++++|+++||+++|++ + +...|++|+|++++++||.||++|.+|++++ ++|++. +++++.||++|+++++
T Consensus 443 ED~dlslRL~~~Gyrv~yl~-~-~~a~glaPesl~~~~~QR~RWarG~lQi~r~-~~pl~~---~gL~~~qRl~y~~~~l 516 (852)
T PRK11498 443 EDAHTSLRLHRRGYTSAYMR-I-PQAAGLATESLSAHIGQRIRWARGMVQIFRL-DNPLTG---KGLKLAQRLCYANAML 516 (852)
T ss_pred ccHHHHHHHHHcCCEEEEEe-c-cceeEECCCCHHHHHHHHHHHHHHHHHHHHH-hChhcc---CCCCHHHHHHHHHHHH
Confidence 99999999999999999974 3 3557999999999999999999999999975 788876 8999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHH-HHHHHhCCchhhhHhhhhHHHHHHHHHHHH
Q 014850 309 WGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTL-LEYIQAGLSIRSWWVNNCMARIVTTSAWLF 387 (417)
Q Consensus 309 ~~l~~~~~l~~~l~P~l~l~~g~~~~p~~~~~~~~l~~~~f~~~~~~~l-l~~~~~g~~~~~~w~~~~~w~i~~~~~~~~ 387 (417)
+++.+++.++|+++|++++++|..++.. ....++.++ +++++... ......|.....+|++ .+..+.+++.
T Consensus 517 ~~l~g~~~l~~l~~Pl~~l~~gi~~i~a-~~~~i~~y~---lP~~~~~~l~~~~~~g~~r~~~wse----iye~v~a~~l 588 (852)
T PRK11498 517 HFLSGIPRLIFLTAPLAFLLLHAYIIYA-PALMIALFV---LPHMIHASLTNSRIQGKYRHSFWSE----IYETVLAWYI 588 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChheeC-ChHHHHHHH---HHHHHHHHHHHHHhcCcchHhHHHH----HHHHHHHHHH
Confidence 9999999999999999999999754432 222222222 33333322 2333455555667754 3555566555
Q ss_pred HHHHHHHHHHcCCCCCeEeCcCCCccccC
Q 014850 388 GLVNAALEQFGFSEAVFEITQKIHRSQRC 416 (417)
Q Consensus 388 a~~~~ll~~l~~~~~~F~VTpK~~~~~~~ 416 (417)
+.. .+...+++++.+|+|||||+..++.
T Consensus 589 ~~~-~~~~ll~p~~~~F~VTpKg~~~~~~ 616 (852)
T PRK11498 589 APP-TTVALFNPHKGKFNVTAKGGLVEEE 616 (852)
T ss_pred HHH-HHHHHcCccCCCcccCCCCcccccc
Confidence 443 4445788999999999999876653
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=1.8e-47 Score=416.88 Aligned_cols=312 Identities=22% Similarity=0.333 Sum_probs=250.7
Q ss_pred CccCCCc---eEEEEEcCCCCCC-------------C--------CCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCC
Q 014850 8 ERMNHPT---IVKVISENKGGLS-------------D--------EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLM 63 (417)
Q Consensus 8 ~~~~~p~---~~~v~~~~~~~~~-------------~--------~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~ 63 (417)
..+|||. .|-|++|.++|.. . +..+++|++|++| +|+||||||+|++ .
T Consensus 155 ~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v~yi~r~~n----~~~KAgnLN~al~----~ 226 (713)
T TIGR03030 155 KNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVNYITRPRN----VHAKAGNINNALK----H 226 (713)
T ss_pred HhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcCcEEEECCCC----CCCChHHHHHHHH----h
Confidence 4578994 5667777765531 0 1237899999988 4799999999999 5
Q ss_pred CCCCEEEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccC--ccc----------c-hHHHHhHhhhhhhhc
Q 014850 64 TNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYD--RPE----------N-LCILNEYIGKGIVGI 130 (417)
Q Consensus 64 ~~~e~v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d--~~~----------~-~~~f~~~~~~g~~~~ 130 (417)
+++|||+++|||++ |+||+|++++++|. .||++|+||+||.|++ +.. + ...||..++.|.+.+
T Consensus 227 a~gd~Il~lDAD~v-~~pd~L~~~v~~f~---~dp~v~~Vqtp~~f~~p~~~~~nl~~~~~~~~e~~~f~~~i~~g~~~~ 302 (713)
T TIGR03030 227 TDGELILIFDADHV-PTRDFLQRTVGWFV---EDPKLFLVQTPHFFVSPDPIERNLGTFRRMPNENELFYGLIQDGNDFW 302 (713)
T ss_pred cCCCEEEEECCCCC-cChhHHHHHHHHHH---hCCCEEEEeCCeeccCCCHHhhhhHHHHHhhhHHHHHHHHHHHHHhhh
Confidence 89999999999996 69999999999995 6789999999999883 221 2 346888899999999
Q ss_pred CCceecccCceeecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhcccc
Q 014850 131 QGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGY 210 (417)
Q Consensus 131 ~~~~~~Gtg~~~Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y 210 (417)
+++++||+++++||++++++
T Consensus 303 ~~~~~~Gs~~~iRR~al~~i------------------------------------------------------------ 322 (713)
T TIGR03030 303 NAAFFCGSAAVLRREALDEI------------------------------------------------------------ 322 (713)
T ss_pred CCeeecCceeEEEHHHHHHc------------------------------------------------------------
Confidence 99999999999999998532
Q ss_pred ccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhh
Q 014850 211 EYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILAT 290 (417)
Q Consensus 211 ~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~ 290 (417)
|||++++++||++++++|+++||+++|++ + +.+.|++|+|++++++||.||++|++|+++. .+|++.
T Consensus 323 ---------GGf~~~~vtED~~l~~rL~~~G~~~~y~~-~-~~~~g~~p~sl~~~~~Qr~RWa~G~~qi~~~-~~pl~~- 389 (713)
T TIGR03030 323 ---------GGIAGETVTEDAETALKLHRRGWNSAYLD-R-PLIAGLAPETLSGHIGQRIRWAQGMMQIFRL-DNPLLK- 389 (713)
T ss_pred ---------CCCCCCCcCcHHHHHHHHHHcCCeEEEec-c-ccccccCCCCHHHHHHHHHHHhcChHHHHhh-hCcccc-
Confidence 58999999999999999999999999975 4 3558999999999999999999999999974 688877
Q ss_pred hccCchHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccchhhHHHHHHHHHHHHHHHHHHH-HHhCCchhh
Q 014850 291 LIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEY-IQAGLSIRS 369 (417)
Q Consensus 291 ~~~~l~~~qrl~y~~~~~~~l~~~~~l~~~l~P~l~l~~g~~~~p~~~~~~~~l~~~~f~~~~~~~ll~~-~~~g~~~~~ 369 (417)
+++++.||++|+.+++|++.+++.++|+++|++++++|.++++. +...+ ++.++++++..++.+ ...|.....
T Consensus 390 --~gl~~~qrl~y~~~~~~~~~~~~~~~~~~~P~~~l~~~~~~~~~-~~~~~---~~~~lp~~~~~~~~~~~~~~~~~~~ 463 (713)
T TIGR03030 390 --RGLSFPQRLCYLNAMLFWFFPLPRVIFLTAPLAYLFFGLNIFVA-SALEI---LAYALPHMLHSLLTNSYLFGRVRWP 463 (713)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceeC-CHHHH---HHHHHHHHHHHHHHHHHHcCCeecc
Confidence 79999999999999999999999999999999999999876664 22222 233445555555443 345666677
Q ss_pred hHhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEeCcCCCcccc
Q 014850 370 WWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQR 415 (417)
Q Consensus 370 ~w~~~~~w~i~~~~~~~~a~~~~ll~~l~~~~~~F~VTpK~~~~~~ 415 (417)
||++ ++..+.++ +.+..++.+.+++++.+|+|||||+..++
T Consensus 464 ~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~ 504 (713)
T TIGR03030 464 FWSE----VYETVLAV-YLLPPVLVTLLNPKKPKFNVTPKGELLDE 504 (713)
T ss_pred hHHH----HHHHHHHH-HHHHHHHHHHhCcCCCCceecCCCccccc
Confidence 8865 34444443 55566666778999999999999987554
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=2.4e-32 Score=294.86 Aligned_cols=237 Identities=18% Similarity=0.181 Sum_probs=177.7
Q ss_pred CccCCCc--eEEEEEcCCCCC----C--------C---CCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEE
Q 014850 8 ERMNHPT--IVKVISENKGGL----S--------D---EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFML 70 (417)
Q Consensus 8 ~~~~~p~--~~~v~~~~~~~~----~--------~---~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~ 70 (417)
.++|||. .+-|++|.++++ + . ..+++.|.+|++|. +.||||||++++..+ .++|||+
T Consensus 152 ~~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R~~n~----~~KaGNl~~~~~~~~--~~~eyiv 225 (691)
T PRK05454 152 AATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRRRRNV----GRKAGNIADFCRRWG--GAYDYMV 225 (691)
T ss_pred HhcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEECCcCC----CccHHHHHHHHHhcC--CCcCEEE
Confidence 3456754 456666666654 0 1 14589999999885 689999999998543 6789999
Q ss_pred EecCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCc---ccc-----hHHHHhHhhhhhhhcC--CceecccCc
Q 014850 71 NVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR---PEN-----LCILNEYIGKGIVGIQ--GPFYQGTGT 140 (417)
Q Consensus 71 vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~---~~~-----~~~f~~~~~~g~~~~~--~~~~~Gtg~ 140 (417)
++|||++ +.+|+|++++++|. .||++|+||+++.+++. ++. ..++.+....|.+.++ ...|+|+|+
T Consensus 226 vLDADs~-m~~d~L~~lv~~m~---~dP~vGlVQt~~~~~n~~slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~na 301 (691)
T PRK05454 226 VLDADSL-MSGDTLVRLVRLME---ANPRAGLIQTLPVAVGADTLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNA 301 (691)
T ss_pred EEcCCCC-CCHHHHHHHHHHHh---hCcCEEEEeCCccCcCCCCHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceE
Confidence 9999997 58999999999995 68999999999988732 111 1233345567777665 356899999
Q ss_pred eeecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccc
Q 014850 141 FHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEV 220 (417)
Q Consensus 141 ~~Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~ 220 (417)
++||+++.+.+- + ..+.| .+
T Consensus 302 IiR~~af~~~~g-------------l---------------p~L~g--------------------------------~~ 321 (691)
T PRK05454 302 IIRVKAFAEHCG-------------L---------------PPLPG--------------------------------RG 321 (691)
T ss_pred EEEHHHHHHhcC-------------C---------------ccccc--------------------------------cC
Confidence 999999864320 0 00111 25
Q ss_pred cccCcccchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHH
Q 014850 221 GCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQC 300 (417)
Q Consensus 221 G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qr 300 (417)
||..++++||++++.+|+++|||++|+ |+....++++|+|+.++++||.||++|++|++.. +.. +++++.+|
T Consensus 322 p~~~~~LseD~~~a~~l~~~GyrV~~~-pd~~~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~~----l~~---~gl~~~~R 393 (691)
T PRK05454 322 PFGGHILSHDFVEAALMRRAGWGVWLA-PDLPGSYEELPPNLLDELKRDRRWCQGNLQHLRL----LLA---KGLHPVSR 393 (691)
T ss_pred CCCCCcccHHHHHHHHHHHCCCEEEEc-CccccccccCCCCHHHHHHHHHHHHhchHHHHHH----HHh---cCCCHHHH
Confidence 888899999999999999999999995 5533457799999999999999999999998742 333 78999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHH
Q 014850 301 LAYLWILTWGLRSIPELCYIAL 322 (417)
Q Consensus 301 l~y~~~~~~~l~~~~~l~~~l~ 322 (417)
++++...+.++.+...++++++
T Consensus 394 ~~~l~g~~~yl~~P~wll~l~l 415 (691)
T PRK05454 394 LHFLTGIMSYLSAPLWLLFLLL 415 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9998876666665544444433
No 14
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.98 E-value=3.6e-30 Score=267.31 Aligned_cols=193 Identities=16% Similarity=0.104 Sum_probs=149.7
Q ss_pred CccCCCce-EEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCC
Q 014850 8 ERMNHPTI-VKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 78 (417)
Q Consensus 8 ~~~~~p~~-~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~ 78 (417)
.+++||+. +-|++|+++|+ ..+.|+++++++++| ++||+|+|.|++ .+++|+++++|||++
T Consensus 98 l~q~yp~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~n-----~Gka~AlN~gl~----~a~~d~iv~lDAD~~- 167 (444)
T PRK14583 98 LAQTYTNIEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAHN-----QGKAIALRMGAA----AARSEYLVCIDGDAL- 167 (444)
T ss_pred HcCCCCCeEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCCC-----CCHHHHHHHHHH----hCCCCEEEEECCCCC-
Confidence 46788874 33444555543 135788999988766 469999999998 479999999999996
Q ss_pred CchHHHHHHHHHhhCCCCCCcEEEEeCCccccCc---ccc-----hHHHHhHhhhhhhhcCCcee-cccCceeecccccc
Q 014850 79 NNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR---PEN-----LCILNEYIGKGIVGIQGPFY-QGTGTFHRRDVVYG 149 (417)
Q Consensus 79 p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~---~~~-----~~~f~~~~~~g~~~~~~~~~-~Gtg~~~Rr~al~~ 149 (417)
++||+|++++..|. .++++|+||+.....++ .+. ...++..+.++.+..+..++ .|+++++||+++.+
T Consensus 168 ~~~d~L~~lv~~~~---~~~~~g~v~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~~ 244 (444)
T PRK14583 168 LDKNAVPYLVAPLI---ANPRTGAVTGNPRIRTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALAD 244 (444)
T ss_pred cCHHHHHHHHHHHH---hCCCeEEEEccceecCCCcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHHH
Confidence 69999999999885 57899999997765421 111 22233445555555555554 68889999999743
Q ss_pred cccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccch
Q 014850 150 LCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAE 229 (417)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltE 229 (417)
+ |||++++++|
T Consensus 245 v---------------------------------------------------------------------Gg~~~~~i~E 255 (444)
T PRK14583 245 V---------------------------------------------------------------------GYWSPDMITE 255 (444)
T ss_pred c---------------------------------------------------------------------CCCCCCcccc
Confidence 2 5899999999
Q ss_pred hHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHhhc
Q 014850 230 DNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKR 284 (417)
Q Consensus 230 D~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~ 284 (417)
|+++++||+++||++.|+ |+. ...+++|+|++++++||.||++|.+|+++++.
T Consensus 256 D~dl~~rl~~~G~~i~~~-p~a-~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~ 308 (444)
T PRK14583 256 DIDISWKLQLKHWSVFFE-PRG-LCWILMPETLRGLWKQRLRWAQGGAEVFLKNM 308 (444)
T ss_pred cHHHHHHHHHcCCeEEEe-ecc-EEeeeCCCCHHHHHHHHHHHhCcHHHHHHHHH
Confidence 999999999999999995 654 55779999999999999999999999997643
No 15
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=99.98 E-value=1.1e-31 Score=259.30 Aligned_cols=178 Identities=17% Similarity=0.238 Sum_probs=142.4
Q ss_pred CCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccc
Q 014850 30 IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 109 (417)
Q Consensus 30 ~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f 109 (417)
.++++|++|++++ |.||||||+++... .+++|||+++|||++ ++||+|.+++++|. .||++|+||+|+++
T Consensus 66 ~~~v~~~~r~~~~----g~Kag~l~~~~~~~--~~~~~~i~~~DaD~~-~~p~~l~~~v~~~~---~~~~vg~vq~~~~~ 135 (254)
T cd04191 66 QGRIYYRRRRENT----GRKAGNIADFCRRW--GSRYDYMVVLDADSL-MSGDTIVRLVRRME---ANPRAGIIQTAPKL 135 (254)
T ss_pred CCcEEEEEcCCCC----CccHHHHHHHHHHh--CCCCCEEEEEeCCCC-CCHHHHHHHHHHHH---hCCCEEEEeCCcee
Confidence 5789999999985 78999999999842 268999999999996 69999999999995 58999999999998
Q ss_pred cC--cccc------hHHHHhHhhhhhhhcCC--ceecccCceeecccccccccchhhcccchhHHHHHHhhCCcHHHHHH
Q 014850 110 YD--RPEN------LCILNEYIGKGIVGIQG--PFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKS 179 (417)
Q Consensus 110 ~d--~~~~------~~~f~~~~~~g~~~~~~--~~~~Gtg~~~Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s 179 (417)
++ .+.+ ...|...++.|++.+++ .+|+|++.++||++|+.++.
T Consensus 136 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~--------------------------- 188 (254)
T cd04191 136 IGAETLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCA--------------------------- 188 (254)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhcC---------------------------
Confidence 83 2211 23344556677776543 57899999999999864310
Q ss_pred HHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCCceeecccC
Q 014850 180 AAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCAS 259 (417)
Q Consensus 180 ~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P 259 (417)
+..|+| .+||..++++||+++|++++.+||+++|. |......+++|
T Consensus 189 -~~~i~g--------------------------------~g~~~~~~l~eD~~l~~~~~~~G~ri~~~-~~~~~~~~~~p 234 (254)
T cd04191 189 -LPVLPG--------------------------------RPPFGGHILSHDFVEAALMRRAGWEVRLA-PDLEGSYEECP 234 (254)
T ss_pred -CccccC--------------------------------CCCCCCCeecHHHHHHHHHHHcCCEEEEc-cCCcceEeECC
Confidence 000111 25788899999999999999999999995 65444577999
Q ss_pred CChhHHHHHHHHHhhhhhH
Q 014850 260 PSGPAGMRQQKRWATGLLE 278 (417)
Q Consensus 260 ~tl~~~~~Qr~RWa~G~~q 278 (417)
+|++++++||.||++|++|
T Consensus 235 ~~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 235 PTLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred CCHHHHHHHHHHHHhhcCc
Confidence 9999999999999999988
No 16
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.97 E-value=4.4e-28 Score=249.18 Aligned_cols=192 Identities=18% Similarity=0.201 Sum_probs=147.5
Q ss_pred CccCCCc-eEEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCC
Q 014850 8 ERMNHPT-IVKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 78 (417)
Q Consensus 8 ~~~~~p~-~~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~ 78 (417)
.+++||+ ++-|++|.++|+ ..+.|+++++++++| .+||+|+|.|++ .+++|+++++|||.+
T Consensus 77 ~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n-----~Gka~aln~g~~----~a~~d~i~~lDaD~~- 146 (420)
T PRK11204 77 LALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAEN-----QGKANALNTGAA----AARSEYLVCIDGDAL- 146 (420)
T ss_pred HhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCC-----CCHHHHHHHHHH----HcCCCEEEEECCCCC-
Confidence 4678886 555666666664 235789999998776 469999999999 479999999999996
Q ss_pred CchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcc---cc-----hHHHHhHhhhhhhhcCCcee-cccCceeecccccc
Q 014850 79 NNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRP---EN-----LCILNEYIGKGIVGIQGPFY-QGTGTFHRRDVVYG 149 (417)
Q Consensus 79 p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~---~~-----~~~f~~~~~~g~~~~~~~~~-~Gtg~~~Rr~al~~ 149 (417)
++||+|.+++..|. .+|++++||+.....+.. +. ....+.....+....+...+ .|+++++||+++.+
T Consensus 147 ~~~d~L~~l~~~~~---~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~ 223 (420)
T PRK11204 147 LDPDAAAYMVEHFL---HNPRVGAVTGNPRIRNRSTLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHE 223 (420)
T ss_pred CChhHHHHHHHHHH---hCCCeEEEECCceeccchhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHHH
Confidence 69999999999995 578999999877655321 11 11112222233333333433 67888899988742
Q ss_pred cccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccch
Q 014850 150 LCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAE 229 (417)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltE 229 (417)
.|||+++.++|
T Consensus 224 ---------------------------------------------------------------------vgg~~~~~~~E 234 (420)
T PRK11204 224 ---------------------------------------------------------------------VGYWSTDMITE 234 (420)
T ss_pred ---------------------------------------------------------------------hCCCCCCcccc
Confidence 25899999999
Q ss_pred hHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHhh
Q 014850 230 DNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSK 283 (417)
Q Consensus 230 D~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~ 283 (417)
|+++++|++++||++.|+ |+. .++++.|+|++++++||+||++|++|.++++
T Consensus 235 D~~l~~rl~~~G~~i~~~-p~~-~~~~~~p~t~~~~~~Qr~RW~~G~~~~l~~~ 286 (420)
T PRK11204 235 DIDISWKLQLRGWDIRYE-PRA-LCWILMPETLKGLWKQRLRWAQGGAEVLLKN 286 (420)
T ss_pred hHHHHHHHHHcCCeEEec-ccc-EEEeECcccHHHHHHHHHHHhcCHHHHHHHH
Confidence 999999999999999995 664 4577999999999999999999999999763
No 17
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.95 E-value=2.1e-27 Score=243.98 Aligned_cols=193 Identities=22% Similarity=0.224 Sum_probs=144.8
Q ss_pred CCccCCCc-eEEEEEcCCCCC--------CCCC-CcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCC
Q 014850 7 TERMNHPT-IVKVISENKGGL--------SDEI-PHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM 76 (417)
Q Consensus 7 ~~~~~~p~-~~~v~~~~~~~~--------~~~~-p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~ 76 (417)
...+|||+ .+-|++|+++|+ ..+. |+++.+..++ .+++|++|+|++++ .+++|+|+++|||+
T Consensus 77 ~~~~dyp~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~gK~~al~~~l~----~~~~d~V~~~DaD~ 148 (439)
T COG1215 77 LLSQDYPRYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYPEK----KNGGKAGALNNGLK----RAKGDVVVILDADT 148 (439)
T ss_pred HHhCCCCCceEEEECCCCChhHHHHHHHHHhhcCcceEEEeccc----cCccchHHHHHHHh----hcCCCEEEEEcCCC
Confidence 35789998 555555656555 2344 5777774312 24799999999999 57899999999999
Q ss_pred CCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcc-cc-----hHHHHhH----h-hhhhhhcCCceecccCceeecc
Q 014850 77 YANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRP-EN-----LCILNEY----I-GKGIVGIQGPFYQGTGTFHRRD 145 (417)
Q Consensus 77 ~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~-~~-----~~~f~~~----~-~~g~~~~~~~~~~Gtg~~~Rr~ 145 (417)
+ |+||+|++++++|. +++.++.+|+|+.+..+. .+ ....+.. . ..+.+.....+++|+++++||+
T Consensus 149 ~-~~~d~l~~~~~~f~---~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~ 224 (439)
T COG1215 149 V-PEPDALRELVSPFE---DPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRS 224 (439)
T ss_pred C-CChhHHHHHHhhhc---CCCeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHH
Confidence 6 79999999999995 334456889997766321 11 1111111 1 1122222456789999999999
Q ss_pred cccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCc
Q 014850 146 VVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYG 225 (417)
Q Consensus 146 al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~ 225 (417)
+|.++ |||..+
T Consensus 225 aL~~~---------------------------------------------------------------------g~~~~~ 235 (439)
T COG1215 225 ALEEV---------------------------------------------------------------------GGWLED 235 (439)
T ss_pred HHHHh---------------------------------------------------------------------CCCCCC
Confidence 98532 579999
Q ss_pred ccchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHh
Q 014850 226 ATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFS 282 (417)
Q Consensus 226 ~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~ 282 (417)
++|||.+++++|+.+|||+.|++ + +.+.+++|+|+.++++||.||++|++|++..
