Query 014853
Match_columns 417
No_of_seqs 236 out of 1525
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 09:08:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014853.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014853hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0697 Protein phosphatase 1B 100.0 3.5E-32 7.7E-37 260.6 14.2 166 212-417 19-184 (379)
2 PLN03145 Protein phosphatase 2 100.0 3.3E-30 7E-35 262.1 19.6 161 214-416 64-224 (365)
3 KOG0698 Serine/threonine prote 100.0 3.6E-30 7.7E-35 258.8 19.1 162 211-416 36-200 (330)
4 PF00481 PP2C: Protein phospha 100.0 1.8E-29 3.9E-34 243.6 15.9 155 217-416 2-158 (254)
5 PTZ00224 protein phosphatase 2 99.9 7E-27 1.5E-31 238.7 18.1 143 213-416 20-163 (381)
6 KOG0699 Serine/threonine prote 99.9 1.2E-26 2.7E-31 229.0 13.0 61 357-417 329-389 (542)
7 COG0631 PTC1 Serine/threonine 99.9 1E-24 2.2E-29 212.9 14.4 152 217-412 10-162 (262)
8 KOG0700 Protein phosphatase 2C 99.9 5.6E-23 1.2E-27 206.7 12.8 139 262-411 96-260 (390)
9 cd00143 PP2Cc Serine/threonine 99.9 1.9E-21 4.1E-26 184.0 19.1 155 216-415 2-156 (254)
10 smart00332 PP2Cc Serine/threon 99.9 6.1E-21 1.3E-25 181.5 20.1 153 216-415 7-159 (255)
11 PRK14559 putative protein seri 99.8 1.5E-20 3.2E-25 202.8 16.4 152 216-402 376-529 (645)
12 KOG1323 Serine/threonine phosp 99.8 1.2E-17 2.6E-22 164.3 14.2 132 262-412 141-298 (493)
13 PF13672 PP2C_2: Protein phosp 99.4 3.1E-12 6.7E-17 119.4 14.0 136 220-399 3-139 (212)
14 smart00331 PP2C_SIG Sigma fact 98.9 1.7E-08 3.7E-13 92.8 12.6 96 264-397 29-127 (193)
15 KOG0618 Serine/threonine phosp 98.7 2E-08 4.3E-13 110.7 7.8 146 215-416 522-676 (1081)
16 KOG1379 Serine/threonine prote 98.7 4.8E-08 1E-12 96.8 9.6 98 264-395 102-206 (330)
17 TIGR02865 spore_II_E stage II 97.2 0.0055 1.2E-07 68.8 14.5 116 223-399 561-678 (764)
18 PF07228 SpoIIE: Stage II spor 96.8 0.037 8E-07 50.4 14.0 95 264-395 3-101 (193)
No 1
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=99.98 E-value=3.5e-32 Score=260.61 Aligned_cols=166 Identities=33% Similarity=0.407 Sum_probs=138.3
Q ss_pred cccceEEEEccccCCCCCcccEEEecCccccchhhccccccccCCccccCCCCceEEEEEcCCCCcHHHHHHHHHHHHHH
Q 014853 212 DCIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLAL 291 (417)
Q Consensus 212 ~~~~~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~~g~~~~~~~~~~~ffgVfDGHGG~~aAe~as~~L~~~L 291 (417)
+...+||.+|+||||-+|||+|.+.-.+. + .-.+|.||||||||.|+++|++|+++|.+.|
T Consensus 19 GNglryg~SSMQGWR~eMEDah~A~~~l~-------------~------~l~dWSfFAVfDGHAGs~va~~c~~hLlehi 79 (379)
T KOG0697|consen 19 GNGLRYGVSSMQGWRVEMEDAHTAVAGLP-------------S------PLEDWSFFAVFDGHAGSQVANHCAEHLLEHI 79 (379)
T ss_pred CCceeeeeccccchhhhhhhhhhhhhcCC-------------C------CccCceEEEEEcCccchHHHHHHHHHHHHHh
Confidence 34468999999999999999998765432 1 1247999999999999999999999999999
Q ss_pred HHHHhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeeeCCe
Q 014853 292 AEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSH 371 (417)
Q Consensus 292 ~~~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~~~~ 371 (417)
...-.+... ......+..++-++..|+++|+.+..... ......++||||+.+++.+.+
T Consensus 80 ~sse~F~~~------~k~gsv~~~~~GIrtGFL~iDE~mr~~~~---------------~~~~~drsGsTAVcv~vsp~h 138 (379)
T KOG0697|consen 80 ISSEEFRGM------TKNGSVENVEKGIRTGFLSIDEIMRTLSD---------------ISKGSDRSGSTAVCVFVSPTH 138 (379)
T ss_pred hhhHHHhhh------ccCCcHHHHHhhHhhcceeHHHHHhhhhh---------------hhcccccCCceEEEEEecCce
Confidence 875443321 22235578899999999999998886541 112345699999999999999
Q ss_pred EEEEEeCcceEEEEeCCeeEECCCCCCCCCHhHHHHHHcCCCEEEC
Q 014853 372 IIVANCGDSRAVLCRGKEPMVLSVDHKVKKVLLFCHLCPTGMKACL 417 (417)
Q Consensus 372 L~VANvGDSRAVL~r~g~a~~LT~DHkp~~~~Er~RI~~aGG~V~~ 417 (417)
+|++|||||||||||+|+++.-|.||||.+|.|++||+.|||.|-+
T Consensus 139 ~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~EkeRIqnAGGSVMI 184 (379)
T KOG0697|consen 139 IYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKEKERIQNAGGSVMI 184 (379)
T ss_pred EEEEecCcchhheecCCceEEeccCCCCCChHHHHHHhcCCCeEEE
Confidence 9999999999999999999999999999999999999999999853
No 2
>PLN03145 Protein phosphatase 2c; Provisional
Probab=99.97 E-value=3.3e-30 Score=262.07 Aligned_cols=161 Identities=32% Similarity=0.433 Sum_probs=129.9
Q ss_pred cceEEEEccccCCCCCcccEEEecCccccchhhccccccccCCccccCCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHH
Q 014853 214 IPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAE 293 (417)
Q Consensus 214 ~~~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~~g~~~~~~~~~~~ffgVfDGHGG~~aAe~as~~L~~~L~~ 293 (417)
+..+|..+++|.|++|||++++..++.+. .+.. .....+..||||||||||+.+|+|++++|+..|.+
