Query 014857
Match_columns 417
No_of_seqs 130 out of 690
Neff 5.0
Searched_HMMs 13730
Date Mon Mar 25 19:03:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014857.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014857hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axtt1 f.23.34.1 (T:1-30) Pho 5.8 3E+02 0.022 16.2 3.4 20 393-412 4-23 (30)
2 d1x3ha2 g.39.1.3 (A:43-74) Leu 4.5 1.4E+02 0.0099 18.4 1.1 16 347-362 7-22 (32)
3 d1q25a2 b.64.1.1 (A:130-280) C 4.2 1.4E+02 0.01 23.0 1.2 19 353-371 8-26 (151)
4 d1lghb_ f.3.1.1 (B:) Light-har 4.1 3.6E+02 0.026 17.4 3.1 17 398-415 24-40 (43)
5 d1qk7a_ g.3.6.2 (A:) Lectin SH 4.0 1.7E+02 0.013 17.6 1.3 12 132-143 21-32 (32)
6 d1wmaa1 c.2.1.2 (A:2-276) Carb 3.8 1.1E+02 0.0083 25.7 0.4 8 359-366 131-138 (275)
7 d1m0ka_ f.13.1.1 (A:) Bacterio 3.6 1.2E+02 0.0087 25.8 0.3 50 315-370 163-212 (227)
8 d1uaza_ f.13.1.1 (A:) Archaerh 3.4 1.2E+02 0.0091 25.8 0.3 25 317-341 175-199 (236)
9 d1dt9a2 d.79.3.2 (A:277-422) C 3.4 1.2E+02 0.0088 24.1 0.2 7 197-203 132-138 (146)
10 d1lnsa1 a.40.2.1 (A:1-145) X-P 3.1 2E+02 0.015 23.0 1.4 25 173-197 61-85 (145)
No 1
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=5.76 E-value=3e+02 Score=16.16 Aligned_cols=20 Identities=30% Similarity=0.441 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 014857 393 TTYGLGFAALTATIVHVALF 412 (417)
Q Consensus 393 l~y~~~fA~~ta~i~h~~L~ 412 (417)
++|.+-||++.+.+...+.|
T Consensus 4 i~yv~ifac~i~lfffaiff 23 (30)
T d2axtt1 4 ITYVFIFACIIALFFFAIFF 23 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred eehHHHHHHHHHHHHHHHHh
Confidence 57788899998887776655
No 2
>d1x3ha2 g.39.1.3 (A:43-74) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.46 E-value=1.4e+02 Score=18.39 Aligned_cols=16 Identities=19% Similarity=0.453 Sum_probs=13.4
Q ss_pred ccCcchhccccCCcee
Q 014857 347 FPIFSDQLFTTTGREY 362 (417)
Q Consensus 347 ~Pi~S~~lfd~~G~~Y 362 (417)
-||.+.+-|..+|++|
T Consensus 7 ~PF~~~~Fy~~~g~Py 22 (32)
T d1x3ha2 7 TSFSTGSFFELDGRPF 22 (32)
T ss_dssp CBSCSSCCEESSSCEE
T ss_pred CcCCCCCeEeECCccc
Confidence 4888888888889887
No 3
>d1q25a2 b.64.1.1 (A:130-280) Cation-independent mannose-6-phosphate receptor (MIR-receptor) {Cow (Bos taurus) [TaxId: 9913]}
Probab=4.18 E-value=1.4e+02 Score=23.03 Aligned_cols=19 Identities=11% Similarity=0.293 Sum_probs=14.6
Q ss_pred hccccCCceeecceeeCCC
Q 014857 353 QLFTTTGREYNITAIIDSN 371 (417)
Q Consensus 353 ~lfd~~G~~Ynvs~Il~~d 371 (417)
.++|.+|+.||.+.+.+.+
T Consensus 8 ~v~d~~g~~fDLspL~~~~ 26 (151)
T d1q25a2 8 YAFDRELKKHDLNPLIKTS 26 (151)
T ss_dssp EEECTTCCEEECGGGCCSS
T ss_pred EEECCCCCEEeCchhhccC
Confidence 3578889999999886443
No 4
>d1lghb_ f.3.1.1 (B:) Light-harvesting complex subunits {Rhodospirillum molischianum [TaxId: 1083]}
Probab=4.13 E-value=3.6e+02 Score=17.37 Aligned_cols=17 Identities=29% Similarity=0.467 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 014857 398 GFAALTATIVHVALFHGS 415 (417)
Q Consensus 398 ~fA~~ta~i~h~~L~h~~ 415 (417)
.|.++ |++.|++.|-++
T Consensus 24 ~F~~i-AvvAHiLvw~wr 40 (43)
T d1lghb_ 24 AFIIL-AAVAHVLVWVWK 40 (43)
T ss_dssp HHHHH-HHHHHHHHHHHS
T ss_pred HHHHH-HHHHHHHHHHhc
Confidence 34444 889999988765
No 5
>d1qk7a_ g.3.6.2 (A:) Lectin SHL-I {Chinese bird spider (Selenocosmia huwena) [TaxId: 29017]}
Probab=4.04 E-value=1.7e+02 Score=17.56 Aligned_cols=12 Identities=17% Similarity=0.567 Sum_probs=8.6
Q ss_pred CCceeeecCCCC
Q 014857 132 TPLEFTLNPGPF 143 (417)
Q Consensus 132 ~~~~f~LNPGPF 143 (417)
+.|+|-.-||||
T Consensus 21 ~twkwcv~~gpw 32 (32)
T d1qk7a_ 21 RTWKWCVLAGPW 32 (32)
T ss_dssp SSSCBEEECCCC
T ss_pred CceeeeeccCCC
Confidence 346666789997
No 6
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.78 E-value=1.1e+02 Score=25.70 Aligned_cols=8 Identities=38% Similarity=0.742 Sum_probs=3.4
Q ss_pred Cceeecce
Q 014857 359 GREYNITA 366 (417)
Q Consensus 359 G~~Ynvs~ 366 (417)
|+.-|++.
