Query 014854
Match_columns 417
No_of_seqs 141 out of 293
Neff 6.2
Searched_HMMs 13730
Date Mon Mar 25 19:00:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014854.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014854hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1seta1 a.2.7.1 (A:1-110) Sery 55.5 27 0.002 26.2 8.4 57 266-323 41-97 (110)
2 d1uzka2 g.3.11.1 (A:1605-1647) 32.5 2.4 0.00018 27.4 -1.3 20 388-407 12-31 (43)
3 d1uzka1 g.3.11.1 (A:1486-1528) 31.9 3.3 0.00024 26.7 -0.7 18 389-406 12-29 (43)
4 d1ez3a_ a.47.2.1 (A:) Syntaxin 31.2 98 0.0071 23.1 8.4 30 293-322 48-77 (124)
5 d1emoa1 g.3.11.1 (A:2124-2166) 29.6 4.7 0.00034 26.0 -0.3 18 389-406 14-31 (43)
6 d1apqa_ g.3.11.1 (A:) Compleme 28.0 4.2 0.00031 27.3 -0.8 15 393-407 25-39 (53)
7 d1lmja1 g.3.11.1 (A:3-46) Fibr 27.0 4 0.00029 26.6 -1.0 21 387-407 11-31 (44)
8 d1lmja2 g.3.11.1 (A:47-88) Fib 26.6 4 0.00029 26.2 -1.0 21 387-407 10-30 (42)
9 d1lvfa_ a.47.2.1 (A:) Syntaxin 23.1 79 0.0058 23.5 6.1 27 295-321 40-66 (106)
10 d1szba2 g.3.11.1 (A:124-168) M 21.9 5 0.00036 26.0 -1.3 15 393-407 17-31 (45)
11 d1dx5i3 g.3.11.1 (I:423-462) T 21.1 5.3 0.00039 25.5 -1.3 21 387-408 9-29 (40)
12 d1u5ta1 a.4.5.54 (A:20-164) Va 20.4 26 0.0019 28.3 2.7 20 104-123 70-89 (145)
No 1
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=55.50 E-value=27 Score=26.22 Aligned_cols=57 Identities=18% Similarity=0.243 Sum_probs=32.7
Q ss_pred hhHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 014854 266 LNELEAVDGSVKKLYEVIQNEVDTVEEELLQKSVLDLGKRADNLSQGLDHLTKAVDGF 323 (417)
Q Consensus 266 l~Ele~Vdaav~~L~~~i~~~~~~e~~e~v~~~veeL~~~le~Le~gle~Le~~Vd~l 323 (417)
..+++.+.+--..+...|..+ ..++.+++...+.+|+..+..++..+..++.+++.+
T Consensus 41 ~~~~e~l~~~rN~~sk~i~k~-~~~~~~~l~~~~k~lk~~i~~le~~~~~~~~~l~~~ 97 (110)
T d1seta1 41 KKRLQEVQTERNQVAKRVPKA-PPEEKEALIARGKALGEEAKRLEEALREKEARLEAL 97 (110)
T ss_dssp HHHHHHHHHHHHHHHHHGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555544444444332 234445566667777777777777777766666554
No 2
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.46 E-value=2.4 Score=27.43 Aligned_cols=20 Identities=35% Similarity=0.981 Sum_probs=15.1
Q ss_pred Ccceehhhhhhhhhhhhccc
Q 014854 388 ACYGVHCVNLLGFLRCSCLC 407 (417)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~ 407 (417)
.|..-.|+|..|..+|+|.=
T Consensus 12 ~c~~~~C~Nt~Gsy~C~C~~ 31 (43)
T d1uzka2 12 LCQGGKCINTFGSFQCRCPT 31 (43)
T ss_dssp GGBTSEEEECSSCEEEECCT
T ss_pred CcCCCEEECCCCCeEeECCC
Confidence 34333699999999998853
No 3
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.86 E-value=3.3 Score=26.65 Aligned_cols=18 Identities=39% Similarity=0.866 Sum_probs=14.4
Q ss_pred cceehhhhhhhhhhhhcc
Q 014854 389 CYGVHCVNLLGFLRCSCL 406 (417)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~ 406 (417)
|-.-.|+|..|..+|+|.
T Consensus 12 ~c~~~C~Nt~G~y~C~C~ 29 (43)
T d1uzka1 12 CISGNCVNTPGSYICDCP 29 (43)
T ss_dssp SBTSEEEEETTEEEEECC
T ss_pred CcCCEeECCCCCEEEecC
Confidence 333479999999999985
No 4
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=31.21 E-value=98 Score=23.12 Aligned_cols=30 Identities=20% Similarity=0.390 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHhH
Q 014854 293 ELLQKSVLDLGKRADNLSQGLDHLTKAVDG 322 (417)
Q Consensus 293 e~v~~~veeL~~~le~Le~gle~Le~~Vd~ 322 (417)
..+...+.++++....+...|+.|+..++.
T Consensus 48 ~~l~~~~~~i~~~a~~ik~~Lk~l~~~~~~ 77 (124)
T d1ez3a_ 48 EELEELMSDIKKTANKVRSKLKSIEQSIEQ 77 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445666777777777777777777766543
No 5
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.61 E-value=4.7 Score=26.00 Aligned_cols=18 Identities=39% Similarity=0.896 Sum_probs=14.9
Q ss_pred cceehhhhhhhhhhhhcc
Q 014854 389 CYGVHCVNLLGFLRCSCL 406 (417)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~ 406 (417)
|..-+|+|..|..+|.|.
