BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014860
(417 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224142259|ref|XP_002324476.1| predicted protein [Populus trichocarpa]
gi|222865910|gb|EEF03041.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 275/425 (64%), Positives = 326/425 (76%), Gaps = 20/425 (4%)
Query: 6 GRNWLRQIFSHRTFNKHLCCTNSSHNSK-------TLSNYYLSQTQINPHLK-------L 51
G + LR I S + F C N+ H+ L+ Y + + +NP + L
Sbjct: 9 GGDCLRYILSKKIFISPPSCINTFHSKNLAKFPFPILTQYSVISSYLNPTARKLKDVDLL 68
Query: 52 SSNAILCSC-----YSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEE 106
+ IL S YS A SRS + KR+KA+S+P LD+ +F+ +VS+LP RF NEE
Sbjct: 69 AQTQILPSSNFSTFYSTKAPSRSFRKRNNKRAKANSRPILDEAKFQRSVSQLPSRFTNEE 128
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
LCN +TL++DPLVCLELFNWAS+Q RFRHDASTYH+ +KLG AKMYQEMDDVVNQ+LA
Sbjct: 129 LCNNITLEDDPLVCLELFNWASQQHRFRHDASTYHVTIKKLGIAKMYQEMDDVVNQLLAV 188
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
P G EALYN+IIY+F EARKL+RAV +FK MK+SRNL+CRPSI++YNIL TA LSRG+
Sbjct: 189 PHI-GNEALYNSIIYYFTEARKLTRAVNIFKRMKSSRNLDCRPSIKTYNILLTAMLSRGR 247
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
N+YINH+YMET+RCLFKQMV+DG+EPDIFSLNSMIKGY LS HVNDALR+FHQMGVVY
Sbjct: 248 NSYINHMYMETMRCLFKQMVDDGVEPDIFSLNSMIKGYALSLHVNDALRVFHQMGVVYKC 307
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
LPNSFSYDYL+HGLCAQGRT NAREL DEMK KGFV S+KS+NSLV+ALAL GEV E V
Sbjct: 308 LPNSFSYDYLVHGLCAQGRTNNARELFDEMKEKGFVLSNKSFNSLVNALALGGEVGEAVN 367
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLED 406
LWEMI+K R VD ITY+TVLDEICR+GR GEA LLKE Q K+L+DG TY +LL VLED
Sbjct: 368 YLWEMIDKHRSVDLITYKTVLDEICRQGRIGEATSLLKEWQEKDLVDGITYRELLHVLED 427
Query: 407 DFGNS 411
DFGNS
Sbjct: 428 DFGNS 432
>gi|449520100|ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like [Cucumis sativus]
Length = 428
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/397 (67%), Positives = 320/397 (80%), Gaps = 6/397 (1%)
Query: 17 RTFNKHLCCTNSSHNSKTLSNYYLSQTQINPH--LKLSSNAILCSCYSAIALSRSSSRGV 74
R F+ H N++H+ ++L +QI+P+ LS L YS A SRS +
Sbjct: 33 RRFSIHSWWLNNTHHYNL--PHFLRVSQIHPYSGPNLSFTNFLLKFYSRAAPSRSFRKRA 90
Query: 75 GKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFR 134
KR K+ KP LD+TQF+ AVS++PPRF +EELCNV++LQ DPLVC ELFNWAS+QPRFR
Sbjct: 91 NKRLKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRFR 150
Query: 135 HDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
HD S+Y I +KLG AKMY+EMD VVNQ LA S G+E LYNT+IYFF EARKL+RAV
Sbjct: 151 HDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSI-GSETLYNTMIYFFTEARKLTRAVN 209
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND-GIEPD 253
+FK+M+N+RNL CRPSIR+YN+LFTAFLSRG+NTYINH+YMETIRCLF+QMVND GIEPD
Sbjct: 210 IFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPD 269
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
IFSLN MIKGY+LS HVNDALRIFHQMGVVY+ LPNS+SYDYLIHGLCAQ RT NA+ELC
Sbjct: 270 IFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSYDYLIHGLCAQARTDNAKELC 329
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+EMK KGFVPSS SYNS+V+ALALNGEVE+ V LWEMI+ +R DFITY+TVLDE+CR+
Sbjct: 330 NEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQ 389
Query: 374 GRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGN 410
G+ EA LL+ELQ K+L+DG+TY KLL VLEDD+GN
Sbjct: 390 GKVVEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGN 426
>gi|449459126|ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like [Cucumis sativus]
Length = 428
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/397 (67%), Positives = 320/397 (80%), Gaps = 6/397 (1%)
Query: 17 RTFNKHLCCTNSSHNSKTLSNYYLSQTQINPH--LKLSSNAILCSCYSAIALSRSSSRGV 74
R F+ H N++H+ ++L +QI+P+ LS L YS A SRS +
Sbjct: 33 RRFSIHSWWLNNTHHYNL--PHFLRVSQIHPYSGPNLSFTNFLLKFYSRAAPSRSFRKRA 90
Query: 75 GKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFR 134
KR K+ KP LD+TQF+ AVS++PPRF +EELCNV++LQ DPLVC ELFNWAS+QPRFR
Sbjct: 91 NKRLKSSLKPKLDETQFQLAVSKIPPRFTSEELCNVISLQRDPLVCFELFNWASQQPRFR 150
Query: 135 HDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
HD S+Y I +KLG AKMY+EMD VVNQ LA S G+E LYNT+IYFF EARKL+RAV
Sbjct: 151 HDDSSYEITIKKLGEAKMYEEMDHVVNQALAVSSI-GSETLYNTMIYFFTEARKLTRAVN 209
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND-GIEPD 253
+FK+M+N+RNL CRPSIR+YN+LFTAFLSRG+NTYINH+YMETIRCLF+QMVND GIEPD
Sbjct: 210 IFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNTYINHMYMETIRCLFRQMVNDDGIEPD 269
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
IFSLN MIKGY+LS HVNDALRIFHQMGVVY+ LPNS+S+DYLIHGLCAQ RT NA+ELC
Sbjct: 270 IFSLNCMIKGYVLSLHVNDALRIFHQMGVVYSCLPNSYSFDYLIHGLCAQARTDNAKELC 329
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+EMK KGFVPSS SYNS+V+ALALNGEVE+ V LWEMI+ +R DFITY+TVLDE+CR+
Sbjct: 330 NEMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQ 389
Query: 374 GRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGN 410
G+ EA LL+ELQ K+L+DG+TY KLL VLEDD+GN
Sbjct: 390 GKVVEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGN 426
>gi|255570807|ref|XP_002526356.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534315|gb|EEF36027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 415
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 265/425 (62%), Positives = 308/425 (72%), Gaps = 49/425 (11%)
Query: 7 RNWLRQIFSHRTFNKHLCCT---------NSSHNSKTLSNYYLSQTQINPHLKLSSNAIL 57
R +L QI+S F + + NS+ NS +N L+QTQ +P S+AI
Sbjct: 6 RYFLTQIYSKFYFPNYPSVSYHSRSYHLLNSTVNSLKFTNV-LAQTQTSPGSNCHSSAIF 64
Query: 58 CSC--------YSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCN 109
C YS LSRS R KR +A KP LD +F+ ++S+LPPRF+NEELCN
Sbjct: 65 SYCFRGFLLSLYSTKPLSRSFRRRQSKRLRASKKPVLDQAKFQESISQLPPRFSNEELCN 124
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+TLQEDPL KLGAAKMYQEMDDVVNQ+LA P
Sbjct: 125 VLTLQEDPL---------------------------KLGAAKMYQEMDDVVNQVLAVPHI 157
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
G EALYNTIIYFF EARKL+RAV +FK+M+NSRNL+ RPSIR+YN LFTA LSRG+N+Y
Sbjct: 158 -GNEALYNTIIYFFTEARKLTRAVNIFKHMRNSRNLDYRPSIRTYNSLFTAMLSRGRNSY 216
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
IN++YMETIRCLFKQMVNDGIEPDI+SLNSMIKGYILSNHVNDALRIFHQMG VYN PN
Sbjct: 217 INYMYMETIRCLFKQMVNDGIEPDIYSLNSMIKGYILSNHVNDALRIFHQMGTVYNCAPN 276
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
SFSYDYLIHGLC QGRT+NAREL D+M++KGFV SS+SYNSLV+ALALNGE+EE V W
Sbjct: 277 SFSYDYLIHGLCVQGRTQNARELYDDMEKKGFVLSSRSYNSLVNALALNGEIEEAVNYFW 336
Query: 350 EMIEKQRPVDFITYRTVLDEICRR---GRAGEAMKLLKELQNKNLIDGYTYTKLLDVLED 406
EM KQ+ DFITYRT+LDE CRR G AGEAM+LLKE + K L+DG+TY KLLDVLED
Sbjct: 337 EMTRKQKSPDFITYRTILDETCRRGSGGEAGEAMRLLKEWEQKGLVDGHTYKKLLDVLED 396
Query: 407 DFGNS 411
DFG+S
Sbjct: 397 DFGSS 401
>gi|357472349|ref|XP_003606459.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507514|gb|AES88656.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 418
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/332 (72%), Positives = 278/332 (83%), Gaps = 3/332 (0%)
Query: 82 SKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYH 141
+KP LD +F+ A S+L PRF EEL NV+ Q DPLVCLELF+WAS QPRFRH+ S++H
Sbjct: 75 NKPVLDQEKFQFAQSQLLPRFTPEELRNVIANQRDPLVCLELFHWASHQPRFRHNESSFH 134
Query: 142 IMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKN 201
+ +KLG AKMYQEMDDVVNQ+LA S G EAL+N IIY+F EARKL+RAV VFK+MK
Sbjct: 135 VTIKKLGDAKMYQEMDDVVNQLLAVRSI-GNEALFNMIIYYFTEARKLTRAVIVFKHMKC 193
Query: 202 SRN--LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNS 259
SRN RPSIR+YNILF AFLSRG NT+IN VYMET+RCLF+QMVN+ IEPDIFSLNS
Sbjct: 194 SRNPNFGFRPSIRTYNILFGAFLSRGYNTHINLVYMETMRCLFRQMVNEHIEPDIFSLNS 253
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
MIKGY+LS HVNDALRIFHQMGVVY+ PNS +YDYLIHGLCA+GRT+NA+EL EMK K
Sbjct: 254 MIKGYVLSLHVNDALRIFHQMGVVYDCKPNSLTYDYLIHGLCAKGRTENAKELYHEMKAK 313
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
GFVPSSKSYNSLV++LAL G+VEE V LWEM EKQ+ VDFITYRTVLDEICRRGR EA
Sbjct: 314 GFVPSSKSYNSLVNSLALVGDVEEAVNYLWEMTEKQKSVDFITYRTVLDEICRRGRVQEA 373
Query: 380 MKLLKELQNKNLIDGYTYTKLLDVLEDDFGNS 411
M+ L+ELQ K+L+DG+TY KLL VLEDD+G+S
Sbjct: 374 MRFLQELQEKDLVDGHTYRKLLYVLEDDYGDS 405
>gi|356544625|ref|XP_003540749.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like [Glycine max]
Length = 438
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 231/360 (64%), Positives = 267/360 (74%), Gaps = 30/360 (8%)
Query: 55 AILCSCYSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQ 114
A S YS A SRS R KR SKP LD QF+ A+S+LPPRF EELCNV+ Q
Sbjct: 81 APFNSHYSTKAPSRSYQRRARKRLLKSSKPTLDQAQFQLALSQLPPRFTPEELCNVIARQ 140
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
DPL KLGAAKMYQEMDD+VNQ+LA P G+EA
Sbjct: 141 NDPL---------------------------KLGAAKMYQEMDDIVNQLLAVP-LIGSEA 172
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC--RPSIRSYNILFTAFLSRGKNTYINH 232
L+N +IY+F +ARKL+RAV VFK+MK+ RNL C RPSIR+YNILF AFL RG N+YINH
Sbjct: 173 LFNMVIYYFTQARKLTRAVNVFKHMKSRRNLNCFFRPSIRTYNILFAAFLGRGSNSYINH 232
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
VYMETIRCLF+QMV DGI+PDIFSLNSMIKGY+LS HVNDALRIFHQMGV+Y+ PN+ +
Sbjct: 233 VYMETIRCLFRQMVKDGIKPDIFSLNSMIKGYVLSLHVNDALRIFHQMGVIYDCPPNALT 292
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
YD LIHGLCAQGRT NA+EL EMK KGFVPSSKSYNSLV++LAL GE+EE V LWEM
Sbjct: 293 YDCLIHGLCAQGRTNNAKELYSEMKTKGFVPSSKSYNSLVNSLALGGEIEEAVNYLWEMT 352
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNSI 412
+KQR DFITY+TVLDEICRRG E + L+ELQ K+L+DG+ Y KLL VLEDD+GNS+
Sbjct: 353 DKQRSADFITYKTVLDEICRRGTVQEGTRFLQELQEKDLVDGHAYRKLLYVLEDDYGNSV 412
>gi|145360404|ref|NP_180348.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546772|sp|Q9ZUY1.2|PP173_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g27800, mitochondrial; Flags: Precursor
gi|330252952|gb|AEC08046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 442
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/348 (61%), Positives = 272/348 (78%), Gaps = 1/348 (0%)
Query: 61 YSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVC 120
YS +RS R + R K+ +KP L+ ++F +S+LPPRF EEL + +TL+EDP +C
Sbjct: 96 YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LFNWAS+QPRF H+ +YHI RKLGAAKMYQEMDD+VNQ+L+ G E LYN+II
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSV-RHIGNENLYNSII 214
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
++F +A KL RAV +F++M S+NLECRP+IR+Y+ILF A L RG N+YINHVYMET+R
Sbjct: 215 FYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRS 274
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF+QMV+ GIEPD+F+LN ++KGY+LS HVNDALRIFHQM VVY+ PNSF+YDYLIHGL
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
CAQGRT NAREL EMK KGFVP+ KSYNSLV+A AL+GE+++ VK LWEMIE R VDF
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDF 408
I+YRT++DE CR+G+ EA +LL+ L+ K L+D +Y KL++VL D
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKDL 442
>gi|359478687|ref|XP_002282154.2| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like [Vitis vinifera]
Length = 356
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/362 (63%), Positives = 273/362 (75%), Gaps = 35/362 (9%)
Query: 58 CSCYSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDP 117
CS YS+ A RS + KR KA++KP L++ QF A+SEL PRF+ ELC V+ LQEDP
Sbjct: 25 CS-YSSGAF-RSFKKRARKRLKANAKPCLNEAQFHQAISELLPRFSAGELCEVLNLQEDP 82
Query: 118 LVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYN 177
+ KLG K+YQEMDDVVNQ+L+ P+ G+EALY
Sbjct: 83 I---------------------------KLGTTKLYQEMDDVVNQLLSEPNI-GSEALYT 114
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
TIIYF EARKL+RA +FK+M++ NL+CRPSIR+YN+LF AFLSR ++YINH+YM T
Sbjct: 115 TIIYFLTEARKLTRAAIIFKHMRSCSNLDCRPSIRTYNLLFAAFLSRRSDSYINHMYMAT 174
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
IRCLFKQMVNDGIEPD+FSLNSMI+GY+LS HVNDALRIFHQMGVVYN LPNS SYDYLI
Sbjct: 175 IRCLFKQMVNDGIEPDVFSLNSMIEGYVLSLHVNDALRIFHQMGVVYNCLPNSHSYDYLI 234
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
HGLCAQ RT NAR+LC+EMK KGFVPSSKSYNSLV+ALAL GEV+E V LWEM EKQR
Sbjct: 235 HGLCAQDRTNNARKLCNEMKGKGFVPSSKSYNSLVNALALCGEVDEAVNYLWEMTEKQRS 294
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFG-----NSI 412
DFITY+TVLD+ICR+GR +AM LLKELQ K+L+DG+TY KLL +LE +FG N
Sbjct: 295 ADFITYQTVLDQICRQGRTQDAMSLLKELQVKDLLDGHTYQKLLSLLEQEFGKLNNQNQF 354
Query: 413 RH 414
RH
Sbjct: 355 RH 356
>gi|3860252|gb|AAC73020.1| hypothetical protein [Arabidopsis thaliana]
Length = 427
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/342 (61%), Positives = 270/342 (78%), Gaps = 1/342 (0%)
Query: 67 SRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNW 126
+RS R + R K+ +KP L+ ++F +S+LPPRF EEL + +TL+EDP +C LFNW
Sbjct: 87 TRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNW 146
Query: 127 ASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA 186
AS+QPRF H+ +YHI RKLGAAKMYQEMDD+VNQ+L+ G E LYN+II++F +A
Sbjct: 147 ASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSV-RHIGNENLYNSIIFYFTKA 205
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
KL RAV +F++M S+NLECRP+IR+Y+ILF A L RG N+YINHVYMET+R LF+QMV
Sbjct: 206 GKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMV 265
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
+ GIEPD+F+LN ++KGY+LS HVNDALRIFHQM VVY+ PNSF+YDYLIHGLCAQGRT
Sbjct: 266 DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRT 325
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
NAREL EMK KGFVP+ KSYNSLV+A AL+GE+++ VK LWEMIE R VDFI+YRT+
Sbjct: 326 INARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTL 385
Query: 367 LDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDF 408
+DE CR+G+ EA +LL+ L+ K L+D +Y KL++VL D
Sbjct: 386 VDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKDL 427
>gi|297822503|ref|XP_002879134.1| hypothetical protein ARALYDRAFT_481728 [Arabidopsis lyrata subsp.
lyrata]
gi|297324973|gb|EFH55393.1| hypothetical protein ARALYDRAFT_481728 [Arabidopsis lyrata subsp.
lyrata]
Length = 436
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 209/348 (60%), Positives = 271/348 (77%), Gaps = 1/348 (0%)
Query: 61 YSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVC 120
YS +RS R + R K+ +KP L++ +F+ +++LPPRF EEL + +TL+EDP +C
Sbjct: 90 YSTSVPTRSLRRRISNRKKSSTKPVLNEFKFQETITKLPPRFTPEELADAITLEEDPFLC 149
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LFNWAS+QPRF+H +YHI RKLGAAKMY+EMDD+VNQ+L+ G E LYN+II
Sbjct: 150 FHLFNWASQQPRFKHVNCSYHIAIRKLGAAKMYKEMDDIVNQVLSV-RHIGNENLYNSII 208
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
++F +A KL RAV +F++M S NLECRP+IR+Y+ILF A L RG N+Y +H+YMET+R
Sbjct: 209 FYFTKAGKLIRAVNIFRHMVTSMNLECRPTIRTYHILFKALLGRGNNSYTSHMYMETVRS 268
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF+QMV+ GIEPD+F+LN ++KGY+LS HVNDALRIFHQM VVYN PNSF+YDYLIHGL
Sbjct: 269 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYNCQPNSFTYDYLIHGL 328
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
CAQGRT NAREL +EMK KGFVP+ KSYNSLV+A AL GE+++ VK LWEMIE R VDF
Sbjct: 329 CAQGRTINARELLNEMKGKGFVPNGKSYNSLVNAFALTGEIDDAVKCLWEMIENGRVVDF 388
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDF 408
ITYRT++DE CR+G+ EA ++L+ L+ K L+D +Y KL++VL D
Sbjct: 389 ITYRTLVDESCRKGKYDEATRVLERLREKQLVDRDSYEKLVNVLHKDL 436
>gi|297746219|emb|CBI16275.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/431 (44%), Positives = 251/431 (58%), Gaps = 108/431 (25%)
Query: 3 IIAGRNWLRQIFSHRTFNKHLCCTNSSHNSKTLSNY---------YLSQT-------QIN 46
+ + RN ++Q+FS C N S SK SNY YL Q +++
Sbjct: 10 LCSSRNSIKQVFSRNP------CQNYSPYSKIYSNYTPSALDFPCYLHQINNTSNPKKLS 63
Query: 47 PHLKLSSNA-------ILCSCYSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELP 99
+++ SN+ CS YS+ A RS + KR KA++KP L++ QF A+SEL
Sbjct: 64 TQIQIGSNSYKYTHLSFYCS-YSSGAF-RSFKKRARKRLKANAKPCLNEAQFHQAISELL 121
Query: 100 PRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV 159
PRF+ ELC V+ LQEDP+VCLE+FNWAS+QPRFRHD STYHI+ +KLG K+
Sbjct: 122 PRFSAGELCEVLNLQEDPIVCLEIFNWASQQPRFRHDVSTYHIIIKKLGTTKL------- 174
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
KL+RA +FK+M++ NL+CRPSIR+YN+LF
Sbjct: 175 ----------------------------KLTRAAIIFKHMRSCSNLDCRPSIRTYNLLFA 206
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
AFLSR ++YINH+YM TIRCLFKQMVNDGIEPD+FSLNSMI+GY+LS H+ + ++
Sbjct: 207 AFLSRRSDSYINHMYMATIRCLFKQMVNDGIEPDVFSLNSMIEGYVLSLHLCNEMK---- 262
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
++P+S SY+ L V+ALAL G
Sbjct: 263 ---GKGFVPSSKSYNSL-----------------------------------VNALALCG 284
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTK 399
EV+E V LWEM EKQR DFITY+TVLD+ICR+GR +AM LLKELQ K+L+DG+TY K
Sbjct: 285 EVDEAVNYLWEMTEKQRSADFITYQTVLDQICRQGRTQDAMSLLKELQVKDLLDGHTYQK 344
Query: 400 LLDVLEDDFGN 410
LL +LE + N
Sbjct: 345 LLSLLEQEAKN 355
>gi|238481392|ref|NP_001154742.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332006287|gb|AED93670.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 550
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 213/354 (60%), Gaps = 78/354 (22%)
Query: 40 LSQTQINPHLKLSSNAILCSCYSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELP 99
L Q+QI L ++ +C+ YS +RS R + R K+ +KP L++++F+ +S+LP
Sbjct: 46 LPQSQIEGRL---ASVSMCTQYSTSVPTRSLRRRISSRKKSSTKPILNESKFQETISKLP 102
Query: 100 PRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV 159
PRF EEL + +TL+EDP +C LFNWAS+QPRF H+ +YHI RKLGAAK
Sbjct: 103 PRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAK-------- 154
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
+ KL RAV +F++M NSRNLECRP++R+Y+ILF
Sbjct: 155 --------------------------SGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFK 188
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
A L RG N++INH+YMET+R LF+QMV+ GIEPD+F+LN ++K
Sbjct: 189 ALLGRGNNSFINHLYMETVRSLFRQMVDSGIEPDVFALNCLVK----------------- 231
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
GRT N REL EMK KGFVP+ KSYNSLV+A AL+G
Sbjct: 232 ------------------------GRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSG 267
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
E+++ VK LWEMIE R VDFI+YRT++DE CR+G+ EA +LL+ L+ K L+D
Sbjct: 268 EIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVD 321
>gi|240256351|ref|NP_198082.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332006286|gb|AED93669.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 575
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 205/337 (60%), Gaps = 75/337 (22%)
Query: 57 LCSCYSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQED 116
+C+ YS +RS R + R K+ +KP L++++F+ +S+LPPRF EEL + +TL+ED
Sbjct: 85 MCTQYSTSVPTRSLRRRISSRKKSSTKPILNESKFQETISKLPPRFTPEELADAITLEED 144
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY 176
P +C LFNWAS+QPRF H+ +YHI RKLGAAK
Sbjct: 145 PFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAK------------------------- 179
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
+ KL RAV +F++M NSRNLECRP++R+Y+ILF A L RG N++INH+YME
Sbjct: 180 ---------SGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYME 230
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+R LF+QMV+ GIEPD+F+LN ++K
Sbjct: 231 TVRSLFRQMVDSGIEPDVFALNCLVK---------------------------------- 256
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
GRT N REL EMK KGFVP+ KSYNSLV+A AL+GE+++ VK LWEMIE R
Sbjct: 257 -------GRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGR 309
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
VDFI+YRT++DE CR+G+ EA +LL+ L+ K L+D
Sbjct: 310 VVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVD 346
>gi|357130959|ref|XP_003567111.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
mitochondrial-like [Brachypodium distachyon]
Length = 389
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 208/363 (57%), Gaps = 9/363 (2%)
Query: 56 ILCSCYSA---IALSRSSSRGVGK--RS-KADSKPALDDTQFRCAVSELPPRFNNEELCN 109
ILC+ + I S SS R + RS +A S+P + A++ LP R L +
Sbjct: 8 ILCTTPALSHRIPFSTSSRRTPHRFRRSHRAPSRPPSAEA-VSAAIASLPSRLTPPVLAS 66
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT-PS 168
+ D + L + P FR D + + ++LG A++Y E D + PS
Sbjct: 67 SLASTSDARLLFPLLTHSLGLPTFRPDPGPFLVAIKRLGTAELYHEFDRTCALFFSLLPS 126
Query: 169 FCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN- 227
L +YF+ + RKL +A +V+ M++S + RP+ +Y+ LFTA +SRG N
Sbjct: 127 LPSPGPLLRAALYFYCQFRKLGKAFHVYTLMRSSADPGARPAADTYHALFTALVSRGGND 186
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
T ++++YM+T+ LF+QM+ +GI PD SLN +++GY S H+NDALR+FHQMG Y
Sbjct: 187 TMVHYMYMDTVSALFRQMLEEGIPPDTRSLNVLVRGYAQSLHLNDALRVFHQMGPSYGCE 246
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P++F+Y YL+HGL QGRTKNAR+L DEM+ KG VP+ S N+ VSALA+ GEV E +
Sbjct: 247 PDAFTYSYLVHGLSEQGRTKNARQLFDEMRGKGMVPTEPSCNAFVSALAVAGEVGEAERV 306
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDD 407
+WEM VD IT +++E+ R G+ +A ++++E++ ++ LL + D+
Sbjct: 307 MWEMARSGTVVDRITRSALVEELGRAGKREDADRVVREMEEMGIVGVTERRALLCSVHDE 366
Query: 408 FGN 410
G+
Sbjct: 367 DGD 369
>gi|115439909|ref|NP_001044234.1| Os01g0747600 [Oryza sativa Japonica Group]
gi|14209530|dbj|BAB56026.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533765|dbj|BAF06148.1| Os01g0747600 [Oryza sativa Japonica Group]
gi|215707200|dbj|BAG93660.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768590|dbj|BAH00819.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 387
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 195/337 (57%), Gaps = 3/337 (0%)
Query: 76 KRSKADSKPALDDTQ-FRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFR 134
+RS+ PA + A++ LP R L ++ D + L + + + FR
Sbjct: 37 RRSRRSPNPAPPSPEAVSAAIATLPSRLTPPLLSYSLSSVSDARLLLPVLTHSLRLATFR 96
Query: 135 HDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT-PSFCGTEALYNTIIYFFAEARKLSRAV 193
D + + ++L AA +Y + D + PS T +YF+ + RK+ +A
Sbjct: 97 PDPGPFLVAIKRLAAADLYADFDRTCALAFSLLPSLPSPGPFLRTALYFYCQFRKIGKAF 156
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEP 252
+V+ M+ S + RPS +Y+ LFTA LSRG +T ++++YM+T+ LF+QM+ +G+ P
Sbjct: 157 HVYTLMRASADPAARPSADTYHALFTALLSRGGGDTMVHYMYMDTVSALFRQMLEEGVPP 216
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D +LN ++KGY S H+NDALR+FHQM VY P++ +Y YL+HGL QGRT+NARE+
Sbjct: 217 DTRALNVLVKGYAQSLHLNDALRVFHQMRPVYGCEPDALTYSYLVHGLSEQGRTRNAREV 276
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
DEM KG P+ + N+ VSALA+ GE E + +W+M R VD +T R V++E+ R
Sbjct: 277 FDEMLAKGLAPTEPACNTFVSALAMAGEAGEAERVMWDMARAGRVVDDVTRRAVVEELWR 336
Query: 373 RGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFG 409
GR +A ++++E++ + ++ G LL L D+FG
Sbjct: 337 SGRRDDAERVVREMEERGIVGGAERRALLRSLHDEFG 373
>gi|125527692|gb|EAY75806.1| hypothetical protein OsI_03721 [Oryza sativa Indica Group]
Length = 387
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 194/337 (57%), Gaps = 3/337 (0%)
Query: 76 KRSKADSKPALDDTQ-FRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFR 134
+RS+ PA + A++ LP R L ++ D + L + + + FR
Sbjct: 37 RRSRRSPNPAPPSPEAVSAAIATLPSRLTPPLLSYSLSSVSDARLLLPVLTHSLRLATFR 96
Query: 135 HDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT-PSFCGTEALYNTIIYFFAEARKLSRAV 193
D + + ++L AA +Y + D + PS T +YF+ + RK+ +A
Sbjct: 97 PDPGPFLVAIKRLAAADLYADFDRTCALAFSLLPSLPSPGPFLRTALYFYCQFRKIGKAF 156
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEP 252
+V+ M+ S + RPS +Y+ LFTA LSRG +T ++++YM+T+ LF+QM+ +G+
Sbjct: 157 HVYTLMRASADPAARPSADTYHALFTALLSRGGGDTMVHYMYMDTVSALFRQMLEEGVPL 216
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D +LN ++KGY S H+NDALR+FHQM VY P++ +Y YL+HGL QGRT+NARE+
Sbjct: 217 DTRALNVLVKGYAQSLHLNDALRVFHQMRPVYGCEPDALTYSYLVHGLSEQGRTRNAREV 276
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
DEM KG P+ + N+ VSALA+ GE E + +W+M R VD +T R V++E+ R
Sbjct: 277 FDEMLAKGLAPTEPACNAFVSALAMAGEAGEAERVMWDMARAGRVVDDVTRRAVVEELWR 336
Query: 373 RGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFG 409
GR +A ++++E++ + ++ G LL L D+FG
Sbjct: 337 SGRRDDAERVVREMEERGIVGGAERRALLRSLHDEFG 373
>gi|293332247|ref|NP_001170072.1| uncharacterized protein LOC100383988 [Zea mays]
gi|224033255|gb|ACN35703.1| unknown [Zea mays]
gi|414880495|tpg|DAA57626.1| TPA: hypothetical protein ZEAMMB73_709118 [Zea mays]
Length = 384
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 191/334 (57%), Gaps = 4/334 (1%)
Query: 76 KRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRH 135
+RS + P+ D A++ LP R L + + D + L L + + P FR
Sbjct: 38 RRSPKPAPPSPDAVS--AAIASLPSRLTPPVLASFLASTSDARLLLPLLTHSLRIPAFRP 95
Query: 136 DASTYHIMTRKLGAAKMYQEMDDV-VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
D + + + ++L + +Y++ D PS L +YF+ + +L +A +
Sbjct: 96 DPAPFLVAIKRLATSDLYEDFDRTCALSFSLLPSLSSPGPLLRNALYFYCQFGRLGKAFH 155
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEPD 253
V+ M+ S + RPS +Y+ LFTA LSRG +T ++++YM+ + LF+QM+ +GI PD
Sbjct: 156 VYTLMRASADPAARPSSDTYHALFTALLSRGGGDTLVHYMYMDNVSALFRQMLEEGIPPD 215
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+LN +I+GY S H+NDALR+FHQM +Y P++F+Y YL+HGL AQGRT+NAREL
Sbjct: 216 TRTLNVLIRGYAQSLHLNDALRLFHQMRPLYGCEPDAFTYSYLVHGLSAQGRTRNARELF 275
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
EM+ G +P+ + N+ V ALA+ GE + + +WEM R VD IT R ++DE+ R
Sbjct: 276 GEMRGSGLLPTEPACNAFVGALAMAGEAADAERVMWEMARAGRVVDDITRRALVDELSRA 335
Query: 374 GRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDD 407
G+ +A +L +E++ K ++ LL + DD
Sbjct: 336 GKREDADRLAREMEQKGIVSARELRALLSSIRDD 369
>gi|242058669|ref|XP_002458480.1| hypothetical protein SORBIDRAFT_03g034460 [Sorghum bicolor]
gi|241930455|gb|EES03600.1| hypothetical protein SORBIDRAFT_03g034460 [Sorghum bicolor]
Length = 387
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 181/311 (58%), Gaps = 2/311 (0%)
Query: 93 CAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKM 152
A++ LP RF L + + D + L L + P FR D + + + ++L A +
Sbjct: 56 AAIASLPSRFTPPVLASFLASTSDTRLLLPLLTHSLHLPAFRPDPAPFLVAIKRLATADL 115
Query: 153 YQEMDDV-VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
Y + D PS L +YF+ + +L +A +V+ M+ S + RPS
Sbjct: 116 YADFDRTCALSFSLLPSLSSPGPLLRNALYFYCQFGRLGKAFHVYTLMRASADPAARPSA 175
Query: 212 RSYNILFTAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+Y+ LFTA LSRG +T ++++YM+ + LF+QM+ +GI PD +LN +I+GY S H+
Sbjct: 176 DTYHALFTALLSRGGGDTLVHYMYMDNVTALFRQMLEEGIPPDTRTLNVLIRGYAQSLHL 235
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
NDALR+FHQM +Y P++F+Y YL+HGL AQGRT+NAREL DEM+ G +P+ + N+
Sbjct: 236 NDALRLFHQMRPLYGCEPDAFTYSYLVHGLSAQGRTRNARELFDEMRGNGLLPTEPACNA 295
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
V ALA+ GE + + +WEM R VD IT R +++E+ R G+ EA +L +E++ K
Sbjct: 296 FVGALAMAGEARDAERVMWEMARAGRVVDDITRRALVEELSRVGKREEADRLAREMEQKG 355
Query: 391 LIDGYTYTKLL 401
++ LL
Sbjct: 356 IVSARELRALL 366
>gi|326504322|dbj|BAJ90993.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 393
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 200/362 (55%), Gaps = 10/362 (2%)
Query: 56 ILCSCYSAIALSR-----SSSRGVG---KRSKADSKPALDDTQFRCAVSELPPRFNNEEL 107
ILCS + +LS +SSR +RS A AV+ LP R L
Sbjct: 8 ILCSTPAGASLSHRLPFGTSSRRTPHRFRRSHRAPSQAPSPDAVSAAVASLPSRLTPAVL 67
Query: 108 CNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT- 166
+ D + L + +P FR D + + ++LGAA +Y E D +
Sbjct: 68 ATSLASTSDLRLLFPLLTHSLGRPTFRPDPGPFLVAIKRLGAAGLYHEFDRTCGLFFSLL 127
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
PS L +YF+ E R+L +A +V+ M++S + RP+ +Y+ LFTA LS G
Sbjct: 128 PSLPSPGPLLRAALYFYCEFRRLGKAFHVYTLMRSSADPAARPAADTYHALFTALLSCGG 187
Query: 227 N-TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
N + ++++YM+T+ LF+QM+ +G+ PD +LN +++GY S H+NDALR+FHQM VY
Sbjct: 188 NDSMVHYMYMDTVSALFRQMLEEGLPPDTRALNVLVRGYAQSLHLNDALRVFHQMAPVYG 247
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+ +Y YL+ GL AQGRT+NA EL DEM+ KG +P+ + N+ VSALA+ GE E
Sbjct: 248 CEPDGLTYSYLVRGLSAQGRTRNAEELFDEMRGKGMMPTEPACNAFVSALAVAGEAAEAE 307
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLE 405
+ +W+M VD IT R V++E+ R G+ +A +++ E++ ++ +LL ++
Sbjct: 308 RVMWDMARAGAVVDHITRRAVVEELGRAGKREDAERVVGEMEEMGMLRVAERRELLASIQ 367
Query: 406 DD 407
DD
Sbjct: 368 DD 369
>gi|356555506|ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Glycine max]
Length = 372
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 184/319 (57%), Gaps = 5/319 (1%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+ QF V L P F ++ + Q DP + L++F W ++Q ++H TY I+ + L
Sbjct: 51 EKQFETWVQALKPGFTPSDVAQALQAQSDPDLALDIFRWTAQQRNYKHTHHTYLIIIKHL 110
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL-SRAVYVFKYMKNSRNLE 206
A + Y + ++ +++A + LYN+II F + L +RA V+K M NSR+
Sbjct: 111 IAGRRYHHAETLIEEVIAGACDDASIPLYNSIIRFCCGRKFLFNRAFDVYKKMLNSRD-- 168
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C+P++ +Y++LF + L R + +VY+ +R L KQM G+ PD F LN +IK Y
Sbjct: 169 CKPNLETYSLLFNSLLRRFNKLNVCYVYLHAVRSLTKQMKASGVIPDSFVLNMIIKAYAK 228
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V++A+R+F +MG+ Y PN++SY Y+ GLC +GR EM+ KG VPS+
Sbjct: 229 CLEVDEAIRVFREMGL-YGCEPNAYSYGYIAKGLCEKGRVDQGLRFYREMRGKGLVPSTS 287
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++ +V +LA+ E+ ++ L++M+ + R D +TY+TVL+ +CR GR EA +LL E
Sbjct: 288 TFVIIVCSLAMERRFEDAIEVLFDMLGQSRSPDHLTYKTVLEGLCREGRVDEAFELLDEC 347
Query: 387 QNKNLIDG-YTYTKLLDVL 404
+ +++ G TY LL+ L
Sbjct: 348 KKRDVSMGEKTYKSLLNDL 366
>gi|222619242|gb|EEE55374.1| hypothetical protein OsJ_03442 [Oryza sativa Japonica Group]
Length = 226
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 142/212 (66%), Gaps = 1/212 (0%)
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
M+ S + RPS +Y+ LFTA LSRG +T ++++YM+T+ LF+QM+ +G+ PD +L
Sbjct: 1 MRASADPAARPSADTYHALFTALLSRGGGDTMVHYMYMDTVSALFRQMLEEGVPPDTRAL 60
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N ++KGY S H+NDALR+FHQM VY P++ +Y YL+HGL QGRT+NARE+ DEM
Sbjct: 61 NVLVKGYAQSLHLNDALRVFHQMRPVYGCEPDALTYSYLVHGLSEQGRTRNAREVFDEML 120
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG P+ + N+ VSALA+ GE E + +W+M R VD +T R V++E+ R GR
Sbjct: 121 AKGLAPTEPACNTFVSALAMAGEAGEAERVMWDMARAGRVVDDVTRRAVVEELWRSGRRD 180
Query: 378 EAMKLLKELQNKNLIDGYTYTKLLDVLEDDFG 409
+A ++++E++ + ++ G LL L D+FG
Sbjct: 181 DAERVVREMEERGIVGGAERRALLRSLHDEFG 212
>gi|357447207|ref|XP_003593879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482927|gb|AES64130.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 360
Score = 197 bits (500), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 180/306 (58%), Gaps = 7/306 (2%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+ QF ++ L P F ++ + +T Q DP + L++F W S+Q ++H + TYH + L
Sbjct: 40 EKQFETWINHLKPGFTPTDVNHALTSQSDPDLALDIFRWTSQQRSYKHTSLTYHTIITHL 99
Query: 148 GAAKMYQEMDDVVNQMLATPSFC-GTEALYNTIIYFFAEARKL-SRAVYVFKYMKNSRNL 205
++ YQ+ + +V ++LA C T L+NTI++F + L +RA V+ M NS+
Sbjct: 100 ATSRHYQQAETLVEEVLAGA--CEPTLPLFNTILHFCCSRKFLFNRAFDVYNIMLNSQ-- 155
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+ +P++ +Y +LF + L R + +VY+ ++R L KQM G+ PD F LN +IK Y
Sbjct: 156 DAKPNLETYTLLFNSLLRRFNKLNVCYVYLRSVRSLTKQMKAIGVIPDTFVLNMIIKAYA 215
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V++A+R+F +MG+ YN N++SY Y+ GLC +GR + EM+ K VPS+
Sbjct: 216 KCLEVDEAIRVFREMGL-YNCEANAYSYSYIAKGLCEKGRVEQGFGFYKEMRVKCLVPST 274
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +V +LAL E+ ++ +++M+ R D +TY+TVL+ +C GR EA +LL E
Sbjct: 275 STYVIIVCSLALERRFEDAIEVMFDMLGNSRSPDCLTYKTVLEGLCHEGRVDEAFELLDE 334
Query: 386 LQNKNL 391
+ +++
Sbjct: 335 FKKRDV 340
>gi|293333657|ref|NP_001168754.1| hypothetical protein [Zea mays]
gi|223972833|gb|ACN30604.1| unknown [Zea mays]
gi|413952901|gb|AFW85550.1| hypothetical protein ZEAMMB73_871922 [Zea mays]
Length = 394
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 173/322 (53%), Gaps = 8/322 (2%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
D QF V+ L P F +L +T +EDP + L LF WA+ +P FRH +Y
Sbjct: 55 DEQFAAWVTRLRPGFTASDLAAAITAEEDPDLALALFRWAALRPGFRHAPESYLAALTAA 114
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVY-VFKYMKN-SRN 204
+ + + +V+ + A C + L+N + F R L + + +F M+
Sbjct: 115 SSGRRPAAAEALVHDVFA--GACAPDLRLFNACLRFCCARRSLFQLAFDMFNKMRAMPAA 172
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
CRP + +Y +L TA + R + + VY+ +R L++QM G+ PD F LN +IK Y
Sbjct: 173 AGCRPDVETYTLLLTAVVRRVRRPPASMVYLHAVRSLYRQMKASGVVPDTFLLNLIIKAY 232
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
V++AL++F +M + Y PN F+Y Y++ + +GR+ E EM+ KGFVPS
Sbjct: 233 ARCVEVDEALKVFREMPL-YGCEPNEFTYGYIVKAMFQKGRSDKGMEYFAEMREKGFVPS 291
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
Y VSALAL +E+ + L +M++ R D ITYRT+L+E+CR GR EA +L+
Sbjct: 292 GGVYMIAVSALALEWRFDESRRVLLDMLDCGRKPDMITYRTLLEEMCRAGRTEEAFDVLE 351
Query: 385 ELQN--KNLIDGYTYTKLLDVL 404
EL+ + +D Y++LLD L
Sbjct: 352 ELKGRKRGTLDQRMYSELLDGL 373
>gi|255587691|ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525434|gb|EEF28024.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 382
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 180/321 (56%), Gaps = 8/321 (2%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+TQF L P F ++ + Q DP + ++F W ++Q ++H TY M + L
Sbjct: 62 ETQFETWTQTLKPGFTPTDVQTALRSQSDPDLAYDIFRWTAQQRNYKHSHLTYFAMIKIL 121
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL--SRAVYVFKYMKNSRNL 205
K Y+ + +V +++A + LYN++I F RKL +RA V+K M S +
Sbjct: 122 IDGKRYRHAETLVEEVIAGACEMNVQ-LYNSMIRFCC-GRKLLFNRAFDVYKKMLQSDD- 178
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
C+P++ +Y +L + L R + +VY+ ++ L KQM G+ PD F+LN +IK +
Sbjct: 179 -CKPTLETYTLLLNSLLRRFNKLNVCYVYLHAVKSLTKQMKASGVIPDTFALNMIIKAFA 237
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V++A+R+F +MG+ Y PN +SY Y++ GLC +GR EMKRK +PS
Sbjct: 238 KCREVDEAIRVFREMGL-YGCEPNGYSYGYIVKGLCEKGRVGQGLGFYKEMKRKELIPSG 296
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y L+ +LA++ + E + +++M+ DF+TYRTVL+ +CR G+ EA +LL+E
Sbjct: 297 GTYMILICSLAVDLRLGEAIDVVFDMLANSMSPDFLTYRTVLEGLCREGKTDEAFELLEE 356
Query: 386 LQNKNL-IDGYTYTKLLDVLE 405
+ +++ + TY LL+ L+
Sbjct: 357 FRKRDMSMSQKTYKILLNALQ 377
>gi|242094968|ref|XP_002437974.1| hypothetical protein SORBIDRAFT_10g005740 [Sorghum bicolor]
gi|241916197|gb|EER89341.1| hypothetical protein SORBIDRAFT_10g005740 [Sorghum bicolor]
Length = 397
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 172/322 (53%), Gaps = 8/322 (2%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
D QF V+ L P F +L +T +EDP + L LF WA+ +P FRH +Y
Sbjct: 59 DEQFAAWVTRLRPGFTASDLAAAITAEEDPDLALALFRWAALRPGFRHAPESYLAALTAA 118
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKL-SRAVYVFKYMKN-SRN 204
+ + + +V+ + A C + L+N + F R L A +F M+
Sbjct: 119 SSGRRPAAAEALVHDVFA--GACAPDLRLFNACLRFCCARRSLFPLAFDLFNKMRAMPAA 176
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
CRP + +Y +L TA + R + + VY+ +R L +QM G+ PD F LN +IK Y
Sbjct: 177 AGCRPDVETYTLLLTAVVRRVRRPPASMVYLHAVRSLSRQMKASGVVPDTFLLNLIIKAY 236
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+++AL++F +M + Y PN F+Y Y++ + +GR+ E EM+ KGFVPS
Sbjct: 237 ARCVEIDEALKVFREMPL-YGCEPNEFTYGYIVKAMFQKGRSDKGMEYFAEMRDKGFVPS 295
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
Y VSALAL EE+ + L +M++ R D ITYRT+L+E+CR GR EA ++L+
Sbjct: 296 GGVYMIAVSALALEWRFEESRRVLLDMLDCGRKPDMITYRTLLEELCRAGRTEEAFEVLE 355
Query: 385 ELQN--KNLIDGYTYTKLLDVL 404
EL+ + +D Y++LLD L
Sbjct: 356 ELKGRKRGPLDQRMYSELLDGL 377
>gi|449453304|ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Cucumis sativus]
gi|449516331|ref|XP_004165200.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Cucumis sativus]
Length = 393
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 183/319 (57%), Gaps = 6/319 (1%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+ QF V +L P F+ ++ + Q DP + L+LF W ++Q ++H+ TY + + L
Sbjct: 73 EKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLFRWTAQQRGYKHNHLTYLTIIKIL 132
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFF-AEARKLSRAVYVFKYMKNSRNLE 206
+ + +V +++A LYN++I F A + +RA V+K M S +
Sbjct: 133 IYRRRCHLAETLVEEVIAGACEMSV-PLYNSVIRFCCARKCRFNRAFDVYKKMWKSDD-- 189
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C+P++ +Y +LF + L R +++VY+ ++R L KQM + G+ PD F LN +IK Y
Sbjct: 190 CKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMKSSGVIPDTFVLNMIIKAYSK 249
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V++A+R+F +MG+ Y PNS++Y Y+ GLC +GR + E EM+ +G +PSS
Sbjct: 250 CLEVDEAIRVFREMGL-YACQPNSYTYGYIAKGLCEKGRVEQGLEFYKEMRVRGLIPSSS 308
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y L+ +LA+ EE ++ ++M+ D +TYRT+L+ +CR GR EA LL EL
Sbjct: 309 TYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDEL 368
Query: 387 QNKN-LIDGYTYTKLLDVL 404
+ ++ L++ T+ LL+ L
Sbjct: 369 RKRDKLMNEKTFKTLLNGL 387
>gi|326508466|dbj|BAJ95755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 438
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 178/322 (55%), Gaps = 8/322 (2%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
D QF V+ L P F +L + + ++DP + L LF WA +P FRH ++Y
Sbjct: 95 DDQFAAWVTRLRPGFTACDLADAINSEQDPDLALALFRWAGLRPGFRHAPASYIAALNAA 154
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTE-ALYNTIIYFFAEARKLSRAVY-VFKYMKN-SRN 204
+ K +++++ +LA C + L+N + F + R L + +F M+ N
Sbjct: 155 SSGKRPVAAENLIHDVLA--GACPPDLQLFNACLRFCCDRRSLFPIAFDMFNKMRALPAN 212
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
CRP++ ++ +L + + R + + VY+ +R L +QM G+ PD + LN +IK Y
Sbjct: 213 AGCRPNVETFTLLLSTVVRRVRRPPASLVYLHAVRSLSRQMKATGVVPDTYLLNLIIKAY 272
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
V+DAL++F +M + Y+ PN F+Y Y++ + +GRT N EM+ KGFVPS
Sbjct: 273 GRCLEVDDALKVFREMPL-YSCEPNEFTYGYIVKAMFQKGRTDNGLAYLKEMREKGFVPS 331
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
Y S V+ALAL EE+ + L +M++ +R D ITYRT+L+E+CR R +A +LL+
Sbjct: 332 GGVYMSAVAALALEWRFEESREVLLDMLDSKRKPDMITYRTLLEELCRATRTEDAFQLLE 391
Query: 385 ELQ--NKNLIDGYTYTKLLDVL 404
EL+ + +D Y++LLD L
Sbjct: 392 ELKERKRGALDQRMYSELLDGL 413
>gi|125554331|gb|EAY99936.1| hypothetical protein OsI_21939 [Oryza sativa Indica Group]
Length = 388
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 177/325 (54%), Gaps = 8/325 (2%)
Query: 85 ALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMT 144
A D QF V+ L P F +L ++ + DP + L LF WA+ +P FRH ++Y
Sbjct: 47 APPDEQFAAWVARLRPGFTAGDLAEAISSERDPDLALALFRWAALRPGFRHAPASYLAAL 106
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTE-ALYNTIIYFFAEARKL-SRAVYVFKYMKN- 201
+ + +++V +LA CG + L+N + F R+L A +F M++
Sbjct: 107 TAASSGRRPAAAENLVYDVLA--GACGPDLQLFNACLRFCCARRRLFPLAFDMFNKMRSL 164
Query: 202 SRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMI 261
+ CRP + +Y +L TA + R + + VY+ +R L +QM G+ PD F LN +I
Sbjct: 165 PASAACRPDVETYTLLLTAVVRRVRRPPASIVYLHAVRSLSRQMKASGVVPDTFLLNLII 224
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
K Y V+DAL++F +M +Y N F+Y Y++ + +GRT E + KGF
Sbjct: 225 KAYARCLEVDDALKVFREM-PLYGCEANEFTYGYIVKAMFQKGRTDKGMVYFREAREKGF 283
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
VP+ Y + VSALAL EE+ L +M++ +R D ITYRT+++E+CR GRA +A +
Sbjct: 284 VPTGGVYMTAVSALALEWRFEESRNVLIDMLDCKRKPDMITYRTLMEEMCRAGRAEDAFE 343
Query: 382 LLKELQN--KNLIDGYTYTKLLDVL 404
LL+EL+ + +D Y++LLD L
Sbjct: 344 LLEELKERKRGPLDQRMYSELLDGL 368
>gi|297724555|ref|NP_001174641.1| Os06g0184866 [Oryza sativa Japonica Group]
gi|55773919|dbj|BAD72524.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255676790|dbj|BAH93369.1| Os06g0184866 [Oryza sativa Japonica Group]
Length = 388
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 177/325 (54%), Gaps = 8/325 (2%)
Query: 85 ALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMT 144
A D QF V+ L P F +L ++ + DP + L LF WA+ +P FRH ++Y
Sbjct: 47 APPDEQFAAWVARLRPGFTAGDLAEAISSERDPDLALALFRWAALRPGFRHAPASYLAAL 106
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKL-SRAVYVFKYMKN- 201
+ + +++V +LA CG + L+N + F R+L A +F M++
Sbjct: 107 TAASSGRRPAAAENLVYDVLA--GACGPDLRLFNACLRFCCARRRLFPLAFDMFNKMRSL 164
Query: 202 SRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMI 261
+ CRP + +Y +L T+ + R + + VY+ +R L +QM G+ PD F LN +I
Sbjct: 165 PASAACRPDVETYTLLLTSVVRRVRRPPASMVYLHAVRSLSRQMKASGVVPDTFLLNLII 224
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
K Y V+DAL++F +M +Y N F+Y Y++ + +GRT E + KGF
Sbjct: 225 KAYARCLEVDDALKVFREM-PLYGCEANEFTYGYIVKAMFQKGRTDKGMVYFREAREKGF 283
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
VP+ Y + VSALAL EE+ L +M++ +R D ITYRT+++E+CR GRA +A +
Sbjct: 284 VPTGGVYMTAVSALALEWRFEESRNVLIDMLDCKRKPDMITYRTLMEEMCRAGRAEDAFE 343
Query: 382 LLKELQN--KNLIDGYTYTKLLDVL 404
LL+EL+ + +D Y++LLD L
Sbjct: 344 LLEELKERKRGPLDQRMYSELLDGL 368
>gi|224065417|ref|XP_002301807.1| predicted protein [Populus trichocarpa]
gi|222843533|gb|EEE81080.1| predicted protein [Populus trichocarpa]
Length = 325
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 177/320 (55%), Gaps = 8/320 (2%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+TQF L P F ++ + Q DP + L++F W ++Q ++H+ TY + + L
Sbjct: 6 ETQFETWTQNLKPGFTPTDVDTAIRAQSDPDLALDIFRWTAQQRNYKHNHITYLTVIKIL 65
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL--SRAVYVFKYMKNSRNL 205
+ + Y++ + ++ +++A LYN++I F RKL +RA ++K M S +
Sbjct: 66 ISGRRYRQAETLIEEVIAGACEISV-PLYNSMIRFCC-GRKLLFNRAFDIYKKMLKSED- 122
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
C+P++ +Y +LF + L R + +VY+ ++ L KQM G+ PD F LN +IK Y
Sbjct: 123 -CKPTLDTYTLLFNSLLRRFNKLNVCYVYLHAVKSLTKQMKASGVIPDTFVLNMIIKAYA 181
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V++A+R+F +MG+ Y N++SY YL+ GLC +GR+ EMK KG VPS
Sbjct: 182 KCLEVDEAVRVFREMGL-YGCEANAYSYSYLVKGLCGKGRSGQGLGFYKEMKGKGLVPSG 240
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y L+ +L + EE + +++M+ D +TYRTVL+ +CR G +A +LL+E
Sbjct: 241 STYMILICSLGMERRFEEAIGVVFDMLGDSMSPDLLTYRTVLEGLCREGMVDKAFELLEE 300
Query: 386 LQNKNLIDG-YTYTKLLDVL 404
+ K+ G Y LL+ L
Sbjct: 301 WRKKDGFMGEKNYKSLLNGL 320
>gi|225458862|ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Vitis vinifera]
Length = 393
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 180/331 (54%), Gaps = 8/331 (2%)
Query: 77 RSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHD 136
+S P QF + L P F+ ++ + Q DP + L++F W +Q +RH+
Sbjct: 62 QSPNPKTPTPLQMQFESWIHMLKPGFSPSDVDEALRAQSDPDLALDIFRWTGQQRGYRHN 121
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKL-SRAVY 194
TY M + + K ++ + ++ +++A C LYN+II F + L +RA
Sbjct: 122 HVTYLTMIKIAVSGKRFRHAETLIEEVIA--GACSVSVPLYNSIIRFCCGRKFLFNRAFD 179
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
V+K M NS + C+PS+ +Y +L A L + + +VY+ +R L KQM G+ PD
Sbjct: 180 VYKKMLNSED--CKPSLETYTLLLNALLRKFNKLTVCYVYLHAVRSLTKQMKVSGVIPDT 237
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
F+LN +IK Y V++A+R+F +MG+ Y PN+++Y Y+ +GLC +GR
Sbjct: 238 FALNMIIKAYSKCLEVDEAIRVFREMGL-YGCEPNAYTYGYIANGLCEKGRVSQGLGFYR 296
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM+ K VPSS +Y L+ +L++ EE K L++M+ D +TY+T+L+ + R G
Sbjct: 297 EMRSKDLVPSSSTYVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGLSREG 356
Query: 375 RAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+ +A +LL++L+ K+ G TY L+ L
Sbjct: 357 KCNDAFELLEDLRKKDAWMGEKTYKTLVKGL 387
>gi|297831416|ref|XP_002883590.1| hypothetical protein ARALYDRAFT_899142 [Arabidopsis lyrata subsp.
lyrata]
gi|297329430|gb|EFH59849.1| hypothetical protein ARALYDRAFT_899142 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 176/317 (55%), Gaps = 6/317 (1%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+TQF + L P F N ++ + Q DP + L++F W S+Q ++H+ YH M ++
Sbjct: 59 ETQFETWIQNLKPGFTNSDVVTALRAQSDPDLALDIFRWTSQQRGYKHNHEAYHTMIKQA 118
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL-SRAVYVFKYMKNSRNLE 206
K + ++ ++ +++A LYN II F + L +RA V Y K R+ +
Sbjct: 119 ITGKRNKFVETLIEEVIAGACEMSV-PLYNCIIRFCCGRKFLFNRAFDV--YNKMLRSED 175
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
+P + +Y +L ++ L R + +VY+ +R L KQM + G+ PD F LN +IK Y
Sbjct: 176 SKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSSGVIPDTFVLNMIIKAYAK 235
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V++A+R++ +M + Y PN+++Y YLI G+C +GR EM+ KG VP+
Sbjct: 236 CLEVDEAIRVYKEMAL-YGSEPNAYTYSYLIKGVCEKGRLGQGLGFYKEMRSKGMVPNGS 294
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
Y L+ +L++ + E V+ +++M+ D +TY TVL E+CR GR GEA++L++E
Sbjct: 295 CYMVLICSLSMERRLNEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGGEALELVEEW 354
Query: 387 QNKNLIDG-YTYTKLLD 402
+ ++ + G Y L+D
Sbjct: 355 KKRDPVMGERNYRTLMD 371
>gi|186510399|ref|NP_189158.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273968|sp|Q9LSF5.1|PP254_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g25210, mitochondrial; Flags: Precursor
gi|9294178|dbj|BAB02080.1| unnamed protein product [Arabidopsis thaliana]
gi|332643472|gb|AEE76993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 379
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 176/317 (55%), Gaps = 6/317 (1%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+TQF + L P F N ++ + Q DP + L++F W ++Q ++H+ YH M ++
Sbjct: 59 ETQFETWIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQA 118
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL-SRAVYVFKYMKNSRNLE 206
K ++ ++ +++A LYN II F + L +RA V Y K R+ +
Sbjct: 119 ITGKRNNFVETLIEEVIAGACEMSV-PLYNCIIRFCCGRKFLFNRAFDV--YNKMLRSDD 175
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
+P + +Y +L ++ L R + +VY+ +R L KQM ++G+ PD F LN +IK Y
Sbjct: 176 SKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAK 235
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V++A+R+F +M + Y PN+++Y YL+ G+C +GR EM+ KG VP+
Sbjct: 236 CLEVDEAIRVFKEMAL-YGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGS 294
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
Y L+ +L++ ++E V+ +++M+ D +TY TVL E+CR GR EA+++++E
Sbjct: 295 CYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEW 354
Query: 387 QNKNLIDG-YTYTKLLD 402
+ ++ + G Y L+D
Sbjct: 355 KKRDPVMGERNYRTLMD 371
>gi|125596282|gb|EAZ36062.1| hypothetical protein OsJ_20372 [Oryza sativa Japonica Group]
Length = 335
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 164/322 (50%), Gaps = 33/322 (10%)
Query: 85 ALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMT 144
A D QF V+ L P F +L ++ + DP + L LF WA+ +P FRH ++Y
Sbjct: 25 APPDEQFAAWVARLRPGFTAGDLAEAISSERDPDLALALFRWAALRPGFRHAPASY---- 80
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
L A L SF A ++Y L+R + +
Sbjct: 81 --LAA--------------LNAASFGRRPAAAENLVYDV-----LARGMRSLPA-----S 114
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
CRP + +Y +L T+ + R + + VY+ +R L +QM G+ PD F LN +IK Y
Sbjct: 115 AACRPDVETYTLLLTSVVRRVRRPPASMVYLHAVRSLSRQMKASGVVPDTFLLNLIIKAY 174
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
V+DAL++F +M + Y N F+Y Y++ + +GRT E + KGFVP+
Sbjct: 175 ARCLEVDDALKVFREMPL-YGCEANEFTYGYIVKAMFQKGRTDKGMVYFREAREKGFVPT 233
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
Y + VSALAL EE+ L +M++ +R D ITYRT+++E+CR GRA +A +LL+
Sbjct: 234 GGVYMTAVSALALEWRFEESRNVLIDMLDCKRKPDMITYRTLMEEMCRAGRAEDAFELLE 293
Query: 385 ELQN--KNLIDGYTYTKLLDVL 404
EL+ + +D Y++LLD L
Sbjct: 294 ELKERKRGPLDQRMYSELLDGL 315
>gi|147770286|emb|CAN63164.1| hypothetical protein VITISV_018476 [Vitis vinifera]
Length = 125
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 100/140 (71%), Gaps = 20/140 (14%)
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
MGVVYN LPNS SYDYLIHGLCAQ RT NAR+LC+EMK KGFVPS
Sbjct: 1 MGVVYNCLPNSHSYDYLIHGLCAQDRTNNARKLCNEMKGKGFVPS--------------- 45
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTK 399
+V+E V LWEM EKQR DFITY+TVLD+ICR+GR +AM LLKELQ K+L+DG+TY K
Sbjct: 46 KVDEAVNYLWEMTEKQRSADFITYQTVLDQICRQGRTQDAMSLLKELQVKDLLDGHTYQK 105
Query: 400 LLDVLEDDFG-----NSIRH 414
LL +LE +FG N RH
Sbjct: 106 LLSLLEQEFGKLNNQNQFRH 125
>gi|22655262|gb|AAM98221.1| putative protein [Arabidopsis thaliana]
gi|30102838|gb|AAP21337.1| At5g27300 [Arabidopsis thaliana]
Length = 129
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 99/129 (76%)
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
M VVY PNSF+YDYLIHGLCAQGRT N REL EMK KGFVP+ KSYNSLV+A AL+G
Sbjct: 1 MSVVYGCEPNSFTYDYLIHGLCAQGRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSG 60
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTK 399
E+++ VK LWEMIE R VDFI+YRT++DE CR+G+ EA +LL+ L+ K L+D + K
Sbjct: 61 EIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDIDSDDK 120
Query: 400 LLDVLEDDF 408
L++VL D
Sbjct: 121 LVNVLHKDL 129
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P+ +Y+ L ++G+ R L +M G P+ S NS++ + L
Sbjct: 7 CEPNSFTYDYLIHGLCAQGRTI--------NTRELLSEMKGKGFVPNGKSYNSLVNAFAL 58
Query: 267 SNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
S ++DA++ +M G V +++ SY L+ C +G+ A L + ++ K V
Sbjct: 59 SGEIDDAVKCLWEMIENGRVVDFI----SYRTLVDESCRKGKYDEATRLLEMLREKQLVD 114
Query: 324 SSKSYNSLVSAL 335
S + LV+ L
Sbjct: 115 ID-SDDKLVNVL 125
>gi|302142186|emb|CBI19389.3| unnamed protein product [Vitis vinifera]
Length = 365
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 165/329 (50%), Gaps = 32/329 (9%)
Query: 77 RSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHD 136
+S P QF + L P F+ ++ + Q DP + L++F W +Q +RH+
Sbjct: 62 QSPNPKTPTPLQMQFESWIHMLKPGFSPSDVDEALRAQSDPDLALDIFRWTGQQRGYRHN 121
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
TY M + + K ++ + ++ +++A C
Sbjct: 122 HVTYLTMIKIAVSGKRFRHAETLIEEVIA--GACSK------------------------ 155
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M NS + C+PS+ +Y +L A L + + +VY+ +R L KQM G+ PD F+
Sbjct: 156 --MLNSED--CKPSLETYTLLLNALLRKFNKLTVCYVYLHAVRSLTKQMKVSGVIPDTFA 211
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
LN +IK Y V++A+R+F +MG+ Y PN+++Y Y+ +GLC +GR EM
Sbjct: 212 LNMIIKAYSKCLEVDEAIRVFREMGL-YGCEPNAYTYGYIANGLCEKGRVSQGLGFYREM 270
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
+ K VPSS +Y L+ +L++ EE K L++M+ D +TY+T+L+ + R G+
Sbjct: 271 RSKDLVPSSSTYVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGLSREGKC 330
Query: 377 GEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+A +LL++L+ K+ G TY L+ L
Sbjct: 331 NDAFELLEDLRKKDAWMGEKTYKTLVKGL 359
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 162/375 (43%), Gaps = 71/375 (18%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
V LPP F ++L + Q D + L +FNWASKQP F +S Y + RKLG A ++
Sbjct: 55 VHHLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFE 114
Query: 155 EMDDVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
M V+ +M G E ++ + + + V + K M++ + +P
Sbjct: 115 YMRRVLEEM----KLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRI--KPDT 168
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIR---------------------------CLFKQ 244
R YN+L + K + + +R + ++
Sbjct: 169 RFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEE 228
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------------------------ 280
M + G+ PD + ++++GYI +++ ALRI QM
Sbjct: 229 MPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGR 288
Query: 281 ----------GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
V + P+ F+Y+ L++GLC G K+A E+ D M G P +YNS
Sbjct: 289 IDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNS 348
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+S L GE+EE VK L +M+ + + +TY ++ +C+ R EA ++ + L +K
Sbjct: 349 LISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408
Query: 391 LI-DGYTYTKLLDVL 404
++ D T+ L+ L
Sbjct: 409 ILPDVCTFNSLIQGL 423
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 142/321 (44%), Gaps = 56/321 (17%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF--CGTEALYNTIIYFFAEARKL 189
R RHD ST++I+ + L A ++ + M PS+ E + TI+ + E L
Sbjct: 198 RIRHDVSTFNILIKALCKA---HQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNL 254
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK----------------------- 226
A+ + + M C + + N+L F +G+
Sbjct: 255 DGALRIKEQMVE---YGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTY 311
Query: 227 NTYINHV--------YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
NT +N + ME + M+ G++PDI++ NS+I G + +A++I
Sbjct: 312 NTLVNGLCKIGHAKHAMEVV----DAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILD 367
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
QM V + PN+ +Y+ +I LC + R A E+ + KG +P ++NSL+ L L+
Sbjct: 368 QM-VSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLS 426
Query: 339 GEVEETVKNLWEMIEKQ-RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ---------- 387
+ + EM K RP +F TY ++D +C + EA+ LLKE++
Sbjct: 427 SNHKSAMDLFEEMKGKGCRPDEF-TYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVI 485
Query: 388 NKNLIDGYTYTKLLDVLEDDF 408
LIDG+ K ++ E+ F
Sbjct: 486 YNTLIDGFCKNKRIEEAEEIF 506
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 121/257 (47%), Gaps = 13/257 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+A TY+ + L E ++ ++L + +N++I + A+ +
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIA-RLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDL 435
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ MK CRP +YN+L + S K +E L K+M +G ++
Sbjct: 436 FEEMKGKG---CRPDEFTYNMLIDSLCSSRK--------LEEALNLLKEMELNGCARNVV 484
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
N++I G+ + + +A IF +M + +S +Y+ LI GLC R ++A +L D+
Sbjct: 485 IYNTLIDGFCKNKRIEEAEEIFDEMEL-QGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQ 543
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +G P +YNSL++ G++++ + M D +TY T++ +C+ GR
Sbjct: 544 MIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGR 603
Query: 376 AGEAMKLLKELQNKNLI 392
A +LL+ +Q K ++
Sbjct: 604 VQVASRLLRSIQMKGMV 620
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 16/265 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRA 192
R D TY+++ L +++ +E +++ +M + C +YNT+I F + +++ A
Sbjct: 445 RPDEFTYNMLIDSLCSSRKLEEALNLLKEM--ELNGCARNVVIYNTLIDGFCKNKRIEEA 502
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F M+ R S+ +YN L + +E L QM+ +G+ P
Sbjct: 503 EEIFDEMELQGV--SRDSV-TYNTLIDGLCKSKR--------VEDAAQLMDQMIMEGLRP 551
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D F+ NS++ + + + A I M P+ +Y LI GLC GR + A L
Sbjct: 552 DKFTYNSLLTHFCKTGDIKKAADIVQTM-TSSGCNPDIVTYATLISGLCKAGRVQVASRL 610
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++ KG V + +YN ++ AL E ++ EM++K P D ITY+ V +C
Sbjct: 611 LRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCN 670
Query: 373 RGRA-GEAMKLLKELQNKNLIDGYT 396
G GEA+ E+ + I ++
Sbjct: 671 GGGPIGEAVDFTVEMIERGNIPEFS 695
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 151/297 (50%), Gaps = 24/297 (8%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCG 171
Q D L+ +E+F AS+QP F+H STYH + KLG A+ ++ M+ ++ QM P
Sbjct: 110 QTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPY--- 166
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T L+ II + E + A+ F M P + +N+L I
Sbjct: 167 TPGLFVDIIEIYGEVGMPNEAIKAFHQM---LEFGYEPLAKHFNVLLIVL--------IE 215
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF---HQMGVVYNYLP 288
H +ET LFK++ GI P+ + N +I+ + S+ ++ A +F H+ G + P
Sbjct: 216 HKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCI----P 271
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ +Y L+ GLC + + K A + DEM KG+VP + +YN+L+++L + E + L
Sbjct: 272 DVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLL 331
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
+M D I Y TV+ CR GRA +A ++L+++ +N L + +Y L++ L
Sbjct: 332 SKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGL 388
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + KLS A ++F M C P + +Y+IL + + +
Sbjct: 241 YNILIRAHCHSDKLSHAYFLFNKMHKQ---GCIPDVETYSILMQGLCRKSQ--------V 289
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+T + +M+N G PD + N+++ ++ +A R+ +M V+ P+ +Y+
Sbjct: 290 KTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVM-GCNPDVINYNT 348
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C +GR +A ++ +M G +P++ SY +LV+ L G+ +E + EMI
Sbjct: 349 VITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNG 408
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
Y ++ +C G+ GEA ++L + + L
Sbjct: 409 FIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTL 444
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q DPL+ E+F++AS+QP F+H S+Y I+ KLG AK + +DD++ L + ++ T
Sbjct: 77 QSDPLLAKEIFDYASRQPNFQHSYSSYLILILKLGRAKYFSFIDDLLTD-LKSKNYPVTP 135
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
L++ II + EA +A+ +F + +C PS + N + +S +
Sbjct: 136 TLFSYIINIYGEANLPDKALKIFYTI---LKFDCNPSPKHLNGILEILVS-------HQN 185
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
Y++ LFK + P+ S N +I+ + L+ ++ A +F+QM + +P+ SY
Sbjct: 186 YIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQM-FKRDVMPDVESY 244
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
L+ LC + + A +L ++M KG+VP + SY +L+++L ++ E K L M
Sbjct: 245 RILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKV 304
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
K D I Y TV+ CR GRA +A K+L+++++
Sbjct: 305 KGCNPDIIHYNTVILGFCREGRAMDACKVLEDMES 339
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 16/258 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+ +Y+I+ R + NQM E+ Y ++ +++ AV +
Sbjct: 205 NTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVES-YRILMQALCRKSQVNGAVDL 263
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M N + P SY L + + K + Y L +M G PDI
Sbjct: 264 LEDMLNKGYV---PDALSYTTLLNSLCRKKK---LREAYK-----LLCRMKVKGCNPDII 312
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
N++I G+ DA ++ M +PN SY L+ GLC QG A+ +E
Sbjct: 313 HYNTVILGFCREGRAMDACKVLEDMES-NGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEE 371
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG- 374
M KGF P N+L+ G++EE + E+++ T+ ++ IC
Sbjct: 372 MMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRICEVDD 431
Query: 375 --RAGEAMKLLKELQNKN 390
R GE + +K+++ K
Sbjct: 432 LQRIGEILDKVKKVELKG 449
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+F Y N + SY+ L G+ Y + +++ + K N + P +
Sbjct: 86 IFDYASRQPNFQ-----HSYSSYLILILKLGRAKYFS--FIDDLLTDLKSK-NYPVTPTL 137
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA-QGRTKNARELC 313
FS +I Y +N + AL+IF+ + + ++ P+ + ++ L + Q K A +L
Sbjct: 138 FSY--IINIYGEANLPDKALKIFYTI-LKFDCNPSPKHLNGILEILVSHQNYIKPAFDLF 194
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+ P++KSYN L+ A LNG++ +M ++ D +YR ++ +CR+
Sbjct: 195 KDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRK 254
Query: 374 GRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ A+ LL+++ NK + D +YT LL+ L
Sbjct: 255 SQVNGAVDLLEDMLNKGYVPDALSYTTLLNSL 286
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 171/377 (45%), Gaps = 53/377 (14%)
Query: 75 GKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELF---NWASKQP 131
GK + +DTQ + P R L +++ LQ+DP + L+LF N +S +P
Sbjct: 53 GKSRNSTGHRETNDTQMKTQKPISPFR-----LSSLLRLQKDPTLALQLFLNPNPSSSEP 107
Query: 132 R--FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL 189
FR+ +Y ++ KLG AKM+ EM++++ Q+ F E ++ +I F+ A
Sbjct: 108 PKPFRYSLLSYDLIISKLGRAKMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLP 167
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY--------------- 234
RA VF+ + + R C+ +++S N L A L + + V+
Sbjct: 168 DRAFQVFERIPSFR---CKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNYGSPDACTFN 224
Query: 235 -----------METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
++ + +F +M G++P++ + ++I G L++ + +ALR+ M V
Sbjct: 225 ILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKV 284
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
Y PN+ Y LI G C G A +L +EM S Y++L+SAL +G EE
Sbjct: 285 YMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEE 344
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK---------NLIDG 394
L EM E D +TY +++ C+ A +++ E+ K N I G
Sbjct: 345 VSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIG 404
Query: 395 Y-----TYTKLLDVLED 406
+ K +D+LED
Sbjct: 405 WLCKEGKLDKAMDLLED 421
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 174 ALYNTII-YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
A+Y+T+I F RK + + + +N C+P +YN + N +
Sbjct: 327 AVYSTLISALFKHGRKEEVSDILREMGENG----CKPDTVTYNAII--------NGHCKE 374
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+E+ + +MV G +PD+FS N++I ++ A+ + M P+ S
Sbjct: 375 NDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPR-RGCPPDVLS 433
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
Y + GLC + K A + DEM KG+VP ++S N LV L
Sbjct: 434 YRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRL 476
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 168/380 (44%), Gaps = 78/380 (20%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ + L P F +L + + +ED + LF WASKQP F+ +S + + KLG A +
Sbjct: 46 SATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEF 105
Query: 154 QEMDDVVNQMLATPSFCGTEA------------LYNTIIYFFAEARKLSRAV-------- 193
M D++ +M + S ++ LYN I+ F +A ++ V
Sbjct: 106 DAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQ-FVDAMEVEFGVVANTHFYN 164
Query: 194 YVFKYMKNSRNLE-------------CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
++ + + L+ RP + ++NIL A L R + ME
Sbjct: 165 FLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKA-LCRAHQIRPAILLME---- 219
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNH------------------------------- 269
+M + G+ PD + ++++G+I +
Sbjct: 220 ---EMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFC 276
Query: 270 ----VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ +ALR +M + + P+ ++++ L++GL G K+A E+ D M R+GF P
Sbjct: 277 KEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDI 336
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+YNSL+S L GEV+E VK L +MIE+ + +TY T++ +C+ + EA KL
Sbjct: 337 YTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALV 396
Query: 386 LQNKNLI-DGYTYTKLLDVL 404
L K ++ D TY L+ L
Sbjct: 397 LTGKGILPDVCTYNSLIQGL 416
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 16/225 (7%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
P C YN++I +R + A+ ++K MK C P +YN+L + RGK
Sbjct: 404 PDVC----TYNSLIQGLCLSRNHTVAMELYKEMKTKG---CHPDEFTYNMLIDSLCFRGK 456
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
++ L K+M G ++ + N++I G+ + + +A IF QM +
Sbjct: 457 --------LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMEL-QGV 507
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
NS +Y+ LI GLC R + A +L D+M +G P +YNSL++ G++++
Sbjct: 508 SRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAAD 567
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ M D +TY T++ +C+ GR A KLL+ +Q K +
Sbjct: 568 IVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGI 612
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 23/304 (7%)
Query: 98 LPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD 157
LP L + L + V +EL+ K D TY+++ L QE
Sbjct: 403 LPDVCTYNSLIQGLCLSRNHTVAMELYK-EMKTKGCHPDEFTYNMLIDSLCFRGKLQEAL 461
Query: 158 DVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMK---NSRNLECRPSIRS 213
+++ +M S C + YNT+I F + ++++ A +F M+ SRN S+ +
Sbjct: 462 NLLKEMEV--SGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRN-----SV-T 513
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN L + +E L QM+ +G+ PD F+ NS++ + + + A
Sbjct: 514 YNTLIDGLCKSER--------VEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKA 565
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
I M P+ +Y LI GLC GR + A +L ++ KG + +YN ++
Sbjct: 566 ADIVQTMAS-DGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQ 624
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA-GEAMKLLKELQNKNLI 392
AL +E V+ EMIEK D +TY+ V +C+ G GEA+ + E+ + +
Sbjct: 625 ALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYV 684
Query: 393 DGYT 396
++
Sbjct: 685 PEFS 688
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 43/231 (18%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P ++N+L K ++ H + M+ +G +PDI++ NS+I G
Sbjct: 299 PDKYTFNMLVNGL---SKTGHVKHALE-----VMDMMLREGFDPDIYTYNSLISGLCKLG 350
Query: 269 HVNDALRIFHQM--------GVVYN--------------------------YLPNSFSYD 294
V++A+++ +QM V YN LP+ +Y+
Sbjct: 351 EVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYN 410
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GLC A EL EMK KG P +YN L+ +L G+++E + L EM
Sbjct: 411 SLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVS 470
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ ITY T++D C+ R EA ++ +++ + + + TY L+D L
Sbjct: 471 GCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGL 521
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 20/255 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + K E +++ +QM YNT+I ++ ++ A +
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQM-ELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQ 536
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M RP +YN L T F G ++ + + M +DG EPDI +
Sbjct: 537 MIMEG---LRPDKFTYNSLLTYFCKAGD--------IKKAADIVQTMASDGCEPDIVTYG 585
Query: 259 SMIKGYILSNHVNDA---LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
++I G + V A LR G+ N P++ Y+ +I L + R+K A L E
Sbjct: 586 TLIAGLCKAGRVEAATKLLRTIQMKGI--NLTPHA--YNPVIQALFRRKRSKEAVRLFRE 641
Query: 316 MKRKGFVPSSKSYNSLVSALALNG-EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M K P + +Y + L G + E V + EM+E+ +F ++ + + +
Sbjct: 642 MIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLA 701
Query: 375 RAGEAMKLLKELQNK 389
G +KL+ + K
Sbjct: 702 MVGTLIKLIDMVMEK 716
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 15/239 (6%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
E+F+ Q R ++ TY+ + L ++ +E +++QM+ + YN+++
Sbjct: 497 EIFDQMELQGVSR-NSVTYNTLIDGLCKSERVEEASQLMDQMI-MEGLRPDKFTYNSLLT 554
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+F +A + +A + + M + C P I +Y L G+ +E L
Sbjct: 555 YFCKAGDIKKAADIVQTMASDG---CEPDIVTYGTLIAGLCKAGR--------VEAATKL 603
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+ + GI + N +I+ +A+R+F +M + P++ +Y + GLC
Sbjct: 604 LRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREM-IEKAEAPDAVTYKIVFRGLC 662
Query: 302 -AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
G A + EM +G+VP S+ L L V +K + ++EK + D
Sbjct: 663 QGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSD 721
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 21/257 (8%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
KMY+ D ++ +M+A C E YN +I F + +S A+ VF M+ RP
Sbjct: 207 GKMYKA-DAILKEMVA-KGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQ---GLRP 261
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
++ +YNIL S GK ++ L QMV+ +EP++ + N +I G+ +
Sbjct: 262 NVVTYNILINGLCSDGK--------VDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKT 313
Query: 270 VNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
VN+A+ +F+ M GV PN+ +Y LI C GR ++A L + M +G P
Sbjct: 314 VNEAINLFNDMEKQGVD----PNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVS 369
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN L++ L G+V+ + EM+ K+ D +TY ++D +C++G + +A+KLL E+
Sbjct: 370 TYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEM 429
Query: 387 QNKNLIDGY-TYTKLLD 402
K L + TY L+D
Sbjct: 430 FEKGLNPSHVTYNTLMD 446
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 141/348 (40%), Gaps = 58/348 (16%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM------------ 163
DP + L F W+ K+ + H + L K Y ++ +++
Sbjct: 11 DPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYSVSAI 70
Query: 164 -----LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
++ SFC L + ++ F K+ R F+ K + + + S+ S N L
Sbjct: 71 FHAISMSGDSFCVNSILADMLVLAFVRNLKILRG---FEAFKRAGDYGFKLSLISCNPLL 127
Query: 219 TAFLSRGKNTYINHVYMETIR-------CLFKQMVND--------------------GIE 251
+ + +N + VY E I+ F +VN G+
Sbjct: 128 SGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVS 187
Query: 252 PDIFSLNSMIKGYILSNHVNDALR---IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
P++ + N++I GY + + I +M V PN +Y+ LI G C
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAILKEM-VAKGICPNEVTYNILIDGFCKDENVSG 246
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A + EM+R+G P+ +YN L++ L +G+V+E V +M+ + +T+ +++
Sbjct: 247 AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLIN 306
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDV------LEDDFG 409
C+ EA+ L +++ + + + TYT L+D +ED F
Sbjct: 307 GFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFA 354
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 134/293 (45%), Gaps = 22/293 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT---PSFCGTEALYN 177
+ +F +Q R + TY+I+ L + E + +QM+++ P+ +N
Sbjct: 248 MRVFGEMQRQG-LRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNV----VTHN 302
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
+I F + + ++ A+ +F M+ P+ +Y L A+ G+ ME
Sbjct: 303 VLINGFCKNKTVNEAINLFNDMEKQ---GVDPNAMTYTTLIDAYCKDGR--------MED 351
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
L+ M++ GI P++ + N +I G V A + ++M V + +Y+ LI
Sbjct: 352 AFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEM-VSKKLSADVVTYNILI 410
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
LC +G ++ A +L DEM KG PS +YN+L+ G + + M K +
Sbjct: 411 DSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQ 470
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL--DVLEDDF 408
+ +T+ ++ C +GR +A LL E+ + L+ T +++ +++E F
Sbjct: 471 ANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGF 523
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 185/391 (47%), Gaps = 36/391 (9%)
Query: 18 TFNKHLCCTNSSHNSKTLSNYYLSQTQINPHLKLSSNAILCSCYSAIALSRSSSRGVGKR 77
+F+ H C T + T+ + + Q K S ++L + +I+ RS+S VG
Sbjct: 8 SFSSHCCATTAGSKMMTVCHRRVQQP-----FKPRSTSLLH--FHSISAVRSASTAVGAA 60
Query: 78 -------------SKADSKPALDDT-QFRCAVSELPPRFNNEELCNVMTLQEDPLVCLEL 123
+ DSK L + + P R + + + ++++ Q++ + L++
Sbjct: 61 VDPFTDHPSHHHLAAVDSKSTLLKSYTVTPPIKPWPQRLSPKRVVSMISRQQNLDLALQI 120
Query: 124 FNWASKQPR-FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
F+ A K R F H+ TY M KL A+ ++ M+ +++Q+ + CG E L+ T+I
Sbjct: 121 FDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCG-ENLFITVIRN 179
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
+ A + A+ F + + +PS+RS+N L NT + + + + +F
Sbjct: 180 YGFAGRPKLAIRTFLRIPS---FGLQPSVRSFNTLL--------NTLVQNKRFDLVHLMF 228
Query: 243 KQMVND-GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
K GI P++F+ N ++K N ++ A+R+ +M + ++PN +Y ++ G
Sbjct: 229 KNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAM-GFIPNVVTYTTILGGYV 287
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
++G AR + E+ +G+VP +Y L+ G + VK + EM E + + +
Sbjct: 288 SKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDV 347
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
TY +++ C+ ++GE + LL ++ K I
Sbjct: 348 TYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI 378
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L+K+++ PD +++I V +A ++F + +P++ +Y+ LI G+
Sbjct: 403 LWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFE--KGSIPSTLTYNALIAGM 460
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
C G A L D M KG VP++ +YN L+ G E ++ + EM++
Sbjct: 461 CEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLD 513
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I+ Y + A+R F ++ + P+ S++ L++ L R + ++
Sbjct: 175 TVIRNYGFAGRPKLAIRTFLRI-PSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRK 233
Query: 319 K-GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
K G VP+ + N LV AL +++ ++ L EM + +TY T+L +G
Sbjct: 234 KFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMV 293
Query: 378 EAMKLLKELQNKNLI-DGYTYTKLLD 402
A ++ E+ ++ + D TYT L+D
Sbjct: 294 GARRVFGEILDRGWVPDPTTYTILMD 319
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 185/391 (47%), Gaps = 36/391 (9%)
Query: 18 TFNKHLCCTNSSHNSKTLSNYYLSQTQINPHLKLSSNAILCSCYSAIALSRSSSRGVGKR 77
+F+ H C T + T+ + + Q K S ++L + +I+ RS+S VG
Sbjct: 8 SFSSHCCATTAGSKMMTVCHRRVQQP-----FKPRSTSLLH--FHSISAVRSASTAVGAA 60
Query: 78 -------------SKADSKPALDDT-QFRCAVSELPPRFNNEELCNVMTLQEDPLVCLEL 123
+ DSK L + + P R + + + ++++ Q++ + L++
Sbjct: 61 VDPFTDHPSHHHLAAVDSKSTLLKSYTVTPPIKPWPQRLSPKRVVSMISRQQNLDLALQI 120
Query: 124 FNWASKQPR-FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
F+ A K R F H+ TY M KL A+ ++ M+ +++Q+ + CG E L+ T+I
Sbjct: 121 FDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCG-ENLFITVIRN 179
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
+ A + A+ F + + +PS+RS+N L NT + + + + +F
Sbjct: 180 YGFAGRPKLAIRTFLRIPS---FGLQPSVRSFNTLL--------NTLVQNKRFDLVHLMF 228
Query: 243 KQMVND-GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
K GI P++F+ N ++K N ++ A+R+ +M + ++PN +Y ++ G
Sbjct: 229 KNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAM-GFIPNVVTYTTILGGYV 287
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
++G AR + E+ +G+VP +Y L+ G + VK + EM E + + +
Sbjct: 288 SKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDV 347
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
TY +++ C+ ++GE + LL ++ K I
Sbjct: 348 TYGVIIEAYCKEKKSGEVLNLLDDMLEKKYI 378
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L+K+++ PD +++I V +A ++F + +P++ +Y+ LI G+
Sbjct: 403 LWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFE--KGSIPSTLTYNALIAGM 460
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
C G A L D M KG VP++ +YN L+ G E ++ + EM++
Sbjct: 461 CEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLD 513
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I+ Y + A+R F ++ + P+ S++ L++ L R + ++
Sbjct: 175 TVIRNYGFAGRPKLAIRTFLRIPS-FGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRK 233
Query: 319 K-GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
K G VP+ + N LV AL +++ ++ L EM + +TY T+L +G
Sbjct: 234 KFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMV 293
Query: 378 EAMKLLKELQNKNLI-DGYTYTKLLD 402
A ++ E+ ++ + D TYT L+D
Sbjct: 294 GARRVFGEILDRGWVPDPTTYTILMD 319
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 143/274 (52%), Gaps = 14/274 (5%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q DPL+ E+F++AS+QP FRH S++ I+ KLG + + +DDV+ + ++ + T
Sbjct: 61 QSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSS-GYPLTG 119
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS-RGKNTYINH 232
++ +I +AEA+ + + F M P + N + +S RG
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKM---LEFNFTPQPKHLNRILDVLVSHRG------- 169
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
Y++ LFK G+ P+ S N +++ + L++ ++ A ++F +M + + +P+ S
Sbjct: 170 -YLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM-LERDVVPDVDS 227
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI G C +G+ A EL D+M KGFVP SY +L+++L ++ E K L M
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
K D + Y T++ CR RA +A K+L ++
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA-QGRTKNARELCDEMKR 318
+IK Y + L F++M + +N+ P + ++ L + +G + A EL +
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKM-LEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRL 183
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G +P+++SYN L+ A LN ++ + +M+E+ D +Y+ ++ CR+G+
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 379 AMKLLKELQNKNLI-DGYTYTKLLDVL 404
AM+LL ++ NK + D +YT LL+ L
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSL 270
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 143/274 (52%), Gaps = 14/274 (5%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q DPL+ E+F++AS+QP FRH S++ I+ KLG + + +DDV+ + ++ + T
Sbjct: 61 QSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSS-GYPLTG 119
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS-RGKNTYINH 232
++ +I +AEA+ + + F M P + N + +S RG
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKM---LEFNFTPQPKHLNRILDVLVSHRG------- 169
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
Y++ LFK G+ P+ S N +++ + L++ ++ A ++F +M + + +P+ S
Sbjct: 170 -YLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM-LERDVVPDVDS 227
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI G C +G+ A EL D+M KGFVP SY +L+++L ++ E K L M
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
K D + Y T++ CR RA +A K+L ++
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA-QGRTKNARELCDEMKR 318
+IK Y + L F++M + +N+ P + ++ L + +G + A EL +
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKM-LEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRL 183
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G +P+++SYN L+ A LN ++ + +M+E+ D +Y+ ++ CR+G+
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 379 AMKLLKELQNKNLI-DGYTYTKLLDVL 404
AM+LL ++ NK + D +YT LL+ L
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSL 270
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 139/273 (50%), Gaps = 12/273 (4%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q DPL+ E+F+ AS QP F+H S++HI+ KLG A+ + M D++ + L + +
Sbjct: 24 QSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMR-LKSEQYSINP 82
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+L++ II + EA +A+ F M +P + N L +S YI
Sbjct: 83 SLFSDIIEIYGEANLPDQALKTFHSM---LQFHSKPLPKHLNXLLQLLVSH--RNYIRPA 137
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ LFK G+ PD S N ++ + + ++ A +F+QM + P+ SY
Sbjct: 138 FD-----LFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQM-FKRDVAPDVESY 191
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
L+ GLC + + A +L ++M KG+VP + SY +L+++L +++E K L M
Sbjct: 192 RILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKV 251
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
K D + Y TV+ CR GR +A K+L+++
Sbjct: 252 KGCNPDIVHYNTVILGFCREGRXLDACKVLEDM 284
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 13/213 (6%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
+ NQM E+ Y ++ +++RAV + + M N + P SY L
Sbjct: 175 LFNQMFKRDVAPDVES-YRILMQGLCRKSQVNRAVDLLEDMLNKGYV---PDALSYTTLL 230
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
+ + K ++ L +M G PDI N++I G+ DA ++
Sbjct: 231 NSLCRKKK--------LKEAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRXLDACKVLE 282
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
M PN SY L+ GLC QG A+ +EM KGF P +++L++
Sbjct: 283 DMPS-NGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNV 341
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
G++EE + L EM+ T+ ++ IC
Sbjct: 342 GKLEEACEVLXEMLRHGEAXHTETWVAIIPRIC 374
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA-QGRTKN 308
I P +FS +I+ Y +N + AL+ FH M + ++ P + L+ L + + +
Sbjct: 80 INPSLFS--DIIEIYGEANLPDQALKTFHSM-LQFHSKPLPKHLNXLLQLLVSHRNYIRP 136
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L R G P +KSYN L+SA NG++ +M ++ D +YR ++
Sbjct: 137 AFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQ 196
Query: 369 EICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+CR+ + A+ LL+++ NK + D +YT LL+ L
Sbjct: 197 GLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSL 233
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 153/300 (51%), Gaps = 23/300 (7%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q DPL+ E+F++AS QP FRH+ STY I+ K G +K + +DD++ ++ + S T
Sbjct: 52 QSDPLLAKEIFDYASLQPNFRHNYSTYLILILKFGRSKHFSLLDDLLRRLKSESSQPITP 111
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
L++ +I + EA +A+ F M +P T L+R + ++H
Sbjct: 112 TLFSYLIKIYGEANLPDKALNTFYIM---LQFNIKP--------LTKHLNRILDILVSHR 160
Query: 234 -YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
Y+ LFK G+ PD S N +++ + L+ ++ A +F++M + +P+ S
Sbjct: 161 NYLRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKM-FKRDVVPDIQS 219
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y L+ LC + + A +L ++M KGFVP S +Y +L+++L ++ E K L M
Sbjct: 220 YRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMK 279
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN----------KNLIDGYTYTKLLD 402
K D + Y TV+ CR GRA +A K++ ++Q + L++G + +LD
Sbjct: 280 VKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLD 339
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +M G PDI N++I G+ +DA ++ M LPN SY L++GL
Sbjct: 274 LLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQA-NGCLPNLVSYRTLVNGL 332
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G A + +EM KGF P ++LV G +EE L + +E +
Sbjct: 333 CHLGMLDEATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHK 392
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDV---LEDDFGNSIR 413
T+ ++ +IC + +K+ L+ I+ T+++D LED IR
Sbjct: 393 DTWMIIVPQIC---EVDDGVKIDGVLEEVLKIEIKGDTRIVDAGIGLEDYLIRKIR 445
>gi|449445824|ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
gi|449487417|ref|XP_004157616.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Cucumis sativus]
Length = 486
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 147/297 (49%), Gaps = 22/297 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG--------T 172
+FNWAS FRHD ST+ M R L + E+ ++ + ++P C T
Sbjct: 88 FHVFNWASTIDSFRHDHSTFAWMARTLATTDRFFELTSLLRFLASSPCPCSDGIFSCPQT 147
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E+++ I + ARK AV+ F M+ + ++ RPS+ YNIL F+ G+
Sbjct: 148 ESIFQFSISAYCRARKFDEAVFAFDSMR--KLIDGRPSVVVYNILINGFVKSGR------ 199
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ + +M++D ++PD+++ N +I GY ++ AL +F +M PN S
Sbjct: 200 --FDKALGFYSRMLSDRVKPDVYTFNILISGYCRNSQFVQALELFKEMR-EKGCSPNVIS 256
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
++ LI G + + ++ L EM G SS + L+ L+ G++ E + L +
Sbjct: 257 FNTLIKGFFRERKFEDGIALAYEMIELGCKFSSVTCEILMDGLSREGKIFEACEILLDFS 316
Query: 353 EKQ-RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVLEDD 407
KQ P D+ Y V++ +C +G AG+AM+++ EL + + + T T L+D L +
Sbjct: 317 RKQVLPKDY-DYYGVVEMLCGKGNAGKAMEVVDELWMEGNVPSFITSTTLIDGLRKE 372
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+G P + ++I G VNDA+ + +M V +P+S +++ L+ LC +T
Sbjct: 353 EGNVPSFITSTTLIDGLRKEGRVNDAMNVTERMLEV-GMIPDSVTFNSLLQDLCNVRKTV 411
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A +L KGF P +K+Y +LVS + G E + + EM++K+ D TY ++
Sbjct: 412 EANKLRLLASSKGFEPDNKTYYTLVSGYTMEGNKVEGQRLVEEMLDKEFIPDIATYNRLM 471
Query: 368 DEI 370
D +
Sbjct: 472 DRL 474
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 158/310 (50%), Gaps = 17/310 (5%)
Query: 99 PPRFNNEELCNVMTLQEDPLVCLELFNWASKQ--PRFRHDASTYHIMTRKLGAAKMYQEM 156
P + N + ++ ++D L +F+ A+++ FRHD +T+ M +L + ++
Sbjct: 10 PKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPA 69
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
+ ++ +M TE ++ TI + + A+ VF M++ + +P+ +SY
Sbjct: 70 EGMLERMKQEDCEV-TEDVFLTICRGYGRVHRPLDAIRVFHKMED---FQVKPTQKSYLT 125
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH-VNDALR 275
+F + NHV +K+M GI P + SLN +IK + V A R
Sbjct: 126 VFDILVEE------NHVKRAI--GFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFR 177
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+F +M P+S++Y LI+GLC G+ A+EL DEM+ KG PS SY SL+ L
Sbjct: 178 LFREMPN-RGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGL 236
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DG 394
+ ++E ++ L EMI + TY +++D +C+ G + +AM+LL+ + + L+ +
Sbjct: 237 CQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNM 296
Query: 395 YTYTKLLDVL 404
TY+ L++ L
Sbjct: 297 VTYSTLINGL 306
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 126/266 (47%), Gaps = 20/266 (7%)
Query: 140 YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYM 199
Y + R L A +++ +M+D P T+ Y T+ E + RA+ +K M
Sbjct: 95 YGRVHRPLDAIRVFHKMED----FQVKP----TQKSYLTVFDILVEENHVKRAIGFYKEM 146
Query: 200 KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNS 259
R P++ S NIL A N +E+ LF++M N G +PD ++ +
Sbjct: 147 ---REKGIPPTVVSLNILIKALCK-------NEETVESAFRLFREMPNRGCQPDSYTYGT 196
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
+I G ++ A + +M P+ SY LIHGLC A EL +EM
Sbjct: 197 LINGLCKLGKISQAKELLDEMEE-KGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIIN 255
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G P+ +Y+SL+ L +G + ++ L M+ ++ + +TY T+++ +C+ G+ EA
Sbjct: 256 GIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREA 315
Query: 380 MKLLKELQNKNL-IDGYTYTKLLDVL 404
+++L ++ + L D Y +++ L
Sbjct: 316 VEILDRMRLQGLKPDAGMYGRIISGL 341
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 9/191 (4%)
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ + N C+P +Y L GK + + L +M G+ P +
Sbjct: 176 FRLFREMPNRGCQPDSYTYGTLINGLCKLGK--------ISQAKELLDEMEEKGLSPSVV 227
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S S+I G SN++++A+ + +M ++ PN F+Y L+ GLC G + A EL +
Sbjct: 228 SYTSLIHGLCQSNNLDEAIELLEEM-IINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEV 286
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M R+ +P+ +Y++L++ L G+ E V+ L M + D Y ++ +C
Sbjct: 287 MVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACN 346
Query: 376 AGEAMKLLKEL 386
EA + E+
Sbjct: 347 YQEAANFIDEM 357
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 30/269 (11%)
Query: 136 DASTYHIMTR---KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
D+ TY + KLG +E+ D + + +PS Y ++I+ ++ L A
Sbjct: 190 DSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVS----YTSLIHGLCQSNNLDEA 245
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + + M + P++ +Y+ L G ++ ME L + MV + P
Sbjct: 246 IELLEEMIING---IEPNVFTYSSLMDGLCKSGHSSQ----AME----LLEVMVRRRLLP 294
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + +++I G +A+ I +M + P++ Y +I GLCA + A
Sbjct: 295 NMVTYSTLINGLCKEGKHREAVEILDRMRL-QGLKPDAGMYGRIISGLCAACNYQEAANF 353
Query: 313 CDEMKRKGFVPSSKSY-------NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
DEM G P+ S+ N +V L N + + M + V+ T+
Sbjct: 354 IDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDC 413
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLIDG 394
++ C+RG +A ++L+E+ ++DG
Sbjct: 414 LVKCFCKRGDLNKAARILEEM----ILDG 438
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 137/316 (43%), Gaps = 40/316 (12%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
+ F WA +Q F+HD TY+ + L A K Y + + +ML T + +N +I
Sbjct: 103 ISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFS-FNILI 161
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI-- 238
FA R+ AV F+ MK R C+P + ++ IL G + V+ E +
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKR---CKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAM 218
Query: 239 --------------------------RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
R +F QM G PD + N+MI G + H +
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
AL++ M + +P +Y L++ LC G + A EL M GF P+S Y SL+
Sbjct: 279 ALKVLDNM-LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLI 337
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ----N 388
A +G ++E EM+E D IT+ ++D +C+ G +A K +E+
Sbjct: 338 HGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCK 397
Query: 389 KNLIDGYTYTKLLDVL 404
N++ TYT ++ L
Sbjct: 398 PNVV---TYTTIIQGL 410
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 131/301 (43%), Gaps = 34/301 (11%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F DA Y+ M L A QE V++ MLA TE Y ++ +A L RA
Sbjct: 256 FPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV-PTEVTYGILVNSLCKAGTLERA 314
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------NTYINHVYM 235
+F+ M S RP+ Y L F G+ I H M
Sbjct: 315 EELFRVMAASGF---RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVM 371
Query: 236 ETIRCL----------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
C F++M+ G +P++ + ++I+G V +A RI M + +
Sbjct: 372 IDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM-IAHG 430
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+S +Y L+ G C GR A +L DE+ + P+ + Y+SLV+ L G VE+T+
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490
Query: 346 KNLWEMIE-KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDV 403
+L+E + +D +++ +C+ GR EA ++ + + ++ D TY L++
Sbjct: 491 DDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550
Query: 404 L 404
L
Sbjct: 551 L 551
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILS--NHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+F++MV++G +PD + N +I G S N V A + H + V YLP++ +Y L
Sbjct: 528 IFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKV-GYLPDAVTYTPLCI 586
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC G A ++ +E +G+ +Y +L + L G+V+ V EM+ +
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
D Y +++ + + + +A K E+ K TYT L+ L
Sbjct: 647 DAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQAL 693
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 18/253 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRA 192
DA TY + +G K+ E+D V +ML S G A Y + ++ RA
Sbjct: 577 DAVTYTPLC--IGLCKI-GEVDRAV-KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V +F+ M P +Y + N I +E F +M+ G +P
Sbjct: 633 VSLFQEMVRQGG---APDAAAYCCII--------NGLIKVKKLEDACKFFDEMIGKGQKP 681
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + ++++ + +V++A F M + + YD LIHG C + A +L
Sbjct: 682 TVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKL 741
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++M +G VP++ + SL L +G+ E+ + L EM P T+ +LD + +
Sbjct: 742 FEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRK 801
Query: 373 RGRAGEAMKLLKE 385
+G+ +KL++E
Sbjct: 802 SDESGKLLKLVQE 814
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 21/236 (8%)
Query: 149 AAKMYQEMDDVVNQMLAT-----PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSR 203
+ + +DD+ Q A P C +II + +L A +F+ M +
Sbjct: 483 GGSVEKTLDDLFEQSKAAAETLDPGLC------CSIIVGLCKTGRLDEACRIFQRMVSE- 535
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
C+P +YNIL L R + + + L + G PD + + G
Sbjct: 536 --GCKPDATTYNILING-LCRSRENRVERAFA-----LLHDLEKVGYLPDAVTYTPLCIG 587
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
V+ A+++ + + + +Y L GLC QG+ A L EM R+G P
Sbjct: 588 LCKIGEVDRAVKMLEEASS-RGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
+ +Y +++ L ++E+ K EMI K + TY ++ +C G EA
Sbjct: 647 DAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEA 702
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 10/142 (7%)
Query: 261 IKGYILSNHVNDALR----------IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+ G +L +HV LR F G + + F+Y+ L++ L A+
Sbjct: 80 VHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCY 139
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ +EM + G P++ S+N L+ + A ++ V M K+ D T+ ++D +
Sbjct: 140 AIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199
Query: 371 CRRGRAGEAMKLLKELQNKNLI 392
C+ G +A ++ E+ +
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFV 221
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 137/316 (43%), Gaps = 40/316 (12%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
+ F WA +Q F+HD TY+ + L A K Y + + +ML T + +N +I
Sbjct: 103 ISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFS-FNILI 161
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI-- 238
FA R+ AV F+ MK R C+P + ++ IL G + V+ E +
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKR---CKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAM 218
Query: 239 --------------------------RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
R +F QM G PD + N+MI G + H +
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQE 278
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
AL++ M + +P +Y L++ LC G + A EL M GF P+S Y SL+
Sbjct: 279 ALKVLDNM-LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLI 337
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ----N 388
A +G ++E EM+E D IT+ ++D +C+ G +A K +E+
Sbjct: 338 HGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCK 397
Query: 389 KNLIDGYTYTKLLDVL 404
N++ TYT ++ L
Sbjct: 398 PNVV---TYTTIIQGL 410
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 129/301 (42%), Gaps = 34/301 (11%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F DA Y+ M L A QE V++ MLA TE Y ++ +A L RA
Sbjct: 256 FPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV-PTEVTYGILVNSLCKAGTLERA 314
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------NTYINHVYM 235
+F+ M S RP+ Y L F G+ I H M
Sbjct: 315 EELFRVMAASGF---RPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVM 371
Query: 236 ETIRCL----------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
C F++M+ G +P++ + ++I+G V +A RI M + +
Sbjct: 372 IDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGM-IAHG 430
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+S +Y L+ G C GR A +L DE+ + P+ + Y+SLV L G VE T+
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490
Query: 346 KNLWEMIEKQRP-VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDV 403
+L+E + +D +++ +C+ GR EA ++ + + ++ D TY L++
Sbjct: 491 DDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550
Query: 404 L 404
L
Sbjct: 551 L 551
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILS--NHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+F++MV++G +PD + N +I G S N V A + H + +V YLP++ +Y L
Sbjct: 528 IFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMV-GYLPDAVTYTPLCI 586
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC G A ++ +E +G+ +Y +L + L G+V+ V EM+ +
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
D Y +++ + + + +A K E+ K TYT L+ L
Sbjct: 647 DAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQAL 693
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 18/253 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRA 192
DA TY + +G K+ E+D V +ML S G A Y + ++ RA
Sbjct: 577 DAVTYTPLC--IGLCKI-GEVDRAV-KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRA 632
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V +F+ M P +Y + + +GK +E F +M+ G +P
Sbjct: 633 VSLFQEMVRQGG---APDAAAYCCIINGLI-KGKK-------LEDACKFFDEMIGKGQKP 681
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + ++++ + +V++A F M + + YD LIHG C + A +L
Sbjct: 682 TVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKL 741
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++M +G VP++ + SL L +G+ E+ + L EM P T+ +LD + +
Sbjct: 742 FEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRK 801
Query: 373 RGRAGEAMKLLKE 385
+G+ +KL++E
Sbjct: 802 SDESGKLLKLVQE 814
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 19/273 (6%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSR 191
+R D T+ +M L + +++ +M+ C + Y TII + K+ R
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR--GGCKPNVVTYTTIIQGLS---KIGR 415
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
F+ MK C P +Y L F G+ + E +C
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKC--------SSS 467
Query: 252 PDIFSLNSMIKGYILSNHVNDALR-IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P++ +S++KG V + L +F Q L ++ GLC GR A
Sbjct: 468 PNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIV-GLCKTGRLDEAC 526
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGE--VEETVKNLWEMIEKQRPVDFITYRTVLD 368
+ M +G P + +YN L++ L + E VE L ++ D +TY +
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCI 586
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKL 400
+C+ G A+K+L+E ++ D YT L
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL 619
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 10/142 (7%)
Query: 261 IKGYILSNHVNDALR----------IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+ G +L +HV LR F G + + F+Y+ L++ L A+
Sbjct: 80 VHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCY 139
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ +EM + G P++ S+N L+ + A ++ V M K+ D T+ ++D +
Sbjct: 140 AIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199
Query: 371 CRRGRAGEAMKLLKELQNKNLI 392
C+ G +A ++ E+ +
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFV 221
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 153/339 (45%), Gaps = 33/339 (9%)
Query: 99 PPRFNNEELCNVMTLQEDPLVCLELFNWASKQPR---FRHDASTYHIMTRKLGAAKMYQE 155
P R ++ L +++ LQEDP + L LF + P FR+ Y +M KLG AKM+ E
Sbjct: 6 PKRISSFRLASLLRLQEDPKLALHLFQHPNSNPNPKPFRYSLLCYDLMITKLGRAKMFHE 65
Query: 156 MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
M+ ++ Q E L+ II F+ A A+ +F M R C+ +I+SYN
Sbjct: 66 MEQILLQFKTQTRLVAKEPLFCNIITFYGRAGLPQNALKMFDEMPLYR---CQRTIKSYN 122
Query: 216 ILFTAFL-----SRGKNTYIN---HVYME--TIRCLFKQMVNDG---------------- 249
L + + ++N HV + T + + + +DG
Sbjct: 123 TLLNVLMICKEFDVMREHFVNIKRHVKPDGCTFNIMIRGLCSDGRVDDALKVLDEMKNRD 182
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ P+ + ++I G L+ + +A ++ M V+ PN + Y LI GLCA G A
Sbjct: 183 LVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYATLIKGLCAVGELSFA 242
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
L +EM+R G S Y++L+S L G +E L EM K D +TY +++
Sbjct: 243 LRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELKGCKADTVTYNVMING 302
Query: 370 ICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLDVLEDD 407
C+ A K+L E ++N+ D +Y +L L D
Sbjct: 303 FCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKD 341
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 111/287 (38%), Gaps = 31/287 (10%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ D T++IM R L + + V+++M + + T+IY KL A
Sbjct: 149 KPDGCTFNIMIRGLCSDGRVDDALKVLDEM-KNRDLVPNQVTFGTLIYGLCLNLKLKEAF 207
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI---------------NHVYMETI 238
+ YM N L C P+ Y L + G+ ++ + +Y I
Sbjct: 208 KLKDYMVNVHGL-C-PNEYVYATLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLI 265
Query: 239 RCLFK------------QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
LFK +M G + D + N MI G+ A +I +M +
Sbjct: 266 SGLFKVGRKDEVFGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAYKILDEM-MENRC 324
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
P+ SY+ ++ LC G+ A +L ++M R+G P SY + L+ E ++
Sbjct: 325 KPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDAAF 384
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
L EM+ K + ++ +C+ G +L L N ID
Sbjct: 385 ILDEMVFKGFAPRSSSICKFINRLCQNGDEDLVWSVLNCLGKINAID 431
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 142/296 (47%), Gaps = 19/296 (6%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ Q DPL L++FN + F+H TY M KLG ++ M+DV+ +M
Sbjct: 13 VIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDS 72
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
E +Y I+ + K+ AV VF+ M +C PS++SYN + + G +
Sbjct: 73 KMLEGVYIGIMRDYGRKGKVQEAVNVFERMDF---YDCEPSVQSYNAIMNILVEYGYFSQ 129
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNY 286
+ VYM +M + GI PD+++ +K + ++ ALR+ + M G +N
Sbjct: 130 AHKVYM--------RMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFN- 180
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ SY +I G + A L DEM ++G P ++N L+ L G V+E+ K
Sbjct: 181 ---AVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEK 237
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+++++ + T+ + +CR+G EA +LL+ + ++ L D +Y L+
Sbjct: 238 LFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLI 293
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + SYN L F K + C +MVN G+EP+ F+ N++I G+ +
Sbjct: 284 PDVISYNTLICGFCKHSK--------LVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAG 335
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ +A +I + ++P+ F+Y LI+GLC G A + E KGF S Y
Sbjct: 336 MMQNADKILRD-AMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILY 394
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+LV L+ G V + ++ + +M+E D TY V++ +C+ G +A +L +
Sbjct: 395 NTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIA 454
Query: 389 KNLI-DGYTYTKLLD 402
K I D +T+ L+D
Sbjct: 455 KGCIPDIFTFNTLID 469
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 13/253 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + A M Q D ++ + F E Y+++I ++RA+ VF Y
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFK-GFIPDEFTYSSLINGLCNDGDMNRAMAVF-Y 380