T Consensus 236 ~i~ED~~lt~~l~~~G~~~~~~~-~-~~~~~~~p~t~~~~~~Qr~RW~~g~~~~~~~ 290 (439)
T COG1215 236 TITEDADLTLRLHLRGYRVVYVP-E-AIVWTEAPETLKELWRQRLRWARGGLQVLLL 290 (439)
T ss_pred ceeccHHHHHHHHHCCCeEEEee-c-ceEeeeCcccHHHHHHHHHHHHcccceeeeh
Confidence 99999999999999999999964 4 4568899999999999999999999999964
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.95 E-value=7.2e-26 Score=234.88 Aligned_cols=237 Identities=15% Similarity=0.112 Sum_probs=158.5
Q ss_pred CccCCCc---eEEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCC
Q 014850 8 ERMNHPT---IVKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM 76 (417)
Q Consensus 8 ~~~~~p~---~~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~ 76 (417)
.+++||. .|-|++|+++|. ..+.|++..+..+++ ++||+|+|.|++ .+++|||+++|||+
T Consensus 72 ~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~~~~~~-----~Gka~AlN~gl~----~s~g~~v~~~DaD~ 142 (439)
T TIGR03111 72 YNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRYMNSD-----QGKAKALNAAIY----NSIGKYIIHIDSDG 142 (439)
T ss_pred HhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEEEeCCC-----CCHHHHHHHHHH----HccCCEEEEECCCC
Confidence 4688987 356666777664 135677766655444 589999999999 47899999999999
Q ss_pred CCCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc-Cccc-------c---hHHHHhH---hhhhh---hhcCCce-eccc
Q 014850 77 YANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-DRPE-------N---LCILNEY---IGKGI---VGIQGPF-YQGT 138 (417)
Q Consensus 77 ~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~-d~~~-------~---~~~f~~~---~~~g~---~~~~~~~-~~Gt 138 (417)
+ ++||+|++++..|. .||++++|+..+.-. +... . ...+++. ...|+ ...+..+ +.|+
T Consensus 143 ~-~~~d~L~~l~~~f~---~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~r~~~s~~~~~~~~sGa 218 (439)
T TIGR03111 143 K-LHKDAIKNMVTRFE---NNPDIHAMTGVILTDKELIEKTKGRFLKLIRRCEYFEYAQAFLAGRNFESQVNSLFTLSGA 218 (439)
T ss_pred C-cChHHHHHHHHHHH---hCCCeEEEEeEEecCchhhhhhcchhhhHhHHhHHHHHHHHHHhhhHHHHhcCCeEEEccH
Confidence 6 69999999999995 567888776544321 1000 0 0001111 01111 1122222 3566
Q ss_pred CceeecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccc
Q 014850 139 GTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGD 218 (417)
Q Consensus 139 g~~~Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~ 218 (417)
++++||+++..
T Consensus 219 ~~~~Rr~~l~~--------------------------------------------------------------------- 229 (439)
T TIGR03111 219 FSAFRRETILK--------------------------------------------------------------------- 229 (439)
T ss_pred HHhhhHHHHHH---------------------------------------------------------------------
Confidence 67788877632
Q ss_pred cccccCcccchhHHHHHHHHh-CCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchH
Q 014850 219 EVGCLYGATAEDNLTGLVIHS-KGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQF 297 (417)
Q Consensus 219 ~~G~~~~~ltED~~~s~rl~~-~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~ 297 (417)
.|||+.++++||++++++++. .|+|+.|+ |+. .+..+.|+|++++++||.||++|.+|++....++... +..++
T Consensus 230 vggf~~~~i~ED~~l~~rl~~~~g~kv~~~-~~a-~~~~~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~~---~~~~~ 304 (439)
T TIGR03111 230 TQLYNSETVGEDTDMTFQIRELLDGKVYLC-ENA-IFYVDPIDGLNKLYTQRQRWQRGELEVSHMFFESANK---SIKGF 304 (439)
T ss_pred hCCCCCCCcCccHHHHHHHHHhcCCeEEEC-CCC-EEEEECCcCHHHHHHHHHHHhccHHHHHHHHHhhhhh---chhhh
Confidence 258999999999999999975 69999985 554 4566899999999999999999999999653333332 34555
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCC
Q 014850 298 RQCLAYLWILTWGLRSIPELCYIALPAYCIITNS 331 (417)
Q Consensus 298 ~qrl~y~~~~~~~l~~~~~l~~~l~P~l~l~~g~ 331 (417)
.++..+..........++..++.++++++.+++.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (439)
T TIGR03111 305 FSNFMVRRIMYDHTFAFPRMIWYFAMIFLIFLGY 338 (439)
T ss_pred hhHHHHHHHHhhHhhHHHHHHHHHHHHHHHHhcc
Confidence 5555443322333335566677777777776663
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.95 E-value=1.8e-25 Score=234.13 Aligned_cols=224 Identities=16% Similarity=0.076 Sum_probs=151.1
Q ss_pred CccCCCce-EEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcC--CCC---CCCEEEEec
Q 014850 8 ERMNHPTI-VKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSG--LMT---NAPFMLNVD 73 (417)
Q Consensus 8 ~~~~~p~~-~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~--~~~---~~e~v~vlD 73 (417)
...|||+. |-|+.|++++. ..++|+++.+.-+ ++| ..+||+|||.+++... ... ++|+|+++|
T Consensus 90 ~~ldY~~~eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv~~-~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~D 166 (504)
T PRK14716 90 ATLDYENYRIFVGTYPNDPATLREVDRLAARYPRVHLVIVP-HDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHD 166 (504)
T ss_pred HcCCCCCeEEEEEECCCChhHHHHHHHHHHHCCCeEEEEeC-CCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEc
Confidence 35789984 55555555543 2358988765533 222 2689999999987531 112 349999999
Q ss_pred CCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccc-------hHHH---HhHhhhhhhhcCCce-ecccCcee
Q 014850 74 CDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-------LCIL---NEYIGKGIVGIQGPF-YQGTGTFH 142 (417)
Q Consensus 74 aD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~-------~~~f---~~~~~~g~~~~~~~~-~~Gtg~~~ 142 (417)
||.+ ++|++|+....++ ++.++||.|....++..+ ...| +...+..++.+++++ ++|+|+++
T Consensus 167 AD~~-v~Pd~Lr~~~~~~------~~~~~VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~af 239 (504)
T PRK14716 167 AEDV-IHPLELRLYNYLL------PRHDFVQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAF 239 (504)
T ss_pred CCCC-cCccHHHHHHhhc------CCCCEEecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEe
Confidence 9997 5999998765443 345789998765422111 1112 122345567777775 68999999
Q ss_pred ecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccc-c
Q 014850 143 RRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEV-G 221 (417)
Q Consensus 143 Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~-G 221 (417)
||++|+.+. . +- .| +
T Consensus 240 RR~aLe~l~---------------------------------~------------------~~-------------GG~~ 255 (504)
T PRK14716 240 SRRALERLA---------------------------------A------------------ER-------------GGQP 255 (504)
T ss_pred EHHHHHHHH---------------------------------h------------------hc-------------CCCC
Confidence 999985321 0 00 02 3
Q ss_pred ccCcccchhHHHHHHHHhCCCeEEEecCCC--------------ceeecccCCChhHHHHHHHHHhhhh-hHHHHhhcch
Q 014850 222 CLYGATAEDNLTGLVIHSKGWRSGYCLPIP--------------HAFLGCASPSGPAGMRQQKRWATGL-LEILFSKRNP 286 (417)
Q Consensus 222 ~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~--------------~~~~G~~P~tl~~~~~Qr~RWa~G~-~qi~~~~~~p 286 (417)
|+++++|||+++|++|.++|||++|+ |.. .++.+++|+|+++++|||.||++|. +|...+..+.
T Consensus 256 fd~~sLTED~dLglRL~~~G~rv~y~-p~ai~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~ 334 (504)
T PRK14716 256 FDSDSLTEDYDIGLRLKRAGFRQIFV-RVRADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWK 334 (504)
T ss_pred CCCCCcchHHHHHHHHHHCCCEEEEe-cccccccccccccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCC
Confidence 99999999999999999999999996 443 1345789999999999999999995 7887531111
Q ss_pred hhhhhccCchHhHHHHHHHHH
Q 014850 287 ILATLIGKLQFRQCLAYLWIL 307 (417)
Q Consensus 287 ~~~~~~~~l~~~qrl~y~~~~ 307 (417)
--. ..+.+.+++|...+..+
T Consensus 335 ~~~-~~~~~~~rdr~~~~~~~ 354 (504)
T PRK14716 335 GPA-ATKYMLWRDRKGLLTNL 354 (504)
T ss_pred Cch-hhhhhHHHHHHHHHHHH
Confidence 111 12456778888766654
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.91 E-value=7.8e-24 Score=199.73 Aligned_cols=184 Identities=18% Similarity=0.212 Sum_probs=136.1
Q ss_pred CccCCCc---eEEEEEcCCCCC-----C-------CCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEe
Q 014850 8 ERMNHPT---IVKVISENKGGL-----S-------DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNV 72 (417)
Q Consensus 8 ~~~~~p~---~~~v~~~~~~~~-----~-------~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vl 72 (417)
..++||. +|.|+++ ++|. . ...+++.++.+.++. |+|++|+|.|++ .+++|||+++
T Consensus 24 ~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~----G~k~~a~n~g~~----~a~~~~i~~~ 94 (232)
T cd06437 24 CALDYPKDRLEIQVLDD-STDETVRLAREIVEEYAAQGVNIKHVRRADRT----GYKAGALAEGMK----VAKGEYVAIF 94 (232)
T ss_pred HhcCCCccceEEEEEEC-CCCcHHHHHHHHHHHHhhcCCceEEEECCCCC----CCchHHHHHHHH----hCCCCEEEEE
Confidence 3578885 4445544 5543 0 135788888888764 679999999999 5799999999
Q ss_pred cCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccc-h--------HHHHhHhhhhhhhcCCce-ecccCcee
Q 014850 73 DCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-L--------CILNEYIGKGIVGIQGPF-YQGTGTFH 142 (417)
Q Consensus 73 DaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~-~--------~~f~~~~~~g~~~~~~~~-~~Gtg~~~ 142 (417)
|||.+ ++|++|.+++.++ .++++++||++..+.+.-.+ . ..++.....+....+... ++|+++++
T Consensus 95 DaD~~-~~~~~l~~~~~~~----~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 169 (232)
T cd06437 95 DADFV-PPPDFLQKTPPYF----ADPKLGFVQTRWGHINANYSLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVW 169 (232)
T ss_pred cCCCC-CChHHHHHhhhhh----cCCCeEEEecceeeEcCCCchhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhh
Confidence 99997 5899999987776 56889999987665432222 1 112333333333333332 47888888
Q ss_pred ecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccc
Q 014850 143 RRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGC 222 (417)
Q Consensus 143 Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~ 222 (417)
||+++..+ |||
T Consensus 170 rr~~~~~v---------------------------------------------------------------------gg~ 180 (232)
T cd06437 170 RKECIEDA---------------------------------------------------------------------GGW 180 (232)
T ss_pred hHHHHHHh---------------------------------------------------------------------CCC
Confidence 88887421 588
Q ss_pred cCcccchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhh
Q 014850 223 LYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGL 276 (417)
Q Consensus 223 ~~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~ 276 (417)
+..++.||+++++|++.+||++.|+ |+. .+..+.|+|++++++||.||++|.
T Consensus 181 ~~~~~~ED~~l~~rl~~~G~~~~~~-~~~-~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 181 NHDTLTEDLDLSYRAQLKGWKFVYL-DDV-VVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred CCCcchhhHHHHHHHHHCCCeEEEe-ccc-eeeeeCCcCHHHHHHHHHHhccCC
Confidence 8888999999999999999999995 654 557899999999999999999994
No 21
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.91 E-value=1.7e-22 Score=219.59 Aligned_cols=200 Identities=17% Similarity=0.166 Sum_probs=136.1
Q ss_pred ccCCCceEEEEEc--CCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCC-----CCCCCEEEEec
Q 014850 9 RMNHPTIVKVISE--NKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGL-----MTNAPFMLNVD 73 (417)
Q Consensus 9 ~~~~p~~~~v~~~--~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~-----~~~~e~v~vlD 73 (417)
.+|||+ .+|+.. .+|+. ..++|+++.+..++ +| .++||+|||+++..... ....++++++|
T Consensus 88 ~ldYP~-~eI~vi~~~nD~~T~~~~~~l~~~~p~~~~v~~~~-~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~D 163 (727)
T PRK11234 88 TLDYEN-YHIFVGTYPNDPATQADVDAVCARFPNVHKVVCAR-PG--PTSKADCLNNVLDAITQFERSANFAFAGFILHD 163 (727)
T ss_pred hCCCCC-eEEEEEecCCChhHHHHHHHHHHHCCCcEEEEeCC-CC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEc
Confidence 689999 455543 22222 23578876555443 22 25899999999986411 12457789999
Q ss_pred CCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccc----------hHHHHhHhhhhhhhcCCce-ecccCcee
Q 014850 74 CDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN----------LCILNEYIGKGIVGIQGPF-YQGTGTFH 142 (417)
Q Consensus 74 aD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~----------~~~f~~~~~~g~~~~~~~~-~~Gtg~~~ 142 (417)
||.+ ++||+|+ .+.++. ++. ++||+|....++..+ +...+.....+++.+++++ +.|+|+.|
T Consensus 164 AD~~-v~pd~L~-~~~~l~----~~~-~~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af 236 (727)
T PRK11234 164 AEDV-ISPMELR-LFNYLV----ERK-DLIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCF 236 (727)
T ss_pred CCCC-CChhHHH-HHHhhc----CCC-CeEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEE
Confidence 9996 6999998 677774 344 899999664332111 1122234467788886665 58899999
Q ss_pred ecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccc
Q 014850 143 RRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGC 222 (417)
Q Consensus 143 Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~ 222 (417)
.|+++.. +.++|. ..+|
T Consensus 237 ~Rr~l~a----------------------------------------------------l~~~gg-----------g~~~ 253 (727)
T PRK11234 237 SRRAVTA----------------------------------------------------LLEDGD-----------GIAF 253 (727)
T ss_pred ecccHHH----------------------------------------------------HHHhcC-----------CCCc
Confidence 5554311 001110 0169
Q ss_pred cCcccchhHHHHHHHHhCCCeEEEecC-----C----------------CceeecccCCChhHHHHHHHHHhhh-hhHHH
Q 014850 223 LYGATAEDNLTGLVIHSKGWRSGYCLP-----I----------------PHAFLGCASPSGPAGMRQQKRWATG-LLEIL 280 (417)
Q Consensus 223 ~~~~ltED~~~s~rl~~~Gwr~~y~~p-----~----------------~~~~~G~~P~tl~~~~~Qr~RWa~G-~~qi~ 280 (417)
+.+++|||+++|++|+.+||+++|++. + ..+++++.|+|+++.++||.||.+| .+|.+
T Consensus 254 ~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~ 333 (727)
T PRK11234 254 DVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGF 333 (727)
T ss_pred CCCcchHHHHHHHHHHHCCCEEEEcccccccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHH
Confidence 999999999999999999999999641 0 1346778999999999999999999 68877
Q ss_pred Hh
Q 014850 281 FS 282 (417)
Q Consensus 281 ~~ 282 (417)
..
T Consensus 334 ~~ 335 (727)
T PRK11234 334 KT 335 (727)
T ss_pred HH
Confidence 43
No 22
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.89 E-value=2.6e-22 Score=189.16 Aligned_cols=193 Identities=22% Similarity=0.252 Sum_probs=140.6
Q ss_pred CccCCCce-EEEEEcCCCCCCC---------C-CCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCC
Q 014850 8 ERMNHPTI-VKVISENKGGLSD---------E-IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM 76 (417)
Q Consensus 8 ~~~~~p~~-~~v~~~~~~~~~~---------~-~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~ 76 (417)
.++++|+. +-|++++++|... + .++++++..+++. |+|++|+|.|++.. ..++|||+++|+|.
T Consensus 22 ~~q~~~~~eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~~----G~~~~a~n~g~~~a--~~~~d~i~~lD~D~ 95 (236)
T cd06435 22 AALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLP----GAKAGALNYALERT--APDAEIIAVIDADY 95 (236)
T ss_pred HhCCCCCcEEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCC----CCchHHHHHHHHhc--CCCCCEEEEEcCCC
Confidence 46778875 4444555554321 1 2478888877664 57999999999953 24589999999999
Q ss_pred CCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccc-hH--------HHHhHhhhhhhhcCCceecccCceeecccc
Q 014850 77 YANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-LC--------ILNEYIGKGIVGIQGPFYQGTGTFHRRDVV 147 (417)
Q Consensus 77 ~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~-~~--------~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al 147 (417)
+ +.|++|.+++..| .++++++|+++..+.+...+ .. .++..........+...+.|+++++||+++
T Consensus 96 ~-~~~~~l~~l~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~ 170 (236)
T cd06435 96 Q-VEPDWLKRLVPIF----DDPRVGFVQAPQDYRDGEESLFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSAL 170 (236)
T ss_pred C-cCHHHHHHHHHHh----cCCCeeEEecCccccCCCccHHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHH
Confidence 7 5899999999988 46789999998765532222 11 111111112222333456788889999987
Q ss_pred cccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCccc
Q 014850 148 YGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGAT 227 (417)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~l 227 (417)
..+ |||+....
T Consensus 171 ~~i---------------------------------------------------------------------Ggf~~~~~ 181 (236)
T cd06435 171 DDV---------------------------------------------------------------------GGWDEWCI 181 (236)
T ss_pred HHh---------------------------------------------------------------------CCCCCccc
Confidence 422 47887788
Q ss_pred chhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHh
Q 014850 228 AEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFS 282 (417)
Q Consensus 228 tED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~ 282 (417)
.||.++++|++.+||++.|+ |+. ......|+++.++++||.||++|++|++.+
T Consensus 182 ~eD~dl~~r~~~~G~~~~~~-~~~-~~~~~~~~~~~~~~~q~~rw~~g~~~~~~~ 234 (236)
T cd06435 182 TEDSELGLRMHEAGYIGVYV-AQS-YGHGLIPDTFEAFKKQRFRWAYGAVQILKK 234 (236)
T ss_pred cchHHHHHHHHHCCcEEEEc-chh-hccCcCcccHHHHHHHHHHHhcchhhhhhc
Confidence 99999999999999999995 554 446799999999999999999999999864
No 23
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.89 E-value=1.5e-22 Score=189.58 Aligned_cols=188 Identities=29% Similarity=0.464 Sum_probs=145.5
Q ss_pred ccCCCc---eEEEEEcCCCCC----C---CCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCC
Q 014850 9 RMNHPT---IVKVISENKGGL----S---DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 78 (417)
Q Consensus 9 ~~~~p~---~~~v~~~~~~~~----~---~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~ 78 (417)
.+++|. .+-|++|.+++. . ....+++++.++++. ++|+||+|.|++ .+++|||+++|+|.+
T Consensus 26 ~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~n~~~~----~a~~d~i~~lD~D~~- 96 (234)
T cd06421 26 AIDYPHDKLRVYVLDDGRRPELRALAAELGVEYGYRYLTRPDNR----HAKAGNLNNALA----HTTGDFVAILDADHV- 96 (234)
T ss_pred hcCCCcccEEEEEEcCCCchhHHHHHHHhhcccCceEEEeCCCC----CCcHHHHHHHHH----hCCCCEEEEEccccC-
Confidence 478888 566666666554 0 111256788877663 689999999999 479999999999997
Q ss_pred CchHHHHHHHHHhhCCCCCCcEEEEeCCccccC--cc---c----c-hHHHHhHhhhhhhhcCCceecccCceeeccccc
Q 014850 79 NNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYD--RP---E----N-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVY 148 (417)
Q Consensus 79 p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d--~~---~----~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~ 148 (417)
++|++|.+++..|. .++++++|++++.+.+ .. . . ...++.....+.+..+...+.|+++++||+++.
T Consensus 97 ~~~~~l~~l~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~ 173 (234)
T cd06421 97 PTPDFLRRTLGYFL---DDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALD 173 (234)
T ss_pred cCccHHHHHHHHHh---cCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHH
Confidence 58999999999984 4588999999988762 21 1 1 233444455555555667788999999999974
Q ss_pred ccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccc
Q 014850 149 GLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATA 228 (417)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~lt 228 (417)
.+ |||+...+.