T Consensus 64 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~-----------~~~~-~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~ 131 (365)
T PLN03145 64 VVRSGAWADIGSRSSMEDVYICVDNFMSD-----------FGLK-NSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVE 131 (365)
T ss_pred ceEEEEEccccCCCCCCCceEeccccccc-----------cccc-ccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 34579999999999999999887665210 0000 01122478999999999999999999999999875
Q ss_pred HHhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeeeCCeEE
Q 014853 294 EIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHII 373 (417)
Q Consensus 294 ~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~~~~L~ 373 (417)
.... ...++++|.++|.++|.+|.+... ......+|||+++++|.++++|
T Consensus 132 ~~~~--------------~~~~~~al~~af~~~d~~~~~~~~----------------~~~~~~~GTTavv~li~~~~l~ 181 (365)
T PLN03145 132 DEDF--------------PREIEKVVSSAFLQTDTAFAEACS----------------LDASLASGTTALAALVVGRSLV 181 (365)
T ss_pred hhcc--------------chhHHHHHHHHHHHHhHHHHhhhc----------------cccCCCCcCcEEEEEEECCeEE
Confidence 3211 135778899999999999876431 0112359999999999999999
Q ss_pred EEEeCcceEEEEeCCeeEECCCCCCCCCHhHHHHHHcCCCEEE
Q 014853 374 VANCGDSRAVLCRGKEPMVLSVDHKVKKVLLFCHLCPTGMKAC 416 (417)
Q Consensus 374 VANvGDSRAVL~r~g~a~~LT~DHkp~~~~Er~RI~~aGG~V~ 416 (417)
|||||||||||+|++++++||+||+|.++.|++||+++||.|.
T Consensus 182 vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v~ 224 (365)
T PLN03145 182 VANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVY 224 (365)
T ss_pred EEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCcee
Confidence 9999999999999999999999999999999999999999874
No 3
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-30 Score=258.81 Aligned_cols=162 Identities=37% Similarity=0.531 Sum_probs=135.3
Q ss_pred ecccceEEEEccccCCCCCcccEEEecCccccchhhccccccccCCccccCCCCceEEEEEcCCCCcHHHHHHHHHHHHH
Q 014853 211 VDCIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLA 290 (417)
Q Consensus 211 ~~~~~~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~~g~~~~~~~~~~~ffgVfDGHGG~~aAe~as~~L~~~ 290 (417)
......++.++.+|+|+.|||++...+.+...+. + .....+||||||||||+.+|+||+++|+..
T Consensus 36 ~~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~----~-----------~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~ 100 (330)
T KOG0698|consen 36 NESYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDV----G-----------GEQDTAFFGVFDGHGGDLAAKFAAKHLHKN 100 (330)
T ss_pred cccccceEEEecCCCCCccCcceeeccccccccc----C-----------CCCceEEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3444566778999999999999999887653221 0 112689999999999999999999999999
Q ss_pred HHHHHhhhhccCCccccccchhhHHHHHHHHHHH-HHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeeeC
Q 014853 291 LAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFL-KVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCS 369 (417)
Q Consensus 291 L~~~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~-~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~~ 369 (417)
|.+++...... ..++.+++++|. ++|.++.... .....+|+||+++++.+
T Consensus 101 l~~~~~~~~~~-----------~~~~~a~~~~F~~~~D~~~~~~~------------------~~~~~~gstav~~vi~~ 151 (330)
T KOG0698|consen 101 LLEQLAFPKDR-----------QDVKDALRRAFLTKTDSEFLEKR------------------EDNRSGGSTAVVALIKK 151 (330)
T ss_pred HHhhhhcccch-----------HHHHHHHHHHHHHHHHHHHHhhc------------------cCCCCCcceeeeeeEec
Confidence 99987664321 568999999999 6999998641 11357899999999985
Q ss_pred C-eEEEEEeCcceEEEEeCC-eeEECCCCCCCCCHhHHHHHHcCCCEEE
Q 014853 370 S-HIIVANCGDSRAVLCRGK-EPMVLSVDHKVKKVLLFCHLCPTGMKAC 416 (417)
Q Consensus 370 ~-~L~VANvGDSRAVL~r~g-~a~~LT~DHkp~~~~Er~RI~~aGG~V~ 416 (417)
. +|||||+||||||||++| .+++||.||+|++++|+.||+++||+|.
T Consensus 152 ~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~ 200 (330)
T KOG0698|consen 152 GRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVS 200 (330)
T ss_pred CCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEE
Confidence 5 999999999999999865 8999999999999999999999999996
No 4
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=99.96 E-value=1.8e-29 Score=243.58 Aligned_cols=155 Identities=33% Similarity=0.494 Sum_probs=128.1
Q ss_pred EEEEccccCCCCCcccEEEecCccccchhhccccccccCCccccCCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHh
Q 014853 217 WGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEEIG 296 (417)
Q Consensus 217 ~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~~g~~~~~~~~~~~ffgVfDGHGG~~aAe~as~~L~~~L~~~l~ 296 (417)
||+.+.+|+|++|||++.+..++... ....+..||||||||||..+|+|++++|+..|.+.+.
