BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014853
(417 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 151/193 (78%), Gaps = 6/193 (3%)
Query: 206 RSVFEVDCIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTS 265
RSV+E+DCIPLWG+VSI+G R EMEDA AV P F+K+PI+ML+GD +GMS L LT
Sbjct: 8 RSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLTG 65
Query: 266 HFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLK 325
HFFGVYDGHGG + A+YCR+R+H ALAEEI IK+ L+ +T RQ QW+K FTSCFL
Sbjct: 66 HFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLT 125
Query: 326 VDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLC 385
VD EI GK GR+V +S+ + EAVA ETVGSTAVVALVCSSHI+V+NCGDSRAVL
Sbjct: 126 VDGEIEGKIGRAVVG----SSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLF 181
Query: 386 RGKEPMVLSVDHK 398
RGKE M LSVDHK
Sbjct: 182 RGKEAMPLSVDHK 194
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 258 bits (658), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 151/195 (77%), Gaps = 6/195 (3%)
Query: 204 VSRSVFEVDCIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGL 263
+ RSV+E+DCIPLWG+VSI+G R EMEDA AV P F+K+PI+ML+GD +GMS L L
Sbjct: 3 MGRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHL 60
Query: 264 TSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCF 323
T HFFGVYDGHGG + A+YCR+R+H ALAEEI IK+ L +T RQ QW+K FTSCF
Sbjct: 61 TGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCF 120
Query: 324 LKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAV 383
L VD EI GK GR+V +S+ + EAVA ETVGSTAVVALVCSSHI+V+NCGDSRAV
Sbjct: 121 LTVDGEIEGKIGRAVVG----SSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAV 176
Query: 384 LCRGKEPMVLSVDHK 398
L RGKE M LSVDHK
Sbjct: 177 LFRGKEAMPLSVDHK 191
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 258 bits (658), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 150/193 (77%), Gaps = 6/193 (3%)
Query: 206 RSVFEVDCIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTS 265
RSV+E+DCIPLWG+VSI+G R EMEDA AV P F+K+PI+ML+GD +GMS L LT
Sbjct: 11 RSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLTG 68
Query: 266 HFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLK 325
HFFGVYDGHGG + A+YCR+R+H ALAEEI IK+ L +T RQ QW+K FTSCFL
Sbjct: 69 HFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLT 128
Query: 326 VDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLC 385
VD EI GK GR+V +S+ + EAVA ETVGSTAVVALVCSSHI+V+NCGDSRAVL
Sbjct: 129 VDGEIEGKIGRAVVG----SSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLF 184
Query: 386 RGKEPMVLSVDHK 398
RGKE M LSVDHK
Sbjct: 185 RGKEAMPLSVDHK 197
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 257 bits (657), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 150/193 (77%), Gaps = 6/193 (3%)
Query: 206 RSVFEVDCIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTS 265
RSV+E+DCIPLWG+VSI+G R EMEDA AV P F+K+PI+ML+GD +GMS L LT
Sbjct: 18 RSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLTG 75
Query: 266 HFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLK 325
HFFGVYDGHGG + A+YCR+R+H ALAEEI IK+ L +T RQ QW+K FTSCFL
Sbjct: 76 HFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLT 135
Query: 326 VDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLC 385
VD EI GK GR+V +S+ + EAVA ETVGSTAVVALVCSSHI+V+NCGDSRAVL
Sbjct: 136 VDGEIEGKIGRAVVG----SSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLF 191
Query: 386 RGKEPMVLSVDHK 398
RGKE M LSVDHK
Sbjct: 192 RGKEAMPLSVDHK 204
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 257 bits (657), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 150/193 (77%), Gaps = 6/193 (3%)