T Consensus 174 ~i---------------------------------------------------------------------g~~~~~~~~ 184 (234)
T cd06421 174 EI---------------------------------------------------------------------GGFPTDSVT 184 (234)
T ss_pred Hh---------------------------------------------------------------------CCCCcccee
Confidence 22 477777889
Q ss_pred hhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHH
Q 014850 229 EDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEI 279 (417)
Q Consensus 229 ED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi 279 (417)
||++++.+++.+||+++|+ |+. ...++.|++++++++||.||.+|++|+
T Consensus 185 eD~~l~~r~~~~g~~i~~~-~~~-~~~~~~~~~~~~~~~q~~rw~~~~~~~ 233 (234)
T cd06421 185 EDLATSLRLHAKGWRSVYV-PEP-LAAGLAPETLAAYIKQRLRWARGMLQI 233 (234)
T ss_pred ccHHHHHHHHHcCceEEEe-cCc-cccccCCccHHHHHHHHHHHhcCCeee
Confidence 9999999999999999996 554 457899999999999999999999985
No 24
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.89 E-value=2.6e-22 Score=190.94 Aligned_cols=191 Identities=23% Similarity=0.330 Sum_probs=139.4
Q ss_pred CccCCCc---eEEEEEcCCCCC------CCC---CCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCC
Q 014850 8 ERMNHPT---IVKVISENKGGL------SDE---IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCD 75 (417)
Q Consensus 8 ~~~~~p~---~~~v~~~~~~~~------~~~---~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD 75 (417)
..++||+ +|.|++|+++|. .-. ..+++++...++ .+|++|+|.|++ .++||||+.+|||
T Consensus 24 ~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~-----~G~~~a~n~g~~----~a~gd~i~~~DaD 94 (241)
T cd06427 24 SALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQP-----RTKPKACNYALA----FARGEYVVIYDAE 94 (241)
T ss_pred HhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCCC-----CchHHHHHHHHH----hcCCCEEEEEcCC
Confidence 4578886 355566777664 111 224455444333 579999999999 5899999999999
Q ss_pred CCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccc-hH--------HHHhHhhhhhhhcCCce-ecccCceeecc
Q 014850 76 MYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-LC--------ILNEYIGKGIVGIQGPF-YQGTGTFHRRD 145 (417)
Q Consensus 76 ~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~-~~--------~f~~~~~~g~~~~~~~~-~~Gtg~~~Rr~ 145 (417)
.++ +|++|.+++.+|.+ .++++++||++..+++.-.+ .. .++....++....+... +.|+++++||+
T Consensus 95 ~~~-~~~~l~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~ 171 (241)
T cd06427 95 DAP-DPDQLKKAVAAFAR--LDDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTD 171 (241)
T ss_pred CCC-ChHHHHHHHHHHHh--cCCCEEEEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHH
Confidence 975 89999999999952 34789999988776632222 11 22233344444444444 35777888888
Q ss_pred cccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCc
Q 014850 146 VVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYG 225 (417)
Q Consensus 146 al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~ 225 (417)
++..+ |||.+.
T Consensus 172 ~~~~v---------------------------------------------------------------------gg~~~~ 182 (241)
T cd06427 172 VLREL---------------------------------------------------------------------GGWDPF 182 (241)
T ss_pred HHHHc---------------------------------------------------------------------CCCCcc
Confidence 87432 477777
Q ss_pred ccchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHh
Q 014850 226 ATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFS 282 (417)
Q Consensus 226 ~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~ 282 (417)
..+||+++++|++.+||++.++ |. .. ..+.|+|++++++||.||++|.+|++..
T Consensus 183 ~~~eD~~l~~rl~~~G~r~~~~-~~-~~-~~~~~~~~~~~~~q~~Rw~~g~~~~~~~ 236 (241)
T cd06427 183 NVTEDADLGLRLARAGYRTGVL-NS-TT-LEEANNALGNWIRQRSRWIKGYMQTWLV 236 (241)
T ss_pred cchhhHHHHHHHHHCCceEEEe-cc-cc-cccCcHhHHHHHHHHHHHhccHHHHHHH
Confidence 8899999999999999999997 44 33 4589999999999999999999999864
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.87 E-value=4.3e-23 Score=193.30 Aligned_cols=185 Identities=20% Similarity=0.269 Sum_probs=114.2
Q ss_pred CccCCCceEEEEEcCCCC-C-C-------CCCCc--EEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCC
Q 014850 8 ERMNHPTIVKVISENKGG-L-S-------DEIPH--LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM 76 (417)
Q Consensus 8 ~~~~~p~~~~v~~~~~~~-~-~-------~~~p~--l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~ 76 (417)
.+++||.+.-|+.|++.+ + . .++|. ++++.+++++| .++|++|+|.+++. .++|+|+++|+|.
T Consensus 24 ~~~~~~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~ 97 (228)
T PF13641_consen 24 LAQDYPRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDT 97 (228)
T ss_dssp TTSHHHTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSE
T ss_pred HcCCCCCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCc
Confidence 355676665555554443 3 1 24664 58898887642 24799999999994 6799999999999
Q ss_pred CCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccc-----hHHHHh----HhhhhhhhcCCceecccCceeecccc
Q 014850 77 YANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-----LCILNE----YIGKGIVGIQGPFYQGTGTFHRRDVV 147 (417)
Q Consensus 77 ~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~-----~~~f~~----~~~~g~~~~~~~~~~Gtg~~~Rr~al 147 (417)
+ ++|++|.+++.+| .++++++||++..+++ ..+ ...++. ....+....+..+++|+++++||+++
T Consensus 98 ~-~~p~~l~~~~~~~----~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~ 171 (228)
T PF13641_consen 98 V-LDPDWLERLLAAF----ADPGVGAVGGPVFPDN-DRNWLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSAL 171 (228)
T ss_dssp E-E-CHHHHHHHHHH----HBSS--EEEEEEEETT-CCCEEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHH
T ss_pred E-ECHHHHHHHHHHH----HhCCCCeEeeeEeecC-CCCHHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHH
Confidence 7 5999999999999 4678999998775542 111 111111 12233344455567899999999997
Q ss_pred cccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCccc
Q 014850 148 YGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGAT 227 (417)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~l 227 (417)
..+ |||++...
T Consensus 172 ~~~---------------------------------------------------------------------g~fd~~~~ 182 (228)
T PF13641_consen 172 EEV---------------------------------------------------------------------GGFDPFIL 182 (228)
T ss_dssp HHH----------------------------------------------------------------------S--SSSS
T ss_pred HHh---------------------------------------------------------------------CCCCCCCc
Confidence 421 47888888
Q ss_pred chhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhh
Q 014850 228 AEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATG 275 (417)
Q Consensus 228 tED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G 275 (417)
.||.+++.++..+||++.|+ |+ +.+..+.|.|++++++||.||++|
T Consensus 183 ~eD~~l~~r~~~~G~~~~~~-~~-~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 183 GEDFDLCLRLRAAGWRIVYA-PD-ALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp SHHHHHHHHHHHTT--EEEE-EE-EEEEE--SSSTHHHHHHHHHHH--
T ss_pred ccHHHHHHHHHHCCCcEEEE-CC-cEEEEeCCCCHHHHHHHHhccCcC
Confidence 99999999999999999996 55 455779999999999999999988
No 26
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.86 E-value=1e-19 Score=196.08 Aligned_cols=200 Identities=14% Similarity=0.084 Sum_probs=142.0
Q ss_pred CccCCCceEEEEE---cCCCCC-------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCC---CCCCCE--EEEe
Q 014850 8 ERMNHPTIVKVIS---ENKGGL-------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGL---MTNAPF--MLNV 72 (417)
Q Consensus 8 ~~~~~p~~~~v~~---~~~~~~-------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~---~~~~e~--v~vl 72 (417)
.+.|||+. +|++ +|++++ ..++|+++.+..+++. ..+||.|||+++..... ...++| |+++
T Consensus 95 ~~ldYp~~-~I~v~~~~nD~~T~~~~~~~~~~~p~~~~v~~~~~g---p~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~ 170 (703)
T PRK15489 95 ATLDYRRY-VIFVGTYPNDAETITEVERMRRRYKRLVRVEVPHDG---PTCKADCLNWIIQAIFRYEAGHGIEFAGVILH 170 (703)
T ss_pred hcCCCCCe-EEEEEecCCCccHHHHHHHHhccCCcEEEEEcCCCC---CCCHHHHHHHHHHHHHhhhhhccCccceEEEE
Confidence 36799987 5666 455543 2357999888876653 36899999999875311 123444 9999
Q ss_pred cCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc-Ccccc---------hHHHHhHhhhhhhhcCCcee-cccCce
Q 014850 73 DCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-DRPEN---------LCILNEYIGKGIVGIQGPFY-QGTGTF 141 (417)
Q Consensus 73 DaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~-d~~~~---------~~~f~~~~~~g~~~~~~~~~-~Gtg~~ 141 (417)
|||.+ |+|++|+.. .+++ .++ .+||.|-.=. ++..+ +...++..+.++..+++++. -|||+.
T Consensus 171 DAEd~-~~P~~L~~~-~~~~---~~~--~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~ 243 (703)
T PRK15489 171 DSEDV-LHPLELKYF-NYLL---PRK--DLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTC 243 (703)
T ss_pred cCCCC-CChhHHHHH-Hhhc---CCc--ceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCccee
Confidence 99995 799999764 6665 233 4688773211 22111 33455667788888888876 679999
Q ss_pred eecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCcccccc
Q 014850 142 HRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVG 221 (417)
Q Consensus 142 ~Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G 221 (417)
|||++|..+. + .| .| .+
T Consensus 244 frr~aL~~l~---------------------------------~-------------------~g--------g~---~~ 260 (703)
T PRK15489 244 FSRRALLALM---------------------------------K-------------------ER--------GN---QP 260 (703)
T ss_pred eeHHHHHHHH---------------------------------H-------------------hc--------CC---CC
Confidence 9999985320 0 00 00 15
Q ss_pred ccCcccchhHHHHHHHHhCCCeEEEec-C--------------------CCceeecccCCChhHHHHHHHHHhhhhh-HH
Q 014850 222 CLYGATAEDNLTGLVIHSKGWRSGYCL-P--------------------IPHAFLGCASPSGPAGMRQQKRWATGLL-EI 279 (417)
Q Consensus 222 ~~~~~ltED~~~s~rl~~~Gwr~~y~~-p--------------------~~~~~~G~~P~tl~~~~~Qr~RWa~G~~-qi 279 (417)
|+.+|+|||+|+|+||+++|||+.|+. | ...+..++.|.|+++.++||.||-.|-. |.
T Consensus 261 ~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~ 340 (703)
T PRK15489 261 FNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQG 340 (703)
T ss_pred CCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhh
Confidence 888999999999999999999999931 1 1256788999999999999999999987 77
Q ss_pred HH
Q 014850 280 LF 281 (417)
Q Consensus 280 ~~ 281 (417)
..
T Consensus 341 ~~ 342 (703)
T PRK15489 341 WE 342 (703)
T ss_pred HH
Confidence 53
No 27
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.86 E-value=1.3e-19 Score=183.98 Aligned_cols=220 Identities=16% Similarity=0.193 Sum_probs=170.5
Q ss_pred CCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCcc
Q 014850 29 EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQY 108 (417)
Q Consensus 29 ~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~ 108 (417)
..-|+.|-+|.+|- +-||||+.+..+..+ +.++|++|+|||+++ .+|.+-+++..| +.+|+.|.+||--.
T Consensus 210 g~~~ifYRrRr~n~----~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvM-tgd~lvrLv~~M---E~~P~aGlIQt~P~ 279 (736)
T COG2943 210 GEGNIFYRRRRRNV----KRKAGNIADFCRRWG--SAYSYMLVLDADSVM-TGDCLVRLVRLM---EANPDAGLIQTSPK 279 (736)
T ss_pred CCCceeeehHhhhh----cccccCHHHHHHHhC--cccceEEEeeccccc-CchHHHHHHHHH---hhCCCCceeecchh
Confidence 46789998888884 689999999999875 889999999999987 899999999988 48999999998543
Q ss_pred cc--C----cccc-hHHHH-hHhhhhhhhcCCc--eecccCceeecccccccccchhhcccchhHHHHHHhhCCcHHHHH
Q 014850 109 FY--D----RPEN-LCILN-EYIGKGIVGIQGP--FYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIK 178 (417)
Q Consensus 109 f~--d----~~~~-~~~f~-~~~~~g~~~~~~~--~~~Gtg~~~Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 178 (417)
-- | +..+ .+..| .++..|...|++. .|.|.|+++|.+++.+-+
T Consensus 280 ~~gg~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~hc--------------------------- 332 (736)
T COG2943 280 ASGGDTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIEHC--------------------------- 332 (736)
T ss_pred hcCcchHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHHhc---------------------------
Confidence 22 1 1122 22223 3567889988875 589999999999974321
Q ss_pred HHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCCceeeccc
Q 014850 179 SAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCA 258 (417)
Q Consensus 179 s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~ 258 (417)
.+.-|.| ++.|..+.++.|.-.+..|.+.||.+.- .++-.-+++|.
T Consensus 333 -gLp~LpG--------------------------------~~pFgG~ilSHDfvEAALmRRaGW~v~i-a~dL~GSyEE~ 378 (736)
T COG2943 333 -GLPPLPG--------------------------------RGPFGGHILSHDFVEAALMRRAGWGVWI-AYDLDGSYEEL 378 (736)
T ss_pred -CCCCCCC--------------------------------CCCCCccccchHHHHHHHHhhcCceEEE-eccCCCchhhC
Confidence 0111223 2456677899999999999999997544 56666788999
Q ss_pred CCChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 014850 259 SPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYC 326 (417)
Q Consensus 259 P~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y~~~~~~~l~~~~~l~~~l~P~l~ 326 (417)
|+|+.+.++.-+|||+||+|-+ +++.. +++.+..|++++..++.|+++....+++++..+.
T Consensus 379 PpnLlD~l~RDRRWC~GNLqh~-----rl~~~--~GlHwvsR~h~~tGVmsYlsaPlWfl~ll~g~al 439 (736)
T COG2943 379 PPNLLDELKRDRRWCHGNLQHF-----RLFLV--KGLHWVSRAHFLTGVMSYLSAPLWFLFLLLGTAL 439 (736)
T ss_pred CchHHHHHhhhhHhhhcchhhc-----eeecc--CCccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999954 45553 8999999999999988888777666555554433
No 28
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.83 E-value=7.1e-19 Score=178.88 Aligned_cols=188 Identities=12% Similarity=0.112 Sum_probs=129.7
Q ss_pred CCccCCCceEE-EEEcCCCCC--------CCCCCc--EEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCC
Q 014850 7 TERMNHPTIVK-VISENKGGL--------SDEIPH--LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCD 75 (417)
Q Consensus 7 ~~~~~~p~~~~-v~~~~~~~~--------~~~~p~--l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD 75 (417)
+..+|||+..- |++|+++|. ..++|+ ++++..+++.| .++|++|+|++++ .+++|+++++|||
T Consensus 63 l~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G--~~~K~~~l~~~~~----~a~ge~i~~~DaD 136 (373)
T TIGR03472 63 FCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHG--PNRKVSNLINMLP----HARHDILVIADSD 136 (373)
T ss_pred HHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCC--CChHHHHHHHHHH----hccCCEEEEECCC
Confidence 35789998322 334555553 134564 77786665544 3579999999988 5899999999999
Q ss_pred CCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccC--cccc--hHHHHhH-hhhh---hhhcCC-ceecccCceeeccc
Q 014850 76 MYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYD--RPEN--LCILNEY-IGKG---IVGIQG-PFYQGTGTFHRRDV 146 (417)
Q Consensus 76 ~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d--~~~~--~~~f~~~-~~~g---~~~~~~-~~~~Gtg~~~Rr~a 146 (417)
.+ ++||+|++++..| .++++++|+++....+ .+.+ ...+... ..++ ....+. .++.|++.++||++
T Consensus 137 ~~-~~p~~L~~lv~~~----~~~~v~~V~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~RR~~ 211 (373)
T TIGR03472 137 IS-VGPDYLRQVVAPL----ADPDVGLVTCLYRGRPVPGFWSRLGAMGINHNFLPSVMVARALGRARFCFGATMALRRAT 211 (373)
T ss_pred CC-cChhHHHHHHHHh----cCCCcceEeccccCCCCCCHHHHHHHHHhhhhhhHHHHHHHhccCCccccChhhheeHHH
Confidence 97 5899999999998 5688999988644221 1111 1111100 1111 111222 34578888889988
Q ss_pred ccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccC--
Q 014850 147 VYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLY-- 224 (417)
Q Consensus 147 l~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~-- 224 (417)
++.+ |||+.
T Consensus 212 l~~i---------------------------------------------------------------------GGf~~~~ 222 (373)
T TIGR03472 212 LEAI---------------------------------------------------------------------GGLAALA 222 (373)
T ss_pred HHHc---------------------------------------------------------------------CChHHhc
Confidence 7532 46664
Q ss_pred cccchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhh
Q 014850 225 GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGL 276 (417)
Q Consensus 225 ~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~ 276 (417)
++++||.+++.++..+||++.|. |.. ......|+|++++++||.||++..
T Consensus 223 ~~~~ED~~l~~~i~~~G~~v~~~-~~~-v~~~~~~~s~~~~~~q~~RW~r~~ 272 (373)
T TIGR03472 223 HHLADDYWLGELVRALGLRVVLA-PVV-VDTDVHETSFATLLAHELRWSRTI 272 (373)
T ss_pred ccchHHHHHHHHHHHcCCeEEec-chh-hhcCCCccCHHHHHHHHHHHHhhh
Confidence 57899999999999999999995 543 445577899999999999998655
No 29
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.83 E-value=3.2e-20 Score=177.73 Aligned_cols=168 Identities=13% Similarity=0.047 Sum_probs=112.4
Q ss_pred HHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccc-hHHHHhH--------
Q 014850 52 AMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-LCILNEY-------- 122 (417)
Q Consensus 52 aLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~-~~~f~~~-------- 122 (417)
++|.++. .+++|||+++|||.+ ++|++|++++.+|. .+|++|.|++.+...++..+ ...+...
T Consensus 64 ~~~~~~~----~a~~e~i~~~DaD~~-~~~~~l~~l~~~~~---~~p~vg~v~g~~~~~~~~~~~~~~~q~~ey~~~~~~ 135 (244)
T cd04190 64 YFCRVLF----PDDPEFILLVDADTK-FDPDSIVQLYKAMD---KDPEIGGVCGEIHPMGKKQGPLVMYQVFEYAISHWL 135 (244)
T ss_pred HHHHHhh----cCCCCEEEEECCCCc-CCHhHHHHHHHHHH---hCCCEEEEEeeeEEcCCcchhHHHhHheehhhhhhh
Confidence 3455554 579999999999997 59999999999995 57899999998766543323 2222221
Q ss_pred hhhhhhhcCCce-ecccCceeecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHH
Q 014850 123 IGKGIVGIQGPF-YQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDE 201 (417)
Q Consensus 123 ~~~g~~~~~~~~-~~Gtg~~~Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~ 201 (417)
.....+..+... ..|+++++|++++.++.... .
T Consensus 136 ~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~-------------------~--------------------------- 169 (244)
T cd04190 136 DKAFESVFGFVTCLPGCFSMYRIEALKGDNGGK-------------------G--------------------------- 169 (244)
T ss_pred cccHHHcCCceEECCCceEEEEehhhcCCcccc-------------------c---------------------------
Confidence 112223334443 46889999999997642100 0
Q ss_pred HhhhhccccccCCCccccccccCcccchhHHHHHHHHhCCCeEEE--ecCCCceeecccCCChhHHHHHHHHHhhhhhH
Q 014850 202 AHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGY--CLPIPHAFLGCASPSGPAGMRQQKRWATGLLE 278 (417)
Q Consensus 202 ~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y--~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~q 278 (417)
..+.++|..++... ..+....+++||.+++++|..+||++.| + |+ +.+..++|+|++++++||.||++|++.
T Consensus 170 --~~~~~~~~~~~~~~-~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~-~~-a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 170 --PLLDYAYLTNTVDS-LHKKNNLDLGEDRILCTLLLKAGPKRKYLYV-PG-AVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred --cchhhccccCcccc-hHHHHHHhHhcccceeHHHhccCCccEEEEe-cc-cEEEEECCCCHHHHHHHhHhhhccccc
Confidence 00000000000000 1233345789999999999999999999 5 55 455779999999999999999999863
No 30
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.81 E-value=3.7e-19 Score=163.17 Aligned_cols=133 Identities=23% Similarity=0.327 Sum_probs=103.0
Q ss_pred EEEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccC---cccc-hHHHHhH----hhhhhhhcCCc-eeccc
Q 014850 68 FMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYD---RPEN-LCILNEY----IGKGIVGIQGP-FYQGT 138 (417)
Q Consensus 68 ~v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d---~~~~-~~~f~~~----~~~g~~~~~~~-~~~Gt 138 (417)
+|+++|||+. +.||+|+++++++ .+|++++||+|..+++ ...+ ....+.. .....+..+.+ .+.|+
T Consensus 1 ~v~~~DaDt~-~~~d~l~~~~~~~----~~~~~~~vq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 75 (193)
T PF13632_consen 1 YVLFLDADTR-LPPDFLERLVAAL----EDPKVDAVQGPIIFRNRGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGS 75 (193)
T ss_pred CEEEEcCCCC-CChHHHHHHHHHH----hCCCceEEEccEEecCCCChhheeehhhhhhhhhhhHHHHHhcCCCccccCc
Confidence 5899999997 5899999999998 4689999999999862 1222 2222221 11222233343 46899
Q ss_pred CceeecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccc
Q 014850 139 GTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGD 218 (417)
Q Consensus 139 g~~~Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~ 218 (417)
|.++|++++.++
T Consensus 76 ~~~~r~~~l~~v-------------------------------------------------------------------- 87 (193)
T PF13632_consen 76 GMLFRREALREV-------------------------------------------------------------------- 87 (193)
T ss_pred ceeeeHHHHHHh--------------------------------------------------------------------
Confidence 999999998432
Q ss_pred ccccc-CcccchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhh
Q 014850 219 EVGCL-YGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGL 276 (417)
Q Consensus 219 ~~G~~-~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~ 276 (417)
|||+ ..+++||+++++++.++||++.|+ |+. .+..++|+|+.++++||+||..|.