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~~~~-----------------~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~ 64 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNFNSN-----------------SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLS 64 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEETCC-----------------TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCeecCCCCCCcccCEEEEecCcccc-----------------CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcc
Confidence 68999999999999999998876321 1223789999999999999999999999988888766
Q ss_pred hhhccCCccccccchhhHHHHHHHHHHHH-HHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeeeCCeEEEE
Q 014853 297 IIKNNLTDESTKVTRQGQWEKTFTSCFLK-VDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVA 375 (417)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~i~~aL~~aF~~-iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~~~~L~VA 375 (417)
.... ..+.++|..+|.+ +|..+.... ... ....+||||++++|.+++||||
T Consensus 65 ~~~~------------~~~~~al~~a~~~~~~~~~~~~~---------------~~~-~~~~~GsTa~v~li~~~~l~va 116 (254)
T PF00481_consen 65 FNDG------------NDIEEALRQAFLAFTDESLYSDS---------------ENN-ESSKSGSTATVALIDGNKLYVA 116 (254)
T ss_dssp HHTC------------HHHHHHHHHHHHHHHHHHHHHHH---------------HHH-THTTSEEEEEEEEEETTEEEEE
T ss_pred cccc------------cchhhcccceeeecccccccccc---------------ccc-ccccccccccccccccceeEEE
Confidence 5432 2688999999999 888887632 011 3468999999999999999999
Q ss_pred EeCcceEEEEeCCeeE-ECCCCCCCCCHhHHHHHHcCCCEEE
Q 014853 376 NCGDSRAVLCRGKEPM-VLSVDHKVKKVLLFCHLCPTGMKAC 416 (417)
Q Consensus 376 NvGDSRAVL~r~g~a~-~LT~DHkp~~~~Er~RI~~aGG~V~ 416 (417)
|||||||||++.+... +||+||+|+++.|++||+++||.|.
T Consensus 117 nvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~ 158 (254)
T PF00481_consen 117 NVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVS 158 (254)
T ss_dssp EESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEE
T ss_pred eeeeeeeeeeeccccccccccccccchhhccceeeccccccc
Confidence 9999999999999988 9999999999999999999999885
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=99.95 E-value=7e-27 Score=238.74 Aligned_cols=143 Identities=27% Similarity=0.351 Sum_probs=118.4
Q ss_pred ccceEEEEccccCCCCCcccEEEecCccccchhhccccccccCCccccCCCCceEEEEEcCCCCcHHHHHHHHHHHHHHH
Q 014853 213 CIPLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALA 292 (417)
Q Consensus 213 ~~~~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~~g~~~~~~~~~~~ffgVfDGHGG~~aAe~as~~L~~~L~ 292 (417)
....+|+++++|+|++|||++++... ....||||||||||..+|+|++++|+..|.
T Consensus 20 ~~~~~g~~s~~G~R~~nED~~~v~~~------------------------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~ 75 (381)
T PTZ00224 20 SIFRCASACVNGYRESMEDAHLLYLT------------------------DDWGFFGVFDGHVNDECSQYLARAWPQALE 75 (381)
T ss_pred ccEEEEEEeCCCCCCCCCCeeEeccC------------------------CCceEEEEEeCCCcHHHHHHHHHHHHHHHH
Confidence 34568999999999999999876421 135799999999999999999999997764
Q ss_pred HHHhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeee-CCe
Q 014853 293 EEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVC-SSH 371 (417)
Q Consensus 293 ~~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~-~~~ 371 (417)
+.... ...+.|.++|..+|.++.+.. ..+|||+++++|. +.+
T Consensus 76 ~~~~~----------------~~~~~l~~a~~~~d~~i~~~~---------------------~~~GsTatv~lI~~~~~ 118 (381)
T PTZ00224 76 KEPEP----------------MTDERMEELCLEIDEEWMDSG---------------------REGGSTGTFCVIMKDVH 118 (381)
T ss_pred hcccc----------------ccHHHHHHHHHHHHHHHHhcc---------------------cCCCCeEEEEEEEECCE
Confidence 32110 012357889999999998543 1369999999886 579
Q ss_pred EEEEEeCcceEEEEeCCeeEECCCCCCCCCHhHHHHHHcCCCEEE
Q 014853 372 IIVANCGDSRAVLCRGKEPMVLSVDHKVKKVLLFCHLCPTGMKAC 416 (417)
Q Consensus 372 L~VANvGDSRAVL~r~g~a~~LT~DHkp~~~~Er~RI~~aGG~V~ 416 (417)
+||||||||||||+|+|++++||+||+|.++.|+.||+++||.|.