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+ + SI YN L +G + ++ ++ L K M+ G PDI++ N
Sbjct: 381 EAMEKGF--KHSIILYNTLVKGLSKQG-------LVLQALQ-LMKDMMEHGCSPDIWTYN 430
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++ G ++DA I + + +P+ F+++ LI G C Q A E+ D M
Sbjct: 431 LVVNGLCKMGCLSDANGILND-AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS 489
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G P +YN+L++ L +++ V M+EK + ITY +++ C+ + E
Sbjct: 490 HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE 549
Query: 379 AMKLLKELQNKNL 391
AM+L KE++ + L
Sbjct: 550 AMELFKEMKTRGL 562
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 117/235 (49%), Gaps = 19/235 (8%)
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF-KYMKNSRNLECRPSI 211
Y D+++ Q C +N +I+ + + + +F K MK C P++
Sbjct: 201 YHLFDEMLKQ-----GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGV---C-PNL 251
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
++NI +G ++ L + +V++G+ PD+ S N++I G+ + +
Sbjct: 252 FTFNIFIQGLCRKGA--------IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
+A H+M V PN F+Y+ +I+G C G +NA ++ + KGF+P +Y+SL
Sbjct: 304 EAECYLHKM-VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++ L +G++ + +E +EK I Y T++ + ++G +A++L+K++
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LYNT++ ++ + +A+ + MK+ C P I +YN++ G + N +
Sbjct: 393 LYNTLVKGLSKQGLVLQAL---QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGIL 449
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+ I G PDIF+ N++I GY +++ A+ I M + + P+ +Y+
Sbjct: 450 NDAIA--------KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM-LSHGITPDVITYN 500
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L++GLC + N + M KG P+ +YN L+ + + +V E ++ EM +
Sbjct: 501 TLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
D +T T++ +C G +A +L ++ +
Sbjct: 561 GLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 11/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ +ARKL V FK M C P+I +YNIL +F K + M
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKG---CTPNIITYNILIESFCKDRKVSEA----M 551
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LFK+M G+ PDI +L ++I G + ++ A +F + Y + ++ ++
Sbjct: 552 E----LFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNI 607
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+ C + A +L +M P + +Y ++ + G ++ L E I K
Sbjct: 608 MINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKG 667
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
F T VL+ +C R EA+ ++ + ++
Sbjct: 668 LVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIV 704
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 159/361 (44%), Gaps = 68/361 (18%)
Query: 107 LCNVMTLQEDPLVCLELF-NWASKQPR--FRHDASTYHIMTRKLGAAKMYQEMDDVVNQM 163
L +++ LQ+DP + L+LF N K P FR+ +Y ++ KLG AKM+ EM +++ Q+
Sbjct: 12 LASLLRLQKDPKLALQLFKNPNPKTPSKPFRYSLLSYDLIITKLGRAKMFNEMQEILAQL 71
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL- 222
F EAL+ II F+ AR A+ + + + R + +++SYN L + FL
Sbjct: 72 KEETLFTPKEALFCDIINFYGRARLPENALKLLVELPSFR---VQRTVKSYNSLLSVFLM 128
Query: 223 ---------------SRGKNTYINHVYMETIRC----------LFKQMVNDGIEPDIFSL 257
GK + + C +F +M N G+ P++ +
Sbjct: 129 CKDFDKMRELFVGIEKLGKADACTYNLLIRGFCASGRLDDASKVFDEMTNRGVSPNVITF 188
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ-------------- 303
++I G+ L + +A ++ M VY PN++ Y LI G+C
Sbjct: 189 GNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYASLIKGVCKNGELSLAFRLKKEMI 248
Query: 304 ---------------------GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
GR + A + ++MK +G+ P + +YN +++ + + E
Sbjct: 249 RNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFE 308
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ L EM+EK D I+Y +L E+ G+ GEA L +++ + D +Y L
Sbjct: 309 AAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILF 368
Query: 402 D 402
D
Sbjct: 369 D 369
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A+Y+T+I +A + A+ V++ MK +P +YN++ N +
Sbjct: 257 AIYSTLISGLFKAGRKEEALGVWEDMKERGY---KPDTVTYNVII--------NLFCKDK 305
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
E L +MV G +PD+ S N +++ +A +F M P+ SY
Sbjct: 306 DFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPR-RGCAPDVVSY 364
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
L G C + K A + DEM KGFVP S S V+ L G+ E+ +++ + +E
Sbjct: 365 RILFDGFCNGMQFKEAAFILDEMIFKGFVPCSASICKFVNRLC-EGKNEDLLRSAFNTLE 423
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
K + V+ +R + + + + + L+ L
Sbjct: 424 KGKLVNVDLWRMAVAMVFKDDKLSSSFNLVDSL 456
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 142/296 (47%), Gaps = 19/296 (6%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ Q DPL L++FN + F+H TY M KLG ++ M+DV+ +M
Sbjct: 13 VIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDS 72
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
E +Y I+ + K+ AV VF+ M +C PS++SYN + + G +
Sbjct: 73 KMLEGVYIGIMRDYGRKGKVQEAVNVFERMDF---YDCEPSVQSYNAIMNILVEYGYFSQ 129
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNY 286
+ VYM +M + GI PD+++ +K + ++ ALR+ + M G +N
Sbjct: 130 AHKVYM--------RMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFN- 180
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ SY +I G + A L DEM ++G P ++N L+ L G V+E+ K
Sbjct: 181 ---AVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEK 237
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+++++ + T+ + +CR+G EA +LL+ + ++ L D +Y L+
Sbjct: 238 LFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLI 293
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + SYN L F H + C +MVN G+EP+ F+ N++I G+ +
Sbjct: 284 PDVISYNTLICGFCK--------HSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAG 335
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ +A +I + ++P+ F+Y LI+GLC G A + E KGF S Y
Sbjct: 336 MMQNADKILRD-AMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILY 394
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+LV L+ G V + ++ + +M+E D TY V++ +C+ G +A +L +
Sbjct: 395 NTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIA 454
Query: 389 KNLI-DGYTYTKLLD 402
K I D +T+ L+D
Sbjct: 455 KGCIPDIFTFNTLID 469
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 13/253 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + A M Q D ++ + F E Y+++I ++RA+ VF Y
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMF-KGFIPDEFTYSSLINGLCNDGDMNRAMAVF-Y 380
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+ + SI YN L +G + ++ ++ L K M+ G PDI++ N
Sbjct: 381 EAMEKGF--KHSIILYNTLVKGLSKQG-------LVLQALQ-LMKDMMEHGCSPDIWTYN 430
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++ G ++DA I + + +P+ F+++ LI G C Q A E+ D M
Sbjct: 431 LVVNGLCKMGCLSDANGILND-AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS 489
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G P +YN+L++ L +++ V M+EK + ITY +++ C+ + E
Sbjct: 490 HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE 549
Query: 379 AMKLLKELQNKNL 391
AM+L KE++ + L
Sbjct: 550 AMELFKEMKTRGL 562
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 116/235 (49%), Gaps = 19/235 (8%)
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF-KYMKNSRNLECRPSI 211
Y D+++ Q C +N +I+ + + + +F K MK P++
Sbjct: 201 YHLFDEMLKQ-----GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG----VCPNL 251
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
++NI +G ++ L + +V++G+ PD+ S N++I G+ + +
Sbjct: 252 FTFNIFIQGLCRKGA--------IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
+A H+M V PN F+Y+ +I+G C G +NA ++ + KGF+P +Y+SL
Sbjct: 304 EAECYLHKM-VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++ L +G++ + +E +EK I Y T++ + ++G +A++L+K++
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDM 417
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LYNT++ ++ + +A+ + MK+ C P I +YN++ G + N +
Sbjct: 393 LYNTLVKGLSKQGLVLQAL---QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGIL 449
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+ I G PDIF+ N++I GY +++ A+ I M + + P+ +Y+
Sbjct: 450 NDAIA--------KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM-LSHGITPDVITYN 500
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L++GLC + N + M KG P+ +YN L+ + + +V E ++ EM +
Sbjct: 501 TLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
D +T T++ +C G +A +L ++ +
Sbjct: 561 GLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKE 595
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ +ARKL V FK M C P+I +YNIL +F K + M
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKG---CTPNIITYNILIESFCKDRKVSEA----M 551
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LFK+M G+ PDI +L ++I G + ++ A +F + Y + ++ ++
Sbjct: 552 E----LFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNI 607
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+ C + A +L +M P + +Y ++ + G ++ L E I K
Sbjct: 608 MINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKG 667
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL 383
F T VL+ +C R EA+ ++
Sbjct: 668 LVPSFTTCGKVLNCLCVTHRLSEAVVII 695
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 164/348 (47%), Gaps = 44/348 (12%)
Query: 78 SKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDA 137
S PA + T + P ++E N++ + DP LE+FN ++Q F H+
Sbjct: 104 SPKPDPPATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNN 163
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-TEALYNTIIYFFAEARKLSRAVYVF 196
+TY + KL +K +Q +D V++QM T C E ++ ++ F++ R V +F
Sbjct: 164 ATYATILHKLAKSKKFQAIDAVLHQM--TYETCKFHEGIFLNLMKHFSKLSLHERVVEMF 221
Query: 197 KYMKNSRNLECRPSIRS----YNILF---------------TAF-----LSRGKNTYINH 232
+ + +PS+++ N+L +AF + + +Y N
Sbjct: 222 DAIXPI--VREKPSLKAISTCLNLLVESNQSSITAKNGDIDSAFEVVEEMKKSHVSYPNL 279
Query: 233 VYMETI---RC----------LFKQMVN-DGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
+ T+ C LF++MV+ D I PD + N++I G+ V+ AL+I
Sbjct: 280 ITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIME 339
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
M PN F+Y L++G C +GR + A+E+ DEMK G P + Y +L++
Sbjct: 340 FMKK-NGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRA 398
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
G V+E ++ L +M E + D +T+ +L +CR GR EA +L+ L
Sbjct: 399 GRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERL 446
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 119/250 (47%), Gaps = 13/250 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + L + +E ++ +M++ YN +I F K+ RA+ + ++
Sbjct: 281 TYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEF 340
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
MK + C P++ +Y+ L F G+ +E + +F +M + G++PD
Sbjct: 341 MKKNG---CNPNVFNYSALMNGFCKEGR--------LEEAKEVFDEMKSLGLKPDTVGYT 389
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I + + V++A+ + M ++ +++ ++ GLC +GR + A + + +
Sbjct: 390 TLINFFCRAGRVDEAMELLKDM-XENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPY 448
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G + SY ++++L GE+++ + + M+ + F T +L +C G+ G+
Sbjct: 449 EGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGD 508
Query: 379 A-MKLLKELQ 387
A M LL L+
Sbjct: 509 AVMALLGLLE 518
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 166/380 (43%), Gaps = 83/380 (21%)
Query: 96 SELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE 155
++LP F ++L + + Q D L+L +WASKQP F + Y + RKLG +
Sbjct: 64 TQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGS 123
Query: 156 MDDVVNQMLATPSFCGTEALYNT---IIYFFAEARKLSRAVYVFKYMK------------ 200
M V+ +M T G E T +I +A+ AV V M+
Sbjct: 124 MRRVLQEMKHT----GCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTY 179
Query: 201 -------------------NSRNLE--CRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
NSR + +P + ++NIL A L R + ME
Sbjct: 180 NFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKA-LCRAHQIRPAILMME--- 235
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNYL---- 287
+M + G+ PD + ++++G+I ++N ALRI QM V N L
Sbjct: 236 ----EMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGY 291
Query: 288 ----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
P+ F+++ L++GLC G K+A E+ D M ++GF P
Sbjct: 292 CKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDI 351
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+YNSL+ L GEVEE V+ L +MI + + +TY T++ +C+ + EA +L +
Sbjct: 352 FTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARV 411
Query: 386 LQNKNLI-DGYTYTKLLDVL 404
L +K ++ D T+ L+ L
Sbjct: 412 LTSKGILPDVCTFNSLIQGL 431
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 19/231 (8%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K R V ++ N RP ++N L G ++ H + M+
Sbjct: 293 KEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIG---HVKHALE-----ILDVMLQ 344
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+G +PDIF+ NS+I G V +A+ I +QM ++ ++ PN+ +Y+ LI LC + + +
Sbjct: 345 EGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQM-ILRDFSPNTVTYNTLISTLCKENQVE 403
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A EL + KG +P ++NSL+ L L ++ EM K D TY ++
Sbjct: 404 EATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLI 463
Query: 368 DEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVLEDDF 408
D +C RGR EA+ LLKE+++ LIDG+ K ++ E+ F
Sbjct: 464 DSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIF 514
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 20/273 (7%)
Query: 133 FRHDASTYHIMTR---KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL 189
FR D T++ + ++G K E+ DV+ Q P YN++I+ + ++
Sbjct: 312 FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDI----FTYNSLIFGLCKLGEV 367
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
AV + M + P+ +YN L + + +E L + + + G
Sbjct: 368 EEAVEILNQMILR---DFSPNTVTYNTLISTLCKENQ--------VEEATELARVLTSKG 416
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
I PD+ + NS+I+G L+N+ A+ +F +M + P+ F+Y+ LI LC++GR + A
Sbjct: 417 ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCH-PDEFTYNMLIDSLCSRGRLEEA 475
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
L EM+ G + +YN+L+ N +EE + EM + + +TY T++D
Sbjct: 476 LSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDG 535
Query: 370 ICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+C+ R EA +L+ ++ + L D +TY LL
Sbjct: 536 LCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLL 568
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 124/266 (46%), Gaps = 22/266 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D TY+++ L + +E ++ +M + S C + YNT+I F + +++ A
Sbjct: 455 DEFTYNMLIDSLCSRGRLEEALSLLKEMES--SGCSRNVVTYNTLIDGFCKNKRIEEAEE 512
Query: 195 VFKYMK---NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
+F M+ SRN + +YN L KN + L QM+ +G++
Sbjct: 513 IFDEMELQGISRN------VVTYNTLIDGLC---KNRRVEEAAQ-----LMDQMLMEGLK 558
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD F+ NS++ + + + A I M P+S +Y LI GL GR + A
Sbjct: 559 PDKFTYNSLLTYFCRAGDIKKAADIVQTM-TSNGCEPDSVTYGTLILGLSKAGRVELASR 617
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L ++ KG V + ++YN ++ AL E V+ EM+EK P D +TY+ V +C
Sbjct: 618 LLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLC 677
Query: 372 RRGRA-GEAMKLLKELQNKNLIDGYT 396
G GEA+ L E+ +K + ++
Sbjct: 678 SGGGPIGEAVDFLVEMTDKGFLPDFS 703
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 163/401 (40%), Gaps = 65/401 (16%)
Query: 34 TLSNYYLSQTQINPHLKLSSNAILCSCYSAIALSRSSSRGVGKRSKADSKPALDDTQ--- 90
TL ++ + +N L++ + C S+ G K + + + D
Sbjct: 251 TLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNE 310
Query: 91 -FRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGA 149
FR P RF L N + LE+ + Q F D TY+ + L
Sbjct: 311 GFR------PDRFTFNSLVNGLCRIGHVKHALEILD-VMLQEGFDPDIFTYNSLIFGLCK 363
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFA------EARKLSR------------ 191
+E +++NQM+ F YNT+I EA +L+R
Sbjct: 364 LGEVEEAVEILNQMILR-DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 422
Query: 192 -----------------AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
A+ +F+ MK C P +YN+L + SRG+
Sbjct: 423 TFNSLIQGLCLTNNHRLAMELFEEMKTKG---CHPDEFTYNMLIDSLCSRGR-------- 471
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
+E L K+M + G ++ + N++I G+ + + +A IF +M G+ N +
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVV---- 527
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LI GLC R + A +L D+M +G P +YNSL++ G++++ + M
Sbjct: 528 TYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTM 587
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D +TY T++ + + GR A +LL+ +Q K ++
Sbjct: 588 TSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMV 628
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 164/362 (45%), Gaps = 33/362 (9%)
Query: 50 KLSSNAILCSCYSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCN 109
+L+ + +LC C S+ ++R + + K K KP D F A++ L F+ E+CN
Sbjct: 357 RLACDTLLC-CLSSKNMAREAGALLKKFGKIGHKP--DSATFNIAMNCLIKGFDLNEVCN 413
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
++ D V + + STY + + L A E + NQM+
Sbjct: 414 IL----DRFV----------EQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLL 459
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
C + YN +I F + + +A FK M+ P++ ++N L + G+
Sbjct: 460 CNVCS-YNMVIDCFCKTSMMDKATNTFKEMQYKG---IPPNLVTFNTLIDGYCKGGE--- 512
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+ R L ++ G +PDIF+ +S+I G + + DAL F +M V++ PN
Sbjct: 513 -----ICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEM-VMWGLSPN 566
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ +Y+ LIH LC G + +L +M+ G P S+N+L+ + G+VE+ K
Sbjct: 567 AVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFS 626
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGYTYTKLLDVL--ED 406
M+ D TY + C+ GR EA +L ++ N + D +T +LD L +D
Sbjct: 627 SMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQD 686
Query: 407 DF 408
F
Sbjct: 687 QF 688
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 162/377 (42%), Gaps = 33/377 (8%)
Query: 17 RTFNKHLCCTNSSHNSKTLSNYYLSQTQINPH-LKLSSNAILCSCYSAIALSRSSSRGVG 75
++ H+ T +S + ++Y L+ NP+ LK+S+N I + YS SR +
Sbjct: 33 KSAQNHISKTEASLGGNSDTHYLLNPQFTNPNSLKISNNPISANKYSKPIDHHYFSRILS 92
Query: 76 KRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASK-QPRFR 134
+ L + +F+ L N+ + +V+ QE+PL L+ + W S P F
Sbjct: 93 RHDWF----LLLNHEFKAKRITL----NSHSVASVLQNQENPLYPLKFYIWVSNMDPLFA 144
Query: 135 HDASTYHIMTRKLGAAKMYQEMDDVVN-QMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
D S ++ A +Y++ V++ ++L G + +L A
Sbjct: 145 KDQSVKGVL-----ANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAK 199
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
Y + L PS R YN + A + K+ ++ Y++ F+QM D +PD
Sbjct: 200 YCDEIFGQISFLGISPSTRLYNAVIDALV---KSNSLDLAYLK-----FQQMSADNCKPD 251
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
F+ N +I G S V++ALR+ QM + Y PN F+Y LI G + A +
Sbjct: 252 RFTYNILIHGVCRSGVVDEALRLVKQMEGL-GYSPNVFTYTILIDGFFNAKKVDEAFRVL 310
Query: 314 DEMKRKGFVPSSKSYNSLVSA----LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+ MK + PS + S + +A N E + E IE++ + + T+L
Sbjct: 311 ETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAI----EFIEREPVLQRLACDTLLCC 366
Query: 370 ICRRGRAGEAMKLLKEL 386
+ + A EA LLK+
Sbjct: 367 LSSKNMAREAGALLKKF 383
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+++II A+++ A+ F M P+ +YNIL + G +
Sbjct: 535 FSSIIDGLCRAKQIEDALGCFSEM---VMWGLSPNAVTYNILIHSLCIIGD--------V 583
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L ++M DGI PD+FS N++I+ + V DA ++F M + +P++++Y
Sbjct: 584 PRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSM-LSLGLIPDNYTYVA 642
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
I C GR A+EL M+ G +P S + N ++ AL + E K
Sbjct: 643 FIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQK 693
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G K E+ ++ G PS++ YN+++ AL + ++ +M D TY
Sbjct: 196 GLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTY 255
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
++ +CR G EA++L+K+++ + +TYT L+D
Sbjct: 256 NILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILID 295
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 153/353 (43%), Gaps = 73/353 (20%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEM-------------DDVVNQ 162
DP L F+WASKQ F H+ TY+ + L A+ E +V
Sbjct: 3 DPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTY 62
Query: 163 MLATPSFCGT---------------------EALYNTIIYFFAEARKLSRAVYVFKYMKN 201
+ C + A+YN +I+ +AR ++A+ F+ M+
Sbjct: 63 AVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMEC 122
Query: 202 SRNL---------ECR--------------------PSIRSYNILFTAFLSRGKNTYINH 232
+N+ C+ P+ +YN+L F K ++
Sbjct: 123 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK---VHR 179
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
Y+ L K+M G+ P++ + +++I G+ V+ A ++F QM V +PN +
Sbjct: 180 AYL-----LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM-VENGCMPNLVT 233
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ L+ GLC G A EL DEM+ +G P SY++L++ L G+++ +K +
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 293
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
P D + Y T++ +C+ GR EA KL +++ +N D T+T L+D L
Sbjct: 294 NGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 346
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 117/237 (49%), Gaps = 17/237 (7%)
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
Y+ +D++ + L F Y+T++ + K+ A+ VF+ ++ N +C P +
Sbjct: 251 YELLDEMRERGLQPDKFS-----YDTLMAGLCKTGKIDMALKVFE---DNSNGDCPPDVV 302
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+Y+ L G+ ++ LF++M + EPD+ + +++ G + + +
Sbjct: 303 AYSTLIAGLCKAGR--------LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A ++ M N PN +Y LI GLC G+ ++A+E+ M +G P+ +YNSL+
Sbjct: 355 AQQVLETMED-RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 413
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+ V+ + + EM D ITY T++D +C+ GRA EA +L +++ K
Sbjct: 414 HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 470
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 118/233 (50%), Gaps = 13/233 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E YN +I F + K+ RA + K MK S P++ +Y+ + F + T ++
Sbjct: 161 EWTYNVLINGFCKVHKVHRAYLLLKEMKESG---LAPNVVTYSTVIHGFC---RQTKVDT 214
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
Y LF+QMV +G P++ + N+++ G + +++A + +M P+ FS
Sbjct: 215 AYK-----LFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM-RERGLQPDKFS 268
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
YD L+ GLC G+ A ++ ++ P +Y++L++ L G ++E K +M
Sbjct: 269 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMR 328
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
E D +T+ ++D +C+ R EA ++L+ ++++N TY+ L+D L
Sbjct: 329 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 381
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 14/231 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + + A +F MK C P + +Y+ L F + +
Sbjct: 444 YNTLIDGLCKTGRAPEANRLFGDMKAKF---CNPDVITYSCLIGGFCKLER--------I 492
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R LF M+ + PD+ + +++++GY + V+DA R+ +M V + P+ ++Y
Sbjct: 493 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM-VASDCSPDVYTYTS 551
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C GR AR + M ++G P+ +Y +L+ A G+ + L EM+
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NKNL-IDGYTYTKLLDVL 404
+ ITYR+++ C G EA K+L+ L+ ++N D + Y ++D L
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGL 662
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 18/267 (6%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIY 181
LF+ KQ D T+ + A + + + ++ +M+A S C + Y +++
Sbjct: 498 LFDDMLKQAVL-PDVVTFSTLVEGYCNAGLVDDAERLLEEMVA--SDCSPDVYTYTSLVD 554
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
F + ++ A V K M C+P++ +Y L AF GK T L
Sbjct: 555 GFCKVGRMVEARRVLKRMAKRG---CQPNVVTYTALIDAFCRAGKPTVAYR--------L 603
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
++MV +G++P++ + S+I G+ + + +A +I ++ N + F+Y ++ GLC
Sbjct: 604 LEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLC 663
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI--EKQRPVD 359
GR A EL + +K+ G P Y +L+ L E+ + ++ L EM K RP +
Sbjct: 664 RTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRP-N 722
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKEL 386
Y V+ E+ R GR EA L EL
Sbjct: 723 AEAYEAVIQELAREGRHEEANALADEL 749
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 61/290 (21%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ ++ + +L A V + M++ RN C P++ +Y+ L G+ V
Sbjct: 339 FTALMDGLCKGDRLQEAQQVLETMED-RN--CTPNVITYSSLIDGLCKTGQVRDAQEV-- 393
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
FK+M+ GIEP++ + NS+I G+ ++N V+ AL + +M LP+ +Y+
Sbjct: 394 ------FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM-TATGCLPDIITYNT 446
Query: 296 LIHGLCAQGRTKNA-----------------------------------RELCDEMKRKG 320
LI GLC GR A R L D+M ++
Sbjct: 447 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 506
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
+P ++++LV G V++ + L EM+ D TY +++D C+ GR EA
Sbjct: 507 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 566
Query: 381 KLLKELQNKNL-IDGYTYTKLLD-------------VLEDDFGNSIRHHL 416
++LK + + + TYT L+D +LE+ GN ++ ++
Sbjct: 567 RVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNV 616
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 143/273 (52%), Gaps = 20/273 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRA 192
DA T++ + L +E + N+M+ + G E YNT+I + A
Sbjct: 165 DAITFNTLINGLCNEGKIKEAVGLFNEMV----WSGHEPNVISYNTVINGLCKNGNTIMA 220
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V VF+ M+ +R +P++ +YN + + K+ +N E + L +MV+ GI P
Sbjct: 221 VRVFRKMEQNRG---KPNVVTYNTIIDSLC---KDRLVN----EAVEFL-SEMVDRGIPP 269
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + N+++ G+ +N+A R+F +M V N +P++ +++ L+ GLC +G AR +
Sbjct: 270 DVVTYNTILHGFCSLGQLNEATRLFKEM-VGRNVMPDTVTFNILVDGLCKEGMVSEARCV 328
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+ M KG P++ +YN+L+ L+ +++E +K L MI K + +Y +++ C+
Sbjct: 329 SETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCK 388
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
R EA +LL E+ KNL D TY+ L+ L
Sbjct: 389 SKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGL 421
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 17/265 (6%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTEALYNTIIYFFAEA 186
+Q R + + TY+ + L ++ E + +++M+ P T YNTI++ F
Sbjct: 228 EQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVT---YNTILHGFCSL 284
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
+L+ A +FK M RN+ P ++NIL G + RC+ + M
Sbjct: 285 GQLNEATRLFKEMV-GRNV--MPDTVTFNILVDGLCKEG--------MVSEARCVSETMT 333
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
G EP+ ++ N+++ GY L N +++A+++ M + PN SY+ LI+G C R
Sbjct: 334 EKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIM-IGKGCAPNLSSYNILINGYCKSKRM 392
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
A+ L EM K P + +Y++L+ L G E + EM D + Y +
Sbjct: 393 NEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSIL 452
Query: 367 LDEICRRGRAGEAMKLLKELQNKNL 391
LD C+ G EA+KLLKE+ + +
Sbjct: 453 LDGFCKHGHLDEALKLLKEMHERRI 477
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 94/165 (56%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ +M GI+PD + N++I G + +A+ +F++M V + PN SY+ +I+GL
Sbjct: 153 VMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM-VWSGHEPNVISYNTVINGL 211
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G T A + +M++ P+ +YN+++ +L + V E V+ L EM+++ P D
Sbjct: 212 CKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDV 271
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+TY T+L C G+ EA +L KE+ +N++ D T+ L+D L
Sbjct: 272 VTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 110/231 (47%), Gaps = 13/231 (5%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
S+Y+I+ +K E ++++M + + Y+T++ + + A+ +FK
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEM-SEKNLTPDTVTYSTLMQGLCQVGRPREALNLFK 435
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
M +S L P + +Y+IL F G +++ L K+M I+P+I
Sbjct: 436 EMCSSGLL---PDLMAYSILLDGFCKHG--------HLDEALKLLKEMHERRIKPNIILY 484
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
+I+G ++ + A +F ++ P+ ++Y+ +I GL +G + A E +M+
Sbjct: 485 TILIRGMFIAGKLEVAKELFSKLSA-DGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKME 543
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
GF+P S SYN ++ N + ++ + EM+ K+ D T++ +LD
Sbjct: 544 DDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + ++++++ A + M + +NL P +Y+ L G+
Sbjct: 379 YNILINGYCKSKRMNEAKRLLSEM-SEKNL--TPDTVTYSTLMQGLCQVGRPR------- 428
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + LFK+M + G+ PD+ + + ++ G+ H+++AL++ +M PN Y
Sbjct: 429 EALN-LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHE-RRIKPNIILYTI 486
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G+ G+ + A+EL ++ G P +YN ++ L G +E + +M +
Sbjct: 487 LIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDG 546
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
D +Y ++ + + A++L+ E+ K D T+ LLD+ D
Sbjct: 547 FLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESHD 599
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
G NT N + ++ F +MV P + + + A+ + +QM + +
Sbjct: 68 GSNTS-NDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDL-F 125
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
N +S + LI+ LC A + +M + G P + ++N+L++ L G+++E
Sbjct: 126 GVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEA 185
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDV 403
V EM+ + I+Y TV++ +C+ G A+++ +++ QN+ + TY ++D
Sbjct: 186 VGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDS 245
Query: 404 LEDD 407
L D
Sbjct: 246 LCKD 249
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 17/197 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+I YN L G ++ R LF M G+EPD + ++MI GY S
Sbjct: 592 PNIFIYNALVDGLCKSGD--------IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 643
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+V +A +FH+M GV P+SF Y+ L+HG C +G + A L EM +KGF ++
Sbjct: 644 NVAEAFSLFHEMPSKGVQ----PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TT 698
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
S+N+L+ + +++E + EMI KQ D +TY TV+D C+ G+ EA L KE
Sbjct: 699 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 758
Query: 386 LQNKNLI-DGYTYTKLL 401
+Q +NLI D TYT L+
Sbjct: 759 MQERNLIVDTVTYTSLM 775
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 18/219 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ I +++ K++ A F M + + P Y +L G M
Sbjct: 457 FGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL---YTVLINGHFKAGN-------LM 506
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
E + +F+ + G+ PD+ + ++ I G + + V +AL++F ++ G+V P+ F+
Sbjct: 507 EALS-IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV----PDVFT 561
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI G C QG + A EL DEM KG P+ YN+LV L +G+++ K M
Sbjct: 562 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 621
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
EK D +TY T++D C+ EA L E+ +K +
Sbjct: 622 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 660
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 22/255 (8%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
AAK + EM D LY +I +A L A+ +F+++ L
Sbjct: 473 AAKYFDEMLD--------HGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL---HALGVL 521
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P +++ + L G+ E ++ +F ++ G+ PD+F+ +S+I G+
Sbjct: 522 PDVQTCSAFIHGLLKNGR-------VQEALK-VFSELKEKGLVPDVFTYSSLISGFCKQG 573
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V A + +M + PN F Y+ L+ GLC G + AR+L D M KG P S +Y
Sbjct: 574 EVEKAFELHDEM-CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 632
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQ-RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
++++ + V E EM K +P F+ Y ++ C+ G +AM L +E+
Sbjct: 633 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV-YNALVHGCCKEGDMEKAMNLFREML 691
Query: 388 NKNLIDGYTYTKLLD 402
K ++ L+D
Sbjct: 692 QKGFATTLSFNTLID 706
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 146/357 (40%), Gaps = 79/357 (22%)
Query: 96 SELPPRFNNEELCNVMTLQE--DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
S +P + N + + V+ + DP L+ F W+ Q ++ I+ +L ++++
Sbjct: 61 SHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELF 120
Query: 154 QEMDDVVNQMLATP---------------SFCGTE-ALYNTIIYFFAEARKLSRAVYVFK 197
+ V+ QM+ TP ++ G+ +++ +I + L A VF
Sbjct: 121 GLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFF 180
Query: 198 YMKNSRNL----ECR-----------PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
KN L C P+ +Y I+ TA L R K M + F
Sbjct: 181 VAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTII-TAGLCRAKR-------MNEAKLTF 232
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLC 301
++M G++PD + +++I G++ +++ LRI M V +P N +Y+ LIHGLC
Sbjct: 233 EEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM--VSCGIPINLITYNVLIHGLC 290
Query: 302 AQGRTKNAR-----------------------------------ELCDEMKRKGFVPSSK 326
G+ + A EL DEM+++ VPS+
Sbjct: 291 KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAV 350
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
SY ++++ L ++ K L +M + + Y T++ GR EA +LL
Sbjct: 351 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 407
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I+ + K+ +A + K M L C+P+ R++ +L Y M
Sbjct: 282 YNVLIHGLCKFGKMEKAAEILKGM---ITLGCKPNSRTFCLLIEG--------YCREHNM 330
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M + P S +MI G ++ A ++ +M PN Y
Sbjct: 331 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM-TFSGLKPNVVVYST 389
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G ++GR + AR L D M G P YN+++S L+ G++EE L E+ +
Sbjct: 390 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 449
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D +T+ + + G+ EA K E+ + L+
Sbjct: 450 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 486
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 13/226 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I + ++ ++ A +F M + +P YN L G M
Sbjct: 632 YSTMIDGYCKSENVAEAFSLFHEMPSKG---VQPHSFVYNALVHGCCKEGD--------M 680
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF++M+ G + S N++I GY S + +A ++F +M + +P+ +Y
Sbjct: 681 EKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEM-IAKQIMPDHVTYTT 738
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I C G+ + A L EM+ + + + +Y SL+ G+ E +M+ K
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
D +TY V+ C+ EA KL E+ K ++ T LL
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLL 844
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 102/236 (43%), Gaps = 14/236 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I + ++ K+ A +F+ M + + P +Y + GK M
Sbjct: 701 FNTLIDGYCKSCKIQEASQLFQEMIAKQIM---PDHVTYTTVIDWHCKAGK--------M 749
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LFK+M + D + S++ GY ++ +F +M V P+ +Y
Sbjct: 750 EEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM-VAKGVKPDEVTYGL 808
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+ C + A +L DE+ KG + ++ L++AL ++ E K L EM E
Sbjct: 809 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 868
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNS 411
T++ G+ EA ++ + +++ L+ T L+D++ + ++
Sbjct: 869 LKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVP--DTTTLIDLVNGNLNDT 922
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 149/326 (45%), Gaps = 23/326 (7%)
Query: 83 KPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHI 142
KP D + R +++ + P +LC ++ L D +ELF WA Q + H Y++
Sbjct: 62 KP-FDLPELRTSLTRITPY----QLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYM 116
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS 202
+ KLGAA ++ +D ++ QM E+L+ I+ + A +A + M+
Sbjct: 117 LIDKLGAAGEFKTIDALLMQM-KQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGV 175
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
+ C P+ RSYN++ L+ + +V+ E M++ GI P +++ ++K
Sbjct: 176 YS--CEPTFRSYNVVLDVLLAGNCPKVVPNVFYE--------MLSKGISPTVYTFGVVMK 225
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
L N V+ A + M + +PN+ Y LIH L GR +L +EM G +
Sbjct: 226 ALCLVNEVDSACALLKDM-TRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCI 284
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P ++N + L + E K + M+ + + TY ++ +CR G+ EA L
Sbjct: 285 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344
Query: 383 LKELQNKN------LIDGYTYTKLLD 402
L ++ N N LI+GY LD
Sbjct: 345 LNKVPNPNVVLFNTLINGYVSRGRLD 370
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 127/265 (47%), Gaps = 16/265 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY I+ + +E +V+++M + YN +I + K+ A+ +F
Sbjct: 426 TYTILIDRFCKEGRLEEARNVLDEM-SGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 484
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + C+P I ++N L K E L++ M+ +G+ + + N
Sbjct: 485 MSSK---GCKPDIFTFNSLIFGLCKVNK--------FEEALGLYQDMLLEGVIANTITYN 533
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMK 317
++I ++ + +AL++ + M ++ P + +Y+ LI LC G + L ++M
Sbjct: 534 TLIHAFLRRGAMQEALKLVNDM--LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 591
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG P++ S N L++ L G ++ ++ L +MI + D +TY ++++ +C+ GRA
Sbjct: 592 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 651
Query: 378 EAMKLLKELQNKNLI-DGYTYTKLL 401
EA+ L +LQ + + D TY L+
Sbjct: 652 EALNLFDKLQVEGICPDAITYNTLI 676
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 17/267 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +T++ L E +V++ML F Y +++ K+ A +
Sbjct: 286 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLR-GFTPNSFTYGVLMHGLCRMGKVDEARML 344
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ N P++ +N L ++SRG+ V E+ M++ G PDIF
Sbjct: 345 LNKVPN-------PNVVLFNTLINGYVSRGRLDEAKAVMHES-------MLSVGCGPDIF 390
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N++I G ++ A + ++M + PN +Y LI C +GR + AR + DE
Sbjct: 391 TYNTLILGLCKKGYLVSARELMNEMQI-KGCEPNVITYTILIDRFCKEGRLEEARNVLDE 449
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M KG ++ YN L+SAL + +V++ + +M K D T+ +++ +C+ +
Sbjct: 450 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 509
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
EA+ L +++ + +I + TY L+
Sbjct: 510 FEEALGLYQDMLLEGVIANTITYNTLI 536
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N++I+ + K A+ +++ M + + +YN L AFL RG M
Sbjct: 497 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIA---NTITYNTLIHAFLRRGA--------M 545
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L M+ G D + N +IK + ++ L +F M + PN+ S +
Sbjct: 546 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM-MSKGLNPNNISCNI 604
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC G ++A E +M +G P +YNSL++ L G +E + NL++ ++ +
Sbjct: 605 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL-NLFDKLQVE 663
Query: 356 RPV-DFITYRTVLDEICRRGRAGEAMKLL 383
D ITY T++ C+ G +A LL
Sbjct: 664 GICPDAITYNTLISWHCKEGMFDDAHLLL 692
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ D T++ + L ++E + ML T YNT+I+ F + A+
Sbjct: 491 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT-ITYNTLIHAFLRRGAMQEAL 549
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
K + + C +YN L A L R N +E LF+ M++ G+ P+
Sbjct: 550 ---KLVNDMLFRGCPLDDITYNGLIKA-LCRAGN-------IEKGLALFEDMMSKGLNPN 598
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
S N +I G + ++ AL M + P+ +Y+ LI+GLC GR + A L
Sbjct: 599 NISCNILINGLCRTGNIQHALEFLRDM-IHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 657
Query: 314 DEMKRKGFVPSSKSYNSLVS 333
D+++ +G P + +YN+L+S
Sbjct: 658 DKLQVEGICPDAITYNTLIS 677
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
TY+ + QE +VN ML P + YN +I A + + + +F
Sbjct: 531 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL---DDITYNGLIKALCRAGNIEKGLALF 587
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
+ M S+ L P+ S NIL G I H +E +R M++ G+ PDI +
Sbjct: 588 EDMM-SKGLN--PNNISCNILINGLCRTGN---IQHA-LEFLR----DMIHRGLTPDIVT 636
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
NS+I G + +AL +F ++ V P++ +Y+ LI C +G +A L
Sbjct: 637 YNSLINGLCKTGRAQEALNLFDKLQV-EGICPDAITYNTLISWHCKEGMFDDAHLLLSRG 695
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVE 342
GF+P+ ++ LVS G+ E
Sbjct: 696 VDSGFIPNEVTWYILVSNFIKEGDQE 721
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 141/314 (44%), Gaps = 33/314 (10%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML----- 164
++ L+EDP + L+ F WA Q FRH +Y I+ + A+MY + D V +++
Sbjct: 77 LLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRM 136
Query: 165 --------------ATPSFC-GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
+T + C +++ + F E L A F M+N R L P
Sbjct: 137 DMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTL---P 193
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
RS N L LS+ N + +R F M+ GI P +F+ N MI
Sbjct: 194 KARSCNFLLHR-LSKSGNG-------QLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 245
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ ++ R+F QM + P+ +Y+ LI G G + L +EMK G VP +YN
Sbjct: 246 LENSRRLFVQMREM-GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYN 304
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
L++ ++ + EM + +TY T++D C+ G A+KLL +++
Sbjct: 305 GLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRT 364
Query: 390 NLI-DGYTYTKLLD 402
L+ + +TYT L+D
Sbjct: 365 GLLPNEFTYTSLID 378
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LY +II+ RKL + + MK SR + P I + + A+ GK++ +
Sbjct: 477 LYGSIIWGHCSQRKLEETKLILEEMK-SRGISANPVIST--TIIDAYFKAGKSSDALN-- 531
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
F++M + G+E I + +I G + V A+ F +M + PN Y
Sbjct: 532 ------FFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRM-LSLGLQPNVAVYT 584
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GLC ++A++L DEM+ +G P ++ +L+ +G ++E + + M E
Sbjct: 585 SLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTEL 644
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D Y +++ + G +A K E+ K ++
Sbjct: 645 AIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGIL 682
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I + + L +F MK+ + C P I +YN L N Y M
Sbjct: 268 YNSLIDGYGKVGSLEEVASLFNEMKD---VGCVPDIITYNGLI--------NCYCKFEKM 316
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F +M N+G++P++ + +++I + + A+++ M LPN F+Y
Sbjct: 317 PRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRT-GLLPNEFTYTS 375
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI C G A +L ++M + G + +Y +L+ L G + E + M++
Sbjct: 376 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 435
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ Y ++ + R +AMK+LK++ N+
Sbjct: 436 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 471
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 125/318 (39%), Gaps = 58/318 (18%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D TY+ + G +E+ + N+M C + + YN +I + + K+ RA
Sbjct: 264 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG--CVPDIITYNGLINCYCKFEKMPRA-- 319
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
F+Y +N +P++ +Y+ L AF G M+ L M G+ P+
Sbjct: 320 -FEYFSEMKNNGLKPNVVTYSTLIDAFCKEG--------MMQGAIKLLXDMRRTGLLPNE 370
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYL------------------------ 287
F+ S+I + ++ +A ++ + M GV N +
Sbjct: 371 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 430
Query: 288 -------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
PN Y L+HG R ++A ++ +M P Y S++ +
Sbjct: 431 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 490
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN---------- 390
+EET L EM + + + T++D + G++ +A+ +E+Q+
Sbjct: 491 LEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV 550
Query: 391 LIDGYTYTKLLDVLEDDF 408
LIDG ++++ D F
Sbjct: 551 LIDGLCEAGIVELAVDYF 568
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 140/289 (48%), Gaps = 28/289 (9%)
Query: 127 ASKQPRFRHDAST------YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTI 179
A K R D ST Y+ + L K+ E D+ ++M A F +A+ Y T+
Sbjct: 134 AVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF--PDAITYTTL 191
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
IY F +L A + M +N+ P + YNIL A G ++ +
Sbjct: 192 IYGFCLLGQLMGAFSLLDEMI-LKNI--NPGVYIYNILINALCKEGN--------VKEAK 240
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH---QMGVVYNYLPNSFSYDYL 296
L M +GI+P + + ++++ GY L V +A +IFH QMGV PN +SY+ +
Sbjct: 241 NLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVN----PNVYSYNIM 296
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I+GLC R A L EM K VP + +YNSL+ L +G + + + EM + +
Sbjct: 297 INGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQ 356
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
P D +TY ++LD +C+ +A L +++ + + YTYT L+D L
Sbjct: 357 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 405
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N I+ A+ ++ A+ + K M+ R + + NIL F G+ + V
Sbjct: 13 FNKILGSLAKMKQYLTAISLSKQMEVKG---IRANFVTLNILINCFCHLGQMAFSFSVLG 69
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ ++ G +PD +LN+++KG L V +L FH V + + SY
Sbjct: 70 KILKL--------GYQPDTITLNTLMKGLCLKGEVKKSLH-FHDKVVAQGFQMDHVSYGT 120
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L++GLC G T+ A +L ++ + P+ YN+++ L + V E EM +
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
D ITY T++ C G+ A LL E+ KN+ G Y Y L++ L
Sbjct: 181 IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINAL 230
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 103/251 (41%), Gaps = 45/251 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T++ + ++ A +F M + P++ SYNI+ L + K +
Sbjct: 258 YSTLMDGYCLVGEVQNAKQIFHAM---VQMGVNPNVYSYNIMING-LCKCKR-------V 306
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL 287
+ L ++M++ + PD + NS+I G S + AL + ++M V Y L
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 366
Query: 288 --------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
P ++Y LI GLC GR KNA+EL + KG
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGC 426
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+Y ++S L G +E + +M + + +T+ ++ + + +A K
Sbjct: 427 CIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEK 486
Query: 382 LLKELQNKNLI 392
LL E+ K L+
Sbjct: 487 LLHEMIAKGLL 497
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 17/197 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+I YN L G ++ R LF M G+EPD + ++MI GY S
Sbjct: 681 PNIFIYNALVDGLCKSGD--------IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 732
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+V +A +FH+M GV P+SF Y+ L+HG C +G + A L EM +KGF ++
Sbjct: 733 NVAEAFSLFHEMPSKGVQ----PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TT 787
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
S+N+L+ + +++E + EMI KQ D +TY TV+D C+ G+ EA L KE
Sbjct: 788 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 847
Query: 386 LQNKNLI-DGYTYTKLL 401
+Q +NLI D TYT L+
Sbjct: 848 MQERNLIVDTVTYTSLM 864
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 18/219 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ I +++ K++ A KY + P+ Y +L G M
Sbjct: 546 FGAFILGYSKTGKMTEAA---KYFDEMLDHGLMPNNPLYTVLINGHFKAGN-------LM 595
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
E + +F+++ G+ PD+ + ++ I G + + V +AL++F ++ G+V P+ F+
Sbjct: 596 EALS-IFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV----PDVFT 650
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI G C QG + A EL DEM KG P+ YN+LV L +G+++ K M
Sbjct: 651 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 710
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
EK D +TY T++D C+ EA L E+ +K +
Sbjct: 711 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 749
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 22/255 (8%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
AAK + EM D LY +I +A L A+ +F+ + L
Sbjct: 562 AAKYFDEMLD--------HGLMPNNPLYTVLINGHFKAGNLMEALSIFRRL---HALGVL 610
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P +++ + L G+ E ++ +F ++ G+ PD+F+ +S+I G+
Sbjct: 611 PDVQTCSAFIHGLLKNGR-------VQEALK-VFSELKEKGLVPDVFTYSSLISGFCKQG 662
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V A + +M + PN F Y+ L+ GLC G + AR+L D M KG P S +Y
Sbjct: 663 EVEKAFELHDEM-CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 721
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQ-RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
++++ + V E EM K +P F+ Y ++ C+ G +AM L +E+
Sbjct: 722 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV-YNALVHGCCKEGDMEKAMNLFREML 780
Query: 388 NKNLIDGYTYTKLLD 402
K ++ L+D
Sbjct: 781 QKGFATTLSFNTLID 795
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 142/336 (42%), Gaps = 49/336 (14%)
Query: 96 SELPPRFNNEELCNVMTLQE--DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
S +P + N + + V+ + DP L+ F W+ Q ++ I+ +L ++++
Sbjct: 63 SHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELF 122
Query: 154 QEMDDVVNQMLATP---------------SFCGTE-ALYNTIIYFFAEARKLSRAVYVFK 197
+ V+ QM+ TP ++ G+ +++ +I + L A VF
Sbjct: 123 GLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFF 182
Query: 198 YMKNSRNL----ECRPSIRS-------------YNILFTAFLSRGKNTYINHVYMETIRC 240
KN L C ++ YN + A + TY Y+ C
Sbjct: 183 VAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTY---TYLVGALC 239
Query: 241 ----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
+ +M G+ P+ F + +I+G +++A+ + MG +PN+
Sbjct: 240 KTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMG-EKGLVPNT 298
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
++Y + GLC R A+ +EM++ G P + ++L+ G+++E ++
Sbjct: 299 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 358
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
M+ P++ ITY ++ +C+ G+ +A ++LK +
Sbjct: 359 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGM 394
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I+ + K+ +A + K M L C+P+ R++ +L Y M
Sbjct: 371 YNVLIHGLCKFGKMEKAAEILKGM---VTLGCKPNSRTFCLLIEG--------YCREHNM 419
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M + P S +MI G ++ A ++ +M PN Y
Sbjct: 420 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM-TFSGLKPNVVVYSI 478
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI ++GR + AR L D M G P YN+++S L+ G++EE L E+ +
Sbjct: 479 LIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 538
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D +T+ + + G+ EA K E+ + L+
Sbjct: 539 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 575
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 13/226 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I + ++ ++ A +F M + +P YN L G M
Sbjct: 721 YSTMIDGYCKSENVAEAFSLFHEMPSKG---VQPHSFVYNALVHGCCKEGD--------M 769
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF++M+ G + S N++I GY S + +A ++F +M + +P+ +Y
Sbjct: 770 EKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEM-IAKQIMPDHVTYTT 827
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I C G+ + A L EM+ + + + +Y SL+ G+ E +M+ K
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
D +TY V+ C+ EA KL E+ K ++ T LL
Sbjct: 888 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLL 933
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 131/298 (43%), Gaps = 38/298 (12%)
Query: 108 CNVMTLQEDPLVC--LELFNW----ASKQPRFRHDASTYHIMTRKL-------GAAKMYQ 154
CN +L +D L C +ELF W + D TY + L GA ++
Sbjct: 196 CN--SLLKDLLKCGMMELF-WKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLI 252
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
EMD+ E +Y+ +I + + AV + + M + P+ +Y
Sbjct: 253 EMDE--------KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLV---PNTYTY 301
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
I+ TA L R K M + F++M G++PD + +++I G++ +++ L
Sbjct: 302 TII-TAGLCRAKR-------MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVL 353
Query: 275 RIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
RI M V +P N +Y+ LIHGLC G+ + A E+ M G P+S+++ L+
Sbjct: 354 RIKDVM--VSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIE 411
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ ++ L EM ++ ++Y +++ +C A KLL+++ L
Sbjct: 412 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 469
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 102/236 (43%), Gaps = 14/236 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I + ++ K+ A +F+ M + + P +Y + GK M
Sbjct: 790 FNTLIDGYCKSCKIQEASQLFQEMIAKQIM---PDHVTYTTVIDWHCKAGK--------M 838
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LFK+M + D + S++ GY ++ +F +M V P+ +Y
Sbjct: 839 EEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKM-VAKGVKPDEVTYGL 897
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+ C + A +L DE+ KG + ++ L++AL ++ E K L EM E
Sbjct: 898 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 957
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNS 411
T++ G+ EA ++ + +++ L+ T L+D++ + ++
Sbjct: 958 LKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVP--DTTTLIDLVNGNLNDT 1011
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 23/326 (7%)
Query: 83 KPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHI 142
KP D + R +++ + P +LC ++ L D +ELF WA Q + H Y++
Sbjct: 80 KP-FDLPELRTSLTRITPY----QLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYM 134
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS 202
+ KLGAA ++ D ++ QM E+L+ I+ + A +A + M+
Sbjct: 135 LIDKLGAAGEFKTTDALLMQM-KQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGV 193
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
+ C P+ RSYN++ L+ + +V+ E M++ GI P +++ ++K
Sbjct: 194 YS--CEPTFRSYNVVLDVLLAGNCPKVVPNVFYE--------MLSKGISPTVYTFGVVMK 243
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
L N V+ A + M + +PN+ Y LIH L GR +L +EM G +
Sbjct: 244 ALCLVNEVDSACALLKDM-TRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCI 302
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P ++N + L + E K + M+ + + TY ++ +CR G+ EA L
Sbjct: 303 PDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 362
Query: 383 LKELQNKN------LIDGYTYTKLLD 402
L ++ N N LI+GY LD
Sbjct: 363 LNKVPNPNVVLFNTLINGYVSRGRLD 388
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 127/265 (47%), Gaps = 16/265 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY I+ + +E +V+++M + YN +I + K+ A+ +F
Sbjct: 444 TYTILIDRFCKEGRLEEARNVLDEM-SGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 502
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + C+P I ++N L K E L++ M+ +G+ + + N
Sbjct: 503 MSSK---GCKPDIFTFNSLIFGLCKVNK--------FEEALGLYQDMLLEGVIANTITYN 551
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMK 317
++I ++ + +AL++ + M ++ P + +Y+ LI LC G + L ++M
Sbjct: 552 TLIHAFLRRGAMQEALKLVNDM--LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 609
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG P++ S N L++ L G ++ ++ L +MI + D +TY ++++ +C+ GRA
Sbjct: 610 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 669
Query: 378 EAMKLLKELQNKNLI-DGYTYTKLL 401
EA+ L +LQ + + D TY L+
Sbjct: 670 EALNLFDKLQVEGICPDAITYNTLI 694
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 17/267 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +T++ L E +V++ML F Y +++ K+ A +
Sbjct: 304 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLR-GFTPNSFTYGVLMHGLCRMGKVDEARML 362
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ N P++ +N L ++SRG+ V E+ M++ G PDIF
Sbjct: 363 LNKVPN-------PNVVLFNTLINGYVSRGRLDEAKAVMHES-------MLSVGCGPDIF 408
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N++I G ++ A + ++M + PN +Y LI C +GR + AR + DE
Sbjct: 409 TYNTLILGLCKKGYLVSARELMNEMQI-KGCEPNVITYTILIDRFCKEGRLEEARNVLDE 467
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M KG ++ YN L+SAL + +V++ + +M K D T+ +++ +C+ +
Sbjct: 468 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 527
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
EA+ L +++ + +I + TY L+
Sbjct: 528 FEEALGLYQDMLLEGVIANTITYNTLI 554
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N++I+ + K A+ +++ M + + +YN L AFL RG M
Sbjct: 515 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIA---NTITYNTLIHAFLRRGA--------M 563
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L M+ G D + N +IK + ++ L +F M + PN+ S +
Sbjct: 564 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM-MSKGLNPNNISCNI 622
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC G ++A E +M +G P +YNSL++ L G +E + NL++ ++ +
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL-NLFDKLQVE 681
Query: 356 RPV-DFITYRTVLDEICRRGRAGEAMKLL 383
D ITY T++ C+ G +A LL
Sbjct: 682 GICPDAITYNTLISWHCKEGMFDDAHLLL 710
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ D T++ + L ++E + ML T YNT+I+ F + A+
Sbjct: 509 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT-ITYNTLIHAFLRRGAMQEAL 567
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
K + + C +YN L A L R N +E LF+ M++ G+ P+
Sbjct: 568 ---KLVNDMLFRGCPLDDITYNGLIKA-LCRAGN-------IEKGLALFEDMMSKGLNPN 616
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
S N +I G + ++ AL M + P+ +Y+ LI+GLC GR + A L
Sbjct: 617 NISCNILINGLCRTGNIQHALEFLRDM-IHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 675
Query: 314 DEMKRKGFVPSSKSYNSLVS 333
D+++ +G P + +YN+L+S
Sbjct: 676 DKLQVEGICPDAITYNTLIS 695
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
TY+ + QE +VN ML P + YN +I A + + + +F
Sbjct: 549 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL---DDITYNGLIKALCRAGNIEKGLALF 605
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
+ M S+ L P+ S NIL G I H +E +R M++ G+ PDI +
Sbjct: 606 EDMM-SKGLN--PNNISCNILINGLCRTGN---IQHA-LEFLR----DMIHRGLTPDIVT 654
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
NS+I G + +AL +F ++ V P++ +Y+ LI C +G +A L
Sbjct: 655 YNSLINGLCKTGRAQEALNLFDKLQV-EGICPDAITYNTLISWHCKEGMFDDAHLLLSRG 713
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVE 342
GF+P+ ++ LVS G+ E
Sbjct: 714 VDSGFIPNEVTWYILVSNFIKEGDQE 739
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 167/373 (44%), Gaps = 67/373 (17%)
Query: 78 SKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDA 137
S PA + T + P ++E N++ + DP LE+FN ++Q F H+
Sbjct: 34 SPKPDPPATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNN 93
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-TEALYNTIIYFFAEARKLSRAVYVF 196
+TY + KL +K +Q +D V++QM T C E ++ ++ F++ R V +F
Sbjct: 94 ATYATILHKLAKSKKFQAIDAVLHQM--TYETCKFHEGIFLNLMKHFSKLSLHERVVEMF 151
Query: 197 ---------------------------------KYMKNS-RNLECRPSIRSYNILF---- 218
K++ NS ++L P+ +NIL
Sbjct: 152 DAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHC 211
Query: 219 ------TAF-----LSRGKNTYINHVYMETI---RC----------LFKQMVN-DGIEPD 253
+AF + + +Y N + T+ C LF++MV+ D I PD
Sbjct: 212 KNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPD 271
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ N++I G+ V+ AL+I M PN F+Y L++G C +GR + A+E+
Sbjct: 272 ALTYNALINGFCHGEKVDRALKIMEFMK-KNGCNPNVFNYSALMNGFCKEGRLEEAKEVF 330
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEMK G P + Y +L++ G V+E ++ L +M E + D +T+ +L +CR
Sbjct: 331 DEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCRE 390
Query: 374 GRAGEAMKLLKEL 386
GR EA +L+ L
Sbjct: 391 GRFEEARGMLERL 403
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 120/250 (48%), Gaps = 13/250 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + L + +E ++ +M++ YN +I F K+ RA+ + ++
Sbjct: 238 TYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEF 297
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
MK + C P++ +Y+ L F G+ +E + +F +M + G++PD
Sbjct: 298 MKKNG---CNPNVFNYSALMNGFCKEGR--------LEEAKEVFDEMKSLGLKPDTVGYT 346
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I + + V++A+ + M ++ +++ ++ GLC +GR + AR + + +
Sbjct: 347 TLINFFCRAGRVDEAMELLKDMRE-NKCRADTVTFNVILGGLCREGRFEEARGMLERLPY 405
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G + SY ++++L GE+++ + + M+ + F T +L +C G+ G+
Sbjct: 406 EGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGD 465
Query: 379 A-MKLLKELQ 387
A M LL L+
Sbjct: 466 AVMALLGLLE 475
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 18/288 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
+ +F WA Q + H YH++ KLGAAK ++ +D ++ Q + E+L+ I+
Sbjct: 86 MAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQ-IKEEGIAFRESLFICIM 144
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
++ A +A + MK C P+ +SYN++ +S + +V+ E
Sbjct: 145 KYYGRANLPGQATRMLLDMKGVYC--CEPTFKSYNVVLDILVSANCPSVAANVFYE---- 198
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
M++ G+ P +++ ++K + N V++A + M + +PNS Y LIH L
Sbjct: 199 ----MLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDM-TKHGCVPNSVVYQTLIHAL 253
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ R A +L +EM G +P ++N ++ L + E K + M+ + +
Sbjct: 254 SKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPND 313
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKN------LIDGYTYTKLLD 402
ITY +++ +CR G+ EA LL ++ N LI+GY + LD
Sbjct: 314 ITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLD 361
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 136/306 (44%), Gaps = 53/306 (17%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLS 190
R D T++ + L + D+VN M A TP+ Y T++ F + +L
Sbjct: 377 RPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNL----ITYTTLLDGFCKKNQLE 432
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A YV M +++ E +I YN+L A GK + + +M + G
Sbjct: 433 EAGYVLNEM-SAKGFEL--NIMGYNVLLRALCKNGK--------VPKALDMLGEMSDKGC 481
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV-----YNYLPNSF----------- 291
+PDIF+ N++I G + DAL ++ M GV+ YN L ++F
Sbjct: 482 KPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALK 541
Query: 292 ---------------SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
+Y+ LI C G T+ A L DEM RK VPS+ S N L++ L
Sbjct: 542 LVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLC 601
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGY 395
G+V ++ L +MI + D +TY ++++ +C+ G EA L +LQ + + D
Sbjct: 602 RVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAI 661
Query: 396 TYTKLL 401
TY L+
Sbjct: 662 TYNTLI 667
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 20/273 (7%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSR 191
F + Y+++ R L + D++ +M + C + +NT+I+ + +
Sbjct: 446 FELNIMGYNVLLRALCKNGKVPKALDMLGEM--SDKGCKPDIFTFNTLIFGLCKVDRKED 503
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ +++ M + + +YN L AFL G E ++ L M+ G
Sbjct: 504 ALALYRDMLLDGVIA---NTVTYNTLIHAFLRGG-------AIQEALK-LVNDMLFRGCP 552
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
D + N +IK + AL +F +M V + +P++ S + LI+GLC G+ NA E
Sbjct: 553 LDEITYNGLIKAFCKLGATEKALGLFDEM-VRKDLVPSNISCNLLINGLCRVGKVCNALE 611
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ--RPVDFITYRTVLDE 369
L +M +G P +YNSL++ L G + E NL+ ++ + +P D ITY T++
Sbjct: 612 LLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF-NLFNKLQAEGIQP-DAITYNTLICW 669
Query: 370 ICRRGRAGEA-MKLLKELQNKNLIDGYTYTKLL 401
CR G +A + LL+ ++N + + T+ L+
Sbjct: 670 HCRAGMFDDAYLLLLRGVENAFIPNDVTWYILV 702
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 1/158 (0%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
++N P+ +I GY+ S +++A + + P+ F+++ LIHGLC +G
Sbjct: 335 LLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKG 394
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+A ++ ++M G P+ +Y +L+ ++EE L EM K ++ + Y
Sbjct: 395 LMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYN 454
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+L +C+ G+ +A+ +L E+ +K D +T+ L+
Sbjct: 455 VLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLI 492
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 96/235 (40%), Gaps = 31/235 (13%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
TY+ + QE +VN ML P E YN +I F + +A+ +F
Sbjct: 522 TYNTLIHAFLRGGAIQEALKLVNDMLFRGCPL---DEITYNGLIKAFCKLGATEKALGLF 578
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M + PS S N+L GK N + L + M++ G+ PD+ +
Sbjct: 579 DEMVRK---DLVPSNISCNLLINGLCRVGK--VCNALE------LLRDMIHRGLAPDVVT 627
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
NS+I G ++ +A +F+++ P++ +Y+ LI C G +A L
Sbjct: 628 YNSLINGLCKMGNIREAFNLFNKLQA-EGIQPDAITYNTLICWHCRAGMFDDAYLLLLRG 686
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
F+P+ ++ LVS N + I K+ + F T + V+ IC
Sbjct: 687 VENAFIPNDVTWYILVS-------------NFIKEIGKENGISFGTAK-VIPSIC 727
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 127/270 (47%), Gaps = 20/270 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D+ +Y I+ L A E + +ML TPS YN +I+ A L A
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPS----AVTYNVVIHGMCLAYTLDEA 239
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +FK M R+ CRPS ++NIL A RGK M+ L K+M +DG P
Sbjct: 240 LELFKSM---RSKGCRPSRFTFNILIDAHCKRGK--------MDEAFRLLKRMTDDGHVP 288
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + +++I G V+DA + M V P + + LIHGLC GR K ARE+
Sbjct: 289 DVVTYSTLISGLCSIARVDDARHLLEDM-VKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M G P +YN+LV G+ E + L +M+ + + +TY ++ +C+
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407
Query: 373 RGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
R EA + ++++ +TYT L+
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALI 437
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D+ +Y I+ L A + D+ ++L TPS Y ++I+ A A
Sbjct: 9 DSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPS----TVAYTSLIHGLCMANSFDDA 64
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F M N R C PS +YN++ A RG +E L K+M+ DG P
Sbjct: 65 RELFADM-NRRG--CPPSPVTYNVIIDASCKRG--------MLEEACDLIKKMIEDGHVP 113
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + N+++ G S V +AL +F++M + PN S++ +I GLC Q + A ++
Sbjct: 114 DVVTYNTVMDGLCKSGRVEEALLLFNEMERL-GCTPNRRSHNTIILGLCQQSKIDQACQV 172
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ----------------- 355
EM+ + P S SY L+ LA G++ E K M++
Sbjct: 173 FHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCL 232
Query: 356 -------------------RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
RP F T+ ++D C+RG+ EA +LLK + + + D
Sbjct: 233 AYTLDEALELFKSMRSKGCRPSRF-TFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVV 291
Query: 396 TYTKLLDVL 404
TY+ L+ L
Sbjct: 292 TYSTLISGL 300
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ PD +S +I G + +NDA +F ++ + P++ +Y LIHGLC +A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKL-LHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
REL +M R+G PS +YN ++ A G +EE + +MIE D +TY TV+D
Sbjct: 65 RELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 370 ICRRGRAGEAMKLLKELQ 387
+C+ GR EA+ L E++
Sbjct: 125 LCKSGRVEEALLLFNEME 142
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I A+A KL+ A +F+ M +S PS +YN++ + +
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDS---GITPSAVTYNVVIHGMC-------LAYTLD 237
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + LFK M + G P F+ N +I + +++A R+ +M ++P+ +Y
Sbjct: 238 EALE-LFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRM-TDDGHVPDVVTYST 295
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC+ R +AR L ++M ++ P+ + N+L+ L G ++E + L M+
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+ D +TY T++ CR G+ A +LL ++ + L TYT L+ L
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
NT+I+ +A ++ A V M +S P + +YN L G+ E
Sbjct: 329 NTLIHGLCKAGRIKEAREVLDAMVSSGQ---SPDVVTYNTLVHGHCRAGQT--------E 377
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
R L MV G+ P++ + +++ G +N + +A +F QM PN F+Y L
Sbjct: 378 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM-KSSGCAPNLFTYTAL 436
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I G C+ G+ +L EM G P Y +L + L +G ++ L E E R
Sbjct: 437 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 496
Query: 357 PVDFI--TYRTVLDEICRRGRAGEAMKLLKEL 386
+ YR +D + G+ A+ ++++
Sbjct: 497 SEAWGDEVYRFAVDGLLDAGKMEMALGFVRDM 528
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
N P+S+SY LI GL G+ +AR+L ++ G PS+ +Y SL+ L + ++
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDV 403
+ +M + P +TY ++D C+RG EA L+K++ ++ ++ D TY ++D
Sbjct: 65 RELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 404 L 404
L
Sbjct: 125 L 125
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 154/339 (45%), Gaps = 46/339 (13%)
Query: 98 LPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD 157
+ P + + V+ Q+DP+ LE+FN K+ F+H STY + KLG ++ M+
Sbjct: 1 MGPPLLPKHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAME 60
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
+V+ M E +Y + + K+ AV VF+ M +C P++ SYN +
Sbjct: 61 EVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDF---YDCEPTVFSYNAI 117
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+ + G + VYM +M + GI PD++S +K + ++ + ALR+
Sbjct: 118 MSILVDSGYFDQAHKVYM--------RMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLL 169
Query: 278 HQMG-------------VVYNYLPNSF---------------------SYDYLIHGLCAQ 303
+ M VV + +F +++ L+H LC +
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKK 229
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G K +L D++ ++G +P+ +YN + L GE++ V+ + +I++ D +TY
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTY 289
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++ +C+ + EA L +L N+ L D +TY L+
Sbjct: 290 NYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLI 328
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 36/285 (12%)
Query: 141 HIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMK 200
H++ +K + + +D V+ + + F YN I + +L AV + +
Sbjct: 224 HVLCKKGDVKECEKLLDKVIKRGVLPNLFT-----YNFFIQGLCQKGELDAAVRMVGRLI 278
Query: 201 NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM 260
+ +P + +YN L K + ++VN+G+EPD F+ N++
Sbjct: 279 DQGP---KPDVVTYNYLIYGLCKNSK--------FQEAEVYLGKLVNEGLEPDSFTYNTL 327
Query: 261 IKGYILSNHVNDALRIFHQMGVVYN-YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
I GY V A RI + V+N ++P+ F+Y LI GLC +G T A L +E K
Sbjct: 328 IAGYCKGGMVQLAERIL--VNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G P+ YN+L+ L+ G + E + EM EK + T+ +++ +C+ G +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 380 MKLLKELQNKN----------LIDGYTYT-------KLLDVLEDD 407
L+K + +K LI GY+ ++LDV+ D+
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDN 490
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 137/298 (45%), Gaps = 21/298 (7%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV-VNQMLA 165
LC QE + +L N D+ TY+ + M Q + + VN +
Sbjct: 296 LCKNSKFQEAEVYLGKLVNEG-----LEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFN 350
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
F E Y ++I + +RA+ +F + +P++ YN L ++G
Sbjct: 351 --GFVPDEFTYRSLIDGLCHEGETNRALALFN---EALGKGIKPNVILYNTLIKGLSNQG 405
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+ +E + L +M G+ P++ + N ++ G V+DA + M +
Sbjct: 406 -------LILEAAQ-LASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM-ISKG 456
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
Y P+ F+++ LIHG Q + +NA E+ D M G P +YNSL++ L + E+ +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVM 516
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ M+EK + T+ +L+ +CR + +A+ LL+E++NK++ D T+ L+D
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLID 574
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 18/227 (7%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LYNT+I + + A + M + P ++++NIL G
Sbjct: 393 LYNTLIKGLSNQGLILEAAQLASEMSEKGLI---PEVQTFNILVNGLCKMG--------C 441
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
+ L K M++ G PDIF+ N +I GY + +AL I M GV P+ +
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVD----PDVY 497
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ L++GLC + ++ E M KG P+ ++N L+ +L ++++ + L EM
Sbjct: 498 TYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEM 557
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYT 398
K D +T+ T++D C+ G A L ++++ ++ T T
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPT 604
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 101/266 (37%), Gaps = 50/266 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ + K + +K M C P++ ++NIL + K +
Sbjct: 499 YNSLLNGLCKTSKYEDVMETYKTMVEKG---CAPNLFTFNILLESLCRYHK--------L 547
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY---------NY 286
+ L ++M N + PD + ++I G+ + ++ A +F +M VY N
Sbjct: 548 DKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNI 607
Query: 287 L--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+ P+ ++Y ++ G C G + EM G
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENG 667
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
F+PS + +++ L + V E + M++K + + T+ D +
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN--TIFDH--DKKEVAAPK 723
Query: 381 KLLKELQNKNLIDGYTYTKLLDVLED 406
+L++L K+ I Y Y L D L D
Sbjct: 724 LVLEDLLKKSCITYYAYELLFDGLRD 749
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 127/270 (47%), Gaps = 20/270 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D+ +Y I+ L A E + +ML TPS YN +I+ A L A
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPS----AVTYNVVIHGMCLAYTLDEA 239
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +FK M R+ CRPS ++NIL A RGK E R L K+M +DG P
Sbjct: 240 LELFKSM---RSKGCRPSRFTFNILIDAHCKRGK-------LDEAFR-LLKRMTDDGHVP 288
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + +++I G V+DA + M V P + + LIHGLC GR K ARE+
Sbjct: 289 DVVTYSTLISGLCSIARVDDARHLLEDM-VKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M G P +YN+LV G+ E + L +M+ + + +TY ++ +C+
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407
Query: 373 RGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
R EA + ++++ +TYT L+
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALI 437
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D+ +Y I+ L A + ++ ++L TPS Y ++I+ A A
Sbjct: 9 DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS----TVAYTSLIHGLCMANSFDDA 64
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F M N R C PS +YN++ A RG +E L K+M+ DG P
Sbjct: 65 RELFADM-NRRG--CPPSPVTYNVMIDASCKRG--------MLEEACDLIKKMIEDGHVP 113
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + N+++ G S+ V +AL +F++M + PN S++ +I GLC Q + A ++
Sbjct: 114 DVVTYNTVMDGLCKSSRVEEALLLFNEMERL-GCTPNRRSHNTIILGLCQQSKIDQACQV 172
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM+ K P S SY L+ LA G++ E K M++ +TY V+ +C
Sbjct: 173 FHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCL 232
Query: 373 RGRAGEAMKLLKELQNKNLIDG-YTYTKLLDV 403
EA++L K +++K +T+ L+D
Sbjct: 233 AYTLDEALELFKSMRSKGCRPSRFTFNILIDA 264
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I A+A KL+ A +F+ M +S PS +YN++ + +
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDS---GITPSAVTYNVVIHGMC-------LAYTLD 237
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + LFK M + G P F+ N +I + +++A R+ +M ++P+ +Y
Sbjct: 238 EALE-LFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRM-TDDGHVPDVVTYST 295
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC+ R +AR L ++M ++ P+ + N+L+ L G ++E + L M+
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+ D +TY T++ CR G+ A +LL ++ + L TYT L+ L
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 405
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ PD +S +I G + +NDA +F ++ + P++ +Y LIHGLC +A
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKL-LHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
REL +M R+G PS +YN ++ A G +EE + +MIE D +TY TV+D
Sbjct: 65 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 370 ICRRGRAGEAMKLLKELQ 387
+C+ R EA+ L E++
Sbjct: 125 LCKSSRVEEALLLFNEME 142
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
NT+I+ +A ++ A V M +S P + +YN L G+ E
Sbjct: 329 NTLIHGLCKAGRIKEAREVLDAMVSSGQ---SPDVVTYNTLVHGHCRAGQT--------E 377
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
R L MV G+ P++ + +++ G +N + +A +F QM PN F+Y L
Sbjct: 378 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM-KSSGCAPNLFTYTAL 436
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I G C+ G+ +L EM G P Y +L + L +G ++ L E E R
Sbjct: 437 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 496
Query: 357 PVDFI--TYRTVLDEICRRGRAGEAMKLLKEL 386
+ YR +D + G+ A+ ++++
Sbjct: 497 SEAWGDEVYRFAVDGLLEAGKMEMALGFVRDM 528
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
N P+S+SY LI GL G+ +AR L ++ G PS+ +Y SL+ L + ++
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDV 403
+ +M + P +TY ++D C+RG EA L+K++ ++ ++ D TY ++D
Sbjct: 65 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 404 L 404
L
Sbjct: 125 L 125
>gi|449441228|ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
gi|449499186|ref|XP_004160743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
Length = 482
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 158/311 (50%), Gaps = 16/311 (5%)
Query: 100 PRFNNEELCNVMTL---QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEM 156
P F+ C V L Q DPL+ E+F++A +QP FR +S+ ++ KLG +K + +
Sbjct: 66 PDFSIGSPCRVQKLIASQSDPLLAKEIFDYACRQPHFRPSSSSLLVLILKLGRSKYFSLI 125
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
DD++ + + T ++ II + EA +A+ VF M + C PS + N
Sbjct: 126 DDLLLS-FKSRRYPVTPTAFSYIIKIYGEADLPDKALKVFYTMID---FGCTPSSKQLNR 181
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
+ +S +I + LFK + G+ P+ S N +I+ + + +++ A +
Sbjct: 182 ILEILVSH--RNFIRPAFD-----LFKNARHHGVLPNTKSYNILIRAFCWNGNISIAYTL 234
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++M N +P+ +Y L+ GLC + + A +L ++M KG++P + SY +L+++L
Sbjct: 235 FNKM-FERNVIPDVETYRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLC 293
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGY 395
++ E K L M K D Y TV+ CR GRA +A K+L+++Q N L +
Sbjct: 294 RKKKLREAYKLLCRMKVKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLV 353
Query: 396 TYTKLLDVLED 406
+Y L + L D
Sbjct: 354 SYESLTNGLCD 364
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ +++ AV + + M N + P SY L + + K + Y
Sbjct: 250 YRTLMQGLCRKNQVNGAVDLLEDMLNKGYI---PDTLSYATLLNSLCRKKK---LREAYK 303
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M G PDI N++I G+ DA +I M LPN SY+
Sbjct: 304 -----LLCRMKVKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQS-NGCLPNLVSYES 357
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L +GLC QG + A+ +EM KGF P ++LV G + E+ L +M+++
Sbjct: 358 LTNGLCDQGMFELAKGYVEEMTLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDMLKRG 417
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ T+ ++ IC + ++ +++ K++
Sbjct: 418 KAPHSDTWEIIISGICEVEDTAKFCEVWEKILKKDV 453
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 33/314 (10%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML----- 164
++ L+EDP + L+ F WA Q FRH +Y I+ + A+MY + D V +++
Sbjct: 136 LLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRM 195
Query: 165 --------------ATPSFC-GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
+T + C +++ + F E L A F M+N R L P
Sbjct: 196 DMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTL---P 252
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
RS N L LS+ N + +R F M+ GI P +F+ N MI
Sbjct: 253 KARSCNFLLHR-LSKSGNG-------QLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 304
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ ++ R+F QM + P+ +Y+ LI G G + L +EMK G VP +YN
Sbjct: 305 LENSRRLFVQMREM-GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYN 363
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
L++ ++ + EM + +TY T++D C+ G A+KL +++
Sbjct: 364 GLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRT 423
Query: 390 NLI-DGYTYTKLLD 402
L+ + +TYT L+D
Sbjct: 424 GLLPNEFTYTSLID 437
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LY +II+ RKL + + MK SR + P I + + A+ GK++ +
Sbjct: 536 LYGSIIWGHCSQRKLEETKLILEEMK-SRGISANPVIST--TIIDAYFKAGKSSDALN-- 590
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
F++M + G+E I + +I G + V A+ F +M + PN Y
Sbjct: 591 ------FFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRM-LSLGLQPNVAVYT 643
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GLC ++A++L DEM+ +G P ++ +L+ +G ++E + + M E
Sbjct: 644 SLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTEL 703
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D Y +++ + G +A K E+ K ++
Sbjct: 704 AIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGIL 741
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I + + L +F MK+ + C P I +YN L N Y M
Sbjct: 327 YNSLIDGYGKVGSLEEVASLFNEMKD---VGCVPDIITYNGLI--------NCYCKFEKM 375
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F +M N+G++P++ + +++I + + A+++F M LPN F+Y
Sbjct: 376 PRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRT-GLLPNEFTYTS 434
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI C G A +L ++M + G + +Y +L+ L G + E + M++
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ Y ++ + R +AMK+LK++ N+
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 530
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 126/318 (39%), Gaps = 58/318 (18%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D TY+ + G +E+ + N+M C + + YN +I + + K+ RA
Sbjct: 323 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG--CVPDIITYNGLINCYCKFEKMPRA-- 378
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
F+Y +N +P++ +Y+ L AF G M+ LF M G+ P+
Sbjct: 379 -FEYFSEMKNNGLKPNVVTYSTLIDAFCKEG--------MMQGAIKLFVDMRRTGLLPNE 429
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYL------------------------ 287
F+ S+I + ++ +A ++ + M GV N +
Sbjct: 430 FTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRS 489
Query: 288 -------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
PN Y L+HG R ++A ++ +M P Y S++ +
Sbjct: 490 MLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRK 549
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN---------- 390
+EET L EM + + + T++D + G++ +A+ +E+Q+
Sbjct: 550 LEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCV 609
Query: 391 LIDGYTYTKLLDVLEDDF 408
LIDG ++++ D F
Sbjct: 610 LIDGLCKAGIVELAVDYF 627
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 104/266 (39%), Gaps = 48/266 (18%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y ++I +A L+ A +K + + + +I +Y L G+
Sbjct: 429 EFTYTSLIDANCKAGNLTEA---WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEE 485
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
V F+ M+ DGI P+ +++ GYI + + DA++I QM N P+
Sbjct: 486 V--------FRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTEC-NIKPDLIL 536
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKG--------------FVPSSKS----------- 327
Y +I G C+Q + + + + +EMK +G + + KS
Sbjct: 537 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 596
Query: 328 ----------YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
Y L+ L G VE V M+ + Y +++D +C+
Sbjct: 597 DVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIE 656
Query: 378 EAMKLLKELQNKNLIDGYT-YTKLLD 402
A KL E+Q + + T +T L+D
Sbjct: 657 SAKKLFDEMQCRGMTPDITAFTALID 682
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 152/334 (45%), Gaps = 35/334 (10%)
Query: 98 LPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD 157
P + + + ++ +++P LF+ A++ P + H A YH + R+L A+M +
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVG 63
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
+V + + C E + ++I + + RA+ VFK M+ C P IRSYN L
Sbjct: 64 RIVELIRSQECKC-DEDVALSVIKTYGKNSMPDRALDVFKRMREI--FGCEPGIRSYNTL 120
Query: 218 FTAFLSRGKNTYINHVY---------------------------METIRCLFKQMVNDGI 250
AF+ + + ++ E R M +G
Sbjct: 121 LNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGF 180
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+PD+FS +++I + ++DAL +F +M P+ Y+ LI G + K A
Sbjct: 181 KPDVFSYSTVINDLAKTGKLDDALELFDEMS-ERRVAPDVTCYNILIDGFLKEKDHKMAM 239
Query: 311 ELCDEMKRKGFV-PSSKSYNSLVSALALNGEVEETVKNLWE-MIEKQRPVDFITYRTVLD 368
+L D++ V P+ K++N ++S L+ G V++ +K +W+ M + +R D TY +++
Sbjct: 240 QLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK-IWDRMKQNEREKDLYTYSSLIH 298
Query: 369 EICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
+C G +A + EL + K ID TY +L
Sbjct: 299 GLCDEGNVDKAESVFNELVERKAFIDVVTYNTML 332
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 131/333 (39%), Gaps = 69/333 (20%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI 179
CL++++ KQ D TY + L + + V N+++ +F YNT+
Sbjct: 274 CLKIWD-RMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDV-VTYNTM 331
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------------- 226
+ F K+ ++ +++ M+ ++ +I SYNIL L GK
Sbjct: 332 LGGFCRCGKIKESLELWRIMEQRNSV----NIVSYNILIKGLLENGKIDEATMIWRLMPA 387
Query: 227 -------------------NTYIN------------------HVYMETIRCL-------- 241
N Y+N + Y I CL
Sbjct: 388 KGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEE 447
Query: 242 ----FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
K+M G+E + N++I G I + ++DA + MG LP SY+ LI
Sbjct: 448 ASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGK-NGCLPTVVSYNILI 506
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GLC G+ A EM G P K+Y+ L+ L + ++E ++ + ++
Sbjct: 507 CGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLE 566
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
D + + ++ +C G+ +AM ++ ++++N
Sbjct: 567 PDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 126/302 (41%), Gaps = 49/302 (16%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+++ + K +++ +N M F Y+T+I A+ KL A+ +F
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLNWMW-KEGFKPDVFSYSTVINDLAKTGKLDDALELFDE 209
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M R P + YNIL FL + ++ K + + + P++ + N
Sbjct: 210 MSERR---VAPDVTCYNILIDGFLKEKDHKMAMQLW-------DKLLEDSSVYPNVKTHN 259
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM-K 317
MI G V+D L+I+ +M + ++Y LIHGLC +G A + +E+ +
Sbjct: 260 IMISGLSKCGRVDDCLKIWDRMKQ-NEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVE 318
Query: 318 RKGFVPSSK---------------------------------SYNSLVSALALNGEVEET 344
RK F+ SYN L+ L NG+++E
Sbjct: 319 RKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIVSYNILIKGLLENGKIDEA 378
Query: 345 VKNLWEMI-EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+W ++ K D TY + +C G +A+ +++E+++K +D Y Y ++D
Sbjct: 379 TM-IWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIID 437
Query: 403 VL 404
L
Sbjct: 438 CL 439
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 119/269 (44%), Gaps = 20/269 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LELF+ S++ R D + Y+I+ K ++ + +++L S +N +I
Sbjct: 204 LELFDEMSER-RVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMI 262
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
++ ++ + ++ MK + E + +Y+ L G ++
Sbjct: 263 SGLSKCGRVDDCLKIWDRMKQN---EREKDLYTYSSLIHGLCDEGN--------VDKAES 311
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL---RIFHQMGVVYNYLPNSFSYDYLI 297
+F ++V D+ + N+M+ G+ + ++L RI Q V N SY+ LI
Sbjct: 312 VFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV-----NIVSYNILI 366
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GL G+ A + M KG+ + +Y + L +NG V + + + E+ K
Sbjct: 367 KGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGH 426
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+D Y +++D +C++ R EA L+KE+
Sbjct: 427 LDVYAYASIIDCLCKKRRLEEASNLVKEM 455
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 21/230 (9%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYM-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
N +I +LS A + + M KN C P++ SYNIL GK
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNG----CLPTVVSYNILICGLCEAGK--------F 515
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
K+M+ +G++PD+ + + ++ G + AL ++HQ + P+ ++
Sbjct: 516 GEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQF-LQSGLEPDVMMHNI 574
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA-LALNGEVEETVKNLWEMIEK 354
LIHGLC+ G+ +A + M+ + + +YN+L+ + TV +W + K
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATV--IWGYMYK 632
Query: 355 Q--RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+P D I+Y T+L +C R A++ + +N + YT+ L+
Sbjct: 633 MGLQP-DIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILV 681
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 47/196 (23%)
Query: 176 YNTIIYFFAEARKLSRA-VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
YN +I EA K A +V + ++N +P +++Y+IL K
Sbjct: 502 YNILICGLCEAGKFGEASAFVKEMLENG----LKPDLKTYSILLGGLCRDRK-------- 549
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-------------- 280
+E L+ Q + G+EPD+ N +I G ++DA+ + M
Sbjct: 550 IELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609
Query: 281 --------------GVVYNYL------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
V++ Y+ P+ SY+ ++ GLC R A E D+ + G
Sbjct: 610 LMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHG 669
Query: 321 FVPSSKSYNSLVSALA 336
P+ ++N LV A+
Sbjct: 670 IFPTVYTWNILVRAVV 685
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
S+IK Y ++ + AL +F +M ++ P SY+ L++ + L +
Sbjct: 83 SVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNL-WEMIEKQRPVDFITYRTVLDEICRRGRAG 377
G P+ ++YN L+ E E+ L W E +P D +Y TV++++ + G+
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKP-DVFSYSTVINDLAKTGKLD 201
Query: 378 EAMKLLKELQNKNLIDGYT-YTKLLD 402
+A++L E+ + + T Y L+D
Sbjct: 202 DALELFDEMSERRVAPDVTCYNILID 227
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 153/337 (45%), Gaps = 41/337 (12%)
Query: 98 LPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD 157
P + + + ++ +++P LF+ A++ P + H A YH + R+L +M +
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVS 63
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
+V + + C E + ++I + + +A+ VFK M+ C P+IRSYN L
Sbjct: 64 RIVELIRSQECKC-DEDVALSVIKTYGKNSMPDQALDVFKRMREI--FGCEPAIRSYNTL 120
Query: 218 FTAFLSRGKNTYINHVY---------------------------METIRCLFKQMVNDGI 250
AF+ + + ++ E R M +G
Sbjct: 121 LNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGF 180
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+PD+FS +++I + ++DAL +F +M GV P+ Y+ LI G + K
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA----PDVTCYNILIDGFLKEKDHK 236
Query: 308 NARELCDEMKRKGFV-PSSKSYNSLVSALALNGEVEETVKNLWE-MIEKQRPVDFITYRT 365
A EL D + V P+ K++N ++S L+ G V++ +K +WE M + +R D TY +
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK-IWERMKQNEREKDLYTYSS 295
Query: 366 VLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
++ +C G +A + EL + K ID TY +L
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML 332
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 20/285 (7%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI 179
CL+++ KQ D TY + L A + + V N++ + YNT+
Sbjct: 274 CLKIWE-RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDV-VTYNTM 331
Query: 180 IYFFAEARKLSRAVYVFKYM--KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
+ F K+ ++ +++ M KNS N I SYNIL L GK I+ M
Sbjct: 332 LGGFCRCGKIKESLELWRIMEHKNSVN------IVSYNILIKGLLENGK---IDEATM-- 380
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+++ M G D + I G ++ +VN AL + ++ +L + ++Y +I
Sbjct: 381 ---IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL-DVYAYASII 436
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
LC + R + A L EM + G +S N+L+ L + + E L EM +
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCR 496
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLL 401
++Y ++ +C+ G+ GEA +KE L+N D TY+ LL
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 117/266 (43%), Gaps = 14/266 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LELF+ S++ D + Y+I+ K ++ ++ +++L S +N +I
Sbjct: 204 LELFDEMSERG-VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
++ ++ + +++ MK + E + +Y+ L G ++
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQN---EREKDLYTYSSLIHGLCDAGN--------VDKAES 311
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F ++ D+ + N+M+ G+ + ++L ++ M + N SY+ LI GL
Sbjct: 312 VFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME--HKNSVNIVSYNILIKGL 369
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
G+ A + M KG+ +Y + L +NG V + + + E+ +D
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDV 429
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL 386
Y +++D +C++ R EA L+KE+
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEM 455
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 15/227 (6%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYM-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
N +I +L A + + M KN CRP++ SYNIL GK
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNG----CRPTVVSYNILICGLCKAGK--------F 515
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
K+M+ +G +PD+ + + ++ G ++ AL ++HQ + + ++
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF-LQSGLETDVMMHNI 574
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGLC+ G+ +A + M+ + + +YN+L+ G+ M +
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
D I+Y T++ +C AM+ + +N + YT+ L+
Sbjct: 635 LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
S+IK Y ++ + AL +F +M ++ P SY+ L++ + L +
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNL-WEMIEKQRPVDFITYRTVLDEICRRGRAG 377
G P+ ++YN L+ E E+ L W E +P D +Y TV++++ + G+
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKP-DVFSYSTVINDLAKAGKLD 201
Query: 378 EAMKLLKELQNKNLIDGYT-YTKLLD 402
+A++L E+ + + T Y L+D
Sbjct: 202 DALELFDEMSERGVAPDVTCYNILID 227
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 176/420 (41%), Gaps = 66/420 (15%)
Query: 39 YLSQTQINPHLKLSSNAILCSCYSAIALSRSSSRGVGKRSKADSKPALDDTQFRCA---- 94
Y ++ NP L + A SA AL V K KA +++ Q+ C
Sbjct: 125 YPTKNGFNPSKSLRAKA------SANALVVQQEDTVNKICKA-----IEEDQWECLQDNF 173
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
++ + N + + V+ LQ D L F WA KQ + H+ Y M LG AKM+
Sbjct: 174 LNSMAQDLNPDAVVKVLNLQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFT 233
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI--R 212
E+ ++ +M T T ++ ++ + + + + ++ F MK + P +
Sbjct: 234 ELQSLLQKM-QTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMK---EMGYEPGLIDT 289
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN + + + K ++ LF QM+N+G+ + + SMI+ + L + D
Sbjct: 290 AYNSVLVSLVKNKK--------LDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMED 341
Query: 273 ALRIFHQM--------GVVYNYL--------------------------PNSFSYDYLIH 298
A+++ M V Y + PN ++Y+ LI
Sbjct: 342 AMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQ 401
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLCA R + A EL M++ G P+ +Y L L ++ + E + +
Sbjct: 402 GLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKP 461
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVLEDDFGNSIRHHLR 417
+ +TY T+L+ CR R EAM +LKE+ QN D TYT L+ L GN + LR
Sbjct: 462 NRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQ--GNQLPDALR 519
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 118/285 (41%), Gaps = 40/285 (14%)
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEA 186
Q + D TY I+ L KM ++ V+ +M G E YN +I
Sbjct: 351 QNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMREN----GCEPNIYTYNALIQGLCAV 406
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNIL----------------FTAFLSRG----- 225
R+ A+ + M+ P+I +Y IL F L+RG
Sbjct: 407 RRPEEALELVTLMEQG---GVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNR 463
Query: 226 --KNTYINHVYMETIRCL-----FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
NT +N Y R + K+M + PD + ++I+G + N + DALR+
Sbjct: 464 VTYNTLLNG-YCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHD 522
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
+M Y N + + L GL G K+A MK +GF S+ Y + L+
Sbjct: 523 EM-ENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTA 581
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
GE+EE L+EMI K + TY T++ CR+GR +A +L
Sbjct: 582 GEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAML 626
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 19/247 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY I+T L + ++ N+ LA YNT++ + +L A+ + K
Sbjct: 430 TYTILTHGLCKLRRLDRAKEMFNEALAR-GLKPNRVTYNTLLNGYCRGSRLIEAMDILKE 488
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + +C P +Y L + + + +R + +M N G + + +LN
Sbjct: 489 MHQN---DCTPDHVTYTTLIQGLVQGNQ-------LPDALR-MHDEMENKGYDVNFDTLN 537
Query: 259 SMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +G + DA + +M G Y+ + Y IH L G + A+ L E
Sbjct: 538 ILARGLARVGNHKDASIFYRRMKDRGFAYS----ASDYYLAIHCLSTAGEMEEAQALLYE 593
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M KG+ P+ +YN+++ G +++ L MIE D +Y ++ E +GR
Sbjct: 594 MINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGR 653
Query: 376 AGEAMKL 382
+A +L
Sbjct: 654 TQDADQL 660
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME + L +M+N G P++ + N+MIKG+ ++DA + + M + P++ SY+
Sbjct: 584 MEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFM-IENGIGPDTGSYN 642
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
LI QGRT++A +L +G V + K
Sbjct: 643 ILIKEFHNQGRTQDADQLYATALERGVVLNPK 674
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 13/263 (4%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
KQ + ++ TY + L E ++ ++M+ T +Y T++ F + R
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDT-IVYTTLVDGFCK-RG 788
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
RA F Y +SR++ P + +Y + + F G M LF +M+
Sbjct: 789 DIRAASKFFYEMHSRDI--TPDVLTYTAIISGFCQIGD--------MVEAGKLFHEMLCR 838
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+EPDI + ++ GY + H+ DA R+ + M + PN +Y LI GLC +G +
Sbjct: 839 GLEPDIITFTELMNGYCKAGHIKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDS 897
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A EL EM + G P+ +YNS+V+ L +G +EE VK + E D +TY T++D
Sbjct: 898 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 957
Query: 369 EICRRGRAGEAMKLLKELQNKNL 391
C+ G +A ++L E+ K L
Sbjct: 958 AYCKSGEMDKAQEILTEMLGKGL 980
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 141/322 (43%), Gaps = 33/322 (10%)
Query: 101 RFNNEELCNV-MTLQEDPLVCLELFNWASKQPRFRHDAS--TYHIMTRKLGAAKMYQEMD 157
+F + L V M ++ D + L+ F+WA R R D++ + I+ A+K +
Sbjct: 507 KFKTDHLIWVLMKIKCDYRLVLDFFDWA----RSRRDSNLESLCIVIHLAVASKDLKVAQ 562
Query: 158 DVVNQMLATPSFCGTEAL---YNTIIYFFAEARKLSRAVYVF--------------KYMK 200
+++ P TE+ ++ ++Y + + R VF K +
Sbjct: 563 SLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFE 622
Query: 201 NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM 260
N S+ S N+ + A LS+ N T +F++ G+ ++ S N +
Sbjct: 623 KMLNYGLVLSVDSCNV-YLARLSKDCNK------TATAIIVFREFPEVGVCWNVASYNIV 675
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
I +N+A + M + Y P+ SY +I+G C G +L ++MK+KG
Sbjct: 676 IHFVCQLGRINEAHHLLLLMEL-KGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKG 734
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+S +Y S++ L ++ E + EMI + D I Y T++D C+RG A
Sbjct: 735 LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAAS 794
Query: 381 KLLKELQNKNLI-DGYTYTKLL 401
K E+ ++++ D TYT ++
Sbjct: 795 KFFYEMHSRDITPDVLTYTAII 816
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P++ +Y L G +++ L +M G++P+IF+ NS++ G
Sbjct: 875 CSPNVVTYTTLIDGLCKEGD--------LDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 926