Query: 206 RSVFEVDCIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTS 265
RSV+E+DCIPLWG+VSI+G R EMEDA AV P F+K+PI+ML+GD +GMS L LT
Sbjct: 9 RSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLTG 66
Query: 266 HFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLK 325
HFFGVYDGHGG + A+YCR+R+H ALAEEI IK+ L +T RQ QW+K FTSCFL
Sbjct: 67 HFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLT 126
Query: 326 VDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLC 385
VD EI GK GR+V +S+ + EAVA ETVGSTAVVALVCSSHI+V+NCGDSRAVL
Sbjct: 127 VDGEIEGKIGRAVVG----SSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLF 182
Query: 386 RGKEPMVLSVDHK 398
RGKE M LSVDHK
Sbjct: 183 RGKEAMPLSVDHK 195
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/186 (66%), Positives = 143/186 (76%), Gaps = 6/186 (3%)
Query: 213 CIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYD 272
CIPLWG+VSI+G R EMEDA AV P F+K+PI+ML+GD +GMS L LT HFFGVYD
Sbjct: 1 CIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDH--EGMSPSLTHLTGHFFGVYD 58
Query: 273 GHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGG 332
GHGG + A+YCR+R+H ALAEEI IK+ L +T RQ QW+K FTSCFL VD EI G
Sbjct: 59 GHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEG 118
Query: 333 KAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMV 392
K GR+V +S+ + EAVA ETVGSTAVVALVCSSHI+V+NCGDSRAVL RGKE M
Sbjct: 119 KIGRAVVG----SSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMP 174
Query: 393 LSVDHK 398
LSVDHK
Sbjct: 175 LSVDHK 180
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 129/194 (66%), Gaps = 24/194 (12%)
Query: 205 SRSVFEVDCIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLT 264
SRS+FE C+PL+G SI GRRPEMED+V+ +PRF+++ L+ RV +G + L+
Sbjct: 2 SRSLFEFKCVPLYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFN---PHLS 58
Query: 265 SHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFL 324
+HFFGVYDGHGGSQ ANYCRER+HLAL EEI K D T Q +W+K + F+
Sbjct: 59 AHFFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDT---WQEKWKKALFNSFM 115
Query: 325 KVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVL 384
+VD EI E + A APETVGST+VVA+V +HI VANCGDSRAVL
Sbjct: 116 RVDSEI----------------ETV--AHAPETVGSTSVVAVVFPTHIFVANCGDSRAVL 157
Query: 385 CRGKEPMVLSVDHK 398
CRGK P+ LSVDHK
Sbjct: 158 CRGKTPLALSVDHK 171
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 124/194 (63%), Gaps = 30/194 (15%)
Query: 205 SRSVFEVDCIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLT 264
SRS+FE +PL+G SI GRRPEMEDAV+ +PRF++ ++ R D S
Sbjct: 2 SRSLFEFKSVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGR-FDPQS------A 54
Query: 265 SHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFL 324
+HFFGVYDGHGGSQ ANYCRER+HLALAEEI K L D T + + W+K + FL
Sbjct: 55 AHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEK---WKKALFNSFL 111
Query: 325 KVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVL 384
+VD EI E+VAPETVGST+VVA+V SHI VANCGDSRAVL
Sbjct: 112 RVDSEI--------------------ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVL 151
Query: 385 CRGKEPMVLSVDHK 398
CRGK + LSVDHK
Sbjct: 152 CRGKTALPLSVDHK 165
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 123/192 (64%), Gaps = 30/192 (15%)
Query: 207 SVFEVDCIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSH 266
S+FE +PL+G SI GRRPEMEDAV+ +PRF++ ++ R D S +H
Sbjct: 1 SLFEFKSVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGR-FDPQS------AAH 53
Query: 267 FFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKV 326
FFGVYDGHGGSQ ANYCRER+HLALAEEI K L+D T + + W+K + FL+V
Sbjct: 54 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEK---WKKALFNSFLRV 110