T Consensus 119 l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~ 163 (381)
T PTZ00224 119 LQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVV 163 (381)
T ss_pred EEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEec
Confidence 999999999999999999999999999999999999999999874
No 6
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-26 Score=229.02 Aligned_cols=61 Identities=41% Similarity=0.547 Sum_probs=59.7
Q ss_pred CCcceEEEeeeeCCeEEEEEeCcceEEEEeCCeeEECCCCCCCCCHhHHHHHHcCCCEEEC
Q 014853 357 TVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMVLSVDHKVKKVLLFCHLCPTGMKACL 417 (417)
Q Consensus 357 ~sGSTAvValI~~~~L~VANvGDSRAVL~r~g~a~~LT~DHkp~~~~Er~RI~~aGG~V~~ 417 (417)
.+||||+||||.+++|||||.|||||||+|.|+++.||.||+|.++.|..||.+|||+|++
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtl 389 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTL 389 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEee
Confidence 6899999999999999999999999999999999999999999999999999999999985
No 7
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.92 E-value=1e-24 Score=212.88 Aligned_cols=152 Identities=28% Similarity=0.291 Sum_probs=124.3
Q ss_pred EEEEccccC-CCCCcccEEEecCccccchhhccccccccCCccccCCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHH
Q 014853 217 WGSVSIRGR-RPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEEI 295 (417)
Q Consensus 217 ~G~~S~~G~-R~~mEDa~~v~~~~~~~p~~~l~g~~~~~g~~~~~~~~~~~ffgVfDGHGG~~aAe~as~~L~~~L~~~l 295 (417)
++..+..|. |.+|||++.+.++.. ... ..||+|||||||++++++|++.+++.|.+.+
T Consensus 10 ~~~~s~~g~~R~~NeD~~~~~~~~~--------------------~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~ 68 (262)
T COG0631 10 VAGLSDVGTVRKHNEDAFLIKPNEN--------------------GNL-LLLFAVADGMGGHAAGEVASKLAVEALARLF 68 (262)
T ss_pred eeeeccCCCccCCCCcceeeccccC--------------------Ccc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHH
Confidence 345555555 899999999876321 122 6799999999999999999999999999988
Q ss_pred hhhhccCCccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeeeCCeEEEE
Q 014853 296 GIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVA 375 (417)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~~~~L~VA 375 (417)
........ .+.+.+.+...|..++.++.... ........+|||++++++.++++|+|
T Consensus 69 ~~~~~~~~--------~~~~~~~l~~~~~~~n~~i~~~~---------------~~~~~~~~mgtTl~~~~~~~~~l~~a 125 (262)
T COG0631 69 DETNFNSL--------NESLEELLKEAILKANEAIAEEG---------------QLNEDVRGMGTTLVLLLIRGNKLYVA 125 (262)
T ss_pred Hhcccccc--------chhHHHHHHHHHHHHHHHHHHhh---------------hcccccCCCceeEEEEEEECCeEEEE
Confidence 76543211 11178899999999999999765 12344678999999999999999999
Q ss_pred EeCcceEEEEeCCeeEECCCCCCCCCHhHHHHHHcCC
Q 014853 376 NCGDSRAVLCRGKEPMVLSVDHKVKKVLLFCHLCPTG 412 (417)
Q Consensus 376 NvGDSRAVL~r~g~a~~LT~DHkp~~~~Er~RI~~aG 412 (417)
|||||||||+|++++++||+||++.+..|+.|+...+
T Consensus 126 ~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~ 162 (262)
T COG0631 126 NVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPE 162 (262)
T ss_pred EccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHH
Confidence 9999999999999999999999999999999966543
No 8
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=99.89 E-value=5.6e-23 Score=206.75 Aligned_cols=139 Identities=24% Similarity=0.337 Sum_probs=110.6
Q ss_pred CCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhhhhccCCc---cc-----------------cccchhhHHHHHHHH
Q 014853 262 GLTSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTD---ES-----------------TKVTRQGQWEKTFTS 321 (417)
Q Consensus 262 ~~~~~ffgVfDGHGG~~aAe~as~~L~~~L~~~l~~~~~~~~~---~~-----------------~~~~~~~~i~~aL~~ 321 (417)
+..+.||||||||||+++++|++++|+.++..++......... .. ........+.++|.+
T Consensus 96 ~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~ 175 (390)
T KOG0700|consen 96 ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSK 175 (390)
T ss_pred cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHH
Confidence 4579999999999999999999999999999777663322110 00 000115778999999
Q ss_pred HHHHHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeeeCCeEEEEEeCcceEEEEe---CC---eeEECCC
Q 014853 322 CFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCR---GK---EPMVLSV 395 (417)
Q Consensus 322 aF~~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~~~~L~VANvGDSRAVL~r---~g---~a~~LT~ 395 (417)
||.++|++|........ ........+||||+|+++++..|||||+|||||||++ ++ .++|||+
T Consensus 176 Af~~tee~fl~~v~~~~-----------~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~ 244 (390)
T KOG0700|consen 176 AFEATEEDFLEMVDKQL-----------QENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLST 244 (390)
T ss_pred HHHHHHHHHHHHHHHhh-----------ccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecCh
Confidence 99999999987663221 2233447899999999999999999999999999985 22 5899999
Q ss_pred CCCCCCHhHHHHHHcC
Q 014853 396 DHKVKKVLLFCHLCPT 411 (417)
Q Consensus 396 DHkp~~~~Er~RI~~a 411 (417)
||+.++++|++||+..