T Consensus 131 g~ivnisS 138 (275)
T d1wmaa1 131 GRVVNVSS 138 (275)
T ss_dssp EEEEEECC
T ss_pred CCcccccc
Confidence 44444443
No 7
>d1m0ka_ f.13.1.1 (A:) Bacteriorhodopsin {Archaeon Halobacterium salinarum [TaxId: 2242]}
Probab=3.55 E-value=1.2e+02 Score=25.77 Aligned_cols=50 Identities=14% Similarity=0.266 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccccCCccccCcchhccccCCceeecceeeCC
Q 014857 315 WFATANVAAGFVLVMYVLTPLCYWLNIYNAKTFPIFSDQLFTTTGREYNITAIIDS 370 (417)
Q Consensus 315 ~~a~~N~~~G~vl~~~ii~p~lyy~N~w~s~~~Pi~S~~lfd~~G~~Ynvs~Il~~ 370 (417)
.-...|.+..+++..|.+.|+.|--+.......+..+..++ ||+-++++|
T Consensus 163 ~~~~~~~l~~~~~v~W~iYPI~~~l~~~g~~~i~~~~~~i~------Y~ilDi~aK 212 (227)
T d1m0ka_ 163 VASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLL------FMVLDVSAK 212 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTTTCCSCHHHHHHH------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccChHHHHHH------HHHHHHHHH
Confidence 34566778888899999999999755443333333332222 666655544
No 8
>d1uaza_ f.13.1.1 (A:) Archaerhodopsin-1 {Archaeon Halobacterium sp. [TaxId: 2243]}
Probab=3.44 E-value=1.2e+02 Score=25.81 Aligned_cols=25 Identities=24% Similarity=0.473 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccc
Q 014857 317 ATANVAAGFVLVMYVLTPLCYWLNI 341 (417)
Q Consensus 317 a~~N~~~G~vl~~~ii~p~lyy~N~ 341 (417)
...|.+..+++..|.+.|+.|.-+.
T Consensus 175 ~~~~~l~~~~~v~W~iYPi~~~l~~ 199 (236)
T d1uaza_ 175 STFNTLTALVLVLWTAYPILWIIGT 199 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4567788888999999999997544
No 9
>d1dt9a2 d.79.3.2 (A:277-422) C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.40 E-value=1.2e+02 Score=24.09 Aligned_cols=7 Identities=57% Similarity=1.075 Sum_probs=4.4
Q ss_pred hhhhhcc
Q 014857 197 GWAGIFR 203 (417)
Q Consensus 197 GlAGl~R 203 (417)
|+||++|
T Consensus 132 GiaAiLR 138 (146)
T d1dt9a2 132 GIGGILR 138 (146)
T ss_dssp TEEEECS
T ss_pred CEEEEEE
Confidence 5666665
No 10
>d1lnsa1 a.40.2.1 (A:1-145) X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=3.15 E-value=2e+02 Score=23.05 Aligned_cols=25 Identities=20% Similarity=0.227 Sum_probs=20.9
Q ss_pred HHhcccchHHHHHHHHHHHhhhhhh
Q 014857 173 VFYKQHFTFFVSLLVVFTTQVLGFG 197 (417)
Q Consensus 173 lfy~~~~~~~~~ill~lStQliGyG 197 (417)
-|++.+-.....++..++-|++||-
T Consensus 61 ~fl~s~~~lt~~vFY~VALQLLgF~ 85 (145)
T d1lnsa1 61 EFLKSSIELDWEIFWNIALQLLDFV 85 (145)
T ss_dssp HHHHSSCCCCHHHHHHHHHHHTTCC
T ss_pred HHHcCCCcCCHHHHHHHHHHHcCCc
Confidence 4788777788888889999999984
Done!