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
S ++ +A+++ + ++ +Y L+ C G A+E+ EM KG P+
Sbjct: 927 SGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIV 985
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++N L++ L+G +E+ K L M+ K + T+ ++ + C R A + K++
Sbjct: 986 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDM 1045
Query: 387 QNKNL-IDGYTYTKLL 401
++ + DG TY L+
Sbjct: 1046 CSRGVEPDGKTYENLV 1061
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 98/230 (42%), Gaps = 18/230 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+I+ ++ + AV K + +Y L A+ G+ M
Sbjct: 917 YNSIVNGLCKSGNIEEAV---KLVGEFEAAGLNADTVTYTTLMDAYCKSGE--------M 965
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + +M+ G++P I + N ++ G+ L + D ++ + M + PN+ +++
Sbjct: 966 DKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM-LAKGIAPNATTFNC 1024
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ C + K A + +M +G P K+Y +LV ++E EM K
Sbjct: 1025 LVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKG 1084
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ------NKNLIDGYTYTK 399
V TY ++ +R + EA ++ +++ +K + D ++ TK
Sbjct: 1085 FSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTK 1134
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 18/274 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R + Y+ + L K+ E D+ ++M A F Y+T+IY F A +L A
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNV-ITYSTLIYGFCLAGQLMEAF 205
Query: 194 YVFKYM--KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
+ M KN P++ +Y IL A GK ++ + L M +G++
Sbjct: 206 GLLNEMILKN-----INPNVYTYTILMDALCKEGK--------VKEAKNLLAVMTKEGVK 252
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++ S N+++ GY L V +A ++FH M V PN +SY+ +I LC R A
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTM-VQKGVNPNVYSYNIMIDRLCKSKRVDEAMN 311
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L E+ K VP++ +Y+SL+ G + + L EM + +P D +TY ++LD +C
Sbjct: 312 LLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALC 371
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +A L +++ + + + YTYT L+D L
Sbjct: 372 KNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 114/216 (52%), Gaps = 10/216 (4%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K+ K ++ + RP++ YN + K+ +N Y L+ +M
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLC---KDKLVNEAY-----DLYSEMDA 178
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI P++ + +++I G+ L+ + +A + ++M ++ N PN ++Y L+ LC +G+ K
Sbjct: 179 RGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEM-ILKNINPNVYTYTILMDALCKEGKVK 237
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A+ L M ++G P+ SYN+L+ L GEV+ + M++K + +Y ++
Sbjct: 238 EAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMI 297
Query: 368 DEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +C+ R EAM LL+E+ +KN++ + TY+ L+D
Sbjct: 298 DRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLID 333
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N I+ + + A+ +FK M+ + +E P + + NIL F G+ T+ V
Sbjct: 13 FNKIVGSLVKMKHYPTAISLFKQMQ-VKGIE--PDLFTLNILINCFCHLGQMTFSFTVLG 69
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ ++ G +P+ +LN+++KG L V +L FH V + + SY
Sbjct: 70 KILKL--------GYQPNTITLNTLMKGLCLKGEVKKSLH-FHDKVVAQGFQMDQVSYAT 120
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L++GLC G T++A +L ++ + P+ YN+++ L + V E EM +
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ ITY T++ C G+ EA LL E+ KN+ + YTYT L+D L
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDAL 230
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 107/220 (48%), Gaps = 18/220 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I +++++ A+ + + + + + P+ +Y+ L F G+ T
Sbjct: 293 YNIMIDRLCKSKRVDEAMNLLREVLHKNMV---PNTVTYSSLIDGFCKLGRIT------- 342
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ L K+M + G D+ + S++ + +++ A +F +M G+ PN ++
Sbjct: 343 -SALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ----PNKYT 397
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC GR KNA++L + KG + +YN ++S L G ++E + +M
Sbjct: 398 YTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKME 457
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
E D +T+ ++ + + + +A KLL E+ K+L+
Sbjct: 458 ENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497
>gi|296089012|emb|CBI38715.3| unnamed protein product [Vitis vinifera]
Length = 429
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 14/273 (5%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q DPL+ E+F+ AS QP F+H S++HI+ KLG A+ + M D++ + L + +
Sbjct: 69 QSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMR-LKSEQYSINP 127
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+L++ II + EA +A+ F M +P + N L +S
Sbjct: 128 SLFSDIIEIYGEANLPDQALKTFHSM---LQFHSKPLPKHLNRLLQLLVSHRN------- 177
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
Y+ LFK G+ PD S N ++ + + ++ A +F+QM + P+ SY
Sbjct: 178 YIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQM-FKRDVAPDVESY 236
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
L+ GLC + + A +L ++M KG+VP + SY + L G +E + EM+
Sbjct: 237 RILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTF--GLCDQGLYDEAKNYVEEMLS 294
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
K + F + +++ C G+ EA ++L+E+
Sbjct: 295 KGFSLHFSVFHALINGFCNVGKLEEACEVLREM 327
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA-QGRTK 307
I P +FS +I+ Y +N + AL+ FH M + ++ P + L+ L + + +
Sbjct: 124 SINPSLFS--DIIEIYGEANLPDQALKTFHSM-LQFHSKPLPKHLNRLLQLLVSHRNYIR 180
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A +L R G P +KSYN L+SA NG++ +M ++ D +YR ++
Sbjct: 181 PAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILM 240
Query: 368 DEICRRGRAGEAMKLLKELQNKNLI-DGYTYT 398
+CR+ + A+ LL+++ NK + D +YT
Sbjct: 241 QGLCRKSQVNRAVDLLEDMLNKGYVPDALSYT 272
>gi|125539402|gb|EAY85797.1| hypothetical protein OsI_07159 [Oryza sativa Indica Group]
Length = 506
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 123/242 (50%), Gaps = 14/242 (5%)
Query: 151 KMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
++ ++ D ++ L P+ C +YN +I ++ + L A VF M+N + RPS
Sbjct: 174 ELLADLRDPRSKYLPQPNTC----IYNILIKYYVKKGDLGTAFQVFDEMRNMNCADVRPS 229
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN-DGIEPDIFSLNSMIKGYILSNH 269
+ +Y+ L L RG M+ LF+ M+ D I PD + N +I G+
Sbjct: 230 LVTYSTLIGG-LCRGAQ-------MKEAFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQ 281
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
V A IF M PN+F+Y LI+G C +G + AR + +EM R G P + SY
Sbjct: 282 VEKAQSIFGFMRK-NECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDAVSYT 340
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
SLV L +G V+E + + EM +K D +TY +L+ +C+ R EA+ LL++L ++
Sbjct: 341 SLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSE 400
Query: 390 NL 391
+
Sbjct: 401 GV 402
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 115/270 (42%), Gaps = 13/270 (4%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R TY + L +E ++ M+ + YN +I F ++ +A
Sbjct: 227 RPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQ 286
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F +M+ + EC P+ +Y L +G+ +E R +F++M+ G++PD
Sbjct: 287 SIFGFMRKN---ECEPNAFNYATLINGHCKKGE--------VEAARGVFEEMIRSGVQPD 335
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
S S++ +V++ + + +M + +Y+ L+ GLC R A L
Sbjct: 336 AVSYTSLVGCLCRHGNVDEGINLVQEMWQ-KGCKADVVTYNLLLEGLCKDRRIAEAVTLL 394
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+++ +G + SY +++ L GE+E+ L M+ + + +L +C
Sbjct: 395 EKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDV 454
Query: 374 GRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
GR +A L L + + + + +L++
Sbjct: 455 GRVSDATVTLYGLVDTGFMPEARCWARLIE 484
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 149/316 (47%), Gaps = 14/316 (4%)
Query: 89 TQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLG 148
T+ + ++ L P F++ + NV+ P L+ F W + +HD T+ + + LG
Sbjct: 100 TRLQNSIRALVPEFDHSLVYNVLHGARKPDHALQFFRWVERAGLIQHDRETHMKIIQILG 159
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
M +V + + F E ++ +I + +A + +V +F MK L
Sbjct: 160 RYSMLNHARCIVLEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKE---LGVE 216
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
S++SYN LF + +G+ YM R F +M+++GI P + N +I G+ LS
Sbjct: 217 RSVKSYNALFKVIVRKGR-------YMMAKR-FFNKMLDEGIGPTRHTYNVLIWGFFLSM 268
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A+R + M V P+ +Y+ +I+G R + A +L EMK K P+ SY
Sbjct: 269 RLRTAVRFYEDMKV-RGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISY 327
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+++ + + ++ L EM + +TY T+L ++C G+ EA +LKE+
Sbjct: 328 TTMIKGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDILKEMVR 387
Query: 389 KNLI--DGYTYTKLLD 402
+ + D + KLL+
Sbjct: 388 RRIAPKDNSIFLKLLN 403
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 22/231 (9%)
Query: 158 DVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSRAV-YVFKYMKNSRNLECRPSIR-- 212
DV++ M L+ PS G Y +I F +A + +AV +V K ++N L + ++
Sbjct: 416 DVLDGMIKLSIPSEAGH---YGVLIENFCKAEEYDQAVKFVDKLIENDIILRPQSTLEME 472
Query: 213 --SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+YN + S G+ LF+Q++ G+E D + N++I G+
Sbjct: 473 SGAYNPVIQYLCSHGQTG--------KAEILFRQLLKKGVE-DPLAFNNLICGHAKEGTP 523
Query: 271 NDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ A I MG +P ++ +Y LI +G +A+ D M G +P S +
Sbjct: 524 DSAFEILKIMG--RKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFR 581
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
S++ +L +G V+ + + M+EK + +L+ + RG EA+
Sbjct: 582 SVMESLYEDGRVQTASRVMKSMVEKGVKENMDLVAKILEALLMRGHEEEAL 632
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 157/319 (49%), Gaps = 35/319 (10%)
Query: 100 PRF-NNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDD 158
P+F ++E N++ + DP LE+FN +Q F H+ +TY + KL AK +Q +D
Sbjct: 45 PKFISHETAVNLIKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDA 104
Query: 159 VVNQML-ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QM+ T F E+L+ ++ +FA++ + R V +F K + +PS+++ +
Sbjct: 105 LLRQMMYETCKF--HESLFLNLMKYFAKSSEFERVVEMFN--KIQPIVREKPSLKAISTC 160
Query: 218 FTAF-------LSRG------------KNTYINHVY---------METIRCLFKQMVNDG 249
L RG NT I +++ +E+ + K+M
Sbjct: 161 LNLLVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSS 220
Query: 250 IE-PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
I P++ + ++++ G S + +A+ +F +M LP++ +Y+ LI+G G+
Sbjct: 221 ISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDR 280
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A+++ + MK G P+ +Y++L+S G +EE + EM D + Y +++
Sbjct: 281 AKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILIN 340
Query: 369 EICRRGRAGEAMKLLKELQ 387
CR GR EAM LL+E++
Sbjct: 341 YFCRFGRIDEAMALLEEMK 359
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 117/275 (42%), Gaps = 31/275 (11%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + L + +E ++ +M++ YN +I F+ K+ RA + ++
Sbjct: 228 TYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEF 287
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGK---------------------------NTYIN 231
MK++ C P++ +Y+ L + F G+ N +
Sbjct: 288 MKSNG---CSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCR 344
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
++ L ++M + DI ++N +++G+ +AL + +++ YL N
Sbjct: 345 FGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYL-NKA 403
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
SY +++ LC +G A EL +GFVP + N L+ L G ++ V L+ +
Sbjct: 404 SYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGL 463
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
E + ++ +++ +CR + A +LL EL
Sbjct: 464 AEMGFKPEQDSWALLVEFVCRERKLLLAFELLDEL 498
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 46/339 (13%)
Query: 98 LPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD 157
+ P + + V+ Q+DP+ LE+FN K+ F+H STY + KLG ++ M+
Sbjct: 1 MGPPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAME 60
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
+V+ M E +Y + + K+ AV VF+ M +C P++ SYN +
Sbjct: 61 EVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDF---YDCEPTVFSYNAI 117
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+ + G + VYM +M + GI PD++S +K + ++ + ALR+
Sbjct: 118 MSVLVDSGYFDQAHKVYM--------RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169
Query: 278 HQMG-------------VVYNYLPNSF---------------------SYDYLIHGLCAQ 303
+ M VV + +F +++ L+ LC +
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G K +L D++ ++G +P+ +YN + L GE++ V+ + +IE+ D ITY
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++ +C+ + EA L ++ N+ L D YTY L+
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 14/268 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D+ TY+ + M Q + +V + F + Y ++I + +RA+ +
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFN-GFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F + +P++ YN L ++G + +E + L +M G+ P++
Sbjct: 379 FN---EALGKGIKPNVILYNTLIKGLSNQG-------MILEAAQ-LANEMSEKGLIPEVQ 427
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N ++ G V+DA + M + Y P+ F+++ LIHG Q + +NA E+ D
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVM-ISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G P +YNSL++ L + E+ ++ M+EK + T+ +L+ +CR +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLD 402
EA+ LL+E++NK++ D T+ L+D
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLID 574
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LYNT+I + + A + M + P ++++NIL G
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLI---PEVQTFNILVNGLCKMG--------C 441
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
+ L K M++ G PDIF+ N +I GY + +AL I M GV P+ +
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD----PDVY 497
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ L++GLC + ++ E M KG P+ ++N L+ +L +++E + L EM
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
K D +T+ T++D C+ G A L ++++
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +YN+ RG+ V M + CL +Q G +PD+ + N++I G ++
Sbjct: 249 PNLFTYNLFIQGLCQRGELD--GAVRM--VGCLIEQ----GPKPDVITYNNLIYGLCKNS 300
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+A +M V P+S++Y+ LI G C G + A + + GFVP +Y
Sbjct: 301 KFQEAEVYLGKM-VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
SL+ L GE + E + K + I Y T++ + +G EA +L E+
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 389 KNLI 392
K LI
Sbjct: 420 KGLI 423
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +++ G+ P++F+ N I+G ++ A+R+ + + P+ +Y+ LI+GL
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL-IEQGPKPDVITYNNLIYGL 296
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C + + A +M +G P S +YN+L++ G V+ + + + + D
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
TYR+++D +C G A+ L E K +
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 104/266 (39%), Gaps = 50/266 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ + K + +K M C P++ ++NIL + K +
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKG---CAPNLFTFNILLESLCRYRK--------L 547
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---------GVVYNY 286
+ L ++M N + PD + ++I G+ + ++ A +F +M YN
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNI 607
Query: 287 L--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+ P+ ++Y ++ G C G + EM G
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
F+PS + +++ L + V E + M++K + + T+ D + ++ A +
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN--TICD-VDKKEVAAPKL 724
Query: 381 KLLKELQNKNLIDGYTYTKLLDVLED 406
+L++L K+ I Y Y L D L D
Sbjct: 725 -VLEDLLKKSCITYYAYELLFDGLRD 749
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 178/368 (48%), Gaps = 28/368 (7%)
Query: 47 PHLKLSS-NAILCSCYS-------AIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSEL 98
P L ++ +LCS S A+AL S+S G + + P + +
Sbjct: 2 PSLSVTGRTTMLCSTQSRHRPKTTAVALLHSNSTG------SPNNPLPESYTVTPPIKPW 55
Query: 99 PPRFNNEELCNVMTLQEDPLVCLELFNWASK-QPRFRHDASTYHIMTRKLGAAKMYQEMD 157
P R + L +++T Q++ + L++F +A K QP F H+ TY + KL A+++ ++
Sbjct: 56 PQRLYPKRLVSMITRQQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVE 115
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
+++ + + CG E ++ +I + A K A+ F +++ + S+RS N L
Sbjct: 116 LLLSDLHKSQIKCG-ENIFINVIRNYGLAGKPDFALRTFIRIQD---FNVQRSVRSLNTL 171
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
AF+ + K + H + R + G+ P++F+ N +IK N V A+++
Sbjct: 172 LNAFV-QNKRYDLVHAMFKNCRSKY------GVLPNVFTCNILIKALCKKNDVESAVKVL 224
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+M + +PN +Y ++ G ++G NA ++ E+ +G++P + +Y L++
Sbjct: 225 DEMPAM-GMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCE 283
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTY 397
G + + +K + +M E + +TY +++ C+ +AGEA LL ++ + +
Sbjct: 284 QGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSAL 343
Query: 398 -TKLLDVL 404
K++DVL
Sbjct: 344 CCKVIDVL 351
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L+K+M+ PD ++++I V +A ++F + +P+ +Y+ LI G+
Sbjct: 363 LWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFE--RGAIPSLLTYNTLIAGM 420
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A +L D+M KG+ P++ +YN L+ + G +E ++ L EM++ + +
Sbjct: 421 CEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNK 480
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLD 402
TY +++E+C+ G GE K++ +D ++ L+
Sbjct: 481 STYAILIEELCKMGMEGEVDKVVSMAMASGGVDSDSWDLFLN 522
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 165/387 (42%), Gaps = 74/387 (19%)
Query: 77 RSKADSKPALDDTQFR---CAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRF 133
+ KA + LD QFR + + +++ + +++ Q L+ F WAS P+F
Sbjct: 9 KLKATASKLLDIFQFRRYSSSSTPSLSVPSHQHIAHLILDQNSATKALQTFKWASNLPKF 68
Query: 134 RHDASTYHIMTRKLGA----AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL 189
H STY + +KL A +YQ +D++ + + + P E ++ T+I AR +
Sbjct: 69 THSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPD----EEIFLTVIRGLGRARMI 124
Query: 190 SRAVYVFKYM-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF-KQMVN 247
+ V + K +N PS++ +N + + V ++ R + KQM+
Sbjct: 125 PHVIKVLDLISKFGKN----PSLKIFNSILDVLVK---------VDIDVAREFYRKQMMG 171
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQG 304
G++ D ++ ++KG L+N + D R+ M GV PN+ Y+ L+H LC G
Sbjct: 172 SGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVK----PNAVVYNTLLHALCKNG 227
Query: 305 RTKNARELCDEMKRK-------------------------------GFVPSSKSYNSLVS 333
+ AR L DE++ GFVP + +V
Sbjct: 228 KVGRARSLMDEIEEPNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVE 287
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN--- 390
L G V E V+ L + K VD + Y T+L CR G+ A + LKE++ K
Sbjct: 288 ILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLP 347
Query: 391 -------LIDGYTYTKLLDVLEDDFGN 410
LI G+ + + D+ D F +
Sbjct: 348 NVETYNILISGFCDSGMFDMALDMFND 374
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 115/267 (43%), Gaps = 14/267 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+ TY+I+ + M+ D+ N M T Y+T+I ++ + +
Sbjct: 348 NVETYNILISGFCDSGMFDMALDMFNDM-KTDGISWNFDTYDTLIKGLFFGGRIEEGLKI 406
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M+ S+ I YN + Y +++ E + L K + + P
Sbjct: 407 LELMEESKG-GSGGRISPYNSVLYGL-------YKKNMWDEALEFLMKM---EKLFPRAV 455
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ I G+ V +A +F QM + PN YD L+HG C +G + A EL +E
Sbjct: 456 DRSLRILGFCEKGAVKNAKMVFDQM-INEGGTPNILVYDCLVHGFCQEGNLREAFELMNE 514
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G+ + +N+L+ G+ E +K L +M+ + D TY ++D +CR+G
Sbjct: 515 MVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGN 574
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
+A+ + ++ K + D T+ LL
Sbjct: 575 FQKALSIFNQMIEKGITPDSSTWNSLL 601
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE-ALYN 177
+ L++FN K + TY + + L +E ++ M + G + YN
Sbjct: 367 MALDMFN-DMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYN 425
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
+++Y + A+ +++ L R RS IL F +G ++
Sbjct: 426 SVLYGLYKKNMWDEAL---EFLMKMEKLFPRAVDRSLRIL--GFCEKGA--------VKN 472
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ +F QM+N+G P+I + ++ G+ ++ +A + ++M V + Y + ++ LI
Sbjct: 473 AKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEM-VGHGYFLVASGFNALI 531
Query: 298 HGLCAQGRTKNARELCDEMK-----------------------------------RKGFV 322
HG C QG+ ++A +L D+M KG
Sbjct: 532 HGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGIT 591
Query: 323 PSSKSYNSLVSALA 336
P S ++NSL+ L+
Sbjct: 592 PDSSTWNSLLIRLS 605
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 101/218 (46%), Gaps = 16/218 (7%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+ +N +I + + L +A+ + ++ S +L P + + + + G+ T
Sbjct: 244 DVTFNVLIAAYCKEENLVQALVL---LEKSFSLGFVPDVVTMTKVVEILCNAGRVT---- 296
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
E + L + G+ D+ + N++++G+ + A R +M LPN +
Sbjct: 297 ---EAVEMLERVEYKGGL-VDVVAYNTLLRGFCRLGKIKVAHRFLKEMER-KGCLPNVET 351
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI G C G A ++ ++MK G + +Y++L+ L G +EE +K L E++
Sbjct: 352 YNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKIL-ELM 410
Query: 353 EKQRPVD---FITYRTVLDEICRRGRAGEAMKLLKELQ 387
E+ + Y +VL + ++ EA++ L +++
Sbjct: 411 EESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKME 448
>gi|359489475|ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
vinifera]
Length = 1105
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 135/273 (49%), Gaps = 16/273 (5%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q DPL+ E+F+ AS QP F+H S++HI+ KLG A+ + M D++ + L + +
Sbjct: 55 QSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMR-LKSEQYSINP 113
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+L++ II + EA +A+ F M +P + N L +S YI
Sbjct: 114 SLFSDIIEIYGEANLPDQALKTFHSM---LQFHSKPLPKHLNRLLQLLVSH--RNYIRPA 168
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ LFK G+ PD S N ++ + + ++ A +F+QM + P+ SY
Sbjct: 169 F-----DLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQM-FKRDVAPDVESY 222
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
L+ GLC + + A +L ++M KG+VP + +LVS L G +E + EM+
Sbjct: 223 RILMQGLCRKSQVNRAVDLLEDMLNKGYVPDA----TLVSGLCDQGLYDEAKNYVEEMLS 278
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
K + F + +++ C G+ EA ++L+E+
Sbjct: 279 KGFSLHFSVFHALINGFCNVGKLEEACEVLREM 311
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA-QGRTKN 308
I P +FS +I+ Y +N + AL+ FH M + ++ P + L+ L + + +
Sbjct: 111 INPSLFS--DIIEIYGEANLPDQALKTFHSM-LQFHSKPLPKHLNRLLQLLVSHRNYIRP 167
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L R G P +KSYN L+SA NG++ +M ++ D +YR ++
Sbjct: 168 AFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQ 227
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGYT 396
+CR+ + A+ LL+++ NK + T
Sbjct: 228 GLCRKSQVNRAVDLLEDMLNKGYVPDAT 255
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 129/259 (49%), Gaps = 15/259 (5%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R D Y+ + + K+ + D ++M+A C T YNT+I +L A+
Sbjct: 206 RLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVA-KRICPTVVTYNTLICGLCIMGQLKDAI 264
Query: 194 YVFKYMKNSRNLE-CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ M LE P++ +++IL AF GK ++ + +F M+ ++P
Sbjct: 265 GLLHKMI----LENINPTVYTFSILVDAFCKEGK--------VKEAKNVFVVMMKKDVKP 312
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+I + NS++ GY L N VN A IF+ M + P+ SY +I G C A +L
Sbjct: 313 NIVTYNSLMNGYCLVNEVNKAESIFNTMAQI-GVAPDVHSYSIMISGFCKIKMVDEAMKL 371
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+EM K P +YNSL+ L +G + +K + EM ++ +P + ITY ++LD +C+
Sbjct: 372 FEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCK 431
Query: 373 RGRAGEAMKLLKELQNKNL 391
+A++LL +L++ N+
Sbjct: 432 NHHVDKAIELLTKLKDHNI 450
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +QM +GI ++ +L+ +I + H + + +F + + Y P++ + LI GL
Sbjct: 91 LHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNI-LKKGYEPDAITLTTLIKGL 149
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A D++ GF + SY +L++ L G+ + ++ L + K +D
Sbjct: 150 CLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDV 209
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ Y T++D +C+ +A E+ K +
Sbjct: 210 VMYNTIIDGVCKDKLVNDAFDFYSEMVAKRI 240
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 86/179 (48%), Gaps = 21/179 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR---PSIRSYNILFTAFLSRGKNTYINH 232
Y+ +I F + + + A+ +F+ M C+ P + +YN L G+ +Y
Sbjct: 352 YSIMISGFCKIKMVDEAMKLFEEM------HCKQIFPDVVTYNSLIDGLCKSGRISYALK 405
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
L +M + G P+I + NS++ ++HV+ A+ + ++ +N P+ +
Sbjct: 406 --------LIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKD-HNIQPSVCT 456
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
Y+ LI+GLC GR K+A+++ +++ G+ +YN+++ G V + W +
Sbjct: 457 YNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV---IPQFWTV 512
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 109/218 (50%), Gaps = 12/218 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+Y T+I F + R RA F Y +SR++ P + +Y + + F G
Sbjct: 352 VVYTTLIDGFCK-RGDIRAASKFFYEMHSRDIT--PDVLTYTAIISGFCQIGD------- 401
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
M LF +M G+EPD + +I GY + H+ DA R+ + M + PN +Y
Sbjct: 402 -MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTY 459
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI GLC +G +A EL EM + G P+ +YNS+V+ L +G +EE VK + E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D +TY T++D C+ G +A ++LKE+ K L
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 29/258 (11%)
Query: 149 AAKMYQEMDDVVNQMLATPSFC-GTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
A K++ EM FC G E + +I + +A + A V +M +
Sbjct: 405 AGKLFHEM------------FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-- 450
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
C P++ +Y L G +++ L +M G++P+IF+ NS++ G
Sbjct: 451 -GCSPNVVTYTTLIDGLCKEGD--------LDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
S ++ +A+++ + ++ +Y L+ C G A+E+ EM KG P+
Sbjct: 502 CKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
++N L++ L+G +E+ K L M+ K + T+ +++ + C R A + K
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 385 ELQNKNL-IDGYTYTKLL 401
++ ++ + DG TY L+
Sbjct: 621 DMCSRGVGPDGKTYENLV 638
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 10/194 (5%)
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
++ SYNI+ G+ +H+ + M G PD+ S ++++ GY
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLL--------LMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
++ ++ M PNS+ Y +I LC + A E EM R+G +P + Y
Sbjct: 297 LDKVWKLIEVMKR-KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+L+ G++ K +EM + D +TY ++ C+ G EA KL E+ K
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 390 NL-IDGYTYTKLLD 402
L D T+T+L++
Sbjct: 416 GLEPDSVTFTELIN 429
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 162/395 (41%), Gaps = 54/395 (13%)
Query: 51 LSSNAILCSCYSAIALSRSSSRGVGKRSKADSKPALD---------DTQFRCAVS----- 96
L L S + I L SRG+ + D++P D DT+F ++
Sbjct: 9 LMKRGTLSSFRNFIQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKL 68
Query: 97 --------ELPP---RFNNEELCNV-MTLQEDPLVCLELFNWASKQPRFRHDAS--TYHI 142
L P +F + L V M ++ D + L+ F+WA R R D++ + I
Sbjct: 69 RRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWA----RSRRDSNLESLCI 124
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL---YNTIIYFFAEARKLSRAVYVFKYM 199
+ A+K + +++ P T++ ++ ++Y + + R VF +
Sbjct: 125 VIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQV 184
Query: 200 KNSRNLECRPSIRSYNILFTAFLSRGK-------NTYINHVYME-----TIRCLFKQMVN 247
L +R +F L+ G N Y+ + + T +F++
Sbjct: 185 LVDFGL-----LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE 239
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G+ ++ S N +I + +A + M + Y P+ SY +++G C G
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL-KGYTPDVISYSTVVNGYCRFGELD 298
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+L + MKRKG P+S Y S++ L ++ E + EMI + D + Y T++
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 368 DEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D C+RG A K E+ ++++ D TYT ++
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 23/255 (9%)
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
C A YN +I+F + ++ A ++ M+ P + SY+ + + G+
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY---TPDVISYSTVVNGYCRFGE--- 296
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
++ + L + M G++P+ + S+I + +A F +M + LP+
Sbjct: 297 -----LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPD 350
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ Y LI G C +G + A + EM + P +Y +++S G++ E K
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMK----LLKELQNKNLIDGYTYTKLLDVL- 404
EM K D +T+ +++ C+ G +A + +++ + N++ TYT L+D L
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV---TYTTLIDGLC 467
Query: 405 ---EDDFGNSIRHHL 416
+ D N + H +
Sbjct: 468 KEGDLDSANELLHEM 482
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 93/216 (43%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+I+ ++ + AV K + +Y L A+ G+ M
Sbjct: 494 YNSIVNGLCKSGNIEEAV---KLVGEFEAAGLNADTVTYTTLMDAYCKSGE--------M 542
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + K+M+ G++P I + N ++ G+ L + D ++ + M + PN+ +++
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM-LAKGIAPNATTFNS 601
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ C + K A + +M +G P K+Y +LV ++E EM K
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
V TY ++ +R + EA ++ +++ + L
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 156/340 (45%), Gaps = 23/340 (6%)
Query: 66 LSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFN 125
L R R +G RS + K + Q R + L P ++C V+ Q+D V L+ F
Sbjct: 143 LVREVGRLIGLRSSWNPK---HEGQMRNLLRSLKP----SQVCAVLRSQDDERVALKFFY 195
Query: 126 WASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
WA +Q R+RHD Y+ M L K+ Q V+ M + EA ++ ++ ++
Sbjct: 196 WADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEA-FSRVMVSYSR 254
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
A +L A+ V M+ + P++ N F+ + +E ++M
Sbjct: 255 AGQLRDALKVLTLMQRA---GVEPNLLICNTTIDVFVRANR--------LEKALRFLERM 303
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
GI P++ + N MI+GY + V +A+ + M LP+ SY ++ LC + R
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS-KGCLPDKVSYYTIMGYLCKEKR 362
Query: 306 TKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R+L +M K G VP +YN+L+ L + +E + L + EK +D + Y
Sbjct: 363 IVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYS 422
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLD 402
++ +C+ GR EA L+ E+ +K D TYT +++
Sbjct: 423 AIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVN 462
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 118/268 (44%), Gaps = 20/268 (7%)
Query: 128 SKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEAR 187
+++ FR D Y + L E D++N+ML+ Y ++ F
Sbjct: 409 AQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 468
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
++ +A + + M + +P+ SY L GK+ +E ++M+N
Sbjct: 469 EVDKAKKLLQVMHTHGH---KPNTVSYTALLNGMCRTGKS-------LEA-----REMMN 513
Query: 248 DGIE----PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
E P+ + + ++ G +++A + +M V+ + P + L+ LC
Sbjct: 514 MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREM-VLKGFFPGPVEINLLLQSLCRD 572
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
GRT AR+ +E KG + ++ +++ N E++ + L +M + D TY
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL 391
T++D + ++GR EA +L+K++ +K +
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGI 660
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 15/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ I++ KLS A V + M P N+L + L R T+ +M
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFF---PGPVEINLLLQS-LCRDGRTHEARKFM 582
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E CL N G ++ + ++I G+ ++ ++ AL + M ++ N + F+Y
Sbjct: 583 E--ECL-----NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLI-NKHADVFTYTT 634
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ L +GR A EL +M KG P+ +Y +++ G+V++ V L +MI +Q
Sbjct: 635 LVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ 694
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL-KELQNKNLIDGYTYTKLLD 402
+ Y V++++C G+ EA LL K L+ + D T L++
Sbjct: 695 KCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALME 740
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 117/233 (50%), Gaps = 12/233 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y TII + K A+ +F MK R P++ YN + +G
Sbjct: 175 EVCYGTIINGLCKIGKTRDAIQMFPKMKKIR---VYPNLIMYNTVIDGLCKQG------- 224
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
++ L +MV +GIE D++S NSMI G+ A+++ +M V P+ ++
Sbjct: 225 -LVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYT 283
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
++ LI GLC GR A + M ++G+ P SYN+L++ L+G V E + +M+
Sbjct: 284 FNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMV 343
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
E+ + I+Y T+++ C+ EAM LL E+ NKNL+ D TY LLD L
Sbjct: 344 ERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGL 396
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 102/254 (40%), Gaps = 54/254 (21%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I+ F + AV + M + P + ++NIL G+ + +V
Sbjct: 248 YNSMIHGFCSVGRFQAAVKLLDEMVVRG--KVYPDVYTFNILIDGLCKLGRVSEAYNV-- 303
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
M+ G +PDI S N+++ GY LS V +A ++F +M V LPN SY
Sbjct: 304 ------VAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM-VERTALPNVISYCT 356
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C A L EM K VP + +YN L+ L+ +G W+++E
Sbjct: 357 LINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYE----WDLVEAM 412
Query: 356 R----PVDFITYRTVL-----------------------------------DEICRRGRA 376
R P D ITY +L D +C+ GR
Sbjct: 413 RASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRL 472
Query: 377 GEAMKLLKELQNKN 390
A ++ + L K
Sbjct: 473 KYAKEIFQLLSAKG 486
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 141 HIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMK 200
+ ++ +G AK Q D +V + A P+ Y T+I + + R + A+ + M
Sbjct: 326 YCLSGSVGEAK--QVFDKMVERT-ALPNVIS----YCTLINGYCKVRMVDEAMVLLTEMH 378
Query: 201 NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM 260
N +NL P +YN L G++ Y L + M G D+ + N +
Sbjct: 379 N-KNLV--PDTVTYNCLLDGLSKSGRSLYEWD--------LVEAMRASGQPADLITYNVL 427
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+ Y + AL +F + + PN +Y+ L+ GLC GR K A+E+ + KG
Sbjct: 428 LDDYFKHEKFDKALALFQHI-IEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKG 486
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
P+ ++YN ++ L G ++E L++M+ ++IT+ T++ I
Sbjct: 487 CQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 55/200 (27%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+PS+ +++IL AF G+ M L ++ G + D+ L +++KG L
Sbjct: 102 KPSLITFSILINAFAQLGQ--------MGFAFSLLGNILKMGFQIDVRILTTLMKGLCLK 153
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYD-----YLIHGLCAQGRTKNARELCDEMKRKGFV 322
V +A+ + H+ Y+ F +D +I+GLC G+T++A ++ +MK+
Sbjct: 154 GRVLEAVSLLHE------YVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVY 207
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P + I Y TV+D +C++G EA L
Sbjct: 208 P-----------------------------------NLIMYNTVIDGLCKQGLVDEACGL 232
Query: 383 LKEL-QNKNLIDGYTYTKLL 401
E+ +N +D Y+Y ++
Sbjct: 233 CTEMVENGIELDVYSYNSMI 252
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 109/218 (50%), Gaps = 12/218 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+Y T+I F + R RA F Y +SR++ P + +Y + + F G
Sbjct: 795 VVYTTLIDGFCK-RGDIRAASKFFYEMHSRDIT--PDVLTYTAIISGFCQIGD------- 844
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
M LF +M G+EPD + +I GY + H+ DA R+ + M + PN +Y
Sbjct: 845 -MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTY 902
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI GLC +G +A EL EM + G P+ +YNS+V+ L +G +EE VK + E
Sbjct: 903 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D +TY T++D C+ G +A ++LKE+ K L
Sbjct: 963 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 1000
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 29/258 (11%)
Query: 149 AAKMYQEMDDVVNQMLATPSFC-GTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
A K++ EM FC G E + +I + +A + A V +M +
Sbjct: 848 AGKLFHEM------------FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG- 894
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
C P++ +Y L G +++ L +M G++P+IF+ NS++ G
Sbjct: 895 --CSPNVVTYTTLIDGLCKEGD--------LDSANELLHEMWKIGLQPNIFTYNSIVNGL 944
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
S ++ +A+++ + ++ +Y L+ C G A+E+ EM KG P+
Sbjct: 945 CKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 1003
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
++N L++ L+G +E+ K L M+ K + T+ +++ + C R A + K
Sbjct: 1004 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 1063
Query: 385 ELQNKNL-IDGYTYTKLL 401
++ ++ + DG TY L+
Sbjct: 1064 DMCSRGVGPDGKTYENLV 1081
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ SYNI+ G+ +H+ + M G PD+ S ++++ GY +
Sbjct: 689 VASYNIVIHFVCQLGRIKEAHHLLL--------LMELKGYTPDVISYSTVVNGYCRFGEL 740
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ ++ M PNS+ Y +I LC + A E EM R+G +P + Y +
Sbjct: 741 DKVWKLIEVMKR-KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 799
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ G++ K +EM + D +TY ++ C+ G EA KL E+ K
Sbjct: 800 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859
Query: 391 L-IDGYTYTKLLD 402
L D T+T+L++
Sbjct: 860 LEPDSVTFTELIN 872
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 157/378 (41%), Gaps = 54/378 (14%)
Query: 68 RSSSRGVGKRSKADSKPALD---------DTQFRCAVS-------------ELPP---RF 102
+ SRG+ + D++P D DT+F ++ L P +F
Sbjct: 469 KQKSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKF 528
Query: 103 NNEELCNV-MTLQEDPLVCLELFNWASKQPRFRHDAS--TYHIMTRKLGAAKMYQEMDDV 159
+ L V M ++ D + L+ F+WA R R D++ + I+ A+K + +
Sbjct: 529 KTDHLIWVLMKIKCDYRLVLDFFDWA----RSRRDSNLESLCIVIHLAVASKDLKVAQSL 584
Query: 160 VNQMLATPSFCGTEAL---YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
++ P T++ ++ ++Y + + R VF + L +R
Sbjct: 585 ISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGL-----LREARR 639
Query: 217 LFTAFLSRGK-------NTYINHVYME-----TIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+F L+ G N Y+ + + T +F++ G+ ++ S N +I
Sbjct: 640 VFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFV 699
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ +A + M + Y P+ SY +++G C G +L + MKRKG P+
Sbjct: 700 CQLGRIKEAHHLLLLMEL-KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 758
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
S Y S++ L ++ E + EMI + D + Y T++D C+RG A K
Sbjct: 759 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 818
Query: 385 ELQNKNLI-DGYTYTKLL 401
E+ ++++ D TYT ++
Sbjct: 819 EMHSRDITPDVLTYTAII 836
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 23/255 (9%)
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
C A YN +I+F + ++ A ++ M+ P + SY+ + + G+
Sbjct: 686 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY---TPDVISYSTVVNGYCRFGE--- 739
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
++ + L + M G++P+ + S+I + +A F +M + LP+
Sbjct: 740 -----LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPD 793
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ Y LI G C +G + A + EM + P +Y +++S G++ E K
Sbjct: 794 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 853
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMK----LLKELQNKNLIDGYTYTKLLDVL- 404
EM K D +T+ +++ C+ G +A + +++ + N++ TYT L+D L
Sbjct: 854 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV---TYTTLIDGLC 910
Query: 405 ---EDDFGNSIRHHL 416
+ D N + H +
Sbjct: 911 KEGDLDSANELLHEM 925
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 93/216 (43%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+I+ ++ + AV K + +Y L A+ G+ M
Sbjct: 937 YNSIVNGLCKSGNIEEAV---KLVGEFEAAGLNADTVTYTTLMDAYCKSGE--------M 985
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + K+M+ G++P I + N ++ G+ L + D ++ + M + PN+ +++
Sbjct: 986 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM-LAKGIAPNATTFNS 1044
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ C + K A + +M +G P K+Y +LV ++E EM K
Sbjct: 1045 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 1104
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
V TY ++ +R + EA ++ +++ + L
Sbjct: 1105 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 157/337 (46%), Gaps = 53/337 (15%)
Query: 116 DPLVCLELFNWASKQPRFRHDAST------YHIMTRKLGAAKMY--QEMDDVVNQMLATP 167
DP E+F WA KQ +F H+ T ++ R++ A ++ M +V
Sbjct: 81 DPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNV-------- 132
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
F E YNT++ F +A + +A+ +F MK+S +RS+NI+ S GK
Sbjct: 133 -FEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGI----AVLRSHNIVLRGLCSGGKI 187
Query: 228 TYINHVY--------------------------METIRCLFKQMVNDGIEPDIFSLNSMI 261
+ V+ ++ LFKQMV+ I PD+ + ++I
Sbjct: 188 SMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALI 247
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
G V +A +F + + P +Y+ +I GLC GR +NA L D+M R+
Sbjct: 248 DGLGKQRRVKEAYDLFEEARAKGCH-PTVVTYNTMIDGLCKCGRIENALTLYDDMVREPH 306
Query: 322 V-PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
+ P +Y++L++ L L+ E+ + EM++ D +TY T+LD +C+ G +AM
Sbjct: 307 LKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAM 366
Query: 381 KLLKELQNKNLIDG--YTYTKLLDVL--EDDFGNSIR 413
++ +++ N+ D TYT L+D D G++++
Sbjct: 367 EIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVK 403
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 114/249 (45%), Gaps = 16/249 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + LG + +E D+ + A T YNT+I + ++ A+ +
Sbjct: 239 DVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCH-PTVVTYNTMIDGLCKCGRIENALTL 297
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAF--LSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ M +L +P + +Y+ L +RG+ Y L+++M++ G PD
Sbjct: 298 YDDMVREPHL--KPDMFTYSALINGLNLSNRGEKAYE----------LYEEMLDTGCSPD 345
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + N+++ G S + A+ IF +MGV PN +Y LI C R +A +L
Sbjct: 346 VVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLA 405
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
EM+ + +P + ++ +++ L ++E L+E I K D + + T+L C+
Sbjct: 406 KEMEGRSLLPDAVTFTTVIQKLCKESRIDEA-HELFESIGKTCKPDSVLFNTMLAGYCKI 464
Query: 374 GRAGEAMKL 382
R +A KL
Sbjct: 465 TRIDDAKKL 473
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 107/238 (44%), Gaps = 15/238 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTI 179
L L++ ++P + D TY + L + ++ ++ +ML T C + + YNT+
Sbjct: 295 LTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTG--CSPDVVTYNTL 352
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ ++ +A+ +F+ M C P++ +Y +L F + + ++
Sbjct: 353 LDGLCKSGCEDKAMEIFRKMGVGN--VCDPNVITYTVLIDRFCKVDR-------LGDAVK 403
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
L K+M + PD + ++I+ + +++A +F +G P+S ++ ++ G
Sbjct: 404 -LAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCK--PDSVLFNTMLAG 460
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
C R +A++L D M G P+ +Y +LV+ G + + EMIE P
Sbjct: 461 YCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFP 518
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 118/230 (51%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+IY F KL A+ + M P +R+Y IL A GK +
Sbjct: 485 YSTLIYGFCIVGKLKEAIGLLNEMVLK---TINPDVRTYTILVDALGKEGK--------V 533
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + M+ ++PD+F+ N+++ GY+L V A +F+ M ++ P+ +Y
Sbjct: 534 KEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLM-GVTPDVHTYTI 592
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C A L EM +K VP + +Y+SLV L +G + + EM ++
Sbjct: 593 LINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRG 652
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+P D ITY +++D +C+ G +A+ L +++++ + + +T+T LLD L
Sbjct: 653 QPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGL 702
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 19/233 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR---PSIRSYNILFTAFLSRGKNTYINH 232
+N I+ FA+ + S AV + S LE + P + + NIL F G+ T+
Sbjct: 310 FNKILDSFAKMKHYSTAVSL------SHRLELKGIQPDLFTLNILINCFCHMGQITFGFS 363
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
V +++ G P +LN++IKG L V AL FH + + N S
Sbjct: 364 V--------LAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALH-FHDKLLAQGFQLNQVS 414
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+G+C G T+ A +L ++ + P+ + Y++++ AL V E EM
Sbjct: 415 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMT 474
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
K D +TY T++ C G+ EA+ LL E+ K + D TYT L+D L
Sbjct: 475 VKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDAL 527
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 112/220 (50%), Gaps = 18/220 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I F +++ + A+ +FK M + +N+ P +Y+ L G+ +Y+
Sbjct: 590 YTILINGFCKSKMVDEALNLFKEM-HQKNM--VPDTVTYSSLVDGLCKSGRISYVWD--- 643
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
L +M + G D+ + NS+I G + H++ A+ +F++M G+ PN+F+
Sbjct: 644 -----LIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGI----RPNTFT 694
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ L+ GLC GR K+A+E+ ++ KG+ YN ++ G +EE + L +M
Sbjct: 695 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
E + +T+ +++ + ++ +A KLL+++ + L+
Sbjct: 755 ENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ +++ G PD +LN++IKG L V +AL FH + + N SY LI+G+
Sbjct: 50 VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALH-FHDKLLAQGFQLNQVSYATLINGV 108
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G T+ A + ++ + P+ + YN+++ AL V E EM K +
Sbjct: 109 CRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANV 168
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
+TY T++ C G+ EA+ LL + K + TY L+D L
Sbjct: 169 VTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDAL 213
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 91/232 (39%), Gaps = 32/232 (13%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+IY F KL A+ + M P++ +YNIL A GK V
Sbjct: 171 YSTLIYGFCIVGKLKEALGLLNVMVLK---TINPNVCTYNILVDALCKEGKVKEAKSVLA 227
Query: 236 ETIRC---------------------------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
++ +F M G+ PD+ S N MI G+
Sbjct: 228 VMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIK 287
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V+ AL +F +M + + P ++ ++ A L ++ KG P +
Sbjct: 288 RVDKALNLFKEM--ILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTL 345
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
N L++ G++ L +++++ P +T T++ +C +G+ +A+
Sbjct: 346 NILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKAL 397
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+P++ +++I V++A +F +M V + +Y LI+G C G+ K A
Sbjct: 444 KPNVEMYSTIIDALCKYQLVSEAYGLFSEM-TVKGISADVVTYSTLIYGFCIVGKLKEAI 502
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL--- 367
L +EM K P ++Y LV AL G+V+E L M++ D TY T++
Sbjct: 503 GLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGY 562
Query: 368 --------------------------------DEICRRGRAGEAMKLLKELQNKNLI-DG 394
+ C+ EA+ L KE+ KN++ D
Sbjct: 563 LLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDT 622
Query: 395 YTYTKLLDVL 404
TY+ L+D L
Sbjct: 623 VTYSSLVDGL 632
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+P++ N++I V++A +F +M V N +Y LI+G C G+ K A
Sbjct: 130 KPNVEMYNTIIDALCKYQLVSEAYGLFSEM-TVKGISANVVTYSTLIYGFCIVGKLKEAL 188
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
L + M K P+ +YN LV AL G+V+E L M++ + ITY T++D
Sbjct: 189 GLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMD 246
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 89/231 (38%), Gaps = 45/231 (19%)
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
K+++ +P++ YN + A K ++ Y LF +M GI ++
Sbjct: 118 IKFLRKIDGRLAKPNVEMYNTIIDALC---KYQLVSEAY-----GLFSEMTVKGISANVV 169
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC-- 313
+ +++I G+ + + +AL + + M V+ PN +Y+ L+ LC +G+ K A+ +
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVM-VLKTINPNVCTYNILVDALCKEGKVKEAKSVLAV 228
Query: 314 ---------------------------------DEMKRKGFVPSSKSYNSLVSALALNGE 340
+ M G P SYN +++
Sbjct: 229 MLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKR 288
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
V++ + EMI + P I + +LD + A+ L L+ K +
Sbjct: 289 VDKALNLFKEMILSRFP-PIIQFNKILDSFAKMKHYSTAVSLSHRLELKGI 338
>gi|356503811|ref|XP_003520696.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Glycine max]
Length = 506
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 19/275 (6%)
Query: 123 LFNWASKQ-PRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG--------TE 173
LF WAS FRH T+H M R L + ++ +++ + + P C T+
Sbjct: 75 LFTWASSSLDSFRHTHLTFHWMARSLASTHRLPQLRTLLHLISSNPCPCSPSIFSCPQTQ 134
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+++ I+ F+++ L+ AV F M + ++ +P++ N+L AF+ RG
Sbjct: 135 PIFSLSIHAFSKSNLLNDAVSAFHSM--CKLIDGKPNVAVCNLLIHAFVKRGSLNAALQF 192
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
Y E + + ++PD+F+ N +I GY ++ N AL +FH+MG + LPN ++
Sbjct: 193 YREMV-------LKHRVKPDVFTFNILISGYCRNSQFNLALEMFHEMGKM-GCLPNVVTF 244
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LI GL +G + A + EM + G SS S LV L G V + + L E E
Sbjct: 245 NTLIKGLFREGNVEEAIGMAREMVQLGIRFSSVSCEILVQGLCKEGRVLQACELLLEFCE 304
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
K+ + +L+ +C G A A++++ EL N
Sbjct: 305 KKVLPEGFDCFALLEVLCGEGYAMRALEVVYELWN 339
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++ R L ++M+ +G+ D+ + N +++ N+A R+ + + P+ +Y
Sbjct: 362 IDEARRLVERMLEEGLVLDVVTFNCVLRDICDKRRTNEANRL-RLLASSKGFEPDEMTYR 420
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
L+ G +G + L DEM GF+P SYN L+S L+
Sbjct: 421 ILVMGYIGEGGREQGELLVDEMLDMGFIPDLASYNQLMSGLS 462
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 13/293 (4%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ Q+DPL LE+FN ++ F+H TY + +KLG + M++V+ +
Sbjct: 13 VLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDN 72
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
E +Y + + K+ AV VF+ M C PS+ SYN + + G
Sbjct: 73 SLLEGVYIGAMKSYGRKGKVQEAVDVFERMD---FYNCEPSVLSYNAIMNILVESG---- 125
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
Y + +F +M N GI PD+++ IK + + + ALR+ + M V N
Sbjct: 126 ----YFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNM-VSQGCQLN 180
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ +Y ++ G + A EL ++M R G P ++N L+ L GEV+E+ + L
Sbjct: 181 AVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLN 240
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
++++K + T+ + +CR+G AM +L + + L D TY L+
Sbjct: 241 KVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLI 293
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 15/282 (5%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
ELFN + F D ST++ + L QE + ++N++L C +N I
Sbjct: 202 ELFNDMLRIGIFP-DVSTFNKLLHTLCKKGEVQESERLLNKVLK-KGMCSNLFTFNIFIQ 259
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
LS A+ + + P + +YN L L + N Y+
Sbjct: 260 GLCRKGMLSGAMSMLDSVIREG---LTPDVVTYNTLICG-LCKNSNVVEAEKYLH----- 310
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
++VN G+EPD F+ N++I GY + +A +I Q + ++P+ F+Y LI+GLC
Sbjct: 311 --KLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKIL-QGAICKGFVPDEFTYCSLINGLC 367
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
A L + KG P+ YN L+ L G + + ++ + EM E D
Sbjct: 368 QNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIW 427
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
TY V++ +C+ G +A L+ + K + D +T+ L+D
Sbjct: 428 TYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLID 469
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + M Q + ++ Q F E Y ++I + ++ RA+ +
Sbjct: 320 DGFTYNTLIDGYCKMGMLQNAEKIL-QGAICKGFVPDEFTYCSLINGLCQNDEIDRALAL 378
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F + +P++ YN+L G + ++ ++ + +M +G DI+
Sbjct: 379 FN---AALGKGLKPTVILYNMLIKGLCQEG-------LILQALQ-MMNEMSENGCSSDIW 427
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N +I G V+DA + + + Y+P+ F+++ LI G C Q + + ++ ++
Sbjct: 428 TYNLVINGLCKMGCVSDANNLMND-AIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNK 486
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G P +YNS+++ L+ + E+ ++ M+EK + ITY + + +C+ G+
Sbjct: 487 MWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGK 546
Query: 376 AGEAMKLLKELQNKNL 391
EA+ L+ E+ NK +
Sbjct: 547 VNEALDLVDEILNKGI 562
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ ++ +G+ PD+ + N++I G +++V +A + H++ V P+ F+Y+ LI G
Sbjct: 273 MLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL-VNGGLEPDGFTYNTLIDGY 331
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G +NA ++ KGFVP +Y SL++ L N E++ + + K
Sbjct: 332 CKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTV 391
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
I Y ++ +C+ G +A++++ E+ +N D +TY +++ L
Sbjct: 392 ILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGL 436
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ ++A K + F+ M C P+ +YNIL + GK +N
Sbjct: 499 YNSVLNGLSKAVKNEDLMETFETMVEKG---CVPNKITYNILTESLCKAGK---VNEALD 552
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +++N GI PD S ++I G+ + + A ++F +MG Y + +Y+
Sbjct: 553 -----LVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNI 607
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+ + +L EM G P + +Y ++ + G + K L EMIEK
Sbjct: 608 MINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKG 667
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL 383
T+ V++ +C + R EA+ ++
Sbjct: 668 FIPSLTTFGRVINCLCVQHRVHEAVDII 695
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 131/336 (38%), Gaps = 52/336 (15%)
Query: 98 LPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD 157
+P F L N + ++ L LFN A+ + Y+++ + L + +
Sbjct: 353 VPDEFTYCSLINGLCQNDEIDRALALFN-AALGKGLKPTVILYNMLIKGLCQEGLILQAL 411
Query: 158 DVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
++N+M + + C ++ YN +I + +S A M ++ P + ++N
Sbjct: 412 QMMNEM--SENGCSSDIWTYNLVINGLCKMGCVSDA---NNLMNDAIAKGYVPDVFTFNT 466
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
L + Y + MET + +M + G+ PD+ + NS++ G + D +
Sbjct: 467 LI--------DGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMET 518
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F M V +PN +Y+ L LC G+ A +L DE+ KG P + S+ +++S A
Sbjct: 519 FETM-VEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFA 577
Query: 337 LNGEVEETVKNLWEMIEKQR------------------------------------PVDF 360
NG+++ + M E+ + D
Sbjct: 578 NNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDT 637
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
TYR ++D C G K L E+ K I T
Sbjct: 638 YTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLT 673
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 109/245 (44%), Gaps = 14/245 (5%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T LYN +I + + +A+ + M + C I +YN++ G + N
Sbjct: 390 TVILYNMLIKGLCQEGLILQALQMMNEMSENG---CSSDIWTYNLVINGLCKMGCVSDAN 446
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ L + G PD+F+ N++I GY + ++I ++M + P+
Sbjct: 447 N--------LMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWS-HGVTPDVI 497
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ +++GL + ++ E + M KG VP+ +YN L +L G+V E + + E+
Sbjct: 498 TYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEI 557
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNS 411
+ K D +++ T++ G A +L + + + + T T +++ + F
Sbjct: 558 LNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTAT--YNIMINAFAEK 615
Query: 412 IRHHL 416
+ H+
Sbjct: 616 LDLHM 620
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 23/235 (9%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY+I+T L A E D+V+++L TP + TII FA L A +
Sbjct: 533 TYNILTESLCKAGKVNEALDLVDEILNKGITPD----TVSFATIISGFANNGDLKGAYQL 588
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ M + + +YNI+ AF + + + LF +M G PD +
Sbjct: 589 FRRM--GEQYKVSHTTATYNIMINAFAEK--------LDLHMGEKLFLEMGAGGCAPDTY 638
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ MI G+ ++ + + + +M + ++P+ ++ +I+ LC Q R A ++
Sbjct: 639 TYRVMIDGFCITGNTDSGYKFLLEM-IEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHF 697
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
M G VP + NS+ A + +V K + E + K+ + + Y + D I
Sbjct: 698 MVHNGIVP--EVVNSISEA---DKKVVAAPKIVVEDLLKRSCITYYAYELLYDGI 747
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 53/313 (16%)
Query: 129 KQPRFRHDASTY-HIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEAR 187
K F DA T+ I+T A + MD + M P+ Y +I FA A+
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHL-RSMGCDPNV----VTYTALIAAFARAK 193
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL A+ + + M R C P++ +YN+L A V K+M+
Sbjct: 194 KLEEAMKLLEEM---RERGCPPNLVTYNVLVDALCKLSMVGAAQDV--------VKKMIE 242
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL------------ 287
G P++ + NS++ G+ +V+DA ++ M V Y+ L
Sbjct: 243 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 302
Query: 288 --------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
P++F+Y LIHGLC + + A ++ M G P Y+S++
Sbjct: 303 AKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 362
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN--L 391
A +G++ E K L EM ++++ D +TY TV+D +C+ G+ EA +L+++Q L
Sbjct: 363 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVL 422
Query: 392 IDGYTYTKLLDVL 404
D TY+ +++ L
Sbjct: 423 PDVVTYSTVINGL 435
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 132/274 (48%), Gaps = 19/274 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
DA TY + L A +E + ++ +M S C + + Y++II+ F ++ KL A
Sbjct: 318 DAFTYSALIHGLCKADKIEEAEQMLRRMAG--SGCTPDVVVYSSIIHAFCKSGKLLEAQK 375
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG-IEPD 253
+ M+ R P + +YN + GK + + + +QM G + PD
Sbjct: 376 TLQEMRKQRK---SPDVVTYNTVIDGLCKLGK--------IAEAQVILEQMQESGDVLPD 424
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + +++I G S+ + +A ++ +M P+ +Y +I GLC GR + A L
Sbjct: 425 VVTYSTVINGLCKSDMLVEAQKLLDRM-CKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLL 483
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
MKR G P+ +Y +L+S L +V+E + + EM P + +TY T+++ +C
Sbjct: 484 QGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVS 543
Query: 374 GRAGEAMKLLKELQNKNL---IDGYTYTKLLDVL 404
GR EA +L++ +++ D TY +++ L
Sbjct: 544 GRIKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 577
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 142/293 (48%), Gaps = 26/293 (8%)
Query: 115 EDPLVCLELFNWASKQ-PRFRHDASTYHIMTRKLGAAKMYQEMDDVV-NQMLAT--PSFC 170
+D + L F WA P F H A +++ + + L K ++E D+ +++LA+ P C
Sbjct: 54 KDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVC 113
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTY 229
YN +I F A L A+ + + MK++ P ++ + TA + G +
Sbjct: 114 S----YNIVISGFCNAGDLHAALELLEEMKSAGF---APDAFTHTPIITAMANAGDLDGA 166
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
++H + M G +P++ + ++I + + + +A+++ +M PN
Sbjct: 167 MDH---------LRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRE-RGCPPN 213
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+Y+ L+ LC A+++ +M GF P+ ++NSLV G V++ K L
Sbjct: 214 LVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLG 273
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
M+ K + +TY ++D +C+ + EA ++L+E++ + + D +TY+ L+
Sbjct: 274 IMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALI 326
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 12/258 (4%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
R + TY + L ++ + E +V+ +M T Y+ +I+ +A K+ A
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEM-KTRGVTPDAFTYSALIHGLCKADKIEEA 338
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M S C P + Y+ + AF GK +E + L ++M P
Sbjct: 339 EQMLRRMAGSG---CTPDVVVYSSIIHAFCKSGK-------LLEAQKTL-QEMRKQRKSP 387
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + N++I G + +A I QM + LP+ +Y +I+GLC A++L
Sbjct: 388 DVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKL 447
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M + G P +Y +++ L G +EE L M + +TY T++ +C+
Sbjct: 448 LDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCK 507
Query: 373 RGRAGEAMKLLKELQNKN 390
+ EA ++++E++N
Sbjct: 508 ARKVDEAERVMEEMRNAG 525
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 134/272 (49%), Gaps = 14/272 (5%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R D Y+ + L K+ E D +M + F Y+T+I F A +L A
Sbjct: 269 RPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDV-ITYSTLICGFCLAGQLMGAF 327
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ M +N+ P + +Y IL A GK ++ + L M +G++P+
Sbjct: 328 SLLNEM-TLKNI--NPDVYTYTILIDALCKEGK--------LKEAKNLLGVMTKEGVKPN 376
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + ++++ GY L V++A +IFH M V P+ SY+ +I+GLC A L
Sbjct: 377 VVTYSTLMDGYCLVGEVHNAKQIFHAM-VQTEVNPSVCSYNIMINGLCKGKSVDEAMNLL 435
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
EM K VP++ +YNSL+ L +G + + + E+ + +P D ITY ++LD +C+
Sbjct: 436 REMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKN 495
Query: 374 GRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+A+ L +++ + + + YTYT L+D L
Sbjct: 496 QNLDKAIALFMKMKERGIQPNKYTYTALIDGL 527
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 112/253 (44%), Gaps = 17/253 (6%)
Query: 158 DVVNQMLATPSFCGTEALYNT--IIYFFAEARKLSRAVYVFKYMKNSRNLECR---PSIR 212
DVV+ A F G + NT II F L + + + S+ +E + P +
Sbjct: 111 DVVHD--AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLV 168
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+ +IL F G+ + V + ++ G +P+ L +++KG L V
Sbjct: 169 TLSILINCFCHLGQMAFSFSVLGKILKL--------GYQPNTIILTTLMKGLCLKGEVKK 220
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
+L FH V + N SY L++GLC G T+ A +L ++ + P YN+++
Sbjct: 221 SLH-FHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTII 279
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
L + V E EM + D ITY T++ C G+ A LL E+ KN+
Sbjct: 280 DGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNIN 339
Query: 392 IDGYTYTKLLDVL 404
D YTYT L+D L
Sbjct: 340 PDVYTYTILIDAL 352
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
Q PS C YN +I + + + A+ + + M + + P+ +YN L
Sbjct: 405 QTEVNPSVCS----YNIMINGLCKGKSVDEAMNLLREMLHKNVV---PNTVTYNSLIDGL 457
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM- 280
G+ T + L K++ + G D+ + S++ G + +++ A+ +F +M
Sbjct: 458 CKSGRIT--------SALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMK 509
Query: 281 --GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
G+ PN ++Y LI GLC R KNA++L + KG +YN ++ L
Sbjct: 510 ERGIQ----PNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKE 565
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
G ++E + +M + D +T+ ++ + + +A KLL E+ K L+
Sbjct: 566 GMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 23/235 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYM--KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
YNT++Y +L AV +F M KN +P I ++NIL G+
Sbjct: 157 YNTLMYGCLIVGRLKEAVGLFNQMLLKN-----IKPDIYTFNILVDGLCKEGE------- 204
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNS 290
M+ R + M+ ++PD+ + NS++ GY L N A +F+ M GV P+
Sbjct: 205 -MKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVT----PDV 259
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
SY +I+GLC A L EM K P++ +Y+SL+ L +G + + + E
Sbjct: 260 HSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNE 319
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
M + +P D ITY ++LD +C+ + +A+ LL +++++ + D YTYT L+D L
Sbjct: 320 MHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGL 374
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY---- 264
P+I + +F + + INH + T+ L QM GI+ D+ +LN ++ +
Sbjct: 6 PTIFEFGKIFASLVK------INHFH--TVISLSHQMELRGIQTDLVNLNILVNCFCHLG 57
Query: 265 --ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
L++ V + L FH + + N SY LI GLC G T+ A ++ +
Sbjct: 58 QVCLNDKVKETLH-FHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQ 116
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P+ Y++++ +L + V + +M+ K+ D ITY T++ GR EA+ L
Sbjct: 117 PNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGL 176
Query: 383 LKELQNKNL-IDGYTYTKLLDVL 404
++ KN+ D YT+ L+D L
Sbjct: 177 FNQMLLKNIKPDIYTFNILVDGL 199
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 101/187 (54%), Gaps = 16/187 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+I YN L G ++ R LF M G+EPD + ++MI GY S
Sbjct: 393 PNIFIYNALVDGLCKSGD--------IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 444
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+V +A +FH+M GV P+SF Y+ L+HG C +G + A L EM +KGF ++
Sbjct: 445 NVAEAFSLFHEMPSKGVQ----PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TT 499
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
S+N+L+ + +++E + EMI KQ D +TY TV+D C+ G+ EA L KE
Sbjct: 500 LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 559
Query: 386 LQNKNLI 392
+Q +NLI
Sbjct: 560 MQERNLI 566
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 18/219 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ I +++ K++ A F M + + P+ Y +L G M
Sbjct: 258 FGAFILGYSKTGKMTEAAKYFDEMLDHGLM---PNNPLYTVLINGHFKAGN-------LM 307
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
E + +F+ + G+ PD+ + ++ I G + + V +AL++F ++ G+V P+ F+
Sbjct: 308 EALS-IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV----PDVFT 362
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI G C QG + A EL DEM KG P+ YN+LV L +G+++ K M
Sbjct: 363 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 422
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
EK D +TY T++D C+ EA L E+ +K +
Sbjct: 423 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 461
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 22/255 (8%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
AAK + EM D M P LY +I +A L A+ +F+++ L
Sbjct: 274 AAKYFDEMLDH-GLMPNNP-------LYTVLINGHFKAGNLMEALSIFRHL---HALGVL 322
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P +++ + L G+ E ++ +F ++ G+ PD+F+ +S+I G+
Sbjct: 323 PDVQTCSAFIHGLLKNGR-------VQEALK-VFSELKEKGLVPDVFTYSSLISGFCKQG 374
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V A + +M + PN F Y+ L+ GLC G + AR+L D M KG P S +Y
Sbjct: 375 EVEKAFELHDEM-CLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY 433
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQ-RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
++++ + V E EM K +P F+ Y ++ C+ G +AM L +E+
Sbjct: 434 STMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV-YNALVHGCCKEGDMEKAMNLFREML 492
Query: 388 NKNLIDGYTYTKLLD 402
K ++ L+D
Sbjct: 493 QKGFATTLSFNTLID 507
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I+ + K+ +A + K M L C+P+ R++ +L Y M
Sbjct: 83 YNVLIHGLCKFGKMEKAAEILKGM---ITLGCKPNSRTFCLLIEG--------YCREHNM 131
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M + P S +MI G ++ A ++ +M PN Y
Sbjct: 132 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKM-TFSGLKPNVVVYST 190
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G ++GR + AR L D M G P YN+++S L+ G++EE L E+ +
Sbjct: 191 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 250
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D +T+ + + G+ EA K E+ + L+
Sbjct: 251 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 287
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 46/211 (21%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ +Y I+ TA L R K M + F++M G++PD + +++I G++
Sbjct: 8 PNTYTYTII-TAGLCRAKR-------MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 59
Query: 269 HVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNAR----------------- 310
+++ LRI M V +P N +Y+ LIHGLC G+ + A
Sbjct: 60 DIDEVLRIKDVM--VSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 117
Query: 311 ------------------ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
EL DEM+++ VPS+ SY ++++ L ++ K L +M
Sbjct: 118 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 177
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ + Y T++ GR EA +LL
Sbjct: 178 FSGLKPNVVVYSTLIMGYASEGRIEEARRLL 208
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 55/100 (55%)
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+PN+++Y + GLC R A+ +EM++ G P + ++L+ G+++E ++
Sbjct: 7 VPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLR 66
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
M+ P++ ITY ++ +C+ G+ +A ++LK +
Sbjct: 67 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGM 106
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 47/253 (18%), Positives = 104/253 (41%), Gaps = 30/253 (11%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN +++ + + +A+ +F+ M + S+N L + Y
Sbjct: 467 VYNALVHGCCKEGDMEKAMNLFREMLQKG----FATTLSFNTLI--------DGYCKSCK 514
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG------------- 281
++ LF++M+ I PD + ++I + + + +A +F +M
Sbjct: 515 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALF 574
Query: 282 ---VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
V P+ +Y +I+ C + A +L DE+ KG + ++ L++AL
Sbjct: 575 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 634
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYT 398
++ E K L EM E T++ G+ EA ++ + +++ L+ T
Sbjct: 635 EDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVP--DTT 692
Query: 399 KLLDVLEDDFGNS 411
L+D++ + ++
Sbjct: 693 TLIDLVNGNLNDT 705
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 29/324 (8%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+ + R + L PR ++C V+ LQ D V L F WA +Q R+RHD Y+ M L
Sbjct: 89 EGELRHLLRSLKPR----QVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEIL 144
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
K+ Q V+ +++A + ++ ++ A KL A+ V M+ + +E
Sbjct: 145 SKTKLCQGAKRVL-RLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKA-GIEP 202
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYM-----ETIRCLFKQMVNDGIEPDIFSLNSMIK 262
SI NT I+ + M + +R L + + + IEP++ + N +IK
Sbjct: 203 DLSI--------------CNTAIHVLVMGNRLDKAVRFLERMQIVE-IEPNVITYNCLIK 247
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM-KRKGF 321
GY + + DA+ + +M P+ SY ++ LC + R K R L ++M K
Sbjct: 248 GYCDLHRLEDAMELIAEMP-FKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNL 306
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P +YN+ V L+ +G +E ++ L E E++ VD + Y ++ CR GR +A +
Sbjct: 307 LPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKE 366
Query: 382 LLKELQNKNLI-DGYTYTKLLDVL 404
++ E+ +K I D TYT +++ L
Sbjct: 367 IVNEMFSKGCIPDVVTYTSVINGL 390
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 129/305 (42%), Gaps = 48/305 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +Y+ + L K +E+ ++ +ML + + YNT ++ + K
Sbjct: 273 DKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLS---KHGHGDEA 329
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
++++ + R Y+ + +F G+ M+ + + +M + G PD+
Sbjct: 330 LEFLREAEERRFRVDKVGYSAIVHSFCREGR--------MDKAKEIVNEMFSKGCIPDVV 381
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM-----------------GVVYN------------- 285
+ S+I G V+ A ++ QM G+ N
Sbjct: 382 TYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMS 441
Query: 286 ----YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
++PN+ +Y L+HG +G++ A +L EM +KGF P+ N L+ +L +V
Sbjct: 442 EEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 501
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE--LQNKNLIDGYTYTK 399
+E + + + + V+ + + TV+ C++ A+ LL + L NK+ D TYT
Sbjct: 502 DEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKH-PDVVTYTT 560
Query: 400 LLDVL 404
++D L
Sbjct: 561 IIDAL 565
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 137/339 (40%), Gaps = 64/339 (18%)
Query: 124 FNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFF 183
F +++ RFR D Y + + ++VN+M + Y ++I
Sbjct: 332 FLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDV-VTYTSVINGL 390
Query: 184 AEARKLSRAVYVFKYM--------------------KNSRNLECR------------PSI 211
+ RK+ +A + + M KN +LE R P+
Sbjct: 391 CQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNA 450
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLF---------------------------KQ 244
+Y++L F GK++ + E I+ F +Q
Sbjct: 451 ITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQ 510
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
+N+G ++ + ++I G+ + + AL + M + N P+ +Y +I L +G
Sbjct: 511 CLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDM-YLSNKHPDVVTYTTIIDALGKKG 569
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R + A +L +M R G +P+ +Y +++ G VE+ +K L +M+ +Q Y
Sbjct: 570 RIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQEC--RTAYN 627
Query: 365 TVLDEICRRGRAGEAMKLL-KELQNKNLIDGYTYTKLLD 402
V++++C G +A KLL K L+ + ID T L++
Sbjct: 628 QVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIE 666
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 151/343 (44%), Gaps = 68/343 (19%)
Query: 127 ASKQPRFRHDASTYHIMTRKLGAAKMYQEMDD---VVNQMLATPSFCGTEALYNTIIYFF 183
A+K +R T I + + +DD V++ M+ + YN++IY +
Sbjct: 334 AAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 393
Query: 184 AEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK----NTYINHVYMETIR 239
+ + A+ V + M RN C+P++ SY IL F GK +N + + ++
Sbjct: 394 WKKGLVGLALEVLRDM---RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLK 450
Query: 240 -------CL----------------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
CL F++M G +PD+++ NS+I G + + AL +
Sbjct: 451 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 510
Query: 277 FHQM---GVV-----YNYLPNSF--------------------------SYDYLIHGLCA 302
M GVV YN L N+F +Y+ LI GLC
Sbjct: 511 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCR 570
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
G AR L ++M R G VPSS S N L++ L +G VEE V+ EM+ + D +T
Sbjct: 571 AGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 630
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ ++++ +CR GR + + + ++LQ + + D TY L+ L
Sbjct: 631 FNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWL 673
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 12/278 (4%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA 165
+LC ++ L D +ELF+W Q +RH Y ++ KLG+ ++ +D ++ QM
Sbjct: 74 QLCKLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQM-K 132
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
E+L+ +I+ + +A + + M+N + C P+ +SYN++ +S
Sbjct: 133 DEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYS--CEPTFKSYNVVLEILVSGN 190
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+ +V F M++ I P +F+ ++K N V+ AL + M +
Sbjct: 191 CHKVAANV--------FYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDM-TKHG 241
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+PNS Y LIH L R A +L +EM G VP ++++N ++ L + E
Sbjct: 242 CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAA 301
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
K + M+ + D ITY +++ +C+ GR A L
Sbjct: 302 KMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLF 339
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 117/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N++I E ++ A+++ + M + + + +YN L AFL RG+ +
Sbjct: 491 FNSLISGLCEVDEIKHALWLLRDMISEGVV---ANTVTYNTLINAFLRRGE--------I 539
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R L +MV G D + NS+IKG + V+ A +F +M + +P+S S +
Sbjct: 540 KEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM-LRDGLVPSSISCNI 598
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC G + A E EM +G P ++NSL++ L G +E+ + ++ +
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 658
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLDVL 404
P D +TY T++ +C+ G +A LL E +++ + + T++ LL L
Sbjct: 659 IPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
+E +VN+M+ S E YN++I A ++ +A +F+ M + PS S
Sbjct: 540 KEARKLVNEMVFQGSLL-DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLV---PSSIS 595
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
NIL G +E K+MV G PDI + NS+I G + + D
Sbjct: 596 CNILINGLCRSG--------MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 647
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
L +F ++ P++ +Y+ L+ LC G +A L DE GFVP+ ++++ L+
Sbjct: 648 LTMFRKLQA-EGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQ 706
Query: 334 ALA 336
+L
Sbjct: 707 SLV 709
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 8/179 (4%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
R S Y +L S G+ +TI L QM ++GI S+++ Y +
Sbjct: 102 RHSFDVYQVLIGKLGSNGE--------FKTIDRLLMQMKDEGIVFKESLFISIMRDYDKA 153
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
R+ +M VY+ P SY+ ++ L + K A + +M + P+ +
Sbjct: 154 GFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 213
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ ++ AL EV+ + L +M + + + Y+T++ + + R EA++LL+E+
Sbjct: 214 FGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 272
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 141/321 (43%), Gaps = 54/321 (16%)
Query: 121 LELFNWASKQPRFRHDASTYH-IMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI 179
LEL K F DA T+ I+T A + MD + M P+ Y +
Sbjct: 10 LELLEEM-KSAGFAPDAFTHTPIITAMANAGDLDGAMDHL-RSMGCDPNV----VTYTAL 63
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
I FA A+KL A+ + + M R C P++ +YN+L A V
Sbjct: 64 IAAFARAKKLEEAMKLLEEM---RERGCPPNLVTYNVLVDALCKLSMVGAAQDV------ 114
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNYL---- 287
K+M+ G P++ + NS++ G+ +V+DA ++ M V Y+ L
Sbjct: 115 --VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 172
Query: 288 ----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
P++F+Y LIHGLC + + A ++ M G P
Sbjct: 173 CKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV 232
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
Y+S++ A +G++ E K L EM ++++ D +TY TV+D +C+ G+ EA +L +
Sbjct: 233 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQ 292
Query: 386 LQNKN--LIDGYTYTKLLDVL 404
+Q L D TY+ +++ L
Sbjct: 293 MQESGDVLPDVVTYSTVINGL 313
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 130/276 (47%), Gaps = 23/276 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRA 192
DA TY + L A +E + ++ +M TP +Y++II+ F ++ KL A
Sbjct: 196 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV----VVYSSIIHAFCKSGKLLEA 251
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG-IE 251
+ M+ R P + +YN + GK + + + QM G +
Sbjct: 252 QKTLQEMRKQRK---SPDVVTYNTVIDGLCKLGK--------IAEAQVILDQMQESGDVL 300
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD+ + +++I G S+ + +A ++ +M P+ +Y +I GLC GR + A
Sbjct: 301 PDVVTYSTVINGLCKSDMLVEAQKLLDRM-CKAGCNPDVVTYTTIIDGLCKCGRLEEAEY 359
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L MKR G P+ +Y +L+S L +V+E + + EM P + +TY T+++ +C
Sbjct: 360 LLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLC 419
Query: 372 RRGRAGEAMKLLKELQNKNL---IDGYTYTKLLDVL 404
GR EA +L++ +++ D TY +++ L
Sbjct: 420 VSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 455
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
R + TY + L ++ + E +V+ +M A+ Y+ +I+ +A K+ A
Sbjct: 158 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKAS-GVTPDAFTYSALIHGLCKADKIEEA 216
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M S C P + Y+ + AF GK +E + L ++M P
Sbjct: 217 EQMLRRMAGSG---CTPDVVVYSSIIHAFCKSGK-------LLEAQKTL-QEMRKQRKSP 265
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + N++I G + +A I QM + LP+ +Y +I+GLC A++L
Sbjct: 266 DVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKL 325
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M + G P +Y +++ L G +EE L M + +TY T++ +C+
Sbjct: 326 LDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCK 385
Query: 373 RGRAGEAMKLLKELQN 388
+ EA ++++E++N
Sbjct: 386 ARKVDEAERVMEEMRN 401
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G A EL +EMK GF P + ++ +++A+A G+++ + +L M P +
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM--GCDP-NV 57
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNK----NLIDGYTYTKLLDVL 404
+TY ++ R + EAMKLL+E++ + NL+ TY L+D L
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLV---TYNVLVDAL 102
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 154/335 (45%), Gaps = 33/335 (9%)
Query: 98 LPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD 157
LPP F+ +L +++ Q D L LF WAS QP + S +H + R+L A + M
Sbjct: 53 LPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSML 112
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QM ++ E+ + + +A + L + ++ R+ +P R YN+
Sbjct: 113 TLLRQMHSS-KIPVDESTFLIFLETYATSHHLHAEINPL-FLLMERDFAVKPDTRFYNVA 170
Query: 218 FTAFLSRGKNTYINHVYMET---------------IRCLFK------------QMVNDGI 250
+ + K + ++ + IR L K M N G+
Sbjct: 171 LSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGL 230
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
PD + ++++G+I V ALRI ++ V S S + L++GLC +GR + A
Sbjct: 231 RPDEKTFTTLMQGFIEEADVEGALRI-KELMVESGCELTSVSVNVLVNGLCKEGRIEEAL 289
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
E +GF P ++N+LV+ L G +++ ++ + M+EK +D TY +++ +
Sbjct: 290 RFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGL 347
Query: 371 CRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
C+ G EA+++L + +++ + TY L+ L
Sbjct: 348 CKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTL 382
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 136 DASTYHIMTRKLGAAKMYQE----MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D ST++I+ R L A + ++D+ N L E + T++ F E +
Sbjct: 198 DVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRP-----DEKTFTTLMQGFIEEADVEG 252
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVYMETIRC----LFKQMV 246
A+ + + M S C + S N+L G+ + +Y E C F +V
Sbjct: 253 ALRIKELMVESG---CELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALV 309
Query: 247 ND--------------------GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
N G E D+++ NS+I G +++A+ I H M V +
Sbjct: 310 NGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM-VSRDC 368
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
PN+ +Y+ LI LC + + A EL + KG +P ++NSL+ L L E ++
Sbjct: 369 EPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAME 428
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
EM EK D TY +++ +C R EA+ LLKE++
Sbjct: 429 LFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEME 469
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 17/279 (6%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YN 177
+ +ELF K+ D TY I+ L + + +E ++ +M S C + YN
Sbjct: 425 IAMELFEEM-KEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM--ELSGCARNVVVYN 481
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T+I + ++ A +F M+ L S +YN L L + K +E
Sbjct: 482 TLIDGLCKNNRVGDAEDIFDQMEM---LGVSRSSVTYNTLING-LCKSKR-------VEE 530
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
L QM+ +G++PD F+ +M+K + + A I M + P+ +Y LI
Sbjct: 531 AAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNM-TLNGCEPDIVTYGTLI 589
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GLC GR A +L ++ KG V + ++YN ++ AL +E ++ EM+EK P
Sbjct: 590 GGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDP 649
Query: 358 VDFITYRTVLDEICRRGRA-GEAMKLLKELQNKNLIDGY 395
D ITY+ V +C G EA+ E+ K ++ +
Sbjct: 650 PDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEF 688
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 16/238 (6%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E+ V+ P C +N++I A+ +F+ MK C P +Y
Sbjct: 393 ELARVLTSKGVLPDVCT----FNSLIQGLCLTSNREIAMELFEEMKEKG---CDPDEFTY 445
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+IL + S + ++ L K+M G ++ N++I G +N V DA
Sbjct: 446 SILIESLCSERR--------LKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
IF QM ++ +S +Y+ LI+GLC R + A +L D+M +G P +Y +++
Sbjct: 498 DIFDQMEML-GVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKY 556
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
G+++ + M D +TY T++ +C+ GR A KLL+ +Q K ++
Sbjct: 557 FCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMV 614
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 101/251 (40%), Gaps = 37/251 (14%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + L +K +E +++QM+ + Y T++ +F + + RA + +
Sbjct: 514 TYNTLINGLCKSKRVEEAAQLMDQMIME-GLKPDKFTYTTMLKYFCQQGDIKRAADIVQN 572
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGK----NTYINHVYM------------------- 235
M + C P I +Y L G+ + + V M
Sbjct: 573 MTLNG---CEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCK 629
Query: 236 -----ETIRCLFKQMVNDGIEPDIFSLNSMIKGYI-LSNHVNDALRIFHQMGVVYNYLPN 289
E +R LF++M+ G PD+ + + +G + +A+ +M + LP
Sbjct: 630 RKRTKEAMR-LFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEM-LEKGILPE 687
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
S+ +L GLC+ +L + + KG S+S S++ + + + NL
Sbjct: 688 FPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRF--SQSETSIIRGFLKIQKFNDALANLG 745
Query: 350 EMIEKQRPVDF 360
++++++P F
Sbjct: 746 AILDRKKPRRF 756
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 154/338 (45%), Gaps = 23/338 (6%)
Query: 66 LSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFN 125
L R R +G RS + K + Q R + L P ++C V+ Q+D V L+ F
Sbjct: 143 LVREVGRLIGLRSSWNPK---HEGQMRNLLRSLKP----SQVCAVLRSQDDERVALKFFY 195
Query: 126 WASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
WA +Q R+RHD Y+ M L K+ Q V+ M + EA ++ ++ ++
Sbjct: 196 WADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEA-FSRVMVSYSR 254
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
A +L A+ V M+ + P++ N F+ + +E ++M
Sbjct: 255 AGQLRDALKVLTLMQRA---GVEPNLLICNTTIDVFVRANR--------LEKALRFLERM 303
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
GI P++ + N MI+GY + V +A+ + M LP+ SY ++ LC + R
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHS-KGCLPDKVSYYTIMGYLCKEKR 362
Query: 306 TKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R+L +M K G VP +YN+L+ L + +E + L + EK +D + Y
Sbjct: 363 IVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYS 422
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLD 402
++ +C+ GR EA L+ E+ D TYT +++
Sbjct: 423 AIVHALCKEGRMSEAKDLINEMDCPP--DVVTYTAVVN 458
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 117/268 (43%), Gaps = 24/268 (8%)
Query: 128 SKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEAR 187
+++ FR D Y + L E D++N+M P Y ++ F
Sbjct: 409 AQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPPDV----VTYTAVVNGFCRLG 464
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
++ +A + + M + +P+ SY L GK+ +E ++M+N
Sbjct: 465 EVDKAKKLLQVMHTHGH---KPNTVSYTALLNGMCRTGKS-------LEA-----REMMN 509
Query: 248 DGIE----PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
E P+ + + ++ G +++A + +M V+ + P + L+ LC
Sbjct: 510 MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREM-VLKGFFPGPVEINLLLQSLCRD 568
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
GRT AR+ +E KG + ++ +++ N E++ + L +M + D TY
Sbjct: 569 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 628
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL 391
T++D + ++GR EA +L+K++ +K +
Sbjct: 629 TTLVDTLGKKGRIAEATELMKKMLHKGI 656
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 15/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ I++ KLS A V + M P N+L + L R T+ +M
Sbjct: 523 YSVIMHGLRREGKLSEACDVVREMVLKGFF---PGPVEINLLLQS-LCRDGRTHEARKFM 578
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E CL N G ++ + ++I G+ ++ ++ AL + M ++ N + F+Y
Sbjct: 579 E--ECL-----NKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLI-NKHADVFTYTT 630
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ L +GR A EL +M KG P+ +Y +++ G+V++ V L +MI +Q
Sbjct: 631 LVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ 690
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL-KELQNKNLIDGYTYTKLLD 402
+ Y V++++C G+ EA LL K L+ + D T L++
Sbjct: 691 KCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALME 736
>gi|240255715|ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana]
gi|332656619|gb|AEE82019.1| uncharacterized protein [Arabidopsis thaliana]
Length = 1110
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q DPL+ E+F++AS+QP FRH S++ I+ KLG + + +DDV+ + ++ + T
Sbjct: 61 QSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSS-GYPLTG 119
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS-RGKNTYINH 232
++ +I +AEA+ + + F M P + N + +S RG
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKM---LEFNFTPQPKHLNRILDVLVSHRG------- 169
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
Y++ LFK G+ P+ S N +++ + L++ ++ A ++F +M + + +P+ S
Sbjct: 170 -YLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM-LERDVVPDVDS 227
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI G C +G+ A EL D+M KGFVP +L+ L G +E K L EMI
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMI 283
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEA 379
K F ++ C G+ EA
Sbjct: 284 SKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA-QGRTKNARELCDEMKR 318
+IK Y + L F++M + +N+ P + ++ L + +G + A EL +
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKM-LEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRL 183
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G +P+++SYN L+ A LN ++ + +M+E+ D +Y+ ++ CR+G+
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 379 AMKLLKELQNKNLIDGYT 396
AM+LL ++ NK + T
Sbjct: 244 AMELLDDMLNKGFVPDRT 261
>gi|7267637|emb|CAB80949.1| hypothetical protein [Arabidopsis thaliana]
Length = 1117
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q DPL+ E+F++AS+QP FRH S++ I+ KLG + + +DDV+ + ++ + T
Sbjct: 61 QSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSS-GYPLTG 119
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS-RGKNTYINH 232
++ +I +AEA+ + + F M P + N + +S RG
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKM---LEFNFTPQPKHLNRILDVLVSHRG------- 169
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
Y++ LFK G+ P+ S N +++ + L++ ++ A ++F +M + + +P+ S
Sbjct: 170 -YLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM-LERDVVPDVDS 227
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI G C +G+ A EL D+M KGFVP +L+ L G +E K L EMI
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMI 283
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEA 379
K F ++ C G+ EA
Sbjct: 284 SKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA-QGRTKNARELCDEMKR 318
+IK Y + L F++M + +N+ P + ++ L + +G + A EL +
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKM-LEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRL 183
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G +P+++SYN L+ A LN ++ + +M+E+ D +Y+ ++ CR+G+
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 379 AMKLLKELQNKNLIDGYT 396
AM+LL ++ NK + T
Sbjct: 244 AMELLDDMLNKGFVPDRT 261
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + + + +A+ +++ M L P++ ++ IL + M
Sbjct: 266 YNTMMDGYCKIAHVKKALELYQEMLGDGLL---PNVVTFGILIDGLCKTDE--------M 314
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R M + G+ P+IF N +I GY + ++++AL + H + LP+ F+Y
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL-HSEIEKHEILPDVFTYSI 373
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC R + A L EMK+KGF+P++ +YN+L+ G +E+ ++ +M EK
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ IT+ T++D C+ G+ AM L E+ K L+ D YT L+D
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 10/221 (4%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K V K++ + + P+I YN L + G + L ++
Sbjct: 310 KTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN--------LSEALSLHSEIEK 361
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
I PD+F+ + +IKG + + +A + +M +LPN+ +Y+ LI G C +G +
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK-KGFLPNAVTYNTLIDGYCKEGNME 420
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A E+C +M KG P+ ++++L+ G++E + EM+ K D + Y ++
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
D + G EA +L KE+Q L + +T + L+D L D
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN +I + +A LS A+ + ++ E P + +Y+IL +
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKH---EILPDVFTYSILIKGLCGVDR-------- 383
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME L ++M G P+ + N++I GY ++ A+ + QM PN ++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM-TEKGIEPNIITFS 442
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI G C G+ + A L EM KG +P +Y +L+ +G +E + EM E
Sbjct: 443 TLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ T ++D +C+ GR +A+KL
Sbjct: 503 GLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 130/305 (42%), Gaps = 40/305 (13%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE----MDDVVNQM------------- 163
LELF+ S++ + Y + L AK+Y + M D++ +
Sbjct: 54 LELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVF 113
Query: 164 -----LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
L + F T ++ +I F+E + A++V+ M + P++++ N++
Sbjct: 114 NVLSRLESSKF--TPNVFGVLIIAFSEMGLVEEALWVYYKM------DVLPAMQACNMVL 165
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
+ +G+ +T+ ++ MV G P++ + ++I G A R+F
Sbjct: 166 DGLVKKGR--------FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFD 217
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
+M + P Y LI GLC + R A + M+ G +P+ +YN+++
Sbjct: 218 EM-IEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTY 397
V++ ++ EM+ + +T+ ++D +C+ A K L ++ + ++ + Y
Sbjct: 277 AHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336
Query: 398 TKLLD 402
L+D
Sbjct: 337 NCLID 341
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 137/301 (45%), Gaps = 47/301 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+A Y+++ + AK+ + D+ +QM+A C YN +I F+ KL+ A+ +
Sbjct: 200 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK-RICPDVFTYNALISGFSAVSKLNYAIDL 258
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F MK P++ ++NIL F GK + + + M+ D I+PD+
Sbjct: 259 FNKMKKEN---INPNVYTFNILVDGFCKEGK--------VNDAKVVLAIMMKDDIKPDVV 307
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM---GVVYNY-------------------------- 286
+ NS++ GY N VN A IF M GV+ N
Sbjct: 308 TYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEM 367
Query: 287 -----LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
+PN +Y LI GLC GR A +L DEM +G P+ +Y+S++ AL N V
Sbjct: 368 RCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHV 427
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKL 400
++ + L + ++ D TY ++ +C+ GR +A + ++L K +D Y YT +
Sbjct: 428 DKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVM 487
Query: 401 L 401
+
Sbjct: 488 I 488
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N I+ +A+ S A+ + + M+ + ++NIL F G N+ +
Sbjct: 64 FNKILSSLVKAKHHSTALSLHQQMELNG---IESDFFTFNILINCFSQLGLNSLSFSI-- 118
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F +++ G P + N++IKG L H++ AL FH V + + SY
Sbjct: 119 ------FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALH-FHDKVVAQGFHLDQVSYGT 171
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC GR A +L + K P++ YN ++ + V + +M+ K+
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D TY ++ + A+ L +++ +N+ + YT+ L+D
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVD 279
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L K++ ++P+ N +I + VNDA ++ QM V P+ F+Y+ LI G
Sbjct: 188 LLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQM-VAKRICPDVFTYNALISGF 246
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
A + A +L ++MK++ P+ ++N LV G+V + L M++ D
Sbjct: 247 SAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDV 306
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+TY +++D C + +A + + + +I
Sbjct: 307 VTYNSLMDGYCSINKVNKAKDIFDSMASGGVI 338
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ D TY+ + + + D+ + M A+ +Y T++ F + + + A+
Sbjct: 303 KPDVVTYNSLMDGYCSINKVNKAKDIFDSM-ASGGVIANVQIYTTMVNGFCKIKMVDEAI 361
Query: 194 YVFKYMKNSRNLECR---PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+F+ M+ CR P++ +Y+ L G+ Y L +M + G
Sbjct: 362 NLFEEMR------CRKIIPNVVTYSSLIDGLCKLGRIFYALK--------LVDEMHDRGQ 407
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTK 307
P+I + +S++ ++HV+ A+ + + G+ P+ ++Y LI GLC GR +
Sbjct: 408 PPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI----RPDMYTYTILIKGLCQSGRLE 463
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A+ + +++ KG+ +Y ++ G ++ + L +M + + TY V+
Sbjct: 464 DAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVI 523
Query: 368 DEICRRGRAGEAMKLLKELQNKNLI 392
+ + A KLL+E+ + L+
Sbjct: 524 LSLFEKDENDTAEKLLREMIVRGLL 548
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
P F N ++ + + H + AL + QM G+ ++ F+++ LI+ G
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDF----FTFNILINCFSQLGLNSL 114
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
+ + ++ +KG+ P++ ++N+L+ L L G + + + +++ + +D ++Y T+++
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174
Query: 369 EICRRGRAGEAMKLLKELQNK 389
+C+ GR A++LLK + K
Sbjct: 175 GLCKVGRITAALQLLKRVDGK 195
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 136/280 (48%), Gaps = 28/280 (10%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D Y+I+ L K+ E ++ ++M A + Y T+IY F L A
Sbjct: 205 IKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNV-VTYTTLIYGFCIMGCLIEA 263
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V + MK +N+ P + +++IL A GK M+ + + M+ ++P
Sbjct: 264 VALLNEMK-LKNIN--PDVYTFSILIDALGKEGK--------MKAAKIVLAVMMKAYVKP 312
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
D+ + NS++ GY L N V A +F+ M GV P SY +I GLC A
Sbjct: 313 DVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVT----PGVQSYTIMIDGLCKTKMVDEA 368
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP----VDFITYRT 365
L +EMK K +P++ ++NSL+ L +G + +W++++K R D ITY +
Sbjct: 369 ISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAY----VWDLVDKMRDRSQLADVITYSS 424
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
++D +C+ +A+ L K++ + + D YTYT L+D L
Sbjct: 425 LIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGL 464
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 95/193 (49%), Gaps = 10/193 (5%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+ NIL F G+ T ++ + TI + G PD+ +L ++IKG L V
Sbjct: 106 TLNILINCFCHLGQIT-LSFSVLATI-------LKRGYHPDVITLTTLIKGLCLRGEVKK 157
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
AL+ FH V + + SY LI+GLC G TK A +L ++ + P YN ++
Sbjct: 158 ALK-FHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIII 216
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
+L N V E EM KQ + +TY T++ C G EA+ LL E++ KN+
Sbjct: 217 DSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNIN 276
Query: 392 IDGYTYTKLLDVL 404
D YT++ L+D L
Sbjct: 277 PDVYTFSILIDAL 289
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 108/234 (46%), Gaps = 13/234 (5%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
V N M + G ++ Y +I + + + A+ +F+ MK+ + P+ ++N L