T Consensus 245 dHn~~ne~Ev~Rir~e 260 (390)
T KOG0700|consen 245 DHNASNEDEVRRIRSE 260 (390)
T ss_pred hhccccHHHHHHHHHh
Confidence 9999999999999864
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.88 E-value=1.9e-21 Score=184.03 Aligned_cols=155 Identities=34% Similarity=0.465 Sum_probs=129.9
Q ss_pred eEEEEccccCCCCCcccEEEecCccccchhhccccccccCCccccCCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHH
Q 014853 216 LWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEEI 295 (417)
Q Consensus 216 ~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~~g~~~~~~~~~~~ffgVfDGHGG~~aAe~as~~L~~~L~~~l 295 (417)
.+++.+.+|+|+.|||++.+..... ..++.+|+|+|||||+..++++++.+...|.+.+
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~---------------------~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~ 60 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLN---------------------NEDGGLFGVFDGHGGHAAGEFASKLLVEELLEEL 60 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCC---------------------CCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHH
Confidence 3578888999999999998764321 0257899999999999999999999999998876
Q ss_pred hhhhccCCccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeeeCCeEEEE
Q 014853 296 GIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVA 375 (417)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~~~~L~VA 375 (417)
..... .....+...|.++|.+++..+...... ......+|||++++++.+++++++
T Consensus 61 ~~~~~---------~~~~~~~~~l~~~~~~~~~~l~~~~~~---------------~~~~~~~gtT~~~~~~~~~~l~~~ 116 (254)
T cd00143 61 EETLT---------LSEEDIEEALRKAFLRADEEILEEAQD---------------EPDDARSGTTAVVALIRGNKLYVA 116 (254)
T ss_pred hhccc---------cchHHHHHHHHHHHHHHHHHHHHhhhh---------------ccCCCCCCCcEEEEEEECCEEEEE
Confidence 54321 224678889999999999999875411 123457899999999999999999
Q ss_pred EeCcceEEEEeCCeeEECCCCCCCCCHhHHHHHHcCCCEE
Q 014853 376 NCGDSRAVLCRGKEPMVLSVDHKVKKVLLFCHLCPTGMKA 415 (417)
Q Consensus 376 NvGDSRAVL~r~g~a~~LT~DHkp~~~~Er~RI~~aGG~V 415 (417)
|+||||+|++|+++.+++|.||++.++.|+.||...+|++
T Consensus 117 ~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~ 156 (254)
T cd00143 117 NVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRV 156 (254)
T ss_pred EecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcE
Confidence 9999999999999999999999999999999999999863
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.87 E-value=6.1e-21 Score=181.51 Aligned_cols=153 Identities=38% Similarity=0.529 Sum_probs=127.1
Q ss_pred eEEEEccccCCCCCcccEEEecCccccchhhccccccccCCccccCCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHH
Q 014853 216 LWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEEI 295 (417)
Q Consensus 216 ~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~~g~~~~~~~~~~~ffgVfDGHGG~~aAe~as~~L~~~L~~~l 295 (417)
.+|+.+.+|+|..|||++.+...+. ....+|+|||||||+.+|+++++.+...+.+..
T Consensus 7 ~~~~~~~~~~r~~neD~~~~~~~~~----------------------~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~ 64 (255)
T smart00332 7 RYGLSSMQGVRKPMEDAHVITPDLS----------------------DSGAFFGVFDGHGGSEAAKFLSKNLPEILAEEL 64 (255)
T ss_pred eEEEecCCCCCCCCcceEEEeccCC----------------------CCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhH
Confidence 4577888899999999998764320 257899999999999999999999998887654
Q ss_pred hhhhccCCccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeeeCCeEEEE
Q 014853 296 GIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVA 375 (417)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~~~~L~VA 375 (417)
..... ....+.+.|.++|.+++.++...... ......+|||++++++.++++|++
T Consensus 65 ~~~~~----------~~~~~~~~l~~~~~~~~~~~~~~~~~---------------~~~~~~~gtT~~~~~~~~~~l~~~ 119 (255)
T smart00332 65 IKHKD----------ELEDVEEALRKAFLKTDEEILEELES---------------LEEDAGSGSTAVVALISGNKLYVA 119 (255)
T ss_pred hhccc----------chhHHHHHHHHHHHHHHHHHHHhhhh---------------ccCCCCCCccEEEEEEECCEEEEE
Confidence 33211 11457888999999999999876511 113357999999999999999999
Q ss_pred EeCcceEEEEeCCeeEECCCCCCCCCHhHHHHHHcCCCEE
Q 014853 376 NCGDSRAVLCRGKEPMVLSVDHKVKKVLLFCHLCPTGMKA 415 (417)
Q Consensus 376 NvGDSRAVL~r~g~a~~LT~DHkp~~~~Er~RI~~aGG~V 415 (417)
|+||||+|++|+++..+||.||++.++.|+.||...|+.|
T Consensus 120 ~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~ 159 (255)
T smart00332 120 NVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFV 159 (255)
T ss_pred eccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEE
Confidence 9999999999999999999999999999999999999876
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.85 E-value=1.5e-20 Score=202.77 Aligned_cols=152 Identities=23% Similarity=0.202 Sum_probs=108.9
Q ss_pred eEEEEccccC-CCCCcccEEEecCccccchhhccccccccCCccccCCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHH
Q 014853 216 LWGSVSIRGR-RPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEE 294 (417)
Q Consensus 216 ~~G~~S~~G~-R~~mEDa~~v~~~~~~~p~~~l~g~~~~~g~~~~~~~~~~~ffgVfDGHGG~~aAe~as~~L~~~L~~~ 294 (417)
.++..+++|+ |++|||++.+..++..... +.+ .......||+|||||||+.+++.|++...+.|.+.
T Consensus 376 ~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~--------~~~----~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~ 443 (645)
T PRK14559 376 EDAGRTDVGRQRHHNEDYFGINTRIQKLEN--------PHG----RIVQARGLYILCDGMGGHAAGEVASALAVETLQQY 443 (645)
T ss_pred EEEEECCCCCCCcccCCccccccccccccc--------ccc----cccccceEEEEEeCCCCchhHHHHHHHHHHHHHHH
Confidence 4688899997 9999999876543211000 000 00013579999999999999988888888887765
Q ss_pred HhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeeeCCeEEE
Q 014853 295 IGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIV 374 (417)
Q Consensus 295 l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~~~~L~V 374 (417)
+...... . ...++.++++|.++|..|.....+ ........||||++++++.++++||
T Consensus 444 ~~~~~~~-------~---~~~~~~L~~ai~~AN~~I~~~~~~-------------~~~~~~~~MGTTlv~alI~~~~l~i 500 (645)
T PRK14559 444 FQQHWQD-------E---LPDEETIREAIYLANEAIYDLNQQ-------------NARSGSGRMGTTLVMALVQDTQVAV 500 (645)
T ss_pred HHhhhcc-------c---ccHHHHHHHHHHHHHHHHHHHhhh-------------cccccCCCCCceeeeEEEECCEEEE
Confidence 5432110 0 012467888999999999765411 0011234699999999999999999
Q ss_pred EEeCcceEEEE-eCCeeEECCCCCCCCCH
Q 014853 375 ANCGDSRAVLC-RGKEPMVLSVDHKVKKV 402 (417)
Q Consensus 375 ANvGDSRAVL~-r~g~a~~LT~DHkp~~~ 402 (417)
+||||||+|++ |+|++++||+||++...