T Consensus 88 -g~~~~~~~~~ED~~l~~~l~~~G~~~~~~-~~~-~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 88 -GGFDDPFSIGEDMDLGFRLRRAGYRIVYV-PDA-IVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred -CcccccccccchHHHHHHHHHCCCEEEEe-ccc-ceeeeCCCCHHHHHHHHHHHHhhh
Confidence 4788 889999999999999999999996 553 446799999999999999999998
No 31
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.79 E-value=1.3e-18 Score=162.01 Aligned_cols=186 Identities=14% Similarity=0.201 Sum_probs=129.8
Q ss_pred CccCCCc---eEEEEEcCCCCC-----C----CCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCC
Q 014850 8 ERMNHPT---IVKVISENKGGL-----S----DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCD 75 (417)
Q Consensus 8 ~~~~~p~---~~~v~~~~~~~~-----~----~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD 75 (417)
..++||+ +|-|++|++++. . ...+++.++.++... ..+|+.|+|.+++ .+++|||+++|+|
T Consensus 20 ~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~~~---~~g~~~a~n~g~~----~~~~d~i~~~D~D 92 (229)
T cd04192 20 SALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSRVS---ISGKKNALTTAIK----AAKGDWIVTTDAD 92 (229)
T ss_pred HhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccCcc---cchhHHHHHHHHH----HhcCCEEEEECCC
Confidence 4678887 455666666553 1 235678888776421 3689999999998 5789999999999
Q ss_pred CCCCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc--Ccccc-hHHH----HhHhhhhhhhcCCc-eecccCceeecccc
Q 014850 76 MYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRPEN-LCIL----NEYIGKGIVGIQGP-FYQGTGTFHRRDVV 147 (417)
Q Consensus 76 ~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~--d~~~~-~~~f----~~~~~~g~~~~~~~-~~~Gtg~~~Rr~al 147 (417)
.+ +.|++|++++..|. ++..++|+.+..+. +.... ...+ ......+....+.+ .+.|++.++||+++
T Consensus 93 ~~-~~~~~l~~l~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~ 167 (229)
T cd04192 93 CV-VPSNWLLTFVAFIQ----KEQIGLVAGPVIYFKGKSLLAKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAF 167 (229)
T ss_pred cc-cCHHHHHHHHHHhh----cCCCcEEeeeeeecCCccHHHHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHH
Confidence 96 58999999999883 34566777776654 11111 1111 11111222223333 45788888999887
Q ss_pred cccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccC--c
Q 014850 148 YGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLY--G 225 (417)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~--~ 225 (417)
..+ |||++ .
T Consensus 168 ~~~---------------------------------------------------------------------ggf~~~~~ 178 (229)
T cd04192 168 FEV---------------------------------------------------------------------GGFEGNDH 178 (229)
T ss_pred HHh---------------------------------------------------------------------cCCccccc
Confidence 421 47764 4
Q ss_pred ccchhHHHHHHHHhCCC-eEEEe-cCCCceeecccCCChhHHHHHHHHHhhh
Q 014850 226 ATAEDNLTGLVIHSKGW-RSGYC-LPIPHAFLGCASPSGPAGMRQQKRWATG 275 (417)
Q Consensus 226 ~ltED~~~s~rl~~~Gw-r~~y~-~p~~~~~~G~~P~tl~~~~~Qr~RWa~G 275 (417)
..+||.++.+++.++|| ++.|+ +|. .......|.+++++++||.||++|
T Consensus 179 ~~~eD~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 179 IASGDDELLLAKVASKYPKVAYLKNPE-ALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred cccCCHHHHHHHHHhCCCCEEEeeCcc-hheecCCchhHHHHHHHHHHhhcC
Confidence 67899999999999999 98886 344 445678999999999999999998
No 32
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.79 E-value=6.5e-19 Score=162.42 Aligned_cols=159 Identities=16% Similarity=0.153 Sum_probs=120.1
Q ss_pred CccCCCceEE-EEEcCCCCC--------CCCCCc--EEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCC
Q 014850 8 ERMNHPTIVK-VISENKGGL--------SDEIPH--LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM 76 (417)
Q Consensus 8 ~~~~~p~~~~-v~~~~~~~~--------~~~~p~--l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~ 76 (417)
..++||+..- |++|++++. ...+|+ +.++..+++.| ..+|++|+|.|++ .+++||++++|+|.
T Consensus 24 ~~q~~~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~n~g~~----~a~~d~i~~~D~D~ 97 (196)
T cd02520 24 FQQDYPKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVG--INPKVNNLIKGYE----EARYDILVISDSDI 97 (196)
T ss_pred HhccCCCeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCC--CCHhHHHHHHHHH----hCCCCEEEEECCCc
Confidence 4567887333 445555554 124564 55666665533 3469999999999 57899999999999
Q ss_pred CCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccchHHHHhHhhhhhhhcCCceecccCceeecccccccccchhh
Q 014850 77 YANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIE 156 (417)
Q Consensus 77 ~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~~~~~~~ 156 (417)
. +.|++|.+++..+ .++++++|++. +..|+++++||+++..+
T Consensus 98 ~-~~~~~l~~l~~~~----~~~~~~~v~~~---------------------------~~~g~~~~~r~~~~~~~------ 139 (196)
T cd02520 98 S-VPPDYLRRMVAPL----MDPGVGLVTCL---------------------------CAFGKSMALRREVLDAI------ 139 (196)
T ss_pred e-EChhHHHHHHHHh----hCCCCCeEEee---------------------------cccCceeeeEHHHHHhc------
Confidence 7 5899999999998 45678888532 45788999999998532
Q ss_pred cccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccC--cccchhHHHH
Q 014850 157 HQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLY--GATAEDNLTG 234 (417)
Q Consensus 157 ~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~--~~ltED~~~s 234 (417)
|||+. ..++||.+++
T Consensus 140 ---------------------------------------------------------------ggf~~~~~~~~eD~~l~ 156 (196)
T cd02520 140 ---------------------------------------------------------------GGFEAFADYLAEDYFLG 156 (196)
T ss_pred ---------------------------------------------------------------cChHHHhHHHHHHHHHH
Confidence 35543 3568999999
Q ss_pred HHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhh
Q 014850 235 LVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATG 275 (417)
Q Consensus 235 ~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G 275 (417)
+++..+||++.|+ |+. .+..+.|.+++++++||.||++.
T Consensus 157 ~rl~~~G~~i~~~-~~~-~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 157 KLIWRLGYRVVLS-PYV-VMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred HHHHHcCCeEEEc-chh-eeccCCcccHHHHHHHHHHHhcc
Confidence 9999999999995 554 55679999999999999999874
No 33
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.78 E-value=2.2e-18 Score=161.88 Aligned_cols=190 Identities=14% Similarity=0.126 Sum_probs=130.1
Q ss_pred CceEEEEEcCCCCC-------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHH
Q 014850 13 PTIVKVISENKGGL-------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVL 85 (417)
Q Consensus 13 p~~~~v~~~~~~~~-------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~ 85 (417)
|-.+-|+.++++++ ....+.+.++. +++ ++|++|+|.|++ .+++|+|+++|+|.+ +.|++|+
T Consensus 28 ~~eiivvdd~s~d~~~~~l~~~~~~~~~~v~~-~~~-----~g~~~a~n~g~~----~a~~d~v~~lD~D~~-~~~~~l~ 96 (235)
T cd06434 28 PLEIIVVTDGDDEPYLSILSQTVKYGGIFVIT-VPH-----PGKRRALAEGIR----HVTTDIVVLLDSDTV-WPPNALP 96 (235)
T ss_pred CCEEEEEeCCCChHHHHHHHhhccCCcEEEEe-cCC-----CChHHHHHHHHH----HhCCCEEEEECCCce-eChhHHH
Confidence 77788888888875 11345666664 333 579999999999 479999999999997 5899999
Q ss_pred HHHHHhhCCCCCCcEEEEeCCccccCcccc-----hHHHHhH----hhhhhhhcCCce-ecccCceeecccccccccchh
Q 014850 86 QAMCLHLGSKNENEFAFIQSPQYFYDRPEN-----LCILNEY----IGKGIVGIQGPF-YQGTGTFHRRDVVYGLCLDQI 155 (417)
Q Consensus 86 ~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~-----~~~f~~~----~~~g~~~~~~~~-~~Gtg~~~Rr~al~~~~~~~~ 155 (417)
+++..| .+++++.|++.+..++...+ ...++.. ........+... +.|...++||+++.....+.
T Consensus 97 ~l~~~~----~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~~- 171 (235)
T cd06434 97 EMLKPF----EDPKVGGVGTNQRILRPRDSKWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFLE- 171 (235)
T ss_pred HHHHhc----cCCCEeEEcCceEeecCcccHHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhHH-
Confidence 999998 47899999988776632111 1111111 111222223332 35667788988875431100
Q ss_pred hcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccchhHHHHH
Q 014850 156 EHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGL 235 (417)
Q Consensus 156 ~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~ 235 (417)
.|. .+ .++.......||.+++.
T Consensus 172 -------------------~~~-------------------------~~--------------~~~~~~~~~~eD~~l~~ 193 (235)
T cd06434 172 -------------------EFT-------------------------NE--------------TFMGRRLNAGDDRFLTR 193 (235)
T ss_pred -------------------Hhh-------------------------hh--------------hhcCCCCCcCchHHHHH
Confidence 000 00 01222347889999999
Q ss_pred HHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhH
Q 014850 236 VIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLE 278 (417)
Q Consensus 236 rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~q 278 (417)
++..+||+++|+ |...+ ..+.|+++.++++||.||++|+.+
T Consensus 194 ~~~~~g~~~~~~-~~~~~-~~~~~~~~~~~~~q~~Rw~~~~~~ 234 (235)
T cd06434 194 YVLSHGYKTVYQ-YTSEA-YTETPENYKKFLKQQLRWSRSNWR 234 (235)
T ss_pred HHHHCCCeEEEe-cCCeE-EEEcchhHHHHHHHhhhhhhcccC
Confidence 999999999996 55444 558999999999999999999853
No 34
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.71 E-value=1.6e-16 Score=151.03 Aligned_cols=182 Identities=15% Similarity=0.180 Sum_probs=124.8
Q ss_pred ccCCCc---eEEEEEcCCCCC----CCCCC--cEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCC
Q 014850 9 RMNHPT---IVKVISENKGGL----SDEIP--HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYAN 79 (417)
Q Consensus 9 ~~~~p~---~~~v~~~~~~~~----~~~~p--~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p 79 (417)
.+++|. .+-|++|+++|. ..++. ++.++..+++ .+|++|+|.+++ .+++|+|+++|+|.++
T Consensus 53 ~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~v~~i~~~~~-----~g~~~a~n~gi~----~a~~d~i~~lD~D~~~- 122 (251)
T cd06439 53 ALDYPRDRLEIIVVSDGSTDGTAEIAREYADKGVKLLRFPER-----RGKAAALNRALA----LATGEIVVFTDANALL- 122 (251)
T ss_pred hCcCCCCcEEEEEEECCCCccHHHHHHHHhhCcEEEEEcCCC-----CChHHHHHHHHH----HcCCCEEEEEccccCc-
Confidence 456766 566667777764 11121 5788877666 469999999999 4788999999999974
Q ss_pred chHHHHHHHHHhhCCCCCCcEEEEeCCccccCcc--cc-hH---HHHhHhhhhhhhcCCc-eecccCceeeccccccccc
Q 014850 80 NPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRP--EN-LC---ILNEYIGKGIVGIQGP-FYQGTGTFHRRDVVYGLCL 152 (417)
Q Consensus 80 ~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~--~~-~~---~f~~~~~~g~~~~~~~-~~~Gtg~~~Rr~al~~~~~ 152 (417)
.|++|.+++..+ .++++++|++.....++- .. .. .+...........+.. ...|++.++||+++.
T Consensus 123 ~~~~l~~l~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---- 194 (251)
T cd06439 123 DPDALRLLVRHF----ADPSVGAVSGELVIVDGGGSGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFR---- 194 (251)
T ss_pred CHHHHHHHHHHh----cCCCccEEEeEEEecCCcccchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhc----
Confidence 799999999998 457788888766654321 11 11 1111111111111111 123333345555542
Q ss_pred chhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCcccchhHH
Q 014850 153 DQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNL 232 (417)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~ 232 (417)
||......||.+
T Consensus 195 --------------------------------------------------------------------~~~~~~~~eD~~ 206 (251)
T cd06439 195 --------------------------------------------------------------------PLPADTINDDFV 206 (251)
T ss_pred --------------------------------------------------------------------CCCcccchhHHH
Confidence 344556789999
Q ss_pred HHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhH
Q 014850 233 TGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLE 278 (417)
Q Consensus 233 ~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~q 278 (417)
++.++..+||++.|+ |.. ......|.+..++++|+.||++|++|
T Consensus 207 l~~~~~~~G~~~~~~-~~~-~~~~~~~~~~~~~~~~~~r~~~g~~~ 250 (251)
T cd06439 207 LPLRIARQGYRVVYE-PDA-VAYEEVAEDGSEEFRRRVRIAAGNLQ 250 (251)
T ss_pred HHHHHHHcCCeEEec-ccc-EEEEeCcccHHHHHHHHHHHHhcccc
Confidence 999999999999995 554 45779999999999999999999987
No 35
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.63 E-value=9.4e-14 Score=141.94 Aligned_cols=191 Identities=14% Similarity=0.033 Sum_probs=121.5
Q ss_pred CccCCCc--eEEEEEcCCCCC--------CCCCC---cEEEEEcCCCCCCCCCCchHHHHHHHHhcCCC-CCCCEEEEec
Q 014850 8 ERMNHPT--IVKVISENKGGL--------SDEIP---HLVYISREKRPKHPHHYKAGAMNVLTRVSGLM-TNAPFMLNVD 73 (417)
Q Consensus 8 ~~~~~p~--~~~v~~~~~~~~--------~~~~p---~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~-~~~e~v~vlD 73 (417)
..++||. +|-|++|+|+|. ..++| ++++++.++++. ...+|+.|+|.+++.+... .++|+++.+|
T Consensus 63 ~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~-g~~Gk~~A~n~g~~~A~~~~~~gd~llflD 141 (384)
T TIGR03469 63 LEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPP-GWSGKLWAVSQGIAAARTLAPPADYLLLTD 141 (384)
T ss_pred HhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCC-CCcchHHHHHHHHHHHhccCCCCCEEEEEC
Confidence 4578884 566777777775 12344 788887554321 1368999999999852111 1199999999
Q ss_pred CCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccC--cccc-h-H---HHHhHhh---hhhhhc-CCceecccCcee
Q 014850 74 CDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYD--RPEN-L-C---ILNEYIG---KGIVGI-QGPFYQGTGTFH 142 (417)
Q Consensus 74 aD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d--~~~~-~-~---~f~~~~~---~g~~~~-~~~~~~Gtg~~~ 142 (417)
||.. ++|++|++++..+.+ +++++|....++.+ .... . . .++.... ...+.. ......|.+.++
T Consensus 142 aD~~-~~p~~l~~lv~~~~~----~~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~li 216 (384)
T TIGR03469 142 ADIA-HGPDNLARLVARARA----EGLDLVSLMVRLRCESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILI 216 (384)
T ss_pred CCCC-CChhHHHHHHHHHHh----CCCCEEEecccccCCCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEE
Confidence 9997 589999999999853 34555543333221 1111 0 0 0111000 001111 112246778888
Q ss_pred ecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccc
Q 014850 143 RRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGC 222 (417)
Q Consensus 143 Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~ 222 (417)
||++++.+ |||
T Consensus 217 rr~~~~~v---------------------------------------------------------------------GGf 227 (384)
T TIGR03469 217 RREALERI---------------------------------------------------------------------GGI 227 (384)
T ss_pred EHHHHHHc---------------------------------------------------------------------CCH
Confidence 99887532 466
Q ss_pred cC--cccchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhh
Q 014850 223 LY--GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWAT 274 (417)
Q Consensus 223 ~~--~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~ 274 (417)
++ ..+.||.+++.++.++|+++.+.... .......-++++++++|+.||+.
T Consensus 228 ~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~-~~~s~r~~~~~~~~~~~~~r~~~ 280 (384)
T TIGR03469 228 AAIRGALIDDCTLAAAVKRSGGRIWLGLAA-RTRSLRPYDGLGEIWRMIARTAY 280 (384)
T ss_pred HHHhhCcccHHHHHHHHHHcCCcEEEEecC-ceEEEEecCCHHHHHHHHHHhHH
Confidence 54 46799999999999999999996543 33333556799999999999844
No 36
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.63 E-value=4.9e-15 Score=139.51 Aligned_cols=188 Identities=15% Similarity=0.123 Sum_probs=120.3
Q ss_pred ccCCC---ceEEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCC
Q 014850 9 RMNHP---TIVKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY 77 (417)
Q Consensus 9 ~~~~p---~~~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~ 77 (417)
++++| -.+-|+++.++++ ..+.|+++++..++ +++++|+|.|++ .+++|+++++|+|.+
T Consensus 24 ~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~------~~~~~a~N~g~~----~a~~d~v~~lD~D~~ 93 (249)
T cd02525 24 NQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDNPK------RIQSAGLNIGIR----NSRGDIIIRVDAHAV 93 (249)
T ss_pred hccCCCCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeCCC------CCchHHHHHHHH----HhCCCEEEEECCCcc
Confidence 45664 2344555555553 23467888887543 358999999999 478999999999997
Q ss_pred CCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc--Ccccc-hHHHHh-Hhhhhh---hhcC---CceecccCceeecccc
Q 014850 78 ANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRPEN-LCILNE-YIGKGI---VGIQ---GPFYQGTGTFHRRDVV 147 (417)
Q Consensus 78 ~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~--d~~~~-~~~f~~-~~~~g~---~~~~---~~~~~Gtg~~~Rr~al 147 (417)
++|++|.+++..+. ++++..|+++.... +.... ....+. ....+. .... .....|.+.++||+++
T Consensus 94 -~~~~~l~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (249)
T cd02525 94 -YPKDYILELVEALK----RTGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVF 168 (249)
T ss_pred -CCHHHHHHHHHHHh----cCCCCEEecceecCCCChHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHH
Confidence 59999999998874 34455555443221 11110 000000 000000 0000 1123455555566554
Q ss_pred cccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCccccccccCc-c
Q 014850 148 YGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYG-A 226 (417)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~~-~ 226 (417)
.. + |||++. .
T Consensus 169 ~~-------------------------------------------------------~--------------g~~~~~~~ 179 (249)
T cd02525 169 EK-------------------------------------------------------V--------------GGFDESLV 179 (249)
T ss_pred HH-------------------------------------------------------h--------------CCCCcccC
Confidence 21 1 244443 3
Q ss_pred cchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHHHh
Q 014850 227 TAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFS 282 (417)
Q Consensus 227 ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~~~ 282 (417)
..||.++++++.++|+++.|+ |+..+ ....|.+++.+++|+.||.+|..|.+.+
T Consensus 180 ~~eD~~l~~r~~~~G~~~~~~-~~~~~-~~~~~~s~~~~~~~~~r~~~~~~~~~~~ 233 (249)
T cd02525 180 RNEDAELNYRLRKAGYKIWLS-PDIRV-YYYPRSTLKKLARQYFRYGKWRARTLRK 233 (249)
T ss_pred ccchhHHHHHHHHcCcEEEEc-CCeEE-EEcCCCCHHHHHHHHHHHhhhhHHHHHh
Confidence 479999999999999999995 65444 5578899999999999999999999864
No 37
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.62 E-value=4.3e-15 Score=136.00 Aligned_cols=158 Identities=15% Similarity=0.155 Sum_probs=113.2
Q ss_pred EEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCcccc--Cc
Q 014850 35 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DR 112 (417)
Q Consensus 35 y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~--d~ 112 (417)
++.-+.+.+ .+.|..||..+++. ..++|++++.|+|..+ +|++|++++..| .+|++|+|.++.+.. +.