Sbjct: 336 VFNSMAQSGVTPGVQS-YTIMIDGLCKTKMVDEAISLFEEMKHKNVI---PNTITFNSLI 391
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
G+ Y+ L +M + D+ + +S+I + H++ A+ +F
Sbjct: 392 DGLCKSGRIAYVWD--------LVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFK 443
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
+M + P+ ++Y LI GLC GR K A+E+ + KG+ ++Y ++S
Sbjct: 444 KM-ITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKA 502
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
G +E + L +M + + IT+ ++ + + +A KLL+E+ + L+
Sbjct: 503 GLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 37/200 (18%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L + + I+PD+ N +I + V +A ++ +M Y PN +Y LI+G
Sbjct: 196 LMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIY-PNVVTYTTLIYGF 254
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G A L +EMK K P +++ L+ AL G+++ L M++ D
Sbjct: 255 CIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDV 314
Query: 361 ITYRTV-----------------------------------LDEICRRGRAGEAMKLLKE 385
+TY ++ +D +C+ EA+ L +E
Sbjct: 315 VTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEE 374
Query: 386 LQNKNLI-DGYTYTKLLDVL 404
+++KN+I + T+ L+D L
Sbjct: 375 MKHKNVIPNTITFNSLIDGL 394
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
N NDA+ +F++M ++ P +F ++ ++ L R A L + KG +
Sbjct: 48 NDHNDAVALFNRM-LLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVT 106
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
N L++ G++ + L ++++ D IT T++ +C RG +A+K
Sbjct: 107 LNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALK 160
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 22/273 (8%)
Query: 140 YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYM 199
Y+ + L AK + + + M++ SF Y+ +I F + +L RA ++K M
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 200 KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNS 259
+ L C P++ +YN + +G+ VY E MV G PD+ + ++
Sbjct: 509 ID---LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEE--------MVAAGCSPDVITYST 557
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
+I G+ L+ + A +F M + PN+ +Y+ L+HGLC + + A EL +M +
Sbjct: 558 LIHGFSLARKHDQAHELFETM-ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 616
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G P +Y +L+ G++E+ V+ EM+ K D + Y +L R G+ GEA
Sbjct: 617 GCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEA 676
Query: 380 MKLLKELQNKN----------LIDGYTYTKLLD 402
+L + + ++ +IDG + K LD
Sbjct: 677 KQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLD 709
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 132/274 (48%), Gaps = 19/274 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
+ +TY+ L + V +M+A C + + Y+T+I+ F+ ARK +A
Sbjct: 516 NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAG--CSPDVITYSTLIHGFSLARKHDQAHE 573
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+F+ M SR CRP+ +YN L K + LF++MV G +PD
Sbjct: 574 LFETMI-SRG--CRPNAVTYNCLLHGLCKESKPDEAHE--------LFRKMVERGCDPDR 622
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ +++ G+ + A+ +F +M V + P+ +Y+ L+ G G+ A++L
Sbjct: 623 VTYTTLLYGFCNVGKIEQAVEVFDEM-VSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQ 681
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDEICR 372
M + P + S+N ++ L+ +++ V+ ++E +E+ D +TY +++ +C
Sbjct: 682 VMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVE-VFERMEQDHGCSPDLVTYNSLIFGLCG 740
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLE 405
R EAMK+ KE+ L D + + LL+ ++
Sbjct: 741 EQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIK 774
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRA 192
R +A TY+ + L E ++ +M+ C + + Y T++Y F K+ +A
Sbjct: 584 RPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG--CDPDRVTYTTLLYGFCNVGKIEQA 641
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V VF M + + P + +YN L F GK LF+ MV+ +P
Sbjct: 642 VEVFDEMVSKGH---DPDVVAYNCLLKGFFRAGKPGEAKQ--------LFQVMVSRQCKP 690
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D S N MI G + ++DA+ +F +M + P+ +Y+ LI GLC + R A ++
Sbjct: 691 DTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKV 750
Query: 313 CDEMKRKGFVPSSKSYNSLVSAL 335
E+ R P ++N L+ A+
Sbjct: 751 FKEIDRLKLSPDPHAFNVLLEAI 773
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 136/314 (43%), Gaps = 38/314 (12%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYN 177
L F W + F+HD TY+ + KL + ++ V +M+A P+ L
Sbjct: 114 LTFFRWLQAR-NFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172
Query: 178 TIIY---------FFAE----ARKLSRAVY--VFKYMKNS-----------RNLECRPSI 211
+ Y FF E K S +Y V + +K + R+LE R ++
Sbjct: 173 SSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAV 232
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
+L A L N I +E + LF+ MV G +PD + M+ + +++
Sbjct: 233 EM--MLKKALLV---NFVIQDKAIEASK-LFRAMVKSGCKPDATIYSYMVLAHCKLENLD 286
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
+A ++F +M V N+ ++ + GLC G+ + A E C M+ + S Y+ L
Sbjct: 287 EAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ-ESLSSSQPVYDML 345
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ L +G +++ + E+ + T +V+ E+C+ GR A+ LL+ + +
Sbjct: 346 IRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGY 405
Query: 392 I-DGYTYTKLLDVL 404
D T++ L++ L
Sbjct: 406 CPDMATHSMLINEL 419
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 120/234 (51%), Gaps = 21/234 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLE-CRPSIRSYNILFTAFLSRGKNTYINHVY 234
Y+ +I F +L A+ +F N LE +P + ++NIL F GK
Sbjct: 235 YSALISGFFTVGQLKDAIDLF----NKMILENIKPDVYTFNILVDGFCKDGK-------- 282
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
M+ + +F M+ GI+P++ + S++ GY L VN A I + M GV P+
Sbjct: 283 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVN----PDIQ 338
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
SY+ LI G C + A L EM K +P +YNSL+ L G++ +K + EM
Sbjct: 339 SYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 398
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
++ P D ITY ++LD +C+ + +A+ LL +L+++ + + YTYT L+D L
Sbjct: 399 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGL 452
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 93/165 (56%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L+ +MV+ GI P++ + +++I G+ + DA+ +F++M ++ N P+ ++++ L+ G
Sbjct: 219 LYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKM-ILENIKPDVYTFNILVDGF 277
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G+ K + + M ++G P+ +Y SL+ L EV + L+ M ++ D
Sbjct: 278 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDI 337
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+Y ++D C+ + EAM L KE+ +K++I D TY L+D L
Sbjct: 338 QSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGL 382
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G P+ + ++IKG L ++ AL +FH V + + Y LIHGLC G T+
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQAL-LFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRA 180
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L + P+ Y++++ + + V + EM+ K + +TY ++
Sbjct: 181 ALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 240
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
G+ +A+ L ++ +N+ D YT+ L+D
Sbjct: 241 GFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVD 275
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 67/166 (40%), Gaps = 15/166 (9%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV------------VYN 285
LF +++ P N ++ + S H + L + QM G+ +
Sbjct: 63 LFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMG 122
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
Y PN+ ++ LI GLC +G+ A D + GF Y +L+ L GE +
Sbjct: 123 YHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAAL 182
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
L + + + Y T++D +C+ +A L E+ +K +
Sbjct: 183 DLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGI 228
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 144/310 (46%), Gaps = 31/310 (10%)
Query: 94 AVSELPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKM 152
A++ L F+NE + V+ L+ +P LE F ASKQP+FR D S+Y + L A+M
Sbjct: 88 ALANLSFSFSNELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARM 147
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
Y+E+ +N+++ C + + + V V+ R P++
Sbjct: 148 YKEVRVYLNELVV---LCKNNYIASAV---------WDELVSVY------REFSFSPTV- 188
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
++++ F +G + C+F M G P + S NS++ + +
Sbjct: 189 -FDMILKVFAEKGMTKFA--------LCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFK 239
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
AL ++ QM + LP+ FSY +++ C +GR A EM+R P+ +YNSL+
Sbjct: 240 ALLVYEQM-IALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLI 298
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
G+V K L M EK P + TY ++ C+RG+ +A KL+ + KNL
Sbjct: 299 DGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLF 358
Query: 392 IDGYTYTKLL 401
+D + Y L+
Sbjct: 359 VDEHVYGVLI 368
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
CL M+N G+ P+I N++I G S +++ A R+F+++ P +Y+ LI G
Sbjct: 802 CLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLAR-KGLSPTVVTYNTLIDG 860
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
C GRT A EL D+M+ +G PSS +Y++L+ L + G+ E++V L EM++ +
Sbjct: 861 YCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGK 917
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 212 RSYNILFTAFLSRG--------------KNTYIN-HVYMETIRC------------LFKQ 244
R+Y +L + RG KN +++ HVY I +
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M+ G++ + NS+I GY HVN A + M +N P+S+ Y+ L+ G C Q
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKD-WNLKPDSYGYNTLLDGFCKQE 445
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV-DFITY 363
A +LCDEM KG + +YN+L+ L G VE + ++W ++ K+ + +TY
Sbjct: 446 DFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHAL-HIWNLMHKRGVAPNEVTY 504
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
T+LD + G AM + K+ +K T
Sbjct: 505 CTLLDAFFKVGTFDRAMMIWKDALSKGFTKSIT 537
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 76/145 (52%), Gaps = 2/145 (1%)
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N I G S +++D RI + ++ + P++++Y LIH A G+ A L D+M
Sbjct: 750 NIAITGLCKSKNIDDVRRILSDL-LLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMI 808
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
G VP+ YN+L++ L +G ++ + ++ K +TY T++D C+ GR
Sbjct: 809 NAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTT 868
Query: 378 EAMKLLKELQNKNLI-DGYTYTKLL 401
EA++L +++ + + TY+ L+
Sbjct: 869 EALELKDKMREEGICPSSITYSTLI 893
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YNI T L + KN ++ +R + ++ G PD ++ S+I VN+A
Sbjct: 749 YNIAITG-LCKSKN-------IDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEA 800
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
+ M + +PN Y+ LI+GLC G AR L +++ RKG P+ +YN+L+
Sbjct: 801 FCLRDDM-INAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLID 859
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
G E ++ +M E+ ITY T++ + G++ +++ LL E+
Sbjct: 860 GYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEM 912
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 106/263 (40%), Gaps = 46/263 (17%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN++I + +L + + MKN E P++ +Y L + +G
Sbjct: 608 MYNSLITGVFRSEELQKLNGLLAEMKNR---ELSPNVVTYGSLIAGWCDKG--------M 656
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG------------- 281
M+ + +M++ GI P+I + ++ +++A I HQ+
Sbjct: 657 MDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVE 716
Query: 282 -------------VVYNY--------LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+V ++ + N+ Y+ I GLC + R + ++ KG
Sbjct: 717 LPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKG 776
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
F P + +Y SL+ A + G+V E +MI + + Y +++ +C+ G A
Sbjct: 777 FCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRAR 836
Query: 381 KLLKELQNKNLIDG-YTYTKLLD 402
+L +L K L TY L+D
Sbjct: 837 RLFNKLARKGLSPTVVTYNTLID 859
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T YNT++ + A++++ M + R + P+ +Y L AF G
Sbjct: 465 TVVTYNTLLKNLFHVGHVEHALHIWNLM-HKRGVA--PNEVTYCTLLDAFFKVGT----- 516
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ ++K ++ G I N+MI G+ + A IF +M + + P+
Sbjct: 517 ---FDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKEL-GFPPDEI 572
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y LI G C G A +L D +R G S++ YNSL++ + + E+++ L EM
Sbjct: 573 TYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEM 632
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEA 379
++ + +TY +++ C +G +A
Sbjct: 633 KNRELSPNVVTYGSLIAGWCDKGMMDKA 660
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 19/185 (10%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
Y+I L +K ++ +++ +L FC Y ++I+ + K++ A +
Sbjct: 748 VYNIAITGLCKSKNIDDVRRILSDLL-LKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDD 806
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M N+ + P+I YN L G ++ R LF ++ G+ P + + N
Sbjct: 807 MINAGLV---PNIVVYNALINGLCKSGN--------LDRARRLFNKLARKGLSPTVVTYN 855
Query: 259 SMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
++I GY +AL + +M G+ P+S +Y LIHGL +G+++ + L +E
Sbjct: 856 TLIDGYCKGGRTTEALELKDKMREEGIC----PSSITYSTLIHGLYMEGKSEQSVGLLNE 911
Query: 316 MKRKG 320
M + G
Sbjct: 912 MMKAG 916
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 12/226 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y T++ F + RA+ ++K ++ + SI YN + F K
Sbjct: 501 EVTYCTLLDAFFKVGTFDRAMMIWK---DALSKGFTKSITLYNTMICGFCKMEKLVQAQE 557
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+++ +M G PD + ++I GY ++ +AL++ M ++
Sbjct: 558 IFL--------KMKELGFPPDEITYRTLIDGYCKVGNLVEALKL-KDMSERDGISSSTEM 608
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI G+ + L EMK + P+ +Y SL++ G +++ ++MI
Sbjct: 609 YNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMI 668
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYT 398
+K + I ++ + R G+ EA +L ++ + + I + ++
Sbjct: 669 DKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHS 714
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 102/273 (37%), Gaps = 50/273 (18%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
+ F + LYNT+I F + KL +A +F MK L P +Y L + G
Sbjct: 529 SKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMK---ELGFPPDEITYRTLIDGYCKVG 585
Query: 226 KNTYINHVYMETIRCLFKQMVN-DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
+E ++ K M DGI NS+I G S + + +M
Sbjct: 586 N-------LVEALK--LKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMK-NR 635
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
PN +Y LI G C +G A +M KG P+ + +VS+L +G+++E
Sbjct: 636 ELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEA 695
Query: 345 VKNLWEM----------------------IEKQRPVDF-------------ITYRTVLDE 369
L ++ +E Q+ VD I Y +
Sbjct: 696 NLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITG 755
Query: 370 ICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+C+ + ++L +L K D YTY L+
Sbjct: 756 LCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLI 788
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + + + +A+ +++ M L P++ ++ IL + M
Sbjct: 266 YNTMMDGYCKIAHVKKALELYQEMLGDGLL---PNVVTFGILIDGLCKTDE--------M 314
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R M + G+ P+IF N +I GY + ++++AL + H + LP+ F+Y
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL-HSEIEKHEILPDVFTYSI 373
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC R + A L EMK+KGF+P++ +YN+L+ G +E+ ++ +M EK
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ IT+ T++D C+ G+ AM L E+ K L+ D YT L+D
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 10/221 (4%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K V K++ + + P+I YN L + G + L ++
Sbjct: 310 KTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN--------LSEALSLHSEIEK 361
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
I PD+F+ + +IKG + + +A + +M +LPN+ +Y+ LI G C +G +
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK-KGFLPNAVTYNTLIDGYCKEGNME 420
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A E+C +M KG P+ ++++L+ G++E + EM+ K D + Y ++
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
D + G EA +L KE+Q L + +T + L+D L D
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN +I + +A LS A+ + ++ E P + +Y+IL +
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKH---EILPDVFTYSILIKGLCGVDR-------- 383
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME L ++M G P+ + N++I GY ++ A+ + QM PN ++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM-TEKGIEPNIITFS 442
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI G C G+ + A L EM KG +P +Y +L+ +G +E + EM E
Sbjct: 443 TLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ T ++D +C+ GR +A+KL
Sbjct: 503 GLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 130/305 (42%), Gaps = 40/305 (13%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE----MDDVVNQM------------- 163
LELF+ S++ + Y + L AK+Y + M D++ +
Sbjct: 54 LELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVF 113
Query: 164 -----LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
L + F T ++ +I F+E + A++V+ M + P++++ N++
Sbjct: 114 NVLSRLESSKF--TPNVFGVLIIAFSEMGLVEEALWVYYKM------DVLPAMQACNMVL 165
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
+ +G+ +T+ ++ MV G P++ + ++I G A R+F
Sbjct: 166 DGLVKKGR--------FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFD 217
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
+M + P Y LI GLC + R A + M+ G +P+ +YN+++
Sbjct: 218 EM-IEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTY 397
V++ ++ EM+ + +T+ ++D +C+ A K L ++ + ++ + Y
Sbjct: 277 AHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336
Query: 398 TKLLD 402
L+D
Sbjct: 337 NCLID 341
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 43/227 (18%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY I+ + L +E D ++ +M F YNT+I + + + +A+ V
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEM-KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME-TIRCLF------------ 242
M + +E P+I +++ L + GK +Y E I+ L
Sbjct: 426 CSQM-TEKGIE--PNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Query: 243 --------------KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF------HQMGV 282
K+M G+ P++F+L+ +I G ++DA+++F G
Sbjct: 483 HFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGS 542
Query: 283 VYNYL------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
N L PN Y LI GLC GR A + +M+ G P
Sbjct: 543 KTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 146/307 (47%), Gaps = 16/307 (5%)
Query: 85 ALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMT 144
A D+ R A+ E + + E + V+ DP L F WA + ++H+ + +
Sbjct: 74 ASDEQALRVALDEYRGQLSPEIVGKVLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCLL 133
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
L A Y + D+ + + G Y+T+I F A K+ A +F M N +
Sbjct: 134 NVLVKAHQYSQAHDLFRSRIEG-QWGGDTVTYSTLISGFIRAGKILPAYELFDEM-NRKG 191
Query: 205 LECRPSIRSYNILFTAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
L+ + + + G+ + + H F++M + PD + N+MI G
Sbjct: 192 LKAHAGV--HKSILRGLCDAGQCSDAVLH---------FREM-SKTCPPDSVTYNTMING 239
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
S+ ++DA+R+ +M V + PN FSY+ ++HG C R +NA L ++M +G P
Sbjct: 240 LSKSDRLDDAIRLLEEM-VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPP 298
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
SY ++++ L +V+E + + +MI++ + ITY T++D CR G A++L+
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358
Query: 384 KELQNKN 390
+++ +
Sbjct: 359 RKMTERG 365
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 19/287 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVV-NQMLATPSFCGTEALYNTI 179
L F+WA+ Q + HD T + + + L K ++ V N++ +P+ + +
Sbjct: 828 LGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNM----FTFTIL 883
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
I+ A + A + K M + ++ +N++ S K +++
Sbjct: 884 IHGLCRAGDIGTAYELLKEMPRHGVPQ---NVILHNVVIKGLCSARK--------LDSAL 932
Query: 240 CLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
LFK+M G PD+F+ ++++ + S V+DA R+ M V PN +Y L+H
Sbjct: 933 ELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDM-VSKGCSPNVVTYSSLLH 991
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC G+ A L M R G P+ +YN+++ G ++E L EM++
Sbjct: 992 GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQP 1051
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+ +TY +LD C+ G+A +A+ L++ + K + +TY LLD+
Sbjct: 1052 NVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 1098
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 15/268 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTI 179
LELF + D TY + L + + +V M++ C + Y+++
Sbjct: 932 LELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKG--CSPNVVTYSSL 989
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
++ +A KL A + + M S C P+I +YN + G+ I+ Y
Sbjct: 990 LHGLCKAGKLDEATALLQRMTRS---GCSPNIVTYNTIIDGHCKLGR---IDEAYH---- 1039
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
L ++MV+ G +P++ + ++ + DA+ + M V Y+PN F+Y+ L+
Sbjct: 1040 -LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM-VEKGYVPNLFTYNSLLDM 1097
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
C + + A +L M +KG VP+ SYN++++ L +V E V L +M+ D
Sbjct: 1098 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 1157
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQ 387
+T+ T++D +C+ R A +L +Q
Sbjct: 1158 IVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 13/231 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I+ +A++L A M +R C P + +YN + K+ IN ++
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVMVKNR---CYPDVVTYNSVVDGLC---KSRRINDAFL 531
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +M G+ PD+ + + +I + N+++ A ++ +M +P+ +Y
Sbjct: 532 -----LFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEA-KCVPDVVTYSA 585
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC G A ++ EM G P+ +YN+L+ L +VE+ + L M ++
Sbjct: 586 LINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQS 645
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVLE 405
D ITY +++ +C R EA ++L+E+++K L D TY LL L+
Sbjct: 646 CTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQ 696
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NTII + ++ A +F ++ S C P++ +YN L + ++
Sbjct: 1161 FNTIIDAMCKTYRVDIAYELFNLIQES---GCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 1217
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R KQ G PDI + N++I G S V+ A ++F QM + P+ +Y
Sbjct: 1218 EMTR---KQ----GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM-LSDGLAPDDVTYSI 1269
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC A + + M + GF P + +Y +L+ G +++ ++ L ++ K
Sbjct: 1270 VISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG 1329
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D +T+ +D + +RGR +A +LL+ + L+ D TY LL
Sbjct: 1330 SYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLL 1376
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 121/252 (48%), Gaps = 13/252 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y I+ L AK E + ++ M+ + YN+++ ++R+++ A +
Sbjct: 474 DVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDV-VTYNSVVDGLCKSRRINDAFLL 532
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M+ + + P + +Y+I+ +F K+ ++ + + ++M PD+
Sbjct: 533 FDRMRAAGVM---PDVVTYSIVIHSFC---KDNNLDSAFK-----MLERMKEAKCVPDVV 581
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +++I G + V+ A +F +M + PN +Y+ LI GLC + + A E+ +
Sbjct: 582 TYSALINGLCKAGTVDKAFDVFQEM-LGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEI 640
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+++ P S +Y L++ L +EE + L EM +K D +TY T+L + +
Sbjct: 641 MRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNN 700
Query: 376 AGEAMKLLKELQ 387
+LLKE++
Sbjct: 701 LELVEQLLKEME 712
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 12/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I +A K+ V + + M ++ C P I ++N + A TY +
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSN---NCVPDIVTFNTIIDAMC----KTYRVDIAY 1178
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF + G P++ + NS++ G S + A + +M P+ +Y+
Sbjct: 1179 E----LFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 1234
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC R A +L +M G P +Y+ ++S+L ++E L M++
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK-NLIDGYTYTKLLDVL 404
ITY T++D C+ G +A+++L+ L +K + D T++ +D L
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 1344
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 115/249 (46%), Gaps = 13/249 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D+ TY+ M L + + ++ +M+ F YNT+++ F +A ++ A+++
Sbjct: 229 DSVTYNTMINGLSKSDRLDDAIRLLEEMVDN-GFAPNVFSYNTVLHGFCKANRVENALWL 287
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M C P + SY + ++ V E R + +M+ G +P++
Sbjct: 288 LEQMVTR---GCPPDVVSYTTVINGLCK------LDQVD-EACR-VMDKMIQRGCQPNVI 336
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +++ G+ ++ A+ + +M Y PN+ +Y+ ++H C + + A ++
Sbjct: 337 TYGTLVDGFCRVGDLDGAVELVRKM-TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQM 395
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M + G P + +Y++++S G++ E L +MI + D T++D +C+
Sbjct: 396 MIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAA 455
Query: 376 AGEAMKLLK 384
A +LL+
Sbjct: 456 IDSAQELLR 464
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 103/227 (45%), Gaps = 35/227 (15%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E+ +++ + TP+ YN++++ ++R+ +A Y+ + M +R C P I +Y
Sbjct: 1179 ELFNLIQESGCTPNL----VTYNSLVHGLCKSRRFDQAEYLLREM--TRKQGCSPDIITY 1232
Query: 215 NI----------------LFTAFLSRGK-----------NTYINHVYMETIRCLFKQMVN 247
N LF LS G ++ +M+ + + M+
Sbjct: 1233 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+G +P + ++I G+ + +++ AL I Q+ + P+ ++ I L +GR +
Sbjct: 1293 NGFDPGAITYGTLIDGFCKTGNLDKALEIL-QLLLSKGSYPDVVTFSIFIDWLSKRGRLR 1351
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
A EL + M R G VP + +YN+L+ + + E +L+E++ +
Sbjct: 1352 QAGELLETMLRAGLVPDTVTYNTLLKGFC-DASLTEDAVDLFEVMRQ 1397
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ F L AV + + M RP+ +YN + F R M
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTERGY---RPNAITYNNIMHVFCRRND--------M 386
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + + M+ G PD + +++I G+ + + +A + QM + P+
Sbjct: 387 ERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQM-IRRGCRPDVACLST 445
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI LC +A+EL P +Y+ L+ AL + E L M++ +
Sbjct: 446 LIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNR 505
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D +TY +V+D +C+ R +A L ++ ++ D TY+ ++
Sbjct: 506 CYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVI 552
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 156/312 (50%), Gaps = 24/312 (7%)
Query: 97 ELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEM 156
ELP + +L ++ ++ P L LF+ AS+QP + H + ++ R+L K+ +
Sbjct: 3 ELPKPLSARQLFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHV 62
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
+V +++ T TE + T++ +A+++ + A+ F+ M+ C+P IRSYN
Sbjct: 63 TRIV-ELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEI--FGCKPGIRSYNA 119
Query: 217 LFTAF----LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
L AF L +++ Y ET+ GI P++ + N +IK + +
Sbjct: 120 LLNAFIEANLLEKAESFL--AYFETV----------GILPNLQTYNILIKISVKKRQFVE 167
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A + M + P+ +SY +I+G+ G +A E+ DEM +G VP YN ++
Sbjct: 168 AKGLLDWMW-SKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMI 226
Query: 333 SALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDEICRRGRAGEAMKLLKEL-QNK 389
G+ + K +WE + K V + +TY +++ +C+ GR E++++ + + +N+
Sbjct: 227 DGFFKRGDYVQG-KEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNE 285
Query: 390 NLIDGYTYTKLL 401
+D +TY+ L+
Sbjct: 286 CEMDLFTYSSLI 297
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 26/275 (9%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFCGTEALYNTIIYFFAEARK 188
+ DA Y + L E +V+QM +P C N +I F A K
Sbjct: 426 KLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVC------NPLINGFVRASK 479
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L A+ F+ M+ C P++ SYN L K + Y K+M+
Sbjct: 480 LEEAICFFREMETKG---CSPTVVSYNTLINGLC---KAERFSDAY-----SFVKEMLEK 528
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
+PD+ + + ++ G ++ AL ++ Q+ +V P+ ++ L+HGLC+ G+ ++
Sbjct: 529 DWKPDMITYSLLMDGLCQGKKIDMALNLWRQV-LVKGLEPDVTMHNILMHGLCSAGKIED 587
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE-MIEKQRPVDFITYRTVL 367
A L MK+ +P+ ++N+L+ L E E +W M + D I+Y L
Sbjct: 588 ALLLYSNMKQSNCLPNLVTHNTLMDGLYKAREC-EMASVIWACMFKNGFQPDIISYNITL 646
Query: 368 DEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLL 401
+C GR + + L + L+N L T+ L+
Sbjct: 647 KGLCSCGRISDGIALFDDALKNGILPTSITWYILV 681
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 12/222 (5%)
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
C YN I E RK+ A+ V++ ++ + +Y +L KN +
Sbjct: 356 CHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGS---GADSTTYGVLIHGLC---KNGH 409
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+N + K+ + G + D F+ +S++ G V++AL I HQM Y +
Sbjct: 410 LNKALK-----ILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDK-YGCELS 463
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ LI+G + + A EM+ KG P+ SYN+L++ L + +
Sbjct: 464 PHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVK 523
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
EM+EK D ITY ++D +C+ + A+ L +++ K L
Sbjct: 524 EMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGL 565
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 134/313 (42%), Gaps = 17/313 (5%)
Query: 74 VGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRF 133
V KR ++K LD + + P ++ + N M D + LE+F+ ++
Sbjct: 160 VKKRQFVEAKGLLD---WMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERG-L 215
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
D Y+IM Y + ++ +++ YN +I + + ++
Sbjct: 216 VPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESL 275
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+++ MK + EC + +Y+ L G VY K+MV + D
Sbjct: 276 EMWERMKKN---ECEMDLFTYSSLICGLCDVGNVDGAVEVY--------KEMVKRSVVVD 324
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + N+++ G+ + + ++ ++ MG N SY+ I GL + + A +
Sbjct: 325 VVTYNALLNGFCRAGKIKESFELWVMMG--KENCHNVVSYNIFIRGLFENRKVEEAISVW 382
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+ ++R+G S +Y L+ L NG + + +K L E + +D Y +++D + ++
Sbjct: 383 ELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQ 442
Query: 374 GRAGEAMKLLKEL 386
GR EA+ ++ ++
Sbjct: 443 GRVDEALGIVHQM 455
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 118/272 (43%), Gaps = 16/272 (5%)
Query: 135 HDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
H+ +Y+I R L + +E V ++L Y +I+ + L++A+
Sbjct: 357 HNVVSYNIFIRGLFENRKVEEAISVW-ELLRRRGSGADSTTYGVLIHGLCKNGHLNKALK 415
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ K K+ + + +Y+ + +G+ ++ + QM G E
Sbjct: 416 ILKEAKDGGD---KLDAFAYSSIVDGLSKQGR--------VDEALGIVHQMDKYGCELSP 464
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
N +I G++ ++ + +A+ F +M P SY+ LI+GLC R +A
Sbjct: 465 HVCNPLINGFVRASKLEEAICFFREMET-KGCSPTVVSYNTLINGLCKAERFSDAYSFVK 523
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFITYRTVLDEICRR 373
EM K + P +Y+ L+ L +++ + NLW +++ K D + ++ +C
Sbjct: 524 EMLEKDWKPDMITYSLLMDGLCQGKKIDMAL-NLWRQVLVKGLEPDVTMHNILMHGLCSA 582
Query: 374 GRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
G+ +A+ L ++ N L + T+ L+D L
Sbjct: 583 GKIEDALLLYSNMKQSNCLPNLVTHNTLMDGL 614
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 88/201 (43%), Gaps = 45/201 (22%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I +A + S A + ++K + +P + +Y++L L +GK +
Sbjct: 502 YNTLINGLCKAERFSDA---YSFVKEMLEKDWKPDMITYSLLMDG-LCQGKK-------I 550
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL 287
+ L++Q++ G+EPD+ N ++ G + + DAL ++ M V +N L
Sbjct: 551 DMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTL 610
Query: 288 --------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
P+ SY+ + GLC+ GR + L D+ + G
Sbjct: 611 MDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGI 670
Query: 322 VPSSKSYNSLVSALALNGEVE 342
+P+S ++ LV A+ G ++
Sbjct: 671 LPTSITWYILVRAVLKLGPLD 691
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+++K Y S N+AL F +M ++ P SY+ L++ + A +
Sbjct: 83 TVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFET 142
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G +P+ ++YN L+ + E L M K D +Y TV++ + + G
Sbjct: 143 VGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVS 202
Query: 379 AMKLLKELQNKNLI-DGYTYTKLLD 402
A+++ E+ + L+ D Y ++D
Sbjct: 203 ALEVFDEMFERGLVPDVMCYNIMID 227
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 158/355 (44%), Gaps = 37/355 (10%)
Query: 59 SCYSAIALSRSSSRGVGKRSK---ADSKPALDDTQFRCAVSE---------LPPRFNNEE 106
SC + L + RG G + A D +F A+ +P
Sbjct: 323 SCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSA 382
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDA----STYHIMTRKLGAAKMYQEMDDVVNQ 162
L N + ++ L +F W HD+ TY+++ + + Q+ + +Q
Sbjct: 383 LINQLYVEGRFETALTIFEWM-----LSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQ 437
Query: 163 ML-ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
ML A PS YN II+ + + ++ A+ + + MK + + +Y L + F
Sbjct: 438 MLKAGPS--PNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNG---LKLDTWTYANLISGF 492
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
GK + H + LF +MV GI P++ + N++I GY+ V+DAL +F +M
Sbjct: 493 SRGGK---LEHAF-----SLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKM- 543
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V +P+S +Y+ +I G R A C +M ++G +P+ +Y S + L NG
Sbjct: 544 VESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRT 603
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
K EM ++ + TY +++D +C+ G+A +A +LL + N +D YT
Sbjct: 604 SLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPN-VDTYT 657
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 144/316 (45%), Gaps = 32/316 (10%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
+S L P+ + N++ + L F+W S+ F+HD S + M +L +++
Sbjct: 69 LSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFV 128
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
D+V M+ + C E +I +E Y F Y ++ S+
Sbjct: 129 PADNVRILMIKS---CRNEGEVKRVIQVLSEIN----TTYDFGY-----------TLYSF 170
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ L + VY+E M+N GI P++F+ N+MIK V +A
Sbjct: 171 STLLIQLGKFDMDGLGRDVYIE--------MLNSGIRPNLFTFNAMIKILCNKGKVQEAE 222
Query: 275 RIFHQMGVVYNY--LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
I MG +++Y P++F+Y LI G C G A E+ D M + G P+S +Y++L+
Sbjct: 223 LI---MGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALI 279
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
+ L G +EE + L EMI+K Y + +C GR+ EA+KLL +++ +
Sbjct: 280 NGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCG 339
Query: 392 IDGYTYTKLLDVLEDD 407
+ TYT L+ L D
Sbjct: 340 PNVQTYTALISGLSRD 355
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 109/260 (41%), Gaps = 42/260 (16%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN II + K+ A+ +F M S N+ PS +YN++ + F + N +
Sbjct: 520 YNAIINGYLTVAKVDDALALFWKMVESGNV---PSSGTYNMMISGF------SKTNRISE 570
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL 287
C +MV G+ P++ + S I G + + A +IFH+M Y+ L
Sbjct: 571 AENFC--GKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSL 628
Query: 288 ----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
PN +Y L+ GLC +GR A +L + MK+KG PS
Sbjct: 629 IDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSE 688
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+ Y +L+ N EVE +K M+ Y+ ++ +C+ +A + +
Sbjct: 689 EIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQT 748
Query: 386 LQNKNL-IDGYTYTKLLDVL 404
+ K+ D +T LLD L
Sbjct: 749 MLKKHWNSDEVVWTVLLDGL 768
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 81/203 (39%), Gaps = 13/203 (6%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P++ +Y L +G+ + L + M G++P +++ G
Sbjct: 649 CEPNVDTYTTLVRGLCGKGRCYEADQ--------LVESMKKKGLQPSEEIYRALLVGQCK 700
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ V AL+IF M V + P Y LI LC + A+ + M +K +
Sbjct: 701 NLEVESALKIFDSM-VTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEV 759
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ L+ L GE + +++ L M + ++F T + E+ G + E ++ K+L
Sbjct: 760 VWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQL 819
Query: 387 QNKNLIDGYTYTKLLDVLEDDFG 409
I + DVL DD
Sbjct: 820 G----IVKEKQKQTADVLRDDIA 838
>gi|225447824|ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 480
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 149/352 (42%), Gaps = 72/352 (20%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG--------T 172
L +F WA+ FRHD STY M + L + ++ ++ M++ P C +
Sbjct: 84 LHIFTWAATIDSFRHDHSTYEWMVKTLAITDRFDDLHSLLQGMVSNPCPCSDGIFSCPRS 143
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E ++ + F +L A F M+ R ++ +PS+ +NIL ++ ++ +
Sbjct: 144 EPIFRFALNAFCRVGRLEDAEIAFASMR--RMIDGKPSVAMHNILINGYVKCREHEKVMT 201
Query: 233 VYMETIR-----------------C----------LFKQMVNDGIEPDIFSLNSMIKGY- 264
VY + I+ C +FK+M + G P++ S N++IKG
Sbjct: 202 VYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCSPNVVSFNTLIKGSF 261
Query: 265 ----------------------------ILSNHVNDALRIFHQMGVVYNY-----LPNSF 291
IL + + R+ ++ ++ LPN F
Sbjct: 262 RERKFEEGVGMAYEMLELGCEFSNVTCEILVDGLCREGRVLEAFDLLIDFSGKGALPNGF 321
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
Y LI LC + A EL D++ RKG PSS + +L+ L G+ EE + + +M
Sbjct: 322 DYFCLIEALCGEENVDRALELLDQLWRKGNAPSSIACTTLIEGLRRFGKTEEAFQLMEKM 381
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ + D +T +L ++C GR+ EA KL +K L DG T+ L++
Sbjct: 382 LREGILPDSVTCNCLLQDLCEVGRSFEANKLRLLASSKGLDSDGMTFNILVN 433
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 22/303 (7%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ +Q DPL LE+FN A + F+H ASTY + +KLG ++EM+ ++++M +
Sbjct: 13 VVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNN 72
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
E Y + + K+ AV F+ M C PS+ S+N + + G +
Sbjct: 73 ALLEGAYIEAMKNYGRKGKVQEAVDTFERMD---FYNCDPSVHSHNAIMNILVEFGYHNQ 129
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+ VYM +M + G++ D+++ IK + + ALR+ M + N
Sbjct: 130 AHKVYM--------RMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPEL-GCDSN 180
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ +Y ++ GL G +AREL DEM + P ++N LV L G V E+ + L
Sbjct: 181 AVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLG 240
Query: 350 EMIEKQRPVDFITYRTVLDEICRRG---------RAGEAMKLLKELQNKNL-IDGYTYTK 399
+++++ + T+ + +CR G R EA + L+++ N D TY
Sbjct: 241 KVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNS 300
Query: 400 LLD 402
++D
Sbjct: 301 IID 303
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 13/259 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F D TY+ + M Q+ + V+ + F E Y ++I F + RA
Sbjct: 291 FEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFK-GFKPDEFTYCSLINGFCKDGDPDRA 349
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ VFK + RPSI YN L +G + + ++ L +M +G P
Sbjct: 350 MAVFK---DGLGKGLRPSIVLYNTLIKGLSQQG-------LILPALQ-LMNEMAENGCLP 398
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+I++ N +I G V+DA + + P+ F+Y+ LI G C Q + +A E+
Sbjct: 399 NIWTYNLVINGLCKMGCVSDASHLVDD-AIAKGCPPDIFTYNTLIDGYCKQLKLDSATEM 457
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+ M +G P +YN+L++ L G+ EE ++ M EK + ITY ++D +C+
Sbjct: 458 VNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCK 517
Query: 373 RGRAGEAMKLLKELQNKNL 391
+ EA+ LL E+++K L
Sbjct: 518 AKKVNEAVDLLGEMKSKGL 536
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 12/216 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
LYNT+I ++ + A+ + M + C P+I +YN++ G + +H
Sbjct: 366 VLYNTLIKGLSQQGLILPALQLMNEMAENG---CLPNIWTYNLVINGLCKMGCVSDASH- 421
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
L + G PDIF+ N++I GY ++ A + ++M P+ +Y
Sbjct: 422 -------LVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWS-QGMTPDVITY 473
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L++GLC G+++ E+ M+ KG P+ +YN +V +L +V E V L EM
Sbjct: 474 NTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKS 533
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
K D +++ T+ C+ G A +L + ++ +
Sbjct: 534 KGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQ 569
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 111/267 (41%), Gaps = 52/267 (19%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVY 234
YNT++ +A K + +FK M+ C P+I +YNI+ + K N ++
Sbjct: 473 YNTLLNGLCKAGKSEEVMEIFKAMEEKG---CTPNIITYNIIVDSLCKAKKVNEAVD--- 526
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---------GVVYN 285
L +M + G++PD+ S ++ G+ ++ A ++F +M YN
Sbjct: 527 ------LLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYN 580
Query: 286 YL--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
+ P++++Y +I G C G + E K
Sbjct: 581 IIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEK 640
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
F+PS ++ +++ L + +V E V + M++K + T T+ E ++ A
Sbjct: 641 RFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPE--TVNTIF-EADKKVVAAPK 697
Query: 380 MKLLKELQNKNLIDGYTYTKLLDVLED 406
+ L+++L K I YTY L D + D
Sbjct: 698 I-LVEDLLKKGHIAYYTYELLYDGIRD 723
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 33/244 (13%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR---------- 224
LYN +I + + +L + K MK S RP+ ++N +F R
Sbjct: 494 LYNNLIDKLSNSNRLEECYLLLKEMKGSG---FRPTQFTHNSIFGCLCRREDVTGALDMV 550
Query: 225 ------GKNTYINHVYMETIRCLFK------------QMVNDGIEPDIFSLNSMIKGYIL 266
G +I H Y ++ L K +MV +G PDI + ++ I G++
Sbjct: 551 REMRVHGHEPWIKH-YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVK 609
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V+ AL IF + Y P+ +Y+ LI+G C R A ++ DEM KG VPS
Sbjct: 610 IKAVDQALEIFRDI-CARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVV 668
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN L+ NG++++ L M+ K+R + ITY T++D +C GR +A+ L E+
Sbjct: 669 TYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEM 728
Query: 387 QNKN 390
+ K
Sbjct: 729 RGKG 732
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 118/290 (40%), Gaps = 54/290 (18%)
Query: 102 FNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD---- 157
+E + NV++ + + FNWAS Q F H+ TY+ M L A+ +
Sbjct: 93 LTHEVVENVLSGLKSWKIAYRFFNWASDQGGFNHNCYTYNAMASCLSHARQNAPLSLLSM 152
Query: 158 DVVNQMLA-TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
D+VN A +P G I + A +F +K R C P+ S+N
Sbjct: 153 DIVNSRCAMSPGALGF------FIRCLGSTGLVEEANLLFDQVKMMR--LCVPNSYSFNC 204
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
L A G ++ + K+M + G EPD ++L S+++ Y S + AL +
Sbjct: 205 LLEAISKSGS--------IDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSV 256
Query: 277 FHQM-------GVVYNYLPNSFS--------------------------YDYLIHGLCAQ 303
F+++ G V + L +FS + LIHG Q
Sbjct: 257 FNEIYGRGWVDGHVLSILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQ 316
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
R A +L +M++ GF P Y++L+ L E+E+ + L EM E
Sbjct: 317 SRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKE 366
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 99 PPRFNNEELCNVMTLQEDPLVCLELFNWA---SKQPRFRHDASTYHIMTRKLGAAKMYQE 155
P +F + + + +ED L++ +P +H Y ++ ++L K E
Sbjct: 525 PTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKH----YTLLVKQLCKRKRSAE 580
Query: 156 MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR---PSIR 212
+ + +M+ F Y+ I F + + + +A+ +F R++ R P +
Sbjct: 581 ACNFLAEMV-REGFLPDIVAYSAAIDGFVKIKAVDQALEIF------RDICARGYCPDVV 633
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN L F + + + + +MV G+ P + + N +I G+ + ++
Sbjct: 634 AYNTLINGFCKVKRVSEAHDI--------LDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQ 685
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A +M V PN +Y LI GLC GR +A L +EM+ KG P+ S+ +L+
Sbjct: 686 AFHCLSRM-VGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALI 744
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L G + + EM E++ P D I Y ++ A ++LKE+ K
Sbjct: 745 HGLCKCGWPDAALLYFREMGERETP-DTIVYVALITSFISNKNPTLAFEILKEMVAKG 801
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 110/275 (40%), Gaps = 45/275 (16%)
Query: 172 TEA---LYNTIIYFFAEARKLSRAVYVFKYMKN---SRNLEC----------RPSIRSYN 215
TEA LYN+++ + + +A Y+ + M + N E RP S++
Sbjct: 402 TEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFS 461
Query: 216 ILFTAFLSRGKNTYINHVYMETIRC---------------------------LFKQMVND 248
I+ + GK ++ + +R L K+M
Sbjct: 462 IVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGS 521
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G P F+ NS+ V AL + +M V + + P Y L+ LC + R+
Sbjct: 522 GFRPTQFTHNSIFGCLCRREDVTGALDMVREMRV-HGHEPWIKHYTLLVKQLCKRKRSAE 580
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A EM R+GF+P +Y++ + V++ ++ ++ + D + Y T+++
Sbjct: 581 ACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLIN 640
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
C+ R EA +L E+ K L+ TY L+D
Sbjct: 641 GFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLID 675
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 45/256 (17%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E + +I+ F ++ +A+ +FK M+ S P + Y+ L ++ + H
Sbjct: 303 EKTFCVLIHGFVRQSRVDKALQLFKKMQKSG---FAPDVSVYDALIGGLCAKKEIEKALH 359
Query: 233 VYMET--------IRCLFKQMVNDGIEPDIFSL-----------------NSMIKGYILS 267
+ E I+ L K + E DI+ L NS++ G +
Sbjct: 360 LLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNG 419
Query: 268 NHVNDALRIFHQMG---------------VVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
V+ A + M V P++ S+ +I GLC G+ A L
Sbjct: 420 KSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSL 479
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ-RPVDFITYRTVLDEIC 371
+M R G + YN+L+ L+ + +EE L EM RP F T+ ++ +C
Sbjct: 480 FRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQF-THNSIFGCLC 538
Query: 372 RRGRAGEAMKLLKELQ 387
RR A+ +++E++
Sbjct: 539 RREDVTGALDMVREMR 554
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGF-VPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ I L + G + A L D++K VP+S S+N L+ A++ +G ++ L EM +
Sbjct: 168 FFIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCD 227
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
D T +VL C + +A+ + E+ + +DG+ + L+
Sbjct: 228 SGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILV 275
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 152/310 (49%), Gaps = 17/310 (5%)
Query: 99 PPRFNNEELCNVMTLQEDPLVCLELFNWASKQ--PRFRHDASTYHIMTRKLGAAKMYQEM 156
P + N + ++ ++D + +F+ A+ + FRHD T+ ++ +L ++
Sbjct: 10 PKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPA 69
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
+ ++ +M TE ++ +I + + A+ VF M+ + RP+ ++Y
Sbjct: 70 EGMLERMKQEKCMV-TEDIFLSICRGYGRVHRPLDAIRVFHKMEG---FQLRPTQKAYLT 125
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH-VNDALR 275
+ + NHV +++M GI + SLN +IK + V+ ALR
Sbjct: 126 ILDILVEE------NHVKRAI--GFYREMRELGIPSSVVSLNILIKALCKNKETVDSALR 177
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
IF +M P+S++Y LI+GLC G A+EL EM++KGF S +Y SL+ L
Sbjct: 178 IFQEMPN-RGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGL 236
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK-NLIDG 394
+ ++E + L EM + TY +++D +C+ G + +AM+LL+ + K +L +
Sbjct: 237 CQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNM 296
Query: 395 YTYTKLLDVL 404
TY+ L++ L
Sbjct: 297 VTYSTLINGL 306
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L ++M + IEP++F+ +S++ G H + A+++ M + +LPN +Y LI+GL
Sbjct: 248 LLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKH-HLPNMVTYSTLINGL 306
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
C + + + A E+ D M+ +G P++ Y ++S L G +E + EM+
Sbjct: 307 CKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMV 358
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 24/266 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D+ TY + L E ++ +M F + Y ++I+ ++ L A+ +
Sbjct: 190 DSYTYGTLINGLCRLGNISEAKELFKEM-EQKGFSASVVTYTSLIHGLCQSNNLDEAIGL 248
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ MK RN + P++ +Y+ L G ++ L + M P++
Sbjct: 249 LEEMK--RN-DIEPNVFTYSSLMDGLCKGGHSSQAMQ--------LLEVMDKKHHLPNMV 297
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +++I G + +A+ I +M + PN+ Y +I GLCA G + A DE
Sbjct: 298 TYSTLINGLCKERKLREAVEILDRMRI-QGLKPNAGLYGKIISGLCAAGSYQEAANFIDE 356
Query: 316 MKRKGFVPSSKSY-------NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
M G P+ S+ N +V L N + + M + V+ T+ ++
Sbjct: 357 MVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVK 416
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDG 394
C+RG +A ++L+E+ ++DG
Sbjct: 417 CFCKRGDLHKAARILEEM----VLDG 438
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 33/244 (13%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR---------- 224
LYN +I + + +L + K MK S RP+ ++N +F R
Sbjct: 454 LYNNLIDKLSNSNRLEECYLLLKEMKGSG---FRPTQFTHNSIFGCLCRREDVTGALDMV 510
Query: 225 ------GKNTYINHVYMETIRCLFK------------QMVNDGIEPDIFSLNSMIKGYIL 266
G +I H Y ++ L K +MV +G PDI + ++ I G++
Sbjct: 511 REMRVHGHEPWIKH-YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVK 569
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V+ AL IF + Y P+ +Y+ LI+G C R A ++ DEM KG VPS
Sbjct: 570 IKAVDQALEIFRDI-CARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVV 628
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN L+ NG++++ L M+ K+R + ITY T++D +C GR +A+ L E+
Sbjct: 629 TYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEM 688
Query: 387 QNKN 390
+ K
Sbjct: 689 RGKG 692
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 99 PPRFNNEELCNVMTLQEDPLVCLELFNWA---SKQPRFRHDASTYHIMTRKLGAAKMYQE 155
P +F + + + +ED L++ +P +H Y ++ ++L K E
Sbjct: 485 PTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKH----YTLLVKQLCKRKRSAE 540
Query: 156 MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR---PSIR 212
+ + +M+ F Y+ I F + + + +A+ +F R++ R P +
Sbjct: 541 ACNFLAEMVRE-GFLPDIVAYSAAIDGFVKIKAVDQALEIF------RDICARGYCPDVV 593
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN L F + + + + +MV G+ P + + N +I G+ + ++
Sbjct: 594 AYNTLINGFCKVKRVSEAHDI--------LDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQ 645
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A +M V PN +Y LI GLC GR +A L +EM+ KG P+ S+ +L+
Sbjct: 646 AFHCLSRM-VGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALI 704
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L G + + EM E++ P D I Y ++ A ++LKE+ K
Sbjct: 705 HGLCKCGWPDAALLYFREMGERETP-DTIVYVALITSFISNKNPTLAFEILKEMVAKG 761
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 109/275 (39%), Gaps = 45/275 (16%)
Query: 172 TEA---LYNTIIYFFAEARKLSRAVYVFKYMKN---SRNLEC----------RPSIRSYN 215
TEA LYN+++ + + +A Y+ M + N E RP S++
Sbjct: 362 TEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFS 421
Query: 216 ILFTAFLSRGKNTYINHVYMETIRC---------------------------LFKQMVND 248
I+ + GK ++ + +R L K+M
Sbjct: 422 IVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGS 481
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G P F+ NS+ V AL + +M V + + P Y L+ LC + R+
Sbjct: 482 GFRPTQFTHNSIFGCLCRREDVTGALDMVREMRV-HGHEPWIKHYTLLVKQLCKRKRSAE 540
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A EM R+GF+P +Y++ + V++ ++ ++ + D + Y T+++
Sbjct: 541 ACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLIN 600
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
C+ R EA +L E+ K L+ TY L+D
Sbjct: 601 GFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLID 635
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 33/152 (21%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-------GVVYNYL 287
++ + K+M + G EPD ++L S+++ Y S + AL +F+++ G V + L
Sbjct: 175 IDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSIL 234
Query: 288 PNSFS--------------------------YDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+FS + LIHG Q R A +L +M++ GF
Sbjct: 235 VLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGF 294
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
P Y++L+ L E+E+ + L EM E
Sbjct: 295 APDVSVYDALIGGLCAKKEIEKALHLLSEMKE 326
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 61/264 (23%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E + +I+ F ++ +A+ +FK M+ S P + Y+ L ++ +
Sbjct: 263 EKTFCVLIHGFVRQSRVDKALQLFKKMQKSG---FAPDVSVYDALIGGLCAKKE------ 313
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSL---------------------------------NS 259
+E L +M GI+PDI L NS
Sbjct: 314 --IEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLEDLDTEAMLLLYNS 371
Query: 260 MIKGYILSNHVNDALRIFHQM-GVVY--NYLPNSF------------SYDYLIHGLCAQG 304
++ G + V+ A + M G Y N+ N F S+ +I GLC G
Sbjct: 372 VLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTG 431
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ-RPVDFITY 363
+ A L +M R G + YN+L+ L+ + +EE L EM RP F T+
Sbjct: 432 KLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQF-TH 490
Query: 364 RTVLDEICRRGRAGEAMKLLKELQ 387
++ +CRR A+ +++E++
Sbjct: 491 NSIFGCLCRREDVTGALDMVREMR 514
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 123/283 (43%), Gaps = 17/283 (6%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FR DA T+ + + L A K + D+V + + YN ++ + + A
Sbjct: 123 FRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEA 182
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M + R P + SYN + F G T + M+ + MV +G+ P
Sbjct: 183 LELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMP 242
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
D + NS++ GY S +A+ +M GV PN +Y L++ LC GR+ A
Sbjct: 243 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE----PNVVTYSSLMNYLCKNGRSTEA 298
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
R++ D M ++G P +Y +L+ G V E+ K M+ D ITY T++D
Sbjct: 299 RKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 358
Query: 370 ICRRGRAGEAMKLLKELQN----------KNLIDGYTYTKLLD 402
C G+ EA KLL + + LI+GY +D
Sbjct: 359 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 401
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 18/239 (7%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSF--CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSR 203
KL A M + M+ V+N M+ C T YN+I++ + + + A+ K M+ S
Sbjct: 219 KLTAQAMDKAME-VLNTMVKNGVMPDCMT---YNSILHGYCSSGQPKEAIGTLKKMR-SD 273
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
+E P++ +Y+ L G++T R +F M G+EPDI + ++++G
Sbjct: 274 GVE--PNVVTYSSLMNYLCKNGRST--------EARKIFDSMTKRGLEPDIATYRTLLQG 323
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ V ++ ++F M V P+ +Y+ LI G C G+ A +L M G P
Sbjct: 324 HCKEGRVIESEKLFDLM-VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 382
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
+Y +L++ +++ + EM+ + ITY +L + R A +L
Sbjct: 383 DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 441
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 13/226 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A Y T++ + ++ + +F M + +P I +YN L GK
Sbjct: 315 ATYRTLLQGHCKEGRVIESEKLFDLMVR---IGVKPDIITYNTLIDGCCLAGK------- 364
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
M+ L MV+ G++PDI + ++I GY + ++DAL +F +M V PN +Y
Sbjct: 365 -MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM-VSSGVSPNIITY 422
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ ++ GL RT A+EL + + G +YN ++ L N +E ++ +
Sbjct: 423 NIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 482
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYT 398
++ T+ ++ + + GR EA L L+ D TY+
Sbjct: 483 TDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYS 528
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 22/236 (9%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
A+ + S A V +Y + +R + P++ +Y IL G+ ++
Sbjct: 62 LADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGR--------LDLGFA 113
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+V G D + ++KG +DA+ I + +P+ FSY+ L+ GL
Sbjct: 114 ALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGL 173
Query: 301 CAQGRTKNARELCDEM---KRKGFVPSSKSYNSLVSALALNG--------EVEETVKNLW 349
C + R++ A EL M + G P SYN++++ G +++ ++ L
Sbjct: 174 CDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLN 233
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
M++ D +TY ++L C G+ EA+ LK++++ + + TY+ L++ L
Sbjct: 234 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 289
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 101/234 (43%), Gaps = 18/234 (7%)
Query: 158 DVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
D ++LA+ G + Y T+I + ++ A+ +FK M +S P+I +Y
Sbjct: 366 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS---GVSPNIITY 422
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
NI+ + +Y+ + G + ++ + N ++ G +N ++AL
Sbjct: 423 NIILQGLFHTRRTAAAKELYV--------SITKSGTQLELSTYNIILHGLCKNNLTDEAL 474
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R+F + + L + +++ +I L GR A++L G VP ++Y+ +
Sbjct: 475 RMFQNLCLTDLQL-ETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 533
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG---RAGEAMKLLKE 385
L G +EE M E D +++ ++ +RG RAG + ++ E
Sbjct: 534 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 587
>gi|22325737|ref|NP_671862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546776|sp|Q84VG6.2|PP160_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g17525, mitochondrial; Flags: Precursor
gi|330251547|gb|AEC06641.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 626
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 18/271 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LE F WAS P F H STY + KL + + + ++++M + +A++ TII
Sbjct: 60 LETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTII 119
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
F AR + R + V + +PS++ +N + + ++ R
Sbjct: 120 RGFGRARLIKRVISVVDLVS---KFGIKPSLKVFNSILDVLVKED---------IDIARE 167
Query: 241 LF-KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
F ++M+ GI D+++ ++KG L+N + D ++ M PN+ Y+ L+H
Sbjct: 168 FFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMK-TSGVAPNAVVYNTLLHA 226
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC G+ AR L EMK P+ ++N L+SA ++ +++ L + D
Sbjct: 227 LCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPD 282
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+T V++ +C GR EA+++L+ +++K
Sbjct: 283 VVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 128/282 (45%), Gaps = 17/282 (6%)
Query: 113 LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT 172
++ED + E F D TY I+ + L + ++ Q++ T
Sbjct: 158 VKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLL-QIMKTSGVAPN 216
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+YNT+++ + K+ RA + MK P+ ++NIL +A Y N
Sbjct: 217 AVVYNTLLHALCKNGKVGRARSLMSEMKE-------PNDVTFNILISA--------YCNE 261
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ L ++ + G PD+ ++ +++ V++AL + ++ + + +
Sbjct: 262 QKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV-DVVA 320
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ L+ G CA G+ + A+ EM+RKG++P+ ++YN L++ G ++ + +M
Sbjct: 321 CNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMK 380
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
+F T+ T++ + GR + +K+L+ +Q+ + + G
Sbjct: 381 TDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHG 422
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 16/235 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTI 179
L+ FN K R + +T++ + R L + ++ M + + G YN +
Sbjct: 373 LDTFN-DMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCV 431
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
IY F + + A+ +++ L R RS+ ++ + +G M+ ++
Sbjct: 432 IYGFYKENRWEDAL---EFLLKMEKLFPRAVDRSFKLI--SLCEKGG--------MDDLK 478
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+ QM+ +G P I + +I Y + ++L + + M V YLP S +++ +I G
Sbjct: 479 TAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDM-VTRGYLPRSSTFNAVIIG 537
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
C Q + N + ++M +G VP ++SYN L+ L + G++++ M+EK
Sbjct: 538 FCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEK 592
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 107/263 (40%), Gaps = 46/263 (17%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
NT++ + K+ A F M+ L P++ +YN+L + G ++
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYL---PNVETYNLLIAGYCDVG--------MLD 370
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------------- 281
+ F M D I + + N++I+G + +D L+I M
Sbjct: 371 SALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNC 430
Query: 282 VVYNY-------------------LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
V+Y + P + + + LC +G + + D+M +G V
Sbjct: 431 VIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGV 490
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
PS + L+ + +G++EE+++ + +M+ + T+ V+ C++ + +K
Sbjct: 491 PSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKF 550
Query: 383 LKELQNKNLI-DGYTYTKLLDVL 404
++++ + + D +Y LL+ L
Sbjct: 551 VEDMAERGCVPDTESYNPLLEEL 573
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 113/258 (43%), Gaps = 15/258 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+ TY+++ M D N M T + A +NT+I + + + +
Sbjct: 352 NVETYNLLIAGYCDVGMLDSALDTFNDM-KTDAIRWNFATFNTLIRGLSIGGRTDDGLKI 410
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV-YMETIRCLFKQMVNDGIEPDI 254
+ M++S + I YN + F +N + + + ++ + LF + V+
Sbjct: 411 LEMMQDSDTVH-GARIDPYNCVIYGFYK--ENRWEDALEFLLKMEKLFPRAVDRS----- 462
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
F L S+ + ++D + QM + +P+ LIH G+ + + EL +
Sbjct: 463 FKLISLCE----KGGMDDLKTAYDQM-IGEGGVPSIIVSHCLIHRYSQHGKIEESLELIN 517
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M +G++P S ++N+++ +V +K + +M E+ D +Y +L+E+C +G
Sbjct: 518 DMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKG 577
Query: 375 RAGEAMKLLKELQNKNLI 392
+A L + K+++
Sbjct: 578 DIQKAWLLFSRMVEKSIV 595
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
Y H +E L MV G P + N++I G+ + V + ++ M +P
Sbjct: 503 YSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAE-RGCVP 561
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV------SALALNGEVE 342
++ SY+ L+ LC +G + A L M K VP ++SL+ +A+ +N ++
Sbjct: 562 DTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQ 621
Query: 343 ETVKN 347
+ +++
Sbjct: 622 DIIQS 626
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 119/228 (52%), Gaps = 14/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I +A+ ++ A +++ M S LE PSI +YN L AF K M
Sbjct: 46 YNILIDGYAKKGRVDEANRLYEEMV-SVGLE--PSIYTYNSLLNAFCKETK--------M 94
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR-IFHQMGVVYNYLPNSFSYD 294
+ LFK M G EPD+ + +++I G + V +AL +FH+M + N+ +Y+
Sbjct: 95 KEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKM-IERGCSANTVAYN 153
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI+GLC + A +L +EM KG+VP + +YN+++S L G+V E + M +
Sbjct: 154 ALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSR 213
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLL 401
D + Y +LD + + G+ EAMKL K++ K + D TY +L
Sbjct: 214 GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSIL 261
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
EC P+ ++ ++ +F +GK + Y LF+QM+++GI PD N +I GY
Sbjct: 3 ECSPNRYTFRVVLKSFCKQGK---LRDGYK-----LFEQMLDNGISPDGIEYNILIDGYA 54
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V++A R++ +M V P+ ++Y+ L++ C + + K A EL M KGF P
Sbjct: 55 KKGRVDEANRLYEEM-VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDV 113
Query: 326 KSYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+Y++++S L G+V E ++ L+ +MIE+ + + Y +++ +C+ A KLL+
Sbjct: 114 VTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLE 173
Query: 385 ELQNKNLI-DGYTYTKLLDVL 404
E+ +K + D TY +L L
Sbjct: 174 EMASKGYVPDNITYNTILSGL 194
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 114/227 (50%), Gaps = 12/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ F + K+ A+ +FK M + E P + +Y+ + + GK T
Sbjct: 81 YNSLLNAFCKETKMKEAMELFKTMA-EKGFE--PDVVTYSTIISGLCKTGKVT------- 130
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + LF +M+ G + + N++I G ++ A ++ +M Y+P++ +Y+
Sbjct: 131 EALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS-KGYVPDNITYNT 189
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC G+ A++ D M +G+ P +YN L+ AL G+ +E +K ++I K
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D +TY ++L + R+ EA ++ K++ +G TY+ +L
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVL 296
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+I+ A + A +FK M S C P+ +Y+I+ + R K H +
Sbjct: 257 YNSILLGLARKSNMDEAEEMFKKMVASG---CAPNGATYSIVLSGH-CRAKKVDDAHKVL 312
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +M G PD+ + N ++ G +N V+ A +F M V P+ SY
Sbjct: 313 E-------EMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM-VDNGCAPDIVSYSV 364
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+++GLC + +AR L D M + VP ++N L+ L G+++E L +M
Sbjct: 365 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSG 424
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D++ Y T+++ + ++GR +A +L + ++ K +
Sbjct: 425 CAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 461
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 31/250 (12%)
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
+A+ + YNTI+ K+S A F M SR P + +YN L A
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMP-SRGYS--PDVVAYNGLLDALYK 231
Query: 224 RGKNTYINHVY---------------------------METIRCLFKQMVNDGIEPDIFS 256
GK ++ M+ +FK+MV G P+ +
Sbjct: 232 EGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGAT 291
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
+ ++ G+ + V+DA ++ +M + +P+ +Y+ L+ GLC A EL M
Sbjct: 292 YSIVLSGHCRAKKVDDAHKVLEEMSKI-GAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
G P SY+ +++ L +V + MIE++ D +T+ ++D +C+ G+
Sbjct: 351 VDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKL 410
Query: 377 GEAMKLLKEL 386
EA LL ++
Sbjct: 411 DEAKDLLDQM 420
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 157/375 (41%), Gaps = 77/375 (20%)
Query: 99 PPR-FNNEELCNVMTLQEDPLVCLELFNWASKQPR-FRHDASTYHIMTRKLGAAKMYQEM 156
PP+ + L +++ LQ DP + L+LF + P+ FR+ +Y ++ KLG ++M+ EM
Sbjct: 3 PPKPISPFRLSSLLRLQNDPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFHEM 62
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSR------------- 203
+ +++Q+ F E ++ +I F+ AR RA+ F+ + R
Sbjct: 63 EQILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSLLN 122
Query: 204 -NLECR-----------------PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
L+C+ P + +YN+L A S G +V F +M
Sbjct: 123 ALLKCKEFEKFDGILSGIDKFATPDVCTYNVLINACCSSGSLGDAWNV--------FDEM 174
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC---- 301
+ + P++ + ++I G + +++A R+ M V+N PN+F Y L+ GLC
Sbjct: 175 LRKHVCPNVVTFGTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNE 234
Query: 302 -------------------------------AQGRTKNARELCDEMKRKGFVPSSKSYNS 330
GR + +EM+ G P + +YN+
Sbjct: 235 LSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNA 294
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
++S + E L EM+ K D I+Y ++ +C+ G+ EA L +++ +
Sbjct: 295 MISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRG 354
Query: 391 LI-DGYTYTKLLDVL 404
D +Y L D L
Sbjct: 355 CTPDVGSYRILFDGL 369
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 9/185 (4%)
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ L A G+ + V++ + ++M +G +PD + N+MI G+ A
Sbjct: 257 YSTLIAALFKVGRK---DEVFV-----VLEEMRENGCKPDTVTYNAMISGFCNEKDFEAA 308
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
+ +M V P+ SY+ +I GLC +G+ + A +L ++M R+G P SY L
Sbjct: 309 YGVLEEM-VAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFD 367
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
L + E L EM+ K + ++ +C+ G K+L L N+ID
Sbjct: 368 GLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLELLCKVLNSLVKGNVID 427
Query: 394 GYTYT 398
G ++
Sbjct: 428 GDAWS 432
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 79/210 (37%), Gaps = 30/210 (14%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLS 190
+ R D+ Y + L E+ V+ +M + C + + YN +I F +
Sbjct: 249 KLRLDSGIYSTLIAALFKVGRKDEVFVVLEEM--RENGCKPDTVTYNAMISGFCNEKDFE 306
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A V + M C+P + SYN++ + GK N LF+ M G
Sbjct: 307 AAYGVLEEMVAKG---CKPDVISYNVIISGLCKEGKWREAND--------LFEDMPRRGC 355
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
PD+ S + G N+A I +M V Y P S S + LC +G N
Sbjct: 356 TPDVGSYRILFDGLCEGMQFNEAAFILDEM-VFKGYAPKSASKTKFVEALCQEG---NLE 411
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
LC K NSLV ++G+
Sbjct: 412 LLC------------KVLNSLVKGNVIDGD 429
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 117/228 (51%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + + + +A+ ++ M L P++ ++ IL + M
Sbjct: 266 YNTMMDGYCKIAHVKKALELYXEMLGDGLL---PNVVTFGILIDGLCKTDE--------M 314
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R M + G+ P+IF N +I GY + ++++AL + H + LP+ F+Y
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSL-HSEIEKHEILPDVFTYSI 373
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC R + A L EMK+KGF+P++ +YN+L+ G +E+ ++ +M EK
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ IT+ T++D C+ G+ AM L E+ K L+ D YT L+D
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 103/221 (46%), Gaps = 10/221 (4%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K V K++ + + P+I YN L + G + L ++
Sbjct: 310 KTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN--------LSEALSLHSEIEK 361
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
I PD+F+ + +IKG + + +A + +M +LPN+ +Y+ LI G C +G +
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK-KGFLPNAVTYNTLIDGYCKEGNME 420
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A E+C +M KG P+ ++++L+ G++E + EM+ K D + Y ++
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
D + G EA +L KE+Q L + +T + L+D L D
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 12/209 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN +I + +A LS A+ + ++ E P + +Y+IL +
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKH---EILPDVFTYSILIKGLCGVDR-------- 383
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME L ++M G P+ + N++I GY ++ A+ + QM PN ++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM-TEKGIEPNIITFS 442
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI G C G+ + A L EM KG +P +Y +L+ +G +E + EM E
Sbjct: 443 TLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ T ++D +C+ GR +A+KL
Sbjct: 503 GLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 136/334 (40%), Gaps = 59/334 (17%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE----MDDVVNQM------------- 163
LELF+ S++ + Y + L AK+Y + M D++ +
Sbjct: 54 LELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSVF 113
Query: 164 -----LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
L + F T ++ +I F+E + A++V+ M + P++++ N++
Sbjct: 114 NVLSRLESSKF--TPNVFGVLIIAFSEMGLVEEALWVYYKM------DVLPAMQACNMVL 165
Query: 219 TAFLSRGKNTYINHVYMETIR-----------------C----------LFKQMVNDGIE 251
+ +G+ + VY + + C LF +M+ I
Sbjct: 166 DGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF 225
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + +I+G + +++A +F M LPN ++Y+ ++ G C K A E
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTM-RNSGMLPNLYTYNTMMDGYCKIAHVKKALE 284
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L EM G +P+ ++ L+ L E+ K L +M + Y ++D C
Sbjct: 285 LYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYC 344
Query: 372 RRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ G EA+ L E++ ++ D +TY+ L+ L
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGL 378
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 43/227 (18%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY I+ + L +E D ++ +M F YNT+I + + + +A+ V
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEM-KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME-TIRCLF------------ 242
M + +E P+I +++ L + GK +Y E I+ L
Sbjct: 426 CSQM-TEKGIE--PNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Query: 243 --------------KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF------HQMGV 282
K+M G+ P++F+L+ +I G ++DA+++F G
Sbjct: 483 HFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGS 542
Query: 283 VYNYL------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
N L PN Y LI GLC GR A + +M+ G P
Sbjct: 543 KTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 15/112 (13%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P+ Y L + G+ + + +RC G+ PD+F+ +I+G+
Sbjct: 552 CSPNHVMYTALIQGLCTDGR-IFKASKFFSDMRC-------SGLRPDVFTCIVIIQGHFR 603
Query: 267 SNHVNDALRI---FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ H+ D + + +MG++ PNS Y L G G K+A C E
Sbjct: 604 AMHLRDVMMLQADILKMGII----PNSSVYRVLAKGYEESGYLKSALSFCGE 651
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 129/274 (47%), Gaps = 19/274 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LEL +++ F D TY + L A ++ D+ +M P T YN++I
Sbjct: 199 LELLGEVTRRG-FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAP----TAITYNSLI 253
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ A + A+ + M + + C P + +Y L +AF G+ ++ Y
Sbjct: 254 GGYCRAGDMDEAIRLLGKMVDDK---CAPDVVTYTTLMSAFCKMGR---LDDAYE----- 302
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF+QMV + + PD+ + S++ G + DAL + ++ P ++Y+ ++ G
Sbjct: 303 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI-TRRGCPPTIYTYNCVVDGY 361
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR--PV 358
C + + A EL + + +GFVP++ +YN LV+ G ++ ++ L ++ + P
Sbjct: 362 CKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPT 421
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
Y +LD +CR GR +A++ +E+ + +
Sbjct: 422 SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYV 455
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 114/289 (39%), Gaps = 45/289 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+A TY + L + E +V M A T YN+II F AR++ A
Sbjct: 108 NAITYSALVDGLCKCERLDEAVALVETM-AERGCAPTVVTYNSIITGFCRARRVDEA--- 163
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFL-SRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+M+ C P I +Y L F SR + L ++ G PDI
Sbjct: 164 HGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLE---------LLGEVTRRGFTPDI 214
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQM-----GVVYNYL---------------------- 287
+ +++I G + + DA+ IF +M + YN L
Sbjct: 215 VTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 274
Query: 288 ----PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
P+ +Y L+ C GR +A EL +M P ++ SLV L G +E+
Sbjct: 275 DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 334
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L E+ + P TY V+D C+ + +A +L+ + +++ +
Sbjct: 335 ALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFV 383
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 118/261 (45%), Gaps = 28/261 (10%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A +Y++M+D P F Y +++ ++AR+L AV V + M ++R++
Sbjct: 24 ALGVYRQMNDA-----HPPDF----LTYTKLVHGLSKARRLRDAVQVLQEMVSARHV--- 71
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + ++ + + ++ R L ++M++ G+ + + ++++ G
Sbjct: 72 PDNTTLTVVVQSLCLGDR--------VDDARELVEEMLHRGMAANAITYSALVDGLCKCE 123
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A+ + M P +Y+ +I G C R A ++M +G P +Y
Sbjct: 124 RLDEAVALVETM-AERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITY 182
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ + +V ++ L E+ + D +TY TV+D +C+ GR +A+ + +E+
Sbjct: 183 TALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSC 242
Query: 389 K-------NLIDGYTYTKLLD 402
+LI GY +D
Sbjct: 243 APTAITYNSLIGGYCRAGDMD 263
>gi|326487712|dbj|BAK05528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 455
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 117/243 (48%), Gaps = 14/243 (5%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
A + ++ D+ N+ L P+ C +YN +I + + A V M+ + RP
Sbjct: 181 ADLIADLRDLRNKYLPAPNTC----VYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRP 236
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN-DGIEPDIFSLNSMIKGYILSN 268
++ +Y+ L GK M+ LF+ M+ D I PD + N +I G+
Sbjct: 237 NLVTYSTLLGGLCRAGK--------MKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLG 288
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V A IF M PN+F+Y LI+G C +G +NA+ + +EM+ G P + SY
Sbjct: 289 QVEKARTIFGFMRK-NECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDAVSY 347
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ L +G V+E + + EM EK D +TY +L+ +C+ GR E M LL L
Sbjct: 348 TALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPE 407
Query: 389 KNL 391
+ +
Sbjct: 408 EGV 410
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R + TY + L A +E ++ M+ + YN II F ++ +A
Sbjct: 235 RPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKAR 294
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F +M+ + EC P+ +Y L +G +E + +F++M + G+EPD
Sbjct: 295 TIFGFMRKN---ECEPNAFNYATLINGHCKKGD--------VENAKLVFEEMRSAGVEPD 343
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
S ++I V++ + + +M + +Y+ L+ GLC GR +L
Sbjct: 344 AVSYTALIGCLCRHGSVDEGIDLVMEMR-EKGCKADVVTYNLLLEGLCKDGRMAEVMDLL 402
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+ +G + SY +++ L +G++E+ V
Sbjct: 403 GRLPEEGVQLNVASYRIVMNTLCSSGDMEKAV 434
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIE----KQRPVDFITYRTVLDEICRRGRAG 377
P++ YN L+ NG+ E + L EM E RP + +TY T+L +CR G+
Sbjct: 197 APNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRP-NLVTYSTLLGGLCRAGKMK 255
Query: 378 EAMKLLKELQNKNLI--DGYTYTKLLD 402
EA +L + + K+ I D TY ++D
Sbjct: 256 EAFELFEGMIEKDHIVPDQLTYNVIID 282
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 151 KMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
++ ++ D ++ L P+ C +YN +I + + L A VF M+ + RPS
Sbjct: 174 ELLADLRDPRSKYLPQPNTC----IYNILIKHYVKKGDLGTAFQVFDEMRKMNCADVRPS 229
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN-DGIEPDIFSLNSMIKGYILSNH 269
+ +Y+ L L RG M+ LF+ M+ D I PD + N +I G+
Sbjct: 230 LVTYSTLIGG-LCRGAQ-------MKEAFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQ 281
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
V A IF M PN+F+Y LI+G C +G + AR + +EM R G P + SY
Sbjct: 282 VEKAQSIFGFMRK-NECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRSGVQPDAVSYT 340
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
SLV L +G V+E + + EM +K D +TY +L+ +C+ R EA+ LL++L ++
Sbjct: 341 SLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAEAVTLLEKLPSE 400
Query: 390 NL 391
+
Sbjct: 401 GV 402
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 115/270 (42%), Gaps = 13/270 (4%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R TY + L +E ++ M+ + YN +I F ++ +A
Sbjct: 227 RPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYNLLIGGFCRLGQVEKAQ 286
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F +M+ + EC P+ +Y L +G+ +E R +F++M+ G++PD
Sbjct: 287 SIFGFMRKN---ECEPNAFNYATLINGHCKKGE--------VEAARGVFEEMIRSGVQPD 335
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
S S++ +V++ + + +M + +Y+ L+ GLC R A L
Sbjct: 336 AVSYTSLVGCLCRHGNVDEGINLVQEMWQ-KGCKADVVTYNLLLEGLCKDRRIAEAVTLL 394
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+++ +G + SY +++ L GE+E+ L M+ + + +L +C
Sbjct: 395 EKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLIGLCDV 454
Query: 374 GRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
GR +A L L + + + + +L++
Sbjct: 455 GRVSDATVTLYGLVDTGFMPEARCWARLIE 484
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 130/274 (47%), Gaps = 22/274 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
+Y+ + L AK + + + M++ S Y+ +I F + +L RA ++K
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + L C P++ +YN + +G+ VY ++M++ G PD+ + +
Sbjct: 183 MID---LNCVPNVTTYNAFLNGLMRKGRIADAQGVY--------EEMISAGCSPDVITYS 231
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I G+ L+ + A +F M + PN+ +Y+ L+HGLC + + A EL +M
Sbjct: 232 TLIHGFSLARKHDQAHELFEAM-ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G P +Y +L+ G++E+ V+ EM+ K D + Y +L R G+ GE
Sbjct: 291 RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 350
Query: 379 AMKLLKELQNKN----------LIDGYTYTKLLD 402
A +L + + ++ +IDG + K LD
Sbjct: 351 ARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLD 384
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 116/232 (50%), Gaps = 16/232 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I+ F+ ARK +A +F+ M SR CRP+ +YN L K +
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMI-SRG--CRPNAVTYNCLLHGLCKESKPDEAHE--- 283
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF++MV G +PD + +++ G+ + A+ +F +M V + P+ +Y+
Sbjct: 284 -----LFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEM-VSKGHDPDVVAYNC 337
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G G+ AR+L M + P + S+N ++ L+ +++ V+ ++E +E+
Sbjct: 338 LLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVE-VFERMEQD 396
Query: 356 RPV--DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +TY +++ +C R EAMK+ KE+ L D + + LL+ +
Sbjct: 397 HGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRA 192
R +A TY+ + L E ++ +M+ C + + Y T++Y F K+ +A
Sbjct: 259 RPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG--CDPDKVTYTTLLYGFCNVGKIEQA 316
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V VF M + + P + +YN L F GK R LF+ MV+ +P
Sbjct: 317 VEVFDEMVSKGH---DPDVVAYNCLLKGFFRAGKPG--------EARQLFQVMVSRECKP 365
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D S N MI G + ++DA+ +F +M + P+ +Y+ LI GLC + R A ++
Sbjct: 366 DTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKV 425
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNG 339
E+ R P ++N L+ A+ G
Sbjct: 426 FKEIDRLKLSPDPHAFNVLLEAMYAAG 452
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%)
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
FS NS++ + V+ A IF M + +P+ SY LI G C A +L
Sbjct: 122 FSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYK 181
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+M VP+ +YN+ ++ L G + + EMI D ITY T++
Sbjct: 182 QMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +S+I+ + V+ AL + M + Y P+ ++ LI+ LC + + A+E
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETM-IKRGYCPDMATHSMLINELCKADKIQEAQEFLQG 109
Query: 316 MKRKGFVPSSK--SYNSLVSALALNGEVEETVKNLWEMIEKQRPV-DFITYRTVLDEICR 372
M R +S SYNSL+++L +V + M+ ++ V D ++Y ++D C+
Sbjct: 110 MNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCK 169
Query: 373 RGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
G A KL K++ + N + TY L+ L
Sbjct: 170 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGL 202
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK---SYNSLVSALALNGEVEETV 345
N+ ++ + GLC G+ + A E C M+ + +S++ L G V+ +
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L MI++ D T+ +++E+C+ + EA + L+ +
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 116/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ +I +A +L A F MK + P+ +YN+L F K ++ Y+
Sbjct: 10 WTIMIDGLCKANRLPEATTYFAKMKKKGTV---PNEWTYNVLINGFCKVHK---VHRAYL 63
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L K+M G+ P++ + +++I G+ V+ A ++F QM V +PN +Y+
Sbjct: 64 -----LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM-VENGCMPNLVTYNT 117
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC G A EL DEM+ +G P SY++L++ L G+++ +K +
Sbjct: 118 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD 177
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
P D + Y T++ +C+ GR EA KL +++ +N D T+T L+D L
Sbjct: 178 CPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGL 227
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 12/214 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T++ + K+ A+ VF+ ++ N +C P + +Y+ L G+ +
Sbjct: 150 YDTLMAGLCKTGKIDMALKVFE---DNSNGDCPPDVVAYSTLIAGLCKTGR--------L 198
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF++M + EPD+ + +++ G + + +A ++ M N PN +Y
Sbjct: 199 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM-EDRNCTPNVITYSS 257
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC G+ ++A+E+ M +G P+ +YNSL+ + V+ + + EM
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
D ITY T++D +C+ GRA EA +L +++ K
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 351
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 118/233 (50%), Gaps = 13/233 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E YN +I F + K+ RA + K MK S P++ +Y+ + F + T ++
Sbjct: 42 EWTYNVLINGFCKVHKVHRAYLLLKEMKESG---LAPNVVTYSTVIHGFC---RQTKVDT 95
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
Y LF+QMV +G P++ + N+++ G + +++A + +M P+ FS
Sbjct: 96 AYK-----LFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM-RERGLQPDKFS 149
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
YD L+ GLC G+ A ++ ++ P +Y++L++ L G ++E K +M
Sbjct: 150 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMR 209
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
E D +T+ ++D +C+ R EA ++L+ ++++N TY+ L+D L
Sbjct: 210 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGL 262
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 14/231 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + + A +F MK C P + +Y+ L F + +
Sbjct: 325 YNTLIDGLCKTGRAPEANRLFGDMKAKF---CNPDVITYSCLIGGFCKLER--------I 373
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R LF M+ + PD+ + +++++GY + V+DA R+ +M V + P+ ++Y
Sbjct: 374 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM-VASDCSPDVYTYTS 432
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C GR AR + M ++G P+ +Y +L+ A G+ K L EM+
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NKNL-IDGYTYTKLLDVL 404
+ ITYR+++ C G EA K+L+ L+ ++N D + Y ++D L
Sbjct: 493 VQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGL 543
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ ++ + +L A V + M++ RN C P++ +Y+ L G+ V
Sbjct: 220 FTALMDGLCKGDRLQEAQQVLETMED-RN--CTPNVITYSSLIDGLCKTGQVRDAQEV-- 274
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
FK+M+ GIEP++ + NS+I G+ ++N V+ AL + +M LP+ +Y+
Sbjct: 275 ------FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM-TATGCLPDIITYNT 327
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC GR A L +MK K P +Y+ L+ ++ +M+++
Sbjct: 328 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 387
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D +T+ T+++ C G +A +LL+E+ + D YTYT L+D
Sbjct: 388 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 435
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 18/267 (6%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIY 181
LF+ KQ D T+ + A + + + ++ +M+A S C + Y +++
Sbjct: 379 LFDDMLKQAVL-PDVVTFSTLVEGYCNAGLVDDAERLLEEMVA--SDCSPDVYTYTSLVD 435
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
F + ++ A V K M C+P++ +Y L AF GK T L
Sbjct: 436 GFCKVGRMVEARRVLKRMAKRG---CQPNVVTYTALIDAFCRAGKPTVAYK--------L 484
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
++MV +G++P++ + S+I G+ + + +A ++ ++ N + F+Y ++ GLC
Sbjct: 485 LEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLC 544
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI--EKQRPVD 359
GR A EL + +K+ G P Y +L+ L E+ + ++ L EM K RP +
Sbjct: 545 RTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRP-N 603
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKEL 386
Y V+ E+ R GR EA L EL
Sbjct: 604 AEAYEAVIQELAREGRHEEANALADEL 630
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 22/240 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I + +L A +F+ M+ + C P + ++ L L +G +
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMREN---SCEPDVVTFTALMDG-LCKGDRLQEAQQVL 240
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
ET M + P++ + +S+I G + V DA +F +M +V PN +Y+
Sbjct: 241 ET-------MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM-IVRGIEPNVVTYNS 292
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHG C +A L +EM G +P +YN+L+ L G E + +M K
Sbjct: 293 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 352
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK----------NLIDGYTYTKLLDVLE 405
D ITY ++ C+ R A L ++ + L++GY L+D E
Sbjct: 353 CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAE 412
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
N ++ +I GLC R A +MK+KG VP+ +YN L++ +V L
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
EM E + +TY TV+ CR+ + A KL +++ +N + + TY LL L
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 153/340 (45%), Gaps = 23/340 (6%)
Query: 66 LSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFN 125
L R R +G RS + K + Q R + L P ++C V+ Q+D V L+ F
Sbjct: 146 LVREIGRLIGLRSSWNPK---HEGQMRNLLRSLKP----SQVCAVLRSQDDERVALKFFY 198
Query: 126 WASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
WA +Q R+RHD Y+ M L KM Q V+ M + EA ++ ++
Sbjct: 199 WADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVS-YSR 257
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
A +L A+ V M+ + P++ N F+ + +E ++M
Sbjct: 258 AGQLRDALKVLTLMQRA---GVEPNLLICNTTIDVFVRANR--------LEKALRFLERM 306
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
GI P++ + N MI+GY + V +A+ + M LP+ SY ++ LC + R
Sbjct: 307 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMP-SKGCLPDKVSYYTIMGYLCKEKR 365
Query: 306 TKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R+L +M K G V +YN+L+ L + +E + L + EK +D + Y
Sbjct: 366 IVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYS 425
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLD 402
++ +C+ GR EA L+ E+ +K D TYT +++
Sbjct: 426 AIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVN 465
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 117/268 (43%), Gaps = 20/268 (7%)
Query: 128 SKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEAR 187
+++ FR D Y + L E D++N+ML+ Y ++ F
Sbjct: 412 AEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 471
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
++ +A + + M +P+ SY L GK+ +E ++M+N
Sbjct: 472 EVDKAKKLLQIMHTHGY---KPNTVSYTALLNGLCRTGKS-------LEA-----REMMN 516
Query: 248 DGIE----PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
E P+ + + ++ G +++A + +M V+ + P + L+ LC
Sbjct: 517 MSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREM-VLKGFFPGPVEINLLLQSLCRD 575
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
GRT AR+ +E KG + ++ +++ N E++ + L +M + D TY
Sbjct: 576 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 635
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL 391
T++D + ++GR EA +L+K++ +K +
Sbjct: 636 TTLVDALGKKGRIAEATELMKKMLHKGI 663
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 139/334 (41%), Gaps = 48/334 (14%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
+C V+ Q D V L F WA +Q R+ H Y+ M L K+ Q V+ M
Sbjct: 170 VCAVLRSQADERVALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRR 229
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
C EA + ++ ++ A KL A+ V M+ + PS+ N + GK
Sbjct: 230 GIECPPEA-FGYVMVSYSRAGKLRNALRVLTLMQKA---GVEPSLSICNTTIYVLVKGGK 285
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI---------- 276
+E ++M GI+PDI + NS+IKGY N + DAL +
Sbjct: 286 --------LEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCP 337
Query: 277 ------FHQMGVV-------------------YNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+ MG + N +P+ +Y+ LIH L G +A
Sbjct: 338 PDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALA 397
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
E + KGF Y+++V + G ++E + +M + D +TY ++D C
Sbjct: 398 FLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFC 457
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
R GR EA K+L+++ + +YT LL+ L
Sbjct: 458 RLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGL 491
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 50/306 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +Y+ + L K +E+ ++ +M+ + + YNT+I+ + K A
Sbjct: 339 DKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLS---KHGHADDA 395
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
++K +++ Y+ + +F +G+ M+ + L M + G PD+
Sbjct: 396 LAFLKEAQDKGFHIDKVGYSAIVHSFCQKGR--------MDEAKSLVIDMYSRGCNPDVV 447
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL--- 312
+ +++ G+ +++A +I QM + PN+ SY L++GLC G++ ARE+
Sbjct: 448 TYTAIVDGFCRLGRIDEAKKILQQM-YKHGCKPNTVSYTALLNGLCHSGKSLEAREMINV 506
Query: 313 -----------------------------CD---EMKRKGFVPSSKSYNSLVSALALNGE 340
CD EM KGF P+ N L+ +L N +
Sbjct: 507 SEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQK 566
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE--LQNKNLIDGYTYT 398
V E K L E + K ++ + + TV+ C+ G A+ +L + L K+ D TYT
Sbjct: 567 VVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKH-PDAVTYT 625
Query: 399 KLLDVL 404
L D L
Sbjct: 626 ALFDAL 631
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 106/265 (40%), Gaps = 39/265 (14%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
Y I+ F ++ A + + M C+P+ SY L GK
Sbjct: 449 YTAIVDGFCRLGRIDEAKKILQQMYKH---GCKPNTVSYTALLNGLCHSGKSLEAREMIN 505
Query: 227 ---------NTYINHVYMETIR--------C-LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
N M +R C L ++MV G P +N +I+ +
Sbjct: 506 VSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 565
Query: 269 HVNDALRIFHQ---MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V +A + + G N + ++ +IHG C G + A + D+M G P +
Sbjct: 566 KVVEAKKYLEECLNKGCAINVV----NFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDA 621
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L AL G ++E + + +M+ K +TYR+V+ + GR + + LL++
Sbjct: 622 VTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEK 681
Query: 386 LQNKNLIDGYTYTKLLDVLEDDFGN 410
+ + Y ++++ L DFGN
Sbjct: 682 MLKRQPFR-TVYNQVIEKL-CDFGN 704
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 107/270 (39%), Gaps = 16/270 (5%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
E+ N S++ + +A TY + L E D+ +M+ F T N +I
Sbjct: 502 EMIN-VSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEK-GFFPTPVEINLLIQ 559
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ +K+ A KY++ N C ++ ++ + F G ME +
Sbjct: 560 SLCQNQKVVEAK---KYLEECLNKGCAINVVNFTTVIHGFCQIGD--------MEAALSV 608
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
M G PD + ++ +++A + +M + P +Y +IH
Sbjct: 609 LDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKM-LSKGLDPTPVTYRSVIHRYS 667
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
GR + L ++M ++ P YN ++ L G +EE K L +++ VD
Sbjct: 668 QWGRVDDMLNLLEKMLKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDAN 725
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
T +++ ++G A A K+ + +NL
Sbjct: 726 TCHVLMESYLKKGVAISAYKVACRMFRRNL 755
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 137/296 (46%), Gaps = 34/296 (11%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
++ L+EDP + + F W+ + F+H +Y I+ L A+MY + + V+ +M+ + +
Sbjct: 115 LVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKAD 174
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
C VF + ++RN+ C P ++ LF+ + G
Sbjct: 175 CD-----------------------VFDVLWSTRNV-CVPGFGVFDALFSVLIDLG---- 206
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+ E I+C F +M + P S N ++ + +D R F M + P
Sbjct: 207 ---MLEEAIQC-FSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM-IGAGARPT 261
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
F+Y+ +I +C +G + AR L +EMK +G VP + +YNS++ G +++TV
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
EM + D ITY +++ C+ G+ ++ +E++ L + +Y+ L+D
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 125/322 (38%), Gaps = 49/322 (15%)
Query: 129 KQPRFRH---DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL--YNTIIYFF 183
++ +FR D TY+ M G +DD V C + YN +I F
Sbjct: 286 EEMKFRGLVPDTVTYNSMIDGFGKVG---RLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 184 AEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC--- 240
+ KL + ++ MK + +P++ SY+ L AF G Y++ R
Sbjct: 343 CKFGKLPIGLEFYREMKGNG---LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 241 ------------------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
L +M+ G+E ++ + ++I G + + +A +
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F +M +PN SY+ LIHG A EL +E+K +G P Y + + L
Sbjct: 460 FGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN------ 390
++E + EM E + + Y T++D + G E + LL E++ +
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 391 ----LIDGYTYTKLLDVLEDDF 408
LIDG KL+ D F
Sbjct: 579 TFCVLIDGLCKNKLVSKAVDYF 600
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLI 297
LF +M G+ P++ S N++I G++ + +++ AL + +++ G+ P+ Y I
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK----PDLLLYGTFI 514
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GLC+ + + A+ + +EMK G +S Y +L+ A +G E + L EM E
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
V +T+ ++D +C+ +A+ + N
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 15/219 (6%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS--YNILFTAFLSRGKNTYINH 232
LY T I+ K+ A V MK EC S Y L A+ G T H
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMK-----ECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
L +M IE + + +I G + V+ A+ F+++ + N+
Sbjct: 564 --------LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ +I GLC + + A L ++M +KG VP +Y SL+ G V E + +M
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
E +D + Y +++ + + +A L+E+ + +
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 21/276 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYN 177
LEL N K + D Y L + + + V+N+M CG +A +Y
Sbjct: 492 LELLN-ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE----CGIKANSLIYT 546
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T++ + ++ + +++ MK L+ ++ ++ +L KN ++
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKE---LDIEVTVVTFCVLIDGLC---KNKLVSKAVD-- 598
Query: 238 IRCLFKQMVND-GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
F ++ ND G++ + +MI G N V A +F QM V +P+ +Y L
Sbjct: 599 ---YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM-VQKGLVPDRTAYTSL 654
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ G QG A L D+M G +Y SLV L+ ++++ L EMI +
Sbjct: 655 MDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D + +VL + G EA++L L L+
Sbjct: 715 HPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750
>gi|242095134|ref|XP_002438057.1| hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
gi|241916280|gb|EER89424.1| hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
Length = 499
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 117/237 (49%), Gaps = 14/237 (5%)
Query: 151 KMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
++ ++ D N+ L P+ C +YN +I F +L A V M+ + +P+
Sbjct: 167 ELLSDLRDPRNKYLPRPNTC----VYNILIKHFVRIGELETAFKVLDEMREYTCADVKPN 222
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN-DGIEPDIFSLNSMIKGYILSNH 269