T Consensus 501 anVGDSRaYli~r~g~l~QLT~DHs~~~~ 529 (645)
T PRK14559 501 AHVGDSRLYRVTRKGGLEQLTVDHEVGQR 529 (645)
T ss_pred EEecCceEEEEecCCeEEEeCCCCCHHHH
Confidence 99999999987 57899999999998754
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.75 E-value=1.2e-17 Score=164.29 Aligned_cols=132 Identities=25% Similarity=0.332 Sum_probs=108.0
Q ss_pred CCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhhhhccCCccc------c--------------------ccchhhHH
Q 014853 262 GLTSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDES------T--------------------KVTRQGQW 315 (417)
Q Consensus 262 ~~~~~ffgVfDGHGG~~aAe~as~~L~~~L~~~l~~~~~~~~~~~------~--------------------~~~~~~~i 315 (417)
..+.++|.+||||.|+.+|-.+++.+++.+.+++..+...+.+.+ + ....+..+
T Consensus 141 ~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LV 220 (493)
T KOG1323|consen 141 RADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLV 220 (493)
T ss_pred CCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhh
Confidence 347899999999999999999999999999998876544321110 0 01124567
Q ss_pred HHHHHHHHHHHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeeeCCeEEEEEeCcceEEEEeCCeeEECCC
Q 014853 316 EKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMVLSV 395 (417)
Q Consensus 316 ~~aL~~aF~~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~~~~L~VANvGDSRAVL~r~g~a~~LT~ 395 (417)
..+|..||+.+|++|.... .......||||+++++.-.+|||||.|||||+|.|++++++||+
T Consensus 221 iGAlEsAFqemDeqiarer-----------------~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~ 283 (493)
T KOG1323|consen 221 IGALESAFQEMDEQIARER-----------------QVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSK 283 (493)
T ss_pred HHHHHHHHHHHHHHHHHHH-----------------HhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeeccc
Confidence 8899999999999998654 12234689999999999999999999999999999999999999
Q ss_pred CCCCCCHhHHHHHHcCC
Q 014853 396 DHKVKKVLLFCHLCPTG 412 (417)
Q Consensus 396 DHkp~~~~Er~RI~~aG 412 (417)
+.+|. .||+||+..+
T Consensus 284 efTPe--tERqRlQ~La 298 (493)
T KOG1323|consen 284 EFTPE--TERQRLQELA 298 (493)
T ss_pred ccCcH--HHHHHHHHHh
Confidence 99995 6999998753
No 13
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.41 E-value=3.1e-12 Score=119.39 Aligned_cols=136 Identities=18% Similarity=0.179 Sum_probs=80.3
Q ss_pred EccccCCCCCcccEEEecCccccchhhccccccccCCccccCCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhhhh
Q 014853 220 VSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIK 299 (417)
Q Consensus 220 ~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~~g~~~~~~~~~~~ffgVfDGHGG~~aAe~as~~L~~~L~~~l~~~~ 299 (417)
.+++|+|..|||++.+... .+..|++|+||+||...++.+++.+...+.+.+....
T Consensus 3 ~sh~~~~~~nqD~~~~~~~------------------------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~ 58 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD------------------------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLL 58 (212)
T ss_dssp ----TTSSS--EEEEEE-T------------------------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSC
T ss_pred ccccCCCCCCCCCEEeeeC------------------------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcc
Confidence 4678999999999985422 1467779999999999999999999988888776654
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeeeCCeEEEEEeCc
Q 014853 300 NNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCSSHIIVANCGD 379 (417)
Q Consensus 300 ~~~~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~~~~L~VANvGD 379 (417)
.. ......+..++.....+...+..... ...........+||++++++.++.++++|+||
T Consensus 59 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD 118 (212)
T PF13672_consen 59 SQ--------ESPSSIEALIRAIKKEILSIVRAFQS------------AKQADLELRDYGTTLLALVIDPDKVYIFNIGD 118 (212)
T ss_dssp CC--------HHHHHHHHHHHHHHHHHHHHH----H------------HHHHSGGGTT-EE-EEEEEEETTEEEEEEESS
T ss_pred cc--------cchHHHHHHHHHHHHHHHHHhhhhhh------------hhhccccccccCceEEEEEEECCEEEEEEECC
Confidence 21 11110222222222222222100000 00011224567999999999999999999999
Q ss_pred ceEE-EEeCCeeEECCCCCCC
Q 014853 380 SRAV-LCRGKEPMVLSVDHKV 399 (417)
Q Consensus 380 SRAV-L~r~g~a~~LT~DHkp 399 (417)
||+| +.++|+..+++.||+.