T Consensus 14 ~~~~~C~Nt~Gsy~C~C~ 31 (43)
T d1emoa1 14 CKHGQCINTDGSYRCECP 31 (43)
T ss_dssp CSSSCCCCCSSCCCCCCC
T ss_pred CCCCEeECCCCCeEeECC
Confidence 345679999999999885
No 6
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.05 E-value=4.2 Score=27.26 Aligned_cols=15 Identities=40% Similarity=0.695 Sum_probs=13.0
Q ss_pred hhhhhhhhhhhhccc
Q 014854 393 HCVNLLGFLRCSCLC 407 (417)
Q Consensus 393 ~~~~~~~~~~~~~~~ 407 (417)
.|+|..|..+|+|.=
T Consensus 25 ~C~Nt~GsY~C~C~~ 39 (53)
T d1apqa_ 25 LCHNYVGGYFCSCRP 39 (53)
T ss_dssp EEEEETTEEEEECST
T ss_pred EeEcCCCCeEeECCC
Confidence 399999999999863
No 7
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.01 E-value=4 Score=26.59 Aligned_cols=21 Identities=33% Similarity=0.607 Sum_probs=16.1
Q ss_pred CCcceehhhhhhhhhhhhccc
Q 014854 387 PACYGVHCVNLLGFLRCSCLC 407 (417)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~ 407 (417)
+.|..-.|+|..|..+|.|.=
T Consensus 11 ~~C~~~~C~Nt~Gsy~C~C~~ 31 (44)
T d1lmja1 11 DLCGRGQCVNTPGDFECKCDE 31 (44)
T ss_dssp STTTTSCEEEETTEEEECCCS
T ss_pred CCCCCCEeEcCCCCeEEeCCC
Confidence 345544699999999998753
No 8
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.59 E-value=4 Score=26.17 Aligned_cols=21 Identities=38% Similarity=0.683 Sum_probs=16.1
Q ss_pred CCcceehhhhhhhhhhhhccc
Q 014854 387 PACYGVHCVNLLGFLRCSCLC 407 (417)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~ 407 (417)
..|..-.|+|..|..+|+|.=
T Consensus 10 ~~C~~~~C~Nt~Gsy~C~C~~ 30 (42)
T d1lmja2 10 LLCRGGVCHNTEGSYRCECPP 30 (42)
T ss_dssp STTTTSEEEEETTEEEEESCT
T ss_pred CCCCCCEeECCCCCeEEeCCC
Confidence 345544799999999998753
No 9
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.15 E-value=79 Score=23.47 Aligned_cols=27 Identities=11% Similarity=0.271 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHh
Q 014854 295 LQKSVLDLGKRADNLSQGLDHLTKAVD 321 (417)
Q Consensus 295 v~~~veeL~~~le~Le~gle~Le~~Vd 321 (417)
+...-.+|+..|+.++.-|++|++-|.
T Consensus 40 ~~~~~~eL~~~l~siewdL~dLe~av~ 66 (106)
T d1lvfa_ 40 IDWTTNELRNNLRSIEWDLEDLDETIS 66 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 456677777777777777777777766
No 10
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.91 E-value=5 Score=26.03 Aligned_cols=15 Identities=53% Similarity=1.032 Sum_probs=13.0
Q ss_pred hhhhhhhhhhhhccc
Q 014854 393 HCVNLLGFLRCSCLC 407 (417)
Q Consensus 393 ~~~~~~~~~~~~~~~ 407 (417)
.|+|..|..+|+|.=
T Consensus 17 ~C~Nt~Gsy~C~C~~ 31 (45)
T d1szba2 17 HCHNHLGGFYCSCRA 31 (45)
T ss_dssp EEEEETTEEEEECCT
T ss_pred CCccCCCCeEEECCC
Confidence 599999999998853
No 11
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.12 E-value=5.3 Score=25.52 Aligned_cols=21 Identities=38% Similarity=0.722 Sum_probs=16.4
Q ss_pred CCcceehhhhhhhhhhhhcccc
Q 014854 387 PACYGVHCVNLLGFLRCSCLCR 408 (417)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~ 408 (417)
..|+. -|+|..|..+|+|.=.
T Consensus 9 ~~C~~-~C~N~~Gsy~C~C~~G 29 (40)
T d1dx5i3 9 GFCSG-VCHNLPGTFECICGPD 29 (40)
T ss_dssp SSCSS-EEEECSSSEEEEECSS
T ss_pred cCccC-EeeCCCCCeEeECCCC
Confidence 34764 5999999999998643
No 12
>d1u5ta1 a.4.5.54 (A:20-164) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.40 E-value=26 Score=28.29 Aligned_cols=20 Identities=20% Similarity=0.615 Sum_probs=17.9
Q ss_pred HHHHHhhhhhHHhhhhHHHH
Q 014854 104 IDVYLDISVNLLDICIAFSS 123 (417)
Q Consensus 104 VdeyLD~SlkLLDvCna~kd 123 (417)
=|=|.+=++++.|+|-++++
T Consensus 70 gDFYyEL~VqIvEvC~~tr~ 89 (145)
T d1u5ta1 70 NDFYYEVCLKVIEICRQTKD 89 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHHHHhhh
Confidence 47799999999999999985
Done!