+ +Y+ L GK ME LF++M+ D I PD N +I G+
Sbjct: 223 LVTYSTLIAGLCRGGK-------MMEAFE-LFEEMIEKDRIVPDQLLYNVIIDGFCRLGQ 274
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
V+ A IF M + PN+F+Y LI+G C + + AR + +EM+ G P + SY
Sbjct: 275 VDKARAIFGFMKK-NDCEPNAFNYATLINGHCKKADIEAARSVFEEMRNAGVEPDAVSYT 333
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+L+ L +G V+E + + EM +K D +TY V++ +CR GR EAM LL+ +
Sbjct: 334 ALIGCLCRHGSVDEAINLVLEMKQKGCRADVVTYNLVIEGLCRDGRTVEAMDLLESV 390
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 13/267 (4%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + L E ++ +M+ + LYN II F ++ +A +F +
Sbjct: 225 TYSTLIAGLCRGGKMMEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIFGF 284
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
MK + +C P+ +Y L N + +E R +F++M N G+EPD S
Sbjct: 285 MKKN---DCEPNAFNYATLI--------NGHCKKADIEAARSVFEEMRNAGVEPDAVSYT 333
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I V++A+ + +M + +Y+ +I GLC GRT A +L + +
Sbjct: 334 ALIGCLCRHGSVDEAINLVLEMKQ-KGCRADVVTYNLVIEGLCRDGRTVEAMDLLESVPL 392
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G + SY L++ L GE+++ V L M+ + + +L +C GR +
Sbjct: 393 EGVKLNVASYRILMNCLCSRGEMDKAVGLLGLMLGRGFLPHYAASNNLLIGLCDAGRIAD 452
Query: 379 AMKLLKELQNKNLI-DGYTYTKLLDVL 404
A L L + + + + +L++ +
Sbjct: 453 ATMALYGLADAGFMPEARCWERLVETM 479
>gi|326497659|dbj|BAK05919.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 523
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 117/243 (48%), Gaps = 14/243 (5%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
A + ++ D+ N+ L P+ C +YN +I + + A V M+ + RP
Sbjct: 190 ADLIADLRDLRNKYLPAPNTC----VYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRP 245
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN-DGIEPDIFSLNSMIKGYILSN 268
++ +Y+ L GK M+ LF+ M+ D I PD + N +I G+
Sbjct: 246 NLVTYSTLLGGLCRAGK--------MKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLG 297
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V A IF M PN+F+Y LI+G C +G +NA+ + +EM+ G P + SY
Sbjct: 298 QVEKARTIFGFMRK-NECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAGVEPDAVSY 356
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ L +G V+E + + EM EK D +TY +L+ +C+ GR E M LL L
Sbjct: 357 TALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPE 416
Query: 389 KNL 391
+ +
Sbjct: 417 EGV 419
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 117/275 (42%), Gaps = 13/275 (4%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R + TY + L A +E ++ M+ + YN II F ++ +A
Sbjct: 244 RPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKAR 303
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F +M+ + EC P+ +Y L +G +E + +F++M + G+EPD
Sbjct: 304 TIFGFMRKN---ECEPNAFNYATLINGHCKKGD--------VENAKLVFEEMRSAGVEPD 352
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
S ++I V++ + + +M + +Y+ L+ GLC GR +L
Sbjct: 353 AVSYTALIGCLCRHGSVDEGIDLVMEMRE-KGCKADVVTYNLLLEGLCKDGRMAEVMDLL 411
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+ +G + SY +++ L +G++E+ V L M+ + + +L +C
Sbjct: 412 GRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLGRGFLPHYAASNKLLIGLCDV 471
Query: 374 GRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLEDD 407
GR +A L L + + + KL++ + D
Sbjct: 472 GRVADATAALYGLAKFGFMPEASCWAKLIEAVCRD 506
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIE----KQRPVDFITYRTVLDEICRRGRAGE 378
P++ YN L+ NG+ E + L EM E RP + +TY T+L +CR G+ E
Sbjct: 207 PNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRP-NLVTYSTLLGGLCRAGKMKE 265
Query: 379 AMKLLKELQNKNLI--DGYTYTKLLD 402
A +L + + K+ I D TY ++D
Sbjct: 266 AFELFEGMIEKDHIVPDQLTYNVIID 291
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 133/278 (47%), Gaps = 13/278 (4%)
Query: 126 WASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
W S +TY+IMT+ L + M E +++ Q+ S + + T+I+ E
Sbjct: 357 WDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCE 416
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
+RA F+ ++++RN + SY+ + F G+ N VY K M
Sbjct: 417 NGYANRA---FEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVY--------KNM 465
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
V DG +P+ N++I G+ + +NDA++I+ +M P +Y+ LI GLC +
Sbjct: 466 VKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEM-TSNGCCPTIITYNTLIDGLCKAEK 524
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
+ A L EM +GF P ++Y SL+ L + +V+ ++ E+++ VD + +
Sbjct: 525 YQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNI 584
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
++ +C G+ EA + E++ KN TY L+D
Sbjct: 585 LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMD 622
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 31/268 (11%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTI 179
L++F+++S RF D T+ A ++Y+ M C + +YN +
Sbjct: 437 LDVFSYSSMINRFCKDGRTHD-------ANEVYKNM---------VKDGCKPNSHVYNAL 480
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
I F K++ A+ ++ M ++ C P+I +YN L K Y E
Sbjct: 481 INGFCRVSKINDAIKIYIEMTSN---GCCPTIITYNTLIDGLCKAEK-------YQEA-S 529
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
L K+M+ G +PDI + S+I+G V+ ALRI+ ++ + + ++ LIHG
Sbjct: 530 SLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEI-LDAGLQVDVMVHNILIHG 588
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI-EKQRPV 358
LC+ G+ A + EMK K P+ +YN+L+ G +++ +LW I +
Sbjct: 589 LCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAA-SLWTAILDNGLKP 647
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKEL 386
D +TY T + +C R E + LL E+
Sbjct: 648 DIVTYNTRIKGLCSCNRTPEGVLLLNEV 675
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 114/275 (41%), Gaps = 30/275 (10%)
Query: 136 DASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
D TY I+ L AA++Y +M ++YN++I F E +
Sbjct: 298 DTVTYGILIHGLCRSGDVDSAARVYSDM--------VKAGLVLDVSVYNSLIKGFCEVGR 349
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
A +K+ +S I +YNI+ L G + L KQ+ ND
Sbjct: 350 TGEA---WKFW-DSTGFSGIRQITTYNIMTKGLLDSGMVSEATE--------LLKQLEND 397
Query: 249 G-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
PD + ++I G + + N A I L + FSY +I+ C GRT
Sbjct: 398 ASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEEL-DVFSYSSMINRFCKDGRTH 456
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A E+ M + G P+S YN+L++ ++ + +K EM ITY T++
Sbjct: 457 DANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLI 516
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D +C+ + EA L KE+ + D TY L+
Sbjct: 517 DGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLI 551
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 112/276 (40%), Gaps = 44/276 (15%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSR-NLECRPSIRSYNILFTAFLSRG--------- 225
+NT++ F AR+ S A F + + P++++YNI+ + +RG
Sbjct: 122 HNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLF 181
Query: 226 -----------KNTY-------INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+ TY H ++ L +M N G++ D N+++ G +
Sbjct: 182 SSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRT 241
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
A++++ Q+ PN +Y ++ GLC GR K A E+ M + +
Sbjct: 242 GMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVT 301
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE-- 385
Y L+ L +G+V+ + +M++ +D Y +++ C GR GEA K
Sbjct: 302 YGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTG 361
Query: 386 -----------LQNKNLIDGYTY---TKLLDVLEDD 407
+ K L+D T+LL LE+D
Sbjct: 362 FSGIRQITTYNIMTKGLLDSGMVSEATELLKQLEND 397
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 19/241 (7%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
P F + AL ++ F+ A A+ F+ + + L C P +RS+N L AF+ +
Sbjct: 79 PRFSESAAL--VVLSAFSRALMPDAALAAFRDLPSL--LGCNPGVRSHNTLLDAFVRARR 134
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV 283
+ + + F + I P++ + N +++ V+ A+ +F + GV
Sbjct: 135 YSDADAFFASLSHGAFGRR----IAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVA 190
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
P+ +Y L+ GL + NA +L DEM G + YN+L+S G E+
Sbjct: 191 ----PDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEK 246
Query: 344 TVKNLWEMIEKQRPV--DFITYRTVLDEICRRGRAGEAMKLL-KELQNKNLIDGYTYTKL 400
+K +WE + + + TY+ +LD +C+ GR EA ++ + + N + D TY L
Sbjct: 247 AMK-VWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGIL 305
Query: 401 L 401
+
Sbjct: 306 I 306
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 156/340 (45%), Gaps = 44/340 (12%)
Query: 91 FRCAVSELPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRFRHDASTYHIM------ 143
F AV+E P+ L V+ T++ P+V L F WA +Q F+ +Y ++
Sbjct: 40 FHAAVAE--PKL----LVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILAR 93
Query: 144 ----------TRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
K+ + KM + DVV+ + S + + + +++ + + L + +
Sbjct: 94 NGLMRSAYCVMEKVVSVKMENGVIDVVSS--SEVSMPSVKLILDLLLWIYVKKSLLEKCL 151
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
VF M + L P +++ N + R N ++ R ++ MV GI P
Sbjct: 152 LVFYKMVSKGLL---PDVKNCNRVLRLLRDRDNN-------IDVAREVYNVMVECGICPT 201
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + N+M+ + V +AL++ QM + PN +Y+ L++GL G + A+EL
Sbjct: 202 VVTYNTMLDSFCKKGMVQEALQLLFQMQAM-GCSPNDVTYNVLVNGLSHSGEMEQAKELI 260
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+M R G S +Y+ L+ G++EE + EM+ + +TY T++ +C+
Sbjct: 261 QDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKW 320
Query: 374 GRAGEAMKLLKELQNKNLIDG--------YTYTKLLDVLE 405
GR +A KLL + NKNL+ Y YT+L ++ E
Sbjct: 321 GRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGE 360
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 12/219 (5%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
C T YNT++ F + + A+ + M+ + C P+ +YN+L G+
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQA---MGCSPNDVTYNVLVNGLSHSGE- 252
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
ME + L + M+ G+E +++ + +I+GY + +A R+ +M + +
Sbjct: 253 -------MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM-LSRGAV 304
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P +Y+ +++GLC GR +AR+L D M K +P SYN+L+ G + E
Sbjct: 305 PTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 364
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
E+ + +TY T++D +CR G AM+L E+
Sbjct: 365 FAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEM 403
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 16/265 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + R +E + +ML+ + T YNTI+Y + ++S A +
Sbjct: 274 TYDPLIRGYCEKGQIEEASRLGEEMLSRGA-VPTVVTYNTIMYGLCKWGRVSDARKLLDV 332
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M N +NL P + SYN L + G I ++ LF ++ + P + + N
Sbjct: 333 MVN-KNL--MPDLVSYNTLIYGYTRLGN---IGEAFL-----LFAELRYRSLAPSVVTYN 381
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I G ++ A+R+ +M + + P+ F++ + G C G A+EL DEM
Sbjct: 382 TLIDGLCRLGDLDVAMRLKDEM-IKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLN 440
Query: 319 KGFVPSSKSY-NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
+G P +Y +V L L G+ + EM+ + P D ITY +D + + G
Sbjct: 441 RGLQPDRFAYITRIVGELKL-GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 499
Query: 378 EAMKLLKELQNKNLI-DGYTYTKLL 401
EA +L+K++ L+ D TYT ++
Sbjct: 500 EASELVKKMLYNGLVPDHVTYTSII 524
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLC 301
++M+ G PD+ + N I G ++ +A + +M +YN L P+ +Y +IH
Sbjct: 471 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKM--LYNGLVPDHVTYTSIIHAHL 528
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G + AR L EM KG PS +Y L+ + A+ G ++ + + +EM EK + I
Sbjct: 529 MAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVI 588
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
TY +++ +C+ + +A E+Q K + + YTYT L++
Sbjct: 589 TYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILIN 630
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + +YN+ G ++ L K+M+ +G+ PD + S+I ++++
Sbjct: 480 PDLITYNVFIDGLHKLGN--------LKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAG 531
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
H+ A +F +M + P+ +Y LIH +GR K A EM KG P+ +Y
Sbjct: 532 HLRKARALFLEM-LSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 590
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L++ L ++++ EM K + TY +++E C G EA++L K++ +
Sbjct: 591 NALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 650
Query: 389 KNL-IDGYTYTKLLDVLEDDFGNSIRHHL 416
+ + D T+ LL L D+ + HL
Sbjct: 651 REIQPDSCTHRSLLKHLNKDYKLHVVRHL 679
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+IY + + A +F ++ R+L PS+ +YN L G +
Sbjct: 345 YNTLIYGYTRLGNIGEAFLLFAELR-YRSLA--PSVVTYNTLIDGLCRLGD--------L 393
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L +M+ G +PD+F+ + ++G+ ++ A +F +M + P+ F+Y
Sbjct: 394 DVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEM-LNRGLQPDRFAYIT 452
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
I G G A + +EM +GF P +YN + L G ++E + + +M+
Sbjct: 453 RIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG 512
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
D +TY +++ G +A L E+ +K + TYT L+
Sbjct: 513 LVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLI 559
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 39/348 (11%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
D + + L + N +C+V+ Q+D + F WA +Q + H TY +M ++L
Sbjct: 133 DAEMGKQLERLKFKLNPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRL 192
Query: 148 GAAKMYQEMDDVVNQMLATPSFCG---TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
A QE D VV Q+L G + L +++ F +S A+ +F MK +
Sbjct: 193 AGA---QETDAVV-QILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMK---S 245
Query: 205 LECRPSIRSYNILF----------TAFLSRGK-NTYINHVYMETIRCL------------ 241
C PS YN + +A + GK + +T R
Sbjct: 246 FGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDP 305
Query: 242 ----FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
++M+ GI+P + + +I + S ++++A + F+ M + PN +Y L+
Sbjct: 306 AAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNL-RCSPNVVTYTTLV 364
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
+GL GR + A E+ EMK P + +YN+L+ L GE + EM ++
Sbjct: 365 NGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLV 424
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ TY ++ + + GR EA +L +L+ + + D +TY L+DVL
Sbjct: 425 PNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 122/261 (46%), Gaps = 32/261 (12%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T Y T++ +A +L AV + + M+ C PS+ +Y+ L +F R +
Sbjct: 562 TVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG---CEPSVVTYSSLMASFYKRDQEEESL 618
Query: 232 HVYMETIR---------------CL------------FKQMVNDGIEPDIFSLNSMIKGY 264
++ E +R CL F +M +G+EP + + +++
Sbjct: 619 SLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSL 678
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ ++ AL+IF+++ + +P++F Y+ +++GL R A +L D MK + +P
Sbjct: 679 VKDEKIDFALQIFNEL-QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPD 737
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+Y SL+ L +G +EE +M E+ D + Y +++D + + G+ A+ + +
Sbjct: 738 LFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFR 797
Query: 385 ELQNKNLI-DGYTYTKLLDVL 404
+ K + D TY+ L+D L
Sbjct: 798 AMAKKRCVPDVVTYSSLIDSL 818
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 21/234 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +++ + KLS A+ +F+ M R C P + +Y+ L S GK + Y
Sbjct: 776 YTSLMDVLGKGGKLSHALIIFRAMAKKR---CVPDVVTYSSLID---SLGKEGRVEEAYY 829
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F+ ++ G P++ +S+I + V+ AL +F +M PN +Y+
Sbjct: 830 -----FFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEM-QRRQCPPNIVTYNN 883
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GL GR A +L +EM++ G VP +YN L+ + G V+E M EK
Sbjct: 884 LLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG 943
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-----TYTKLLDVL 404
D IT+ ++++ + + + EA +L ++ +GY TY L+D+L
Sbjct: 944 IVPDVITFTSLIESLGKVDKLLEACELFDSMEE----EGYNPSVVTYNVLIDIL 993
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN ++ ++ ++ A + MKN L P + +Y L G+
Sbjct: 705 VYNIMVNGLVKSNRVDEACKLVDSMKNQNIL---PDLFTYTSLLDGLGKSGR-------- 753
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E +F +M +G EPD+ + S++ ++ AL IF M +P+ +Y
Sbjct: 754 LEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAM-AKKRCVPDVVTYS 812
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI L +GR + A + KG P+ Y+SL+ + G V+ ++ EM +
Sbjct: 813 SLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRR 872
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
Q P + +TY +L + + GR A KLL+E++ + D TY L+D
Sbjct: 873 QCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILID 921
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 22/303 (7%)
Query: 122 ELFNWASKQPRFRH--DASTYHIMTRKLG-AAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
E FN +K H D Y + LG K+ + ++ + +A Y++
Sbjct: 756 EAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHAL--IIFRAMAKKRCVPDVVTYSS 813
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
+I + ++ A Y F+ NS + C P++ Y+ L +F GK ++
Sbjct: 814 LIDSLGKEGRVEEAYYFFE---NSISKGCTPNVGVYSSLIDSF---GKKGMVDRALE--- 864
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
LF++M P+I + N+++ G + +N A ++ +M V +P+ +Y+ LI
Sbjct: 865 --LFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKV-GCVPDLVTYNILID 921
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G+ G A MK KG VP ++ SL+ +L ++ E + M E+
Sbjct: 922 GVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNP 981
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYT---YTKLLDVLEDDFGNSIRH 414
+TY ++D + R G+ EA + E++ K + DG T ++L V E F +++
Sbjct: 982 SVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQF-HALEE 1040
Query: 415 HLR 417
LR
Sbjct: 1041 GLR 1043
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 130/311 (41%), Gaps = 23/311 (7%)
Query: 99 PPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE--- 155
P N + L + + E L++FN ++ D Y+IM L + E
Sbjct: 666 PLLGNYKTLLSSLVKDEKIDFALQIFNEL-QESSLVPDTFVYNIMVNGLVKSNRVDEACK 724
Query: 156 -MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
+D + NQ + F Y +++ ++ +L A +F M + P + +Y
Sbjct: 725 LVDSMKNQNILPDLFT-----YTSLLDGLGKSGRLEEAFNMFTKMTEEGH---EPDVVAY 776
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
L GK ++H + +F+ M PD+ + +S+I V +A
Sbjct: 777 TSLMDVL---GKGGKLSHALI-----IFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
F + PN Y LI +G A EL +EM+R+ P+ +YN+L+S
Sbjct: 829 YFFEN-SISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSG 887
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-D 393
LA G + K L EM + D +TY ++D + + G EA K ++ K ++ D
Sbjct: 888 LAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPD 947
Query: 394 GYTYTKLLDVL 404
T+T L++ L
Sbjct: 948 VITFTSLIESL 958
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 140/329 (42%), Gaps = 66/329 (20%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTII 180
+ FN K R + TY + L A +E +V +M + C +A+ YNT+I
Sbjct: 343 KFFN-GMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEM--KENNCSPDAIAYNTLI 399
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------------- 226
+A + A +FK MK+ R L P++R+YNI+ + G+
Sbjct: 400 DGLGKAGEADMACGLFKEMKD-RGL--VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQ 456
Query: 227 ---------NTYINHV----YMETIRCLFKQMVNDGIE---------------------- 251
NT I+ + M+ + + K+MV G E
Sbjct: 457 GAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTV 516
Query: 252 --PDI-------FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
P + + N+++ +I + HV++A+++ M + +P +Y L+ GL
Sbjct: 517 EYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKK-HECIPTVVTYTTLVDGLGK 575
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
GR A L EM+++G PS +Y+SL+++ + EE++ EM+ K D T
Sbjct: 576 AGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVST 635
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNL 391
Y V++ +C+ +A+ + ++ + +
Sbjct: 636 YSLVINCLCKSDDVDQALDVFGRMKEEGM 664
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ EDP V F WA +P F+H+A T ++ AK ++E ++ + L F
Sbjct: 49 VLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCF 108
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKN---------------------------- 201
E +Y T+I F +A ++ +A + MK
Sbjct: 109 -PNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALE 167
Query: 202 ---SRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM-----VNDGIEPD 253
S EC P++ +YN + K I+ LF M + G EPD
Sbjct: 168 QFKSMGEECSPNVITYNTVVNGLC---KANRIDEALE-----LFDDMEKRYEASHGCEPD 219
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ S +++I + V+ A F +M V PN +Y LI GLC R EL
Sbjct: 220 VISYSTVIDALCKAQRVDKAYEYFKRMRAV-GCAPNVVTYSSLIDGLCKVDRPSECLELL 278
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
MK KGF + +N+++ AL N E E+ + +++ + + +TY + +C+
Sbjct: 279 LHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKA 338
Query: 374 GRAGEAMKLLKEL-QNKNLIDGYTYTKLLD 402
GR EA ++L E+ ++K D TY+ ++D
Sbjct: 339 GRVDEAYRILLEMVESKVTPDVITYSSIID 368
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 114/230 (49%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +++ + + +A F+ + S +P++ +YN+ G+ ++ Y
Sbjct: 293 FNAMLHALWKNDEQEKACQFFERLLKSGK---KPNVVTYNVAVHGLCKAGR---VDEAYR 346
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +MV + PD+ + +S+I G+ + ++ A +F +M +V+ +P+ ++
Sbjct: 347 -----ILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM-MVHECIPHPVTFMT 400
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+HG +++ A + ++M GF+P ++YN L+ + VE ++ +M K+
Sbjct: 401 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 460
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
R D TY ++ +CR R EA + L ++ N++ +G L++VL
Sbjct: 461 RQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVL 510
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 121/299 (40%), Gaps = 52/299 (17%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY++ L A E ++ +M+ TP Y++II F +A ++ +A V
Sbjct: 327 TYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDV----ITYSSIIDGFCKAGRMDKADDV 382
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M EC P ++ L F K+ V+ + MVN G P +
Sbjct: 383 FTRMMVH---ECIPHPVTFMTLLHGFSEHKKSREAFRVH--------EDMVNAGFIPGLQ 431
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N ++ ++ V AL I+H+M P+ +Y LI LC R A+E D
Sbjct: 432 TYNVLMDCVCGADSVESALEIYHKMKR-KKRQPDCNTYAPLIQCLCRARRVDEAKEFLDV 490
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNL--------------------------- 348
M+ VP+ ++LV L GEV+E L
Sbjct: 491 MEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKK 550
Query: 349 WEMIEK--QRP---VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
WE K + P D TY + EIC+ G+ EA+++++++ K + D TY +L
Sbjct: 551 WEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVL 609
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/338 (17%), Positives = 122/338 (36%), Gaps = 67/338 (19%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
LC + E + LE+ + + D TY + A + DDV +M+
Sbjct: 335 LCKAGRVDEAYRILLEMV-----ESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVH 389
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF----- 221
+ T+++ F+E +K A V + M N+ + P +++YN+L
Sbjct: 390 ECI-PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI---PGLQTYNVLMDCVCGADS 445
Query: 222 ----------LSRGKNTYINHVYMETIRCLFKQ------------MVNDGIEPDIFSLNS 259
+ R K + Y I+CL + M D + P+ ++
Sbjct: 446 VESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHA 505
Query: 260 MIKGYILSNHVNDALRIF--------HQMGVVY-----------------------NYLP 288
+++ V++A + +G + ++
Sbjct: 506 LVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVA 565
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
++ +Y + +C G+ A E+ ++M KG P +Y +++ +L VE +
Sbjct: 566 DAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEF 625
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+M + +TY ++ E C A EA ++ + +
Sbjct: 626 EKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAM 663
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Query: 256 SLNSMIKGYILSNHVND---ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + G +L V D A F G + N+++ L++ R + A L
Sbjct: 40 TVTPEVAGRVL-QQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRL 98
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
E P+ Y ++++ G+V++ + L EM E+ +D + + T++ +CR
Sbjct: 99 LKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCR 158
Query: 373 RGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
+GR EA++ K + + + TY +++ L
Sbjct: 159 KGRIDEALEQFKSMGEECSPNVITYNTVVNGL 190
>gi|357511073|ref|XP_003625825.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500840|gb|AES82043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 485
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 54/330 (16%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG--------T 172
LF+WAS F H+ ++Y MTR L + + + ++ + P C T
Sbjct: 82 FHLFSWASTLDTFSHNHTSYEWMTRTLALSHRFSLLRTLLTFISTNPCQCSQAIFSCPQT 141
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E ++ I ++ +A K AVY F M+ R ++ +PS+ NIL F+ G+
Sbjct: 142 EPIFRFAIQYYCKAFKFDDAVYAFNVMR--RLIDGKPSVSVCNILIHGFVKSGRFDRAFE 199
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------------ 280
Y QMV D I+PD+F+ N +I GY AL +F +M
Sbjct: 200 FY--------NQMVKDRIKPDVFTFNILISGYCRDFKFGFALEMFDEMRKMGCHPNVVTF 251
Query: 281 -----------------GVVYNYLP-----NSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
G+VY + + + + L+ GLC +GR +L E +
Sbjct: 252 NTLIKGLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCKEGRVSQVCDLLMEFSK 311
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G +P Y LV L GE + ++ ++E+ K I+ ++D + G+ E
Sbjct: 312 RGVLPKGYDYFVLVEILCGKGEAFKALEVIYELWSKGCVPSLISCIVMIDGLRGLGKIEE 371
Query: 379 AMKLLKEL--QNKNLIDGYTYTKLLDVLED 406
AM+L++++ + ++D T+ +L L D
Sbjct: 372 AMRLVEKMLKEEGMVLDVVTFNSVLQDLCD 401
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
++ + G P + S MI G + +A+R+ +M + + +++ ++ LC
Sbjct: 343 ELWSKGCVPSLISCIVMIDGLRGLGKIEEAMRLVEKMLKEEGMVLDVVTFNSVLQDLCDA 402
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
GRT++A L KG P + +Y LV+ G E + EM++K D +Y
Sbjct: 403 GRTEDANRLRLLASSKGLEPDAMTYKILVAGYRGEGNQSEGELVVNEMLDKGFIPDLASY 462
Query: 364 RTVLDEI--CRR 373
++D + C+R
Sbjct: 463 NKLMDALSNCQR 474
>gi|15228104|ref|NP_181260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216851|sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230
gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana]
gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana]
gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana]
gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 757
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 145/315 (46%), Gaps = 15/315 (4%)
Query: 89 TQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLG 148
T+ + ++ +L P +++ + NV+ + L+ F W + RHD T+ M + LG
Sbjct: 102 TRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLG 161
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
++ M E ++ +I + +A + +V +F+ MK+ L
Sbjct: 162 EVSKLNHARCILLDM-PEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKD---LGVE 217
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+I+SYN LF L RG+ YM R F +MV++G+EP + N M+ G+ LS
Sbjct: 218 RTIKSYNSLFKVILRRGR-------YMMAKR-YFNKMVSEGVEPTRHTYNLMLWGFFLSL 269
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ ALR F M P+ +++ +I+G C + A +L EMK PS SY
Sbjct: 270 RLETALRFFEDMKT-RGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSY 328
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+++ V++ ++ EM + TY T+L +C G+ EA +LK +
Sbjct: 329 TTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMA 388
Query: 389 KNLI--DGYTYTKLL 401
K++ D + KLL
Sbjct: 389 KHIAPKDNSIFLKLL 403
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 115/284 (40%), Gaps = 23/284 (8%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
+D L E + +P +A+TY + L A E +++ M+A +
Sbjct: 342 DDGLRIFEEMRSSGIEP----NATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNS 397
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
++ ++ ++A ++ A V K M L Y +L +N Y
Sbjct: 398 IFLKLLVSQSKAGDMAAATEVLKAMAT---LNVPAEAGHYGVLI-------ENQCKASAY 447
Query: 235 METIRCL----FKQMV---NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
I+ L K+++ D +E + + N +I+ + A +F Q+ + +
Sbjct: 448 NRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQL--MKRGV 505
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
+ + + LI G +G ++ E+ M R+G S +Y L+ + GE +
Sbjct: 506 QDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTA 565
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
L M+E D +R+V++ + GR A +++ + +KN+
Sbjct: 566 LDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNV 609
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 132/265 (49%), Gaps = 48/265 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I ++ S A+ + + M+ C+P++ +Y + + K+T +N M
Sbjct: 200 YSTVINGLCKSGNTSMALQLLRKMEEKG---CKPNLVAYTTIIDSLC---KDTLVNDA-M 252
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L +MV+ GI PD+ + ++++ G+ H+N+A +F++M V N +PN+ ++
Sbjct: 253 D----LLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEM-VGRNVMPNTVTFTI 307
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL------- 348
L+ GLC +G AR + + M +KG P++ +YN+L+ LN +++E K L
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367
Query: 349 ----------------------------WEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
EM EK+ D +TY T++ +C+ GR EA+
Sbjct: 368 CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEAL 427
Query: 381 KLLKELQNKNLI-DGYTYTKLLDVL 404
L KE+ + L+ D TY+ LLD L
Sbjct: 428 NLFKEMCSSGLLPDLMTYSTLLDGL 452
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 107/216 (49%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+TI++ F L+ A +F M RN+ P+ ++ IL G +
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEMV-GRNV--MPNTVTFTILVDGLCKEG--------MV 318
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
RC+F+ M G EP+ ++ N+++ GY L+N +++A ++ M V P SY+
Sbjct: 319 SEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM-VDKGCAPVVHSYNI 377
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C + R A+ L EM K P + +Y++L+ L G +E + EM
Sbjct: 378 LINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSG 437
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D +TY T+LD +C+ G EA+KLLK +Q +
Sbjct: 438 LLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 96/176 (54%), Gaps = 4/176 (2%)
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+NHV + +M GI+PD + N++I G + + +A+ +F++M V + P+
Sbjct: 140 LNHVVFAI--SVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEM-VRRGHQPD 196
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
SY +I+GLC G T A +L +M+ KG P+ +Y +++ +L + V + + L
Sbjct: 197 VISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLS 256
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
EM+++ P D +TY T+L C G EA L E+ +N++ + T+T L+D L
Sbjct: 257 EMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T++ + + A+ +FK M +S L P + +Y+ L G ++
Sbjct: 410 YSTLMQGLCQVGRPQEALNLFKEMCSSGLL---PDLMTYSTLLDGLCKHG--------HL 458
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L K M IEPDI N +I+G ++ + A +F ++ P +Y
Sbjct: 459 DEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKL-FADGIQPTIRTYTI 517
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GL +G + A EL +M+ GF+P+S SYN ++ N + ++ + EM+ K+
Sbjct: 518 MIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKR 577
Query: 356 RPVDFITYRTVLD 368
D T++ +LD
Sbjct: 578 FSADSSTFQMLLD 590
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
N +S + LI+ LC A + +M + G P + ++N+L++ + GE++E V
Sbjct: 126 NVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLF 185
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK----NLIDGYTYTKLLDVL 404
EM+ + D I+Y TV++ +C+ G A++LL++++ K NL+ YT ++D L
Sbjct: 186 NEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLV---AYTTIIDSL 242
Query: 405 EDD 407
D
Sbjct: 243 CKD 245
>gi|297847728|ref|XP_002891745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337587|gb|EFH68004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 147/309 (47%), Gaps = 32/309 (10%)
Query: 107 LCNVMTLQEDPLVCLELF---NWASKQPR--FRHDASTYHIMTRKLGAAKMYQEMDDVVN 161
L +++ + DP ++LF + S P+ FR+ Y I+ KLG +KM+ E+D V+
Sbjct: 12 LASLLRRENDPSAAIKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLL 71
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
Q+ TE L+ +I FF R SRA+++F M R C+ +++S N L
Sbjct: 72 QLKTDTRIVPTEILFCNVINFFGRGRLPSRALHMFDEMPQYR---CQRTVKSLNSLLNTL 128
Query: 222 LSRGKNTYINHVYMETIRCLFKQM------VNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
L G+ F++M +++ +PD + N +I G +DAL+
Sbjct: 129 LKCGE---------------FEKMKERLSSIDEFGKPDACTYNILIHGCSQRGCFDDALK 173
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM-KRKGFVPSSKSYNSLVSA 334
+F +M V P ++ LIHGLC R K A ++ +M K G P+ Y SLV A
Sbjct: 174 LFDEM-VKKKVKPTGVTFGTLIHGLCKNLRVKEALKMKQDMLKVYGVRPTVHIYASLVKA 232
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-ID 393
L GE+ K E E + VD Y T++ + + GR+ E ++L+E+ K D
Sbjct: 233 LCQIGELSFAFKLKDEAYEGKIKVDSAIYSTLISSLIKAGRSNEVSRILEEMSEKGCKPD 292
Query: 394 GYTYTKLLD 402
TY L++
Sbjct: 293 TVTYNVLIN 301
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 16/262 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ DA TY+I+ + + + ++M+ T + T+I+ + ++ A+
Sbjct: 149 KPDACTYNILIHGCSQRGCFDDALKLFDEMVKK-KVKPTGVTFGTLIHGLCKNLRVKEAL 207
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ + M + RP++ Y L A G+ ++ + E K ++
Sbjct: 208 KMKQDMLKVYGV--RPTVHIYASLVKALCQIGELSFAFKLKDEAYEGKIK------VDSA 259
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
I+S ++I I + N+ RI +M P++ +Y+ LI+G C + +++A +
Sbjct: 260 IYS--TLISSLIKAGRSNEVSRILEEMSE-KGCKPDTVTYNVLINGFCVENDSESAYRVL 316
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM KG P SYN ++ L + EE +M + D ++YR V D +C
Sbjct: 317 DEMVEKGLKPDVISYNMILGVLFRIQKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 374 GRAGEAMKLLKELQNKNLIDGY 395
+ EA +L E+ L GY
Sbjct: 377 LQFEEAAAILDEM----LFKGY 394
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A+Y+T+I +A R+ V + ++ C+P +YN+L F +
Sbjct: 259 AIYSTLISSLIKA---GRSNEVSRILEEMSEKGCKPDTVTYNVLINGFCVENDS------ 309
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
E+ + +MV G++PD+ S N ++ +A +F M P++ SY
Sbjct: 310 --ESAYRVLDEMVEKGLKPDVISYNMILGVLFRIQKWEEATYLFEDMPR-RGCSPDTLSY 366
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+ GLC + + A + DEM KG+ P + L +G++E
Sbjct: 367 RIVFDGLCEGLQFEEAAAILDEMLFKGYKPRRDRLERFLQKLCESGKLE 415
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 115/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN II F A ++ A V MKN P I +YNIL + SRG +
Sbjct: 129 YNAIITGFCRANRIDSAYQVLDRMKNKG---FSPDIVTYNILIGSLCSRG--------ML 177
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++ Q++ + +P + + +I+ +L +++A+++ +M + N P+ F+Y+
Sbjct: 178 DSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEM-LEINLQPDMFTYNS 236
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C +G A ++ + KG+ P +YN L+ L G+ E + + +M+ +
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +TY ++ +CR G+ E + LLK+++ K L DGY Y L+ L
Sbjct: 297 CEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAAL 346
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 86/162 (53%), Gaps = 5/162 (3%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGL 300
+ +VN G +PD+ +I G S ++ A+++ H ++ N+ P+ +Y+ +I G
Sbjct: 80 LRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMH---ILENHGHPDLIAYNAIITGF 136
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C R +A ++ D MK KGF P +YN L+ +L G ++ ++ +++++
Sbjct: 137 CRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTV 196
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+TY +++ +G EAMKLL E+ NL D +TY ++
Sbjct: 197 VTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSII 238
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
++ M + C ++ +Y++L ++ GK +E L K M G++PD +
Sbjct: 286 YELMSDMVARGCEANVVTYSVLISSVCRDGK--------VEEGVGLLKDMKKKGLKPDGY 337
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +I V+ A+ + M + +P+ +Y+ ++ LC Q R A + ++
Sbjct: 338 CYDPLIAALCKEGRVDLAIEVLDVM-ISDGCVPDIVNYNTILACLCKQKRADEALSIFEK 396
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
+ G P++ SYNS+ SAL G + + EM++K D ITY +++ +CR G
Sbjct: 397 LGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGM 456
Query: 376 AGEAMKLLKELQ 387
EA++LL +++
Sbjct: 457 VDEAIELLVDME 468
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTI+ + ++ A+ +F+ + + C P+ SYN +F+A S G + +
Sbjct: 374 YNTILACLCKQKRADEALSIFEKLGE---VGCSPNASSYNSMFSALWSTGHKVRALGMIL 430
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
E M++ G++PD + NS+I V++A+ + M + + P+ SY+
Sbjct: 431 E--------MLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYN 482
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
++ GLC R +A E+ M KG P+ +Y L+ + G
Sbjct: 483 IVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGG 527
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 120/307 (39%), Gaps = 54/307 (17%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKL 189
+ D TY+I+ R L ++ ++++ M+A G EA Y+ +I K+
Sbjct: 262 YAPDVITYNILLRGLLNQGKWEAGYELMSDMVAR----GCEANVVTYSVLISSVCRDGKV 317
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
V + K MK +P Y+ L A G+ V M++DG
Sbjct: 318 EEGVGLLKDMKKKG---LKPDGYCYDPLIAALCKEGRVDLAIEV--------LDVMISDG 366
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV--------YNYL-------------- 287
PDI + N+++ ++AL IF ++G V YN +
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRAL 426
Query: 288 ------------PNSFSYDYLIHGLCAQGRTKNARELCD--EMKRKGFVPSSKSYNSLVS 333
P+ +Y+ LI LC G A EL EM+ PS SYN ++
Sbjct: 427 GMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLL 486
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
L V + ++ L M++K + TY +++ I G +A L L N + I
Sbjct: 487 GLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAIS 546
Query: 394 GYTYTKL 400
+++ +L
Sbjct: 547 EHSFERL 553
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 111/213 (52%), Gaps = 12/213 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YN +I F++ + A +F+ M C P++ +YN L + F +G+
Sbjct: 158 VVYNVLIDGFSKKGDMGEAYRLFEEMLEK---GCIPTVFTYNSLLSGFSRKGE------- 207
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
++ LFK M+ G P+IF+ N+++ G+ + +A R+F +M + P+ SY
Sbjct: 208 -FGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL-GCPPDVVSY 265
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LI G+C++G+ A+ L EM R G P SYN L+ + +G ++ +K +E+ +
Sbjct: 266 NTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPK 325
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D +Y T++D +CR G+ G A + K++
Sbjct: 326 SGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 139/326 (42%), Gaps = 56/326 (17%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
+ F WA Q + H +Y+ + L + + N MLA T Y ++
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYT-YGYLL 59
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+A++ A VF+ M C P++ SY+IL A L RG+ ++
Sbjct: 60 RSLCQAQRFEEARSVFRGMAAQ---GCSPNVFSYSILI-AGLCRGQK-------VDEAAE 108
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNYL----- 287
L +M++ G +P++ + S++ G + +A+ +F +M GVVYN L
Sbjct: 109 LLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFS 168
Query: 288 ---------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
P F+Y+ L+ G +G + L +M R+G VP+
Sbjct: 169 KKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++N+L+ G++ E + EM P D ++Y T++ +C +G+ EA +LL+E+
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREM 288
Query: 387 QNKN----------LIDGYTYTKLLD 402
LIDGY+ + LD
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALD 314
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 20/270 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLAT---PSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+Y I+ L + E +++N+M+ P+ Y +++ + KL AV +
Sbjct: 89 SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNV----VTYGSLLSGLCKMGKLKEAVDL 144
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M C P YN+L F +G E R LF++M+ G P +F
Sbjct: 145 FSRMVYR---GCPPDGVVYNVLIDGFSKKGDMG-------EAYR-LFEEMLEKGCIPTVF 193
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NS++ G+ +F M + +PN F+++ L+ G C G A L E
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDM-LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+ G P SYN+L+ + G+ E + L EMI D ++Y ++D + G
Sbjct: 253 MRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
A+KL E+ L D ++Y+ ++D L
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ F + + A +F M R+L C P + SYN L S+GK
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEM---RSLGCPPDVVSYNTLIRGMCSKGKPH------- 279
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R L ++M+ G+ PDI S N +I GY S ++ A+++F+++ P++FSY
Sbjct: 280 EAQR-LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI-PKSGLEPDAFSYST 337
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC G+ A + +M G P + LV L + E+ + M++ +
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
Y ++ ++C+ R+ + ++ EL + +K++
Sbjct: 398 CVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVI 443
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ F+ + R +FK M C P+I ++N L F G + +++
Sbjct: 195 YNSLLSGFSRKGEFGRVQSLFKDMLRQ---GCVPNIFTFNNLLDGFCKMGDMVEAHRLFL 251
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E M + G PD+ S N++I+G ++A R+ +M + P+ SY+
Sbjct: 252 E--------MRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREM-IRSGVGPDIVSYNI 302
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G G +A +L E+ + G P + SY++++ L G+V +MI
Sbjct: 303 LIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANG 362
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D ++ +CR R E+ +L + +
Sbjct: 363 SAPDAAVVIPLVIGLCRGERLTESCELFQAM 393
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 38/178 (21%)
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIH----------------------------------- 298
+ F G +Y + SY+YL+
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
LC R + AR + M +G P+ SY+ L++ L +V+E + L EMI+
Sbjct: 61 SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFGNSIR 413
+ +TY ++L +C+ G+ EA+ L + + DG Y L+D + D G + R
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+I +YN L K + H E R LF +M G PD+ + ++IKG +
Sbjct: 137 PNIVTYNTLI-------KGLCMEHRISEATR-LFLRMQKLGCTPDVVTYGTLIKGLCGTG 188
Query: 269 HVNDALRIFHQM-----GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
++N AL++ +M N PN +Y+ ++ GLC GR A++L +EMK +G +P
Sbjct: 189 NINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIP 248
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
S SYNSL+ G+ EE+ + L EM+++ D +T+ ++D +C+ G+ EA KLL
Sbjct: 249 SIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLL 308
Query: 384 KELQNKNLI-DGYTYTKLLD 402
+ ++ D TY L++
Sbjct: 309 GVMIESGIVPDLVTYNSLIE 328
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 16/233 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I ++S A +F M + L C P + +Y L G ++
Sbjct: 142 YNTLIKGLCMEHRISEATRLFLRM---QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQ 198
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + + + +N +P++ + N ++ G ++A ++F +M +P+ SY+
Sbjct: 199 EMLNDISRYEIN--CKPNVITYNIIVDGLCKVGREDEAKQLFEEMKT-QGMIPSIISYNS 255
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHG C G+ + ++ L DEM +G P ++N L+ L G+V E K L MIE
Sbjct: 256 LIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESG 315
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYT 398
D +TY ++++ C G A +L + +K LI+GY+ T
Sbjct: 316 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKT 368
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 128/278 (46%), Gaps = 24/278 (8%)
Query: 136 DASTYHIMTRKLG-------AAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEAR 187
D TY + + L A K++QEM +N + C + YN I+ +
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEM---LNDISRYEINCKPNVITYNIIVDGLCKVG 229
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+ A +F+ MK + PSI SYN L F GK + E+ R L +M++
Sbjct: 230 REDEAKQLFEEMKTQGMI---PSIISYNSLIHGFCCAGK-------WEESKR-LLDEMLD 278
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G++PD+ + N +I V +A ++ M + +P+ +Y+ LI G C G
Sbjct: 279 QGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM-IESGIVPDLVTYNSLIEGFCMVGDLN 337
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+AREL M KG P SYN L++ + +VEE +K EM+ + + ITY ++L
Sbjct: 338 SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLL 397
Query: 368 DEICRRGRAGEAMKLLKELQNKNLID-GYTYTKLLDVL 404
I G+ +A KL ++ + + YTY LD L
Sbjct: 398 KGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 435
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YN +I +++ K+ A+ ++ M RP++ +Y+ L GK
Sbjct: 358 YNVLINGYSKTLKVEEAMKLYNEMLLVGK---RPNVITYDSLLKGIFLAGKVDDAKKLFS 414
Query: 227 ---------NTYINHVYMETI---RCLFKQMV------NDGIEPDIFSLNSMIKGYILSN 268
N+Y ++++ + CLF+ M + + +I +LN +I G +
Sbjct: 415 VMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAG 474
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A +F ++ + PN +Y +IHG C +G+ A L +M+ G P +Y
Sbjct: 475 KLETAWELFEKLSN-EGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITY 533
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+ + ++EE V+ L M +K D IT V+D + + + E + LL
Sbjct: 534 NTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPI 593
Query: 389 KNLID 393
+ +D
Sbjct: 594 QKGVD 598
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 150/317 (47%), Gaps = 19/317 (5%)
Query: 89 TQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLG 148
T+ + ++ +L P +++ + NV+ + L+ F W + RHD T+ M + LG
Sbjct: 101 TRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLG 160
Query: 149 AAKMYQEMDDVVNQMLATP--SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
Q+++ +L P E ++ +I + +A + +V +F+ MK +L
Sbjct: 161 EV---QKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMK---DLG 214
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
+I+SYN LF L RG+ YM R F +MV++G+EP + N M+ G+ L
Sbjct: 215 VERTIKSYNTLFKVILRRGR-------YMMAKR-YFNKMVSEGVEPTRHTYNLMLWGFFL 266
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
S + ALR F M P++ +Y+ +I+G C + A +L EMK PS
Sbjct: 267 SLRLETALRFFDDMK-TRGISPDAVTYNTIINGYCRFKKMDEAEKLFVEMKGNNSEPSVV 325
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y +++ V++ ++ EM + TY T+L +C G+ EA +LK +
Sbjct: 326 TYTTMIKGYLSVDRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKNILKNM 385
Query: 387 QNKNLI--DGYTYTKLL 401
K++ D + KLL
Sbjct: 386 MAKHIAPKDNSIFLKLL 402
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 31/258 (12%)
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE------------ARKLSRAVYV 195
G + +++++D + +M+ ++ T L N+I E A+KL A+
Sbjct: 78 GKRQNHEKLEDTICRMMDNRAW--TTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQF 135
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F++ + S + R ++ L G+ +NH RC+ M G+ D
Sbjct: 136 FRWTERSGLIRHD---RDTHMKMIKML--GEVQKLNHA-----RCILLDMPEKGVPWDED 185
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+I+ Y + V ++++IF +M GV SY+ L + +GR A+
Sbjct: 186 MFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIK----SYNTLFKVILRRGRYMMAKRY 241
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++M +G P+ +YN ++ L+ +E ++ +M + D +TY T+++ CR
Sbjct: 242 FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRGISPDAVTYNTIINGYCR 301
Query: 373 RGRAGEAMKLLKELQNKN 390
+ EA KL E++ N
Sbjct: 302 FKKMDEAEKLFVEMKGNN 319
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%)
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G +G +++ E+ M R+G + +Y L+ + GE + L M+E
Sbjct: 513 LIRGHAKEGNPESSYEILKIMSRRGVPREANAYELLIKSYMSKGEPGDAKTALDSMVEDG 572
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D +R+V++ + GR A +++ + +KN+
Sbjct: 573 HVPDSALFRSVIESLFEDGRVQTASRVMMIMIDKNV 608
>gi|297810021|ref|XP_002872894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318731|gb|EFH49153.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1162
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 156/344 (45%), Gaps = 62/344 (18%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q DPL+ E+F++AS+QP FRH S+Y I+ KLG A+ + +DDV+ + ++ + T
Sbjct: 63 QSDPLLAKEIFDYASQQPNFRHSQSSYLILILKLGRARYFNLIDDVLAKHRSS-GYPLTG 121
Query: 174 ALYNTIIYFFAEAR---KLSRAVY------------------------------VFKYMK 200
++ +I +AEA+ K+ R Y F+ K
Sbjct: 122 EIFTYLIKVYAEAKIPEKVLRTFYKMLEFNFTPQPKHLNRILEVLVSHRGYLQKAFELFK 181
Query: 201 NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM 260
+SR P+ RSYNIL AF N ++ Y LF +M+ + PD+ S +
Sbjct: 182 SSRLHGVMPNTRSYNILMQAFC---LNDDLSIAYQ-----LFGKMLERDVVPDVESYKIL 233
Query: 261 IKGYILSNHVNDALRIFHQM---GVVYNYL---PNSFSYDYLIHGLCAQGRTKNARELCD 314
IKG+ VN A+ + M G V + L P+ Y+ +I G C + R +AR++ D
Sbjct: 234 IKGFCRKGQVNGAMELLEDMLNKGFVPDRLSCNPDLVHYNTIILGFCREDRAMDARKVLD 293
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M +L+ L G +E K L EMI K F ++ C G
Sbjct: 294 DML------------TLIGGLCDQGMFDEGKKYLQEMISKGFSPHFSVSNCLVKGFCSFG 341
Query: 375 RAGEAMKLLK-ELQNKNLIDGYTYTKLLDVL-EDDFGNSIRHHL 416
+ EA +++ ++N ++ T+ ++ ++ ++D I+ L
Sbjct: 342 KVEEACDVVEVVMKNGEILHSDTWEMIIPLICKEDESEKIKRFL 385
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 147/336 (43%), Gaps = 60/336 (17%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVN--------------- 161
P L F++ S P F H +Y M L A +M Q+ + +++
Sbjct: 90 PKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVF 149
Query: 162 -QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE-----CR------- 208
+L T + +++ ++ + E +S A+ F+ K NL+ C+
Sbjct: 150 ASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKK-HNLKIPFNGCKCLLERMI 208
Query: 209 ---------------------PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
P++ ++N+L GK ++ + +F ++
Sbjct: 209 KMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGK--------VKDAQLIFDEIRK 260
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G++P S N++I GY S ++ + R+ M + P+ F+Y LI GLC + + +
Sbjct: 261 TGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEE-FRVFPDVFTYSALIDGLCKECQLE 319
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A L EM +G VP+ ++ +L++ NG V+ ++ +M K D + Y T++
Sbjct: 320 DANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLI 379
Query: 368 DEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +C+ G EA K + E+ + LI D +TYT LLD
Sbjct: 380 DGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLD 415
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 140/332 (42%), Gaps = 54/332 (16%)
Query: 111 MTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL---GAAKMYQEMDDVVNQMLATP 167
M P+V LE F + + T++++ +L G K Q + D + + P
Sbjct: 207 MIKMSSPMVALE-FYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQP 265
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
T +NT+I + ++ L + M+ R P + +Y+ L +
Sbjct: 266 ----TAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVF---PDVFTYSALIDGLCKECQL 318
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG------ 281
NH LFK+M + G+ P+ + ++I G + V+ AL I+ QM
Sbjct: 319 EDANH--------LFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKA 370
Query: 282 --VVYNYL--------------------------PNSFSYDYLIHGLCAQGRTKNARELC 313
V+YN L P+ F+Y L+ G C +G + A E+
Sbjct: 371 DLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMR 430
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
EM ++G + ++ +++S L +G++ + + L EM+ D TY V+D C++
Sbjct: 431 KEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKK 490
Query: 374 GRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
G KLLKE+Q+ I G TY L++ L
Sbjct: 491 GDVKMGFKLLKEMQSDGHIPGVITYNVLMNGL 522
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 96/233 (41%), Gaps = 24/233 (10%)
Query: 160 VNQMLATPSFCGTEALYNTII------YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
+ Q + T LYNT+I +F EARK F R L P +
Sbjct: 359 IYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARK-------FVGEMTKRGL--IPDKFT 409
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y L G +E + K+MV +GI+ D + ++I G + DA
Sbjct: 410 YTTLLDGSCKEGD--------LELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDA 461
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R +M + P+ +Y ++ G C +G K +L EM+ G +P +YN L++
Sbjct: 462 ERTLREM-LRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMN 520
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L G+V+ L M+ D ITY +L C+ G+ G+ + E+
Sbjct: 521 GLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM 573
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 12/287 (4%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA 165
+LC ++ L D +E+F WA Q + H S Y+++ KLGAA ++ +D ++ QM
Sbjct: 73 QLCKLLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQM-K 131
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
E+L+ I+ ++ A +A + MK C PS RSYN++ +
Sbjct: 132 EEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYC--CEPSFRSYNVVLDVLVVGN 189
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+ ++V F M++ G+ P+ ++ ++K + N V++A + M +
Sbjct: 190 CPSVASNV--------FYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDM-TKHG 240
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+PNS Y LI L + R A +L +EM G P ++N+++ V E
Sbjct: 241 CVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGA 300
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
K + MI K + +TY ++ +C+ R EA LL ++ N++
Sbjct: 301 KLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVV 347
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ + +TY I+ +E ++ +ML T F YN +I + K+ A+
Sbjct: 414 KPNLNTYTILIDGFCKKGQLEEAGLILREML-TKGFSLNTVGYNALISALCKHGKIHEAL 472
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F M + C+P I ++N L + ME L++ MV +G+ +
Sbjct: 473 DMFGEMSSKG---CKPDIFTFNSLIFGLCRVDE--------MEDALALYRDMVLEGVIAN 521
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNAREL 312
+ N++I ++ + +AL++ + M ++ P + +Y+ LI LC G + L
Sbjct: 522 SVTFNTLIHAFLRRGEIQEALKLVNDM--LFRGCPLDEITYNGLIKALCKTGAVEKGLGL 579
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+EM RKG PS + N L++ G+V ++ + +MI + D +TY ++++ +C+
Sbjct: 580 FEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCK 639
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
RGR EA+ L ++LQ + + D TY L+
Sbjct: 640 RGRIQEALNLFEKLQAEGIQPDSITYNTLI 669
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++ N+++ G++ + +N+A + + Y+P+ F++ L++GLC +G +A E
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L ++M KG P+ +Y L+ G++EE L EM+ K ++ + Y ++ +C
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ G+ EA+ + E+ +K D +T+ L+
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLI 494
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +N L F+ G+ +N E ++ +M+N+G PD+F+ ++++ G
Sbjct: 344 PNVVHFNTLVNGFVRNGR---LN----EATAFVYDKMINNGYVPDVFTFSTLVNGLCKKG 396
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
AL + + M PN +Y LI G C +G+ + A + EM KGF ++ Y
Sbjct: 397 LFGSALELVNDMDA-KGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGY 455
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+SAL +G++ E + EM K D T+ +++ +CR +A+ L +++
Sbjct: 456 NALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVL 515
Query: 389 KNLI 392
+ +I
Sbjct: 516 EGVI 519
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 12/178 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I+ F ++ A+ K + + C +YN L A G +
Sbjct: 525 FNTLIHAFLRRGEIQEAL---KLVNDMLFRGCPLDEITYNGLIKALCKTGA--------V 573
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF++M+ G+ P I + N +I G+ + V++AL M + + P+ +Y+
Sbjct: 574 EKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDM-IHRGFSPDIVTYNS 632
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI+GLC +GR + A L ++++ +G P S +YN+L+ L G ++ L+ +E
Sbjct: 633 LINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVE 690
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 17/181 (9%)
Query: 154 QEMDDVVNQML--ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
QE +VN ML P E YN +I + + + + +F+ M PSI
Sbjct: 539 QEALKLVNDMLFRGCPL---DEITYNGLIKALCKTGAVEKGLGLFEEMIRKG---LTPSI 592
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
+ NIL F + GK H +E +R M++ G PDI + NS+I G +
Sbjct: 593 ITCNILINGFCTAGKV----HNALEFMR----DMIHRGFSPDIVTYNSLINGLCKRGRIQ 644
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
+AL +F ++ P+S +Y+ LI LC +G +A L GFVP+ ++N L
Sbjct: 645 EALNLFEKLQA-EGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNIL 703
Query: 332 V 332
V
Sbjct: 704 V 704
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 134/282 (47%), Gaps = 18/282 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D TY I+ Y++ ++++M C + + YN ++ + ++ A
Sbjct: 200 DVVTYTILLEATCKRSGYKQAMKLLDEM--HDKGCAPDIVTYNVVLNGICQEGRVEDA-- 255
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+++KN + C P+ SYNI+ + + E L ++M + G P++
Sbjct: 256 -MEFLKNLPSYGCEPNTVSYNIVLKGLFTAER--------WEDAEKLMEEMAHKGCPPNV 306
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N +I V A+ + QM Y PNS SY+ L+H C Q + A E +
Sbjct: 307 VTFNMLISFLCRRGLVEPAMEVLEQMPQ-YGCTPNSLSYNPLLHAFCKQKKIHKAMEFVE 365
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M +G P SYN+L++AL NGEV+ ++ L ++ +K I+Y TV+D + + G
Sbjct: 366 LMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAG 425
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFGNSIR 413
+ EA++LL E+ +K L D TY+ + L ED ++R
Sbjct: 426 KTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 4/137 (2%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD+ N+M+ GY + ++ A R+ M V P++++Y+ LI GLC +GRT NA
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMPVE----PDAYTYNTLIRGLCGRGRTSNALA 187
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ ++M R+G +P +Y L+ A ++ +K L EM +K D +TY VL+ IC
Sbjct: 188 VLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGIC 247
Query: 372 RRGRAGEAMKLLKELQN 388
+ GR +AM+ LK L +
Sbjct: 248 QEGRVEDAMEFLKNLPS 264
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 19/258 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSF-CGTEAL-YNTIIYFFAEARKLSRAVYVF 196
T++++ L + + +V+ QM P + C +L YN +++ F + +K+ +A+
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQM---PQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
+ M SR C P I SYN L TA G+ V +E L Q+ + G P + S
Sbjct: 365 ELMV-SRG--CYPDIVSYNTLLTALCRNGEV----DVAIE----LLHQLKDKGCSPVLIS 413
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA-RELCDE 315
N++I G + +AL + +M P+ +Y + GLC + R + A R C +
Sbjct: 414 YNTVIDGLTKAGKTKEALELLDEM-TSKGLQPDIITYSTIASGLCREDRIEEAVRTFC-K 471
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
++ G P++ YN+++ L E + MI + TY +++ + G
Sbjct: 472 VQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGL 531
Query: 376 AGEAMKLLKELQNKNLID 393
EA +L +L ++ +++
Sbjct: 532 VKEARELFAQLCSRGVVN 549
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 47/213 (22%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + YN + + G+ ++ R L M +EPD ++ N++I+G
Sbjct: 132 PDVMVYNAMVAGYCGAGQ--------LDAARRLVADM---PVEPDAYTYNTLIRGLCGRG 180
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++AL + M LP+ +Y L+ C + K A +L DEM KG P +Y
Sbjct: 181 RTSNALAVLEDM-FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTY 239
Query: 329 NSLVSALALNGEVE---ETVKNL------------------------W--------EMIE 353
N +++ + G VE E +KNL W EM
Sbjct: 240 NVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAH 299
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
K P + +T+ ++ +CRRG AM++L+++
Sbjct: 300 KGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQM 332
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSY-DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++DALR+ + + P + LI LCA GRT +AR + + G P
Sbjct: 81 GELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRV---LAASG--PDVM 135
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDEICRRGRAGEAMKLLK 384
YN++V+ G+++ + + +M PV D TY T++ +C RGR A+ +L+
Sbjct: 136 VYNAMVAGYCGAGQLDAARRLVADM-----PVEPDAYTYNTLIRGLCGRGRTSNALAVLE 190
Query: 385 ELQNKN-LIDGYTYTKLLD 402
++ + L D TYT LL+
Sbjct: 191 DMFRRGCLPDVVTYTILLE 209
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 146/314 (46%), Gaps = 39/314 (12%)
Query: 94 AVSELPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKM 152
A++ L F+NE + V+ L+ +P LE F ASKQP+FR D S+Y + L A+M
Sbjct: 88 ALANLSFSFSNELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARM 147
Query: 153 YQEMDDVVNQMLATPSFCG----TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
Y+E+ +N+++ C A+++ ++ +VY R
Sbjct: 148 YKEVRVYLNELVV---LCKNNYIASAVWDELV-----------SVY--------REFSFS 185
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ ++++ + +G + C+F M G P + S NS++ + +
Sbjct: 186 PTV--FDMILKVYAEKGMTKF--------ALCVFDNMGKCGRVPSLRSCNSLLSNLVQNG 235
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
AL ++ QM + LP+ FSY +++ C +GR A EM+R P+ +Y
Sbjct: 236 EAFKALLVYEQM-IALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTY 294
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
NSL+ G+V K L M EK P + TY ++ C+RG+ +A KL +
Sbjct: 295 NSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMME 354
Query: 389 KNL-IDGYTYTKLL 401
KNL +D + Y L+
Sbjct: 355 KNLFVDEHVYGVLI 368
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 212 RSYNILFTAFLSRG--------------KNTYIN-HVYMETIRC------------LFKQ 244
R+Y +L + RG KN +++ HVY I +
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M+ G++ + NS+I GY HVN A + M +N P+S+ Y+ L+ G C Q
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKD-WNLKPDSYGYNTLLDGFCKQE 445
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV-DFITY 363
A +LCDEM KG + +YN+L+ L G VE + ++W ++ K+ + +TY
Sbjct: 446 DFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHAL-HIWNLMHKRGVAPNEVTY 504
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
T+LD + G AM + K+ +K T
Sbjct: 505 CTLLDAFFKVGTFDRAMMIWKDALSKGFTKSIT 537
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 60/328 (18%)
Query: 125 NWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML-------------ATPSFCG 171
NW S P FRH + +Y M L A +M+QE ++ ++ A G
Sbjct: 89 NWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG 148
Query: 172 TEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR-------------------- 208
T +++ ++ + ++ +S A+ F+ ++NS N +
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNS-NFQIPFHGCGYLLDKMINSNSPVTI 207
Query: 209 -------------PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
P ++ YNIL F G + + +F ++ G+ P
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGS--------IRDAKLIFNEIRKRGLRPTTV 259
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N++I G S ++++ R+ M Y P+ F+Y LIHGLC +GR A +L DE
Sbjct: 260 SFNTLINGLCKSRNLDEGFRLKKTMEENRIY-PDVFTYSVLIHGLCKEGRLDVAEQLFDE 318
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+++G P+ ++ +L+ + ++ + +M+ D + Y T+L+ +C+ G
Sbjct: 319 MQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+A KL+ E++ + D TYT L+D
Sbjct: 379 VNKARKLVDEMRMVGMKPDKITYTTLID 406
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 47/251 (18%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T +NT+I ++R L + K M+ +R P + +Y++L G+
Sbjct: 257 TTVSFNTLINGLCKSRNLDEGFRLKKTMEENR---IYPDVFTYSVLIHGLCKEGR----- 308
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
++ LF +M G+ P+ + ++I G S ++ A+ +HQM + P+
Sbjct: 309 ---LDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQM-LTMGVKPDLV 364
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV------------------- 332
Y+ L++GLC G AR+L DEM+ G P +Y +L+
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424
Query: 333 ----------------SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
S +G V + + L EM+E D TY V+D C++G
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484
Query: 377 GEAMKLLKELQ 387
KLLKE+Q
Sbjct: 485 KMGFKLLKEMQ 495
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 15/224 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YNT++ + +++A K + R + +P +Y L + G
Sbjct: 364 VMYNTLLNGLCKVGDVNKAR---KLVDEMRMVGMKPDKITYTTLIDGYCKEGD------- 413
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+E+ + K M +G+ D + ++I G+ V DA R +M V P+ +Y
Sbjct: 414 -LESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM-VEAGMKPDDATY 471
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+I G C +G K +L EM+ G P +YN L++ L G+++ L M+
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN 531
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTY 397
D ITY +L+ C+ G+A + +KL E K LI Y Y
Sbjct: 532 LGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAY 572
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 145/331 (43%), Gaps = 50/331 (15%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY 176
P L F W S Q FR +Y MT L KM E ++ +++ +++
Sbjct: 83 PPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVF 142
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKN--------SRNLECRPSIRSYNI---------LFT 219
+++ EAR ++ VF + N S ++C +R +N+ LF
Sbjct: 143 TSVL----EARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFD 198
Query: 220 AFLSRGKNTYINHVYMETIRC---------------------------LFKQMVNDGIEP 252
+ + Y E + C LF ++ G+ P
Sbjct: 199 RLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRP 258
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ S N++I GY S +++ R+ M + P+ F+Y LI+GLC +G+ +A +L
Sbjct: 259 TVVSFNTLINGYCKSGNLDQGFRLKRFM-MENRVFPDVFTYSVLINGLCKEGQLDDANKL 317
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM +G VP+ ++ +L++ + G + ++ +M+ K D ITY T+++ +C+
Sbjct: 318 FLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
G EA KL+ E+ + L D +TYT L+D
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLID 408
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 32/257 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I + ++ L + + ++M +R P + +Y++L G+ N +++
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVF---PDVFTYSVLINGLCKEGQLDDANKLFL 319
Query: 236 E----------------------TIRC-----LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
E T R +++QM+ G++PD+ + N++I G
Sbjct: 320 EMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVG 379
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ +A ++ +M P+ F+Y LI G C +G ++A E+ EM ++G + ++
Sbjct: 380 DLREAKKLVIEM-TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAF 438
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+S G+V E + L EM+E D TY V+ C++G KLLKE+Q
Sbjct: 439 TALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQC 498
Query: 389 KNLIDG-YTYTKLLDVL 404
+ G TY LL+ L
Sbjct: 499 DGHVPGVVTYNVLLNGL 515
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 115/230 (50%), Gaps = 19/230 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +++ + K++ A +F + R L RP++ S+N L + G +
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEI-GKRGL--RPTVVSFNTLINGYCKSGN--------L 276
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ L + M+ + + PD+F+ + +I G ++DA ++F +M G+V PN +
Sbjct: 277 DQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLV----PNDVT 332
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ LI+G C GR E+ +M RKG P +YN+L++ L G++ E K + EM
Sbjct: 333 FTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMT 392
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++ D TY ++D C+ G A+++ KE+ + + +D +T L+
Sbjct: 393 QRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + L A + M R L +P +Y +L G +
Sbjct: 368 YNTLINGLCKVGDLREAKKLVIEM-TQRGL--KPDKFTYTMLIDGCCKEGD--------L 416
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E+ + K+MV +GIE D + ++I G+ V +A R +M + P+ +Y
Sbjct: 417 ESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM-LEAGIKPDDATYTM 475
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+IHG C +G K +L EM+ G VP +YN L++ L G+++ L M+
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
D ITY +L+ C+ G + KL E K L+ Y +YT L+ L
Sbjct: 536 VVPDDITYNILLEGHCKHGNREDFDKLQSE---KGLVQDYGSYTSLIGDL 582
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 128/267 (47%), Gaps = 19/267 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+I+ R L A +E VV + YNT++ F A ++ A +
Sbjct: 156 TYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGV 215
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M+ RPS+ ++N + G+ ME R +F +M +G+ PD S N
Sbjct: 216 MREG---GVRPSLVTFNTVVNGLCKAGR--------MEDARKMFDEMAREGLTPDGVSYN 264
Query: 259 SMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+++ GY + +++AL +F +M GVV P+ ++ LIH +C G + A L +
Sbjct: 265 TLVSGYCKAGCLHEALAVFAEMAQKGVV----PDVVTFTSLIHAMCRAGNLERAVALVGQ 320
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+ +G + ++ +L+ NG +++ + + EM E + + Y +++ C+ GR
Sbjct: 321 MRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGR 380
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLL 401
EA +L+ E++ K + D TY+ +L
Sbjct: 381 MDEARELIHEMEAKGMKPDVVTYSTIL 407
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 106/197 (53%), Gaps = 13/197 (6%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +YNIL A +RG+ E + + M G P++ + N+++ + +
Sbjct: 152 PNVYTYNILVRALCARGQRE-------EALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAG 204
Query: 269 HVNDALRIFHQM--GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V+ A R+ M G V P+ +++ +++GLC GR ++AR++ DEM R+G P
Sbjct: 205 EVDAAERLVGVMREGGVR---PSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGV 261
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
SYN+LVS G + E + EM +K D +T+ +++ +CR G A+ L+ ++
Sbjct: 262 SYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQM 321
Query: 387 QNKNL-IDGYTYTKLLD 402
+ + L ++ +T+T L+D
Sbjct: 322 RERGLRMNEFTFTALID 338
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + +A L A+ VF M + P + ++ L A G +
Sbjct: 263 YNTLVSGYCKAGCLHEALAVFAEMAQKGVV---PDVVTFTSLIHAMCRAGN--------L 311
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L QM G+ + F+ ++I G+ + ++DAL +M P+ Y+
Sbjct: 312 ERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMREC-RIQPSVVCYNV 370
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C GR AREL EM+ KG P +Y++++S G+ + + +M++K
Sbjct: 371 LINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG 430
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY +++ +C R G+A +L +++ L D +TYT L+D
Sbjct: 431 VVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLID 478
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 23/235 (9%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR--PSIRSYNILFTAFLSRGKNTYI 230
E + +I F L A+ K M+ ECR PS+ YN+L + G+
Sbjct: 330 EFTFTALIDGFCRNGFLDDALLAMKEMR-----ECRIQPSVVCYNVLINGYCKLGR---- 380
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYL 287
M+ R L +M G++PD+ + ++++ GY + A + +M GVV
Sbjct: 381 ----MDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVV---- 432
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P++ +Y LI GLC + R +A EL ++M + G P +Y +L+ G V++ +
Sbjct: 433 PDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSL 492
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
EMI+K D +TY ++D + + R EA +LL +L ++ + D Y L+
Sbjct: 493 HDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF++M+ G++PD F+ ++I G+ +V AL + +M + LP+ +Y LI GL
Sbjct: 457 LFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM-IKKGVLPDVVTYSVLIDGL 515
Query: 301 CAQGRTKNARELCDEMKRKGFVPSS---------------KSYNSLVSALALNGEVEETV 345
RTK A+ L ++ + VP + KS +L+ ++ G + +
Sbjct: 516 SKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQAD 575
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
K M+++ +D Y ++ CR G +A+ K+L
Sbjct: 576 KVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQL 616
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 99/247 (40%), Gaps = 26/247 (10%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + R L + + ++ +ML E Y T+I + + +A+ +
Sbjct: 434 DAITYSSLIRGLCEERRLGDACELFEKMLQL-GLQPDEFTYTTLIDGHCKEGNVQKALSL 492
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M L P + +Y++L LS+ T E R LFK D + +I
Sbjct: 493 HDEMIKKGVL---PDVVTYSVLIDG-LSKSARTK------EAQRLLFKLYYEDPVPDNIK 542
Query: 256 --------------SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
S+ +++KG+ + +N A +++ M + L S Y LIHG C
Sbjct: 543 YEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSV-YSVLIHGHC 601
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G A ++ R GF P+S S SLV L G E + E++ D
Sbjct: 602 RGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAE 661
Query: 362 TYRTVLD 368
T + ++D
Sbjct: 662 TSKALID 668
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 122/253 (48%), Gaps = 24/253 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I+ + + M NS+ + P + ++ + A GK T + V
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIM---PDVVIFSTVVDALCKEGKITEAHDV-- 299
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN-YLPNSFSYD 294
M+ G+EP++ + N+++ G+ L + +++A+++F M V+N Y PN SY+
Sbjct: 300 ------VDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM--VHNGYAPNVISYN 351
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI+G C R A L +EM +K +P++ +YN+L+ L G +++ + EM+
Sbjct: 352 TLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAH 411
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVL 404
+ D TYR +LD +C++ EAM LLK ++ N+ IDG L+
Sbjct: 412 GQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAA 471
Query: 405 EDDFGNSIRHHLR 417
D F N LR
Sbjct: 472 RDIFSNLSSKGLR 484
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PS +N L T+ +++ K T+ L QM + GI PD+++LN +I + N
Sbjct: 65 PSTVDFNRLLTS-IAKTKQ-------YPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLN 116
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
A + ++ + P++ ++ LI GLC +G+ +A L D+M +GF P+ +Y
Sbjct: 117 RPGFAFSVLAKI-LKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTY 175
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L++ L G ++ L M + D + Y +++D +C+ + EA L ++
Sbjct: 176 GTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVG 235
Query: 389 KNL-IDGYTYTKLLDVL 404
+ + D +TYT L+ L
Sbjct: 236 QGISPDIFTYTSLIHSL 252
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + + +++ +A Y+F+ M E P+ +YN L G+ +
Sbjct: 350 YNTLINGYCKIQRMDKATYLFEEMCQK---ELIPNTVTYNTLMHGLCHVGR--------L 398
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF +MV G PD+ + ++ +H+++A+ + + N P+ Y
Sbjct: 399 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEG-SNMDPDIQIYTI 457
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C G + AR++ + KG P+ ++Y +++ L G ++E K EM
Sbjct: 458 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 517
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
D TY T+ + + A A++LL+E+ + D T T L+++L DD
Sbjct: 518 CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD 570
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 10/211 (4%)
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
VF + P + + NIL +F + + V + ++ G++PD
Sbjct: 86 VFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKL--------GLQPDT 137
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ ++I+G + + DAL +F +M + + PN +Y LI+GLC G T A L
Sbjct: 138 ATFTTLIRGLCVEGKIGDALHLFDKM-IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLR 196
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M++ P Y S++ +L + +V E +M+ + D TY +++ +C
Sbjct: 197 SMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC 256
Query: 375 RAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
LL ++ N ++ D ++ ++D L
Sbjct: 257 EWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 103/264 (39%), Gaps = 48/264 (18%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A + T+I K+ A+++F M +P++ +Y L G
Sbjct: 138 ATFTTLIRGLCVEGKIGDALHLFDKMIGEG---FQPNVVTYGTLINGLCKVGNTN----- 189
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
IR L + M +PD+ S+I V +A +F +M V P+ F+Y
Sbjct: 190 --AAIR-LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKM-VGQGISPDIFTY 245
Query: 294 DYLIH-----------------------------------GLCAQGRTKNARELCDEMKR 318
LIH LC +G+ A ++ D M
Sbjct: 246 TSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMII 305
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G P+ +YN+L+ L E++E VK M+ + I+Y T+++ C+ R +
Sbjct: 306 RGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 365
Query: 379 AMKLLKELQNKNLI-DGYTYTKLL 401
A L +E+ K LI + TY L+
Sbjct: 366 ATYLFEEMCQKELIPNTVTYNTLM 389
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 26/270 (9%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY+ + L A +E + ++ A TP Y+ +I A K A+ V
Sbjct: 11 TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVS----YSCLINSLGRAGKWEAALEV 66
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M+ C+P++ +YN L G+ + E +R L +M ++G PD+
Sbjct: 67 VAEMQAKG---CKPNLWTYNTLVDCLGKAGQ-------FDEALR-LLAEMRDNGCVPDVR 115
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ N +I + +++A +F +M G V P++F+Y+ LI+GL GR++ A EL
Sbjct: 116 TYNCLISTLGKAGRLSEAFTLFAEMRERGCV----PDTFTYNSLIYGLGKVGRSQKAMEL 171
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+EM+R G P +Y+SL++ L +GE + K EM + R D IT+ ++D + +
Sbjct: 172 LEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGK 231
Query: 373 RGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
GR +A++LL E++ + + G TY L+
Sbjct: 232 AGRVDDALELLDEMKERGVKPGVVTYNALI 261
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 133/307 (43%), Gaps = 39/307 (12%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT---PSFCGTEALYNTIIYFFAE 185
K ++ D +Y + LG A ++ +VV +M A P+ YNT++ +
Sbjct: 36 KAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLW----TYNTLVDCLGK 91
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------------------- 226
A + A+ + M+++ C P +R+YN L + G+
Sbjct: 92 AGQFDEALRLLAEMRDNG---CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPD 148
Query: 227 -NTYINHVY-------METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
TY + +Y + L ++M G PD+ + +S+I G A ++F
Sbjct: 149 TFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQ 208
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
+M P+S ++ L+ L GR +A EL DEMK +G P +YN+L++
Sbjct: 209 EM-KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKV 267
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTY 397
G++ E L EM D +TY ++ + + + EA ++LK+++ + D TY
Sbjct: 268 GDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITY 327
Query: 398 TKLLDVL 404
L++ L
Sbjct: 328 NTLINGL 334
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 140/344 (40%), Gaps = 84/344 (24%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRA 192
+ D TY + L A E V+ +M C + + YNT+I +A L+ A
Sbjct: 286 KPDVVTYSCLITGLIKASQLDEACQVLKKM--EKEGCPPDTITYNTLINGLGKAGLLNDA 343
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F MK+ C P + +Y+ L TA GK + E+ LF++M + GI+P
Sbjct: 344 GRLFDRMKSKG---CNPDVVTYSTLITAL---GKAARV-----ESACVLFEEMESVGIQP 392
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYN------------------- 285
D+F+ S+I + V+DA R+F +M + YN
Sbjct: 393 DLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIF 452
Query: 286 -------YLPNSFSYDYLIHGL--------------------CA---------------Q 303
LP+ +YD L+ GL CA
Sbjct: 453 EDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSW 512
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G A EL KG P + SYN+L+ ALA G V E L ++ E+ D ++Y
Sbjct: 513 GNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSY 572
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
+++ + + G+ A +LL+E+ + L + +Y+ L+ L+D
Sbjct: 573 SSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQD 616
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 28/277 (10%)
Query: 136 DASTYHIMTRKLG-------AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
D TY + LG A K++QEM + P AL + + +A +
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEM----KRRGRKPDSITFTALMDAL----GKAGR 234
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ A+ + MK +P + +YN L F GK + Y L +M +
Sbjct: 235 VDDALELLDEMKERG---VKPGVVTYNALIAGF---GKVGDLVEAYN-----LLDEMKRN 283
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G +PD+ + + +I G I ++ +++A ++ +M P++ +Y+ LI+GL G +
Sbjct: 284 GCKPDVVTYSCLITGLIKASQLDEACQVLKKM-EKEGCPPDTITYNTLINGLGKAGLLND 342
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L D MK KG P +Y++L++AL VE EM D TY +++
Sbjct: 343 AGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIIT 402
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ + G+ +A +L E++ K L D TY L+ L
Sbjct: 403 VLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSL 439
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN +Y+ L++ L G+ + A+ L +E+K + P SY+ L+++L G+ E ++
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ EM K + TY T++D + + G+ EA++LL E+++ + D TY L+ L
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL 124
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 139/277 (50%), Gaps = 21/277 (7%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FRHD +T+ +M KL +A ++ ++++N+M TE ++ +I + A
Sbjct: 46 FRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRI-TEEIFLSICRGYGRVHMPLDA 104
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ VF M + C+P+ +SY +F + + ++ +K M G+
Sbjct: 105 IRVFHKMN---DFGCKPTDKSYISVFAILVEENQ--------LKVAMSFYKYMREMGVRQ 153
Query: 253 DIFSLNSMIKGYIL-SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+ SLN +IK S ++ A IF +M P+S++Y LI+GLC G+T A+E
Sbjct: 154 SVVSLNVLIKALCKNSGTIDAAFEIFREM-PKRGCDPDSYTYGTLINGLCKLGKTFEAKE 212
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L EM KG PS +Y+ L+ L G V+E + +M +K + TY +++D +C
Sbjct: 213 LFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLC 272
Query: 372 RRGRAGEAMKLLKELQNK----NLIDGYTYTKLLDVL 404
+ G + EAM+LL+ + K N++ TY+ L++ L
Sbjct: 273 KNGGSLEAMELLEMMVRKRHKPNMV---TYSTLINGL 306
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 20/234 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I + K A +FK M C PS+ +Y+ L G +
Sbjct: 194 YGTLINGLCKLGKTFEAKELFKEMDTK---GCSPSVVTYSCLMHGLCQAGN--------V 242
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF +M IEP++F+ +S++ G + +A+ + M V + PN +Y
Sbjct: 243 DEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMM-VRKRHKPNMVTYST 301
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC +G+ A E D MK +G P + Y +++ + +E L EM+ Q
Sbjct: 302 LINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQ 361
Query: 356 RPVDFITY-------RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ +T+ V+ +C G + +L ++ + + ID T+ L+
Sbjct: 362 ISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLV 415
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 17/190 (8%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ +Y+ L GK E + L +M G++PD +I G+
Sbjct: 293 KPNMVTYSTLINGLCKEGK-------LAEAVETL-DRMKLQGLKPDAGLYGKIINGFCNI 344
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSY-------DYLIHGLCAQGRTKNARELCDEMKRKG 320
+A +M V+ PN ++ + ++ GLC G + +L M+ +G
Sbjct: 345 RKFQEAATYLDEM-VLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRG 403
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
+ +++SLV G++ + + EM+ D + V+ R + EA
Sbjct: 404 ISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAF 463
Query: 381 K-LLKELQNK 389
+ ++ EL N+
Sbjct: 464 ESIVVELMNE 473
>gi|297832366|ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
gi|297329905|gb|EFH60324.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
Length = 1056
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 136/289 (47%), Gaps = 18/289 (6%)
Query: 103 NNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQ 162
+++ + ++ Q+ LE F WAS P F H STY + KL + + + ++++
Sbjct: 30 SDDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFYKLCVFRRFDTVYQLLDE 89
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
M + +A++ TII F AR R + V + +PS++ +N + +
Sbjct: 90 MPESTGLPPDDAIFVTIIRGFGRARLTKRVISVVDLVS---KFGIKPSLKVFNSILDVLV 146
Query: 223 SRGKNTYINHVYMETIRCLF-KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
++ R F ++M+ GI+ D ++ ++KG L+N + D ++ M
Sbjct: 147 KED---------IDIAREFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLLQIMK 197
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
PN+ Y+ L+H LC G+ AR L EMK P+ ++N L+SA ++
Sbjct: 198 TC-GVAPNTVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKL 252
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+++ L + D +T V++ +C GR EA+++L+ +++K
Sbjct: 253 IQSMVLLEKCFSLGLVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG 301
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 130/282 (46%), Gaps = 17/282 (6%)
Query: 113 LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT 172
++ED + E F + D TY I+ + L + ++ Q++ T
Sbjct: 146 VKEDIDIAREFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLL-QIMKTCGVAPN 204
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+YNT+++ + K+ RA + MK P+ ++NIL +A Y N
Sbjct: 205 TVVYNTLLHALCKNGKVGRARSLMSEMKE-------PNDVTFNILISA--------YCNE 249
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ L ++ + G+ PD+ ++ +++ V++AL + ++ + + +
Sbjct: 250 QKLIQSMVLLEKCFSLGLVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV-DVVA 308
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ L+ G CA G+ + A+ EM+RKG++P+ ++YN L++ G ++ + +M
Sbjct: 309 CNTLVKGYCAVGKMRVAQRFFQEMERKGYLPNVETYNLLIAGFCDVGMLDSALDTFNDMK 368
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
+F T+ T++ + RGR + +K+L+ +Q+ + G
Sbjct: 369 TDAIRWNFATFNTLIRGLSVRGRTDDGIKILELMQDSETVHG 410
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 112/249 (44%), Gaps = 20/249 (8%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
C+V L L+ FN K R + +T++ + R L + ++ M +
Sbjct: 351 FCDVGMLDS----ALDTFN-DMKTDAIRWNFATFNTLIRGLSVRGRTDDGIKILELMQDS 405
Query: 167 PSFCGTEA-LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
+ G YN++IY F + + A+ +++ L R RS+ ++ + +G
Sbjct: 406 ETVHGARIDPYNSVIYGFYKENRWEDAL---EFLLKMEKLFPRAVDRSFKLI--SLCEKG 460
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
M+ ++ + QM +G P + + +I Y ++ + L + + M V
Sbjct: 461 G--------MDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETLELINDM-VTRG 511
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
YLP S +++ +I G C + + N + ++M +G VP +SYN L+ L + G++++
Sbjct: 512 YLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLLEELCVKGDIQKAW 571
Query: 346 KNLWEMIEK 354
L M+EK
Sbjct: 572 LLLSLMVEK 580
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 117/268 (43%), Gaps = 16/268 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+ TY+++ M D N M T + A +NT+I + + + +
Sbjct: 340 NVETYNLLIAGFCDVGMLDSALDTFNDM-KTDAIRWNFATFNTLIRGLSVRGRTDDGIKI 398
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV-YMETIRCLFKQMVNDGIEPDI 254
+ M++S + I YN + F +N + + + ++ + LF + V+
Sbjct: 399 LELMQDSETVH-GARIDPYNSVIYGFYK--ENRWEDALEFLLKMEKLFPRAVDRS----- 450
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
F L S+ + ++D + QM +P+ LIH +G + EL +
Sbjct: 451 FKLISLCE----KGGMDDVKTAYDQM-TGEGGVPSVIVSHCLIHRYSQEGYMEETLELIN 505
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M +G++P S ++N+++ +V +K + +M E+ D +Y +L+E+C +G
Sbjct: 506 DMVTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAERGCVPDRESYNPLLEELCVKG 565
Query: 375 RAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+A LL + K+++ D ++ L+
Sbjct: 566 DIQKAWLLLSLMVEKSIVPDSSMWSSLM 593
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
Y YME L MV G P + N++I G+ + V + ++ M +P
Sbjct: 491 YSQEGYMEETLELINDMVTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFVEDMAE-RGCVP 549
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV------SALALNGEVE 342
+ SY+ L+ LC +G + A L M K VP S ++SL+ +A+ LN ++
Sbjct: 550 DRESYNPLLEELCVKGDIQKAWLLLSLMVEKSIVPDSSMWSSLMFCLSQKTAIHLNTSLQ 609
Query: 343 ETVKN 347
+ ++N
Sbjct: 610 DIIEN 614
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 25/288 (8%)
Query: 127 ASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFF 183
A QP + TY+I+ L K+ E D+ + M A +P YN++I
Sbjct: 229 AGCQP----NVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDI----FTYNSLIQGL 280
Query: 184 AEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK 243
R+ A + M + L P+I ++N+L A GK + V FK
Sbjct: 281 CNFRRWKEASALLNEMTS---LNIMPNIFTFNVLVDAICKEGKVSEAQGV--------FK 329
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
M G+EPD+ + +S++ GY L + +A ++F M + P++FSY+ LI G C
Sbjct: 330 TMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAM-ITKGCKPDAFSYNILIKGYCKA 388
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
R A++L +EM +G P + +YN+L+ L G + E M D TY
Sbjct: 389 KRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTY 448
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDFGN 410
+LD C+ G G+A +L + +Q+ L D Y L+D + FGN
Sbjct: 449 SMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAM-CKFGN 495
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 20/285 (7%)
Query: 112 TLQEDPLV--CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
+L +D LV L++F++ K R D TY+ + + L + ++E ++N+M + +
Sbjct: 244 SLCKDKLVNEALDIFSYM-KAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEM-TSLNI 301
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
+N ++ + K+S A VFK M + P + +Y+ L + R
Sbjct: 302 MPNIFTFNVLVDAICKEGKVSEAQGVFKTMTE---MGVEPDVVTYSSLMYGYSLR----- 353
Query: 230 INHVYMETI--RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
ME + R LF M+ G +PD FS N +IKGY + +++A ++F++M +
Sbjct: 354 -----MEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEM-IHQGLT 407
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P++ +Y+ LIHGLC GR + A++L M G +P +Y+ L+ G + + +
Sbjct: 408 PDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRL 467
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
M D Y ++D +C+ G +A KL EL + L+
Sbjct: 468 FRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLL 512
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
R + A+ F +M + L C I + L +A + G+ Y + L KQM
Sbjct: 73 RNIDDALASFNHMLHREPLPC---IIQFTKLLSAIVKMGQ-------YYGAVISLSKQME 122
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
G+ PDI++L+ +I + V+ A +F +M + P++ +++ LI+GLC G+
Sbjct: 123 LAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKM-IKLGLQPDAVTFNTLINGLCKVGKF 181
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
A E D+ + G P+ +Y ++++ L GE +M E + +TY +
Sbjct: 182 AQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNIL 241
Query: 367 LDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+D +C+ EA+ + ++ K + D +TY L+ L
Sbjct: 242 IDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGL 280
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F +M+ G++PD + N++I G A+ F P ++Y +I+GL
Sbjct: 152 VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS-GCQPTVYTYTTIINGL 210
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G T A L +M+ G P+ +YN L+ +L + V E + M K+ D
Sbjct: 211 CKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDI 270
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
TY +++ +C R EA LL E+ + N++ +T+ L+D +
Sbjct: 271 FTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAI 315
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLS 190
+ DA +Y+I+ + AK E + N+M+ TP YNT+I+ + +L
Sbjct: 372 KPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPD----NVNYNTLIHGLCQLGRLR 427
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A +FK M ++ NL P + +Y++L F G Y+ + LF+ M + +
Sbjct: 428 EAQDLFKNMHSNGNL---PDLFTYSMLLDGFCKEG---YLGKAFR-----LFRVMQSTYL 476
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+PDI N +I ++ DA ++F ++ V LPN Y +I+ LC +G A
Sbjct: 477 KPDIAMYNILIDAMCKFGNLKDARKLFSEL-FVQGLLPNVQIYTTIINNLCKEGLLDEAL 535
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSAL 335
E M+ G P SYN ++
Sbjct: 536 EAFRNMEGDGCPPDEFSYNVIIRGF 560
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 97/242 (40%), Gaps = 54/242 (22%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I + K ++AV F + S C+P++ +Y + G+ T
Sbjct: 168 FNTLINGLCKVGKFAQAVEFFDDFEASG---CQPTVYTYTTIINGLCKIGETT------- 217
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LFK+M G +P++ + N +I VN+AL IF M P+ F+Y+
Sbjct: 218 -AAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKA-KRISPDIFTYNS 275
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC R K A L +EM +P+ ++N LV
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLV----------------------- 312
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDFGNSIRH 414
D IC+ G+ EA + K + + D TY+ L+ +G S+R
Sbjct: 313 ------------DAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLM------YGYSLRM 354
Query: 415 HL 416
+
Sbjct: 355 EI 356
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 149/330 (45%), Gaps = 20/330 (6%)
Query: 71 SRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASK- 129
+R ++ D P L+ ++F A+ L PRF L L DP +C+ L+ WAS+
Sbjct: 42 ARAASILAEEDWFPRLN-SEFAAAMPRLGPRFVVRVLRGAAPL--DPHLCVRLYVWASRF 98
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL 189
F DAS + R L A + + ++A CG E + A +L
Sbjct: 99 GAHFARDAS----VRRALEDALWRRGPAVLSAALVAEVRGCGCEVSEELLRALIASWGRL 154
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A Y + L RPS YN L A + G ++ Y+ F+QM DG
Sbjct: 155 GLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGA---VDTAYLR-----FQQMPADG 206
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+PD F+ N+++ G +++ALR+ QM PN F+Y L+ G C GR ++A
Sbjct: 207 CQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGA-GIRPNVFTYTMLVDGFCNAGRPEDA 265
Query: 310 RELCDEMKRKGFVPSSKSYNSLV-SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
+ D MK KG P+ SY +LV A G + V L E + ++ P ++ +L
Sbjct: 266 VHVFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVM-LTEWLGREPPPHHSAWQCMLY 324
Query: 369 EICRRGRAGEAMKLLKELQNKN-LIDGYTY 397
+ + A E +++ K++ ++ L+D +
Sbjct: 325 CLSKNEMAKEVVEVTKKMNSRGYLLDNAIF 354
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
Y ++ + L K + + + +M+ G + YN +I F +A + +A + K
Sbjct: 388 VYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTS-YNMVIDCFVKAGAVDKAAEIIKE 446
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M+ L P++ ++N L + + G + + + K ++ G+ PDI +
Sbjct: 447 MREKGVL---PNLVTFNTLISGYSKLGN--------VHNAKAVLKMLMEHGLIPDIITFT 495
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
S+I G ++ ++DA F++M + PN+ +Y+ L+H LC+ G A +L ++MK+
Sbjct: 496 SLINGLCHTHQLDDAFDCFNEMAE-WGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKK 554
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G P + S+N+ + + +V++ M+ D TY +++ +C R E
Sbjct: 555 DGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDE 614
Query: 379 AMKLL 383
A ++L
Sbjct: 615 AKEIL 619
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G + A E+ +M R G PS+ YN+L+ A G V+ +M D TY
Sbjct: 155 GLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTY 214
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
T++ +C+RG EA++L+++++ + + +TYT L+D
Sbjct: 215 NTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVD 254
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 156/326 (47%), Gaps = 28/326 (8%)
Query: 91 FRCAVSELPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGA 149
F AV+E P+ L V+ T++ P V L F WA +Q F+ TY ++ L
Sbjct: 40 FHAAVAE--PQL----LVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILAR 93
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTII--YFFAEARKLSRAVYVFKYMKNSRNLEC 207
+ + V+ ++++ G + + + +A+ L + + VF M + L
Sbjct: 94 NGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGML-- 151
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
P +++ N + L R +++ I + R ++ MV GI P + + N+M+ +
Sbjct: 152 -PDLKNCNRVLR--LLRDRDSSI-----DVAREVYNVMVECGIRPTVVTYNTMLDSFCKQ 203
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V +AL++ QM + LPN +Y+ L++GL G + A+EL EM R G S+ +
Sbjct: 204 GKVQEALQLLLQMQKM-GCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYT 262
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y+ L+ G+++E + EM+ + +TY T++ +C+ GR +A KLL +
Sbjct: 263 YDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMV 322
Query: 388 NKNLIDG--------YTYTKLLDVLE 405
NKNL+ Y YT+L ++ E
Sbjct: 323 NKNLMPDLVSYNTLIYGYTRLGNIGE 348
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 121/248 (48%), Gaps = 16/248 (6%)
Query: 158 DVVNQMLATPSFCG---TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
DV ++ CG T YNT++ F + K+ A+ + M+ + C P+ +Y
Sbjct: 172 DVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQK---MGCLPNDVTY 228
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N+L G+ +E + L ++M+ G+E ++ + +I+GY +++A
Sbjct: 229 NVLVNGLSHSGE--------LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEAS 280
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R+ +M + +P +Y+ +++GLC GR +AR+L D M K +P SYN+L+
Sbjct: 281 RLGEEM-LSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYG 339
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLID 393
G + E E+ + +TY T++D +CR G AM+L E+ ++ D
Sbjct: 340 YTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPD 399
Query: 394 GYTYTKLL 401
+T+T L+
Sbjct: 400 VFTFTILV 407
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 16/267 (5%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
A TY + R E + +ML+ + T YNTI+Y + ++S A +
Sbjct: 260 AYTYDPLIRGYCEKGQLDEASRLGEEMLSRGA-VPTLVTYNTIMYGLCKWGRVSDARKLL 318
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M N +NL P + SYN L + G I ++ LF ++ G+ P + +
Sbjct: 319 DVMVN-KNL--MPDLVSYNTLIYGYTRLGN---IGEAFL-----LFAELRFRGLVPSVVT 367
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N++I G ++ A+R+ +M + + P+ F++ L+ G C G A+EL DEM
Sbjct: 368 YNTLIDGLCRMGDLDVAMRLKDEM-IKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEM 426
Query: 317 KRKGFVPSSKSY-NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
+G P +Y +V L L G+ + EM+ + P D ITY +D + + G
Sbjct: 427 LNRGLQPDRFAYITRIVGELKL-GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN 485
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
EA +L+K++ L+ D TYT ++
Sbjct: 486 LKEASELVKKMLYNGLVPDHVTYTSII 512
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 129/286 (45%), Gaps = 22/286 (7%)
Query: 136 DASTYHIMTR---KLGAAKMYQEM-DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D T+ I+ R KLG M +E+ D+++N+ L F + + KL
Sbjct: 399 DVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL--------KLGD 450
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
F + P + +YN+ G ++ L K+M+ +G+
Sbjct: 451 PSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN--------LKEASELVKKMLYNGLV 502
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD + S+I ++++ H+ A +F +M + P+ +Y LIH +GR K A
Sbjct: 503 PDHVTYTSIIHAHLMAGHLRKARAVFLEM-LSKGIFPSVVTYTVLIHSYAVRGRLKLAIL 561
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
EM KG P+ +YN+L++ L ++++ K EM K + TY +++E C
Sbjct: 562 HFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENC 621
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDFGNSIRHHL 416
G EA++L K++ ++ + D T++ LL L D+ + + HL
Sbjct: 622 NLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYKSHVVRHL 667
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 114/219 (52%), Gaps = 12/219 (5%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
C E Y T++ F++ ++ A V + M ++ PS+ +YN L GK
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG---FSPSVVTYNALINGHCVTGK- 430
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
ME + + M G+ PD+ S ++++ G+ S V++ALR+ +M V
Sbjct: 431 -------MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM-VEKGIK 482
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P++ +Y LI G C Q RTK A +L +EM R G P +Y +L++A + G++E+ ++
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