T Consensus 119 ~~i~~~~~~g~~~~l~~~~~~ 139 (212)
T PF13672_consen 119 SRIYVIRRNGEIQQLTDDHSG 139 (212)
T ss_dssp -EEEEEEETTEEEE-S---BH
T ss_pred CeEEEEECCCEEEEcCCCccc
Confidence 9996 5689999999999973
No 14
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=98.91 E-value=1.7e-08 Score=92.84 Aligned_cols=96 Identities=18% Similarity=0.109 Sum_probs=72.6
Q ss_pred CceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCcCCCCC
Q 014853 264 TSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDG 343 (417)
Q Consensus 264 ~~~ffgVfDGHGG~~aAe~as~~L~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~~~~~~ 343 (417)
...+|+|+||||+...|.+++..+...|.+.+... ..+...+.++|+.+....
T Consensus 29 ~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~------------------~~~~~~l~~~n~~l~~~~--------- 81 (193)
T smart00331 29 GRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG------------------ISLSQILERLNRAIYENG--------- 81 (193)
T ss_pred CeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC------------------CCHHHHHHHHHHHHHhcC---------
Confidence 46889999999999999999999988887654321 124445667777776432
Q ss_pred CChhhhhcccCCCCCcceEEEeee--eCCeEEEEEeCcceEEEEe-CCeeEECCCCC
Q 014853 344 DASEVIFEAVAPETVGSTAVVALV--CSSHIIVANCGDSRAVLCR-GKEPMVLSVDH 397 (417)
Q Consensus 344 ~ss~~~~~~~~~~~sGSTAvValI--~~~~L~VANvGDSRAVL~r-~g~a~~LT~DH 397 (417)
...+|+|++++++ ..++++++|+||+|+++++ ++..++++.+.
T Consensus 82 -----------~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~ 127 (193)
T smart00331 82 -----------EDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL 127 (193)
T ss_pred -----------CCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC
Confidence 2457999999998 5789999999999999998 55555555543
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.73 E-value=2e-08 Score=110.72 Aligned_cols=146 Identities=19% Similarity=0.333 Sum_probs=116.2
Q ss_pred ceEEEEccccCCCCCcccEEEecCccccchhhccccccccCCccccCCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHH
Q 014853 215 PLWGSVSIRGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEE 294 (417)
Q Consensus 215 ~~~G~~S~~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~~g~~~~~~~~~~~ffgVfDGHGG~~aAe~as~~L~~~L~~~ 294 (417)
..||++...|.|.+.--+...+.+|. ......||.|||-+-.....+++..+..+|.++
T Consensus 522 ~t~Gv~~~~gqrnk~c~~~~~v~nf~---------------------~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~ee 580 (1081)
T KOG0618|consen 522 WTYGVAGVSGQRNKVCSRAVWVENFF---------------------LNPQATFGCFDGSRNSRVLSLVQDTMASYLAEE 580 (1081)
T ss_pred eeeccchhcccccchhhhhhhhhhcc---------------------cCCcceEEEEcCCCchhHHHHHHHHHHHHHHHH
Confidence 34899999999988777766666654 125789999999999999999999999999999
Q ss_pred HhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeeeC-----
Q 014853 295 IGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVCS----- 369 (417)
Q Consensus 295 l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~~----- 369 (417)
++..... .+.++.+|+.+++++.... ..-|..++.+.|..
T Consensus 581 v~~~~~e--------------t~~mr~~fl~~~rklg~~g---------------------~~lg~~~~~~~i~~d~~~~ 625 (1081)
T KOG0618|consen 581 VQLYGNE--------------TEQMRNTFLRLNRKLGEEG---------------------QVLGGSVVLCQIVEDSLSP 625 (1081)
T ss_pred HHhccCh--------------HHHHHHHHHHHhhhhhhhh---------------------ccccchhhheeecccccCc
Confidence 8876432 2238899999999997654 23344444555432
Q ss_pred ---CeEEEEEeCcceEEEEeCCeeEECCCCC-CCCCHhHHHHHHcCCCEEE
Q 014853 370 ---SHIIVANCGDSRAVLCRGKEPMVLSVDH-KVKKVLLFCHLCPTGMKAC 416 (417)
Q Consensus 370 ---~~L~VANvGDSRAVL~r~g~a~~LT~DH-kp~~~~Er~RI~~aGG~V~ 416 (417)
.++++||+|+|.+|+|++|+.+++|+-. -..+++|.+||+..+|.|.
T Consensus 626 asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ 676 (1081)
T KOG0618|consen 626 ASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFIT 676 (1081)
T ss_pred ccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeec
Confidence 5789999999999999999999998776 4459999999999999985
No 16
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=98.73 E-value=4.8e-08 Score=96.76 Aligned_cols=98 Identities=18% Similarity=0.223 Sum_probs=65.9
Q ss_pred CceEEEEEcCCCCcH-----HHHHHHHHHHHHHHHHHhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCc
Q 014853 264 TSHFFGVYDGHGGSQ-----AANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSV 338 (417)
Q Consensus 264 ~~~ffgVfDGHGG~~-----aAe~as~~L~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~ 338 (417)
...+.||+||.||+. .+.|.+ .|+....+..+... +.. ......|.++|.++-.+ .
T Consensus 102 ~~~v~GVADGVGGWa~~GiDpg~fS~-eLM~~ce~~v~~~~-------~~~---~~P~~lL~~ay~~l~~~----~---- 162 (330)
T KOG1379|consen 102 HAIVMGVADGVGGWAEYGIDPGAFSR-ELMSNCERLVQNSD-------FNP---SDPVNLLEKAYAELKSQ----K---- 162 (330)
T ss_pred ccceEEEccccchHhhcCcCHHHHHH-HHHHHHHHHhcccc-------cCC---CChHHHHHHHHHHHhhc----C----
Confidence 578999999999875 444433 34444444332211 111 24566666666554221 1
Q ss_pred CCCCCCChhhhhcccCCCCCcceEEEeeee--CCeEEEEEeCcceEEEEeCCeeEECCC
Q 014853 339 NAGDGDASEVIFEAVAPETVGSTAVVALVC--SSHIIVANCGDSRAVLCRGKEPMVLSV 395 (417)
Q Consensus 339 ~~~~~~ss~~~~~~~~~~~sGSTAvValI~--~~~L~VANvGDSRAVL~r~g~a~~LT~ 395 (417)
.+.-.+|||+++++. +.+||+||+|||...+.|+|++++-|.