T Consensus 6 lvv~~~~~g--~N~Kv~nL~~~~~~---~a~~d~~~~~DsDi~v-~p~~L~~lv~~l----~~p~vglVt~~~~~~~~~~ 75 (175)
T PF13506_consen 6 LVVGGPPRG--CNPKVNNLAQGLEA---GAKYDYLVISDSDIRV-PPDYLRELVAPL----ADPGVGLVTGLPRGVPARG 75 (175)
T ss_pred EEECCCCCC--CChHHHHHHHHHHh---hCCCCEEEEECCCeeE-CHHHHHHHHHHH----hCCCCcEEEecccccCCcC
Confidence 444444443 46899999999983 2899999999999985 899999999999 567899997765554 22
Q ss_pred ccc--hHHHHhHhhhhh-h-hcCCceecccCceeecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCC
Q 014850 113 PEN--LCILNEYIGKGI-V-GIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKT 188 (417)
Q Consensus 113 ~~~--~~~f~~~~~~g~-~-~~~~~~~~Gtg~~~Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~ 188 (417)
+.. ...++.. ..+. . .-+..+++|..+++||++|+.+
T Consensus 76 ~~~~l~~~~~~~-~~~~~~a~~~~~~~~G~~m~~rr~~L~~~-------------------------------------- 116 (175)
T PF13506_consen 76 FWSRLEAAFFNF-LPGVLQALGGAPFAWGGSMAFRREALEEI-------------------------------------- 116 (175)
T ss_pred HHHHHHHHHHhH-HHHHHHHhcCCCceecceeeeEHHHHHHc--------------------------------------
Confidence 222 2222211 1111 1 1245678999999999998532
Q ss_pred CCCCCcccchHHHHhhhhccccccCCCccccccccC--cccchhHHHHHHHHhCCCeEEEecCCCceeecccC----CCh
Q 014850 189 GGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLY--GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCAS----PSG 262 (417)
Q Consensus 189 ~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~~--~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P----~tl 262 (417)
|||.. +.++||..++-+++.+|||++.. |.. +.....| .++
T Consensus 117 -------------------------------GG~~~l~~~ladD~~l~~~~~~~G~~v~~~-~~~-v~~~~~~~~~~~s~ 163 (175)
T PF13506_consen 117 -------------------------------GGFEALADYLADDYALGRRLRARGYRVVLS-PYP-VVQTSVPRTLEDSF 163 (175)
T ss_pred -------------------------------ccHHHHhhhhhHHHHHHHHHHHCCCeEEEc-chh-eeecccCccccccH
Confidence 23333 58899999999999999999994 432 3334566 489
Q ss_pred hHHHHHHHHHhh
Q 014850 263 PAGMRQQKRWAT 274 (417)
Q Consensus 263 ~~~~~Qr~RWa~ 274 (417)
+++++++.||++
T Consensus 164 ~~~~~r~~RW~r 175 (175)
T PF13506_consen 164 RDFFRRQLRWAR 175 (175)
T ss_pred HHHHHHHHhhcC
Confidence 999999999985
No 38
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.53 E-value=9.4e-14 Score=127.82 Aligned_cols=133 Identities=17% Similarity=0.096 Sum_probs=95.0
Q ss_pred cCCCceEEEEEcCCCCC-----C--CCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCC-------CCCCCEEEEecCC
Q 014850 10 MNHPTIVKVISENKGGL-----S--DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGL-------MTNAPFMLNVDCD 75 (417)
Q Consensus 10 ~~~p~~~~v~~~~~~~~-----~--~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~-------~~~~e~v~vlDaD 75 (417)
++.+-.|-|++|+++|. . ...++++++.+..... ..+|++|+|.|++.+.. ..++|+|+++|||
T Consensus 22 ~~~~~eIivvdd~S~D~t~~~~~~~~~~~~v~~i~~~~~~~--~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD 99 (191)
T cd06436 22 NKPNFLVLVIDDASDDDTAGIVRLAITDSRVHLLRRHLPNA--RTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDAD 99 (191)
T ss_pred CCCCeEEEEEECCCCcCHHHHHhheecCCcEEEEeccCCcC--CCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCC
Confidence 34234677788888775 2 1357899998753211 35799999999986311 1135899999999
Q ss_pred CCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccc-hHH--------HHhHhhhhhhhcCCceecccCceeeccc
Q 014850 76 MYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-LCI--------LNEYIGKGIVGIQGPFYQGTGTFHRRDV 146 (417)
Q Consensus 76 ~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~-~~~--------f~~~~~~g~~~~~~~~~~Gtg~~~Rr~a 146 (417)
.+ ++|++|++++.+| .+|++++||++.+++|...+ ... ++..++.++...+...+.|+|+++||++
T Consensus 100 ~~-~~~~~l~~~~~~~----~~~~v~~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~ 174 (191)
T cd06436 100 GR-LDPNALEAVAPYF----SDPRVAGTQSRVRMYNRHKNLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSA 174 (191)
T ss_pred CC-cCHhHHHHHHHhh----cCCceEEEeeeEEEecCCCCHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHH
Confidence 97 5899999988887 57899999999887754433 222 2234566776666656789999999999
Q ss_pred ccc
Q 014850 147 VYG 149 (417)
Q Consensus 147 l~~ 149 (417)
|..
T Consensus 175 l~~ 177 (191)
T cd06436 175 LDG 177 (191)
T ss_pred HHH
Confidence 853
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.30 E-value=1.7e-11 Score=112.19 Aligned_cols=88 Identities=14% Similarity=0.121 Sum_probs=65.9
Q ss_pred ccCCCc-eEEEEEcCCCCC---------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCC
Q 014850 9 RMNHPT-IVKVISENKGGL---------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 78 (417)
Q Consensus 9 ~~~~p~-~~~v~~~~~~~~---------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~ 78 (417)
.+++|. .+-|+++.+++. ....+++.++..+.+ .+++.|+|.|++ .+++||++++|+|.+
T Consensus 26 ~q~~~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~a~n~g~~----~a~~d~i~~ld~D~~- 95 (202)
T cd04184 26 AQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREEN-----GGISAATNSALE----LATGEFVALLDHDDE- 95 (202)
T ss_pred hCcCCCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccC-----CCHHHHHHHHHH----hhcCCEEEEECCCCc-
Confidence 456766 555666666553 123567888877655 579999999999 478999999999996
Q ss_pred CchHHHHHHHHHhhCCCCCCcEEEEeCCccc
Q 014850 79 NNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 109 (417)
Q Consensus 79 p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f 109 (417)
++|++|.+++..+. .++++++|.+....
T Consensus 96 ~~~~~l~~~~~~~~---~~~~~~~v~~~~~~ 123 (202)
T cd04184 96 LAPHALYEVVKALN---EHPDADLIYSDEDK 123 (202)
T ss_pred CChHHHHHHHHHHH---hCCCCCEEEccHHh
Confidence 59999999999883 45678888665543
No 40
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.26 E-value=1.8e-11 Score=111.46 Aligned_cols=131 Identities=14% Similarity=0.091 Sum_probs=81.1
Q ss_pred CccCCC---ceEEEEEcCCCCC----CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcC-CCCCCCEEEEecCCCCCC
Q 014850 8 ERMNHP---TIVKVISENKGGL----SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSG-LMTNAPFMLNVDCDMYAN 79 (417)
Q Consensus 8 ~~~~~p---~~~~v~~~~~~~~----~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~-~~~~~e~v~vlDaD~~~p 79 (417)
.++++| -.|-|+.|+++|. ..+... .++.+.+++ ..+|++|+|.+++... ..+++|+++++|||++ +
T Consensus 20 ~~~~~p~~~~eiivvdd~s~D~t~~~~~~~~~-~~~~~~~~~---~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~-~ 94 (183)
T cd06438 20 KAQDYPRELYRIFVVADNCTDDTAQVARAAGA-TVLERHDPE---RRGKGYALDFGFRHLLNLADDPDAVVVFDADNL-V 94 (183)
T ss_pred HhcCCCCcccEEEEEeCCCCchHHHHHHHcCC-eEEEeCCCC---CCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCC-C
Confidence 345665 2455667777764 112222 233333322 3689999999998631 1247999999999997 5
Q ss_pred chHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccc---------hHHHHhHhhhhhhhcCCc-eecccCceeeccccc
Q 014850 80 NPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN---------LCILNEYIGKGIVGIQGP-FYQGTGTFHRRDVVY 148 (417)
Q Consensus 80 ~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~---------~~~f~~~~~~g~~~~~~~-~~~Gtg~~~Rr~al~ 148 (417)
.|++|.+++..|. .++ .+||+.....++-.+ ...++.....++..+++. .+.|+|+++||++++
T Consensus 95 ~p~~l~~l~~~~~---~~~--~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~ 168 (183)
T cd06438 95 DPNALEELNARFA---AGA--RVVQAYYNSKNPDDSWITRLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVLR 168 (183)
T ss_pred ChhHHHHHHHHHh---hCC--CeeEEEEeeeCCccCHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHHH
Confidence 8999999999984 222 457765544322112 112223344456666655 458999999999873
No 41
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.23 E-value=6.9e-11 Score=108.22 Aligned_cols=88 Identities=14% Similarity=0.168 Sum_probs=65.5
Q ss_pred ccCCC-ceEEEEEcCC-CCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCC
Q 014850 9 RMNHP-TIVKVISENK-GGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 78 (417)
Q Consensus 9 ~~~~p-~~~~v~~~~~-~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~ 78 (417)
.+++| -.+-|++|++ ++. ..+.| +.++..++| .++++|+|.|++ .+++|||+++|+|.+
T Consensus 24 ~q~~~~~eiiivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n-----~G~~~a~N~g~~----~a~gd~i~~lD~Dd~- 92 (201)
T cd04195 24 KQTLPPDEVVLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKN-----RGLGKALNEGLK----HCTYDWVARMDTDDI- 92 (201)
T ss_pred hcCCCCcEEEEEECCCCchhHHHHHHHHHhcCC-eEEEEcCcc-----ccHHHHHHHHHH----hcCCCEEEEeCCccc-
Confidence 35555 4444555655 332 12344 889988877 479999999999 579999999999997
Q ss_pred CchHHHHHHHHHhhCCCCCCcEEEEeCCcccc
Q 014850 79 NNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY 110 (417)
Q Consensus 79 p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~ 110 (417)
+.|++|.+++..|. .++++++|.+....+
T Consensus 93 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~ 121 (201)
T cd04195 93 SLPDRFEKQLDFIE---KNPEIDIVGGGVLEF 121 (201)
T ss_pred cCcHHHHHHHHHHH---hCCCeEEEcccEEEE
Confidence 58999999999985 567888887765543
No 42
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.15 E-value=1.8e-10 Score=108.28 Aligned_cols=84 Identities=18% Similarity=0.220 Sum_probs=58.8
Q ss_pred ceEEEEEcCCCCC----CC-CCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHH
Q 014850 14 TIVKVISENKGGL----SD-EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAM 88 (417)
Q Consensus 14 ~~~~v~~~~~~~~----~~-~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v 88 (417)
-++-|+++++++. .. ..+++.++..++|. ++++|+|.|++.+. ..++|||+.+|+|.. ++|++|.+++
T Consensus 25 ~~iivvDn~s~~~~~~~~~~~~~~i~~i~~~~n~-----G~~~a~N~g~~~a~-~~~~d~v~~lD~D~~-~~~~~l~~l~ 97 (237)
T cd02526 25 DKVVVVDNSSGNDIELRLRLNSEKIELIHLGENL-----GIAKALNIGIKAAL-ENGADYVLLFDQDSV-PPPDMVEKLL 97 (237)
T ss_pred CEEEEEeCCCCccHHHHhhccCCcEEEEECCCce-----ehHHhhhHHHHHHH-hCCCCEEEEECCCCC-cCHhHHHHHH
Confidence 3566666666554 11 25789999988773 59999999999521 115699999999997 5899999985
Q ss_pred ---HHhhCCCCCCcEEEEeCCcc
Q 014850 89 ---CLHLGSKNENEFAFIQSPQY 108 (417)
Q Consensus 89 ---~~f~d~~~~~~vg~VQ~pq~ 108 (417)
..+ ..++.++++. |+.
T Consensus 98 ~~~~~~---~~~~~~~~~~-~~~ 116 (237)
T cd02526 98 AYKILS---DKNSNIGAVG-PRI 116 (237)
T ss_pred HHHHhh---ccCCCeEEEe-eeE
Confidence 222 2456777664 443
No 43
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.10 E-value=1.4e-09 Score=106.88 Aligned_cols=68 Identities=10% Similarity=0.046 Sum_probs=57.0
Q ss_pred eEEEEEcCCCCC----------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHH
Q 014850 15 IVKVISENKGGL----------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIV 84 (417)
Q Consensus 15 ~~~v~~~~~~~~----------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L 84 (417)
+|-|++|.|++. ....|++++++.++| .+++.|.|.|++ .+.||||+.+|+|.++ .|++|
T Consensus 32 EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n-----~G~~~a~N~g~~----~A~gd~i~fLD~D~~~-~~~wL 101 (299)
T cd02510 32 EIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKR-----EGLIRARIAGAR----AATGDVLVFLDSHCEV-NVGWL 101 (299)
T ss_pred EEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCC-----CCHHHHHHHHHH----HccCCEEEEEeCCccc-CccHH
Confidence 677777777765 124678999988876 579999999999 5899999999999975 89999
Q ss_pred HHHHHHhh
Q 014850 85 LQAMCLHL 92 (417)
Q Consensus 85 ~~~v~~f~ 92 (417)
.+++..+.
T Consensus 102 ~~ll~~l~ 109 (299)
T cd02510 102 EPLLARIA 109 (299)
T ss_pred HHHHHHHH
Confidence 99999985
No 44
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.09 E-value=5.3e-09 Score=110.10 Aligned_cols=164 Identities=14% Similarity=0.218 Sum_probs=101.9
Q ss_pred CCCCEEEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccc-hHHHH-------hHhhhhhhhc-CCce
Q 014850 64 TNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-LCILN-------EYIGKGIVGI-QGPF 134 (417)
Q Consensus 64 ~~~e~v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~-~~~f~-------~~~~~g~~~~-~~~~ 134 (417)
...||++.+|||+.+ +|+.+.+++.-|. +||+++.|...-+-.+...+ -+.++ ....++.... +...
T Consensus 200 ~~~~~il~~DaDt~~-~p~~~~~lv~~m~---~d~~i~gvCG~t~i~n~~~s~~t~~Q~fEY~ish~l~Ka~Es~fG~Vt 275 (527)
T PF03142_consen 200 DFYEYILMVDADTKF-DPDSVNRLVDAME---RDPKIGGVCGETRIDNKGQSWWTMYQVFEYAISHHLQKAFESVFGSVT 275 (527)
T ss_pred cceEEEEEecCCceE-cHHHHHHHHHHHc---CCCCeEEEeceeEEcCCCCCHhhheeccchhHHHHHHHHHHHHhCcee
Confidence 347999999999975 9999999998885 78999999774332221111 11111 1123333333 3333
Q ss_pred e-cccCceeecccccccc---cchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhcccc
Q 014850 135 Y-QGTGTFHRRDVVYGLC---LDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGY 210 (417)
Q Consensus 135 ~-~Gtg~~~Rr~al~~~~---~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y 210 (417)
| -|.-+++|-+|+.... .+.+ ...++...|... ..+.+++.
T Consensus 276 CLPGcfsmyR~~a~~~~~~~~~p~l------~~~~i~~~Y~~~------------------------~~dtlh~~----- 320 (527)
T PF03142_consen 276 CLPGCFSMYRISALMDGDGYWVPLL------ISPDIIEKYSEN------------------------PVDTLHQK----- 320 (527)
T ss_pred ecCCcceeeeeehhccccccccccc------cchHHHHHHhhc------------------------cchHHHHH-----
Confidence 4 7888899999986511 0000 001111112100 00111111
Q ss_pred ccCCCccccccccCcccchhHHHHHHHHhC--CCeEEEecCCCceeecccCCChhHHHHHHHHHhhhhhHHH
Q 014850 211 EYGSSWGDEVGCLYGATAEDNLTGLVIHSK--GWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEIL 280 (417)
Q Consensus 211 ~~~~~w~~~~G~~~~~ltED~~~s~rl~~~--Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G~~qi~ 280 (417)
.-..+.||-.++-.|..+ |||..|+ |...+ ...+|+|++.+++||+||..|++--+
T Consensus 321 ------------nl~~lGEDR~LttLlLk~~~~~k~~y~-~~A~a-~T~aP~t~~vflsQRRRWinSTi~Nl 378 (527)
T PF03142_consen 321 ------------NLLDLGEDRWLTTLLLKQFPGYKTEYV-PSAVA-YTDAPETFSVFLSQRRRWINSTIHNL 378 (527)
T ss_pred ------------hhhhcchhHHHHHHHHhhCCCceEEEc-ccccc-cccCCccHHHHHHHhhhccchhHhhH
Confidence 012578999999888887 8999996 55455 55999999999999999999998544
No 45
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.08 E-value=6.5e-10 Score=100.55 Aligned_cols=128 Identities=15% Similarity=0.057 Sum_probs=73.8
Q ss_pred CccCCCce-EEEEEcCCCCC----CCCC-CcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCch
Q 014850 8 ERMNHPTI-VKVISENKGGL----SDEI-PHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNP 81 (417)
Q Consensus 8 ~~~~~p~~-~~v~~~~~~~~----~~~~-p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p 81 (417)
..+++|+. |-|+++.+++. ..++ .++.++..+++ .++++|+|.|++ .+++|||+++|+|.++ .|
T Consensus 21 ~~q~~~~~evivvDd~s~d~~~~~~~~~~~~~~~~~~~~~-----~g~~~a~n~~~~----~a~~~~v~~ld~D~~~-~~ 90 (202)
T cd06433 21 LSQTYPNIEYIVIDGGSTDGTVDIIKKYEDKITYWISEPD-----KGIYDAMNKGIA----LATGDIIGFLNSDDTL-LP 90 (202)
T ss_pred HhCCCCCceEEEEeCCCCccHHHHHHHhHhhcEEEEecCC-----cCHHHHHHHHHH----HcCCCEEEEeCCCccc-Cc
Confidence 34667753 44444455543 1111 22345555555 479999999999 5789999999999975 88
Q ss_pred HHHHHHHHHhhCCCCCCcEEEEeCCccccCcccc-hHHHHhHhhhhhhhcCCceecccCceeeccccc
Q 014850 82 EIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVY 148 (417)
Q Consensus 82 ~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~-~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~ 148 (417)
+.+.+++..+. .+++.++|.+...+.+.-.. .....................+++.++||+++.
T Consensus 91 ~~~~~~~~~~~---~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (202)
T cd06433 91 GALLAVVAAFA---EHPEVDVVYGDVLLVDENGRVIGRRRPPPFLDKFLLYGMPICHQATFFRRSLFE 155 (202)
T ss_pred hHHHHHHHHHH---hCCCccEEEeeeEEEcCCCCcccCCCCcchhhhHHhhcCcccCcceEEEHHHHH
Confidence 99999985554 45677777665544321111 100000001111122233446667777877764
No 46
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.05 E-value=1.6e-09 Score=95.00 Aligned_cols=95 Identities=15% Similarity=0.147 Sum_probs=71.4
Q ss_pred CceEEEEEcCCCCC-----CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHH
Q 014850 13 PTIVKVISENKGGL-----SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQA 87 (417)
Q Consensus 13 p~~~~v~~~~~~~~-----~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~ 87 (417)
+-.+-|+++++++. ....+++.++..+++ .+|++|+|.+++ .+++|+++++|+|.+ +.|+++.++
T Consensus 26 ~~~iiivdd~s~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~a~n~~~~----~~~~~~i~~~D~D~~-~~~~~l~~~ 95 (166)
T cd04186 26 DFEVIVVDNASTDGSVELLRELFPEVRLIRNGEN-----LGFGAGNNQGIR----EAKGDYVLLLNPDTV-VEPGALLEL 95 (166)
T ss_pred CeEEEEEECCCCchHHHHHHHhCCCeEEEecCCC-----cChHHHhhHHHh----hCCCCEEEEECCCcE-ECccHHHHH
Confidence 44566666666654 123446788877665 479999999999 469999999999997 589999999
Q ss_pred HHHhhCCCCCCcEEEEeCCccccCcccchHHHHhHhhhhhhhcCCceecccCceeeccccc
Q 014850 88 MCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVY 148 (417)
Q Consensus 88 v~~f~d~~~~~~vg~VQ~pq~f~d~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~ 148 (417)
+..+. .+++++++.+. +.|++.++||+++.
T Consensus 96 ~~~~~---~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~ 125 (166)
T cd04186 96 LDAAE---QDPDVGIVGPK----------------------------VSGAFLLVRREVFE 125 (166)
T ss_pred HHHHH---hCCCceEEEcc----------------------------CceeeEeeeHHHHH
Confidence 98775 56778877421 57778888888874
No 47
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.03 E-value=3.6e-09 Score=103.01 Aligned_cols=80 Identities=15% Similarity=-0.006 Sum_probs=60.4
Q ss_pred eEEEEEcCCCCC------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHH
Q 014850 15 IVKVISENKGGL------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAM 88 (417)
Q Consensus 15 ~~~v~~~~~~~~------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v 88 (417)
.|-|+++.|++. ....|+++|++.++| .+.|+|+|.|++... ..++|||+.+|.|.+ |+|++|.+++
T Consensus 23 ~iiVVDN~S~~~~~~~~~~~~~~~i~~i~~~~N-----~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~-~~~~~l~~l~ 95 (281)
T TIGR01556 23 RIIAVDNSPHSDQPLKNARLRGQKIALIHLGDN-----QGIAGAQNQGLDASF-RRGVQGVLLLDQDSR-PGNAFLAAQW 95 (281)
T ss_pred EEEEEECcCCCcHhHHHHhccCCCeEEEECCCC-----cchHHHHHHHHHHHH-HCCCCEEEEECCCCC-CCHHHHHHHH
Confidence 455666665432 235689999998877 469999999998532 237899999999996 5899999999
Q ss_pred HHhhCCCCCC-cEEEEe
Q 014850 89 CLHLGSKNEN-EFAFIQ 104 (417)
Q Consensus 89 ~~f~d~~~~~-~vg~VQ 104 (417)
..+. .++ ++++|.
T Consensus 96 ~~~~---~~~~~~~~~~ 109 (281)
T TIGR01556 96 KLLS---AENGQACALG 109 (281)
T ss_pred HHHH---hcCCceEEEC
Confidence 8874 233 788875
No 48
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.99 E-value=9.6e-09 Score=95.26 Aligned_cols=68 Identities=16% Similarity=0.120 Sum_probs=48.3
Q ss_pred CceEEEEEcCCCCCC---CCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHH
Q 014850 13 PTIVKVISENKGGLS---DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMC 89 (417)
Q Consensus 13 p~~~~v~~~~~~~~~---~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v~ 89 (417)
+-.|-|++++++++. -+.++++++.. + .+|++|+|.|++ .+++|+|+++|+|.+ +.|++|.+++.
T Consensus 28 ~~evivvdd~s~d~~~~~~~~~~~~~~~~--~-----~g~~~a~n~g~~----~a~~~~i~~~D~D~~-~~~~~l~~l~~ 95 (221)
T cd02522 28 PLEIIVVDGGSTDGTVAIARSAGVVVISS--P-----KGRARQMNAGAA----AARGDWLLFLHADTR-LPPDWDAAIIE 95 (221)
T ss_pred CcEEEEEeCCCCccHHHHHhcCCeEEEeC--C-----cCHHHHHHHHHH----hccCCEEEEEcCCCC-CChhHHHHHHH
Confidence 345556666666541 11256666642 2 358999999998 467999999999997 58999999866
Q ss_pred Hhh
Q 014850 90 LHL 92 (417)
Q Consensus 90 ~f~ 92 (417)
.+.