EM+EK D +TY +++ + ++ R EA +LL +L
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 149/322 (46%), Gaps = 29/322 (9%)
Query: 98 LPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRF--RHDASTYHIMTR-KL-GAAKM 152
L F E N++ Q D + L+ NWA+ F R T HI+T+ KL A++
Sbjct: 42 LSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQI 101
Query: 153 YQE------MDD-----VVNQMLATPSFC-GTEALYNTIIYFFAEARKLSRAVYVFKYMK 200
E +DD V + T C T ++++ ++ ++ + +A+ + +
Sbjct: 102 LAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQ 161
Query: 201 NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM 260
+ P + SYN + A + +N + E + FK+M+ + P++F+ N +
Sbjct: 162 AHGFM---PGVLSYNAVLDATIRSKRNIS----FAENV---FKEMLESQVSPNVFTYNIL 211
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
I+G+ + +++ AL +F +M LPN +Y+ LI G C + + +L M KG
Sbjct: 212 IRGFCFAGNIDVALTLFDKMET-KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+ SYN +++ L G ++E L EM + +D +TY T++ C+ G +A+
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 381 KLLKELQNKNLIDGY-TYTKLL 401
+ E+ L TYT L+
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLI 352
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + + RK+ FK +++ P++ SYN++ G+ M
Sbjct: 243 YNTLIDGYCKLRKIDDG---FKLLRSMALKGLEPNLISYNVVINGLCREGR--------M 291
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + +M G D + N++IKGY + + AL + H + + P+ +Y
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEMLRHGLTPSVITYTS 350
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIH +C G A E D+M+ +G P+ ++Y +LV + G + E + L EM +
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+TY +++ C G+ +A+ +L++++ K L D +Y+ +L
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T++ F + + A+ V + M +P +Y+ L F + + +Y
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKG---IKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +R G+ PD F+ ++I Y + + AL++ ++M V LP+ +Y
Sbjct: 510 EMLRV--------GLPPDEFTYTALINAYCMEGDLEKALQLHNEM-VEKGVLPDVVTYSV 560
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN---------------SLVSALALNGE 340
LI+GL Q RT+ A+ L ++ + VPS +Y+ SL+ + G
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ E + M+ K D Y ++ CR G +A L KE+
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D TY + + + +E D+ +ML E Y +I + L +A
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDLEKA 539
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M L P + +Y++L + + E R L K + +
Sbjct: 540 LQLHNEMVEKGVL---PDVVTYSVLINGLNKQSRTR-------EAKRLLLKLFYEESVPS 589
Query: 253 DIF--------------SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
D+ S+ S+IKG+ + + +A ++F M + N+ P+ +Y+ +IH
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM-LGKNHKPDGTAYNIMIH 648
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
G C G + A L EM + GF+ + + +LV AL G+V E
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 90/217 (41%), Gaps = 25/217 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++I F E R+ A +++ M + P +Y L A+ G +
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEM---LRVGLPPDEFTYTALINAYCMEGD--------L 536
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA----LRIFHQMGV-----VYNY 286
E L +MV G+ PD+ + + +I G + +A L++F++ V +
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 287 LPNSFSYDY-----LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
+ N + ++ LI G C +G A ++ + M K P +YN ++ G++
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 656
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+ EM++ + +T ++ + + G+ E
Sbjct: 657 RKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 149/342 (43%), Gaps = 50/342 (14%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA 165
+L N+ P L F W S Q FR +Y MT L KM E ++ +++
Sbjct: 72 DLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVS 131
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKN--------SRNLECRPSIRSYNI- 216
+++ +++ EAR ++ VF + N S ++C +R +N+
Sbjct: 132 RKGKNSASSVFTSVL----EARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQ 187
Query: 217 --------LFTAFLSRGKNTYINHVYMETIRC---------------------------L 241
LF + + Y E + C L
Sbjct: 188 IPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLL 247
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F ++ G+ P + S N++I GY S +++ R+ M + P+ F+Y LI+GLC
Sbjct: 248 FGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFM-MENRVFPDVFTYSVLINGLC 306
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+G+ +A +L EM +G VP+ ++ +L++ + G + ++ +M+ K D I
Sbjct: 307 KEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVI 366
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
TY T+++ +C+ G EA KL+ E+ + L D +TYT L+D
Sbjct: 367 TYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLID 408
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 32/257 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I + ++ L + + ++M +R P + +Y++L G+ N +++
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVF---PDVFTYSVLINGLCKEGQLDDANKLFL 319
Query: 236 E----------------------TIRC-----LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
E T R +++QM+ G++PD+ + N++I G
Sbjct: 320 EMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVG 379
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ +A ++ +M P+ F+Y LI G C +G ++A E+ EM ++G + ++
Sbjct: 380 DLREAKKLVIEM-TQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAF 438
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+S G+V E + L EM+E D TY V+ C++G KLLKE+Q
Sbjct: 439 TALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQC 498
Query: 389 KNLIDG-YTYTKLLDVL 404
+ G TY LL+ L
Sbjct: 499 DGHVPGVVTYNVLLNGL 515
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 115/230 (50%), Gaps = 19/230 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +++ + K++ A +F + R L RP++ S+N L + G +
Sbjct: 228 FNVLMHRLCKEHKINEAQLLFGEI-GKRGL--RPTVVSFNTLINGYCKSGN--------L 276
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ L + M+ + + PD+F+ + +I G ++DA ++F +M G+V PN +
Sbjct: 277 DQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLV----PNDVT 332
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ LI+G C GR E+ +M RKG P +YN+L++ L G++ E K + EM
Sbjct: 333 FTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMT 392
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++ D TY ++D C+ G A+++ KE+ + + +D +T L+
Sbjct: 393 QRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + L A + M R L +P +Y +L G +
Sbjct: 368 YNTLINGLCKVGDLREAKKLVIEM-TQRGL--KPDKFTYTMLIDGCCKEGD--------L 416
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E+ + K+MV +GIE D + ++I G+ V +A R +M + P+ +Y
Sbjct: 417 ESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREM-LEAGIKPDDATYTM 475
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+IHG C +G K +L EM+ G VP +YN L++ L G+++ L M+
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 356 RPVDFITYRTVLDEICRRGRAG 377
D ITY +L+ + + G
Sbjct: 536 VVPDDITYNILLERTLQAWKQG 557
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 127/253 (50%), Gaps = 15/253 (5%)
Query: 153 YQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
Y+ +DD +N + + T Y+++I + S A + M + P+
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---INPN 329
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ ++N L AF+ GK ++E + L+ M+ I+PDIF+ NS++ G+ + + +
Sbjct: 330 LVTFNALIDAFVKEGK-------FVEAEK-LYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ A ++F M V + P+ +Y+ LI G C R ++ EL EM +G V + +Y +
Sbjct: 382 DKAKQMFEFM-VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ L +G+ + K +M+ P D +TY +LD +C G+ +A+++ +Q
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 391 L-IDGYTYTKLLD 402
+ +D Y YT +++
Sbjct: 501 IKLDIYIYTTMIE 513
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A+ +K + + + M+ LE + +YNIL F R + +
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQR---LEIVHGLYTYNILINCFCRRSQ--------I 136
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M+ G EP I +L+S++ GY ++DA+ + QM V Y P++ ++
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTT 195
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL + A L D M ++G P+ +Y +V+ L G+ + + L +M +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D + + T++D +C+ +A+ L KE++ K + + TY+ L+ L
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 129/286 (45%), Gaps = 40/286 (13%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+Y DD++ + + F YN+++ F +L +A +F++M + +C
Sbjct: 349 AEKLY---DDMIKRSIDPDIFT-----YNSLVNGFCMHDRLDKAKQMFEFMVSK---DCF 397
Query: 209 PSIRSYNILFTAF-----LSRGKNTY--INH--------VYMETIRCLF----------- 242
P + +YN L F + G + ++H Y I+ LF
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 243 -KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
KQMV+DG+ PDI + + ++ G + + AL +F M L + + Y +I G+C
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL-DIYIYTTMIEGMC 516
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G+ + +L + KG P+ +YN+++S L ++E L +M E +
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
TY T++ R G + +L++E+++ + D T + ++L D
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD 622
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 48/263 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F ++S A+ + M L PSI + + L N Y + +
Sbjct: 123 YNILINCFCRRSQISLALALLGKM---MKLGYEPSIVTLSSLL--------NGYCHGKRI 171
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L QMV G PD + ++I G L N ++A+ + +M V PN +Y
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGV 230
Query: 296 LIHGLCAQGRTK-----------------------------------NARELCDEMKRKG 320
+++GLC +G T +A L EM+ KG
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+ +Y+SL+S L G + + L +MIEK+ + +T+ ++D + G+ EA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 381 KLLKELQNKNL-IDGYTYTKLLD 402
KL ++ +++ D +TY L++
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVN 373
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 12/213 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YN +I F++ + A +F+ M C P++ +YN L + F +G+
Sbjct: 158 VVYNVLIDGFSKKGDMGEAYRLFEEMLEKG---CIPTVFTYNSLLSGFSRKGE------- 207
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
++ LFK M+ G P+IF+ N+++ G+ + +A R+F +M + P+ SY
Sbjct: 208 -FGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL-GCPPDVVSY 265
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L+ G+C++G+ A+ L EM R G P SYN L+ + +G ++ +K +E+ +
Sbjct: 266 NTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPK 325
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D +Y T++D +CR G+ G A + K++
Sbjct: 326 SGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 138/326 (42%), Gaps = 56/326 (17%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
+ F WA Q + H +Y+ + L + + N ML T Y ++
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYT-YGYLL 59
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+A++ A VF+ M C P++ SY+IL A L RG+ ++
Sbjct: 60 RSLCQAQRFEEARSVFRGMAAQ---GCSPNVFSYSILI-AGLCRGQK-------VDEAAE 108
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNYL----- 287
L +M++ G +P++ + S++ G + +A+ +F +M GVVYN L
Sbjct: 109 LLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFS 168
Query: 288 ---------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
P F+Y+ L+ G +G + L +M R+G VP+
Sbjct: 169 KKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++N+L+ G++ E + EM P D ++Y T++ +C +G+ EA +LL+E+
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREM 288
Query: 387 QNKN----------LIDGYTYTKLLD 402
LIDGY+ + LD
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALD 314
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 20/270 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLAT---PSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+Y I+ L + E +++N+M+ P+ Y +++ + KL AV +
Sbjct: 89 SYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNV----VTYGSLLSGLCKMGKLKEAVDL 144
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M C P YN+L F +G E R LF++M+ G P +F
Sbjct: 145 FSRMVYRG---CPPDGVVYNVLIDGFSKKGDMG-------EAYR-LFEEMLEKGCIPTVF 193
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NS++ G+ +F M + +PN F+++ L+ G C G A L E
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDM-LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE 252
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+ G P SYN+L+ + G+ E + L EMI D ++Y ++D + G
Sbjct: 253 MRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
A+KL E+ L D ++Y+ ++D L
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ F + + A +F M R+L C P + SYN L S+GK
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEM---RSLGCPPDVVSYNTLMRGMCSKGKPH------- 279
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R L ++M+ G+ PDI S N +I GY S ++ A+++F+++ P++FSY
Sbjct: 280 EAQR-LLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI-PKSGLEPDAFSYST 337
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC G+ A + +M G P + LV L + E+ + M++ +
Sbjct: 338 IIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE 397
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
Y ++ ++C+ R+ + ++ EL + +K++
Sbjct: 398 CVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVI 443
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D +Y+ + R + + E ++ +M+ S G + + YN +I ++++ L A+
Sbjct: 261 DVVSYNTLMRGMCSKGKPHEAQRLLREMIR--SGVGPDIVSYNILIDGYSKSGALDHAIK 318
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+F + S LE P SY+ + GK + ++ +FK M+ +G PD
Sbjct: 319 LFYEIPKS-GLE--PDAFSYSTIIDCLCRAGK---VGAAFV-----VFKDMIANGSAPDA 367
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ ++ G + ++ +F M V + +P Y+ L++ LC R+ + E+
Sbjct: 368 AVVIPLVIGLCRGERLTESCELFQAM-VKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFH 426
Query: 315 EMKRKGFVP 323
E+ +GF P
Sbjct: 427 ELTERGFSP 435
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 38/178 (21%)
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIH----------------------------------- 298
+ F G +Y + SY+YL+
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
LC R + AR + M +G P+ SY+ L++ L +V+E + L EMI+
Sbjct: 61 SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFGNSIR 413
+ +TY ++L +C+ G+ EA+ L + + DG Y L+D + D G + R
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 126/258 (48%), Gaps = 17/258 (6%)
Query: 133 FRHDAS----TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
RH S TY + + A + ++QM C E Y T++ F++
Sbjct: 337 LRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM-RVRGLCPNERTYTTLVDGFSQKGY 395
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
++ A V K M ++ PS+ +YN L GK M + + M
Sbjct: 396 MNEAYRVLKEMIDNG---FSPSVVTYNALINGHCIAGK--------MVDAIAVLEDMKEK 444
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+ PD+ S ++++ G+ S V++ALR+ +M V P++ +Y LI G C Q RTK
Sbjct: 445 GLTPDVVSYSTVLSGFCRSYDVDEALRVKRKM-VAKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L DEM R G P +Y +L++A + G++++ ++ EM+EK D +TY +++
Sbjct: 504 ACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 369 EICRRGRAGEAMKLLKEL 386
+ ++ R EA +LL +L
Sbjct: 564 GLNKQARTREAKRLLLKL 581
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + + RK+ + + M + LE P++ SYN++ G+ M
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMA-LKGLE--PNLISYNVVINGLCREGR--------M 291
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ I + +M G D + N++IKGY + + AL + H + + P+ +Y
Sbjct: 292 KEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEMLRHGLSPSVITYTS 350
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIH +C G A E D+M+ +G P+ ++Y +LV + G + E + L EMI+
Sbjct: 351 LIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+TY +++ C G+ +A+ +L++++ K L D +Y+ +L
Sbjct: 411 FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVL 457
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 146/322 (45%), Gaps = 29/322 (9%)
Query: 98 LPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRF--RHDASTYHIMTR--------K 146
L F E N++ Q + + L+ WA+ F R T HI+TR
Sbjct: 42 LSANFTPEAASNLLLKSQNNQELILKFLTWANPHQFFTLRCKCITLHILTRFKLYKTAQT 101
Query: 147 LGAAKMYQEMDD-----VVNQMLATPSFC-GTEALYNTIIYFFAEARKLSRAVYVFKYMK 200
L + +DD V + T C T ++++ ++ ++ + +A+ +
Sbjct: 102 LAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHL-- 159
Query: 201 NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM 260
S+ P + SYN + A + +N + E + FK+M+ + P++F+ N +
Sbjct: 160 -SQAHGFMPGVLSYNAVLDATIRSKRNIS----FAENV---FKEMLQSQVSPNVFTYNIL 211
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
I+G+ L+ +++ ALR F +M LPN +Y+ LI G C + + EL M KG
Sbjct: 212 IRGFCLAGNLDVALRFFDRMEK-KGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKG 270
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+ SYN +++ L G ++E L EM ++ +D +TY T++ C+ G +A+
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 381 KLLKELQNKNLIDGY-TYTKLL 401
+ E+ L TYT L+
Sbjct: 331 VMHAEMLRHGLSPSVITYTSLI 352
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D TY + + + +E D+ ++ML E Y +I + L +A
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRV-GLPPDEFTYTALINAYCMEGDLQKA 539
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M L P + +Y++L + + E R L K + +
Sbjct: 540 IQLHNEMVEKGVL---PDVVTYSVLINGLNKQARTR-------EAKRLLLKLFYEESVPS 589
Query: 253 DIF--------------SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
D+ S+ S+IKG+ + + +A ++F M + N+ P+ +Y+ +IH
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM-LEKNHKPDGTAYNVMIH 648
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
G C G + A L EM + GF+ + + +LV L G+V E
Sbjct: 649 GHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNE 693
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++I F E R+ A +F M + P +Y L A+ G +
Sbjct: 488 YSSLIQGFCEQRRTKEACDLFDEM---LRVGLPPDEFTYTALINAYCMEGD--------L 536
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA----LRIFHQMGV-----VYNY 286
+ L +MV G+ PD+ + + +I G +A L++F++ V +
Sbjct: 537 QKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 287 LPNSFSYDY-----LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
+ N + ++ LI G C +G A ++ + M K P +YN ++ G++
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDI 656
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+ EM++ + +T ++ + + G+ E
Sbjct: 657 RKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNE 693
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 127/253 (50%), Gaps = 15/253 (5%)
Query: 153 YQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
Y+ +DD +N + + T Y+++I + S A + M + P+
Sbjct: 235 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---INPN 291
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ ++N L AF+ GK ++E + L+ M+ I+PDIF+ NS++ G+ + + +
Sbjct: 292 LVTFNALIDAFVKEGK-------FVEAEK-LYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 343
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ A ++F M V + P+ +Y+ LI G C R ++ EL EM +G V + +Y +
Sbjct: 344 DKAKQMFEFM-VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 402
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ L +G+ + K +M+ P D +TY +LD +C G+ +A+++ +Q
Sbjct: 403 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 462
Query: 391 L-IDGYTYTKLLD 402
+ +D Y YT +++
Sbjct: 463 IKLDIYIYTTMIE 475
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A+ +K + + + M+ LE + +YNIL F R + +
Sbjct: 50 FNKLLSAIAKMKKFDVVISLGEKMQR---LEIVHGLYTYNILINCFCRRSQ--------I 98
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M+ G EP I +L+S++ GY ++DA+ + QM V Y P++ ++
Sbjct: 99 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTT 157
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL + A L D M ++G P+ +Y +V+ L G+ + + L +M +
Sbjct: 158 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 217
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D + + T++D +C+ +A+ L KE++ K + + TY+ L+ L
Sbjct: 218 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 129/286 (45%), Gaps = 40/286 (13%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+Y DD++ + + F YN+++ F +L +A +F++M + +C
Sbjct: 311 AEKLY---DDMIKRSIDPDIFT-----YNSLVNGFCMHDRLDKAKQMFEFMVSK---DCF 359
Query: 209 PSIRSYNILFTAF-----LSRGKNTY--INH--------VYMETIRCLF----------- 242
P + +YN L F + G + ++H Y I+ LF
Sbjct: 360 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 419
Query: 243 -KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
KQMV+DG+ PDI + + ++ G + + AL +F M L + + Y +I G+C
Sbjct: 420 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL-DIYIYTTMIEGMC 478
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G+ + +L + KG P+ +YN+++S L ++E L +M E +
Sbjct: 479 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 538
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
TY T++ R G + +L++E+++ + D T + ++L D
Sbjct: 539 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD 584
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 48/263 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F ++S A+ + M L PSI + + L N Y + +
Sbjct: 85 YNILINCFCRRSQISLALALLGKM---MKLGYEPSIVTLSSLL--------NGYCHGKRI 133
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L QMV G PD + ++I G L N ++A+ + +M V PN +Y
Sbjct: 134 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGV 192
Query: 296 LIHGLCAQGRTK-----------------------------------NARELCDEMKRKG 320
+++GLC +G T +A L EM+ KG
Sbjct: 193 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 252
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+ +Y+SL+S L G + + L +MIEK+ + +T+ ++D + G+ EA
Sbjct: 253 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 312
Query: 381 KLLKELQNKNL-IDGYTYTKLLD 402
KL ++ +++ D +TY L++
Sbjct: 313 KLYDDMIKRSIDPDIFTYNSLVN 335
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 21/320 (6%)
Query: 83 KPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHI 142
KP D Q R ++S P + +LC ++ L D +ELF A Q + H ++
Sbjct: 48 KP-FDLKQLRRSLSLTP--ISPFQLCKLLELPLDIPTSMELFQRAGAQKGYSHTFDACYL 104
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS 202
+ KLGA ++ ++ ++ QM E+L+ I+ + +A +A + M
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQM-KDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGV 163
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
+ C P+ +SYN++ + +V F M++ G+ P +++ ++K
Sbjct: 164 YS--CDPTFKSYNVVLDILVDGDCPRVAPNV--------FYDMLSRGVSPTVYTFGVVMK 213
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
+ + V+ A + M + +PNS Y LIH LC R A +L ++M
Sbjct: 214 ALCMVSEVDSACSLLRDMA-KHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCE 272
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P +++N ++ L G + E K L M+ + D +TY ++ +CR G+ EA L
Sbjct: 273 PDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL 332
Query: 383 LKELQNKN------LIDGYT 396
L ++ N N LI GY
Sbjct: 333 LNKIPNPNTVLYNTLISGYV 352
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 130/283 (45%), Gaps = 17/283 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LEL N + RF + TY I+ +E ++VN M A T YN +I
Sbjct: 397 LELLNEMVAK-RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVG-YNCLI 454
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ + A+ +F M C+P I ++N L K ME
Sbjct: 455 CALCKDGNIEEALQLFGEMSGKG---CKPDIYTFNSLINGLCKNHK--------MEEALS 503
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHG 299
L+ M +G+ + + N+++ +++ + + A ++ +M ++ P ++ +Y+ LI
Sbjct: 504 LYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEM--LFRGCPLDNITYNGLIKA 561
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC G + L +EM KG P+ S N L+S L G+V + +K L +MI + D
Sbjct: 562 LCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPD 621
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+TY ++++ +C+ G EA L +LQ++ + D TY L+
Sbjct: 622 IVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 126/267 (47%), Gaps = 17/267 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D T++ + L A E ++++ML F Y +++ ++ A +
Sbjct: 274 DVQTFNDVIHGLCRAGRIHEAAKLLDRMLLR-GFSTDALTYGYLMHGLCRMGQVDEARAL 332
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ N P+ YN L + +++ G+ + E L+ MV G EPD +
Sbjct: 333 LNKIPN-------PNTVLYNTLISGYVASGR-------FEEAKDLLYNNMVIAGYEPDAY 378
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N MI G + ++ AL + ++M V + PN +Y LI+G C QGR + A E+ +
Sbjct: 379 TFNIMIDGLVKKGYLVSALELLNEM-VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNS 437
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M KG ++ YN L+ AL +G +EE ++ EM K D T+ ++++ +C+ +
Sbjct: 438 MSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHK 497
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
EA+ L ++ + +I + TY L+
Sbjct: 498 MEEALSLYHDMFLEGVIANTVTYNTLV 524
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 133/297 (44%), Gaps = 29/297 (9%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSR 191
R + T + + A M E+D + + +A +Y T+I+ E ++S
Sbjct: 199 RGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSE 258
Query: 192 AVYVFKYMKNSRNLECRPSIRSYN----------------ILFTAFLSRGKNT-YINHVY 234
A+ + +++ + C P ++++N L L RG +T + + Y
Sbjct: 259 AL---QLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGY 315
Query: 235 METIRCLFKQ------MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
+ C Q ++N P+ N++I GY+ S +A + + V+ Y P
Sbjct: 316 LMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEP 375
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
++++++ +I GL +G +A EL +EM K F P+ +Y L++ G +EE + +
Sbjct: 376 DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIV 435
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
M K ++ + Y ++ +C+ G EA++L E+ K D YT+ L++ L
Sbjct: 436 NSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGL 492
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+++ F + +A FK + C +YN L A G +
Sbjct: 520 YNTLVHAFLMRDSIQQA---FKLVDEMLFRGCPLDNITYNGLIKALCKTGA--------V 568
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF++M+ GI P I S N +I G + VNDAL+ M + P+ +Y+
Sbjct: 569 EKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDM-IHRGLTPDIVTYNS 627
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC G + A L ++++ +G P + +YN+L+S G + L++ ++
Sbjct: 628 LINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSG 687
Query: 356 RPVDFITYRTVLDEICRR 373
+ +T+ +++ I ++
Sbjct: 688 FIPNEVTWSILINYIVKK 705
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 136/270 (50%), Gaps = 22/270 (8%)
Query: 140 YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYM 199
Y+ + + K+ E D+ ++M++ Y+ +I F KL+ A+ +F
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISK-GISPDVVTYSALISGFCILGKLNDAIDLF--- 283
Query: 200 KNSRNLE-CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
N LE +P + ++NIL AF GK M+ + +F M+ GI+P+ + N
Sbjct: 284 -NKMILENIKPDVYTFNILVNAFCKDGK--------MKEGKTVFDMMMKQGIKPNFVTYN 334
Query: 259 SMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S++ GY L VN A IF+ M GV P+ SY +I+G C + A L E
Sbjct: 335 SLMDGYCLVKEVNKAKSIFNTMAQGGVN----PDIQSYSIMINGFCKIKKFDEAMNLFKE 390
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M RK +P +Y+SL+ L+ +G + ++ + +M ++ P TY ++LD +C+ +
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQ 450
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+A+ LL +L++K + + YTY+ L+ L
Sbjct: 451 VDKAIALLTKLKDKGIQPNMYTYSILIKGL 480
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ + NIL F G + V+ + ++ G PD + ++IKG L
Sbjct: 117 KPNLVNCNILINCFCQLGLIPFAFSVFAKILKM--------GYVPDTITFTTLIKGLCLK 168
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ A +FH V + + SY LIHGLC G T+ A +L + P+
Sbjct: 169 GQIQQAF-LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN+++ ++ V E EMI K D +TY ++ C G+ +A+ L ++
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287
Query: 388 NKNL-IDGYTYTKLLDVLEDD 407
+N+ D YT+ L++ D
Sbjct: 288 LENIKPDVYTFNILVNAFCKD 308
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 14/223 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +Y IM K + E ++ +M + Y+++I +++ ++S A+ +
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEM-HRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M + P+IR+YN + A I+ V + L ++ + GI+P+++
Sbjct: 423 VDQMHDRG---VPPTIRTYNSILDALCK------IHQV--DKAIALLTKLKDKGIQPNMY 471
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ + +IKG S + DA ++F + +V + N +Y +I G C +G A L +
Sbjct: 472 TYSILIKGLCQSGKLEDARKVFEGL-LVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSK 530
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ-RP 357
M+ G +P +K+Y ++ +L E + K L EMI + RP
Sbjct: 531 MEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 144/317 (45%), Gaps = 19/317 (5%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+ R + L PR +C V+ Q+D + L+ F WA +Q R+RHDA Y+ M L
Sbjct: 152 EENLRHLLRSLNPRL----VCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDIL 207
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
++ Q ++ M EA ++ ++ ++ A L A+ + M+ +
Sbjct: 208 SKTRLCQGARRILRLMTRRGIERSPEA-FSYVMVSYSRAGMLRNALRILTLMQKA---GV 263
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
P + N + K +E ++M GIEPDI S N +IKGY
Sbjct: 264 EPDLSICNTAIYVLVKGNK--------LEKALRFLERMKVAGIEPDIVSYNCLIKGYCDV 315
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM-KRKGFVPSSK 326
+ ++DAL + +M P+ SY ++ LC + + + L + M + +P
Sbjct: 316 HRIDDALELIAEMP-FKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQV 374
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN+L+ AL+ +G ++ + L E EK +D + Y V+D C+ +A L+ ++
Sbjct: 375 TYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDM 434
Query: 387 QNKNL-IDGYTYTKLLD 402
+K D TYT ++D
Sbjct: 435 YSKGCNPDVVTYTAIID 451
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 130/306 (42%), Gaps = 50/306 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY-------------F 182
D +Y+ + L + +E+ ++ M+ + + YNT+IY F
Sbjct: 336 DKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVF 395
Query: 183 FAEAR-------KLSRAVYVFKYMKNSRNLE-------------CRPSIRSYNILFTAFL 222
EA K+ + V + KN +N++ C P + +Y + F
Sbjct: 396 LREAEEKGFHIDKVGYSAVVDSFCKN-KNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFC 454
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV 282
GK ++ + + +QM G +P+ + ++ G H +L + V
Sbjct: 455 RVGK--------IDEAKKMLQQMYKHGCKPNTVTYTVLLNGLC---HNGKSLEAREMINV 503
Query: 283 V--YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
+ + PN+ +Y ++HGL +G+ A +L EM KGF+P+ N L+ +L N
Sbjct: 504 SEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQN 563
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE--LQNKNLIDGYTYT 398
V K L E + K V+ + + +V+ C+ G A+ +L++ L NK+ D TYT
Sbjct: 564 VVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKH-PDAITYT 622
Query: 399 KLLDVL 404
L D L
Sbjct: 623 TLFDAL 628
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 22/268 (8%)
Query: 139 TYHIMTRKL---GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY ++ L G + +EM +V + TP+ Y+ +++ KLS A +
Sbjct: 480 TYTVLLNGLCHNGKSLEAREMINVSEEHWWTPN----AITYSAVMHGLRREGKLSEACDL 535
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M L P+ N+L + L R +N Y+E CL K G ++
Sbjct: 536 TREMIEKGFL---PNPVDINLLIQS-LCRNQNVVGAKKYLE--ECLHK-----GCAVNVV 584
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ S+I G+ ++ AL + M + N P++ +Y L L + R A EL +
Sbjct: 585 NFTSVIYGFCQIGDLDAALSMLEDM-YLSNKHPDAITYTTLFDALGKKSRLDEASELIVK 643
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M KG P+ +Y +++ G V++ +K L +MI +Q P + Y V++++C G
Sbjct: 644 MLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ-PFKTV-YNQVIEKLCYFGN 701
Query: 376 AGEAMKLL-KELQNKNLIDGYTYTKLLD 402
EA KLL K L+ + +D T L++
Sbjct: 702 REEAEKLLGKVLRTASKLDAKTCHILIE 729
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 22/245 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++++ + + M NS+ L P + ++ + A GK T + +
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKIL---PDVVIFSTVVDALCKEGKVTEAHEIV- 289
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
M+ G+EPD+ + +++ G+ L + +++A+++F M V + P+ SY
Sbjct: 290 -------DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM-VRKGFAPDVISYTT 341
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C + A L +EM RK ++P +K+YN+L+ L G +++ + EM+ +
Sbjct: 342 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARG 401
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVLE 405
+ D +TY +LD +C+ EAM LLK ++ NL IDG L+
Sbjct: 402 QMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAAR 461
Query: 406 DDFGN 410
D F N
Sbjct: 462 DLFSN 466
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 13/256 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + L ++ + ++NQM+ + +++T++ + K++ A +
Sbjct: 230 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDV-VIFSTVVDALCKEGKVTEAHEI 288
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M R +E P + +Y L + + M+ +F MV G PD+
Sbjct: 289 VDMMIQ-RGVE--PDVVTYTTLMDGHCLQSE--------MDEAVKVFDMMVRKGFAPDVI 337
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S ++I GY + ++ A+ +F +M ++P++ +Y+ L+HGLC GR ++A L E
Sbjct: 338 SYTTLINGYCKIHKIDKAMYLFEEM-CRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +G +P +Y+ L+ +L N +EE + L + D Y ++D +CR G
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 456
Query: 376 AGEAMKLLKELQNKNL 391
A L L +K L
Sbjct: 457 LEAARDLFSNLSSKGL 472
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 120/275 (43%), Gaps = 18/275 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
D TY T + + EMD+ V M+ F Y T+I + + K+ +A+
Sbjct: 300 DVVTY---TTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 356
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
Y+F+ M E P ++YN L G+ ++ LF +MV G PD
Sbjct: 357 YLFEEMCRK---EWIPDTKTYNTLMHGLCHVGR--------LQDAIALFHEMVARGQMPD 405
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + + ++ + H+ +A+ + + N P+ Y+ +I G+C G + AR+L
Sbjct: 406 LVTYSILLDSLCKNCHLEEAMALLKAIEA-SNLNPDIQVYNIIIDGMCRAGELEAARDLF 464
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+ KG PS +YN ++ L G + E K EM D TY T+ +
Sbjct: 465 SNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQN 524
Query: 374 GRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
A++LL+E+ + D T T L+++L DD
Sbjct: 525 NETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDD 559
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 10/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PSI + L T+ +++ K + T+ L QM + G+ P++++LN +I + N
Sbjct: 54 PSIVDFAKLLTS-IAKMK-------HYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLN 105
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V A + ++ + + P+ ++ LI GLC +G+ A L D+M +GF P+ +Y
Sbjct: 106 RVGFAFSVLAKI-LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTY 164
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L++ L G ++ L M + D + Y +++D +C+ + EA L ++
Sbjct: 165 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVG 224
Query: 389 KNL-IDGYTYTKLLDVL 404
+ + D +TYT L+ L
Sbjct: 225 QGISPDIFTYTSLVHAL 241
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+I K+ A+++F M + +P++ +Y L G +
Sbjct: 129 FTTLIRGLCVEGKIGEALHLFDKMIDEG---FQPNVVTYGTLINGLCKVGNTS------- 178
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
IR L + M +PD+ S+I V +A +F QM V P+ F+Y
Sbjct: 179 AAIR-LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQM-VGQGISPDIFTYTS 236
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+H LC K+ L ++M +P ++++V AL G+V E + + MI++
Sbjct: 237 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 296
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +TY T++D C + EA+K+ + K D +YT L++
Sbjct: 297 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLIN 344
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 156/341 (45%), Gaps = 22/341 (6%)
Query: 66 LSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFN 125
L R R + +RS ++K D R + L PR ++C V+ LQ D + L+ F
Sbjct: 72 LVREVCRLIERRSAWNAKLEGD---LRRLLRSLKPR----QVCAVLQLQSDERIALDFFY 124
Query: 126 WASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
WA +Q R+RHD Y++M + L K+ Q V+ M+ EA + ++ ++
Sbjct: 125 WAGRQWRYRHDPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVS-YSR 183
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
A KL A+ V M+ + P++ N + K +E ++M
Sbjct: 184 AGKLRNAMQVLTMMQKA---GVEPNLLICNTAIHVLVMANK--------LEKALRFLERM 232
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
GI P++ + N +IKGY V A+ + +M P+ SY ++ LC R
Sbjct: 233 QLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMP-FKGCPPDKVSYYTVMGFLCQDKR 291
Query: 306 TKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
K R L ++M K P +YN+LV L+ +G +E ++ L E E+ VD + Y
Sbjct: 292 IKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYS 351
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+++ C +GR A +++ E+ K D TYT +++ L
Sbjct: 352 AIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGL 392
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 113/286 (39%), Gaps = 34/286 (11%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSR 191
F+ D Y + ++VN+M+ C + + Y ++ + K+
Sbjct: 343 FQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKG--CSPDVVTYTAVVNGLCKVGKVEE 400
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG------------------KNTYINHV 233
A + + M C+P+ SY L G N V
Sbjct: 401 AKKMLQQMYKH---GCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSV 457
Query: 234 YMETIR--------C-LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
M +R C + ++M+ G P +N +IK L +N+A + F + +
Sbjct: 458 VMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKK-FMEECLNR 516
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
N+ ++ +IHG C A L D+M P + ++ +++ AL G +EE
Sbjct: 517 GCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEA 576
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+M++K +TYR V+ + C+ GR E +KLL ++ +++
Sbjct: 577 TVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRS 622
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 15/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +++ KLS A V + M P+ N+L + K M
Sbjct: 455 YSVVMHGLRREGKLSEACDVVREMLTKGFF---PTPVEINLLIKSLCLEQK--------M 503
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ ++ +N G + + ++I G+ S++++ AL + M + N P++ ++
Sbjct: 504 NEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDM-YLNNKHPDAVTFTA 562
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I L +GR + A +M +KG P+ +Y +++ G VEE +K L +M+ +
Sbjct: 563 IIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRS 622
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLK-ELQNKNLIDGYTYTKLLD 402
+ Y V++++C G A K++ L+ + ID T L++
Sbjct: 623 KC--RTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLME 668
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 174/397 (43%), Gaps = 54/397 (13%)
Query: 57 LCSCYSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNN---EELCNVMTL 113
+C C + S SSR G S S + A + PPR E++ + +
Sbjct: 86 VCCCSGVLGGSPPSSRTAGVSSPGLSASRPSKRRIGRARVQPPPRDERRAAEDVIHALRS 145
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIM---TRKLGAAKMYQEMDDVVNQMLATPSF- 169
+ P LE F A+++PR H ++ + M R G E+ DV+ + + +
Sbjct: 146 ADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVG 205
Query: 170 --------CGTEA----------------------LYNTIIYFFAEARKLSRAVYVFKYM 199
G E YN ++YF ++ A+ V+K M
Sbjct: 206 TFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVM 265
Query: 200 KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNS 259
+ PS+R+Y++L AF R +ET+ L ++M G++P+++S
Sbjct: 266 MVDGVV---PSVRTYSVLMVAFGKRRD--------VETVLWLLREMEAHGVKPNVYSYTI 314
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
I+ + ++A RI +M P+ ++ LI LC GR +A+++ +MK+
Sbjct: 315 CIRVLGQARRFDEAYRILAEM-ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKS 373
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD-FITYRTVLDEICRRGRAGE 378
P +Y +L+ A NGE ++V +W ++ D + Y V+D +C+ GR E
Sbjct: 374 DQKPDRVTYITLLDKFADNGE-SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFE 432
Query: 379 AMKLLKELQNKNLI-DGYTYTKLLD--VLEDDFGNSI 412
A+++ E++ K ++ + Y+Y L+ + D FG+++
Sbjct: 433 ALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 469
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 42/264 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+++ +G + +EM V +M + T YNTII ++R+L +A+ +
Sbjct: 868 DEFTYNLLLDAMGKSMRIEEMLKVQEEM-HRKGYESTYVTYNTIISGLVKSRRLEQAIDL 926
Query: 196 F-------------------------KYMKNSRNL-------ECRPSIRSYNILFTAFLS 223
+ ++++ NL C+ + YNIL
Sbjct: 927 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 986
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
G + H LF+ MV+ GI PDI S +I + +ND L F Q+ +
Sbjct: 987 AGNTEKVCH--------LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQL-LE 1037
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
P+ +Y+ LI GL R + A L +EM++KG VP+ +YNSL+ L G+ E
Sbjct: 1038 MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1097
Query: 344 TVKNLWEMIEKQRPVDFITYRTVL 367
K E++ K + TY ++
Sbjct: 1098 AGKMYEELLTKGWKPNVFTYNALI 1121
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 116/270 (42%), Gaps = 45/270 (16%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYM--------------- 199
EM D + Q P + YN++I F +A + A+ +FKYM
Sbjct: 435 EMFDEMKQKGIVPE----QYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLF 490
Query: 200 -----KNSRNLEC------------RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
K+ +++ P + + N + G+ V+ E
Sbjct: 491 INYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHE-----L 545
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
K M G+ PD + MIK ++ ++A++IF+ M + N +P+ + LI L
Sbjct: 546 KAM---GVSPDTITYTMMIKCCSKASKFDEAVKIFYDM-IENNCVPDVLVVNSLIDTLYK 601
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
GR A ++ ++K P+ +YN+L++ L G+V+E + L EM P + IT
Sbjct: 602 AGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLIT 661
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
Y T+LD +C+ G +A+ +L + K I
Sbjct: 662 YNTILDCLCKNGAVNDALDMLYSMTTKGCI 691
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 133/327 (40%), Gaps = 70/327 (21%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI-IYFFAEARKLSRAVYVFK 197
+Y I R LG A+ + E ++ +M C + + +T+ I +A ++S A VF
Sbjct: 311 SYTICIRVLGQARRFDEAYRILAEM--ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFW 368
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV---------------YMETIRCL- 241
MK S +P +Y L F G++ + + Y I L
Sbjct: 369 KMKKSDQ---KPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALC 425
Query: 242 -----------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV-------- 282
F +M GI P+ +S NS+I G++ ++ DAL +F M +
Sbjct: 426 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGY 485
Query: 283 ----VYNY----------------------LPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
NY +P+ + + ++ GL GR A+ + E+
Sbjct: 486 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 545
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
K G P + +Y ++ + + +E VK ++MIE D + +++D + + GR
Sbjct: 546 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRG 605
Query: 377 GEAMKLLKELQNKNL--IDGYTYTKLL 401
EA ++ +L+ NL DG TY LL
Sbjct: 606 DEAWQIFYQLKEMNLEPTDG-TYNTLL 631
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 13/220 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +++ A++ +L A VF +K + P +Y ++ K + E
Sbjct: 523 NAVLFGLAKSGRLGMAKRVFHELKA---MGVSPDTITYTMMIKCCSKASK-------FDE 572
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
++ +F M+ + PD+ +NS+I + ++A +IF+Q+ + N P +Y+ L
Sbjct: 573 AVK-IFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEM-NLEPTDGTYNTL 630
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ GL +G+ K L +EM + P+ +YN+++ L NG V + + L+ M K
Sbjct: 631 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 690
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
D +Y TV+ + + R EA + +++ K LI Y
Sbjct: 691 IPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYA 729
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YN++I + + A +F MK L C P +YN+L A +
Sbjct: 837 YNSLICGLVDENLIDIAEGLFAEMKE---LGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE 893
Query: 227 --------------NTYINHVY----METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
NT I+ + +E L+ +++ G P + ++ G + +
Sbjct: 894 EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 953
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ DA +F++M + Y N Y+ L++G G T+ L +M +G P KSY
Sbjct: 954 RIEDAENLFNEM-LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSY 1012
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
++ L G++ + + +++E D ITY ++D + + R EA+ L E+Q
Sbjct: 1013 TIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQK 1072
Query: 389 KNLIDG-YTYTKLL 401
K ++ YTY L+
Sbjct: 1073 KGIVPNLYTYNSLI 1086
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L K+ + G+ S NS+I G + N ++ A +F +M + P+ F+Y+ L+ +
Sbjct: 821 LVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKEL-GCGPDEFTYNLLLDAM 879
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
R + ++ +EM RKG+ + +YN+++S L + +E+ + + ++ +
Sbjct: 880 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 939
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL 386
TY +LD + + GR +A L E+
Sbjct: 940 CTYGPLLDGLLKAGRIEDAENLFNEM 965
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 104/257 (40%), Gaps = 32/257 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKN------SRNLECRPSIRSYNILFTA-------FL 222
YNT+IY + + + A +F MK + PS ++ A FL
Sbjct: 697 YNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFL 756
Query: 223 SRGKNTYIN--HVYMETI--------RCLFKQMV-NDGIEPDIFSLNSMIKGYILSNHVN 271
G T + H ME I F +++ + GI D F L +IK
Sbjct: 757 QPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKAL 816
Query: 272 DA---LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+A ++ F GV + SY+ LI GL + A L EMK G P +Y
Sbjct: 817 EAHELVKKFKSFGVSL----KTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTY 872
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N L+ A+ + +EE +K EM K ++TY T++ + + R +A+ L L +
Sbjct: 873 NLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 932
Query: 389 KNL-IDGYTYTKLLDVL 404
+ TY LLD L
Sbjct: 933 QGFSPTPCTYGPLLDGL 949
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 54/233 (23%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKL 189
F TY + L A ++ +++ N+ML G +A +YN ++ A
Sbjct: 935 FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEY----GCKANCTIYNILLNGHRIAGNT 990
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVYMETIRCLFKQMVND 248
+ ++F+ M + P I+SY I+ G+ N + + F+Q++
Sbjct: 991 EKVCHLFQDMVDQG---INPDIKSYTIIIDTLCKAGQLNDGLTY---------FRQLLEM 1038
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV-----YNYL------------- 287
G+EPD+ + N +I G S + +A+ +F++M G+V YN L
Sbjct: 1039 GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEA 1098
Query: 288 -------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
PN F+Y+ LI G G T +A M G +P+S +
Sbjct: 1099 GKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1151
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 140 YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYM 199
Y+ + L K+ D+ ++M+ F Y T+IY +L AV +F M
Sbjct: 207 YNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDV-VTYTTLIYGCLIVGRLKEAVGLFNQM 265
Query: 200 --KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
KN +P + ++NIL G+ M+ R + M+ G++ +I +
Sbjct: 266 LLKN-----IKPDVYTFNILVDGLCKEGE--------MKKARNVLAVMIKQGVDSNIVTY 312
Query: 258 NSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
NS++ GY L N A +F+ M GV P+ SY +I+GLC A L
Sbjct: 313 NSLMDGYFLVKQENKATFVFNTMARRGVT----PDVQSYSIMINGLCKTKMVDEAVNLFK 368
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM K P++ +YNSL+ L G + + + EM + +P D ITY ++LD +C+
Sbjct: 369 EMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNH 428
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +A+ L+ +++++ + + YTYT L+D L
Sbjct: 429 QVDKAITLITKIKDQGIQPNIYTYTILVDGL 459
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 106/214 (49%), Gaps = 18/214 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I + + + AV +FK M +S+++ P+ +YN L L G+ +
Sbjct: 347 YSIMINGLCKTKMVDEAVNLFKEM-HSKSMA--PNTVTYNSLIDGLLKYGR--------I 395
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
L +M N G D+ + +S++ ++ V+ A+ + ++ G+ PN ++
Sbjct: 396 SDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQ----PNIYT 451
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y L+ GLC GR K+A+ + ++ KG+ K YN +V+ L G +E + + +M
Sbjct: 452 YTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKME 511
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ D +TY T++ + + +A+KLL+E+
Sbjct: 512 DNGCIPDAVTYETLVRALFENDKNDKAVKLLREM 545
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 51/236 (21%)
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+ +P + ++NIL F G ++N + + +FK G PD ++ ++IKG
Sbjct: 94 QIQPDLFTFNILINCFCHLG---HLNFAF-SVLAKIFKL----GFHPDTVTITTLIKGLC 145
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK------------------ 307
L+ V +AL FH + + + SY LI+GLC G T+
Sbjct: 146 LNGKVREALH-FHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNV 204
Query: 308 -----------------NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+A +LC EM K P +Y +L+ + G ++E V +
Sbjct: 205 VMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQ 264
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL----KELQNKNLIDGYTYTKLLD 402
M+ K D T+ ++D +C+ G +A +L K+ + N++ TY L+D
Sbjct: 265 MLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIV---TYNSLMD 317
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
++P IF N ++ + NH + A+ QM + P+ F+++ LI+ C G A
Sbjct: 61 VQP-IFEFNKILSSLVKLNHFHTAISFSKQMEL-KQIQPDLFTFNILINCFCHLGHLNFA 118
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+ ++ + GF P + + +L+ L LNG+V E + ++I K +D ++Y T+++
Sbjct: 119 FSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLING 178
Query: 370 ICRRGRAGEAMKLLKEL 386
+C+ G A+++L+++
Sbjct: 179 LCKTGETRAALQVLRKI 195
>gi|357140623|ref|XP_003571864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Brachypodium distachyon]
Length = 751
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 136/287 (47%), Gaps = 15/287 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L+ F +A ++ FR + +T+ ++ L + +M ++ + + S EA ++
Sbjct: 124 LQFFRFAYRRAGFRPEPATFSLLIPVLASNRMLNHARCILLETMPAFSVSPDEATVAALV 183
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ +AR AV +F+ M L + SYN + A L RG+ +Y
Sbjct: 184 AAYGKARIPQEAVKLFRLMPE---LGITRTALSYNAVLKAILCRGREAMARRIY------ 234
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
M+ DG+ PD+ + N++I G+ LS + A+R+F M + P+ +Y+ LI+
Sbjct: 235 --NAMIADGVAPDLSTYNTLIWGFGLSEKMEAAVRVFGDMKG-HGVTPDVTTYNNLINAW 291
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
G ++AR++ DEM GF +S SYN ++ +VEE V EM EK
Sbjct: 292 VRNGDLESARKVFDEMPGAGFERNSVSYNVMIKGYVEAKKVEEAVGLFKEMGEKGLRSSE 351
Query: 361 ITYRTVLDEIC-RRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVL 404
T+ ++ +C +GR EA K ++++ + L D + +L+ L
Sbjct: 352 KTFAALMPGLCDDQGRTAEARKAVEDMAERRLTPKDKTVFLRLVTTL 398
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 20/236 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + EA+K+ AV +FK M +RS F A + +
Sbjct: 319 YNVMIKGYVEAKKVEEAVGLFKEMGEK-------GLRSSEKTFAALMP---GLCDDQGRT 368
Query: 236 ETIRCLFKQMVNDGIEP-DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
R + M + P D ++ + ++ AL + + G + L + Y
Sbjct: 369 AEARKAVEDMAERRLTPKDKTVFLRLVTTLCKAGDLDGALEVHKKSGQFKHVLVDPRQYG 428
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-------YNSLVSALALNGEVEETVKN 347
L+ LCA G+ A E+ DE+ KG + S KS YN ++ L NG ++ +
Sbjct: 429 VLMQSLCAGGKCDGAVEVLDELLEKGTLLSPKSPVLEAPAYNPVIEYLCNNGNTKKA-ET 487
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ + K+ D + + +++ + G A ++L + + + D ++T L+D
Sbjct: 488 FFRQLMKKGVDDKLAFNSLIRGHAKEGVLEAAQEILAIMTRRGVPTDPISHTLLVD 543
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGL 300
F+Q++ G++ D + NS+I+G+ + A I M +P + S+ L+
Sbjct: 489 FRQLMKKGVD-DKLAFNSLIRGHAKEGVLEAAQEILAIM--TRRGVPTDPISHTLLVDSF 545
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ +A+ D M +G +PS + S++ AL +G V+ + + MIEK +
Sbjct: 546 LKKNEPADAKTALDSMMEQGHLPSPALFKSVMVALFDDGRVQTASRVMRSMIEKGVTENM 605
Query: 361 ITYRTVLDEICRRGRAGEAM 380
+L+ + RG EA+
Sbjct: 606 DMAHKILEALFMRGHVDEAI 625
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 114/287 (39%), Gaps = 28/287 (9%)
Query: 129 KQPRFRH---DASTYHIMTRKLGAAKMYQEMDDVVNQMLA-----TPSFCGTEA-LYNTI 179
K +F+H D Y ++ + L A +V++++L +P EA YN +
Sbjct: 413 KSGQFKHVLVDPRQYGVLMQSLCAGGKCDGAVEVLDELLEKGTLLSPKSPVLEAPAYNPV 472
Query: 180 IYFFAEARKLSRAVYVFK-YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
I + +A F+ MK + + ++N L G +E
Sbjct: 473 IEYLCNNGNTKKAETFFRQLMKKGVDDKL-----AFNSLIRGHAKEG--------VLEAA 519
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+ + M G+ D S ++ ++ N DA M + +LP+ + ++
Sbjct: 520 QEILAIMTRRGVPTDPISHTLLVDSFLKKNEPADAKTALDSM-MEQGHLPSPALFKSVMV 578
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
L GR + A + M KG + + ++ AL + G V+E + + M+E
Sbjct: 579 ALFDDGRVQTASRVMRSMIEKGVTENMDMAHKILEALFMRGHVDEAIGRVNLMVENGCMP 638
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +L +C++ + EA KL +++ + TY K+L+ L
Sbjct: 639 DL---DKLLVALCQKDKVMEAHKLADFALDRDFEVSFSTYDKVLEAL 682
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 138/274 (50%), Gaps = 22/274 (8%)
Query: 136 DASTYHIMT----RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D TY I+ R G + + +D++ ++ TP YN ++ + +L
Sbjct: 238 DVITYTILIEATCRDSGVGQAMKLLDEMRDRG-CTPDV----VTYNVLVNGICKEGRLDE 292
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ K++ + + C+P++ ++NI+ + S G+ +M+ + L M+ G
Sbjct: 293 AI---KFLNDMPSSGCQPNVITHNIILRSMCSTGR-------WMDAEK-LLADMLRKGFS 341
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + + N +I + A+ I +M + PNS SY+ L+HG C + + A E
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKM-PKHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ M +G P +YN++++AL +G+VE+ V+ L ++ K ITY TV+D +
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ G+ G+A+KLL E++ K+L D TY+ L+ L
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 48/289 (16%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T++I+ R + + + + + ++ ML F + +N +I F L RA+ + +
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M C+P+ SYN L F K M+ ++MV+ G PDI + N
Sbjct: 370 MPKH---GCQPNSLSYNPLLHGFCKEKK--------MDRAIEYLERMVSRGCYPDIVTYN 418
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+M+ V DA+ I +Q+ P +Y+ +I GL G+T A +L DEM+
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSS-KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVK----------------------NLWEMIEKQR 356
K P + +Y+SLV L+ G+V+E +K L + + R
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDR 537
Query: 357 PVDFI-------------TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+DF+ +Y +++ + G A EA++LL EL NK L+
Sbjct: 538 AIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
FK+++N P I L F GK + + + G PD+
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKI--------LEVLEGSGAVPDVI 173
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N MI GY + +N+AL + +M V P+ +Y+ ++ LC G+ K A E+ D
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M ++ P +Y L+ A + V + +K L EM ++ D +TY +++ IC+ GR
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 376 AGEAMKLLKEL 386
EA+K L ++
Sbjct: 290 LDEAIKFLNDM 300
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T+I F K +A + + ++ S + P + +YN++ + + G+ IN+
Sbjct: 142 TLIRGFCRMGKTRKAAKILEVLEGSGAV---PDVITYNVMISGYCKAGE---INNAL--- 192
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ +M + PD+ + N++++ S + A+ + +M + + P+ +Y LI
Sbjct: 193 --SVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM-LQRDCYPDVITYTILI 246
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
C A +L DEM+ +G P +YN LV+ + G ++E +K L +M
Sbjct: 247 EATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ IT+ +L +C GR +A KLL ++ K
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 110/241 (45%), Gaps = 19/241 (7%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
++G + ++ +V+ A P YN +I + +A +++ A+ V M S
Sbjct: 149 RMGKTRKAAKILEVLEGSGAVPDV----ITYNVMISGYCKAGEINNALSVLDRMSVS--- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P + +YN + + GK V +M+ PD+ + +I+
Sbjct: 202 ---PDVVTYNTILRSLCDSGKLKQAMEV--------LDRMLQRDCYPDVITYTILIEATC 250
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V A+++ +M P+ +Y+ L++G+C +GR A + ++M G P+
Sbjct: 251 RDSGVGQAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
++N ++ ++ G + K L +M+ K +T+ +++ +CR+G G A+ +L++
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 386 L 386
+
Sbjct: 370 M 370
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+ ++ + + + + + M V + +P+ LI G C G+T+ A ++ + ++
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENM-VYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLE 164
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
G VP +YN ++S GE+ + L M D +TY T+L +C G+
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLK 221
Query: 378 EAMKLL-KELQNKNLIDGYTYTKLLDVLEDDFG 409
+AM++L + LQ D TYT L++ D G
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 117/227 (51%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + ++ A V M R+ + P +YNI+ + SRGK +
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRM---RSKDFSPDTVTYNIMIGSLCSRGK--------L 205
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + Q+++D +P + + +I+ +L V++AL++ +M + P+ F+Y+
Sbjct: 206 DLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEM-LSRGLKPDMFTYNT 264
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C +G A E+ ++ KG P SYN L+ AL G+ EE K + +M ++
Sbjct: 265 IIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 324
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ +TY ++ +CR G+ EAM LLK ++ K L D Y+Y L+
Sbjct: 325 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 371
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 36/268 (13%)
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
G + + +D+++++ L F YNTII + + RA F+ ++N C
Sbjct: 239 GVDEALKLLDEMLSRGLKPDMFT-----YNTIIRGMCKEGMVDRA---FEMIRNLELKGC 290
Query: 208 RPSIRSYNILFTAFLSRGK-----------------NTYINHVYMETIRC---------- 240
P + SYNIL A L++GK + + + T C
Sbjct: 291 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 350
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L K M G+ PD +S + +I + ++ A+ M + LP+ +Y+ ++ L
Sbjct: 351 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM-ISDGCLPDIVNYNTVLATL 409
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G+ A E+ ++ G P+S SYN++ SAL +G+ + + EM+ D
Sbjct: 410 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDE 469
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQN 388
ITY +++ +CR G +A +LL ++++
Sbjct: 470 ITYNSMISCLCREGMVDKAFELLVDMRS 497
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 48/275 (17%)
Query: 148 GAAKMYQEMDDVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
G KM +DD + + + F YN +I KL A+ V + +
Sbjct: 163 GFCKM-NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDN-- 219
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
C+P++ +Y IL A + G ++ L +M++ G++PD+F+ N++I+G
Sbjct: 220 -CQPTVITYTILIEATMLEGG--------VDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270
Query: 266 LSNHVNDALRIFHQMG--------VVYNYL--------------------------PNSF 291
V+ A + + + YN L PN
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y LI LC G+ + A L MK KG P + SY+ L++A G ++ ++ L M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
I D + Y TVL +C+ G+A +A+++ +L
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 425
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 91/170 (53%), Gaps = 6/170 (3%)
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY-LPNSFS 292
Y+E++ L + MV G PD+ +IKG+ +V A+R+ M ++ + P+ F+
Sbjct: 101 YIESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRV---MEILEKFGQPDVFA 156
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI+G C R +A + D M+ K F P + +YN ++ +L G+++ +K L +++
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
ITY +++ G EA+KLL E+ ++ L D +TY ++
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTII 266
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 123/300 (41%), Gaps = 48/300 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D +Y+I+ R L ++E + ++ +M + C + Y+ +I K+ A+
Sbjct: 293 DVISYNILLRALLNQGKWEEGEKLMTKMFSEK--CDPNVVTYSILITTLCRDGKIEEAMN 350
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ K MK P SY+ L AF G+ ++ + M++DG PDI
Sbjct: 351 LLKLMKEKG---LTPDAYSYDPLIAAFCREGR--------LDVAIEFLETMISDGCLPDI 399
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVV--------YNYL------------------- 287
+ N+++ + + AL IF ++G V YN +
Sbjct: 400 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459
Query: 288 -------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
P+ +Y+ +I LC +G A EL +M+ F PS +YN ++
Sbjct: 460 MVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 519
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKL 400
+E+ + L M+ + TY +++ I G EAM+L +L N I Y++ +L
Sbjct: 520 IEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISEYSFKRL 579
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 130/283 (45%), Gaps = 14/283 (4%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
ELFN K+ D Y+++ KM E V+ + L + T A YN++I
Sbjct: 321 ELFNRMVKR-GLEPDVLNYNVLIDGYCKTKMVDEAM-VLFKELCNKNLVPTIASYNSLID 378
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ ++S + M S P + +YNIL A G+ +E + L
Sbjct: 379 GLCNSGRISHVKKLLDEMHGSAQ---PPDVVTYNILIDALCKEGR-------ILEALGVL 428
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
M+ G++P+I + N+M+ GY L N+VN A IF++M V P+ +Y+ LI+G C
Sbjct: 429 V-MMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM-VKSGLEPDILNYNVLINGYC 486
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
A L EM+ K +P SYNSL+ L G + + L EM + + D I
Sbjct: 487 KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVI 546
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
TY +LD C+ +A+ L +++ D YT ++D L
Sbjct: 547 TYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNL 589
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P ++NIL A G+ + + + M G +PDI + N++++GY
Sbjct: 263 PDDYTFNILIDALCKEGR--------ILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRE 314
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+V++A +F++M V P+ +Y+ LI G C A L E+ K VP+ SY
Sbjct: 315 NVHEARELFNRM-VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
NSL+ L +G + K L EM +P D +TY ++D +C+ GR EA+ +L +
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 389 KN----------LIDGYTYTKLLDVLEDDFGNSIRHHLR 417
K ++DGY ++V +D F ++ L
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PSI ++ IL N Y + + L ++ G +P++ + N++I G+ ++
Sbjct: 88 PSIATFTILI--------NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCING 139
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ AL F Q + YL + F+Y LI+GL G+ K A L EM++ P+ Y
Sbjct: 140 MIFKALD-FCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMY 198
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
++L+ L +G V + + ++ E+ +D +TY +++D C GR E +LL ++
Sbjct: 199 SALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258
Query: 389 KNL-IDGYTYTKLLDVL 404
+N+ D YT+ L+D L
Sbjct: 259 ENVDPDDYTFNILIDAL 275
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + + + A+ +FK M++ +NL P I SYN L + G+ I HV
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRH-KNL--IPDIASYNSLIDGLCNLGR---IPHV-- 529
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L +M + G PD+ + N ++ + + + A+ +F Q +V P+ ++
Sbjct: 530 ---QELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ--IVEGIWPDFYTNHA 584
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ LC + K A + + G P+ ++Y L++AL +G E + L +M +
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDND 644
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
RP D IT+ ++ + +R +A KL +E+ + L++
Sbjct: 645 RPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVN 682
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I ++ ++ A+++ + M+ S +P++ Y+ L G ++
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKS---SVQPNLVMYSALIDGLCKDG--------FV 211
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L Q+ GI D + NS+I G + ++ +M V N P+ ++++
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM-VRENVDPDDYTFNI 270
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI LC +GR A+ + M ++G P +YN+L+ V E + M+++
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
D + Y ++D C+ EAM L KEL NKNL+ +Y L+D L
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 130/262 (49%), Gaps = 20/262 (7%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
AA+ + ++++ + LA +F YN +I + + K +A+ +F+ M R
Sbjct: 270 AAEAHALVEEMGEKGLAPDAFT-----YNILINGYCKEGKEKKAMKMFEVMVGK---GIR 321
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
++ +Y L A +G + ET R LF V GI PD+F N++I +
Sbjct: 322 ATVVTYTSLIHALSMKG-------MVQETDR-LFNDAVRRGIRPDLFMYNALINSHCTGG 373
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ A I +M P+ +Y+ L+ GLC GR AR L +EM ++G P SY
Sbjct: 374 DMDRAFEIMGEM-EKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSY 432
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+S ++ G++++ VK EM+ K +TY ++ +C G+ G+A L+KE+
Sbjct: 433 NTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVG 492
Query: 389 KNLI-DGYTYTKLLDVL--EDD 407
+ D TY L++ L ED+
Sbjct: 493 NGITPDDSTYISLIEGLTTEDE 514
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 24/252 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A K RA+ + + M + P+ +YN + F +RG+ +
Sbjct: 119 FNIMLRHLCTAGKPVRALELLRQMPS-------PNAVTYNTVIAGFCARGRV----QAGI 167
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +R + ++ GI PD ++ ++I G+ V DA ++F +M PN+ Y+
Sbjct: 168 EIMREMRER---GGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNA 224
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C QG + A EM +G + +YN V L + G E + EM EK
Sbjct: 225 LIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKG 284
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL-------EDD 407
D TY +++ C+ G+ +AMK+ + + K + TYT L+ L E D
Sbjct: 285 LAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETD 344
Query: 408 --FGNSIRHHLR 417
F +++R +R
Sbjct: 345 RLFNDAVRRGIR 356
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 23/213 (10%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMD----DVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
R TY + L M QE D D V + + F +YN +I
Sbjct: 320 IRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLF-----MYNALINSHCTGGD 374
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ RA + M+ R P +YN L G+ ++ R L ++M
Sbjct: 375 MDRAFEIMGEMEKKR---ITPDDVTYNTLMRGLCLLGR--------LDEARGLIEEMTKR 423
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-GVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI+PD+ S N++I GY + + DA+++ +M G +N P +Y+ +I GLC G+
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFN--PTLLTYNAMIKGLCLNGQGG 481
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
+A +L EM G P +Y SL+ L E
Sbjct: 482 DAEDLVKEMVGNGITPDDSTYISLIEGLTTEDE 514
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 10/198 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PS+ S N+L + LS G++ +R F +V G PD F+ N ++ + +
Sbjct: 121 PSLSSCNLLLESLLSVGRHA--------DVRAAFGLLVAAGARPDTFAWNKAVQACVAAG 172
Query: 269 HVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+++AL + +MG P ++FSY+ +I GL G+ +A ++ DEM +G P+ +
Sbjct: 173 DLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQIT 232
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN+++ G++E + +M++ R + +TY +L +CR GR E L+ E+
Sbjct: 233 YNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMT 292
Query: 388 NKNLI-DGYTYTKLLDVL 404
+ +++ DG+TY+ L D L
Sbjct: 293 SYSMLPDGFTYSILFDGL 310
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 161/377 (42%), Gaps = 52/377 (13%)
Query: 73 GVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPR 132
G+ + + D AL D + S LP F L + +T D L LF + K+
Sbjct: 274 GLCRAGRMDETRALMDEM--TSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGV 331
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
A T I+ L + + V+ +ML T A+YNT+I + + R L A
Sbjct: 332 II-GAYTCSILLNGLCKDGKVAKAEQVL-EMLVHTGLVPTTAIYNTLINGYCQVRDLQGA 389
Query: 193 VYVFKYMKNSRNLE-------------CR--------------------PSIRSYNILFT 219
+F+ MK SR++ C+ PS+ ++N L
Sbjct: 390 FSIFEQMK-SRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLID 448
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
A+ G+ +E + M + GI+ ++ S S++K + + + +A+ I
Sbjct: 449 AYGRAGQ--------LEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDD 500
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
M + + +PN+ Y+ +I G T+ A L ++MK G S +YN L+ L N
Sbjct: 501 M-IHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNS 559
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYT 398
+++E + ++ + + D ++Y T++ C +G A++LL+E+ ++ TY
Sbjct: 560 QIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYH 619
Query: 399 KLLDVLEDDFGNSIRHH 415
LL L G++ R H
Sbjct: 620 PLLSAL----GSAGRVH 632
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 10/217 (4%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N + A L A+ + + M S P SYN++ GK + V
Sbjct: 161 WNKAVQACVAAGDLDEALAMLRRMGRSEGAP-PPDAFSYNVVIAGLWRSGKGSDALKV-- 217
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F +MV+ G+ P+ + N+MI G++ + R+ QM + PN +Y+
Sbjct: 218 ------FDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQM-LQDGRKPNVVTYNV 270
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC GR R L DEM +P +Y+ L L G+ + E ++K
Sbjct: 271 LLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKG 330
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ T +L+ +C+ G+ +A ++L+ L + L+
Sbjct: 331 VIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 367
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 19/266 (7%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
K R D TY+ + L +M E +D+V +M + E +NT+I + A +
Sbjct: 397 KSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVET-FNTLIDAYGRAGQ 455
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L + V M++ + ++ S+ + AF GK + + M++
Sbjct: 456 LEKCFTVLSDMQDK---GIKSNVISFGSVVKAFCKNGK--------IPEAVAILDDMIHK 504
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGR 305
+ P+ NS+I YI S A + +M GV + F+Y+ L+ GLC +
Sbjct: 505 DVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASI----FTYNLLLKGLCKNSQ 560
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A EL + +G P SYN+++SA G+ + ++ L EM + TY
Sbjct: 561 IDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHP 620
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL 391
+L + GR + L + + +KN+
Sbjct: 621 LLSALGSAGRVHDMECLYQHMVHKNV 646
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD FS N +I G S +DAL++F +M V PN +Y+ +I G G +
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEM-VDRGVAPNQITYNTMIDGHVKGGDLEAGFR 251
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L D+M + G P+ +YN L+S L G ++ET + EM D TY + D +
Sbjct: 252 LRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLT 311
Query: 372 RRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVLEDD 407
R G + + L E K +I G YT + LL+ L D
Sbjct: 312 RTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKD 348
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 122/277 (44%), Gaps = 30/277 (10%)
Query: 136 DASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
DA +Y+++ L A K++ EM V++ +A + YNT+I +
Sbjct: 194 DAFSYNVVIAGLWRSGKGSDALKVFDEM---VDRGVAP-----NQITYNTMIDGHVKGGD 245
Query: 189 LSRAVYVFKYM-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
L + M ++ R +P++ +YN+L + G+ M+ R L +M +
Sbjct: 246 LEAGFRLRDQMLQDGR----KPNVVTYNVLLSGLCRAGR--------MDETRALMDEMTS 293
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+ PD F+ + + G + L +F + + + +++ L++GLC G+
Sbjct: 294 YSMLPDGFTYSILFDGLTRTGDSRTMLSLFGE-SLKKGVIIGAYTCSILLNGLCKDGKVA 352
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A ++ + + G VP++ YN+L++ +++ +M + D ITY ++
Sbjct: 353 KAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALI 412
Query: 368 DEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDV 403
+ +C+ EA L+ E++ + T+ L+D
Sbjct: 413 NGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDA 449
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN+II + E+ +A + + MK+S SI +YN+L KN+ I+
Sbjct: 512 VYNSIIDAYIESGGTEQAFLLVEKMKSS---GVSASIFTYNLLLKGLC---KNSQIDEA- 564
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
L + N G+ PD+ S N++I + AL + +M Y+ P +Y
Sbjct: 565 ----EELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHK-YDIRPTLRTYH 619
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
L+ L + GR + L M K PSS Y +
Sbjct: 620 PLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT 655
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 117/227 (51%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + ++ A V M R+ + P +YNI+ + SRGK +
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRM---RSKDFSPDTVTYNIMIGSLCSRGK--------L 209
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + Q+++D +P + + +I+ +L V++AL++ +M + P+ F+Y+
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYNT 268
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C +G A E+ ++ KG P SYN L+ AL G+ EE K + +M ++
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ +TY ++ +CR G+ EAM LLK ++ K L D Y+Y L+
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 36/268 (13%)
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
G + + MD+++++ L F YNTII + + RA F+ ++N C
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFT-----YNTIIRGMCKEGMVDRA---FEMVRNLELKGC 294
Query: 208 RPSIRSYNILFTAFLSRGK-----------------NTYINHVYMETIRC---------- 240
P + SYNIL A L++GK + + + T C
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L K M G+ PD +S + +I + ++ A+ M + LP+ +Y+ ++ L
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM-ISDGCLPDIVNYNTVLATL 413
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G+ A E+ ++ G P+S SYN++ SAL +G+ + + EM+ D
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQN 388
ITY +++ +CR G EA +LL ++++
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRS 501
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 48/275 (17%)
Query: 148 GAAKMYQEMDDVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
G KM +DD + + + F YN +I KL A+ V + +
Sbjct: 167 GFCKM-NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN-- 223
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
C+P++ +Y IL A + G ++ L +M++ G++PD+F+ N++I+G
Sbjct: 224 -CQPTVITYTILIEATMLEGG--------VDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 266 LSNHVNDALRIFHQMG--------VVYNYL--------------------------PNSF 291
V+ A + + + YN L PN
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y LI LC G+ + A L MK KG P + SY+ L++A G ++ ++ L M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
I D + Y TVL +C+ G+A +A+++ +L
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 16/269 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D +Y+I+ R L ++E + ++ +M + C + Y+ +I K+ A+
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEK--CDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ K MK P SY+ L AF G+ ++ + M++DG PDI
Sbjct: 355 LLKLMKEKG---LTPDAYSYDPLIAAFCREGR--------LDVAIEFLETMISDGCLPDI 403
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N+++ + + AL IF ++G V PNS SY+ + L + G A +
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM G P +YNS++S L G V+E + L +M + +TY VL C+
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 375 RAGEAMKLLKEL-QNKNLIDGYTYTKLLD 402
R +A+ +L+ + N + TYT L++
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIE 551
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 6/170 (3%)
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY-LPNSFS 292
Y+E++ L + MV G PD+ +IKG+ ++ A+R+ M ++ + P+ F+
Sbjct: 105 YIESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV---MEILEKFGQPDVFA 160
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI+G C R +A + D M+ K F P + +YN ++ +L G+++ +K L +++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
ITY +++ G EA+KL+ E+ ++ L D +TY ++
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 136/329 (41%), Gaps = 46/329 (13%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P LC++ L DPL L F W + F H +T+H + L +
Sbjct: 43 SLKTLIPSLTPSLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTL 102
Query: 154 QEMDDVVNQML---ATP--------------------------SFCGTEALYNTIIYFFA 184
+ ++V N M+ +P +F + YN ++ +
Sbjct: 103 RAAENVRNSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLS 162
Query: 185 EARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQ 244
+ + ++K M P++ + N + ++ G ++ +RC
Sbjct: 163 RFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRC---- 218
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP--NSFSYDYLIHGLCA 302
G PD+F+ S++ GY ++ V A +F M P N+ SY LIHGLC
Sbjct: 219 --EPG--PDLFTYTSLVLGYCRNDDVERACGVFCVM-------PRRNAVSYTNLIHGLCE 267
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
G+ A E M+ G P+ ++Y LV AL +G E + EM E+ + T
Sbjct: 268 AGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYT 327
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNL 391
Y ++D +C+ GR EA+K+L E+ K +
Sbjct: 328 YTVLIDYLCKEGRMDEALKMLNEMVEKGV 356
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 125/298 (41%), Gaps = 56/298 (18%)
Query: 156 MDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
M+D V ++ + C YN +I F + + RA+ + M S+ P + +
Sbjct: 376 MEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESK---LSPDVVT 432
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNS-------------- 259
YN L G +++ LF+ M+ DG PD ++ N+
Sbjct: 433 YNTLIHGLCEVG--------VVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEA 484
Query: 260 ---------------------MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+I GY + + A +F +M + LPNS +++ +I
Sbjct: 485 HQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRM-LAEECLPNSITFNVMID 543
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GL +G+ ++A L ++M + P+ +YN LV + + + + L +I
Sbjct: 544 GLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQP 603
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLD------VLEDDFG 409
+ +TY + C +GR EA +++ +++N+ L+D + Y L++ +L+ FG
Sbjct: 604 NVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFG 661
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 138/338 (40%), Gaps = 44/338 (13%)
Query: 87 DDTQFRCAVSELPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRFRHDAS-----TY 140
DD + C V + PR N N++ L E + L WA R R D TY
Sbjct: 238 DDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWA----RMREDGCFPTVRTY 293
Query: 141 HIMT-------RKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLS 190
++ R+L A ++ EM + G E Y +I + + ++
Sbjct: 294 TVLVCALCESGRELEALSLFGEMRER-----------GCEPNVYTYTVLIDYLCKEGRMD 342
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A+ + M PS+ +N L ++ RG ME + M + +
Sbjct: 343 EALKMLNEMVEK---GVAPSVVPFNALIGSYCKRG--------MMEDAVGVLGLMESKKV 391
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P++ + N +I G+ ++ A+ + ++M V P+ +Y+ LIHGLC G +A
Sbjct: 392 CPNVRTYNELICGFCRGKSMDRAMALLNKM-VESKLSPDVVTYNTLIHGLCEVGVVDSAS 450
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
L M R GF P ++N+ + L G V E + L + EK + Y ++D
Sbjct: 451 RLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510
Query: 371 CRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLDVLEDD 407
C+ G+ A L K L + L + T+ ++D L +
Sbjct: 511 CKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKE 548
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y +I + +A K+ A +FK M EC P+ ++N++ GK
Sbjct: 500 EHAYTALIDGYCKAGKIEHAASLFKRMLAE---ECLPNSITFNVMIDGLRKEGK------ 550
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
++ L + M ++P + + N +++ + + A I +++ + Y PN +
Sbjct: 551 --VQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRL-ISSGYQPNVVT 607
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y I C+QGR + A E+ ++K +G + S YN L++A G ++ L M
Sbjct: 608 YTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMF 667
Query: 353 EKQRPVDFITYRTVLDEI 370
++TY ++ +
Sbjct: 668 GTGCEPSYLTYSILMKHL 685
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 116/303 (38%), Gaps = 52/303 (17%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+I+ ++ + ++++N+++++ + Y I + +L A +
Sbjct: 572 TYNILVEEVLKEYDFDRANEILNRLISS-GYQPNVVTYTAFIKAYCSQGRLEEAEEMVIK 630
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+KN L YN+L A+ G +++ + ++M G EP + +
Sbjct: 631 IKNEGVL---LDSFIYNLLINAYGCMG--------LLDSAFGVLRRMFGTGCEPSYLTYS 679
Query: 259 SMIKGYILSNHVNDA-----------------------------LRIFHQMGVVYNYLPN 289
++K ++ H + +F +M +PN
Sbjct: 680 ILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAEC-GCVPN 738
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+Y LI+GLC GR A L M+ G PS +NSL+S+ G E V L
Sbjct: 739 LNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLD 798
Query: 350 EMIEKQRPVDFITYRTVL----DEICRRGRAGEAMKLLK------ELQNKNLIDGYTYTK 399
M+E +Y+ ++ +++ + LL+ E+ K LIDG T
Sbjct: 799 SMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTG 858
Query: 400 LLD 402
+D
Sbjct: 859 YVD 861
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 14/272 (5%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ D Y+ + + ++ E + ++M A YNT+IY F KL A+
Sbjct: 196 KPDVVMYNTIIDAMCKYQLVSEAYGLFSEM-AVKGISADVVTYNTLIYGFCIVGKLKEAI 254
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ M P++ +YNIL A GK ++ + + M+ ++PD
Sbjct: 255 GLLNEMVLK---TINPNVYTYNILVDALCKEGK--------VKEAKSVLAVMLKACVKPD 303
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + ++++ GY L V A +F+ M ++ P+ +Y LI+G C A L
Sbjct: 304 VITYSTLMDGYFLVYEVKKAQHVFNAMSLM-GVTPDVHTYTILINGFCKNKMVDEALNLF 362
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
EM +K VP +Y+SL+ L +G + + EM ++ +P D ITY +++D +C+
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422
Query: 374 GRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
G A+ L +++++ + + +T+T LLD L
Sbjct: 423 GHLDRAIALFNKMKDQEIRPNIFTFTILLDGL 454
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 117/261 (44%), Gaps = 29/261 (11%)
Query: 154 QEMDDVVNQ------MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
Q +DD V+Q M TP +N I+ FA+ + S AV + S LE
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQ----FNKILDSFAKMKHYSTAVSL------SHRLEL 87
Query: 208 R---PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+ P + + NIL F G+ T+ V +++ G PD +LN++IKG
Sbjct: 88 KGIQPDLITLNILINCFCHMGQITFGFSV--------LAKILKRGYPPDTVTLNTLIKGL 139
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
L V AL FH + + N SY LI+G+C G T+ A + ++ + P
Sbjct: 140 CLKGQVKKALH-FHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPD 198
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
YN+++ A+ V E EM K D +TY T++ C G+ EA+ LL
Sbjct: 199 VVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLN 258
Query: 385 ELQNKNL-IDGYTYTKLLDVL 404
E+ K + + YTY L+D L
Sbjct: 259 EMVLKTINPNVYTYNILVDAL 279
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 111/217 (51%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I F + + + A+ +FK M + +N+ P I +Y+ L G+ +Y+
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEM-HQKNM--VPGIVTYSSLIDGLCKSGRISYVWD--- 395
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M + G D+ + +S+I G + H++ A+ +F++M PN F++
Sbjct: 396 -----LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD-QEIRPNIFTFTI 449
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC GR K+A+E+ ++ KG+ + +YN +++ G +EE + L +M +
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ T+ T++ + ++ +A KLL+++ + L+
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
>gi|296081510|emb|CBI20033.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 148/331 (44%), Gaps = 60/331 (18%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG--------- 171
L +F WA+ FRHD STY M + L + ++ ++ M++ P C
Sbjct: 115 LHIFTWAATIDSFRHDHSTYEWMVKTLAITDRFDDLHSLLQGMVSNPCPCSDGIFSCPRM 174
Query: 172 -----TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
+ A++N +I + + R+ + + V++ M R +P + ++N L + S +
Sbjct: 175 IDGKPSVAMHNILINGYVKCREHEKVMTVYEKMIKDR---VKPDVFTFNSLIS---SCCR 228
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY---------------------- 264
N+ + +E +FK+M + G P++ S N++IKG
Sbjct: 229 NSQFG-LALE----MFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGVGMAYEMLELGCE 283
Query: 265 -------ILSNHVNDALRIFHQMGVVYNY-----LPNSFSYDYLIHGLCAQGRTKNAREL 312
IL + + R+ ++ ++ LPN F Y LI LC + A EL
Sbjct: 284 FSNVTCEILVDGLCREGRVLEAFDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALEL 343
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D++ RKG PSS + +L+ L G+ EE + + +M+ + D +T +L ++C
Sbjct: 344 LDQLWRKGNAPSSIACTTLIEGLRRFGKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCE 403
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
GR+ EA KL +K L DG T+ L++
Sbjct: 404 VGRSFEANKLRLLASSKGLDSDGMTFNILVN 434
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 117/227 (51%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + ++ A V M R+ + P +YNI+ + SRGK +
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRM---RSKDFSPDTVTYNIMIGSLCSRGK--------L 209
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + Q+++D +P + + +I+ +L V++AL++ +M + P+ F+Y+
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYNT 268
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C +G A E+ ++ KG P SYN L+ AL G+ EE K + +M ++
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ +TY ++ +CR G+ EAM LLK ++ K L D Y+Y L+
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 48/275 (17%)
Query: 148 GAAKMYQEMDDVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
G KM +DD + + + F YN +I KL A+ V + +
Sbjct: 167 GFCKM-NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN-- 223
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
C+P++ +Y IL A + G ++ L +M++ G++PD+F+ N++I+G
Sbjct: 224 -CQPTVITYTILIEATMLEGG--------VDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 266 LSNHVNDALRIFHQMG--------VVYNYL--------------------------PNSF 291
V+ A + + + YN L PN
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y LI LC G+ + A L MK KG P + SY+ L++A G ++ ++ L M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
I D + Y TVL +C+ G+A +A+++ +L
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 122/271 (45%), Gaps = 42/271 (15%)
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
G + + MD+++++ L F YNTII R + + V + + RNLE
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFT-----YNTII------RGMCKEGMVDRAFEMVRNLEL 291
Query: 208 R---PSIRSYNILFTAFLSRGK-----------------NTYINHVYMETIRC------- 240
+ P + SYNIL A L++GK + + + T C
Sbjct: 292 KGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEE 351
Query: 241 ---LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
L K M G+ PD +S + +I + ++ A+ M + LP+ +Y+ ++
Sbjct: 352 AMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM-ISDGCLPDIVNYNTVL 410
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
LC G+ A E+ ++ G P+S SYN++ SAL +G+ + + EM+
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
D ITY +++ +CR G EA +LL ++++
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 16/269 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D +Y+I+ R L ++E + ++ +M + C + Y+ +I K+ A+
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEK--CDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ K MK P SY+ L AF G+ ++ + M++DG PDI
Sbjct: 355 LLKLMKEK---GLTPDAYSYDPLIAAFCREGR--------LDVAIEFLETMISDGCLPDI 403
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N+++ + + AL IF ++G V PNS SY+ + L + G A +
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM G P +YNS++S L G V+E + L +M + +TY VL C+
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 375 RAGEAMKLLKEL-QNKNLIDGYTYTKLLD 402
R +A+ +L+ + N + TYT L++
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIE 551
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 6/170 (3%)
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY-LPNSFS 292
Y+E++ L + MV G PD+ +IKG+ ++ A+R+ M ++ + P+ F+
Sbjct: 105 YIESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV---MEILEKFGQPDVFA 160
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI+G C R +A + D M+ K F P + +YN ++ +L G+++ +K L +++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
ITY +++ G EA+KL+ E+ ++ L D +TY ++
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 40/313 (12%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE---ALYN 177
+ELF+ + ++ + +Y I+ + L E+ ++ M G E +YN
Sbjct: 181 IELFDVMVARG-YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHM----KVVGCEPDVVIYN 235
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF--LSRGKNTY--INHV 233
TI+ + R ++ AV++F MK + L P++ +Y L L R K + +N +
Sbjct: 236 TIVDRLCKDRLVNEAVHIFCKMKGTGIL---PTVVTYTSLIHGLRNLGRWKEAFGLLNEM 292
Query: 234 YMETI-----------------------RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
I R + K M G+EPD+ + N+++ GY L V
Sbjct: 293 KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEV 352
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+A ++F M + +P+ FS+ L++G C R A++L DEM +G +P + SYN+
Sbjct: 353 VEARKVFEVM-ISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNT 411
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+S L E + +M P + +TY +LD + ++G +AM L + ++N
Sbjct: 412 LISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSG 471
Query: 391 L-IDGYTYTKLLD 402
L D TY ++D
Sbjct: 472 LKPDLVTYNIMID 484
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 113/239 (47%), Gaps = 26/239 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
++ +I + ++S A + K M + P + +YN L + R M
Sbjct: 304 FSVLIDIMCKEGEVSEARVILKTMTE---MGVEPDVATYNTLMNGYCLR----------M 350
Query: 236 ETI--RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
E + R +F+ M++ G PD+FS + ++ GY + +++A ++F +M +P++ SY
Sbjct: 351 EVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEM-THRGLIPDTVSY 409
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LI GLC R A EL +M G+ P+ +Y+ L+ L+ G +++ + M
Sbjct: 410 NTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMEN 469
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLD 402
D +TY ++D +C+ G+ +A +L EL K L IDG LLD
Sbjct: 470 SGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLD 528
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 13/221 (5%)
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
R ++ A+ F +M N+ L PSI + LF+A L R K + +T+ L KQM
Sbjct: 70 RNINDALSAFNHMVNTNPL---PSIVKFGELFSA-LVRMK-------HYKTVVSLSKQME 118
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
GI D+ SL +I + HV+ + ++ + PN ++ LI+G C +G+
Sbjct: 119 MAGISHDVLSLTILINCFCRLCHVDYGFSVLGKI-IKLGLEPNVITFSTLINGFCIEGKI 177
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
A EL D M +G+ P+ SY+ ++ L G+ E +K L M D + Y T+
Sbjct: 178 GRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTI 237
Query: 367 LDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVLED 406
+D +C+ EA+ + +++ ++ TYT L+ L +
Sbjct: 238 VDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRN 278
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 48/226 (21%)
Query: 163 MLATPSFCGTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
+L T + G E A YNT++ + ++ A VF+ M + + P + S++IL
Sbjct: 323 ILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRM---PDVFSFSILV- 378
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
N Y ++ + LF +M + G+ PD S N++I G + +A +F
Sbjct: 379 -------NGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431
Query: 280 MG--------VVYNYL--------------------------PNSFSYDYLIHGLCAQGR 305
M V Y+ L P+ +Y+ +I G+C G+
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
K+AREL E+ KG P++ + + G ++E K +M
Sbjct: 492 FKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQM 537
>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g53330
gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 471
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 147/303 (48%), Gaps = 20/303 (6%)
Query: 107 LCNVMTLQEDPLVCLELF---NWASKQPR--FRHDASTYHIMTRKLGAAKMYQEMDDVVN 161
L +++ + DP ++LF + S P+ FR+ Y I+ KLG +KM+ E+D V+
Sbjct: 12 LASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLL 71
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+ TE ++ +I FF + SRA+++F M R C+ +++S N L +A
Sbjct: 72 HLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYR---CQRTVKSLNSLLSAL 128
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
L G+ +E ++ + G +PD + N +I G S +DAL++F +M
Sbjct: 129 LKCGE--------LEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEM- 178
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELC-DEMKRKGFVPSSKSYNSLVSALALNGE 340
V P ++ LIHGLC R K A ++ D +K G P+ Y SL+ AL GE
Sbjct: 179 VKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGE 238
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
+ K E E + VD Y T++ + + GR+ E +L+E+ K D TY
Sbjct: 239 LSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNV 298
Query: 400 LLD 402
L++
Sbjct: 299 LIN 301
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 16/262 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ DA TY+I+ + + + + ++M+ T + T+I+ + ++ A+
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKK-KVKPTGVTFGTLIHGLCKDSRVKEAL 207
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ M + RP++ Y L A G+ ++ + E K ++
Sbjct: 208 KMKHDMLKVYGV--RPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIK------VDAA 259
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
I+S ++I I + N+ I +M P++ +Y+ LI+G C + +++A +
Sbjct: 260 IYS--TLISSLIKAGRSNEVSMILEEMSE-KGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM KG P SYN ++ + EE +M + D ++YR V D +C
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 374 GRAGEAMKLLKELQNKNLIDGY 395
+ EA +L E+ L GY
Sbjct: 377 LQFEEAAVILDEM----LFKGY 394
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A+Y+T+I +A + + + + M C+P +YN+L F + N V
Sbjct: 259 AIYSTLISSLIKAGRSNEVSMILEEMSEKG---CKPDTVTYNVLINGFCVENDSESANRV 315
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+MV G++PD+ S N ++ + +A +F M P++ SY
Sbjct: 316 --------LDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPR-RGCSPDTLSY 366
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+ GLC + + A + DEM KG+ P + L +G++E
Sbjct: 367 RIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLE 415
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 48/286 (16%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA-VYVFKYMKNSRNLEC 207
A ++ +EM + Q +A +FC YN++I ++A+K+ A ++ + ++N
Sbjct: 474 AVRVLKEMRE---QGIAPDTFC-----YNSLIIGLSKAKKMDEARSFLLEMVENG----F 521
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRC--------------------------- 240
+P +Y + ++ G+ + E + C
Sbjct: 522 KPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACS 581
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLI 297
F+ MV GI D + ++ G + + VNDA IFH+M G+ P+ FSY LI
Sbjct: 582 AFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIA----PDVFSYGTLI 637
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
G G + A + DEM + G + YN L+ +GE+E+ + L EM K P
Sbjct: 638 DGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFP 697
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ +TY T++D C+ G EA +L E++ K L+ D + YT L+D
Sbjct: 698 PNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVD 743
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 19/243 (7%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT---EALYNTIIYFFAEARKL 189
F+ DA TY A + D V +ML CG + L +I + + K+
Sbjct: 521 FKPDAFTYGAFISGYIEAGEFASADKYVKEMLE----CGVIPNKVLCTGLINEYCKKGKV 576
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A F+ M L ++Y +L + GK + F +M G
Sbjct: 577 IEACSAFRSMVEQGIL---GDAKTYTVLMNGLVKNGKVNDAEEI--------FHEMRGKG 625
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
I PD+FS ++I G+ ++ A IF +M V N Y+ L+ G C G + A
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEM-VQAGLTSNVIIYNMLLGGFCRSGEIEKA 684
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+EL DEM KGF P++ +Y +++ +G++ E + EM K D Y T++D
Sbjct: 685 KELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDG 744
Query: 370 ICR 372
CR
Sbjct: 745 CCR 747
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 24/247 (9%)
Query: 172 TEALYNTIIYFFAE--ARKLSRAVYVFKYMKNSR-NLECRPSIRSYNILFTAFLSRGKNT 228
+AL++ +I F AR + + F KN R E I+ NI+ + + T
Sbjct: 369 AKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPY------T 422
Query: 229 YINHVY-------METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM- 280
Y V ++ + K+M G P++ ++IK ++ + DA+R+ +M
Sbjct: 423 YGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR 482
Query: 281 --GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
G+ P++F Y+ LI GL + AR EM GF P + +Y + +S
Sbjct: 483 EQGIA----PDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEA 538
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
GE K + EM+E + + +++E C++G+ EA + + + ++ D TY
Sbjct: 539 GEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTY 598
Query: 398 TKLLDVL 404
T L++ L
Sbjct: 599 TVLMNGL 605
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 13/251 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y I+ L + + +V++M+ + F +Y+ I ++ + +A +
Sbjct: 314 DNVAYSILIDGLLKGRNADAANGLVHEMV-SHGFSIDPMMYDYFICVMSKEGAMEKAKAL 372
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M P R+Y L F R KN + + I+ N I P +
Sbjct: 373 FDGM---ITFGVTPGARAYASLIEGFF-REKNVRKGYELLVEIK-----KRNIVISP--Y 421
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ + +KG S ++ A I +MG PN Y LI + R +A + E
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGA-SGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKE 480
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+ +G P + YNSL+ L+ +++E L EM+E D TY + G
Sbjct: 481 MREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGE 540
Query: 376 AGEAMKLLKEL 386
A K +KE+
Sbjct: 541 FASADKYVKEM 551
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 90/195 (46%), Gaps = 20/195 (10%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL-----S 267
+Y+IL L +G+N + L +MV+ G FS++ M+ Y +
Sbjct: 317 AYSILIDGLL-KGRNA-------DAANGLVHEMVSHG-----FSIDPMMYDYFICVMSKE 363
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ A +F M + + P + +Y LI G + + EL E+K++ V S +
Sbjct: 364 GAMEKAKALFDGM-ITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYT 422
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y + V + +G+++ + EM + + Y T++ ++ R G+A+++LKE++
Sbjct: 423 YGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR 482
Query: 388 NKNLI-DGYTYTKLL 401
+ + D + Y L+
Sbjct: 483 EQGIAPDTFCYNSLI 497
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 118/326 (36%), Gaps = 76/326 (23%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQM----LATPSFCGTEALYNTIIYFFAEARKLSR 191
DA TY ++ L + +++ ++M +A F Y T+I F++ + +
Sbjct: 594 DAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFS-----YGTLIDGFSKLGNMQK 648
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------------------------- 226
A +F M + ++ YN+L F G+
Sbjct: 649 ASSIFDEMVQAG---LTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCT 705
Query: 227 --NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ----- 279
+ Y + LF +M G+ PD F +++ G N V A+ IF
Sbjct: 706 IIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGC 765
Query: 280 ------MGVVYNYL--------------------------PNSFSYDYLIHGLCAQGRTK 307
+ N++ PN +Y+ +I LC +G +
Sbjct: 766 ASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLE 825
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A+EL M++ +P+ +Y SL++ G E E+I D I Y ++
Sbjct: 826 AAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVII 885