Query: 327 DDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCR 386
D EI E+VAPETVGST+VVA+V SHI VANCGDSRAVLCR
Sbjct: 111 DSEI--------------------ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCR 150
Query: 387 GKEPMVLSVDHK 398
GK + LSVDHK
Sbjct: 151 GKTALPLSVDHK 162
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 118/185 (63%), Gaps = 30/185 (16%)
Query: 214 IPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDG 273
+PL+G SI GRRPEMEDAV+ +PRF++ ++ R D S +HFFGVYDG
Sbjct: 23 VPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGR-FDPQS------AAHFFGVYDG 75
Query: 274 HGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGK 333
HGGSQ ANYCRER+HLALAEEI K L D T + + W+K + FL+VD EI
Sbjct: 76 HGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEK---WKKALFNSFLRVDSEI--- 129
Query: 334 AGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMVL 393
E+VAPETVGST+VVA+V SHI VANCGDSRAVLCRGK + L
Sbjct: 130 -----------------ESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPL 172
Query: 394 SVDHK 398
SVDHK
Sbjct: 173 SVDHK 177
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 81/185 (43%), Gaps = 46/185 (24%)
Query: 217 WGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSH-FFGVYDGHG 275
+G S++G R EMEDA V + +P +GL S FF VYDGH
Sbjct: 24 YGLSSMQGWRVEMEDAHTAV---IGLP-----------------SGLESWSFFAVYDGHA 63
Query: 276 GSQAANYCRERI--HLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGK 333
GSQ A YC E + H+ ++ K + S + + G + FL++D+ +
Sbjct: 64 GSQVAKYCCEHLLDHITNNQDF---KGSAGAPSVENVKNG-----IRTGFLEIDEHMRVM 115
Query: 334 AGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMVL 393
+ + A + GSTAV L+ H NCGDSR +LCR ++
Sbjct: 116 SEKKHGA---------------DRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFF 160
Query: 394 SVDHK 398
+ DHK
Sbjct: 161 TQDHK 165
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 81/185 (43%), Gaps = 46/185 (24%)
Query: 217 WGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSH-FFGVYDGHG 275
+G S++G R EMEDA V + +P +GL S FF VYDGH
Sbjct: 24 YGLSSMQGWRVEMEDAHTAV---IGLP-----------------SGLESWSFFAVYDGHA 63
Query: 276 GSQAANYCRERI--HLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGK 333
GSQ A YC E + H+ ++ K + S + + G + FL++D+ +
Sbjct: 64 GSQVAKYCCEHLLDHITNNQDF---KGSAGAPSVENVKNG-----IRTGFLEIDEHMRVM 115
Query: 334 AGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMVL 393
+ + A + GSTAV L+ H NCGDSR +LCR ++
Sbjct: 116 SEKKHGA---------------DRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFF 160
Query: 394 SVDHK 398
+ DHK
Sbjct: 161 TQDHK 165
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 28/132 (21%)
Query: 267 FFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKV 326
+F VYDGHGG AA++C + + + + KN E T FL++
Sbjct: 151 YFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKN--------------LETLLTLAFLEI 196
Query: 327 DDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSS-HIIVANCGDSRAVLC 385
D A S +A T G+TA VAL+ ++VA+ GDSRA+LC
Sbjct: 197 DKAFSSHARLSADA-------------TLLTSGTTATVALLRDGIELVVASVGDSRAILC 243
Query: 386 RGKEPMVLSVDH 397
R +PM L++DH
Sbjct: 244 RKGKPMKLTIDH 255
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 28/132 (21%)
Query: 267 FFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKV 326
+F VYDGHGG AA++C + + + + KN E T FL++
Sbjct: 37 YFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKN--------------LETLLTLAFLEI 82
Query: 327 DDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSS-HIIVANCGDSRAVLC 385
D A S +A T G+TA VAL+ ++VA+ GDSRA+LC
Sbjct: 83 DKAFSSHARLSADA-------------TLLTSGTTATVALLRDGIELVVASVGDSRAILC 129