T Consensus 96 ~~~ 98 (221)
T cd02522 96 TLR 98 (221)
T ss_pred Hhh
Confidence 663
No 49
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=98.98 E-value=5.7e-09 Score=96.98 Aligned_cols=72 Identities=17% Similarity=0.193 Sum_probs=57.5
Q ss_pred CCceEEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHH
Q 014850 12 HPTIVKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI 83 (417)
Q Consensus 12 ~p~~~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~ 83 (417)
++-.+-|++|.+++. ....|++.++..+++ .+|++|+|.|++ .+.+|+|+++|+|.. ++|++
T Consensus 26 ~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~n-----~G~~~a~n~g~~----~a~gd~i~~lD~D~~-~~~~~ 95 (224)
T cd06442 26 IDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGK-----RGLGSAYIEGFK----AARGDVIVVMDADLS-HPPEY 95 (224)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCCC-----CChHHHHHHHHH----HcCCCEEEEEECCCC-CCHHH
Confidence 455666777777664 234678888888777 579999999999 478999999999997 58999
Q ss_pred HHHHHHHhhC
Q 014850 84 VLQAMCLHLG 93 (417)
Q Consensus 84 L~~~v~~f~d 93 (417)
|.+++..+.+
T Consensus 96 l~~l~~~~~~ 105 (224)
T cd06442 96 IPELLEAQLE 105 (224)
T ss_pred HHHHHHHHhc
Confidence 9999998753
No 50
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.95 E-value=7.9e-09 Score=94.90 Aligned_cols=89 Identities=12% Similarity=0.107 Sum_probs=65.0
Q ss_pred ccCCC-ceEEEEEcCCCCC--------CCCCC-cEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCC
Q 014850 9 RMNHP-TIVKVISENKGGL--------SDEIP-HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 78 (417)
Q Consensus 9 ~~~~p-~~~~v~~~~~~~~--------~~~~p-~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~ 78 (417)
.+++| -++-|++|.++|. ..+.| .++++..+++ +++++|+|.+++ .+++|||+++|+|.++
T Consensus 22 ~q~~~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~-----~G~~~~~n~g~~----~~~g~~v~~ld~Dd~~ 92 (214)
T cd04196 22 AQTYKNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKN-----LGVARNFESLLQ----AADGDYVFFCDQDDIW 92 (214)
T ss_pred hCcCCCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCC-----ccHHHHHHHHHH----hCCCCEEEEECCCccc
Confidence 44555 3555666666654 23454 5566666655 579999999988 5899999999999975
Q ss_pred CchHHHHHHHHHhhCCCCCCcEEEEeCCcccc
Q 014850 79 NNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY 110 (417)
Q Consensus 79 p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~ 110 (417)
.|+.|.+++..+. .++..+++.+.....
T Consensus 93 -~~~~l~~~~~~~~---~~~~~~~~~~~~~~~ 120 (214)
T cd04196 93 -LPDKLERLLKAFL---KDDKPLLVYSDLELV 120 (214)
T ss_pred -ChhHHHHHHHHHh---cCCCceEEecCcEEE
Confidence 8999999999864 567778887765543
No 51
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=98.94 E-value=1.3e-08 Score=91.39 Aligned_cols=70 Identities=16% Similarity=0.254 Sum_probs=50.3
Q ss_pred CceEEEEEcCCCCCC--------CCCC-cEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHH
Q 014850 13 PTIVKVISENKGGLS--------DEIP-HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI 83 (417)
Q Consensus 13 p~~~~v~~~~~~~~~--------~~~p-~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~ 83 (417)
+-++-|++|++++.. ...| .+.++.+++. ..+|++|+|.+++ .+++|+|+++|+|.+ +.|++
T Consensus 26 ~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~n~g~~----~a~g~~i~~lD~D~~-~~~~~ 96 (182)
T cd06420 26 PFEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQEDE----GFRKAKIRNKAIA----AAKGDYLIFIDGDCI-PHPDF 96 (182)
T ss_pred CCEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCCc----chhHHHHHHHHHH----HhcCCEEEEEcCCcc-cCHHH
Confidence 346667777776541 1112 3455554433 1479999999999 589999999999996 68999
Q ss_pred HHHHHHHh
Q 014850 84 VLQAMCLH 91 (417)
Q Consensus 84 L~~~v~~f 91 (417)
|.+++..+
T Consensus 97 l~~~~~~~ 104 (182)
T cd06420 97 IADHIELA 104 (182)
T ss_pred HHHHHHHh
Confidence 99999876
No 52
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.93 E-value=1.9e-08 Score=92.34 Aligned_cols=84 Identities=15% Similarity=0.184 Sum_probs=61.4
Q ss_pred ccCCC-ceEEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCC
Q 014850 9 RMNHP-TIVKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYAN 79 (417)
Q Consensus 9 ~~~~p-~~~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p 79 (417)
.+.+| ..|-|+++++++. ....+ +.+++-+++ .+++.++|.+++... ..++|+++++|+|.+ +
T Consensus 21 ~q~~~~~eiiivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n-----~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~-~ 92 (202)
T cd04185 21 AQTRPPDHIIVIDNASTDGTAEWLTSLGDLDN-IVYLRLPEN-----LGGAGGFYEGVRRAY-ELGYDWIWLMDDDAI-P 92 (202)
T ss_pred hccCCCceEEEEECCCCcchHHHHHHhcCCCc-eEEEECccc-----cchhhHHHHHHHHHh-ccCCCEEEEeCCCCC-c
Confidence 44554 4566677777664 12233 788887766 468899999988643 468999999999997 5
Q ss_pred chHHHHHHHHHhhCCCCCCcEEEEe
Q 014850 80 NPEIVLQAMCLHLGSKNENEFAFIQ 104 (417)
Q Consensus 80 ~p~~L~~~v~~f~d~~~~~~vg~VQ 104 (417)
+|++|.+++..+ .+++++++.
T Consensus 93 ~~~~l~~l~~~~----~~~~~~~~~ 113 (202)
T cd04185 93 DPDALEKLLAYA----DKDNPQFLA 113 (202)
T ss_pred ChHHHHHHHHHH----hcCCceEec
Confidence 899999999988 356777773
No 53
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=98.86 E-value=3.5e-08 Score=94.10 Aligned_cols=80 Identities=9% Similarity=0.066 Sum_probs=59.3
Q ss_pred CceEEEEEcCCCCC--------CCC--CCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchH
Q 014850 13 PTIVKVISENKGGL--------SDE--IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPE 82 (417)
Q Consensus 13 p~~~~v~~~~~~~~--------~~~--~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~ 82 (417)
+-+|-|++|.|+|. ..+ .+++.++.+++| .+|++|+|.|++ .+++|+++++|+|.. ++|+
T Consensus 40 ~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n-----~G~~~a~n~g~~----~a~g~~i~~lD~D~~-~~~~ 109 (243)
T PLN02726 40 DFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGK-----LGLGTAYIHGLK----HASGDFVVIMDADLS-HHPK 109 (243)
T ss_pred CeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCC-----CCHHHHHHHHHH----HcCCCEEEEEcCCCC-CCHH
Confidence 34666777777764 112 347777777666 469999999999 578999999999997 5999
Q ss_pred HHHHHHHHhhCCCCCCcEEEEeCC
Q 014850 83 IVLQAMCLHLGSKNENEFAFIQSP 106 (417)
Q Consensus 83 ~L~~~v~~f~d~~~~~~vg~VQ~p 106 (417)
+|.+++..+.+ ++..+|...
T Consensus 110 ~l~~l~~~~~~----~~~~~v~g~ 129 (243)
T PLN02726 110 YLPSFIKKQRE----TGADIVTGT 129 (243)
T ss_pred HHHHHHHHHHh----cCCcEEEEc
Confidence 99999998842 345555443
No 54
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.79 E-value=5.1e-08 Score=106.50 Aligned_cols=161 Identities=17% Similarity=0.222 Sum_probs=101.9
Q ss_pred chHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccc-hHHHHh------
Q 014850 49 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-LCILNE------ 121 (417)
Q Consensus 49 KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~-~~~f~~------ 121 (417)
|-=.+|.+.... +..-+||+++|+|+. ++|+.|.+++.-| +.||+||.+.. +..+..+. ....+.
T Consensus 426 ~r~~~y~~~~~L--~~~v~~il~vD~dT~-~~P~ai~~lv~~f---~~dp~VggaCG--~I~~~~~~w~v~~Q~FEY~Is 497 (862)
T KOG2571|consen 426 HRWVMYTAFKAL--MPSVDYILVVDADTR-LDPDALYHLVKVF---DEDPQVGGACG--RILNKGGSWVVAYQNFEYAIS 497 (862)
T ss_pred HHHHHHHHHHHh--cCcceEEEEecCCCc-cCcHHHHHHHHHh---ccCcccceecc--ccccCCCceEEeHHHHHHHHH
Confidence 333444444432 466779999999997 5999999999998 37899999976 22222222 111111
Q ss_pred -HhhhhhhhcCCceecccC--ceeecccccccccchhhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccch
Q 014850 122 -YIGKGIVGIQGPFYQGTG--TFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS 198 (417)
Q Consensus 122 -~~~~g~~~~~~~~~~Gtg--~~~Rr~al~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~ 198 (417)
..++..+..-|-+.|=.| +++|-+||.+-. ....||... .+
T Consensus 498 h~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~--------------~~~~y~~~~----------~~------------ 541 (862)
T KOG2571|consen 498 HNLQKATESVFGCVSCLPGCFSLYRASALMDQF--------------VEYFYGEKF----------SG------------ 541 (862)
T ss_pred HHHHHhhhhhceeEEecCchhHHHHHHHHhcch--------------HHhhhchhh----------cC------------
Confidence 123333344444444444 567887875321 011111100 00
Q ss_pred HHHHhhhhccccccCCCccccccccCcccchhHHHHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhhh
Q 014850 199 LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATG 275 (417)
Q Consensus 199 ~~~~~~v~~~~y~~~~~w~~~~G~~~~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~G 275 (417)
..-|..+ +..||-.+..++..+||++-|+.. .. ...++|+++.+++.||+||..|
T Consensus 542 -------------------~~~~~~~-~~geDR~L~~~llskgy~l~Y~a~-s~-a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 542 -------------------PRHGIQY-SLGEDRWLCTLLLSKGYRLKYVAA-SD-AETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred -------------------ccccccc-ccchhHHHHHHHHhccceeeeecc-cc-ccccCcHhHHHHHHHhhhhccc
Confidence 0012333 589999999999999999999853 33 4569999999999999999999
No 55
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=98.77 E-value=1.4e-07 Score=88.06 Aligned_cols=78 Identities=10% Similarity=0.040 Sum_probs=56.5
Q ss_pred ccCCCc--eEEEEEcCCCCC----------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCC
Q 014850 9 RMNHPT--IVKVISENKGGL----------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM 76 (417)
Q Consensus 9 ~~~~p~--~~~v~~~~~~~~----------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~ 76 (417)
.+++|. ++-|++|.|+|. ....++++++..+++.+ ...+.+.|+|.|++ .++|||++.+|+|.
T Consensus 21 ~q~~~~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~a~N~g~~----~a~gd~i~~lD~D~ 95 (219)
T cd06913 21 QQDFEGTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSP-SPKGVGYAKNQAIA----QSSGRYLCFLDSDD 95 (219)
T ss_pred hCCCCCCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCC-CCccHHHHHHHHHH----hcCCCEEEEECCCc
Confidence 456653 666677777654 11345788877654321 13578999999998 58999999999999
Q ss_pred CCCchHHHHHHHHHhh
Q 014850 77 YANNPEIVLQAMCLHL 92 (417)
Q Consensus 77 ~~p~p~~L~~~v~~f~ 92 (417)
+ ..|+.|.+.+..+.
T Consensus 96 ~-~~~~~l~~~~~~~~ 110 (219)
T cd06913 96 V-MMPQRIRLQYEAAL 110 (219)
T ss_pred c-CChhHHHHHHHHHH
Confidence 7 48999998887775
No 56
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=98.72 E-value=3.3e-08 Score=86.06 Aligned_cols=83 Identities=14% Similarity=0.193 Sum_probs=59.9
Q ss_pred CceEEEEEcCCCCC--------CCCC-CcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHH
Q 014850 13 PTIVKVISENKGGL--------SDEI-PHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI 83 (417)
Q Consensus 13 p~~~~v~~~~~~~~--------~~~~-p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~ 83 (417)
+-.+-|+.+.+++. .... +.+.++..+++ .+|+.|+|.+++ .+++|+|+++|+|..+ .|++
T Consensus 26 ~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~n~~~~----~~~~~~i~~~D~D~~~-~~~~ 95 (180)
T cd06423 26 KLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKEN-----GGKAGALNAGLR----HAKGDIVVVLDADTIL-EPDA 95 (180)
T ss_pred ceEEEEEeCCCccchHHHHHHHhccccceEEEEEeccc-----CCchHHHHHHHH----hcCCCEEEEECCCCCc-ChHH
Confidence 34555666666654 1111 44667776665 579999999999 4699999999999975 8999
Q ss_pred HHHHHHHhhCCCCCCcEEEEeCCcc
Q 014850 84 VLQAMCLHLGSKNENEFAFIQSPQY 108 (417)
Q Consensus 84 L~~~v~~f~d~~~~~~vg~VQ~pq~ 108 (417)
|..++..+. .++++++|.....
T Consensus 96 l~~~~~~~~---~~~~~~~v~~~~~ 117 (180)
T cd06423 96 LKRLVVPFF---ADPKVGAVQGRVR 117 (180)
T ss_pred HHHHHHHhc---cCCCeeeEeeeEE
Confidence 999966664 5678888865444
No 57
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=98.66 E-value=2.4e-07 Score=90.77 Aligned_cols=71 Identities=14% Similarity=0.311 Sum_probs=49.8
Q ss_pred CCceEEEEEcCCCCCC---------CCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchH
Q 014850 12 HPTIVKVISENKGGLS---------DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPE 82 (417)
Q Consensus 12 ~p~~~~v~~~~~~~~~---------~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~ 82 (417)
.+++.-|+.|+..++. .+.....|+.-+.... .-.+|.|.|.|++ .+++|+|+++|+|++ +.|+
T Consensus 32 ~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~~~--~f~~a~arN~g~~----~A~~d~l~flD~D~i-~~~~ 104 (281)
T PF10111_consen 32 DPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDNGE--PFSRAKARNIGAK----YARGDYLIFLDADCI-PSPD 104 (281)
T ss_pred CCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCCCC--CcCHHHHHHHHHH----HcCCCEEEEEcCCee-eCHH
Confidence 3555555555555431 2333444776554311 2479999999999 589999999999996 6899
Q ss_pred HHHHHHH
Q 014850 83 IVLQAMC 89 (417)
Q Consensus 83 ~L~~~v~ 89 (417)
+|.+++.
T Consensus 105 ~i~~~~~ 111 (281)
T PF10111_consen 105 FIEKLLN 111 (281)
T ss_pred HHHHHHH
Confidence 9999998
No 58
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=98.63 E-value=3.8e-07 Score=84.55 Aligned_cols=70 Identities=14% Similarity=0.104 Sum_probs=54.5
Q ss_pred CceEEEEEcCCCCC--------CCCCCc-EEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHH
Q 014850 13 PTIVKVISENKGGL--------SDEIPH-LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI 83 (417)
Q Consensus 13 p~~~~v~~~~~~~~--------~~~~p~-l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~ 83 (417)
+-++-|++|+|+|. ..+.|. ++++..+++ .+|++|+|.|++ .+.+|+|+++|+|.. .+|+.
T Consensus 30 ~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~n-----~G~~~a~~~g~~----~a~gd~i~~ld~D~~-~~~~~ 99 (211)
T cd04188 30 SYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPKN-----RGKGGAVRAGML----AARGDYILFADADLA-TPFEE 99 (211)
T ss_pred CEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcccC-----CCcHHHHHHHHH----HhcCCEEEEEeCCCC-CCHHH
Confidence 34566777777764 123555 477877766 369999999999 478999999999997 58999
Q ss_pred HHHHHHHhh
Q 014850 84 VLQAMCLHL 92 (417)
Q Consensus 84 L~~~v~~f~ 92 (417)
+.+++..+.
T Consensus 100 l~~l~~~~~ 108 (211)
T cd04188 100 LEKLEEALK 108 (211)
T ss_pred HHHHHHHHh
Confidence 999999864
No 59
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=98.60 E-value=6.2e-08 Score=84.31 Aligned_cols=127 Identities=16% Similarity=0.128 Sum_probs=84.3
Q ss_pred CCCceEEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchH
Q 014850 11 NHPTIVKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPE 82 (417)
Q Consensus 11 ~~p~~~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~ 82 (417)
+++..|-|+++.++++ ....++++|++++++ .++++|+|.|++ .+.+||++++|+|.++ .|+
T Consensus 25 ~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n-----~g~~~~~n~~~~----~a~~~~i~~ld~D~~~-~~~ 94 (169)
T PF00535_consen 25 DPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPEN-----LGFSAARNRGIK----HAKGEYILFLDDDDII-SPD 94 (169)
T ss_dssp GCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCC-----SHHHHHHHHHHH----H--SSEEEEEETTEEE--TT
T ss_pred CCCEEEEEecccccccccccccccccccccccccccccc-----cccccccccccc----ccceeEEEEeCCCceE-cHH
Confidence 4566676777777555 124689999999987 479999999999 5899999999999975 889
Q ss_pred HHHHHHHHhhCCCCCCcEEEEeCCccccC-cc-cc-h-----HHHHhHhhhhhhhcCCceecccCceeecccccc
Q 014850 83 IVLQAMCLHLGSKNENEFAFIQSPQYFYD-RP-EN-L-----CILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYG 149 (417)
Q Consensus 83 ~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d-~~-~~-~-----~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~ 149 (417)
+|..++..+.+. ++.+.....+....+ .. .. . ...+..............++|+++++||++++.
T Consensus 95 ~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~ 167 (169)
T PF00535_consen 95 WLEELVEALEKN--PPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFEE 167 (169)
T ss_dssp HHHHHHHHHHHC--TTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHH
T ss_pred HHHHHHHHHHhC--CCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHHh
Confidence 999999999642 233333332222221 00 01 1 123333444455566778899999999999864
No 60
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.55 E-value=7.5e-07 Score=89.43 Aligned_cols=73 Identities=12% Similarity=0.171 Sum_probs=57.3
Q ss_pred ccCCCc-eEEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCC
Q 014850 9 RMNHPT-IVKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYAN 79 (417)
Q Consensus 9 ~~~~p~-~~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p 79 (417)
.|.+++ ++-|++|.|+|. .++.|++.+++.+ | ++.++|.|.|++ .++||||+.+|+|..+
T Consensus 30 ~Qt~~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi~~~-n-----~G~~~arN~gl~----~a~g~yi~flD~DD~~- 98 (328)
T PRK10073 30 AQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLHQA-N-----AGVSVARNTGLA----VATGKYVAFPDADDVV- 98 (328)
T ss_pred hCCCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEECC-C-----CChHHHHHHHHH----hCCCCEEEEECCCCcc-
Confidence 455555 555666666664 2467899998754 4 479999999999 5899999999999975
Q ss_pred chHHHHHHHHHhh
Q 014850 80 NPEIVLQAMCLHL 92 (417)
Q Consensus 80 ~p~~L~~~v~~f~ 92 (417)
.|+.+.+++..+.
T Consensus 99 ~p~~l~~l~~~~~ 111 (328)
T PRK10073 99 YPTMYETLMTMAL 111 (328)
T ss_pred ChhHHHHHHHHHH
Confidence 8999999998874
No 61
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.49 E-value=1.9e-06 Score=84.76 Aligned_cols=82 Identities=12% Similarity=0.167 Sum_probs=60.9
Q ss_pred ccCCCc-eEEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCC
Q 014850 9 RMNHPT-IVKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYAN 79 (417)
Q Consensus 9 ~~~~p~-~~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p 79 (417)
.+++|+ ++-|++|.|++. ....|++.|+..+++ .+++.|+|.|++ .++||||+.+|+|.+.