Query: 368 DEICRRGRAGEAMKLLKELQNKNLID 393
+ + G +A+ LL ++ KN +D
Sbjct: 886 NAFLKEGMTTKALVLLDQMFAKNAVD 911
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
L+ +I + E L AV+VF K+ +L+ PS+ N L A L R + VY
Sbjct: 154 LFGILIDGYIEKGFLDEAVFVFSSTKD-LDLDLVPSLARCNHLLDALLKRNRLDLFWDVY 212
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA----LRIFHQMGVVY------ 284
K MV + D+ S +I + +V A L+ ++G
Sbjct: 213 --------KGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEA 264
Query: 285 ----------NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+P+ SY+ LI GLC Q R ++A+ L EM G + +Y+ L+
Sbjct: 265 LELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDG 324
Query: 335 LALNGEVEETVKNLW-EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
L L G + L EM+ +D + Y IC + G AM+ K L + +
Sbjct: 325 L-LKGRNADAANGLVHEMVSHGFSIDPMMYDYF---ICVMSKEG-AMEKAKALFDGMITF 379
Query: 394 GYT 396
G T
Sbjct: 380 GVT 382
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
+ M S + +P+ +YNI+ G +E + LF M + P + +
Sbjct: 794 RLMDGSFDKFGKPNDVTYNIMIDYLCKEGN--------LEAAKELFHHMQKANLMPTVIT 845
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
S++ GY ++ +F ++ + P++ Y +I+ +G T A L D+M
Sbjct: 846 YTSLLNGYDKMGRRSEMFSVFDEV-IAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQM 904
Query: 317 KRKGFVP-----SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
K V S + +L+S A GE+E K + M+ + D T +++E C
Sbjct: 905 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 104/259 (40%), Gaps = 20/259 (7%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
A+ +Q D++ + L SF +Y T++ + RA+ +F+ N + C
Sbjct: 717 AEAFQLFDEMKLKGLVPDSF-----VYTTLVDGCCRLNDVERAITIFE--TNEKG--CAS 767
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
S +N L GK + + I L + +P+ + N MI +
Sbjct: 768 SSAPFNALINWVFKFGKT----ELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGN 823
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ A +FH M N +P +Y L++G GR + DE+ G P + Y+
Sbjct: 824 LEAAKELFHHMQKA-NLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYS 882
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVD-----FITYRTVLDEICRRGRAGEAMKLLK 384
+++A G + + L +M K D T R +L + G A K+++
Sbjct: 883 VIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVE 942
Query: 385 EL-QNKNLIDGYTYTKLLD 402
+ + K + D T +L++
Sbjct: 943 NMVRLKYIPDSSTVIELIN 961
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 140/275 (50%), Gaps = 17/275 (6%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-TEALYNTIIYFFAEARKLSR 191
FRH T+ +M +L +A ++ ++++ +M C TE ++ +I + K
Sbjct: 46 FRHSHQTFSLMISRLVSANHFRLAEELLCRM--KEEKCNITEDIFLSICRAYGRVHKPLD 103
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
AV VF+ MK EC PS +SY +F + G+N ++ ++ M GI
Sbjct: 104 AVRVFRKMKE---YECEPSQKSYITVFAILV--GENQ------LKLALRFYRYMREMGIP 152
Query: 252 PDIFSLNSMIKGYIL-SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P + SLN +IK S ++ ALRIF +M P+S++Y LI+GLC G+ A+
Sbjct: 153 PSVASLNVLIKALCKNSGTMDAALRIFREMPN-RGCPPDSYTYGTLINGLCRLGKIGEAK 211
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
EL EM+ K P+ +Y SL+ L + +++ ++ L EM K + TY +++D
Sbjct: 212 ELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGH 271
Query: 371 CRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
C+ G + A++LL + ++L + TY+ L+ L
Sbjct: 272 CKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGL 306
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I K+ A +FK M+ C P++ +Y L L + K+ +
Sbjct: 194 YGTLINGLCRLGKIGEAKELFKEMETK---ACSPTVVTYTSLIHG-LCQSKD-------L 242
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++ L ++M + GI+P++F+ +S++ G+ S + AL + M V +LPN +Y
Sbjct: 243 DSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMM-VSRRHLPNMITYST 301
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
L+HGLC +G+ + A E+ D MK +G P + Y ++S + E L EM+
Sbjct: 302 LVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMV 358
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ A+ +F+ M N C P +Y L GK + + LFK+M
Sbjct: 172 MDAALRIFREMPNR---GCPPDSYTYGTLINGLCRLGK--------IGEAKELFKEMETK 220
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
P + + S+I G S ++ A+R+ +M PN F+Y L+ G C G +
Sbjct: 221 ACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMAS-KGIKPNVFTYSSLMDGHCKSGCSSR 279
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM-IEKQRPVDFITYRTVL 367
A EL D M + +P+ +Y++LV L G+++E V+ L M ++ RP D Y ++
Sbjct: 280 ALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRP-DAGLYGKII 338
Query: 368 DEICRRGRAGEAMKLLKEL 386
C + EA L E+
Sbjct: 339 SGFCDICKFHEAANFLDEM 357
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
SRA+ + M + R+L P++ +Y+ L GK E + + +M G
Sbjct: 278 SRALELLDMMVSRRHL---PNMITYSTLVHGLCKEGK-------LQEAVE-ILDRMKLQG 326
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY-------DYLIHGLCA 302
+ PD +I G+ ++A +M V+ PN ++ + ++ GLC
Sbjct: 327 LRPDAGLYGKIISGFCDICKFHEAANFLDEM-VLGGISPNRLTWSLHVRIHNIVVQGLCT 385
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ A +L M+ +G +K+++SLV+ G++ + + EM+ D +T
Sbjct: 386 E-HPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVT 444
Query: 363 YRTVLDEICRRGRAGEAMKLLK 384
+ V+ R + E+ +L++
Sbjct: 445 WNAVVCAFWDRRKVRESAELVQ 466
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 60/328 (18%)
Query: 125 NWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML-------------ATPSFCG 171
NW S P FRH + +Y M L A +M+QE ++ ++ A G
Sbjct: 89 NWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG 148
Query: 172 TEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR-------------------- 208
T +++ ++ + ++ +S A+ F+ ++NS N +
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNS-NFQIPFHGCGYLLDKMINSNSPVTI 207
Query: 209 -------------PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
P ++ YNIL F G + + +F ++ G+ P
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGS--------IRDAKLIFNEIRKRGLRPTTV 259
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N++I G S ++++ R+ M Y P+ F+Y LIHGLC +GR A +L DE
Sbjct: 260 SFNTLINGLCKSRNLDEGFRLKKTMEENRIY-PDVFTYSVLIHGLCKEGRLDVAEQLFDE 318
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+++G P+ ++ +L+ + ++ + +M+ D + Y T+L+ +C+ G
Sbjct: 319 MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+A KL+ E++ + D TYT L+D
Sbjct: 379 VNKARKLVDEMKMVGMKPDKITYTTLID 406
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 47/251 (18%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T +NT+I ++R L + K M+ +R P + +Y++L G+
Sbjct: 257 TTVSFNTLINGLCKSRNLDEGFRLKKTMEENR---IYPDVFTYSVLIHGLCKEGR----- 308
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
++ LF +M G+ P+ + ++I G S ++ A+ +HQM + P+
Sbjct: 309 ---LDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQM-LTMGVKPDLV 364
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV------------------- 332
Y+ L++GLC G AR+L DEMK G P +Y +L+
Sbjct: 365 MYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGM 424
Query: 333 ----------------SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
S +G V + + L EM+E D TY V+D C++G
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNV 484
Query: 377 GEAMKLLKELQ 387
KLLKE+Q
Sbjct: 485 KMGFKLLKEMQ 495
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 15/224 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YNT++ + +++A + MK + +P +Y L + G
Sbjct: 364 VMYNTLLNGLCKVGDVNKARKLVDEMKM---VGMKPDKITYTTLIDGYCKEGD------- 413
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+E+ + K M +G+ D + ++I G+ V DA R +M V P+ +Y
Sbjct: 414 -LESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREM-VEAGMKPDDATY 471
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+I G C +G K +L EM+ G P +YN L++ L G+++ L M+
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN 531
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTY 397
D ITY +L+ C+ G+A + +KL E K LI Y Y
Sbjct: 532 LGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAY 572
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 133/273 (48%), Gaps = 14/273 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ DA TY + AKM + V QML + + T YN I+ +A +++ A
Sbjct: 355 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVST-VTYNIILDGLCKAGRVAEA 413
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
F M+ C ++ +Y+ L F S G + LF++M++ G EP
Sbjct: 414 YATFLAMEER---GCVATVVTYSALMDGFCSEGNVSAAVE--------LFRRMLDRGCEP 462
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT-KNARE 311
++ S N +I+G + + A F ++ + P+ ++++ +HGLC + T + E
Sbjct: 463 NLVSYNIIIRGLCRAGKLAKAYFYFEKL-LQRRLCPDVYTFNSFLHGLCQRLDTVGDGVE 521
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L + M +G P+ SY+ L+ + G +E T++ EM+ + D + + T++ +C
Sbjct: 522 LFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLC 581
Query: 372 RRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
GR EA+++ +EL+ ++ D ++Y LLD L
Sbjct: 582 IAGRVDEALEVFRELERRSAPDAWSYWSLLDAL 614
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 17/273 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLS 190
R DA Y + L E +NQM+ G E ++N +I + L
Sbjct: 178 RPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLE 237
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A+ F + +S +L + ++N L A L + + T E K+M
Sbjct: 238 DALAYFDELDDSLDL----THFTFNPLVAA-LCKAERT-------EEAIAFVKKMSERRC 285
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P +F+ S++ G++ +++AL + V ++P++ +Y +I GLC GR +
Sbjct: 286 FPTLFTYTSLVDGFLKLGRLDEALLQLKE-AVERGFIPDAVTYTSIIDGLCKLGRVEEGC 344
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
E EM+ +G+ P + +Y +L+ + + + +M++ V +TY +LD +
Sbjct: 345 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 404
Query: 371 CRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
C+ GR EA ++ + + TY+ L+D
Sbjct: 405 CKAGRVAEAYATFLAMEERGCVATVVTYSALMD 437
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD+ + +I G +++A + + V P+ +Y+ I GLC R +A +
Sbjct: 39 PDMVAFTVVINGLCREKRLDEAFSVLER-AVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 97
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L +M K +P++ +Y +LV L G ++E + L +M+EK TY V+D +
Sbjct: 98 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLS 157
Query: 372 RRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLDVL 404
+ GR EA ++ + L N D + YT L+ L
Sbjct: 158 KAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L RA+ + M C P + ++ ++ L R K ++ + ++ V
Sbjct: 24 QLDRAMLLLDEMP------CSPDMVAFTVVING-LCREKR-------LDEAFSVLERAVR 69
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G EPD + N I G + V+DA ++ +M LP + +Y L+ GL GR
Sbjct: 70 AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDE-KKCLPTTVTYTALVDGLLKAGRLD 128
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A + ++M KG P+ K+Y ++ L+ G VEE + +M+ D Y ++
Sbjct: 129 EAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALI 188
Query: 368 DEICRRGRAGEAMKLLKEL 386
+ + G+ EA+ L ++
Sbjct: 189 SGLAKIGKLDEALVYLNQM 207
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 20/250 (8%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
++++M +P + +I ++L A F ++ + C P +YN+
Sbjct: 31 LLDEMPCSPDMVA----FTVVINGLCREKRLDEA---FSVLERAVRAGCEPDYVTYNVFI 83
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
K ++ + L K+M P + +++ G + + +++A+ I
Sbjct: 84 DGLC---KAERVDDAFQ-----LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILE 135
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
QM V P +Y +I GL GR + AR + +M G P + Y +L+S LA
Sbjct: 136 QM-VEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKI 194
Query: 339 GEVEETVKNLWEMIEK--QRPV--DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
G+++E + L +M+E R V D + + V+ ++C G +A+ EL + +
Sbjct: 195 GKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTH 254
Query: 395 YTYTKLLDVL 404
+T+ L+ L
Sbjct: 255 FTFNPLVAAL 264
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L++GLC G+ A L DEM P ++ +++ L ++E L +
Sbjct: 15 LLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
D++TY +D +C+ R +A +LLK++ K L TYT L+D L
Sbjct: 72 CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGL 121
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 127/258 (49%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT+I + + L + M S
Sbjct: 148 KEGEMRLAQSVFDAITKWGLRPSVVS----FNTLINGYIKLGDLDEGFRLKSAMHASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y+IL GK N LF +M+++G+ P+ + ++I G+
Sbjct: 202 -AQPDVYTYSILINGLCKEGKLDEANE--------LFNEMLDNGLVPNGVTFTTLIHGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + P+ +Y+ LI+GLC +G K +L DEM G P
Sbjct: 253 KNEKVDLAMEIYKQM-LSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
SY +L+ G++E ++ +MI++ +D + Y ++ +CR GRAG+A K+L+E
Sbjct: 312 ISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLRE 371
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 372 MLSVGLKPDNGTYTMIIN 389
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
Y + + ++ L+ C +G + A+ + D + + G PS S+N+L++ G+++E
Sbjct: 131 GYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEG 190
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ M D TY +++ +C+ G+ EA +L E+ + L+ +G T+T L+
Sbjct: 191 FRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLI 248
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 152/337 (45%), Gaps = 67/337 (19%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT- 172
+ DP L++FN S+Q F H+ +TY + + L K +Q +D V++QM T C
Sbjct: 60 ERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQM--TYDTCKVH 117
Query: 173 EALYNTIIYFFAEARKLSRAVYVF---------------------------------KYM 199
E ++ ++ F+++ R + +F K +
Sbjct: 118 EGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLL 177
Query: 200 KNSRN-LECRPSIRSYNILF----------TAF-----LSRGKNTYINHVYMETI---RC 240
N+R+ L RP+ +NIL AF + + +Y N V T+ C
Sbjct: 178 VNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLC 237
Query: 241 ----------LFKQMVN-DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
F++MV+ D I PD + N +I G+ V+ A I M PN
Sbjct: 238 ENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMK-SNGCSPN 296
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
F+Y L++G C +GR + A+E+ +E+K G P + SY +L++ L G V+E + L
Sbjct: 297 VFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQ 356
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+M +K D +T+ +L +CR GR EA+ ++++L
Sbjct: 357 QMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKL 393
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 118/275 (42%), Gaps = 31/275 (11%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + L +E + +M++ + YN +I F + K+ RA + ++
Sbjct: 228 TYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEF 287
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET---------------IRCL-- 241
MK++ C P++ +Y++L + G+ V+ E I CL
Sbjct: 288 MKSNG---CSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCR 344
Query: 242 ----------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+QM + D + N M+ G ++AL + ++ YL N
Sbjct: 345 TGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYL-NKG 403
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
SY +++ L +G + A EL M +GFVP + N+L+ L NG V++ V++L +
Sbjct: 404 SYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGL 463
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+E + ++ T++D ICR + +LL L
Sbjct: 464 LEMGFKPEHESWFTLVDLICRERKMLPVFELLDVL 498
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 149/344 (43%), Gaps = 59/344 (17%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ +L P + ++ DP L FNW + +P F+H+ +Y M L A++
Sbjct: 58 SLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL 117
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
+ + M+ S C E + F E VF+ M + +P++R
Sbjct: 118 GVAEKIRISMIK--SCCSIED-----VLFVLE---------VFRKMNADGEFKFKPTLRC 161
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN T +S K I+ ++ ++ +++N+ I P+I++ N+M+ GY +V +A
Sbjct: 162 YN---TILMSLSKFLLIDE-----MKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA 213
Query: 274 ---------------------LRIFH--QMGV-----VYNYLP------NSFSYDYLIHG 299
L + H GV V+ +P N SY LIHG
Sbjct: 214 ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC GR A +L +M P+ ++Y L+ AL+ +G E + EM EK +
Sbjct: 274 LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
TY ++D +C+ + EA K+L E+ K LI TY L+D
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALID 377
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 115/233 (49%), Gaps = 13/233 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y +I+ EA +++ A+ +F M C P++R+Y +L A G+
Sbjct: 264 EVSYTNLIHGLCEAGRINEALKLFADMTEDN---CCPTVRTYTVLIYALSGSGRK----- 315
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+E + LF +M G EP++ + +I G N +++A ++ +M +P+ +
Sbjct: 316 --VEALN-LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE-KGLIPSVVT 371
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI G C +G +A E+ D M+ P++++YN L+ L +V + + L +M+
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
E++ ITY +++ C+ A +LL + L+ D +TY+ +D L
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
C T Y +IY + + + A+ +F MK C P++ +Y +L K
Sbjct: 296 CPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG---CEPNVHTYTVLIDGLCKENK--- 349
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
M+ R + +M G+ P + + N++I GY ++DA I M + PN
Sbjct: 350 -----MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES-NSCGPN 403
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ +Y+ LI GLC + + A L ++M + PS +YNSL+ ++E + L
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTK 399
M E D TY +D +C+ GR EA L ++ K LIDGY
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523
Query: 400 LLDV 403
+DV
Sbjct: 524 KIDV 527
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 24/292 (8%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCG 171
+D L+L S P R TY+ + L + + ++N+ML +PS
Sbjct: 386 DDAFEILDLMESNSCGPNTR----TYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
YN++I+ + L A + M N L P +Y++ G+
Sbjct: 442 ----YNSLIHGQCKVNDLESAYRLLSLM-NENGL--VPDQWTYSVFIDTLCKEGR----- 489
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+E LF + G++ + ++I GY ++ A + +M + LPNS+
Sbjct: 490 ---VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM-LNDACLPNSY 545
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LI GLC + + K A L +M G P+ +Y L+ + +G + +K M
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ D TY L +G E ++ ++ + ++ D TYT L+D
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 78/175 (44%), Gaps = 5/175 (2%)
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+++ +++TA + + Y ++ L ++M+ND P+ ++ N +I+G
Sbjct: 504 GVKANEVIYTALI----DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ +A + +M + P +Y LI + G +A ++ + M G+ P +Y
Sbjct: 560 MKEASSLVAKM-LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ + A G +EE + +M E+ D +TY ++D R G A LK
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 19/221 (8%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
++ D TY + M +E+DDV+ +M Y +I +A RA
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM-NEEGILPDLVTYTVLIDGYARLGLTHRA 668
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
F ++K + C+PS+ +IL KN + ET + V++
Sbjct: 669 ---FDFLKCMVDTGCKPSLYIVSILI-------KNLSHENRMKETRSEIGIDSVSNVNSV 718
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
DI + ++ I AL++F +M V + + Y LI G C Q R + A+ L
Sbjct: 719 DIADVWKTLEYEI-------ALKLFEKM-VEHGCTIDVSIYGALIAGFCQQERLEEAQGL 770
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
MK +G PS YNSL+ G E V+ + M+E
Sbjct: 771 VHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVE 811
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 110/295 (37%), Gaps = 48/295 (16%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+++ L K +E +V +ML T T Y +I + A+ VF +
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKML-TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M +L +P + +Y A+ S+G +E + + +M +GI PD+ +
Sbjct: 605 M---VSLGYQPDVCTYTAFLHAYFSQG--------MLEEVDDVIAKMNEEGILPDLVTYT 653
Query: 259 SMIKGYI---LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR----- 310
+I GY L++ D L+ G P+ + LI L + R K R
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCK----PSLYIVSILIKNLSHENRMKETRSEIGI 709
Query: 311 ------------------------ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+L ++M G Y +L++ +EE
Sbjct: 710 DSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQG 769
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
+ M E+ Y ++LD C+ G EA++L+ + L+ KLL
Sbjct: 770 LVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLL 824
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 130/283 (45%), Gaps = 14/283 (4%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
ELFN K+ D Y+++ KM E V+ + L + T A YN++I
Sbjct: 321 ELFNRMVKR-GLEPDVLNYNVLIDGYCKTKMVDEAM-VLFKELCNKNLVPTIASYNSLID 378
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ ++S + M S P + +YNIL A G+ +E + L
Sbjct: 379 GLCNSGRISHVKKLLDEMHGSAQ---PPDVVTYNILIDALCKEGR-------ILEALGVL 428
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
M+ G++P+I + N+M+ GY L N+VN A IF++M V P+ +Y+ LI+G C
Sbjct: 429 V-MMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM-VKSGLEPDILNYNVLINGYC 486
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
A L EM+ K +P SYNSL+ L G + + L EM + + D I
Sbjct: 487 KTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVI 546
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
TY +LD C+ +A+ L +++ D YT ++D L
Sbjct: 547 TYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNL 589
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 19/219 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P ++NIL A G+ + + + M G +PDI + N++++GY
Sbjct: 263 PDDYTFNILIDALCKEGR--------ILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRE 314
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+V++A +F++M V P+ +Y+ LI G C A L E+ K VP+ SY
Sbjct: 315 NVHEARELFNRM-VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
NSL+ L +G + K L EM +P D +TY ++D +C+ GR EA+ +L +
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 389 KN----------LIDGYTYTKLLDVLEDDFGNSIRHHLR 417
K ++DGY ++V +D F ++ L
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PSI ++ IL N Y + + L ++ G +P++ + N++I G+ ++
Sbjct: 88 PSIATFTILI--------NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCING 139
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ AL F Q + YL + F+Y LI+GL G+ K A L EM++ P+ Y
Sbjct: 140 MIFKALD-FCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMY 198
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
++L+ L +G V + + ++ E+ +D +TY +++D C GR E +LL ++
Sbjct: 199 SALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258
Query: 389 KNL-IDGYTYTKLLDVL 404
+N+ D YT+ L+D L
Sbjct: 259 ENVDPDDYTFNILIDAL 275
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + + + A+ +FK M++ +NL P I SYN L + G+ I HV
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRH-KNL--IPDIASYNSLIDGLCNLGR---IPHV-- 529
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L +M + G PD+ + N ++ + + + A+ +F Q +V P+ ++
Sbjct: 530 ---QELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQ--IVEGIWPDFYTNHA 584
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ LC + K A + + G P+ ++Y L++AL +G E + L +M +
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDND 644
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
RP D IT+ ++ + +R +A KL +E+ + L++
Sbjct: 645 RPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVN 682
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I ++ ++ A+++ + M+ S +P++ Y+ L G ++
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKS---SVQPNLVMYSALIDGLCKDG--------FV 211
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L Q+ GI D + NS+I G + ++ +M V N P+ ++++
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM-VRENVDPDDYTFNI 270
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI LC +GR A+ + M ++G P +YN+L+ V E + M+++
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
D + Y ++D C+ EAM L KEL NKNL+ +Y L+D L
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGL 380
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 149/344 (43%), Gaps = 59/344 (17%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ +L P + ++ DP L FNW + +P F+H+ +Y M L A++
Sbjct: 58 SLRKLLPSLTPSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL 117
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
+ + M+ S C E + F E VF+ M + +P++R
Sbjct: 118 GVAEKIRISMIK--SCCSIED-----VLFVLE---------VFRKMNADGEFKFKPTLRC 161
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN T +S K I+ ++ ++ +++N+ I P+I++ N+M+ GY +V +A
Sbjct: 162 YN---TILMSLSKFLLIDE-----MKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA 213
Query: 274 ---------------------LRIFH--QMGV-----VYNYLP------NSFSYDYLIHG 299
L + H GV V+ +P N SY LIHG
Sbjct: 214 ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC GR A +L +M P+ ++Y L+ AL+ +G E + EM EK +
Sbjct: 274 LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPN 333
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
TY ++D +C+ + EA K+L E+ K LI TY L+D
Sbjct: 334 VHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALID 377
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 115/233 (49%), Gaps = 13/233 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y +I+ EA +++ A+ +F M C P++R+Y +L A G+
Sbjct: 264 EVSYTNLIHGLCEAGRINEALKLFADMTEDN---CCPTVRTYTVLIYALSGSGRK----- 315
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+E + LF +M G EP++ + +I G N +++A ++ +M +P+ +
Sbjct: 316 --VEALN-LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE-KGLIPSVVT 371
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI G C +G +A E+ D M+ P++++YN L+ L +V + + L +M+
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
E++ ITY +++ C+ A +LL + L+ D +TY+ +D L
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
C T Y +IY + + + A+ +F MK C P++ +Y +L K
Sbjct: 296 CPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG---CEPNVHTYTVLIDGLCKENK--- 349
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
M+ R + +M G+ P + + N++I GY ++DA I M + PN
Sbjct: 350 -----MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES-NSCGPN 403
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ +Y+ LI GLC + + A L ++M + PS +YNSL+ ++E + L
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLS 463
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTK 399
M E D TY +D +C+ GR EA L ++ K LIDGY
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523
Query: 400 LLDV 403
+DV
Sbjct: 524 KIDV 527
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 24/292 (8%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCG 171
+D L+L S P R TY+ + L + + ++N+ML +PS
Sbjct: 386 DDAFEILDLMESNSCGPNTR----TYNELICGLCKKRKVHKAMALLNKMLERKLSPSL-- 439
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
YN++I+ + L A + M N L P +Y++ G+
Sbjct: 440 --ITYNSLIHGQCKVNDLESAYRLLSLM-NENGL--VPDQWTYSVFIDTLCKEGR----- 489
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+E LF + G++ + ++I GY ++ A + +M + LPNS+
Sbjct: 490 ---VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM-LNDACLPNSY 545
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LI GLC + + K A L +M G P+ +Y L+ + +G + +K M
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ D TY L +G E ++ ++ + ++ D TYT L+D
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 110/284 (38%), Gaps = 37/284 (13%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+++ L K +E +V +ML T T Y +I + A+ VF +
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKML-TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M +L +P + +Y A+ S+G +E + + +M +GI PD+ +
Sbjct: 605 M---VSLGYQPDVCTYTAFLHAYFSQG--------MLEEVDDVIAKMNEEGILPDLVTYT 653
Query: 259 SMIKGYI---LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR----- 310
+I GY L++ D L+ G P+ + LI L + R K R
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCK----PSLYIVSILIKNLSHENRMKETRSEIGI 709
Query: 311 -------------ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
+L ++M G Y +L++ +EE + M E+
Sbjct: 710 DSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMS 769
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
Y ++LD C+ G EA++L+ + L+ KLL
Sbjct: 770 PSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLL 813
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 78/175 (44%), Gaps = 5/175 (2%)
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+++ +++TA + + Y ++ L ++M+ND P+ ++ N +I+G
Sbjct: 504 GVKANEVIYTALI----DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ +A + +M + P +Y LI + G +A ++ + M G+ P +Y
Sbjct: 560 MKEASSLVAKM-LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ + A G +EE + +M E+ D +TY ++D R G A LK
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673
>gi|110742004|dbj|BAE98941.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 497
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 147/318 (46%), Gaps = 39/318 (12%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT--------EA 174
+FNWA+ FRHD ++ M+R L A + ++ +++ + A P C + E
Sbjct: 99 VFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEP 158
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------- 226
++ + I + ARK+ A+ F MK R ++ +P++ YN + ++ G
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMK--RLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 227 -------------------NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
N Y + LF++M G EP++ S N++I+G++ S
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ + +++ ++M + + + + L+ GLC +GR +A L ++ K +PS
Sbjct: 277 GKIEEGVKMAYEM-IELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFD 335
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y SLV L + ++ + E+ +K + FI T+++ + + GR +A ++++
Sbjct: 336 YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMM 395
Query: 388 NKNLI-DGYTYTKLLDVL 404
N ++ D T+ LL L
Sbjct: 396 NAGILPDSVTFNLLLGDL 413
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME + L+K+ G P + ++++G S A +M + LP+S +++
Sbjct: 353 MEMMEELWKK----GQTPCFIACTTLVEGLRKSGRTEKASGFMEKM-MNAGILPDSVTFN 407
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ LC+ + +A L KG+ P +Y+ LVS G +E + EM++K
Sbjct: 408 LLLGDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDK 467
Query: 355 QRPVDFITYRTVLDEICRRGR 375
D TY ++D + G+
Sbjct: 468 DMLPDIFTYNRLMDGLSCTGK 488
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 122/262 (46%), Gaps = 18/262 (6%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F D TY + L A ++ D+ +M P T YN++I + A + A
Sbjct: 251 FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAP----TAITYNSLIGGYCRAGDMDEA 306
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M + C P + +Y L +AF G+ ++ Y LF+QMV + + P
Sbjct: 307 IRLLGKMVDD---NCAPDVITYTTLMSAFCKMGR---LDDAYE-----LFQQMVANKLSP 355
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + S++ G + DAL + ++ P ++Y+ ++ G C + + A EL
Sbjct: 356 DVVTFTSLVDGLCGEGRMEDALELLEEI-TRRGCPPTIYTYNCVVDGYCKSNQVRKAEEL 414
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR--PVDFITYRTVLDEI 370
+ + +GFVP++ +YN LV+ G ++ ++ L ++ + P Y +LD +
Sbjct: 415 VADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDAL 474
Query: 371 CRRGRAGEAMKLLKELQNKNLI 392
CR GR +A++ +E+ + +
Sbjct: 475 CRDGRTDDAVQFYEEMIQRGYV 496
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 16/274 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D+ST+ ++ R L A+ + + ++ + NTI+ +AR + A
Sbjct: 6 YPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTA 65
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F M L YN++ +R ++ L M + G+ P
Sbjct: 66 MALFDKMAE---LGAVNHTTYYNLIHPLCKAR---------LLDEAMGLLLDMKSRGMNP 113
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
N +I G + + AL ++ QM + P+ +Y L+HGL GR ++A ++
Sbjct: 114 GTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP--PDFLTYTKLVHGLSKAGRLRDAVQV 171
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM VP + + +V +L L V++ + + EM+ + + ITY ++D +C+
Sbjct: 172 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 231
Query: 373 RGRAGEAMK-LLKELQNKNLI-DGYTYTKLLDVL 404
R EA+ LL E+ + D TY+ ++D L
Sbjct: 232 CERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGL 265
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 17/261 (6%)
Query: 134 RH--DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
RH D +T ++ + L + ++V +ML Y+ ++ + +L
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHR-GMAANAITYSALVDGLCKCERLDE 237
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
AV + R P I +Y+ + G+ + +F++M
Sbjct: 238 AVALLLGEVTRRGFT--PDIVTYSTVIDGLCKAGR--------LRDAVDIFEEM---SCA 284
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + NS+I GY + +++A+R+ +M V N P+ +Y L+ C GR +A E
Sbjct: 285 PTAITYNSLIGGYCRAGDMDEAIRLLGKM-VDDNCAPDVITYTTLMSAFCKMGRLDDAYE 343
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L +M P ++ SLV L G +E+ ++ L E+ + P TY V+D C
Sbjct: 344 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 403
Query: 372 RRGRAGEAMKLLKELQNKNLI 392
+ + +A +L+ + +++ +
Sbjct: 404 KSNQVRKAEELVADFRSRGFV 424
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 150/352 (42%), Gaps = 62/352 (17%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q D L LFN ASK+P F + + Y + +LG + + +M ++ M ++ GT
Sbjct: 60 QPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGT- 118
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE--------------------------- 206
+ + +I +A+ + V +M + L+
Sbjct: 119 STFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA 178
Query: 207 ------CRPSIRSYNILFTAF---------------------------LSRGKNTYINHV 233
+P + ++N+L A + YI
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
++ + +QMV G S+N ++ G+ V DAL +M + P+ +++
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L++GLC G K+A E+ D M ++G+ P +YNS++S L GEV+E V+ L +MI
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ + +TY T++ +C+ + EA +L + L +K ++ D T+ L+ L
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
P C +N++I R A+ +F+ M R+ C P +YN+L + S+GK
Sbjct: 398 PDVC----TFNSLIQGLCLTRNHRVAMELFEEM---RSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
++ + KQM G + + N++I G+ +N +A IF +M V +
Sbjct: 451 --------LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV-HGV 501
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
NS +Y+ LI GLC R ++A +L D+M +G P +YNSL++ G++++
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ M D +TY T++ +C+ GR A KLL+ +Q K +
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N I++ F + ++ A+ + M N P ++N L G ++ H
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGF--FPDQYTFNTLVNGLCKAG---HVKHAIE- 316
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ M+ +G +PD+++ NS+I G V +A+ + QM + + PN+ +Y+ L
Sbjct: 317 ----IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM-ITRDCSPNTVTYNTL 371
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I LC + + + A EL + KG +P ++NSL+ L L ++ EM K
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQ----------NKNLIDGY 395
D TY ++D +C +G+ EA+ +LK+++ LIDG+
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 24/289 (8%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YN 177
V +ELF + D TY+++ L + E +++ QM S C + YN
Sbjct: 418 VAMELFE-EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM--ELSGCARSVITYN 474
Query: 178 TIIYFFAEARKLSRAVYVFKYMKN---SRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
T+I F +A K A +F M+ SRN S+ +YN L +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRN-----SV-TYNTLIDGLCKSRR-------- 520
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E L QM+ +G +PD ++ NS++ + + A I M P+ +Y
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM-TSNGCEPDIVTYG 579
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GLC GR + A +L ++ KG + +YN ++ L + E + EM+E+
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Query: 355 -QRPVDFITYRTVLDEICRRGRA-GEAMKLLKELQNKNLIDGYTYTKLL 401
+ P D ++YR V +C G EA+ L EL K + ++ +L
Sbjct: 640 NEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 14/218 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
++ TY+ + L ++ ++ +++QM+ + YN+++ F + +A +
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK-PDKYTYNSLLTHFCRGGDIKKAADI 562
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M ++ C P I +Y L + G+ +E L + + GI
Sbjct: 563 VQAMTSNG---CEPDIVTYGTLISGLCKAGR--------VEVASKLLRSIQMKGINLTPH 611
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC-AQGRTKNARELCD 314
+ N +I+G +A+ +F +M P++ SY + GLC G + A +
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
E+ KGFVP S L L L +EET+ L M+
Sbjct: 672 ELLEKGFVPEFSSLYMLAEGL-LTLSMEETLVKLVNMV 708
>gi|79568177|ref|NP_181166.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206301|sp|Q9SJN2.1|PP187_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36240
gi|4510352|gb|AAD21441.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254126|gb|AEC09220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 497
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 146/315 (46%), Gaps = 39/315 (12%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT--------EA 174
+FNWA+ FRHD ++ M+R L A + ++ +++ + A P C + E
Sbjct: 99 VFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEP 158
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------- 226
++ + I + ARK+ A+ F MK R ++ +P++ YN + ++ G
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMK--RLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 227 -------------------NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
N Y + LF++M G EP++ S N++I+G++ S
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ + +++ ++M + + + + L+ GLC +GR +A L ++ K +PS
Sbjct: 277 GKIEEGVKMAYEM-IELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFD 335
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y SLV L + ++ + E+ +K + FI T+++ + + GR +A ++++
Sbjct: 336 YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMM 395
Query: 388 NKNLI-DGYTYTKLL 401
N ++ D T+ LL
Sbjct: 396 NAGILPDSVTFNLLL 410
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME + L+K+ G P + ++++G S A +M + LP+S +++
Sbjct: 353 MEMMEELWKK----GQTPCFIACTTLVEGLRKSGRTEKASGFMEKM-MNAGILPDSVTFN 407
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ LC+ + +A L KG+ P +Y+ LVS G +E + EM++K
Sbjct: 408 LLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDK 467
Query: 355 QRPVDFITYRTVLDEICRRGR 375
D TY ++D + G+
Sbjct: 468 DMLPDIFTYNRLMDGLSCTGK 488
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 36/315 (11%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA+K+ + HD STY + R L + Y EM ++ +M+ P T +
Sbjct: 101 VKMQFFRWAAKKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSD 160
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME-- 236
II A+ +S+AV +F +K + C+P+ ++YN + + G+ ++ +Y E
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKVRK---CQPTAQAYNSMIIMLMHEGQYEKVHELYNEMS 217
Query: 237 ---------------------------TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
IR L +M ++G++P +I + N+
Sbjct: 218 NEGHCFPDTVTYSALISAFCKLGRQDSAIR-LLNEMKDNGMQPTAKIYTMLIALFFKLNN 276
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
V+ AL +F +M Y P+ F+Y LI GL GR A EM+R+G P + N
Sbjct: 277 VHGALGLFEEMRHQYCR-PDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVIN 335
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR-RGRAGEAMKLLKELQN 388
++++ L G +++ VK EM Q +TY T++ + + R E + ++
Sbjct: 336 NMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKG 395
Query: 389 KNLIDG-YTYTKLLD 402
+ +TY+ L+D
Sbjct: 396 SGISPSPFTYSILID 410
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R D TY + R LG A + E + ++M T + N +I F +A +L AV
Sbjct: 293 RPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDT-VVINNMINFLGKAGRLDDAV 351
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTA-FLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F+ M L+C PS+ +YN + A F S+ + + I F++M GI P
Sbjct: 352 KLFEEMGT---LQCIPSVVTYNTIIKALFESKSR--------ISEISSWFERMKGSGISP 400
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS------------ 292
F+ + +I G+ +N A+ + +M Y L ++
Sbjct: 401 SPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELF 460
Query: 293 --------------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y +I L GR +A L DEM + G P+ +YN+L+S LA
Sbjct: 461 QELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARA 520
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTY 397
G ++E + + M E D +Y +L+ + + G AM++L ++ + D +Y
Sbjct: 521 GMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSY 580
Query: 398 TKLLDVL 404
+L +
Sbjct: 581 NTVLGAM 587
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 128/343 (37%), Gaps = 69/343 (20%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRK---------------LGAAKMYQEMDDVV 160
D EL K RF + +H M R+ LG A +DD V
Sbjct: 295 DVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAG---RLDDAV 351
Query: 161 N--QMLATPSFCGTEALYNTIIYFFAEAR-KLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
+ + T + YNTII E++ ++S F+ MK S PS +Y+IL
Sbjct: 352 KLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGS---GISPSPFTYSIL 408
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP----------------------DIF 255
F + E L ++M G P ++F
Sbjct: 409 IDGFCKTNRT--------EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELF 460
Query: 256 S-------------LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
MIK + ++DA+ +F +M + PN ++Y+ L+ GL
Sbjct: 461 QELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKL-GCTPNVYAYNALMSGLAR 519
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
G A M+ G +P SYN +++ LA G ++ L M + D ++
Sbjct: 520 AGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVS 579
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
Y TVL + G EA KL+KE+ D TY+ +L+ +
Sbjct: 580 YNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAI 622
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 22/277 (7%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
R + Y ++ +L + E D+ +M+ Y+ ++ F +L+RA
Sbjct: 194 IRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGK-GISPDVVTYSILVSGFCIVGQLNRA 252
Query: 193 VYVFKYMKNSRNLE-CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
+ + N LE P I +Y IL A GK +V MV +
Sbjct: 253 IDLL----NEMVLENINPDIYTYTILVDALCKEGKVKEAENV--------LAVMVKACVN 300
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFH---QMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
D+ ++++ GY L N VN+A R+F+ QMGV P+ Y +I+GLC R
Sbjct: 301 LDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVT----PDVHCYSIMINGLCKIKRVDE 356
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L +E+ +K VP + +Y SL+ L +G + EM+++ +P D ITY ++D
Sbjct: 357 ALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLID 416
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+C+ G A+ L +++++ + + YT+T LLD L
Sbjct: 417 ALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGL 453
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N I+ ++ A+ ++K M+ S E P + NI+ F G+
Sbjct: 61 FNKILISLVNVKRYPTAISLYKQMELS---EVEPDYFTLNIIINCFCHFGQVVLAFSGVS 117
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ ++ G +P+ +LN+++KG L V +ALR FH + + + SY
Sbjct: 118 KILKL--------GYQPNTITLNTLMKGLCLEGKVKEALR-FHDKVLAQGFRLSGISYGI 168
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G+C G T+ A L ++R P+ Y+ ++ L + V+E EM+ K
Sbjct: 169 LINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKG 228
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +TY ++ C G+ A+ LL E+ +N+ D YTYT L+D L
Sbjct: 229 ISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDAL 278
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 112/233 (48%), Gaps = 16/233 (6%)
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
+ QM TP Y+ +I + +++ A+ +F+ + + +N+ P +Y L
Sbjct: 329 MTQMGVTPDV----HCYSIMINGLCKIKRVDEALNLFEEI-HQKNM--VPDTVTYTSLID 381
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
G+ +Y+ LF +M++ G PD+ + N++I + H++ A+ +F++
Sbjct: 382 CLCKSGRISYVWD--------LFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNK 433
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
M PN +++ L+ GLC GR KNA E ++ KG+ + ++Y +++ L G
Sbjct: 434 MKD-QAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEG 492
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++E + M + D +T+ ++ + +A KL++E+ + L+
Sbjct: 493 LLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 112/216 (51%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y++I++ F + + A +FK M RN+ P ++NIL G + +
Sbjct: 155 YSSILHGFCNLGRSNEATSLFKQMV-ERNV--MPDTVTFNILVDGLSKEG-------MIL 204
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +C+F+ M+ G+EP++ + N+++ GY + +++A ++F+ M V P+ SY+
Sbjct: 205 EA-QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIM-VRKGCAPSVRSYNI 262
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C GR A+ L EM K P + +Y++L+ +G ++ K L EM
Sbjct: 263 LIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYG 322
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D +TY VLD +C++G EA +LLK +Q +
Sbjct: 323 LLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKI 358
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 147/310 (47%), Gaps = 21/310 (6%)
Query: 99 PPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTR---KLGAAKMYQE 155
P L N ++ + + ++LF+ K + D TY + K+G+ M +
Sbjct: 45 PNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMG-YEPDVITYSTIINGLCKMGSTTMAIQ 103
Query: 156 MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
+ + + P+ +Y+TII + + ++ A+ M N R + P++ +Y+
Sbjct: 104 LLKKMEEKGCKPNV----VVYSTIIDSLCKDKLITEAMEFLSEMVN-RGIS--PNVVTYS 156
Query: 216 ILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
+ F + G++ LFKQMV + PD + N ++ G + +A
Sbjct: 157 SILHGFCNLGRSNEATS--------LFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQC 208
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+F M + PN +Y+ L+ G C+Q + A++L + M RKG PS +SYN L+
Sbjct: 209 VFETM-IEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGH 267
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DG 394
+G ++E L EM K D +TY T++ C+ GR +A KLL+E+++ L+ D
Sbjct: 268 CKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDL 327
Query: 395 YTYTKLLDVL 404
TY+ +LD L
Sbjct: 328 MTYSIVLDGL 337
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 8/201 (3%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
RP + + IL F + NH + + M G++P+ + ++++ G
Sbjct: 7 RPDVYTLTILINCF------CHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ DA+++F +M V Y P+ +Y +I+GLC G T A +L +M+ KG P+
Sbjct: 61 AKIIDAVKLFDEM-VKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVV 119
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y++++ +L + + E ++ L EM+ + + +TY ++L C GR+ EA L K++
Sbjct: 120 YSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179
Query: 388 NKNLI-DGYTYTKLLDVLEDD 407
+N++ D T+ L+D L +
Sbjct: 180 ERNVMPDTVTFNILVDGLSKE 200
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 19/254 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRA 192
D T++I+ L M E V M+ G E YN ++ + ++ A
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEK----GVEPNVNTYNALMDGYCSQSQMDEA 241
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F M C PS+RSYNIL G+ ++ + L +M + + P
Sbjct: 242 QKLFNIMVRKG---CAPSVRSYNILIKGHCKSGR--------IDEAKGLLAEMSHKALTP 290
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D + ++++KG+ DA ++ +M Y LP+ +Y ++ GLC QG A EL
Sbjct: 291 DTVTYSTLMKGFCQDGRPQDAQKLLEEM-RSYGLLPDLMTYSIVLDGLCKQGHLDEAFEL 349
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
M+ P+ Y L+ + G++E + + K D +TY ++ + +
Sbjct: 350 LKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLK 409
Query: 373 RGRAGEAMKLLKEL 386
G + EA +L +++
Sbjct: 410 GGLSNEACELFRDM 423
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 19/230 (8%)
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ F + N L +P+ +++ L S+ K ++ ++ LF +MV G EPD
Sbjct: 30 FAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAK-------IIDAVK-LFDEMVKMGYEPD 81
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + +++I G A+++ +M PN Y +I LC A E
Sbjct: 82 VITYSTIINGLCKMGSTTMAIQLLKKMEE-KGCKPNVVVYSTIIDSLCKDKLITEAMEFL 140
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
EM +G P+ +Y+S++ G E +M+E+ D +T+ ++D + +
Sbjct: 141 SEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKE 200
Query: 374 GRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVLEDDFGNSIR 413
G EA + + + K L+DGY +D + F +R
Sbjct: 201 GMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVR 250
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 15/283 (5%)
Query: 113 LQEDPL---VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
L E PL +ELF+W Q +RH Y ++ KLGA ++ +D ++ QM
Sbjct: 84 LLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQM-KDEGI 142
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
E+L+ +I+ + +A + + M+N + C P+ +SYN++ +S +
Sbjct: 143 VFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYS--CEPTFKSYNVVLEILVSGNCHKV 200
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+V F M++ I P +F+ ++K + N ++ AL + M + +PN
Sbjct: 201 AANV--------FYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM-TKHGCVPN 251
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
S Y LIH L R A +L +EM G VP ++++N ++ L + E K +
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
M+ + D ITY +++ +C+ GR A L + ++
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV 354
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 137/311 (44%), Gaps = 69/311 (22%)
Query: 156 MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
+ D+V P C YN++IY + + + A+ V M RN C+P++ SY
Sbjct: 376 LSDMVTSYGIVPDVC----TYNSLIYGYWKEGLVGLALEVLHDM---RNKGCKPNVYSYT 428
Query: 216 ILFTAFLSRGK----NTYINHVYMETIR-------CL----------------FKQMVND 248
IL F GK +N + + ++ CL F++M
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV-----YNYLPNSF--------- 291
G +PD+++ NS+I G + + AL + M GVV YN L N+F
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 292 -----------------SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+Y+ LI GLC G AR L ++M R G PS+ S N L++
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-ID 393
L +G VEE V+ EM+ + D +T+ ++++ +CR GR + + + ++LQ + + D
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 394 GYTYTKLLDVL 404
T+ L+ L
Sbjct: 669 TVTFNTLMSWL 679
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N++I E ++ A+++ + M + + + +YN L AFL RG+ +
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVA---NTVTYNTLINAFLRRGE--------I 545
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R L +MV G D + NS+IKG + V+ A +F +M + + P++ S +
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM-LRDGHAPSNISCNI 604
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC G + A E EM +G P ++NSL++ L G +E+ + ++ +
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
P D +T+ T++ +C+ G +A LL E
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 19/271 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA T++ + L E +VN+ML F + Y ++ + ++ A +
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIR-GFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND-GIEPDI 254
F + +P I +N L F++ G+ ++ + + MV GI PD+
Sbjct: 345 FYRIP-------KPEIVIFNTLIHGFVTHGR--------LDDAKAVLSDMVTSYGIVPDV 389
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ NS+I GY V AL + H M PN +SY L+ G C G+ A + +
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRN-KGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM G P++ +N L+SA + E V+ EM K D T+ +++ +C
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 375 RAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
A+ LL+++ ++ ++ + TY L++
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAF 539
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 142/300 (47%), Gaps = 33/300 (11%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTR---KLG----AAKMYQEM--DDVVNQMLATPSFCGT 172
ELF+ A + F+ D TY++ K+G A +++ EM + VV ++
Sbjct: 311 ELFD-AIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVT------- 362
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
YN++I +A ++S A + K M S P I + IL +
Sbjct: 363 ---YNSLIDCLCKAGEVSGAWEIVKTMHRS---GLTPDIVTCCILLDGLCKSKR------ 410
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
++ LF Q+V G+ PD++S +I G S + +A+ + M + N +P+ +
Sbjct: 411 --LDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHL-KNLVPHIVT 467
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC GR NA L +EM KG +P + +Y+ L+ AL ++E V +MI
Sbjct: 468 YSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMI 527
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLEDDFGNS 411
++ D + Y ++D C+ R EA+ L +E+ KNL+ D TYT L + + NS
Sbjct: 528 KRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNS 587
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
R +F +MVN G EP+I + +++ GY L +V+ A +F +G + + + ++Y+ IH
Sbjct: 275 REMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIG-EWGFKRDVWTYNVFIH 333
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR-- 356
G C GR ++A + DEM R+G VP+ +YNSL+ L GEV WE+++
Sbjct: 334 GYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA----WEIVKTMHRS 389
Query: 357 --PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D +T +LD +C+ R +A+ L +L L D ++YT L+
Sbjct: 390 GLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 437
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 33/239 (13%)
Query: 187 RKLSRAVYVFKYM-----KNSRNLECR------------PSIRSYNILFTAFLSRGKNTY 229
R L +VYVF + KN +E R P+I + L + +G
Sbjct: 249 RGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN--- 305
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNY 286
++ R LF + G + D+++ N I GY V DA+R+F +M GVV
Sbjct: 306 -----VDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVV--- 357
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
PN +Y+ LI LC G A E+ M R G P + L+ L + +++ +
Sbjct: 358 -PNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAIL 416
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+++E D +Y ++ C R GEAM LL+++ KNL+ TY+ L+D L
Sbjct: 417 LFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGL 475
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +M+ G++ ++ +I G + + +A +F +M V Y PN + L+ G
Sbjct: 242 LVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEM-VNRGYEPNIVTCTALMGGY 300
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G AREL D + GF +YN + G V + V+ EM + +
Sbjct: 301 CLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNI 360
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+TY +++D +C+ G A +++K + L D T LLD L
Sbjct: 361 VTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGL 405
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F +++ G D +LN+++KG ++ V AL FH V + N SY LI+GL
Sbjct: 94 IFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALE-FHDEIVNNGFSLNEVSYGILINGL 152
Query: 301 CAQGRTKNARELCDEMKR------KGFVPSSKS--YNSLVSALALNGEVEETVKNLWEMI 352
C GR A L +++ GF Y+ ++ L NG V+E + EM+
Sbjct: 153 CENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMM 212
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ TY +++ +C G+ E L+ E+ + L + Y +T L+D L
Sbjct: 213 GNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 7/154 (4%)
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF-------SYDYL 296
++VN+G + S +I G + VN+A+ + + + F Y +
Sbjct: 132 EIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIV 191
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I LC G E +EM G P+ +Y SL+ L G+ E + EMI +
Sbjct: 192 IDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGL 251
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
V + ++D +C+ G EA ++ E+ N+
Sbjct: 252 DVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRG 285
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN F+Y LI GLC G+ L DEM R+G S + L+ L NG + E +
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREM 277
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
EM+ + + +T ++ C +G A +L +
Sbjct: 278 FDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI 316
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
HV+ + IF ++ + Y ++ + + ++ GLC G A E DE+ GF + S
Sbjct: 86 GHVSFSFSIFGKI-LKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVS 144
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPV---------DFITYRTVLDEICRRGRAGE 378
Y L++ L NG V E V NL MIEK++ + + Y V+D +CR G E
Sbjct: 145 YGILINGLCENGRVNEAV-NLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDE 203
Query: 379 AMKLLKELQNKNLI-DGYTYTKLL 401
+ E+ + + +TY L+
Sbjct: 204 GFEFYNEMMGNGVCPNEFTYGSLI 227
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 126/260 (48%), Gaps = 21/260 (8%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF--FAEARKLSRAVYVFKYMKNSR 203
K G ++ Q + D + + PS L N I E +L A++
Sbjct: 148 KEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHA-------- 199
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
+P + +Y++L K M+ + +M+++G+ P+ + ++I G
Sbjct: 200 -TGVQPDVYTYSVLINGLCKESK--------MDEANEMLNEMLDNGLVPNGVTFTTLIDG 250
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ + V+ A+ I+ QM + +LP+ +Y+ LI+GLC +G AR+L +EM KG P
Sbjct: 251 HCKNGKVDLAMEIYKQM-LSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKP 309
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+Y +L+ G++E T + MI + +D +TY ++ +CR GRAG+A K+L
Sbjct: 310 DKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKML 369
Query: 384 KELQNKNL-IDGYTYTKLLD 402
+E+ L D TYT +++
Sbjct: 370 REMLTVGLKPDNGTYTMIMN 389
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 84/185 (45%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF-----HQMGVVYN---------------------- 285
D++ + ++ Y+ S V DA++ F H++ V ++
Sbjct: 65 DLYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFY 124
Query: 286 -------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y P+ + ++ L+H C +G + A+ + D + + PS S+N+L++
Sbjct: 125 KEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRL 184
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M D TY +++ +C+ + EA ++L E+ + L+ +G T+
Sbjct: 185 GDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTF 244
Query: 398 TKLLD 402
T L+D
Sbjct: 245 TTLID 249
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 26/256 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+I++ F +L+ A +FK M + P+ ++ IL G +
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGR---DVMPNTVTFTILVDGLCKEG--------MV 319
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
R +F+ M G+EPDI + N+++ GY L +N+A ++F M + P + SY+
Sbjct: 320 SEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIM-IRKGCAPGAHSYNI 378
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C R A+ L EM K P + +Y++L+ L G +E + EM
Sbjct: 379 LINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYG 438
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVLE 405
+ +TY +LD C+ G EA+KLLK ++ K LI+G L+V +
Sbjct: 439 PHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAK 498
Query: 406 D----DFGNSIRHHLR 417
+ FG+ R +R
Sbjct: 499 ELFSKLFGDGTRPDIR 514
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 98/176 (55%), Gaps = 4/176 (2%)
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+NHV + +M GI PD + N++I G + +A+ +F++M V + PN
Sbjct: 141 LNHVDFSV--SVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEM-VKRGHEPN 197
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
SY +I+GLC G T A ++ +M++ G P+ +Y++++ +L + V + ++ L
Sbjct: 198 VISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLS 257
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
EM+E+ P + TY +++ C G+ EA +L KE+ ++++ + T+T L+D L
Sbjct: 258 EMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 22/237 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I K+ AV +F M + P++ SY + G + V
Sbjct: 166 FNALINGLCNEGKIKEAVELFNEMVKRGH---EPNVISYTTVINGLCKTGNTSMAVDV-- 220
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
FK+M +G +P++ + +++I VNDA+ +M V PN F+Y+
Sbjct: 221 ------FKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEM-VERGIPPNVFTYNS 273
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++HG C G+ A L EM + +P++ ++ LV L G V E M EK
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLD 402
D TY ++D C + EA K+ + + K LI+GY ++ +D
Sbjct: 334 VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMD 390
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 92/193 (47%), Gaps = 12/193 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T++ + + A+ +FK M + P++ +Y IL F G ++
Sbjct: 411 YSTLMQGLCQLGRPKEALNLFKEMCSYGP---HPNLVTYVILLDGFCKHG--------HL 459
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L K M +EP+I +I+G ++ + A +F ++ P+ +Y
Sbjct: 460 DEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKL-FGDGTRPDIRTYTV 518
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GL +G + A +L +M+ GF+P+S SYN ++ N + ++ + EM+ K+
Sbjct: 519 MIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 578
Query: 356 RPVDFITYRTVLD 368
V+ T++ +LD
Sbjct: 579 FSVNLSTFQMLLD 591
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 137/283 (48%), Gaps = 15/283 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L++F+W + TY+ + + L ++ + +ML T YNT+I
Sbjct: 435 LKIFHWMEGHGSLA-NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLI 492
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ ++ A + MK + C P +YN L + F GK +E+
Sbjct: 493 NGYLTKGNVNNAARLLDLMKENG---CEPDEWTYNELVSGFSKWGK--------LESASF 541
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
F++MV G+ P+ S ++I G+ V+ AL + +M + PN SY+ +I+GL
Sbjct: 542 YFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM-GCNPNVESYNAVINGL 600
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ R A ++CD+M +G +P+ +Y +L+ L NG + K +M +++ +
Sbjct: 601 SKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 660
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
TY +++ +C+ G+A EA LLKE++ K L D T+T L+D
Sbjct: 661 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 703
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 193/450 (42%), Gaps = 87/450 (19%)
Query: 14 FSHRTFN--KHLCCTNSSHNSKTLSNYYLSQTQINPHLKLSSNAILCSCYSAIALSRSSS 71
FSH N K C + ++S L S PH+ S + A+ SR
Sbjct: 39 FSHEMVNHLKSPCLVHLQNHSSVLGFLNFSS---KPHI---------SSHFAVPASREPF 86
Query: 72 RGVGKRSKADSKPALDDTQFRCA--VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASK 129
+ + R A L Q++ + + +L P+ + ++ + +D ++ F W SK
Sbjct: 87 QAIVSRVCA----ILSRVQWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQFFYWISK 142
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDV----------------VNQMLATPSFCGTE 173
+P ++H+ + + M +L +++ D + V L S G
Sbjct: 143 RPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFG 202
Query: 174 -ALY--NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
+LY NT++ A+ + A ++K M NS +PS+ ++N L +GK
Sbjct: 203 FSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG---IQPSLLTFNTLINILSKKGK---- 255
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
+ + Q+ + PD+F+ S+I G+ + +++ A +F +M V PNS
Sbjct: 256 ----VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM-VKEGCDPNS 310
Query: 291 FSYDYLIHGLCAQGRTKNARELCDE----------------------------------- 315
+Y LI+GLC +GR A ++ +E
Sbjct: 311 VTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVAR 370
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
MK++G P+ ++Y +L+S L+ G++E + +M+++ + +TY +++E+C GR
Sbjct: 371 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 430
Query: 376 AGEAMKLLKELQ-NKNLIDGYTYTKLLDVL 404
A+K+ ++ + +L + TY +++ L
Sbjct: 431 FSTALKIFHWMEGHGSLANTQTYNEIIKGL 460
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 42/215 (19%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
CRP++++Y L + GK +E L+ +M+ +G+ P+ + N++I +
Sbjct: 376 CRPNVQTYTALISGLSRLGK--------LEVAIGLYHKMLKEGLVPNTVTYNALINELCV 427
Query: 267 SNHVNDALRIFHQM---GVVYNY-------------------------------LPNSFS 292
+ AL+IFH M G + N LP +
Sbjct: 428 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 487
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI+G +G NA L D MK G P +YN LVS + G++E EM+
Sbjct: 488 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
E + ++Y T++D + G+ A+ LL+ ++
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME 582
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 45/258 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++IY + K A + K M+ P ++ L F+ G+ I+H ++
Sbjct: 663 YSSLIYGLCQEGKADEAEILLKEMERKG---LAPDEVTFTSLIDGFVVLGR---IDHAFL 716
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKG-------------------YILSNHVNDALRI 276
L ++MV+ G +P+ + + ++KG Y S H D
Sbjct: 717 -----LLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDV--- 768
Query: 277 FHQMGVVYNYL---------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+V N L P +Y L+ GLC +GR A +L +MK +GF P +
Sbjct: 769 --NFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 826
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y SL+ A N EV+ +K + K + YR ++ +C+ G+ EA L +
Sbjct: 827 YYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNML 886
Query: 388 NKNL-IDGYTYTKLLDVL 404
K D +T L+D L
Sbjct: 887 EKEWNADEIVWTVLVDGL 904
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 12/220 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A+ + +Y F+ K V + + C P++ +Y+ L + +G+
Sbjct: 752 AVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGR------- 804
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ E + L K M G PD S++ + + V+ AL+IFH + L S Y
Sbjct: 805 FYEAEQ-LVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSI-Y 862
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI LC G+ + A+ L D M K + + LV L GE++ +K L M
Sbjct: 863 RALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMES 922
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKL---LKELQNKN 390
K + TY + E+ R G++ E+ L LK L++ N
Sbjct: 923 KNFTPNIQTYVILGRELSRIGKSIESEPLADKLKVLKDSN 962
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 19/267 (7%)
Query: 140 YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYM 199
Y+ + + K+ E D+ ++M+ + Y+ +I F KL A+ +F
Sbjct: 181 YNTIIDSMCKVKLVNEAFDLYSEMV-SEGISPDVVTYSALISGFFIVGKLKDAIDLF--- 236
Query: 200 KNSRNLE-CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
N LE +P + ++NIL F GK M+ + +F M+ GI+P++ +
Sbjct: 237 -NKMILENIKPDVYTFNILVDGFCKDGK--------MKEGKTVFAMMMKQGIKPNVVTYC 287
Query: 259 SMIKGYILSNHVNDALRIFHQM--GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
S++ GY L VN A IF+ M G V P++ SY+ +I+G C + A L +M
Sbjct: 288 SLMDGYCLVKQVNKANSIFNTMAQGGVN---PDTQSYNIMINGFCKIKKVDEAMNLFKKM 344
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
K +P+ +Y SL+ L +G++ +K + EM ++ P D ITY ++LD +C+ +
Sbjct: 345 HCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQV 404
Query: 377 GEAMKLLKELQNKNLIDGYTYTKLLDV 403
+A+ LL +L+++ D + LDV
Sbjct: 405 DKAIALLTKLKDQVFEDLFVKGYNLDV 431
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 18/186 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + +K+ A+ +FK M + +N+ P++ +Y L GK +Y
Sbjct: 321 YNIMINGFCKIKKVDEAMNLFKKM-HCKNI--IPNVVTYTSLIDGLCKSGKISYALK--- 374
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG-------VVYNYLP 288
L +M + G+ PDI + +S++ ++ V+ A+ + ++ V Y
Sbjct: 375 -----LVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNL 429
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ ++Y +I G C +G A L +M+ G +P +K+Y ++ +L E + K L
Sbjct: 430 DVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLL 489
Query: 349 WEMIEK 354
EMI +
Sbjct: 490 REMIAR 495
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 30/212 (14%)
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
++ + NIL F G+N V F ++ G +P++ +L ++IKG L
Sbjct: 94 NLVTLNILINCFSQLGQNPLSFSV--------FANILKKGYDPNVITLTTLIKGLCLKVS 145
Query: 270 VNDALRIFHQMGVVYNYL------------PNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
+ ++G L PN Y+ +I +C A +L EM
Sbjct: 146 YGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 205
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
+G P +Y++L+S + G++++ + +MI + D T+ ++D C+ G+
Sbjct: 206 SEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 265
Query: 378 EAMKLLKELQNK----------NLIDGYTYTK 399
E + + + +L+DGY K
Sbjct: 266 EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVK 297
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 137/274 (50%), Gaps = 22/274 (8%)
Query: 136 DASTYHIMT----RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D TY I+ R G + +D++ ++ TP YN ++ + +L
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRG-CTPDV----VTYNVLVNGICKEGRLDE 292
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ K++ + + C+P++ ++NI+ + S G+ +M+ + L M+ G
Sbjct: 293 AI---KFLNDMPSSGCQPNVITHNIILRSMCSTGR-------WMDAEK-LLADMLRKGFS 341
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + + N +I + A+ I +M + PNS SY+ L+HG C + + A E
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKM-PQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ M +G P +YN++++AL +G+VE+ V+ L ++ K ITY TV+D +
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ G+ G+A+KLL E++ K+L D TY+ L+ L
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 48/289 (16%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T++I+ R + + + + + ++ ML F + +N +I F L RA+ + +
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M C+P+ SYN L F K M+ ++MV+ G PDI + N
Sbjct: 370 MPQH---GCQPNSLSYNPLLHGFCKEKK--------MDRAIEYLERMVSRGCYPDIVTYN 418
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+M+ V DA+ I +Q+ P +Y+ +I GL G+T A +L DEM+
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSS-KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVK----------------------NLWEMIEKQR 356
K P + +Y+SLV L+ G+V+E +K L + + R
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 357 PVDFI-------------TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+DF+ +Y +++ + G A EA++LL EL NK L+
Sbjct: 538 AIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
FK+++N P I L F GK + + + G PD+
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI--------LEILEGSGAVPDVI 173
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N MI GY + +N+AL + +M V P+ +Y+ ++ LC G+ K A E+ D
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M ++ P +Y L+ A + V +K L EM ++ D +TY +++ IC+ GR
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 376 AGEAMKLLKEL 386
EA+K L ++
Sbjct: 290 LDEAIKFLNDM 300
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T+I F K +A + + ++ S + P + +YN++ + + G+ IN+
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAV---PDVITYNVMISGYCKAGE---INNAL--- 192
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ +M + PD+ + N++++ S + A+ + +M + + P+ +Y LI
Sbjct: 193 --SVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM-LQRDCYPDVITYTILI 246
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
C +A +L DEM+ +G P +YN LV+ + G ++E +K L +M
Sbjct: 247 EATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ IT+ +L +C GR +A KLL ++ K
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 112/241 (46%), Gaps = 19/241 (7%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
+LG + ++ +++ A P YN +I + +A +++ A+ V M S
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDV----ITYNVMISGYCKAGEINNALSVLDRMSVS--- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P + +YN + + GK ++ + +M+ PD+ + +I+
Sbjct: 202 ---PDVVTYNTILRSLCDSGK--------LKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V A+++ +M P+ +Y+ L++G+C +GR A + ++M G P+
Sbjct: 251 RDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
++N ++ ++ G + K L +M+ K +T+ +++ +CR+G G A+ +L++
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 386 L 386
+
Sbjct: 370 M 370
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+ ++ + + + + + M V + +P+ LI G C G+T+ A ++ + ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENM-VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILE 164
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
G VP +YN ++S GE+ + L M D +TY T+L +C G+
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLK 221
Query: 378 EAMKLL-KELQNKNLIDGYTYTKLLDVLEDDFG 409
+AM++L + LQ D TYT L++ D G
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 13/192 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ M L ++ +++NQ L++ YNT+I A+A K +A+ +
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQ-LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M R + +P +Y+ L GK + E F++M GI P+
Sbjct: 472 LDEM---RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-----FERM---GIRPNAV 520
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NS++ G S + A+ M + PN SY LI GL +G K A EL +E
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFM-INRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 316 MKRKGFVPSSKS 327
+ KG + S +
Sbjct: 580 LCNKGLMKKSSA 591
>gi|414868427|tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 674
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 134/309 (43%), Gaps = 15/309 (4%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+++F + +L PRF L + +PL+C+ L+ WAS RF + + R L
Sbjct: 63 NSEFAAPLRQLGPRFVVRALQHAAG---EPLLCVRLYVWAS---RFGQHFARDRSVRRAL 116
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
G A + + + ++A CG E + +L A Y + L
Sbjct: 117 GDALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGL 176
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
RPS YN + A + G ++ Y+ F+QM DG PD F+ N+++ G
Sbjct: 177 RPSTAIYNAVIAASVRAGA---VDAAYLR-----FQQMPADGCRPDCFTYNTLVHGVCRR 228
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V++ALR+ QM PN +Y L+ G C R + A + + MK KG + +
Sbjct: 229 GIVDEALRLVKQMERA-GIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEAT 287
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y SLV E E + L E IE + I Y T+L + + EA++L K++
Sbjct: 288 YRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMS 347
Query: 388 NKNLIDGYT 396
+ + G T
Sbjct: 348 KRGYLLGST 356
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 13/238 (5%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
+QM++ E+ YN +I FA+A ++ RA+ K M+ S P++ ++N L
Sbjct: 414 SQMVSDGLLSSVES-YNIVIDCFAKAGEVERALETIKVMQES---GFSPNLVTFNTLING 469
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
+L G + + K ++ G+ PD+ + S+I G ++ ++DA F +M
Sbjct: 470 YLKLGN--------VHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEM 521
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
+ PN +Y+ LIHGLC+ G A EL ++MK G P + S+N+ + + +
Sbjct: 522 SE-WGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRK 580
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYT 398
+E+ K +M D TY ++ +C R EA +++ +++ + I +T
Sbjct: 581 IEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHT 638
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 11/144 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I+ A +S+A+ + MK P S+N +F K +
Sbjct: 533 YNVLIHGLCSAGHVSKAIELLNKMKMD---GITPDAYSFNAPILSFCRMRK--------I 581
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + LF M G+ PD ++ N++IK V++A I M + +Y
Sbjct: 582 EKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWP 641
Query: 296 LIHGLCAQGRTKNARELCDEMKRK 319
++ L GR A +++ RK
Sbjct: 642 VVGALTKMGRFSEAGMFMNKLHRK 665
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 134/309 (43%), Gaps = 15/309 (4%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+++F + +L PRF L + +PL+C+ L+ WAS RF + + R L
Sbjct: 63 NSEFAAPLRQLGPRFVVRALQHAAG---EPLLCVRLYVWAS---RFGQHFARDRSVRRAL 116
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
G A + + + ++A CG E + +L A Y + L
Sbjct: 117 GDALLRRGPVVLSAALVADVRSCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGL 176
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
RPS YN + A + G ++ Y+ F+QM DG PD F+ N+++ G
Sbjct: 177 RPSTAIYNAVIAASVRAGA---VDAAYLR-----FQQMPADGCRPDCFTYNTLVHGVCRR 228
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V++ALR+ QM PN +Y L+ G C R + A + + MK KG + +
Sbjct: 229 GIVDEALRLVKQMERA-GIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEAT 287
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y SLV E E + L E IE + I Y T+L + + EA++L K++
Sbjct: 288 YRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMS 347
Query: 388 NKNLIDGYT 396
+ + G T
Sbjct: 348 KRGYLLGST 356
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 13/238 (5%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
+QM++ E+ YN +I FA+A ++ RA+ K M+ S P++ ++N L
Sbjct: 414 SQMVSDGLLSSVES-YNIVIDCFAKAGEVERALETIKVMQESGF---SPNLVTFNTLING 469
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
+L G + + K ++ G+ PD+ + S+I G ++ ++DA F +M
Sbjct: 470 YLKLGN--------VHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEM 521
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
+ PN +Y+ LIHGLC+ G A EL ++MK G P + S+N+ + + +
Sbjct: 522 SE-WGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRK 580
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYT 398
+E+ K +M D TY ++ +C R EA +++ +++ + I +T
Sbjct: 581 IEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHT 638
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 22/288 (7%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARK 188
R D TY I+ Y++ ++++M TP YN ++ + +
Sbjct: 62 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDI----VTYNVVVNGICQEGR 117
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ A+ +++KN + C P+ SYNI+ + + E L +M
Sbjct: 118 VDDAI---EFLKNLPSYGCEPNTVSYNIVLKGLCTAER--------WEDAEELMGEMGQK 166
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G P++ + N +I V AL + Q+ Y PNS SY+ L+H C Q +
Sbjct: 167 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQI-PKYGCTPNSLSYNPLLHAFCKQKKMDK 225
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A D M +G P SYN+L++AL +GEV+ V+ L ++ +K I+Y TV+D
Sbjct: 226 AMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 285
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFGNSIR 413
+ + G+ EA++LL E+ +K L D TY+ + L ED ++IR
Sbjct: 286 GLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 333
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N+M+ GY + ++ A R+ +M V P++++Y+ LI GLC +GRT NA + D
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMPVE----PDAYTYNTLIRGLCGRGRTANALAVLD 56
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM R+ VP +Y L+ A ++ +K L EM +K D +TY V++ IC+ G
Sbjct: 57 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 116
Query: 375 RAGEAMKLLKELQN 388
R +A++ LK L +
Sbjct: 117 RVDDAIEFLKNLPS 130
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 16/268 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
+Y+I+ + L A+ +++ ++++ +M C + +N +I F + A+ V +
Sbjct: 139 SYNIVLKGLCTAERWEDAEELMGEM--GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 196
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
+ C P+ SYN L AF + K M+ MV+ G PDI S
Sbjct: 197 QIPK---YGCTPNSLSYNPLLHAFCKQKK--------MDKAMAFLDLMVSRGCYPDIVSY 245
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+++ S V+ A+ + HQ+ P SY+ +I GL G+TK A EL +EM
Sbjct: 246 NTLLTALCRSGEVDVAVELLHQLKD-KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 304
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG P +Y+++ + L +E+ ++ ++ + + + Y ++ +C+R
Sbjct: 305 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 364
Query: 378 EAMKLLK-ELQNKNLIDGYTYTKLLDVL 404
A+ L + N + + TYT L++ L
Sbjct: 365 SAIDLFAYMIGNGCMPNESTYTILIEGL 392
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 60/238 (25%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YN +++ F + +K+ +A+ M SR C P I SYN L TA G+
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLDLMV-SRG--CYPDIVSYNTLLTALCRSGEVDVAVELLH 266
Query: 227 --------------NTYINHVYM-----ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
NT I+ + E + L +MV+ G++PDI + +++ G
Sbjct: 267 QLKDKGCAPVLISYNTVIDGLTKAGKTKEALE-LLNEMVSKGLQPDIITYSTIAAGLCRE 325
Query: 268 NHVNDALRIF---HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ + DA+R F MG+ PN+ Y+ +I GLC + T +A +L M G +P+
Sbjct: 326 DRIEDAIRAFGKVQDMGI----RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 381
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
+Y L+ LA G ++E R +LDE+C RAGE + L
Sbjct: 382 ESTYTILIEGLAYEGLIKEA-------------------RDLLDELCS--RAGEEILL 418
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN + + G+ ++ R L +M +EPD ++ N++I+G +
Sbjct: 2 AYNAMVAGYCGAGQ--------LDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTAN 50
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
AL + +M + +P+ +Y L+ C + K A +L DEM+ KG P +YN +V
Sbjct: 51 ALAVLDEM-LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVV 109
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+ + G V++ ++ L + + ++Y VL +C R +A +L+ E+ K
Sbjct: 110 NGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 167
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDEICRRGRAGEAMKLLK 384
+YN++V+ G+++ + + EM PV D TY T++ +C RGR A+ +L
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEM-----PVEPDAYTYNTLIRGLCGRGRTANALAVLD 56
Query: 385 E-LQNKNLIDGYTYTKLLD 402
E L+ + + D TYT LL+
Sbjct: 57 EMLRRRCVPDVVTYTILLE 75
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 149/316 (47%), Gaps = 22/316 (6%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASK-QPRFRHDASTYHIMTRKLGAAKMY 153
+ P R L ++ Q++ + L++F++A K P F H+ TYH + +L A+ +
Sbjct: 43 IKPWPQRLFPNRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAF 102
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
+ ++ ++ ++ + C +E L+ T+I + A SR K + R S+RS
Sbjct: 103 EPVESLLLELQDSGINC-SEDLFITVIRSYGLA---SRPKMALKTFLRIQTFGVRRSVRS 158
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND-GIEPDIFSLNSMIKGYILSNHVND 272
N L A + + ++ LFK + G+ P++F+ N +IK N V
Sbjct: 159 LNTLLNALVQNNR--------FSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEG 210
Query: 273 ALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
A ++F +M G+V PN +Y ++ G ++G A+ + E+ G++P + +Y
Sbjct: 211 ARKVFDEMPSMGIV----PNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYT 266
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
L+ G + VK + EM E + ITY ++ C+ ++GEA+ LL ++ K
Sbjct: 267 ILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEK 326
Query: 390 NLIDGYTY-TKLLDVL 404
I K++DVL
Sbjct: 327 KYIPNSALCCKVIDVL 342
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--GVVYNYLPNSFSYDYLIH 298
++++++ PD +++I ++ +A ++F++ G + + L +Y+ LI
Sbjct: 354 MWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLL----TYNTLIA 409
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G+C G A L D+M KG VP+ +YN L+ G+ +E +K + EM++K +
Sbjct: 410 GMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLL 469
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
+ TY +++ + + G+ E + +L + + +D
Sbjct: 470 NESTYLILVEGLLKLGKREELLNILSMIISSGAVD 504
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 153/324 (47%), Gaps = 29/324 (8%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+ + R + L PR ++C V+ LQ D V L F WA +Q R+RHD Y+ M L
Sbjct: 89 EGELRHLLRSLKPR----QVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEIL 144
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
K+ Q V+ +++A + ++ ++ A KL A+ M+ + +E
Sbjct: 145 SKTKLCQGAKRVL-RLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKA-GIEP 202
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYM-----ETIRCLFKQMVNDGIEPDIFSLNSMIK 262
SI NT I+ + M + +R L + + + I P++ + N +IK
Sbjct: 203 DLSI--------------CNTAIHVLVMGNRLDKAVRFLERMQIVE-IXPNVITYNCLIK 247
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM-KRKGF 321
GY + + DA + +M P+ SY ++ LC + R K R L ++M K
Sbjct: 248 GYCDLHRLEDAXELIAEMP-FKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNL 306
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P +YN+ V L+ +G +E ++ L E E++ VD + Y ++ CR GR +A +
Sbjct: 307 LPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKE 366
Query: 382 LLKELQNKNLI-DGYTYTKLLDVL 404
++ E+ +K I D TYT +++ L
Sbjct: 367 IVNEMFSKGCIPDVVTYTSVINGL 390
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 129/305 (42%), Gaps = 48/305 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +Y+ + L K +E+ ++ +ML + + YNT ++ + K
Sbjct: 273 DKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLS---KHGHGDEA 329
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
++++ + R Y+ + +F G+ M+ + + +M + G PD+
Sbjct: 330 LEFLREAEERRFRVDKVGYSAIVHSFCREGR--------MDKAKEIVNEMFSKGCIPDVV 381
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM-----------------GVVYN------------- 285
+ S+I G V+ A ++ QM G+ N
Sbjct: 382 TYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMS 441
Query: 286 ----YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
++PN+ +Y L+HG +G++ A +L EM +KGF P+ N L+ +L +V
Sbjct: 442 EEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 501
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE--LQNKNLIDGYTYTK 399
+E + + + + V+ + + TV+ C++ A+ LL + L NK+ D TYT
Sbjct: 502 DEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKH-PDVVTYTT 560
Query: 400 LLDVL 404
++D L
Sbjct: 561 IIDAL 565
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 138/339 (40%), Gaps = 64/339 (18%)
Query: 124 FNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFF 183
F +++ RFR D Y + + ++VN+M + Y ++I
Sbjct: 332 FLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDV-VTYTSVINGL 390
Query: 184 AEARKLSRAVYVFKYM--------------------KNSRNLECR------------PSI 211
+ RK+ +A + + M KN +LE R P+
Sbjct: 391 CQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNA 450
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLF---------------------------KQ 244
+Y++L F GK++ + E I+ F +Q
Sbjct: 451 ITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQ 510
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
+N+G ++ + ++I G+ + + AL + M + N P+ +Y +I L +G
Sbjct: 511 CLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDM-YLSNKHPDVVTYTTIIDALGKKG 569
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R + A +L +M R G++P+ +Y +++ G VE+ +K L +M+ +Q Y
Sbjct: 570 RIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQEC--RTAYN 627
Query: 365 TVLDEICRRGRAGEAMKLL-KELQNKNLIDGYTYTKLLD 402
V++++C G +A KLL K L+ + ID T L++
Sbjct: 628 QVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIE 666
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 151/343 (44%), Gaps = 44/343 (12%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYH-IMTRKLGAAKMYQEMDDVVNQMLA 165
LC V Q+ V ++ W F TY+ I+ A KM++ D ++ +M+A
Sbjct: 239 LCKVGKFQKAGDVVEDMKAWG-----FSPSVITYNTIIDGYCKAGKMFKA-DALLKEMVA 292
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
E +N +I F ++ A VF+ M+ +P++ +YN L S G
Sbjct: 293 K-RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ---GLQPNVVTYNSLINGLCSNG 348
Query: 226 K-----------------------NTYINHVYMETIRCLFKQMVND----GIEPDIFSLN 258
K N IN + + ++M++D G+ P++ + N
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I Y + ++DA + M + PN +Y+ LI G C +G K AR+L EM+
Sbjct: 409 TLIDAYGKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI---EKQRPVDFITYRTVLDEICRRGR 375
G +YN LV AL GE + V+ L EM +K R + +TY ++ C +G+
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGK 527
Query: 376 AGEAMKLLKELQNKNLIDGYTYTKLL--DVLEDDFGNSIRHHL 416
EA +LL E+ K LI T +L +++E F I HL
Sbjct: 528 LEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHL 570
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 48/290 (16%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
R + T+ ++ L +Q+ DVV M A F + YNTII + +A K+ +
Sbjct: 224 RIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAW-GFSPSVITYNTIIDGYCKAGKMFK 282
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A + K M R P+ ++NIL F R +N + + +F++M G++
Sbjct: 283 ADALLKEMVAKR---IHPNEITFNILIDGF-CRDEN-------VTAAKKVFEEMQRQGLQ 331
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++ + NS+I G + +++AL + +M + PN +Y+ LI+G C + K ARE
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGM-GLKPNVVTYNALINGFCKKKMLKEARE 390
Query: 312 LCDEMKRKGFVPSSKSYNSLVSA-----------------------------------LA 336
+ D++ ++G P+ ++N+L+ A
Sbjct: 391 MLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFC 450
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
G V+E K EM D +TY ++D +C++G +A++LL E+
Sbjct: 451 REGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 22/225 (9%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQE----MDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
+ + TY+ + KM +E +DD+ + LA P+ +NT+I + +A +
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLA-PNVI----TFNTLIDAYGKAGR 419
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ A + M ++ P++ +YN L F G ++ R L K+M +
Sbjct: 420 MDDAFLLRSMMLDT---GVCPNVSTYNCLIVGFCREGN--------VKEARKLAKEMEGN 468
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV--YNYLPNSFSYDYLIHGLCAQGRT 306
G++ D+ + N ++ A+R+ +M ++ N +Y+ LI G C +G+
Sbjct: 469 GLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKL 528
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+ A L +EM KG +P+ +Y+ L + G + + +L+ +
Sbjct: 529 EEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLYNV 573
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 124/305 (40%), Gaps = 60/305 (19%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q D ++C F W K+ H+ + + L AK Y ++ +++ + +
Sbjct: 86 QPDLILCY--FKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNST 143
Query: 174 ALYN-TIIYFFAEARKLSRAVYVFKYMKNSR------------NLECRPSIRSYNILFTA 220
++ +++ + A + + V+ Y+KN + R S S N + +
Sbjct: 144 IFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVS 203
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
+ G+ + VY E IR ++
Sbjct: 204 LVKEGRIGVVESVYKEMIR--------------------------------------RRI 225
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
GV N ++D +I+GLC G+ + A ++ ++MK GF PS +YN+++ G+
Sbjct: 226 GV------NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGK 279
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
+ + L EM+ K+ + IT+ ++D CR A K+ +E+Q + L + TY
Sbjct: 280 MFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNS 339
Query: 400 LLDVL 404
L++ L
Sbjct: 340 LINGL 344
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I + LS AV F M + +P++ SY L + + ++GK
Sbjct: 439 YNSLINGHCKLGNLSAAVSFFDEMIDK---GLKPTVVSYTSLISGYCNKGK-------LH 488
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R L+ +M GI P+ ++ ++I +N + DA R+F +M + N +PN +Y+
Sbjct: 489 EAFR-LYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEM-LEQNMMPNEVTYNV 546
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C +G T A EL ++M +KG VP + +Y L+S+L G V E K + ++ +
Sbjct: 547 MIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREH 606
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
++ + Y +L C+ GR +A+ + +E+ + + +D Y L+D
Sbjct: 607 FKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLID 654
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 10/197 (5%)
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
VF +KN + RP Y + + G ++ ++ M+++G P+I
Sbjct: 665 VFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGS--------VKKAFGIWDIMIDEGCTPNI 716
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ ++I + ++ A ++ +M +V N PN +Y + L +G + A +L +
Sbjct: 717 VTYTTLINELCKAGLMDKAELLWKEM-LVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHN 775
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M KG + ++ SYN LV G VEE K L EMI+ D ITY T++ + CRRG
Sbjct: 776 DM-LKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRG 834
Query: 375 RAGEAMKLLKELQNKNL 391
A++ + NK L
Sbjct: 835 NLDGAIEFWDTMLNKGL 851
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 13/254 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + L + ++ V+++M+ F TEA ++++ R+ + V F
Sbjct: 298 TYCTLVLGLCKVQEFEVGAGVMDEMIEL-GFVPTEAALSSLV---EGLRRKGKVVDAFDL 353
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+ + + PS+ YN L + GK + LFK+M G+ + + +
Sbjct: 354 VNRVKKVGAMPSLFVYNALINSLCKDGK--------FDEAELLFKEMGEKGLCANDVTYS 405
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+I + ++ A+ +M ++ + Y+ LI+G C G A DEM
Sbjct: 406 ILIDSFCRRGKLDTAIHFLGKM-IMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMID 464
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG P+ SY SL+S G++ E + EM K + T+ T++ + R R +
Sbjct: 465 KGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTD 524
Query: 379 AMKLLKELQNKNLI 392
A +L E+ +N++
Sbjct: 525 AFRLFDEMLEQNMM 538
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 131/339 (38%), Gaps = 75/339 (22%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL----- 175
L FN+ F H ++ I+ L A ++ ++ +L E
Sbjct: 89 LRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLD 148
Query: 176 ------------YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
++ +I + + +++ +V +F+ M R E P +R+ +
Sbjct: 149 CFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLM---RQCELMPQVRTLGEVLNGL-- 203
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
I V M + LF ++++ GI PDI+ ++I+ + + A + +M
Sbjct: 204 ----AKIRRVDM--VLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM--- 254
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARE-----------------------LC------- 313
+ N Y+ LIHGLC R A E LC
Sbjct: 255 ESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEV 314
Query: 314 -----DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV----DFITYR 364
DEM GFVP+ + +SLV L G+V + ++++ + + V Y
Sbjct: 315 GAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDA----FDLVNRVKKVGAMPSLFVYN 370
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+++ +C+ G+ EA L KE+ K L + TY+ L+D
Sbjct: 371 ALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILID 409
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 13/210 (6%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+ +Y ++I +++A + +A ++ M + C P+I +Y L G
Sbjct: 681 KVIYTSMIDGYSKAGSVKKAFGIWDIMIDE---GCTPNIVTYTTLINELCKAG------- 730
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
M+ L+K+M+ P+ + + + A+++ + M + L N+ S
Sbjct: 731 -LMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDM--LKGLLANTVS 787
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ L+ G C GR + A +L DEM P +Y++++ G ++ ++ M+
Sbjct: 788 YNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTML 847
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
K D + Y ++ C G G+A +L
Sbjct: 848 NKGLKPDTLAYNFLIYGCCIAGELGKAFEL 877
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 54/268 (20%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+I A +++ A +F M + P+ +YN++ G
Sbjct: 509 FTTLISALFRANRMTDAFRLFDEMLEQNMM---PNEVTYNVMIEGHCKEGN--------- 556
Query: 236 ETIRC--LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
T++ L QMV G+ PD ++ +I + V +A + + + L N Y
Sbjct: 557 -TVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKL-NEMCY 614
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKG--------------------------------- 320
L+HG C +GR ++A +C EM ++G
Sbjct: 615 SALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHD 674
Query: 321 --FVPSSKSYNSLVSALALNGEVEETVKNLWE-MIEKQRPVDFITYRTVLDEICRRGRAG 377
P Y S++ + G V++ +W+ MI++ + +TY T+++E+C+ G
Sbjct: 675 QRLRPDKVIYTSMIDGYSKAGSVKKAF-GIWDIMIDEGCTPNIVTYTTLINELCKAGLMD 733
Query: 378 EAMKLLKELQNKNLIDGY-TYTKLLDVL 404
+A L KE+ N + TY LD L
Sbjct: 734 KAELLWKEMLVSNSTPNHVTYCCFLDHL 761
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
SYNIL F G+ +E L +M+++ I PD + +++I +++
Sbjct: 787 SYNILVRGFCKLGR--------VEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDG 838
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
A+ + M + P++ +Y++LI+G C G A EL D+M R+G P+ ++ SL
Sbjct: 839 AIEFWDTM-LNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSL 896
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 3/160 (1%)
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
++MV G++ D+ +I G I + + M P+ Y +I G
Sbjct: 635 REMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHD-QRLRPDKVIYTSMIDGYSK 693
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFI 361
G K A + D M +G P+ +Y +L++ L G +++ + LW EM+ + +
Sbjct: 694 AGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKA-ELLWKEMLVSNSTPNHV 752
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
TY LD + R G +A++L ++ L + +Y L+
Sbjct: 753 TYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILV 792
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 22/267 (8%)
Query: 140 YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYM 199
Y+ + + K+ E D+ ++M++ Y+ +I F KL A+ +F
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSK-GISPDVVTYSALISGFCILGKLKDAIDLF--- 283
Query: 200 KNSRNLE-CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
N LE +P + ++NIL AF GK M+ + +F M+ GI+P+ + N
Sbjct: 284 -NKMILENIKPDVYTFNILVNAFCKDGK--------MKEGKTVFDMMMKQGIKPNFVTYN 334
Query: 259 SMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S++ GY L VN A IF+ M GV P+ SY +I+G C + A L E
Sbjct: 335 SLMDGYCLVKEVNKAKSIFNTMAQGGVN----PDIQSYSIMINGFCKIKKFDEAMNLFKE 390
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M RK +P +Y+SL+ L+ +G + ++ + +M ++ P + TY ++LD +C+ +
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQ 450
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLL 401
+A+ LL + ++K D TY+ L+
Sbjct: 451 VDKAIALLTKFKDKGFQPDISTYSILI 477
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 27/284 (9%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTR---KLGAAKMYQEMDDVVNQMLATPSFCGTEALYN 177
++LFN + + D T++I+ K G K + + D++ + P+F YN
Sbjct: 280 IDLFNKMILE-NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNF----VTYN 334
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
+++ + +++++A +F M P I+SY+I+ F K +
Sbjct: 335 SLMDGYCLVKEVNKAKSIFNTMAQGG---VNPDIQSYSIMINGFCKIKK--------FDE 383
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYD 294
LFK+M I PD+ + +S+I G S ++ AL++ QM GV PN +Y+
Sbjct: 384 AMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP----PNICTYN 439
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ LC + A L + K KGF P +Y+ L+ L +G++E+ K +++ K
Sbjct: 440 SILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVK 499
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
+D Y ++ C G EA+ LL ++++ I D TY
Sbjct: 500 GYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 10/201 (4%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ + NIL F G + V+ + ++ G PD + ++ KG L
Sbjct: 117 KPNLVNCNILINCFCQLGLIPFAFSVFAKILKM--------GYVPDTITFTTLSKGLCLK 168
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ A +FH V + + SY LIHGLC G T+ A +L + P+
Sbjct: 169 GQIQQAF-LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN+++ ++ V E EM+ K D +TY ++ C G+ +A+ L ++
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Query: 388 NKNL-IDGYTYTKLLDVLEDD 407
+N+ D YT+ L++ D
Sbjct: 288 LENIKPDVYTFNILVNAFCKD 308
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 108/238 (45%), Gaps = 14/238 (5%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
+FN + Q D +Y IM K + E ++ +M + Y+++I
Sbjct: 352 IFNTMA-QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM-HRKNIIPDVVTYSSLIDG 409
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
+++ ++S A+ + M + P+I +YN + A + ++ L
Sbjct: 410 LSKSGRISYALQLVDQMHDRG---VPPNICTYNSILDALCKTHQ--------VDKAIALL 458
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
+ + G +PDI + + +IKG S + DA ++F + +V Y + ++Y +I G C
Sbjct: 459 TKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDL-LVKGYNLDVYAYTIMIQGFCV 517
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+G A L +M+ G +P +K+Y ++ +L E + K L EMI + P++F
Sbjct: 518 EGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNF 575
>gi|297823431|ref|XP_002879598.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
lyrata]
gi|297325437|gb|EFH55857.1| hypothetical protein ARALYDRAFT_902735 [Arabidopsis lyrata subsp.