Query: 386 RGKEPMVLSVDH 397
R +PM L++DH
Sbjct: 130 RKGKPMKLTIDH 141
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 267 FFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKV 326
FF VYDGHGG++ A YC +HL +K + + + ++EK FL
Sbjct: 53 FFAVYDGHGGAEVAQYCS--LHLPT-----FLK------TVEAYGRKEFEKALKEAFLGF 99
Query: 327 DDEI-GGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLC 385
D + K + GD++ +A + G TAVVAL+ + VAN GDSR V+C
Sbjct: 100 DATLLQEKVIEELKVLSGDSAGS--DAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVC 157
Query: 386 RGKEPMVLSVDHKVKKVLLFCHLCPTGMKACL 417
R + + +S DHK + + + + G + L
Sbjct: 158 RNGKALEMSFDHKPEDTVEYQRIEKAGGRVTL 189
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 81/187 (43%), Gaps = 45/187 (24%)
Query: 217 WGSVSIRGRRPEMEDA-VAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHG 275
+G S++G R EMEDA AVV G+ H L + FF VYDGH
Sbjct: 26 YGLSSMQGWRVEMEDAHTAVV------------------GIPHGLEDWS--FFAVYDGHA 65
Query: 276 GSQAANYCRERI--HLALAEEIGII--KNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIG 331
GS+ ANYC + H+ E+ + + S + + G + FLK+D+ +
Sbjct: 66 GSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNG-----IRTGFLKIDEYM- 119
Query: 332 GKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPM 391
+ + G + GSTAV ++ HI NCGDSRAVL R +
Sbjct: 120 -RNFSDLRNG-------------MDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVC 165
Query: 392 VLSVDHK 398
+ DHK
Sbjct: 166 FSTQDHK 172
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 14/153 (9%)
Query: 267 FFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKV 326
+GV++G+ G++ N+ +R+ L +G + + + ++ S +
Sbjct: 66 LYGVFNGYDGNRVTNFVAQRLSAELL--LGQLNAEHAEADVRRVLLQAFDVVERSFLESI 123
Query: 327 DDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCR 386
DD + KA + E+ + G+ AVVA++ ++ + VAN G +RA+LC+
Sbjct: 124 DDALAEKASLQLERLKTLEREI--------SGGAMAVVAVLLNNKLYVANVGTNRALLCK 175
Query: 387 ----GKEPMVLSVDHKVKKVLLFCHLCPTGMKA 415
G + L+VDH + L G+ A
Sbjct: 176 STVDGLQVTQLNVDHTTENEDELFRLSQLGLDA 208
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 259 CLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNL--TDESTKVTRQGQWE 316
C++ + + + GH G A E +A E+ + + N+ TDE+ K + +
Sbjct: 44 CISDNNTSLYAILSGHNGVTVA----ENALQEMAAELLLGQLNVCNTDEAVKELIRQSFM 99
Query: 317 KTFTSCFLKVDDEIGGKAGRSVN-AGDGDASEVI---FEAVAPE--------TVGSTAVV 364
F ++ + K ++ + DG I FE V + +VGS+AV+
Sbjct: 100 SVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVL 159
Query: 365 ALVCSSHIIVANCGDSRAVLCRGKEP-----MVLSVDHKV 399
AL+ SH+ + N G+ RA+LC+ E LSVDH +
Sbjct: 160 ALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNL 199
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 267 FFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKV 326
+GV++G+ G++ N+ +R+ L +G + + + ++ S +
Sbjct: 66 LYGVFNGYDGNRVTNFVAQRLSAELL--LGQLNAEHAEADVRRVLLQAFDVVERSFLESI 123
Query: 327 DDEIGGKAGRSVNAGDG-------DASEVIFEAVAPE----TVGSTAVVALVCSSHIIVA 375
DD + KA +G + I E + + G+ AVVA++ ++ + VA
Sbjct: 124 DDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVA 183
Query: 376 NCGDSRAVLCR----GKEPMVLSVDHKVKKVLLFCHLCPTGMKA 415
N G +RA+LC+ G + L+VDH + L G+ A
Sbjct: 184 NVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDA 227
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 21/166 (12%)
Query: 267 FFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKV 326
+GV++G+ G++ N+ +R+ L +G + + + ++ S +
Sbjct: 64 LYGVFNGYDGNRVTNFVAQRLSAELL--LGQLNAEHAEADVRRVLLQAFDVVERSFLESI 121
Query: 327 DDEIGGKAGRSVNAGDG-------DASEVIFEAVAPETV------GSTAVVALVCSSHII 373
DD + KA +G + I E + +T+ G+ AVVA++ ++ +
Sbjct: 122 DDALAEKASLQSQLPEGVPQHQLPPQYQKILERL--KTLEREISGGAMAVVAVLLNNKLY 179