T Consensus 29 ~Qt~~~~EiIVVDDgS~~~~~~~~~~~~~~~~ri~~i~~~~n-----~G~~~a~N~gi~----~a~g~~I~~lDaDD~~- 98 (279)
T PRK10018 29 RQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDIN-----SGACAVRNQAIM----LAQGEYITGIDDDDEW- 98 (279)
T ss_pred hCCCCCeEEEEEECCCCCHHHHHHHHHHcCCCCEEEEECCCC-----CCHHHHHHHHHH----HcCCCEEEEECCCCCC-
Confidence 467776 444555555532 114679999988776 579999999999 5899999999999975
Q ss_pred chHHHHHHHHHhhCCCCCCcEEEE
Q 014850 80 NPEIVLQAMCLHLGSKNENEFAFI 103 (417)
Q Consensus 80 ~p~~L~~~v~~f~d~~~~~~vg~V 103 (417)
.|+.|.+.+.++. ..+..+++
T Consensus 99 ~p~~l~~~~~~~~---~~~~~~~~ 119 (279)
T PRK10018 99 TPNRLSVFLAHKQ---QLVTHAFL 119 (279)
T ss_pred CccHHHHHHHHHH---hCCCccEE
Confidence 7999999998773 23445555
No 62
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=98.47 E-value=9.2e-07 Score=87.63 Aligned_cols=92 Identities=14% Similarity=0.177 Sum_probs=66.7
Q ss_pred CccCCCceEEEEEcCCCCC------CCC-CCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCC-EEEEecCCCCCC
Q 014850 8 ERMNHPTIVKVISENKGGL------SDE-IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAP-FMLNVDCDMYAN 79 (417)
Q Consensus 8 ~~~~~p~~~~v~~~~~~~~------~~~-~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e-~v~vlDaD~~~p 79 (417)
..+.+|....|+.||.... ... .|++.++.-.+|- +=||+.|.+++.. .++++ ++++++-|.+ +
T Consensus 26 ~~~~~~~~~iv~vDn~s~d~~~~~~~~~~~~~v~~i~~~~Nl-----G~agg~n~g~~~a--~~~~~~~~l~LN~D~~-~ 97 (305)
T COG1216 26 AAQTYPDDVIVVVDNGSTDGSLEALKARFFPNVRLIENGENL-----GFAGGFNRGIKYA--LAKGDDYVLLLNPDTV-V 97 (305)
T ss_pred hcCCCCCcEEEEccCCCCCCCHHHHHhhcCCcEEEEEcCCCc-----cchhhhhHHHHHH--hcCCCcEEEEEcCCee-e
Confidence 3455666666555554433 223 6999999999985 5688888888753 24444 9999999985 5
Q ss_pred chHHHHHHHHHhhCCCCCCcEEEEeCCcccc
Q 014850 80 NPEIVLQAMCLHLGSKNENEFAFIQSPQYFY 110 (417)
Q Consensus 80 ~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~ 110 (417)
+|++|.+++..+. .++.+++|+.....+
T Consensus 98 ~~~~l~~ll~~~~---~~~~~~~~~~~i~~~ 125 (305)
T COG1216 98 EPDLLEELLKAAE---EDPAAGVVGPLIRNY 125 (305)
T ss_pred ChhHHHHHHHHHH---hCCCCeEeeeeEecC
Confidence 9999999999984 677888887666654
No 63
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.42 E-value=2.2e-06 Score=77.28 Aligned_cols=123 Identities=11% Similarity=0.136 Sum_probs=76.9
Q ss_pred CceEEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHH
Q 014850 13 PTIVKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIV 84 (417)
Q Consensus 13 p~~~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L 84 (417)
+-.|-|+++.+++. ..+.|++.++..+++ .+|++|+|.+++ .+.+|+|+.+|+|.. ..|++|
T Consensus 29 ~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n-----~G~~~a~n~g~~----~a~~d~i~~~D~D~~-~~~~~l 98 (181)
T cd04187 29 DYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRN-----FGQQAALLAGLD----HARGDAVITMDADLQ-DPPELI 98 (181)
T ss_pred CeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCC-----CCcHHHHHHHHH----hcCCCEEEEEeCCCC-CCHHHH
Confidence 34566666666654 235778999888766 469999999999 478999999999997 589999
Q ss_pred HHHHHHhhCCCCCCcEEEEeCCccccCcc-cc--hHHHHhHhhhhhhhcCCceecccCceeeccccccc
Q 014850 85 LQAMCLHLGSKNENEFAFIQSPQYFYDRP-EN--LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGL 150 (417)
Q Consensus 85 ~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~-~~--~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~ 150 (417)
.+++..+ + .+.++......... +.. .. ...++. .........-+...|+..++||+++..+
T Consensus 99 ~~l~~~~-~--~~~~~v~g~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~i 162 (181)
T cd04187 99 PEMLAKW-E--EGYDVVYGVRKNRK-ESWLKRLTSKLFYR-LINKLSGVDIPDNGGDFRLMDRKVVDAL 162 (181)
T ss_pred HHHHHHH-h--CCCcEEEEEecCCc-chHHHHHHHHHHHH-HHHHHcCCCCCCCCCCEEEEcHHHHHHH
Confidence 9999884 2 23344333222111 111 11 111111 1111122233345667789999998654
No 64
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.38 E-value=1.5e-06 Score=78.02 Aligned_cols=85 Identities=12% Similarity=0.153 Sum_probs=64.3
Q ss_pred CCceEEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHH
Q 014850 12 HPTIVKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI 83 (417)
Q Consensus 12 ~p~~~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~ 83 (417)
++-++-|+++++++. ..+.|.++++..+++. +|++|+|.+++ .+.+|+++++|+|..+ .|++
T Consensus 27 ~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~-----G~~~a~n~g~~----~a~gd~i~~lD~D~~~-~~~~ 96 (185)
T cd04179 27 YDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNF-----GKGAAVRAGFK----AARGDIVVTMDADLQH-PPED 96 (185)
T ss_pred CCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCC-----CccHHHHHHHH----HhcCCEEEEEeCCCCC-CHHH
Confidence 466777777777765 2256778888888874 69999999999 5788999999999975 8999
Q ss_pred HHHHHHHhhCCCCCCcEEEEeCCcccc
Q 014850 84 VLQAMCLHLGSKNENEFAFIQSPQYFY 110 (417)
Q Consensus 84 L~~~v~~f~d~~~~~~vg~VQ~pq~f~ 110 (417)
|.+++..+.. +..++|..+....
T Consensus 97 l~~l~~~~~~----~~~~~v~g~~~~~ 119 (185)
T cd04179 97 IPKLLEKLLE----GGADVVIGSRFVR 119 (185)
T ss_pred HHHHHHHHhc----cCCcEEEEEeecC
Confidence 9999998642 3455565554433
No 65
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.31 E-value=5.6e-06 Score=70.08 Aligned_cols=79 Identities=16% Similarity=0.160 Sum_probs=54.9
Q ss_pred CceEEEEEcCCCCC----C----CCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHH
Q 014850 13 PTIVKVISENKGGL----S----DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIV 84 (417)
Q Consensus 13 p~~~~v~~~~~~~~----~----~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L 84 (417)
+-.+.|+.++++++ . ...+...++.+.++ .+|++++|.+++. .++|+++++|+|.+ ..|+++
T Consensus 26 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~----~~~d~v~~~d~D~~-~~~~~~ 95 (156)
T cd00761 26 NFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEEN-----QGLAAARNAGLKA----ARGEYILFLDADDL-LLPDWL 95 (156)
T ss_pred ceEEEEEeCCCCccHHHHHHHHHhcCCCeEEEEecCC-----CChHHHHHHHHHH----hcCCEEEEECCCCc-cCccHH
Confidence 34455555555544 1 11244566666555 5799999999994 58999999999997 589999
Q ss_pred HHHHHHhhCCCCCCcEEEEe
Q 014850 85 LQAMCLHLGSKNENEFAFIQ 104 (417)
Q Consensus 85 ~~~v~~f~d~~~~~~vg~VQ 104 (417)
...+..+. .+++.++|+
T Consensus 96 ~~~~~~~~---~~~~~~~v~ 112 (156)
T cd00761 96 ERLVAELL---ADPEADAVG 112 (156)
T ss_pred HHHHHHHh---cCCCceEEe
Confidence 98755553 556777775
No 66
>PRK10063 putative glycosyl transferase; Provisional
Probab=98.24 E-value=1.6e-05 Score=76.63 Aligned_cols=62 Identities=16% Similarity=0.068 Sum_probs=44.2
Q ss_pred ceEEEEEcCCCCC----CCC---CCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHH
Q 014850 14 TIVKVISENKGGL----SDE---IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQ 86 (417)
Q Consensus 14 ~~~~v~~~~~~~~----~~~---~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~ 86 (417)
-++-|++|.|+|. ..+ .+++++++.+ + .++++|+|.|++ .+.||+|+.+|+|... .|+.++.
T Consensus 34 ~EiIVvDdgStD~t~~i~~~~~~~~~i~~i~~~-~-----~G~~~A~N~Gi~----~a~g~~v~~ld~DD~~-~~~~~~~ 102 (248)
T PRK10063 34 FEWIVVDGGSNDGTREFLENLNGIFNLRFVSEP-D-----NGIYDAMNKGIA----MAQGRFALFLNSGDIF-HQDAANF 102 (248)
T ss_pred EEEEEEECcCcccHHHHHHHhcccCCEEEEECC-C-----CCHHHHHHHHHH----HcCCCEEEEEeCCccc-CcCHHHH
Confidence 3566666667664 111 2357888643 3 379999999999 5799999999998864 7877554
No 67
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=97.86 E-value=0.00029 Score=70.94 Aligned_cols=82 Identities=12% Similarity=0.115 Sum_probs=60.6
Q ss_pred CceEEEEEcCCCCC--------CCC----CCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCc
Q 014850 13 PTIVKVISENKGGL--------SDE----IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANN 80 (417)
Q Consensus 13 p~~~~v~~~~~~~~--------~~~----~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~ 80 (417)
+-++-|++|.|+|. ..+ .++++++..++| .+|++|+|.|++ .++||+|+++|||.. .+
T Consensus 107 ~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~N-----~G~~~A~~~Gi~----~a~gd~I~~~DaD~~-~~ 176 (333)
T PTZ00260 107 KYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLRN-----KGKGGAVRIGML----ASRGKYILMVDADGA-TD 176 (333)
T ss_pred CEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCCC-----CChHHHHHHHHH----HccCCEEEEEeCCCC-CC
Confidence 45777888888775 111 246888887777 479999999999 478999999999997 48
Q ss_pred hHHHHHHHHHhhCCCCCCcEEEEeC
Q 014850 81 PEIVLQAMCLHLGSKNENEFAFIQS 105 (417)
Q Consensus 81 p~~L~~~v~~f~d~~~~~~vg~VQ~ 105 (417)
|+.+.+++..+.+- .++.+++|.+
T Consensus 177 ~~~l~~l~~~l~~~-~~~~~dvV~G 200 (333)
T PTZ00260 177 IDDFDKLEDIMLKI-EQNGLGIVFG 200 (333)
T ss_pred HHHHHHHHHHHHHh-hccCCceEEe
Confidence 99999888877421 1345566654
No 68
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=97.69 E-value=3.9e-05 Score=76.69 Aligned_cols=193 Identities=21% Similarity=0.241 Sum_probs=114.6
Q ss_pred CCccCCCceEEEEEcCCCCC--------CCCCCcE---EEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCC
Q 014850 7 TERMNHPTIVKVISENKGGL--------SDEIPHL---VYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCD 75 (417)
Q Consensus 7 ~~~~~~p~~~~v~~~~~~~~--------~~~~p~l---~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD 75 (417)
++-+-||-++--..++++|+ -.++|++ .++.-++- | -.-|-.|+=-|.+ .+++|+|++.|.|
T Consensus 108 fts~Y~~~ElLfcv~s~eDpAi~vv~~Ll~kyp~VdAklf~gG~~v-g--~npKInN~mpgy~----~a~ydlvlisDsg 180 (431)
T KOG2547|consen 108 FTSQYHKYELLFCVESSEDPAIEVVERLLKKYPNVDAKLFFGGEKV-G--LNPKINNMMPGYR----AAKYDLVLISDSG 180 (431)
T ss_pred HhhccCceEEEEEEccCCCcHHHHHHHHHhhCCCcceEEEEccccc-c--cChhhhccCHHHH----HhcCCEEEEecCC
Confidence 45566777877777777776 2367765 34443332 1 2347777766777 4789999999999
Q ss_pred CCCCchHHHHHHHHHhhCCCCCCcEEEE-eCCccccCcccchHHHHhHhhhhhhhcCCceecccCceeecccccccccch
Q 014850 76 MYANNPEIVLQAMCLHLGSKNENEFAFI-QSPQYFYDRPENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQ 154 (417)
Q Consensus 76 ~~~p~p~~L~~~v~~f~d~~~~~~vg~V-Q~pq~f~d~~~~~~~f~~~~~~g~~~~~~~~~~Gtg~~~Rr~al~~~~~~~ 154 (417)
-.+ .||.+.++..-|+ ...++|+| |+|-.+. +-+- |..-...|.||.- -|-.+.+-.
T Consensus 181 I~m-~pdtildm~t~M~---shekmalvtq~py~~d-r~Gf------------~atle~~~fgTsh--~r~yl~~n~--- 238 (431)
T KOG2547|consen 181 IFM-KPDTILDMATTMM---SHEKMALVTQTPYCKD-RQGF------------DATLEQVYFGTSH--PRIYLSGNV--- 238 (431)
T ss_pred eee-cCchHHHHHHhhh---cccceeeecCCceeec-cccc------------hhhhhheeeccCC--ceEEEcccc---
Confidence 998 9999999999987 45799999 8774443 2221 0000012223220 111111100
Q ss_pred hhcccchhHHHHHHhhCCcHHHHHHHHHhhcCCCCCCCCcccchHHHHhhhhccccccCCCcccccccc--CcccchhHH
Q 014850 155 IEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCL--YGATAEDNL 232 (417)
Q Consensus 155 ~~~~~~~~~~~~~~~~G~~~~~~~s~~~~l~g~~~~~~~~~~~~~~~~~~v~~~~y~~~~~w~~~~G~~--~~~ltED~~ 232 (417)
.+..-.-|-++..+|.+++. | ||.. ...+.||.-
T Consensus 239 ---------~~~~c~tgms~~mrK~~ld~------------------------~-----------ggi~~f~~yLaedyF 274 (431)
T KOG2547|consen 239 ---------LGFNCSTGMSSMMRKEALDE------------------------C-----------GGISAFGGYLAEDYF 274 (431)
T ss_pred ---------ccccccccHHHHHHHHHHHH------------------------h-----------ccHHHHHHHHHHHHH
Confidence 00000002222333333221 1 1221 237899999
Q ss_pred HHHHHHhCCCeEEEecCCCceeecccCCChhHHHHHHHHHhh
Q 014850 233 TGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWAT 274 (417)
Q Consensus 233 ~s~rl~~~Gwr~~y~~p~~~~~~G~~P~tl~~~~~Qr~RWa~ 274 (417)
.+=.+..+||++.+.. .++. ...+-.+...+..|-.||..
T Consensus 275 aaksllSRG~ksaist-~pal-QnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 275 AAKSLLSRGWKSAIST-HPAL-QNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred HHHHHHhhhhhhhhcc-cchh-hhhhhhHHHHHHHHHHHhhh
Confidence 9999999999999854 2222 33566788888888889975
No 69
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=97.66 E-value=0.015 Score=58.39 Aligned_cols=70 Identities=14% Similarity=0.158 Sum_probs=53.7
Q ss_pred CceEEEEEcCCCCC--------CC-CCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHH
Q 014850 13 PTIVKVISENKGGL--------SD-EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI 83 (417)
Q Consensus 13 p~~~~v~~~~~~~~--------~~-~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~ 83 (417)
+-++-|++|.|+|. .. ..+++..+..+++ .+|++|+|.|++ .+++|+++++|||.+ .+|+.
T Consensus 38 ~~EIIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n-----~G~~~A~~~G~~----~A~gd~vv~~DaD~q-~~p~~ 107 (325)
T PRK10714 38 EYEILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRN-----YGQHSAIMAGFS----HVTGDLIITLDADLQ-NPPEE 107 (325)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCC-----CCHHHHHHHHHH----hCCCCEEEEECCCCC-CCHHH
Confidence 34677777777765 11 1356766665555 579999999999 579999999999997 58999
Q ss_pred HHHHHHHhh
Q 014850 84 VLQAMCLHL 92 (417)
Q Consensus 84 L~~~v~~f~ 92 (417)
+.+++..+.
T Consensus 108 i~~l~~~~~ 116 (325)
T PRK10714 108 IPRLVAKAD 116 (325)
T ss_pred HHHHHHHHH
Confidence 999998874
No 70
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=97.50 E-value=0.00029 Score=70.14 Aligned_cols=86 Identities=19% Similarity=0.187 Sum_probs=57.5
Q ss_pred CCceEEEEEcCCCCC----CCCCCcEEEEEcCCC-CC-CCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHH
Q 014850 12 HPTIVKVISENKGGL----SDEIPHLVYISREKR-PK-HPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVL 85 (417)
Q Consensus 12 ~p~~~~v~~~~~~~~----~~~~p~l~y~~R~~~-~~-~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~ 85 (417)
.+..|-|++|.|+|. ..+.. ..++.+.+. +. ....+|++|+|.+++ .+++|+|+.+|||.+.++|++|.
T Consensus 61 ~~~EIIVVDDgStD~T~~ia~~~~-~~v~~~~~~~~~~~~n~Gkg~A~~~g~~----~a~gd~vv~lDaD~~~~~p~~l~ 135 (306)
T PRK13915 61 LVDELIVIDSGSTDATAERAAAAG-ARVVSREEILPELPPRPGKGEALWRSLA----ATTGDIVVFVDADLINFDPMFVP 135 (306)
T ss_pred CCcEEEEEeCCCccHHHHHHHHhc-chhhcchhhhhccccCCCHHHHHHHHHH----hcCCCEEEEEeCccccCCHHHHH
Confidence 355777888888875 11111 111111100 00 013589999999998 47899999999999535899999
Q ss_pred HHHHHhhCCCCCCcEEEEeC
Q 014850 86 QAMCLHLGSKNENEFAFIQS 105 (417)
Q Consensus 86 ~~v~~f~d~~~~~~vg~VQ~ 105 (417)
+++..+. .++++++|.+
T Consensus 136 ~l~~~l~---~~~~~~~V~g 152 (306)
T PRK13915 136 GLLGPLL---TDPGVHLVKA 152 (306)
T ss_pred HHHHHHH---hCCCceEEEE
Confidence 9998885 3567888864
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=96.72 E-value=0.0056 Score=57.78 Aligned_cols=68 Identities=13% Similarity=0.113 Sum_probs=52.3
Q ss_pred ceEEEEEcCCCCCC---CCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHH
Q 014850 14 TIVKVISENKGGLS---DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCL 90 (417)
Q Consensus 14 ~~~~v~~~~~~~~~---~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v~~ 90 (417)
..|-|+++.|+|.. -+.+++.++.. ++ .+++.+.|.|+. .+.+|+|+++|||.++ .|+.+..++..
T Consensus 27 ~eiivvD~gStD~t~~i~~~~~~~v~~~-~~-----~g~~~~~n~~~~----~a~~d~vl~lDaD~~~-~~~~~~~l~~~ 95 (229)
T cd02511 27 DEIIVVDSGSTDRTVEIAKEYGAKVYQR-WW-----DGFGAQRNFALE----LATNDWVLSLDADERL-TPELADEILAL 95 (229)
T ss_pred CEEEEEeCCCCccHHHHHHHcCCEEEEC-CC-----CChHHHHHHHHH----hCCCCEEEEEeCCcCc-CHHHHHHHHHH
Confidence 36778888877641 12345666666 33 479999999998 5789999999999975 89999999988
Q ss_pred hh
Q 014850 91 HL 92 (417)
Q Consensus 91 f~ 92 (417)
+.
T Consensus 96 ~~ 97 (229)
T cd02511 96 LA 97 (229)
T ss_pred Hh
Confidence 74
No 72
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=95.09 E-value=0.076 Score=45.77 Aligned_cols=68 Identities=12% Similarity=0.127 Sum_probs=47.4
Q ss_pred CccCCCc-eEEEEEcCCCCC--------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCC
Q 014850 8 ERMNHPT-IVKVISENKGGL--------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 78 (417)
Q Consensus 8 ~~~~~p~-~~~v~~~~~~~~--------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~ 78 (417)
..+.+++ ++-|++|.|+|. ....+.+.+...+.+ .+++.|+|.++.. ..+|+++.+|+|.+
T Consensus 26 ~~q~~~~~eiivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~----~~~~~~~~~d~d~~- 95 (291)
T COG0463 26 LNQTYKDFEIIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERN-----GGLGAARNAGLEY----ARGDYIVFLDADDQ- 95 (291)
T ss_pred HhhhhcceEEEEEeCCCCCChHHHHHHHhhhcceEEEeecccC-----CChHHHHHhhHHh----ccCCEEEEEccCCC-
Confidence 3466776 677777777775 111234555555555 5799999999984 67799999999997
Q ss_pred CchHHHH
Q 014850 79 NNPEIVL 85 (417)
Q Consensus 79 p~p~~L~ 85 (417)
..+....
T Consensus 96 ~~~~~~~ 102 (291)
T COG0463 96 HPPELIP 102 (291)
T ss_pred CCHHHHH
Confidence 5555544
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=94.33 E-value=0.24 Score=45.87 Aligned_cols=77 Identities=12% Similarity=0.189 Sum_probs=56.9
Q ss_pred CceEEEEEcCCCCC----------CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchH
Q 014850 13 PTIVKVISENKGGL----------SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPE 82 (417)
Q Consensus 13 p~~~~v~~~~~~~~----------~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~ 82 (417)
+.++-|++|+|.|- ....+++....|.+.- +=.-|.-++++ .+.|+|+++.|||-. -.|.
T Consensus 35 ~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l~pR~~kl-----GLgtAy~hgl~----~a~g~fiviMDaDls-HhPk 104 (238)
T KOG2978|consen 35 KYEIIIVDDASPDGTQEVAKALQKIYGEDNILLKPRTKKL-----GLGTAYIHGLK----HATGDFIVIMDADLS-HHPK 104 (238)
T ss_pred ceEEEEEeCCCCCccHHHHHHHHHHhCCCcEEEEeccCcc-----cchHHHHhhhh----hccCCeEEEEeCccC-CCch
Confidence 44566788877763 2468899999998764 45567777777 589999999999985 5888
Q ss_pred HHHHHHHHhhCCCCCCcEEEE
Q 014850 83 IVLQAMCLHLGSKNENEFAFI 103 (417)
Q Consensus 83 ~L~~~v~~f~d~~~~~~vg~V 103 (417)
|+-+.+..- .+.+..+|
T Consensus 105 ~ipe~i~lq----~~~~~div 121 (238)
T KOG2978|consen 105 FIPEFIRLQ----KEGNYDIV 121 (238)
T ss_pred hHHHHHHHh----hccCccee
Confidence 887776654 44455666
No 74
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=90.78 E-value=1.5 Score=44.41 Aligned_cols=46 Identities=13% Similarity=0.195 Sum_probs=38.4
Q ss_pred HHHHHHHhcCCCCCCCEEEEecCCCCCCchHH---HHHHHHHhhCCCCCCcEEEEeC
Q 014850 52 AMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI---VLQAMCLHLGSKNENEFAFIQS 105 (417)
Q Consensus 52 aLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~---L~~~v~~f~d~~~~~~vg~VQ~ 105 (417)
|||.+.. ..++++++++|.|.+ +.||| +.++++.+. .|++|..|.+
T Consensus 88 aln~vF~----~~~~~~vIILEDDl~-~sPdFf~yf~~~l~~y~---~D~~v~~ISa 136 (334)
T cd02514 88 ALTQTFN----LFGYSFVIILEDDLD-IAPDFFSYFQATLPLLE---EDPSLWCISA 136 (334)
T ss_pred HHHHHHH----hcCCCEEEEECCCCc-cCHhHHHHHHHHHHHHh---cCCCEEEEEe
Confidence 7888876 358999999999996 69995 488888884 7899999964
No 75
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=90.18 E-value=0.88 Score=43.25 Aligned_cols=50 Identities=14% Similarity=0.023 Sum_probs=33.3
Q ss_pred cEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHH
Q 014850 32 HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVL 85 (417)
Q Consensus 32 ~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~ 85 (417)
++..+...++. .--||-.||.|...+....+.++++.=|.|.+ |..+.+.