T Consensus 163 ---------------~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~ 206 (330)
T KOG1379|consen 163 ---------------VPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSP 206 (330)
T ss_pred ---------------CCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCc
Confidence 234588999999998 899999999999999999998766554
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=97.20 E-value=0.0055 Score=68.78 Aligned_cols=116 Identities=11% Similarity=0.030 Sum_probs=80.1
Q ss_pred ccCCCCCcccEEEecCccccchhhccccccccCCccccCCCCceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhhhhccC
Q 014853 223 RGRRPEMEDAVAVVPRFMKIPIRMLIGDRVIDGMSHCLNGLTSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNL 302 (417)
Q Consensus 223 ~G~R~~mEDa~~v~~~~~~~p~~~l~g~~~~~g~~~~~~~~~~~ffgVfDGHGG~~aAe~as~~L~~~L~~~l~~~~~~~ 302 (417)
++.+....|.+.+...- ....+++|.||+|....|...+......+.+.+..-.
T Consensus 561 k~g~~vsGD~y~~~~l~-----------------------~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~--- 614 (764)
T TIGR02865 561 KDGELVSGDSYSFGKLS-----------------------AGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGF--- 614 (764)
T ss_pred CCCCcccCceEEEEEEC-----------------------CCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCC---
Confidence 44577888988765321 1356899999999766666777777666654432110
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCcCCCCCCChhhhhcccCCCCCcceEEEeeee--CCeEEEEEeCcc
Q 014853 303 TDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDGDASEVIFEAVAPETVGSTAVVALVC--SSHIIVANCGDS 380 (417)
Q Consensus 303 ~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~~~~~~~ss~~~~~~~~~~~sGSTAvValI~--~~~L~VANvGDS 380 (417)
. ...++..+|..+.... ...+.+|+.+++++ .+++.++|+|++
T Consensus 615 -----------~----~~~ai~~lN~~L~~~~--------------------~~~~faTl~l~~IDl~~g~~~~~~aG~~ 659 (764)
T TIGR02865 615 -----------D----REVAIKTVNSILSLRS--------------------TDEKFSTLDLSVIDLYTGQAEFVKVGAV 659 (764)
T ss_pred -----------C----HHHHHHHHHHHHHhCC--------------------CCCeEEEEEEEEEECCCCeEEEEecCCC
Confidence 0 1345566777665322 12468999999985 688999999999
Q ss_pred eEEEEeCCeeEECCCCCCC
Q 014853 381 RAVLCRGKEPMVLSVDHKV 399 (417)
Q Consensus 381 RAVL~r~g~a~~LT~DHkp 399 (417)
+.++.|+++..+++..+-|
T Consensus 660 p~~i~r~~~v~~i~s~~lP 678 (764)
T TIGR02865 660 PSFIKRGAKVEVIRSSNLP 678 (764)
T ss_pred ceEEEECCEEEEecCCCce
Confidence 9999999988888766554
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=96.82 E-value=0.037 Score=50.38 Aligned_cols=95 Identities=18% Similarity=0.113 Sum_probs=64.6
Q ss_pred CceEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHhhhcCcCcCCCCC
Q 014853 264 TSHFFGVYDGHGGSQAANYCRERIHLALAEEIGIIKNNLTDESTKVTRQGQWEKTFTSCFLKVDDEIGGKAGRSVNAGDG 343 (417)
Q Consensus 264 ~~~ffgVfDGHGG~~aAe~as~~L~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~aL~~aF~~iD~el~~~~~~~~~~~~~ 343 (417)
...++.|.|+.|-.-.|.+.+-.+...+...+.... . ....+..+|+.+.....
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~--------------~----p~~~l~~ln~~l~~~~~-------- 56 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGL--------------D----PEELLEALNRRLYRDLK-------- 56 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTT--------------S----HHHHHHHHHHHHHHHTT--------
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCC--------------C----HHHHHHHHHHHHHHHhh--------
Confidence 467899999999666666666667767766543211 0 34455567777754330
Q ss_pred CChhhhhcccCCCCCcceEEEeeee--CCeEEEEEeCcceEEEEeC--CeeEECCC
Q 014853 344 DASEVIFEAVAPETVGSTAVVALVC--SSHIIVANCGDSRAVLCRG--KEPMVLSV 395 (417)
Q Consensus 344 ~ss~~~~~~~~~~~sGSTAvValI~--~~~L~VANvGDSRAVL~r~--g~a~~LT~ 395 (417)
.....+|++++++. .+.++++|+|+++++++|. +....+..
T Consensus 57 -----------~~~~~~t~~~~~~d~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~ 101 (193)
T PF07228_consen 57 -----------GDNRYATACYAIIDPETGTLTYANAGHPPPLLLRPGGREIEQLES 101 (193)
T ss_dssp -----------TTSTTEEEEEEEEETTTTEEEEEEESSSEEEEEETTCTEEEEETC
T ss_pred -----------hccccceEEEEEecccceEEEEeCCCCCCEEEEeccccceeeccc
Confidence 11367888888875 5689999999999999998 44444443
Done!