Query: 374 VANCGDSRAVLCR----GKEPMVLSVDHKVKKVLLFCHLCPTGMKA 415
VAN G +RA+LC+ G + L+VDH + L G+ A
Sbjct: 180 VANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDA 225
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 65/181 (35%), Gaps = 49/181 (27%)
Query: 267 FFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQG-------QWEKTF 319
GV+DGH G + ER+ +A + ++ + E G QW K
Sbjct: 68 LLGVFDGHAGCACSQAVSERLFYYIA--VSLLPHETLLEIENAVESGRALLPILQWHKHP 125
Query: 320 TSCFLKVDDEIGGKAGRS-------VNAG---DGDASEVIFEAVA--------------P 355
F K ++ + R+ +N G D D E + A P
Sbjct: 126 NDYFSKEASKLYFNSLRTYWQELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVGDP 185
Query: 356 ETV-----------GSTAVVALVCSSHIIVANCGDSRAVLCRGKE-----PMVLSVDHKV 399
+ G+TA VA V + VAN GDSRA+L +E + LS DH
Sbjct: 186 NSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNA 245
Query: 400 K 400
+
Sbjct: 246 Q 246
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 64/181 (35%), Gaps = 49/181 (27%)
Query: 267 FFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQG-------QWEKTF 319
GV+DGH G + ER+ +A + ++ + E G QW K
Sbjct: 68 LLGVFDGHAGCACSQAVSERLFYYIA--VSLLPHETLLEIENAVESGRALLPILQWHKHP 125
Query: 320 TSCFLKVDDEIGGKAGRS-------VNAG---DGDASEVIFEAVA--------------P 355
F K ++ R+ +N G D D E + A P
Sbjct: 126 NDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDP 185
Query: 356 ETV-----------GSTAVVALVCSSHIIVANCGDSRAVLCRGKE-----PMVLSVDHKV 399
+ G+TA VA V + VAN GDSRA+L +E + LS DH
Sbjct: 186 NSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNA 245
Query: 400 K 400
+
Sbjct: 246 Q 246
>pdb|4EO3|A Chain A, Peroxiredoxin Nitroreductase Fusion Enzyme
pdb|4EO3|B Chain B, Peroxiredoxin Nitroreductase Fusion Enzyme
Length = 322
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 26/106 (24%)
Query: 87 LLKIFPESGSSSISCDAVILENE------------------------DDEILSVIADPNG 122
+L FP++G+S + +AV E +D +++++DP G
Sbjct: 28 ILFFFPKAGTSGSTREAVEFSRENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEG 87
Query: 123 IINEGLVVLDPGKSLTNSVEIDSGRILAKAI--ILGESSVEQVPTA 166
I++E VL+ GK++ ++ ID + K + E V++V A
Sbjct: 88 ILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEA 133
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|B Chain B, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|C Chain C, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|D Chain D, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
Length = 250
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 358 VGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMVLSVDHKV 399
+G+T + +II A+ GDSR + R E +L+ DH +
Sbjct: 102 MGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSL 143
>pdb|3PFG|A Chain A, X-Ray Crystal Structure The N,N-Dimethyltransferase Tylm1
From Streptomyces Fradiae In Complex With Sam And
Dtdp-Phenol
pdb|3PFH|A Chain A, X-Ray Crystal Structure The N,N-Dimethyltransferase Tylm1
From Streptomyces Fradiae In Complex With Sah And
Dtdp-Quip3n
pdb|3PFH|D Chain D, X-Ray Crystal Structure The N,N-Dimethyltransferase Tylm1
From Streptomyces Fradiae In Complex With Sah And
Dtdp-Quip3n
Length = 263
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 277 SQAANYCRERIHLALA-EEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAG 335
S+ R +H +A + GI + + T TR+ Q+E+ FT+ L V+ GG +G
Sbjct: 182 SREGEATRIEVHYLVAGPDRGITHHEESHRITLFTRE-QYERAFTAAGLSVEFMPGGPSG 240
Query: 336 RSVNAG 341
R + G
Sbjct: 241 RGLFTG 246
>pdb|3PX3|A Chain A, Structure Of Tylm1 From Streptomyces Fradiae H123a Mutant
In Complex With Sah And Dtdp-Quip3n
pdb|3PX3|D Chain D, Structure Of Tylm1 From Streptomyces Fradiae H123a Mutant