T Consensus 36 ~i~vi~Q~~~~---~FNR~~llNvG~~~a~k~~~~dc~i~hDVDll-P~~~~~~ 85 (219)
T cd00899 36 RIFVIEQVGNF---RFNRAKLLNVGFLEALKDGDWDCFIFHDVDLL-PENDRNL 85 (219)
T ss_pred EEEEEEecCCc---cchhhhhhhHHHHHHhhcCCccEEEEeccccc-ccCcccc
Confidence 34445544442 35599999997554332346899999999995 7766644
No 76
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=89.72 E-value=0.63 Score=44.03 Aligned_cols=60 Identities=12% Similarity=0.140 Sum_probs=44.1
Q ss_pred cEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEE
Q 014850 32 HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFI 103 (417)
Q Consensus 32 ~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~V 103 (417)
.+..+.+++. ..-|-++|.|++ .++++|++.+.=|..+.+++++.+++..|. .++++|++
T Consensus 30 ~i~i~~~~~~-----~s~~~~yN~a~~----~a~~~ylvflHqDv~i~~~~~l~~il~~~~---~~~~~G~i 89 (217)
T PF13712_consen 30 LIEIDNVRNA-----KSMAAAYNEAME----KAKAKYLVFLHQDVFIINENWLEDILEIFE---EDPNIGMI 89 (217)
T ss_dssp EEEEE-SSS------S-TTTHHHHHGG----G--SSEEEEEETTEE-SSHHHHHHHHHHHH---H-TTEEEE
T ss_pred EEEEeccCCC-----cCHHHHHHHHHH----hCCCCEEEEEeCCeEEcchhHHHHHHHHHh---hCCCccEE
Confidence 3455555544 468899999999 689999999999999989999999999994 46777766
No 77
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=82.98 E-value=4.3 Score=40.08 Aligned_cols=68 Identities=18% Similarity=0.057 Sum_probs=51.9
Q ss_pred eEEEEEcCCCCC--------C--CCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCC--CCCchH
Q 014850 15 IVKVISENKGGL--------S--DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM--YANNPE 82 (417)
Q Consensus 15 ~~~v~~~~~~~~--------~--~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~--~~p~p~ 82 (417)
++-|++|++.|. + ....+++++.-.+|. +|+||.--++- .+.|++++..|||. ..++-+
T Consensus 106 eiiVvddgs~d~T~~~a~k~s~K~~~d~irV~~l~~nr-----gKGgAvR~g~l----~~rG~~ilfadAdGaTkf~d~e 176 (323)
T KOG2977|consen 106 EIIVVDDGSTDSTVEVALKFSRKLGDDNIRVIKLKKNR-----GKGGAVRKGML----SSRGQKILFADADGATKFADLE 176 (323)
T ss_pred eEEEeCCCCchhHHHHHHHHHHHcCcceEEEeehhccC-----CCCcceehhhH----hccCceEEEEcCCCCccCCCHH
Confidence 566777888775 2 356789999998884 69999988765 48999999999995 335667
Q ss_pred HHHHHHHHh
Q 014850 83 IVLQAMCLH 91 (417)
Q Consensus 83 ~L~~~v~~f 91 (417)
.|.+++.-.
T Consensus 177 kLe~al~~~ 185 (323)
T KOG2977|consen 177 KLEKALNDK 185 (323)
T ss_pred HHHHHHHhh
Confidence 788887654
No 78
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=82.22 E-value=13 Score=41.74 Aligned_cols=75 Identities=20% Similarity=0.243 Sum_probs=51.2
Q ss_pred cccchhHHHHHHHHhCCCeEEEecCCCceeecccCC-ChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHH
Q 014850 225 GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP-SGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAY 303 (417)
Q Consensus 225 ~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~-tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y 303 (417)
-.++||+.-|+...++|-++.|++ ....|..=+ .+.+-..=-..=+.|+-|..+++.--.+. .+|.+.+-|.+
T Consensus 408 lhLsEDIfaG~n~~lRGG~i~h~e---y~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrLg---~~ld~~R~LSf 481 (817)
T PF02364_consen 408 LHLSEDIFAGMNATLRGGRIKHCE---YIQCGKGRDVGFNSILNFETKIASGMGEQMLSREYYRLG---TRLDFFRFLSF 481 (817)
T ss_pred ccccHHHHHHHHHHhcCCceeehh---hhhcccccccCchhhhhhHhHhcCCccchhhhHHHHHhh---ccCCHHHHHHH
Confidence 388999999999999999999963 345565543 33333333445678887777664544444 67787777765
Q ss_pred HH
Q 014850 304 LW 305 (417)
Q Consensus 304 ~~ 305 (417)
..
T Consensus 482 yy 483 (817)
T PF02364_consen 482 YY 483 (817)
T ss_pred Hh
Confidence 54
No 79
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=79.34 E-value=2.6 Score=33.87 Aligned_cols=59 Identities=14% Similarity=0.152 Sum_probs=36.6
Q ss_pred EEEEEcCCCCC----CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCC
Q 014850 16 VKVISENKGGL----SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYA 78 (417)
Q Consensus 16 ~~v~~~~~~~~----~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~ 78 (417)
+-|++++|++. ..++|.+..+....+.. ....+...+|..++. ..++++++.+|||.++
T Consensus 22 i~i~d~~s~D~t~~~l~~~~~v~i~~~~~~~~-~~~~~~~~~~~~~~~---~~~~dWvl~~D~DEfl 84 (97)
T PF13704_consen 22 IYIYDDGSTDGTREILRALPGVGIIRWVDPYR-DERRQRAWRNALIER---AFDADWVLFLDADEFL 84 (97)
T ss_pred EEEEECCCCccHHHHHHhCCCcEEEEeCCCcc-chHHHHHHHHHHHHh---CCCCCEEEEEeeeEEE
Confidence 55677777765 34567777776665321 112234444444442 3589999999999876
No 80
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=73.46 E-value=4.4 Score=40.62 Aligned_cols=40 Identities=13% Similarity=0.293 Sum_probs=30.1
Q ss_pred CCCCCEEEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEE
Q 014850 63 MTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFI 103 (417)
Q Consensus 63 ~~~~e~v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~V 103 (417)
.+..+||+++|+|++ |.+++-.....+.-......+.++|
T Consensus 125 ~a~T~~v~~~DvD~~-ps~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 125 GARTDYVFLLDVDFL-PSPGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred hcCcceEEEecceee-eCcchHHHHHHHhhhhccCCceEEE
Confidence 478999999999995 8988877777665433345677776
No 81
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=59.81 E-value=12 Score=29.45 Aligned_cols=28 Identities=14% Similarity=-0.115 Sum_probs=17.1
Q ss_pred cccCccc---chhHHHHHHHHhCCCeEEEec
Q 014850 221 GCLYGAT---AEDNLTGLVIHSKGWRSGYCL 248 (417)
Q Consensus 221 G~~~~~l---tED~~~s~rl~~~Gwr~~y~~ 248 (417)
||++.-. -||.|++.||..+|.++....
T Consensus 36 Gfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~ 66 (78)
T PF02709_consen 36 GFDERFWGWGGEDDDLYNRLWKAGLKIVRVP 66 (78)
T ss_dssp SS-SS-TSCSSHHHHHHHHHHHTT---B-SS
T ss_pred CCCccccccCccHHHHHHHHHHcCCeEEecC
Confidence 5554433 399999999999999977743
No 82
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=45.68 E-value=58 Score=33.53 Aligned_cols=40 Identities=8% Similarity=0.004 Sum_probs=29.3
Q ss_pred chHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 014850 49 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 92 (417)
Q Consensus 49 KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v~~f~ 92 (417)
....+-+||+. .+.|+|++.|||.=.-+++.+++++..+.
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 45667788874 23499999999963337899998887653
No 83
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=35.90 E-value=2e+02 Score=26.26 Aligned_cols=53 Identities=13% Similarity=0.102 Sum_probs=38.0
Q ss_pred cEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCC-CCCchHHHHHHHHHhh
Q 014850 32 HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLHL 92 (417)
Q Consensus 32 ~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~-~~p~p~~L~~~v~~f~ 92 (417)
++.++.++.. .+.++++-.|+.... .+.|.+++++||+ .+ .++.+.+++..+.
T Consensus 63 ~~~~~~~~~~-----~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~-~~~~i~~l~~~~~ 116 (229)
T cd02540 63 NVEFVLQEEQ-----LGTGHAVKQALPALK--DFEGDVLVLYGDVPLI-TPETLQRLLEAHR 116 (229)
T ss_pred CcEEEECCCC-----CCCHHHHHHHHHhhc--cCCCeEEEEeCCcccc-CHHHHHHHHHHHH
Confidence 5677776543 467999999887531 1368899999998 33 5788888887764
No 84
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=35.53 E-value=74 Score=32.56 Aligned_cols=56 Identities=21% Similarity=0.468 Sum_probs=33.6
Q ss_pred CCcEEEEEcCCCCCCCC-------CCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHH
Q 014850 30 IPHLVYISREKRPKHPH-------HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQA 87 (417)
Q Consensus 30 ~p~l~y~~R~~~~~~~~-------~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~ 87 (417)
.+.+.|+.-+..+.... .+.-.+|+..++..+ ..++|+|++-|+|.+ |+|+.|+.+
T Consensus 137 ~~KIiy~~l~~~~~~g~~~~w~~E~~qR~~l~~l~~~~~-~~~dDliivSDvDEI-P~p~~l~~L 199 (356)
T PF04724_consen 137 HDKIIYVTLDDPPEKGRKDPWDRENYQRNALNGLLRLAG-IQDDDLIIVSDVDEI-PSPETLKFL 199 (356)
T ss_pred hcceEEEEecCcCCCCCCchhHHHHHHHHHHHHHhhhcC-CCCCCEEEEcCcccc-cCHHHHHHH
Confidence 45777777665432110 011123433333222 468999999999995 899888654
No 85
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=33.68 E-value=1.4e+02 Score=35.92 Aligned_cols=83 Identities=16% Similarity=0.100 Sum_probs=46.3
Q ss_pred cccchhHHHHHHHHhCCCeEEEecCCCceeecccCC-ChhHHHHHHHHHhhhhhHHHHhhcchhhhhhccCchHhHHHHH
Q 014850 225 GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP-SGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAY 303 (417)
Q Consensus 225 ~~ltED~~~s~rl~~~Gwr~~y~~p~~~~~~G~~P~-tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~~l~~~qrl~y 303 (417)
-.+.||+.-|+-...+|-++-+|+ ....|..=+ -+..-..=-..=+.|+-|-.+++.--.+. ..+.+.+.|.+
T Consensus 1172 inlsEDIfAG~n~tlRgG~itH~E---YiQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrLG---~~ldffRmLSf 1245 (1679)
T KOG0916|consen 1172 INLSEDIFAGFNATLRGGNITHHE---YIQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRLG---TQLDFFRMLSF 1245 (1679)
T ss_pred cccchHhhhhhhHHhhCCCcccce---eeecccccccCcchhhhhhhhhcCCCcchhhhHHHHHhc---ccccHHHHHHH
Confidence 388999999999999999998853 233443322 11111111223466776666553332332 55666666644
Q ss_pred HH-HHHHHhhH
Q 014850 304 LW-ILTWGLRS 313 (417)
Q Consensus 304 ~~-~~~~~l~~ 313 (417)
.. +..+++..
T Consensus 1246 yftt~GF~~n~ 1256 (1679)
T KOG0916|consen 1246 YFTTVGFYFNN 1256 (1679)
T ss_pred HhccccHHHHh
Confidence 33 23344433
No 86
>PF15050 SCIMP: SCIMP protein
Probab=32.13 E-value=68 Score=27.64 Aligned_cols=43 Identities=21% Similarity=0.330 Sum_probs=22.9
Q ss_pred hhHhhhhHHHHHHHHHHHHHHHHH-H----HHHHcCCCCCeEeCcCCCc
Q 014850 369 SWWVNNCMARIVTTSAWLFGLVNA-A----LEQFGFSEAVFEITQKIHR 412 (417)
Q Consensus 369 ~~w~~~~~w~i~~~~~~~~a~~~~-l----l~~l~~~~~~F~VTpK~~~ 412 (417)
+||+.. ||++.++.-.+.++.-+ + .+++.++..+|++|.--+.
T Consensus 2 ~WWr~n-FWiiLAVaII~vS~~lglIlyCvcR~~lRqGkkweiakp~k~ 49 (133)
T PF15050_consen 2 SWWRDN-FWIILAVAIILVSVVLGLILYCVCRWQLRQGKKWEIAKPLKQ 49 (133)
T ss_pred chHHhc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccceeccchhh
Confidence 478765 67775544322222111 1 2344577788888754333
No 87
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=31.37 E-value=64 Score=31.12 Aligned_cols=27 Identities=19% Similarity=0.225 Sum_probs=21.1
Q ss_pred CCCCEEEEecCCCCCCchHHHHHHHHHh
Q 014850 64 TNAPFMLNVDCDMYANNPEIVLQAMCLH 91 (417)
Q Consensus 64 ~~~e~v~vlDaD~~~p~p~~L~~~v~~f 91 (417)
++.+.++.+|-|+++ ..+-|++.+.-+
T Consensus 85 ~~~~Wf~~~DDDtyv-~~~~L~~~L~~~ 111 (252)
T PF02434_consen 85 SDKDWFCFADDDTYV-NVENLRRLLSKY 111 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS
T ss_pred CCceEEEEEeCCcee-cHHHHHHHHhhC
Confidence 578999999999998 788888777654
No 88
>PHA01631 hypothetical protein
Probab=28.10 E-value=51 Score=30.03 Aligned_cols=73 Identities=14% Similarity=0.111 Sum_probs=42.2
Q ss_pred chHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhCCCCCCcEEEEeCCccccCcccchHHHHhHhhhhhh
Q 014850 49 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENLCILNEYIGKGIV 128 (417)
Q Consensus 49 KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v~~f~d~~~~~~vg~VQ~pq~f~d~~~~~~~f~~~~~~g~~ 128 (417)
=|-.|-..++.. ...+-|+++++|+|-++|+-+.+ + .++.+.-..-|-. ..+.+
T Consensus 56 IAk~Ll~Iln~~-s~i~DDi~~iIDSDV~ipn~~~~-------~---~~~~v~t~CiPA~---------------~kp~~ 109 (176)
T PHA01631 56 IAKQLLTIVNFA-KNIEDDIIAIIDSDLIIPNLREI-------I---PNERVFTPCYWLY---------------YDWAN 109 (176)
T ss_pred HHHHHHHHHHhh-ccCCccEEEEeccceEecCcccc-------c---cCCCccceeeeee---------------ecCCC
Confidence 455555554421 13578999999999999874321 1 1223332222211 11112
Q ss_pred hcCCceecccCceeeccccc
Q 014850 129 GIQGPFYQGTGTFHRRDVVY 148 (417)
Q Consensus 129 ~~~~~~~~Gtg~~~Rr~al~ 148 (417)
- -.++|-|||.+++|+-+.
T Consensus 110 ~-v~~FC~sTNf~~pr~~l~ 128 (176)
T PHA01631 110 E-IRPFCSGTNYIFRKSLLP 128 (176)
T ss_pred c-EEEEEccccEEeeHHHhH
Confidence 2 237899999999998874
No 89
>COG3162 Predicted membrane protein [Function unknown]
Probab=27.36 E-value=3.7e+02 Score=22.46 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=12.5
Q ss_pred ccCCChhHHHHHHHH
Q 014850 257 CASPSGPAGMRQQKR 271 (417)
Q Consensus 257 ~~P~tl~~~~~Qr~R 271 (417)
++++.+.++.+||+|
T Consensus 10 ~a~p~f~eLv~kr~~ 24 (102)
T COG3162 10 AANPRFRELVRKRRR 24 (102)
T ss_pred ccCHhHHHHHHHHHH
Confidence 577888999998887
No 90
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=25.76 E-value=2.9e+02 Score=24.28 Aligned_cols=54 Identities=7% Similarity=0.031 Sum_probs=36.0
Q ss_pred cEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 014850 32 HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 92 (417)
Q Consensus 32 ~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v~~f~ 92 (417)
.+.++..++. ..+-++++-.|++. ..+.|.+++++||+-.-.++.+++++..+.
T Consensus 63 ~v~~v~~~~~----~~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 116 (188)
T TIGR03310 63 NITLVHNPQY----AEGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVTPDIIQLLLEAFA 116 (188)
T ss_pred CeEEEECcCh----hcCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCCHHHHHHHHHHHH
Confidence 4666665432 12455667777662 245789999999983237889999887764
No 91
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=21.61 E-value=1.5e+02 Score=31.76 Aligned_cols=50 Identities=14% Similarity=0.264 Sum_probs=40.0
Q ss_pred CcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHH
Q 014850 31 PHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAM 88 (417)
Q Consensus 31 p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v 88 (417)
.++.++...+. ...++.+|+.|++. ..+.+++...|.|..+ .++||.++-
T Consensus 314 ~~i~~i~~~~~----~fsr~~~Ld~g~~~---~~~d~L~f~~Dvd~~f-~~~fL~rcR 363 (499)
T PF05679_consen 314 SRIKWISVKTG----EFSRGAALDVGAKK---FPPDSLLFFCDVDMVF-TSDFLNRCR 363 (499)
T ss_pred cceEEEEecCC----CccHHHHHHhhccc---CCCCcEEEEEeCCccc-CHHHHHHHH
Confidence 36888888732 25799999999884 4567899999999987 789999874
No 92
>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.
Probab=21.45 E-value=1e+02 Score=29.56 Aligned_cols=59 Identities=12% Similarity=-0.008 Sum_probs=38.2
Q ss_pred chHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHH---HHHHHHHhhCCCCCCcEEEEeCCcccc
Q 014850 49 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI---VLQAMCLHLGSKNENEFAFIQSPQYFY 110 (417)
Q Consensus 49 KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~---L~~~v~~f~d~~~~~~vg~VQ~pq~f~ 110 (417)
-+.|.|++|-.. ....++|+.+|.|.++ -|.- ....+.-+++...+..++.++.++.+.
T Consensus 89 q~~a~~DCl~r~--~~~~~~v~f~DiDE~l-vP~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 150 (285)
T PF01697_consen 89 QIAAYNDCLLRY--RYRAKWVAFIDIDEFL-VPTNAPTYPEEFEDLLREFPNISAGAYSFRNSWF 150 (285)
T ss_pred HHHHHHHHHHHh--hhhceEEEEeccccEE-EeccccchhhHHHHHHhhccccceEEEEEeEEEE
Confidence 488999987643 4679999999999876 4544 223344444333455677776665543
No 93
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=21.32 E-value=5.4e+02 Score=23.42 Aligned_cols=40 Identities=10% Similarity=0.044 Sum_probs=30.0
Q ss_pred CchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHh
Q 014850 48 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLH 91 (417)
Q Consensus 48 ~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v~~f 91 (417)
+=..++-.|++. .+.+++++++||+=.-.++.+++++..+
T Consensus 79 G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 118 (200)
T PRK02726 79 GPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQL 118 (200)
T ss_pred ChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHh
Confidence 344566677773 3468999999999655889998888765
No 94
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=20.89 E-value=2.7e+02 Score=27.59 Aligned_cols=59 Identities=14% Similarity=0.205 Sum_probs=38.1
Q ss_pred CCCCCcEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHH
Q 014850 27 SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAM 88 (417)
Q Consensus 27 ~~~~p~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~~~p~p~~L~~~v 88 (417)
.+.+|++.|+.-........- +---|+|..++-..-+.++|+.+|+|+.. ..|-..+.+
T Consensus 58 i~~~~~~~yl~~~s~~~F~s~--~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~-S~dnF~k~l 116 (346)
T COG4092 58 IDPMPRVLYLDFGSPEPFASE--TICANNGADYSHEKCESNLVLFLDVDCFG-SSDNFAKML 116 (346)
T ss_pred hccccceEEEecCCCccccch--hhhhhccchhhhccccccEEEEEeccccc-cHHHHHHHH
Confidence 568999999987765432212 33334555544334568999999999986 545544544
No 95
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=20.24 E-value=3.5e+02 Score=27.75 Aligned_cols=52 Identities=10% Similarity=0.062 Sum_probs=35.9
Q ss_pred cEEEEEcCCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCC-CCCchHHHHHHHHHhh
Q 014850 32 HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLHL 92 (417)
Q Consensus 32 ~l~y~~R~~~~~~~~~~KAGaLN~~l~~~~~~~~~e~v~vlDaD~-~~p~p~~L~~~v~~f~ 92 (417)
.+.++.++.. .+-++++-.++.. ..+.|.++++++|+ .+ +++.+.+++..+.
T Consensus 65 ~i~~~~~~~~-----~G~~~ai~~a~~~---l~~~~~~lv~~~D~p~i-~~~~~~~l~~~~~ 117 (451)
T TIGR01173 65 DVNWVLQAEQ-----LGTGHAVLQALPF---LPDDGDVLVLYGDVPLI-SAETLERLLEAHR 117 (451)
T ss_pred CcEEEEcCCC-----CchHHHHHHHHHh---cCCCCcEEEEECCcCCc-CHHHHHHHHHHHh
Confidence 4666554322 3567888888774 23457899999998 44 6788888887763
Done!