In Complex With Sah And Dtdp-Quip3n
Length = 263
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 288 HLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAG 341
+L + GI + + T TR+ Q+E+ FT+ L V+ GG +GR + G
Sbjct: 194 YLVAGPDRGITHHEESHRITLFTRE-QYERAFTAAGLSVEFMPGGPSGRGLFTG 246
>pdb|3PX2|A Chain A, Structure Of Tylm1 From Streptomyces Fradiae H123n Mutant
In Complex With Sah And Dtdp-Quip3n
pdb|3PX2|D Chain D, Structure Of Tylm1 From Streptomyces Fradiae H123n Mutant
In Complex With Sah And Dtdp-Quip3n
Length = 262
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 277 SQAANYCRERIHLALA-EEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAG 335
S+ R +H +A + GI + + T TR+ Q+E+ FT+ L V+ GG +G
Sbjct: 182 SREGEATRIEVHYLVAGPDRGITHHEESHRITLFTRE-QYERAFTAAGLSVEFMPGGPSG 240
Query: 336 RSVNAG 341
R + G
Sbjct: 241 RGLFTG 246
>pdb|2C1T|A Chain A, Structure Of The Kap60p:nup2 Complex
pdb|2C1T|B Chain B, Structure Of The Kap60p:nup2 Complex
Length = 454
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 301 NLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGS 360
N+ + + + + G EK F +C +D+I KA + + G+ + + E +AP+ G+
Sbjct: 382 NINENADFIEKAGGMEKIF-NCQQNENDKIYEKAYKIIETYFGEEEDAVDETMAPQNAGN 440
Query: 361 T 361
T
Sbjct: 441 T 441
>pdb|1UN0|A Chain A, Crystal Structure Of Yeast Karyopherin (Importin) Alpha In
Complex With A Nup2p N-Terminal Fragment
pdb|1UN0|B Chain B, Crystal Structure Of Yeast Karyopherin (Importin) Alpha In
Complex With A Nup2p N-Terminal Fragment
Length = 443
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 301 NLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGS 360
N+ + + + + G EK F +C +D+I KA + + G+ + + E +AP+ G+
Sbjct: 382 NINENADFIEKAGGMEKIF-NCQQNENDKIYEKAYKIIETYFGEEEDAVDETMAPQNAGN 440
Query: 361 T 361
T
Sbjct: 441 T 441
>pdb|1DO5|A Chain A, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|B Chain B, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|C Chain C, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|D Chain D, Human Copper Chaperone For Superoxide Dismutase Domain Ii
Length = 154
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
Query: 233 VAVVPRFMKI-PIRMLIGDRVIDGMSHCLNGLTSHFFGVY-------------DG--HGG 276
V V RF+++ P R LI + IDG+ L+GL H +G DG HGG
Sbjct: 16 VQGVVRFLQLTPERCLI-EGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGG 74
Query: 277 SQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGR 336
Q ++ R + A+ G + DE KV W+ S + ++ G+ G
Sbjct: 75 PQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV-----WDVIGRSLIIDEGEDDLGRGGH 129
Query: 337 SVNAGDGDASEVIFEAVAPETVG 359
++ G++ E + + + G
Sbjct: 130 PLSKITGNSGERLACGIIARSAG 152
>pdb|1WA5|B Chain B, Crystal Structure Of The Exportin Cse1p Complexed With Its
Cargo (Kap60p) And Rangtp
Length = 530
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 301 NLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGS 360
N+ + + + + G EK F +C +D+I KA + + G+ + + E +AP+ G+
Sbjct: 469 NINENADFIEKAGGMEKIF-NCQQNENDKIYEKAYKIIETYFGEEEDAVDETMAPQNAGN 527
Query: 361 T 361
T
Sbjct: 528 T 528
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,928,843
Number of Sequences: 62578
Number of extensions: 485797
Number of successful extensions: 1284
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1227
Number of HSP's gapped (non-prelim): 42
length of query: 417
length of database: 14,973,337
effective HSP length: 101
effective length of query: 316
effective length of database: 8,652,959
effective search space: 2734335044
effective search space used: 2734335044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)