lyrata]
Length = 497
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 144/315 (45%), Gaps = 39/315 (12%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT--------EA 174
+FNWA+ FRHD ++ M+R L A + ++ +++ + A P C + E
Sbjct: 99 VFNWAATLDTFRHDHDSFLWMSRSLAATHRFHDLYRLLSFVAANPCPCSSGIFSCPELEP 158
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------- 226
++ + I + A K+ A+ F MK R ++ +P++ YN + ++ G
Sbjct: 159 IFRSAIDAYCRAGKMDYALLAFDTMK--RLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 227 -------------------NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
N Y + LF++M G EP++ S N++I+G++
Sbjct: 217 QRMGKERAKPDVCTFNTLINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSR 276
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ + +++ ++M + + + + L+ GLC +GR +A L ++ +PS
Sbjct: 277 GKIEEGIKMAYEMIEIGCRFSEA-TCEILVDGLCREGRVDDACGLVIDLSNSRVLPSGFD 335
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y SLV L + + ++ + E+ +K + FI T+++ + + GR +A ++E+
Sbjct: 336 YGSLVEKLCGENKADRAMEMVEELWKKGKTPCFIACTTLVEGLRKSGRTEKASGFMEEMM 395
Query: 388 NKNLI-DGYTYTKLL 401
N ++ D T+ LL
Sbjct: 396 NAGILPDSVTFNLLL 410
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME + L+K+ G P + ++++G S A +M + LP+S +++
Sbjct: 353 MEMVEELWKK----GKTPCFIACTTLVEGLRKSGRTEKASGFMEEM-MNAGILPDSVTFN 407
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ LC+ R+ +A L KG+ P +Y+ LVS G +E + EM++K
Sbjct: 408 LLLRDLCSSDRSTDANSLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDK 467
Query: 355 QRPVDFITYRTVLDEICRRGR 375
D TY ++D + G+
Sbjct: 468 DMLPDIFTYNRLMDGLSCSGK 488
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N I +S A+++ K M+ ++ P I+ L GK E
Sbjct: 398 NCIFGCLCRRHDISGALHLLKKMRIHGHV---PWIKHSTSLVKELCKHGK---------E 445
Query: 237 TIRCLF-KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
C F M +G +PDI + ++ + G I V+ AL++F + Y P+ +Y+
Sbjct: 446 VEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDI-CAQGYCPDVIAYNI 504
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC R A+ L EM+ KG VPS+ +YN+L+ L +EE + L MIEK+
Sbjct: 505 LIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKE 564
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
R + ITY T+++ +C GR +A+ L E+ K
Sbjct: 565 REPNVITYSTLINGLCNAGRPDDALVLWNEMGRKG 599
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 9/182 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + +YNIL + + + L +M G+ P + N++I G ++
Sbjct: 497 PDVIAYNILIKGLCKTQR--------IAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTD 548
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
H+ +A+ +F M + PN +Y LI+GLC GR +A L +EM RKG PSS +Y
Sbjct: 549 HLEEAM-LFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAY 607
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ + L+ G E + L EM E++ D Y +L+ A ++L+E+ +
Sbjct: 608 MAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVD 667
Query: 389 KN 390
K
Sbjct: 668 KG 669
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 15/231 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
++ +I + L AV +F+ M + C+P + YN L + + +
Sbjct: 327 FSIVINGLIKTGDLDLAVGLFRDMAR---IGCKPDLLLYNNLIDGLCTSNR--------L 375
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH-VNDALRIFHQMGVVYNYLPNSFSYD 294
+ L ++M GIEP F+ N+ I G + H ++ AL + +M + + ++P
Sbjct: 376 QESCGLLQEMEESGIEPTSFT-NNCIFGCLCRRHDISGALHLLKKMRI-HGHVPWIKHST 433
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ LC G+ A + +M +GF P +Y++ + L EV++ +K ++ +
Sbjct: 434 SLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQ 493
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
D I Y ++ +C+ R EA LL E++ K L+ TY L+D L
Sbjct: 494 GYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGL 544
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLI 297
LF+ + G PD+ + N +IKG + + +A + H+M G+V P++ +Y+ LI
Sbjct: 486 LFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLV----PSAVTYNTLI 541
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEKQR 356
GLC + A M K P+ +Y++L++ L G ++ + LW EM K
Sbjct: 542 DGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALV-LWNEMGRKGC 600
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
I Y + + GR EA+ L+E++ + + D Y Y LL+
Sbjct: 601 TPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLN 647
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 34/232 (14%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+LY+ II + + +A+ ++ MK + +P ++ L ++F
Sbjct: 206 SLYDVIIGGLCVNKDVKKALCLYSEMKG---FKIQPDVKIVTKLISSFSKE--------- 253
Query: 234 YMETIRCLFKQMVNDGIEPDIFSL--NSMIKGYILSNHVNDALRIFH-----------QM 280
E + C F++M D ++P +L NS++ + + V+ A + ++
Sbjct: 254 --EELTCFFEEMHED-MDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEI 310
Query: 281 GVVYN----YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
G ++ PNS ++ +I+GL G A L +M R G P YN+L+ L
Sbjct: 311 GKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLC 370
Query: 337 LNGEVEETVKNLWEMIEKQ-RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ ++E+ L EM E P F T + +CRR A+ LLK+++
Sbjct: 371 TSNRLQESCGLLQEMEESGIEPTSF-TNNCIFGCLCRRHDISGALHLLKKMR 421
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 5/143 (3%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
S+I G++ + V+ AL +F +M + P+ YD +I GLC K A L EMK
Sbjct: 175 SLIYGFVKESRVDKALHLFDKMKK-SGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKG 233
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP-VDFITYRTVLDEICRRGRAG 377
P K L+S+ + + EE EM E P + Y +VL+ + G
Sbjct: 234 FKIQPDVKIVTKLISSFS---KEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVH 290
Query: 378 EAMKLLKELQNKNLIDGYTYTKL 400
+A LL+ + N I KL
Sbjct: 291 KAYHLLQAITIGNCIGDGEIGKL 313
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
N ++ LI+G + R A L D+MK+ GF P Y+ ++ L +N +V++ +
Sbjct: 169 NKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKAL 225
>gi|255543026|ref|XP_002512576.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548537|gb|EEF50028.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 739
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 166/407 (40%), Gaps = 72/407 (17%)
Query: 48 HLKLSSNAILCSCYSAIALSRSSSRGVGKRSKADS---------KPALDD-----TQFRC 93
H S N L + S + LS+ SR V S S P +D T F
Sbjct: 3 HFSASKNTALTAMLSPLTLSKRISRWVNLNSALFSVSCTSSIQINPEIDQSILNTTDFDA 62
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L + + L V+ D +++F WAS Q RF H + TY + KLG A
Sbjct: 63 KIHILRNKLYPDSLIKVLQSTSDINSAVKIFKWASLQKRFNHTSDTYFWIILKLGLAGNL 122
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC----RP 209
+EM+ Q G E ++I F +L+ A+ + + C +P
Sbjct: 123 KEMEGFC-QNWVKDGCSGVEHAVFSLIASFVRHHRLNEAICILVNL-------CLGGYKP 174
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM--------- 260
SI +N++ A + K + + ++K+MV G+ P I +LN +
Sbjct: 175 SINVFNMILGALVEDKKG-------FKEVVFVYKEMVKAGVAPTIDTLNHLMEVLFDTGR 227
Query: 261 --------------------------IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
IKG I++N V++++ I H+M + LP Y
Sbjct: 228 VDSALDQYRRMNKKGCSRNSRTFQIVIKGLIVNNQVDESIAILHEM-LNIGCLPELSFYT 286
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I LC + +++ A L M+ FVP+S Y +L+ N ++++ V L EM+E
Sbjct: 287 CIIPELCREHKSEEAIRLFRMMRASKFVPNSVIYGALIQCFCKNLQLDDAVNLLEEMVES 346
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
D V+ CR G+ EA K L+++ N+++ Y LL
Sbjct: 347 CLTPDNDVVIDVVIAFCRLGKTNEAAKFLEDI---NVLETSPYNTLL 390
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 111/277 (40%), Gaps = 43/277 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE-ALYNTIIYFFAEARKLSRAVY 194
++ T+ I+ + L E ++++ML C E + Y II K A+
Sbjct: 246 NSRTFQIVIKGLIVNNQVDESIAILHEMLNIG--CLPELSFYTCIIPELCREHKSEEAIR 303
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+F+ M+ S+ + P+ Y L F KN ++ L ++MV + PD
Sbjct: 304 LFRMMRASKFV---PNSVIYGALIQCFC---KNLQLDDAVN-----LLEEMVESCLTPDN 352
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVV----YNYL----------------------- 287
+ ++ + N+A + + V+ YN L
Sbjct: 353 DVVIDVVIAFCRLGKTNEAAKFLEDINVLETSPYNTLLGACCDAGKFIEAKGLLEKMSER 412
Query: 288 --PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+ S++ LI LC + + A EL M VP+ +Y++LV + E+ +
Sbjct: 413 SLADCDSWNILIRCLCEKAAIRKASELLGRMIISSLVPNRATYSALVLGHCRLNKCEDAL 472
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
+ ++ K +D+++Y +++ +C G+ EA ++
Sbjct: 473 QLFLQLCTKCWILDYVSYSELIEGLCEAGKHLEATEV 509
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 21/231 (9%)
Query: 155 EMDDVVNQMLATPSFCGT---EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
++DD VN + C T + + + +I F +L + K++++ LE P
Sbjct: 332 QLDDAVNLLEEMVESCLTPDNDVVIDVVIAFC----RLGKTNEAAKFLEDINVLETSP-- 385
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
YN L A GK ++E + L ++M + D S N +I+ +
Sbjct: 386 --YNTLLGACCDAGK-------FIEA-KGLLEKMSERSL-ADCDSWNILIRCLCEKAAIR 434
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
A + +M ++ + +PN +Y L+ G C + ++A +L ++ K ++ SY+ L
Sbjct: 435 KASELLGRM-IISSLVPNRATYSALVLGHCRLNKCEDALQLFLQLCTKCWILDYVSYSEL 493
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
+ L G+ E + M ++++ ++ IC +G +A+KL
Sbjct: 494 IEGLCEAGKHLEATEVFHYMFMNGCLPQYLSFSKLIKGICEKGMVDKAVKL 544
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
+ QM C A YN+I+ +++ K R V VF + C +Y IL
Sbjct: 544 LQQMAHDFGMCCANATYNSIMLGLSKSDK-GRNVLVFLSQMLVKG--CNVDAEAYCILIK 600
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
+ +++ + + F MVN+G++PD +L+ ++ +++ + R++
Sbjct: 601 SMIAQDQE--------KDSALFFNAMVNEGLKPDSDTLHKLL------SYLANRSRLYLI 646
Query: 280 MGVVYNYLPNS-----FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+ + + NS Y+ L++G + R L D M KG+VP + ++ L+ +
Sbjct: 647 LATIDKLILNSEVLDSGMYNILVYGFWKERLKNEGRRLLDFMLEKGWVPDAATHRLLMGS 706
Query: 335 L 335
+
Sbjct: 707 V 707
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 2/167 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF Q+ D S + +I+G + +A +FH M + LP S+ LI G+
Sbjct: 474 LFLQLCTKCWILDYVSYSELIEGLCEAGKHLEATEVFHYM-FMNGCLPQYLSFSKLIKGI 532
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A +L G ++ +YNS++ L+ + + + L +M+ K VD
Sbjct: 533 CEKGMVDKAVKLQQMAHDFGMCCANATYNSIMLGLSKSDKGRNVLVFLSQMLVKGCNVDA 592
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
Y ++ + + + ++ + N+ L D T KLL L +
Sbjct: 593 EAYCILIKSMIAQDQEKDSALFFNAMVNEGLKPDSDTLHKLLSYLAN 639
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 139/275 (50%), Gaps = 17/275 (6%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-TEALYNTIIYFFAEARKLSR 191
FRH T+ +M +L +A ++ ++++ +M C TE ++ +I + K
Sbjct: 46 FRHSHQTFSLMISRLVSANHFRLAEELLCRM--KEEKCNITEDIFLSICRAYGRVHKPLD 103
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
AV VF+ MK EC PS +SY +F + G+N ++ ++ M GI
Sbjct: 104 AVRVFRKMKE---YECEPSQKSYITVFAILV--GENQ------LKLALRFYRYMREMGIP 152
Query: 252 PDIFSLNSMIKGYILSNHVNDA-LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P + SLN +IK ++ DA LRIF +M P+S++Y LI GLC G+ A+
Sbjct: 153 PSVASLNVLIKALCKNSGTMDAALRIFREMPN-RGCPPHSYTYGTLIXGLCRLGKIGEAK 211
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
EL EM+ K P+ +Y SL+ L + +++ ++ L EM K + TY +++D
Sbjct: 212 ELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGH 271
Query: 371 CRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
C+ G + A++LL + ++L + TY+ L+ L
Sbjct: 272 CKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGL 306
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I K+ A +FK M+ C P++ +Y L L + K+ +
Sbjct: 194 YGTLIXGLCRLGKIGEAKELFKEMETK---ACSPTVVTYXSLIHG-LCQSKD-------L 242
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++ L ++M + GI+P++F+ +S++ G+ S + AL + M V +LPN +Y
Sbjct: 243 DSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMM-VSRRHLPNMITYST 301
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
L+HGLC +G+ + A E+ D MK +G P + Y ++S + E L EM+
Sbjct: 302 LVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMV 358
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ A+ +F+ M N C P +Y L GK + + LFK+M
Sbjct: 172 MDAALRIFREMPNR---GCPPHSYTYGTLIXGLCRLGK--------IGEAKELFKEMETK 220
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
P + + S+I G S ++ A+R+ +M PN F+Y L+ G C G +
Sbjct: 221 ACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMAS-KGIKPNVFTYSSLMDGHCKSGCSSR 279
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM-IEKQRPVDFITYRTVL 367
A EL D M + +P+ +Y++LV L G+++E V+ L M ++ RP D Y ++
Sbjct: 280 ALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRP-DAGLYGKII 338
Query: 368 DEICRRGRAGEAMKLLKEL 386
C + EA L E+
Sbjct: 339 SGFCDICKFHEAANFLDEM 357
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
SRA+ + M + R+L P++ +Y+ L GK E + + +M G
Sbjct: 278 SRALELLDMMVSRRHL---PNMITYSTLVHGLCKEGK-------LQEAVE-ILDRMKLQG 326
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY-------DYLIHGLCA 302
+ PD +I G+ ++A +M V+ PN ++ + ++ GLC
Sbjct: 327 LRPDAGLYGKIISGFCDICKFHEAANFLDEM-VLGGISPNRLTWSLHVRIHNIVVQGLCT 385
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ A +L M+ +G +K+++SLV+ G++ + + EM+ D T
Sbjct: 386 E-HPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXT 444
Query: 363 YRTVLDEICRRGRAGEAMKLLK 384
+ V+ R + E+ +L++
Sbjct: 445 WNAVVCAFWDRRKVRESAELVQ 466
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 128/259 (49%), Gaps = 40/259 (15%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
Y+++I F KL AV +F M S N+ P++ +++IL F GK
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMI-SDNIN--PNVYTFSILIDGFCKEGKVREAKNVLA 292
Query: 227 -----NTYINHVYMETIR---CLFKQ----------MVNDGIEPDIFSLNSMIKGYILSN 268
N ++ V ++ CL KQ M G+ PD++S + MI G+
Sbjct: 293 VMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIK 352
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V++A+++F +M PN +Y+ L+ GLC GRT A EL DEM +G + +Y
Sbjct: 353 MVDEAMKLFEEMHC-KQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITY 411
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
NS++ A+ N V++ + L ++ EK D TY +++ +C+ GR +A K+ ++L
Sbjct: 412 NSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDL-- 469
Query: 389 KNLIDG-----YTYTKLLD 402
L+ G YTYT L++
Sbjct: 470 --LVKGYSPNIYTYTSLIN 486
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + N+L F G +++ +F +++ G PD + +IKG L
Sbjct: 90 KPDFITCNLLMNCFSQLG--------HIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLK 141
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ AL FH V + + SY LI+GLC G TK A +L + K P+
Sbjct: 142 GEVHKALY-FHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVM 200
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y++++ ++ + V + EM+ K+ D +TY +++ C G+ A+ L +
Sbjct: 201 YSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMI 260
Query: 388 NKNL-IDGYTYTKLLD 402
+ N+ + YT++ L+D
Sbjct: 261 SDNINPNVYTFSILID 276
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 111/223 (49%), Gaps = 24/223 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR---PSIRSYNILFTAFLSRGKNTYINH 232
Y+ +I F + + + A+ +F+ M C+ P++ +YN L G+ +
Sbjct: 341 YSIMINGFCKIKMVDEAMKLFEEM------HCKQIFPNVVTYNSLVDGLCKSGRTS---- 390
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPN 289
+E L +M + G +I + NS++ +NHV+ A+ + ++ G+ P+
Sbjct: 391 CALE----LVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGI----QPD 442
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
F+Y LI+GLC GR +A+++ +++ KG+ P+ +Y SL++ G +E + L
Sbjct: 443 IFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLS 502
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+M + + ITY ++ + + +A KLL+E+ + L+
Sbjct: 503 KMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 2/167 (1%)
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+T L +QM +GI+PD + N ++ + H+ + +F ++ + Y P++ ++
Sbjct: 75 QTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKI-LKKGYHPDAVTFTI 133
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC +G A D++ +GF SY +L++ L GE + V+ L + K
Sbjct: 134 LIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKL 193
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ + Y T++D +C+ +A L E+ +K + D TY+ L+
Sbjct: 194 VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLI 240
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ P++ +++I VNDA ++ +M V P+ +Y LI G C G+ K A
Sbjct: 194 VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEM-VSKRISPDVVTYSSLISGFCVVGKLKYA 252
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+L + M P+ +++ L+ G+V E L M++K +D +TY +++D
Sbjct: 253 VDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDG 312
Query: 370 ICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLD 402
C + +A L + + +I+G+ K++D
Sbjct: 313 YCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 15/315 (4%)
Query: 89 TQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLG 148
T+ + ++ L P+F++ + NV+ + L F W + F+HD T+ + LG
Sbjct: 106 TRLQNSIRSLVPQFDHNLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHFKIIEILG 165
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A ++ M E L+ +I + +A + AV +F+ MK L
Sbjct: 166 RASKLNHARCILLDM-PNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKE---LGVE 221
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
S++SY+ LF + RG+ YM R F M+N+GIEP + N M+ G+ LS
Sbjct: 222 RSVKSYDALFKEIMRRGR-------YMMAKR-YFNAMLNEGIEPIRHTYNVMLWGFFLSL 273
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A R + M P+ +Y+ +I+G C + A + EMK K P+ SY
Sbjct: 274 RLETAKRFYEDMKS-RGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISY 332
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+++ ++ ++ EM + ITY T+L +C + EA K+L E+
Sbjct: 333 TTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVT 392
Query: 389 KNLI--DGYTYTKLL 401
++ D + +LL
Sbjct: 393 RHFAPKDNSIFMRLL 407
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
NH F+Q++ GI+ ++ + N++I+G+ + + A + MG ++
Sbjct: 490 NHGQTGKADTFFRQLLKKGIQDEV-AFNNLIRGHAKEGNPDLAFEMLKIMGR-RGVSRDA 547
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
SY LI ++G +A+ D M G P S + S++ +L +G V+ + +
Sbjct: 548 ESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNS 607
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
M++K + +L+ + RG EA+ + L N N
Sbjct: 608 MLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCN 647
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ + +++ LI G +G A E+ M R+G ++SY L+ + GE +
Sbjct: 509 IQDEVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKT 568
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT-YTKLLDVL 404
L MIE D +R+V++ + GR A +++ + +K + + K+L+ L
Sbjct: 569 ALDSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEAL 627
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 23/264 (8%)
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL 189
Q +AS Y+++ + L + D Q+L E +N +I A+
Sbjct: 471 QSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKG--IQDEVAFNNLIRGHAKEGNP 528
Query: 190 SRAVYVFKYMKN---SRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
A + K M SR+ E SY +L ++LS+G+ + M+
Sbjct: 529 DLAFEMLKIMGRRGVSRDAE------SYKLLIKSYLSKGEPA--------DAKTALDSMI 574
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
+G PD S+++ V A R+ + M + N ++ L +G
Sbjct: 575 ENGHSPDSALFRSVMESLFADGRVQTASRVMNSM-LDKGITENLDLVAKILEALFMRGHD 633
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
+ A + + P +NSL+S L G+ K L +E++ ++F +Y V
Sbjct: 634 EEALGRINLLMNCNCPPD---FNSLLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKV 690
Query: 367 LDEICRRGRAGEAMKLLKELQNKN 390
LD + G+ A +L ++ K
Sbjct: 691 LDALLGAGKTLNAYAILCKIMEKG 714
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 15/315 (4%)
Query: 89 TQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLG 148
T+ + ++ L P+F++ + NV+ + L F W + F+HD T+ + LG
Sbjct: 106 TRLQNSIRSLVPQFDHNLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHFKIIEILG 165
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A ++ M E L+ +I + +A + AV +F+ MK L
Sbjct: 166 RASKLNHARCILLDM-PNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQKMKE---LGVE 221
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
S++SY+ LF + RG+ YM R F M+N+GIEP + N M+ G+ LS
Sbjct: 222 RSVKSYDALFKEIMRRGR-------YMMAKR-YFNAMLNEGIEPIRHTYNVMLWGFFLSL 273
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A R + M P+ +Y+ +I+G C + A + EMK K P+ SY
Sbjct: 274 RLETAKRFYEDMKS-RGISPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISY 332
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+++ ++ ++ EM + ITY T+L +C + EA K+L E+
Sbjct: 333 TTMIKGYVSVSRADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVT 392
Query: 389 KNLI--DGYTYTKLL 401
++ D + +LL
Sbjct: 393 RHFAPKDNSIFMRLL 407
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
NH F+Q++ GI+ ++ + N++I+G+ + + A + MG ++
Sbjct: 490 NHGQTGKADTFFRQLLKKGIQDEV-AFNNLIRGHAKEGNPDLAFEMLKIMGR-RGVSRDA 547
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
SY LI ++G +A+ D M G P S + S++ +L +G V+ + +
Sbjct: 548 ESYKLLIKSYLSKGEPADAKTALDSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNS 607
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
M++K + +L+ + RG EA+ + L N N
Sbjct: 608 MLDKGITENLDLVAKILEALFMRGHDEEALGRINLLMNCN 647
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ + +++ LI G +G A E+ M R+G ++SY L+ + GE +
Sbjct: 509 IQDEVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKT 568
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT-YTKLLDVL 404
L MIE D +R+V++ + GR A +++ + +K + + K+L+ L
Sbjct: 569 ALDSMIENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLVAKILEAL 627
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 23/264 (8%)
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL 189
Q +AS Y+++ + L + D Q+L E +N +I A+
Sbjct: 471 QSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKG--IQDEVAFNNLIRGHAKEGNP 528
Query: 190 SRAVYVFKYMKN---SRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
A + K M SR+ E SY +L ++LS+G+ + M+
Sbjct: 529 DLAFEMLKIMGRRGVSRDAE------SYKLLIKSYLSKGEPA--------DAKTALDSMI 574
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
+G PD S+++ V A R+ + M + N ++ L +G
Sbjct: 575 ENGHSPDSALFRSVMESLFADGRVQTASRVMNSM-LDKGITENLDLVAKILEALFMRGHD 633
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
+ A + + P +NSL+S L G+ K L +E++ ++F +Y V
Sbjct: 634 EEALGRINLLMNCNCPPD---FNSLLSVLCEKGKTTSAFKLLDFGLERECNIEFSSYEKV 690
Query: 367 LDEICRRGRAGEAMKLLKELQNKN 390
LD + G+ A +L ++ K
Sbjct: 691 LDALLGAGKTLNAYAILCKIMEKG 714
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 136/291 (46%), Gaps = 29/291 (9%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKL 189
F+ + TY + L + E ++ ++M+A +P YN++I+ +
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDI----FTYNSLIHALCNLCEW 212
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
+ M S+ + P++ S NI+ A GK T + V M+ G
Sbjct: 213 KHVTTLLNEMVKSKIM---PNVVSLNIVVDALCKEGKVTEAHDV--------VDMMIQGG 261
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+EPD+ + +++ G+ L + +++A+++F M V + N SY+ LI+G C R A
Sbjct: 262 VEPDVVTYAALMDGHCLRSEMDEAVKVFDMM-VRNGCVCNVVSYNTLINGYCKIQRIDKA 320
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
L +EM R+ +P++ +Y++L+ L G +++ + EM+ + + +TY +LD
Sbjct: 321 MYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDY 380
Query: 370 ICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVLEDDFGN 410
+C+ R EAM LLK ++ NL IDG L+ D F N
Sbjct: 381 LCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSN 431
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ L K+M + GI PD+++L +I + N V+ AL + ++ + + P++ ++ L
Sbjct: 74 TVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKI-LKLGHQPDTATFTTL 132
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ GLC G+ A ++ D+M +GF P+ +Y +L++ L + ++ E + EMI K
Sbjct: 133 VRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGI 192
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D TY +++ +C LL E+
Sbjct: 193 SPDIFTYNSLIHALCNLCEWKHVTTLLNEM 222
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 119/262 (45%), Gaps = 27/262 (10%)
Query: 155 EMDDVV---NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
EMD+ V + M+ C + YNT+I + + +++ +A+Y+F+ M E P+
Sbjct: 281 EMDEAVKVFDMMVRNGCVCNVVS-YNTLINGYCKIQRIDKAMYLFEEMCRQ---ELIPNT 336
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
+Y+ L G+ ++ LF +MV G P++ + S++ Y+ NH
Sbjct: 337 MTYSTLIHGLCHVGR--------LQDAIALFNEMVACGQIPNLVTY-SILLDYLCKNH-- 385
Query: 272 DALRIFHQMGVV-----YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
R+ M ++ N P+ Y+ I G+C G + AR+L + +G P
Sbjct: 386 ---RLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVW 442
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++N ++ L G ++E K EM E + TY T+ + + + A++LL+E+
Sbjct: 443 THNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEM 502
Query: 387 QNKNL-IDGYTYTKLLDVLEDD 407
+ D T L+ +L DD
Sbjct: 503 LARGFSADVSTTALLVKMLSDD 524
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 20/213 (9%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG---TEALYNTIIYFFAEARKLSRAVYV 195
TY + L Q+ + N+M+A CG Y+ ++ + + +L+ A+ +
Sbjct: 338 TYSTLIHGLCHVGRLQDAIALFNEMVA----CGQIPNLVTYSILLDYLCKNHRLAEAMAL 393
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
K ++ S NL+ P ++ YNI G +E R LF + G++PD++
Sbjct: 394 LKAIEGS-NLD--PDVQVYNIAIDGMCRAGD--------LEAARDLFSNLAPRGLQPDVW 442
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N MI+G +++A ++F +M L N +Y+ + GL +T A +L +E
Sbjct: 443 THNIMIRGLCKRGLLDEASKLFREMDE-NGCLRNGCTYNTITQGLLQNNKTSRAIQLLEE 501
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
M +GF + LV L+ +G ++++VK +
Sbjct: 502 MLARGFSADVSTTALLVKMLSDDG-LDQSVKQI 533
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 136/277 (49%), Gaps = 24/277 (8%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R D Y + K+ + D+ ++M+ + +N++IY F +L AV
Sbjct: 191 RPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNV-VTFNSLIYGFCIVGQLKEAV 249
Query: 194 YVFKYMK-NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ M N+ N P++ ++NIL G+ ++ + M+ G+EP
Sbjct: 250 GLLNEMSLNNVN----PNVYTFNILIDGLCKEGE--------VKKATSVLSVMIKQGVEP 297
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + S++ GY L VN A +F+ + + PN SY +I+GLC A +L
Sbjct: 298 NVVTYTSLMDGYFLVKEVNKAKHVFNTISL-RGVTPNVHSYSVMINGLCKNKMVDEAVKL 356
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE----KQRPVDFITYRTVLD 368
EM K P++ +Y+SL+ L +G + + +W++I+ + +P + ITY ++L+
Sbjct: 357 FKEMHLKNMTPNTVTYSSLIDGLCKSGRISD----VWDLIDEINNRGQPANIITYNSLLN 412
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+C+ + +A+ LL +++++ + D TYT L+D L
Sbjct: 413 GLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGL 449
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 116/231 (50%), Gaps = 15/231 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLE-CRPSIRSYNILFTAFLSRGKNTYINHVY 234
Y +++ + +++++A +VF N+ +L P++ SY+++ KN ++
Sbjct: 302 YTSLMDGYFLVKEVNKAKHVF----NTISLRGVTPNVHSYSVMINGLC---KNKMVD--- 351
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
E ++ LFK+M + P+ + +S+I G S ++D + ++ N +Y+
Sbjct: 352 -EAVK-LFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINN-RGQPANIITYN 408
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L++GLC + A L +MK +G P +Y +LV L NG +++ + +++ K
Sbjct: 409 SLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCK 468
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGYTYTKLLDVL 404
P++ Y +++ +C+ G EA+ LL +++ N + D TY L+ L
Sbjct: 469 GYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISAL 519
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I + + + AV +FK M + +N+ P+ +Y+ L G+ +
Sbjct: 337 YSVMINGLCKNKMVDEAVKLFKEM-HLKNMT--PNTVTYSSLIDGLCKSGR--------I 385
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ L ++ N G +I + NS++ G ++ V+ A+ + +M G+ P+ +
Sbjct: 386 SDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQ----PDMST 441
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y L+ GLC GR K+A+ + ++ KG+ + + Y +++ L G +E + L +M
Sbjct: 442 YTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQME 501
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ D +TY T++ + + + G+A+KLL+E+
Sbjct: 502 DNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P IF N ++ + NH A+ QM + P F+++ LI+ + A
Sbjct: 51 PPIFEFNKILSSLVKMNHFKIAISFSQQMEL-KGIQPEMFTFNILINCFSHLCQLNFAFS 109
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ ++ + G+ P + + N+L+ L LNG+V+E + +I K+ +D ++Y T+++ +C
Sbjct: 110 MVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLC 169
Query: 372 RRGRAGEAMKLLKELQNKNLI--DGYTYTKLLD 402
+ G A++LL++++ L+ D YT ++D
Sbjct: 170 KSGETRAALQLLRKIEGLLLVRPDVIMYTAIID 202
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 13/220 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+ +Y +M L KM E + +M + Y+++I ++ ++S V
Sbjct: 333 NVHSYSVMINGLCKNKMVDEAVKLFKEM-HLKNMTPNTVTYSSLIDGLCKSGRISD---V 388
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ + N +I +YN L NH + I L +M ++GI+PD+
Sbjct: 389 WDLIDEINNRGQPANIITYNSLLNGLCK-------NHQVDKAI-ALLTKMKDEGIQPDMS 440
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +++ G + + DA RI+ + + Y N Y +I+GLC +G A L +
Sbjct: 441 TYTTLVDGLCKNGRLKDAQRIYQDL-LCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQ 499
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
M+ G +P + +Y +L+SAL N + + VK L EMI ++
Sbjct: 500 MEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARE 539
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
+QM GI+P++F+ N +I + +N A + ++ + Y P++ + + L+ GLC
Sbjct: 77 QQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKI-LKLGYQPDTVTVNTLLRGLCL 135
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL--WEMIEKQRPVDF 360
G+ K A D + RK F SY +L++ L +GE ++ L E + RP D
Sbjct: 136 NGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRP-DV 194
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL 386
I Y ++D C+ +A L E+
Sbjct: 195 IMYTAIIDSFCKDKLVIDAYDLYSEM 220
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 137/283 (48%), Gaps = 15/283 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L++F+W + TY+ + + L ++ + +ML T YNT+I
Sbjct: 393 LKIFHWMEGHGSLA-NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLI 450
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ ++ A + MK + C P +YN L + F GK +E+
Sbjct: 451 NGYLTKGNVNNAARLLDLMKENG---CEPDEWTYNELVSGFSKWGK--------LESASF 499
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
F++MV G+ P+ S ++I G+ V+ AL + +M + PN SY+ +I+GL
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM-GCNPNVESYNAVINGL 558
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ R A ++CD+M +G +P+ +Y +L+ L NG + K +M +++ +
Sbjct: 559 SKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
TY +++ +C+ G+A EA LLKE++ K L D T+T L+D
Sbjct: 619 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 661
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 178/403 (44%), Gaps = 73/403 (18%)
Query: 59 SCYSAIALSRSSSRGVGKRSKADSKPALDDTQFRCA--VSELPPRFNNEELCNVMTLQED 116
S + A+ SR + + R A L Q++ + + +L P+ + ++ + +D
Sbjct: 32 SSHFAVPASREPFQAIVSRVCA----ILSRVQWKGSSELKQLSPQLKAHHVAEIVAVHKD 87
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV----------------V 160
++ F W SK+P ++H+ + + M +L +++ D + V
Sbjct: 88 TESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRV 147
Query: 161 NQMLATPSFCGTE-ALY--NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
L S G +LY NT++ A+ + A ++K M NS +PS+ ++N L
Sbjct: 148 ADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG---IQPSLLTFNTL 204
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+GK + + Q+ + PD+F+ S+I G+ + +++ A +F
Sbjct: 205 INILSKKGK--------VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF 256
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE---------------------- 315
+M V PNS +Y LI+GLC +GR A ++ +E
Sbjct: 257 DRM-VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 315
Query: 316 -------------MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
MK++G P+ ++Y +L+S L+ G++E + +M+++ + +T
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGYTYTKLLDVL 404
Y +++E+C GR A+K+ ++ + +L + TY +++ L
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 42/215 (19%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
CRP++++Y L + GK +E L+ +M+ +G+ P+ + N++I +
Sbjct: 334 CRPNVQTYTALISGLSRLGK--------LEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385
Query: 267 SNHVNDALRIFHQM---GVVYNY-------------------------------LPNSFS 292
+ AL+IFH M G + N LP +
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 445
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI+G +G NA L D MK G P +YN LVS + G++E EM+
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
E + ++Y ++D + G+ A+ LLK ++
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 126/253 (49%), Gaps = 15/253 (5%)
Query: 153 YQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
Y+ +DD +N + + T Y+++I + S A + M + P+
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---INPN 254
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ ++N L AF+ GK ++E + L M+ I+PDIF+ NS+I G+ + + +
Sbjct: 255 LVTFNALIDAFVKEGK-------FVEAEK-LHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ A ++F M V + P+ +Y+ LI G C R ++ EL EM +G V + +Y +
Sbjct: 307 DKAKQMFEFM-VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ L +G+ + K +M+ P D +TY +LD +C G+ +A+++ +Q
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 391 L-IDGYTYTKLLD 402
+ +D Y YT +++
Sbjct: 426 IKLDIYIYTTMIE 438
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A+ +K + + + M + L ++ +YNIL F R + +
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKM---QRLGISHNLYTYNILINCFCRRSQ--------I 61
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M+ G EP I +L+S++ GY ++DA+ + QM V Y P++ ++
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTT 120
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL + A L D M ++G P+ +Y +V+ L G+++ L +M +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D + + T++D +C+ +A+ L KE++ K + + TY+ L+ L
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 118/259 (45%), Gaps = 32/259 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF-----LSRGKNTY- 229
YN++I F +L +A +F++M + +C P + +YN L F + G +
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSK---DCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 230 -INH--------VYMETIRCLF------------KQMVNDGIEPDIFSLNSMIKGYILSN 268
++H Y I+ LF KQMV+DG+ PDI + + ++ G +
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ AL +F M L + + Y +I G+C G+ + +L + KG P+ +Y
Sbjct: 410 KLEKALEVFDYMQKSEIKL-DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+++S L ++E L +M E D TY T++ R G + +L++E+++
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Query: 389 KNLI-DGYTYTKLLDVLED 406
+ D T + ++L D
Sbjct: 529 CRFVGDASTIGLVANMLHD 547
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 48/263 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F ++S A+ + M L PSI + + L N Y + +
Sbjct: 48 YNILINCFCRRSQISLALALLGKM---MKLGYEPSIVTLSSLL--------NGYCHGKRI 96
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L QMV G PD + ++I G L N ++A+ + +M V PN +Y
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGV 155
Query: 296 LIHGLCAQG-----------------------------------RTKNARELCDEMKRKG 320
+++GLC +G +A L EM+ KG
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+ +Y+SL+S L G + + L +MIEK+ + +T+ ++D + G+ EA
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 381 KLLKELQNKNL-IDGYTYTKLLD 402
KL ++ +++ D +TY L++
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLIN 298
>gi|413944087|gb|AFW76736.1| hypothetical protein ZEAMMB73_938811 [Zea mays]
Length = 496
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 14/237 (5%)
Query: 151 KMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
++ ++ D N+ L P+ C +YN ++ + + +L A V M+ + +P+
Sbjct: 164 ELLADLRDPRNKYLPRPNTC----VYNILVKHYVKNGELETAFKVLDEMREYTCADVKPN 219
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN-DGIEPDIFSLNSMIKGYILSNH 269
+ +Y+ L GK M+ LF++M+ D I PD N +I G+
Sbjct: 220 LVTYSTLIGGLCRGGK--------MKEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQ 271
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
V+ A IF M PN+F+Y LI+G C + + AR + +EM+ G P + SY
Sbjct: 272 VDKARAIFGFMRK-NECEPNTFNYATLINGHCKKADIEAARSVFEEMRNSGVEPDAVSYT 330
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+L+ L +G V+E + + EM EK D +TY V++ +C+ GR EAM LL+ +
Sbjct: 331 ALIGCLCRHGSVDEGIGLVLEMKEKGCRADVVTYNLVIEGLCKDGRTVEAMGLLESV 387
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 109/254 (42%), Gaps = 12/254 (4%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + L +E ++ +M+ + LYN II F ++ +A +F +
Sbjct: 222 TYSTLIGGLCRGGKMKEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIFGF 281
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M+ + EC P+ +Y L N + +E R +F++M N G+EPD S
Sbjct: 282 MRKN---ECEPNTFNYATLI--------NGHCKKADIEAARSVFEEMRNSGVEPDAVSYT 330
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I V++ + + +M + +Y+ +I GLC GRT A L + +
Sbjct: 331 ALIGCLCRHGSVDEGIGLVLEMKE-KGCRADVVTYNLVIEGLCKDGRTVEAMGLLESVPL 389
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G + SY L++ L GE++ V L M+ + + +L +C GR +
Sbjct: 390 EGVKLNVASYRILMNCLCSRGEMDRAVGLLGLMLGRGFLPHYAASNNLLIGLCDAGRIAD 449
Query: 379 AMKLLKELQNKNLI 392
A L L + +
Sbjct: 450 ATMALYGLADAGFM 463
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 145/336 (43%), Gaps = 43/336 (12%)
Query: 87 DDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASK----QPRFR--HDASTY 140
+ + CA + L + E C V+ + LV L+ A K RF+ +D T+
Sbjct: 150 EKGKLHCATALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTF 209
Query: 141 HIMTRKL---GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
+I+ R L G A+ E+ ++ P YNT+I F ++ +L +A +F
Sbjct: 210 NILIRGLCGVGKAEKAVELLGGMSGFGCLPDI----VTYNTLIKGFCKSNELKKANEMFD 265
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGK---------------------------NTYI 230
+K+S C P + +Y + + + GK + Y
Sbjct: 266 DVKSSSG--CSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
M T + +M++ G PD+ + S+I GY VN R++ +M PN+
Sbjct: 324 KAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNA-RGMFPNA 382
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
F+Y LI+ LC + R AREL ++ K +P YN ++ G+V E + + E
Sbjct: 383 FTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEE 442
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
M +K+ D IT+ ++ C +GR EA+ + ++
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 134/329 (40%), Gaps = 46/329 (13%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM---LAT 166
V L +P + + ++ + RH TY+++TR L A M+ D+ QM + +
Sbjct: 76 VKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGMH----DLAGQMFECMKS 131
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVF------------------------------ 196
L ++ FAE KL A +
Sbjct: 132 DGISPNSRLLGFLVSSFAEKGKLHCATALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAM 191
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
K + + +++NIL GK E L M G PDI +
Sbjct: 192 KLFEEHLRFQSCNDTKTFNILIRGLCGVGK--------AEKAVELLGGMSGFGCLPDIVT 243
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N++IKG+ SN + A +F + P+ +Y +I G C G+ + A L D+M
Sbjct: 244 YNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDM 303
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
R G P++ ++N LV A GE+ + +MI D +T+ +++D CR G+
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 377 GEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ +L +E+ + + + +TY+ L++ L
Sbjct: 364 NQGFRLWEEMNARGMFPNAFTYSILINAL 392
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 25/318 (7%)
Query: 83 KPALDDTQFRCAVSEL------PPRFNNEELCNVMT---LQEDPLVCLELFNWASKQPRF 133
+P D Q +SEL P + EL + + + L F+W KQ +
Sbjct: 108 EPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDY 167
Query: 134 RH--DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
+ D S I+ LG ++ N L F Y ++I FA + +
Sbjct: 168 QSMLDNSVVAIIISMLGKEGRVSSAANMFNG-LQEDGFSLDVYSYTSLISAFANSGRYRE 226
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
AV VFK M+ C+P++ +YN++ F G I L ++M +DGI
Sbjct: 227 AVNVFKKMEEDG---CKPTLITYNVILNVFGKMG-------TPWNKITSLVEKMKSDGIA 276
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVV-YNYLPNSFSYDYLIHGLCAQGRTKNAR 310
PD ++ N++I + +A ++F +M ++Y + +Y+ L+ R K A
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY--DKVTYNALLDVYGKSHRPKEAM 334
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
++ +EM GF PS +YNSL+SA A +G ++E ++ +M EK D TY T+L
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 371 CRRGRAGEAMKLLKELQN 388
R G+ AM + +E++N
Sbjct: 395 ERAGKVESAMSIFEEMRN 412
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 13/260 (5%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
K F +D TY+ + G + +E V+N+M+ F + YN++I +A
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN-GFSPSIVTYNSLISAYARDGM 364
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L A+ + M +P + +Y L + F GK +E+ +F++M N
Sbjct: 365 LDEAMELKNQMAEKGT---KPDVFTYTTLLSGFERAGK--------VESAMSIFEEMRNA 413
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G +P+I + N+ IK Y + ++IF ++ V P+ +++ L+ G
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC-GLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
+ EMKR GFVP +++N+L+SA + G E+ + M++ D TY TVL
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 369 EICRRGRAGEAMKLLKELQN 388
+ R G ++ K+L E+++
Sbjct: 533 ALARGGMWEQSEKVLAEMED 552
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 37/210 (17%)
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ SY L +AF + G+ Y E + +FK+M DG +P + + N +
Sbjct: 208 VYSYTSLISAFANSGR-------YREAVN-VFKKMEEDGCKPTLITYNVI---------- 249
Query: 271 NDALRIFHQMGVVYNYL-------------PNSFSYDYLIHGLCAQGRT-KNARELCDEM 316
L +F +MG +N + P++++Y+ LI C +G + A ++ +EM
Sbjct: 250 ---LNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEM 305
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
K GF +YN+L+ + +E +K L EM+ +TY +++ R G
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 377 GEAMKLLKELQNKNL-IDGYTYTKLLDVLE 405
EAM+L ++ K D +TYT LL E
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 126/325 (38%), Gaps = 73/325 (22%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAE 185
K+ F + T++ + +++ V +ML TP + YNT++ A
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL----STYNTVLAALAR 536
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI------- 238
++ V M++ R C+P+ +Y L A+ + GK + H E +
Sbjct: 537 GGMWEQSEKVLAEMEDGR---CKPNELTYCSLLHAY-ANGKEIGLMHSLAEEVYSGVIEP 592
Query: 239 -------------RC--------LFKQMVNDGIEPDIFSLNSMIKGY------ILSNHVN 271
+C F ++ G PDI +LNSM+ Y +N V
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
Query: 272 DAL--RIFHQMGVVYNYL--------------------------PNSFSYDYLIHGLCAQ 303
D + R F YN L P+ SY+ +I+ C
Sbjct: 653 DYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRN 712
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
R ++A + EM+ G VP +YN+ + + A + EE + + MI+ + TY
Sbjct: 713 TRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Query: 364 RTVLDEICRRGRAGEAMKLLKELQN 388
+++D C+ R EA +++L+N
Sbjct: 773 NSIVDGYCKLNRKDEAKLFVEDLRN 797
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNY---LPNSFSYDYLIHGLCAQGRTKNARELC 313
L + +KG + ALR F +Y L NS +I L +GR +A +
Sbjct: 138 LLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSV-VAIIISMLGKEGRVSSAANMF 196
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+ ++ GF SY SL+SA A +G E V +M E ITY +L+ +
Sbjct: 197 NGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKM 256
Query: 374 GRAGEAMKLLKELQNKNLI--DGYTYTKLL 401
G + L E + I D YTY L+
Sbjct: 257 GTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 180/411 (43%), Gaps = 37/411 (9%)
Query: 4 IAGR---NWLRQIFSHRTFNKHLCCTNSSHNSKTLSNYYLSQTQINPHLKLSSNAILCSC 60
I GR NW Q + HLCC H+ + L N S + +++A +
Sbjct: 18 IHGRSRFNWTAQRLDGQ---DHLCC----HSGEVLCNRSPSPPSMAARTLANTHASPLAS 70
Query: 61 YSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVC 120
+ A LS +SS ++ P + +S+ P N + V+ Q++P
Sbjct: 71 HIAQLLSTASSITSFLQTLNPQNPTPNSPTSISPLSQFAPFLNPXLVIQVIKSQKNPYHA 130
Query: 121 LELFNWAS----KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY 176
L FNWAS + H Y +T L + ++ ++ F +
Sbjct: 131 LFFFNWASNPNPNPNNYSHSHLCYVAITDLLISHGLFSTASSLLQSHHRLSDFAAAK--- 187
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
+ + + + A++ F K + C + SYN + F+ N + +
Sbjct: 188 --FVKAYGDRGDIRGAIHWFHRAKKMESGRC---LFSYNAILGVFVK------ANRIMLA 236
Query: 237 TIRCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
R +F Q+V +G ++PD+ + ++I+GY + +A +F +MG PN +Y+
Sbjct: 237 --RAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEMGCK----PNLVTYNT 290
Query: 296 LIHGLCAQGRTKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I+G C +G ++A ++ D+M + + +P + +Y +L+ GE+EE +K + EM+ +
Sbjct: 291 MINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSR 350
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
+ +TY ++ +C G EA +++ ++ L D T+T +L L
Sbjct: 351 NCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGL 401
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
D +V + + P + Y TII + + + A VF M C+P++ +YN
Sbjct: 241 DQIVKEGVVKPDV----STYTTIIRGYCKMGMIENAKNVFDEMG------CKPNLVTYNT 290
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMV-NDGIEPDIFSLNSMIKGYILSNHVNDALR 275
+ F +G ME+ + QM + PD + ++I GY + +A++
Sbjct: 291 MINGFCKKG--------LMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMK 342
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+M V N PN +Y+ +I+GLC G A+ + M+ G + ++ S++ L
Sbjct: 343 YMEEM-VSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGL 401
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ G++++ ++L EM+ D Y V++E C+ G+A +A+ LLKE++++ +
Sbjct: 402 CVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGI 457
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 144/325 (44%), Gaps = 51/325 (15%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
+F+ K+ + D STY + R M + +V ++M P+ YNT+I
Sbjct: 239 VFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEMGCKPNL----VTYNTMING 294
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
F + + A+ + M + +C P +Y L + RG+ +E
Sbjct: 295 FCKKGLMESAMKIVDQMTETE--DCMPDTVTYTTLIDGYCKRGE--------LEEAMKYM 344
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYL------------ 287
++MV+ EP++ + N++I G L+ +V++A R+ +M G+ N
Sbjct: 345 EEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVV 404
Query: 288 -------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ +Y +++ C G+ +A L EMK +G PS S+
Sbjct: 405 GKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSF 464
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR-RGRAGEAMKLLKEL- 386
N++ L +G+ ++ L +M + +F++Y TV+D +C+ +GR E + + ++
Sbjct: 465 NAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMC 524
Query: 387 QNKNLIDGYTYTKLLDVLEDDFGNS 411
+N + +D Y+ L+ +D GN+
Sbjct: 525 RNGHHLDASMYSWLVKGYCED-GNA 548
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 15/245 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A + +I+ KL A +++K L ++Y ++ + GK
Sbjct: 392 ATHTSILKGLCVVGKLDDAA---RHLKEMVGLGMEADAKAYGVVVNEYCKIGK------- 441
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ L K+M + GI P + S N++ + + S + A I QM + PN SY
Sbjct: 442 -ADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQL-GCTPNFLSY 499
Query: 294 DYLIHGLC-AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+I GLC A+GR E D+M R G + Y+ LV +G + ++ EM+
Sbjct: 500 STVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEML 559
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK-NLIDGYTYTKLLDV-LEDDFGN 410
+ ++ ++ + + + +A E K +E+ + ID + Y ++LD L + GN
Sbjct: 560 DMGYVINLESFLAFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRILDEHLCKNLGN 619
Query: 411 SIRHH 415
R H
Sbjct: 620 GRREH 624
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 15/255 (5%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A KMY+ + + +MLA C E +NT+I F + ++ A F+ M+ +
Sbjct: 251 AGKMYKA-EAFMKEMLAN-KICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQG---LK 305
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+I +YN L + GK +E L+ +MV G++P+I + N++I G+
Sbjct: 306 PNIVTYNSLINGLCNNGK--------LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKK 357
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ +A ++F + +PN +++ +I C +G + LC M +G +P+ +Y
Sbjct: 358 MMKEATKVFDDVSK-QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N L++ L +++ + L EM K D +TY ++D +C+ ++ A KLL E+ N
Sbjct: 417 NCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476
Query: 389 KNLIDGY-TYTKLLD 402
L + TY L+D
Sbjct: 477 LGLKPNHVTYNTLMD 491
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 115/246 (46%), Gaps = 20/246 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + + + A VF + E P++ ++N + A+ G M
Sbjct: 346 YNALINGFCKKKMMKEATKVFDDVSKQ---ELVPNVITFNTMIDAYCKEG--------MM 394
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
E L M+++GI P++ + N +I G + A + ++M G+ + + +
Sbjct: 395 EEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVV----T 450
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI GLC +++NA +L +EM G P+ +YN+L+ + G+++ + M
Sbjct: 451 YNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRME 510
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKL--LDVLEDDFGN 410
++++ + +TY ++ C+ + A LL E+ K L T + L++LE F
Sbjct: 511 KERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSP 570
Query: 411 SIRHHL 416
I HL
Sbjct: 571 DIEGHL 576
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 105/231 (45%), Gaps = 16/231 (6%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N ++ + K+ YV+K M R ++ ++NI GK +
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRR---IHTNLNTFNIFINGLCRAGK--------LN 217
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI--FHQMGVVYNYLPNSFSYD 294
+ M GI P++ + N+++ GY + F + + PN +++
Sbjct: 218 KAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFN 277
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE-MIE 353
LI G C A++ +EM+++G P+ +YNSL++ L NG++EE + +LW+ M+
Sbjct: 278 TLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAI-DLWDKMVG 336
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDV 403
+ +TY +++ C++ EA K+ ++ + L+ T+ ++D
Sbjct: 337 LGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDA 387
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 40/179 (22%)
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
Y+ ++ + F + + G + + S N ++ + N + D ++ +M +
Sbjct: 139 AYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEM-IKRRIH 197
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
N +++ I+GLC G+ A + ++MK G P
Sbjct: 198 TNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISP------------------------ 233
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK---LLKE-LQNKNLIDGYTYTKLLD 402
+ +TY T++D C+RG AG+ K +KE L NK + T+ L+D
Sbjct: 234 -----------NVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLID 281
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 128/272 (47%), Gaps = 20/272 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y I+ L A+ E ++ +M T YNT++ KL A+ +
Sbjct: 289 DFYAYSILINGLCKARRPGEAKEMFQEMRGR-GISPTVVTYNTLLEGLLSTAKLQDAMEL 347
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+M + L P SYN++ F + G N Y CLF+ M+ DGI + +
Sbjct: 348 TYFMLDQGRL---PDTCSYNLMIRGFCANGDT---NEAY-----CLFQDMIKDGIVLNTW 396
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYN---YLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ N MI G+I + A +F +M N PN F+Y+ LI LC + + A +L
Sbjct: 397 TYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKL 456
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM--IEKQRPVDFITYRTVLDEI 370
M+ KGFVPS K + L+S LA G +++ + EM I Q+ V + +LD I
Sbjct: 457 LSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG--SSNILLDGI 514
Query: 371 CRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
RRG EA LK++ + ++ D +TY KL+
Sbjct: 515 LRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLV 546
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 19/268 (7%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLS 190
+ D TY+ M L K E ++ +M +P+F Y T+I + +L
Sbjct: 146 KPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTF----VTYTTLIDHLCKFTRLQ 201
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+A VF+ M C + +Y++LF GK + VY + R N +
Sbjct: 202 QAYEVFEKMAEG---PCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCR------KNVCM 252
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+ +SL + + +V A + MG P+ ++Y LI+GLC R A+
Sbjct: 253 TDNTYSLVVLGLSKMDGGNVEAAKLVTEMMG--KKIAPDFYAYSILINGLCKARRPGEAK 310
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
E+ EM+ +G P+ +YN+L+ L ++++ ++ + M+++ R D +Y ++
Sbjct: 311 EMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGF 370
Query: 371 CRRGRAGEAMKLLKELQNKNLI-DGYTY 397
C G EA L +++ ++ + +TY
Sbjct: 371 CANGDTNEAYCLFQDMIKDGIVLNTWTY 398
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 103/212 (48%), Gaps = 13/212 (6%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LYN +I +A L+ A K M C P++ SYNI+ + + +N
Sbjct: 12 LYNNLISCLCKAGMLAEAESYLKRMPQ----HCAPNVVSYNIIIDGY-CKARN------- 59
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E ++M G P + +S+++ + + +V+ A+ +F +M P+ +++
Sbjct: 60 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPA-KGCEPDIVNFN 118
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GL + AREL M +G P +YN++++ L +++E V L M ++
Sbjct: 119 VLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQE 178
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
F+TY T++D +C+ R +A ++ +++
Sbjct: 179 DVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKM 210
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 114/257 (44%), Gaps = 16/257 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
+A Y+ + L A M E + + +M P C + YN II + +AR + +A+
Sbjct: 9 NAILYNNLISCLCKAGMLAEAESYLKRM---PQHCAPNVVSYNIIIDGYCKARNIEKAL- 64
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+++ L P+ +Y+ + +F G + V F +M G EPDI
Sbjct: 65 --AFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDV--------FAEMPAKGCEPDI 114
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N ++ G + +++A +F M P+ +Y+ +I GLC + A L +
Sbjct: 115 VNFNVLLSGLWRARKIHEARELFRSMNS-RGCKPDVVTYNTMIAGLCKWKKLDEAVFLLE 173
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
MK++ P+ +Y +L+ L +++ + +M E Y + +++ R G
Sbjct: 174 RMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAG 233
Query: 375 RAGEAMKLLKELQNKNL 391
+ EA ++ ++ KN+
Sbjct: 234 KLVEASRVYSDMCRKNV 250
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 22/197 (11%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A +++ M N + P+ E L +++ K + FK + R+
Sbjct: 414 AWMLFKRMQSGKNDKVPAPNMFTYEILISSLC-------KTDQVEEAFKLLSAMRDKGFV 466
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PS++ + +L + G+ +Y E R +Q+V S N ++ G +
Sbjct: 467 PSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG--------SSNILLDGILRRG 518
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V++A QM G+V P+ F+YD L+ GLC QG+ AR+L +E+ R G P +
Sbjct: 519 SVDEAKDFLKQMTDTGIV----PDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPEN 574
Query: 326 KSYNSLVSALALNGEVE 342
+ L+ AL G+ +
Sbjct: 575 QGLRQLLGALCAQGDFQ 591
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++ S N +I GY + ++ AL +M + + P +Y ++ C G A +
Sbjct: 42 PNVVSYNIIIDGYCKARNIEKALAFLREMEEL-GHPPTPHAYSSIVQSFCKTGNVSKAMD 100
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ EM KG P ++N L+S L ++ E + M + D +TY T++ +C
Sbjct: 101 VFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLC 160
Query: 372 RRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
+ + EA+ LL+ ++ +++ + TYT L+D L
Sbjct: 161 KWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 194
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 19/227 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY I+ L +E +++ M F + ++ ++ A A +L A ++K
Sbjct: 436 TYEILISSLCKTDQVEEAFKLLSAM-RDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKE 494
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + C+ + S NIL L RG ++ + KQM + GI PD F+ +
Sbjct: 495 MSR---INCQQLVGSSNILLDGILRRGS--------VDEAKDFLKQMTDTGIVPDKFTYD 543
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++ G + A ++ ++ V P + L+ LCAQG + A E +
Sbjct: 544 KLVVGLCWQGKADQARKLVEEL-VRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPS 602
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV-DFITYR 364
G + +N+LV++ L ++ + +MIE++ V D I R
Sbjct: 603 VGVEVTLGMHNTLVTSCCLARKL-----DYLDMIEQREGVPDVIVER 644
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 3/158 (1%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M+ G+ P+ N++I + + +A +M + PN SY+ +I G C
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMP--QHCAPNVVSYNIIIDGYCKAR 58
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ A EM+ G P+ +Y+S+V + G V + + EM K D + +
Sbjct: 59 NIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFN 118
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+L + R + EA +L + + ++ D TY ++
Sbjct: 119 VLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMI 156
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 13/268 (4%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY++M M +E D++ +M+ P YNT++ ++ ++ A+ +
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDV----VTYNTVMDGLCKSSRVEEALLL 450
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEPDI 254
F M+ L C P+ RS+N + + K + ++ L K+M +DG PD+
Sbjct: 451 FNEMER---LGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDV 507
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ +++I G V+DA + M V P + + LIHGLC GR K ARE+ D
Sbjct: 508 VTYSTLISGLCSIARVDDARHLLEDM-VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 566
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M G P +YN+LV G+ E + L +M+ + + +TY ++ +C+
Sbjct: 567 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 626
Query: 375 RAGEAMKLLKELQNKNLIDG-YTYTKLL 401
R EA + ++++ +TYT L+
Sbjct: 627 RLPEACGVFAQMKSSGCAPNLFTYTALI 654
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 12/218 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVF---KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
E Y T++ +A ++ AV +F + +S + PS+R YNI+ +N
Sbjct: 247 EVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLC---QNDR 303
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
I+ +F++M + PD +S +I G + +NDA +F ++ + P+
Sbjct: 304 IDEAVQ-----MFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKL-LHSGVTPS 357
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ +Y LIHGLC +AREL +M R+G PS +YN ++ A G +EE +
Sbjct: 358 TVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIK 417
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+MIE D +TY TV+D +C+ R EA+ L E++
Sbjct: 418 KMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEME 455
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 135/316 (42%), Gaps = 62/316 (19%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D+ +Y I+ L A + ++ ++L TPS Y ++I+ A A
Sbjct: 322 DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS----TVAYTSLIHGLCMANSFDDA 377
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F M N R C PS +YN++ A RG +E L K+M+ DG P
Sbjct: 378 RELFADM-NRRG--CPPSPVTYNVMIDASCKRG--------MLEEACDLIKKMIEDGHVP 426
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYN------------------------ 285
D+ + N+++ G S+ V +AL +F++M G N
Sbjct: 427 DVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRG 486
Query: 286 ----------------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
++P+ +Y LI GLC+ R +AR L ++M ++ P+ + N
Sbjct: 487 KLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 546
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+L+ L G ++E + L M+ + D +TY T++ CR G+ A +LL ++ +
Sbjct: 547 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 606
Query: 390 NLIDG-YTYTKLLDVL 404
L TYT L+ L
Sbjct: 607 GLAPNVVTYTALVSGL 622
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I ++ A ++ + M +C+P++ + N L G+ +
Sbjct: 510 YSTLISGLCSIARVDDARHLLEDMVKR---QCKPTVVTQNTLIHGLCKAGR--------I 558
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R + MV+ G PD+ + N+++ G+ + A + M V PN +Y
Sbjct: 559 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM-VARGLAPNVVTYTA 617
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC R A + +MK G P+ +Y +L+ G+V+ +K EM+
Sbjct: 618 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 677
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
D + Y T+ E+C+ GR+ A+++L+E
Sbjct: 678 ISPDHVVYGTLAAELCKSGRSARALEILRE 707
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
NT+I+ +A ++ A V M +S P + +YN L G+ E
Sbjct: 546 NTLIHGLCKAGRIKEAREVLDAMVSSGQ---SPDVVTYNTLVHGHCRAGQT--------E 594
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
R L MV G+ P++ + +++ G +N + +A +F QM PN F+Y L
Sbjct: 595 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS-SGCAPNLFTYTAL 653
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I G C+ G+ +L EM G P Y +L + L +G ++ L E E R
Sbjct: 654 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 713
Query: 357 PVDFI--TYRTVLDEICRRGRAGEAMKLLKEL 386
+ YR +D + G+ A+ ++++
Sbjct: 714 SEAWGDEVYRFAVDGLLEAGKMEMALGFVRDM 745
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 115/269 (42%), Gaps = 55/269 (20%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
++++ ++ ++ A+ V++ +N R P + + N+L F SRG+ ++
Sbjct: 184 DSVLVGLMDSGRIDEALQVYR--ENRRE----PCLVTLNVLLEGFCSRGQ--------VD 229
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF----- 291
R L + M ++ PD S +++ G + V +A+R+F + + +S
Sbjct: 230 KARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLR 289
Query: 292 SYDYLIHGLC-----------------------------------AQGRTKNARELCDEM 316
Y+ +I GLC G+ +AR L ++
Sbjct: 290 GYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKL 349
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
G PS+ +Y SL+ L + ++ + +M + P +TY ++D C+RG
Sbjct: 350 LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGML 409
Query: 377 GEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
EA L+K++ ++ ++ D TY ++D L
Sbjct: 410 EEACDLIKKMIEDGHVPDVVTYNTVMDGL 438
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR-PSIRSYNILFTAFLSRGKNTYINHV 233
L+ ++I + + AV +F M+ EC P YN+L + LS+ + T
Sbjct: 12 LFTSVIQGWCNVGRTFEAVKIFSLME-----ECHSPYPDVYNVLIDS-LSKRQET----- 60
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
E ++ + + MV+ G PD F+ +++ G + +++A + +M +P F+
Sbjct: 61 --EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEM--RSRMIPPYFAT 116
Query: 294 D-YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+L H LC +G + A +L + M V +S +YN +V AL V++ ++ M
Sbjct: 117 SSFLAHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCKAARVDDALELARTMS 172
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
EK+ P+ + +VL + GR EA+++ +E
Sbjct: 173 EKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRE 205
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M GI P S+I+G+ +A++IF M ++ P+ Y+ LI L +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPD--VYNVLIDSLSKRQ 58
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
T+ +++ M +G P S ++ +++ L G+++E + EM + P F T
Sbjct: 59 ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKN 390
+ E+C RG A +LL+ + N
Sbjct: 119 FLAHELCLRGSMERAFQLLEIMPVAN 144
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 126/253 (49%), Gaps = 15/253 (5%)
Query: 153 YQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
Y+ +DD +N + + T Y+++I + S A + M + P+
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---INPN 253
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ ++N L AF+ GK ++E + L M+ I+PDIF+ NS+I G+ + + +
Sbjct: 254 LVTFNALIDAFVKEGK-------FVEAEK-LHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ A ++F M V + P+ +Y+ LI G C R ++ EL EM +G V + +Y +
Sbjct: 306 DKAKQMFEFM-VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 364
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ L +G+ + K +M+ P D +TY +LD +C G+ +A+++ +Q
Sbjct: 365 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 424
Query: 391 L-IDGYTYTKLLD 402
+ +D Y YT +++
Sbjct: 425 IKLDIYIYTTMIE 437
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 11/218 (5%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL A+ +F M SR L PSI +N L +A K + + L +M+
Sbjct: 22 KLDDAIGLFGGMVKSRPL---PSIFEFNKLLSAIAKMKKFDLVISL------ALLGKMMK 72
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G EP I +L+S++ GY ++DA+ + QM V Y P++ ++ LIHGL +
Sbjct: 73 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTLIHGLFLHNKAS 131
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A L D M ++G P+ +Y +V+ L G+++ L +M + D + + T++
Sbjct: 132 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 191
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +C+ +A+ L KE++ K + + TY+ L+ L
Sbjct: 192 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 229
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 118/259 (45%), Gaps = 32/259 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF-----LSRGKNTY- 229
YN++I F +L +A +F++M + +C P + +YN L F + G +
Sbjct: 292 YNSLINGFCMHDRLDKAKQMFEFMVSK---DCFPDLDTYNTLIKGFCKSKRVEDGTELFR 348
Query: 230 -INH--------VYMETIRCLF------------KQMVNDGIEPDIFSLNSMIKGYILSN 268
++H Y I+ LF KQMV+DG+ PDI + + ++ G +
Sbjct: 349 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 408
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ AL +F M L + + Y +I G+C G+ + +L + KG P+ +Y
Sbjct: 409 KLEKALEVFDYMQKSEIKL-DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 467
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+++S L ++E L +M E D TY T++ R G + +L++E+++
Sbjct: 468 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 527
Query: 389 KNLI-DGYTYTKLLDVLED 406
+ D T + ++L D
Sbjct: 528 CRFVGDASTIGLVANMLHD 546
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 22/288 (7%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARK 188
R D TY I+ Y++ ++++M TP YN ++ + +
Sbjct: 190 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDI----VTYNVVVNGICQEGR 245
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ A+ +++KN + C P+ SYNI+ + + E L +M
Sbjct: 246 VDDAI---EFLKNLPSYGCEPNTVSYNIVLKGLCTAER--------WEDAEELMGEMGQK 294
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G P++ + N +I V AL + Q+ Y PNS SY+ L+H C Q +
Sbjct: 295 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQI-PKYGCSPNSLSYNPLLHAFCKQKKMDK 353
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A D M +G P SYN+L++AL +GEV+ V+ L ++ +K I+Y TV+D
Sbjct: 354 AMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 413
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFGNSIR 413
+ + G+ EA++LL E+ +K L D TY+ + L ED ++IR
Sbjct: 414 GLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 461
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 75/137 (54%), Gaps = 4/137 (2%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD+ + N+M+ GY + V+ A R + V + +++ D LI GLC +GRT NA
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAERAVERD----AYTCDTLIRGLCGRGRTANALA 181
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ DEM R+ VP +Y L+ A ++ +K L EM +K D +TY V++ IC
Sbjct: 182 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 241
Query: 372 RRGRAGEAMKLLKELQN 388
+ GR +A++ LK L +
Sbjct: 242 QEGRVDDAIEFLKNLPS 258
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 16/268 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
+Y+I+ + L A+ +++ ++++ +M C + +N +I F + A+ V +
Sbjct: 267 SYNIVLKGLCTAERWEDAEELMGEM--GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 324
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
+ C P+ SYN L AF + K M+ MV+ G PDI S
Sbjct: 325 QIPK---YGCSPNSLSYNPLLHAFCKQKK--------MDKAMAFLDLMVSRGCYPDIVSY 373
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+++ S V+ A+ + HQ+ P SY+ +I GL G+TK A EL +EM
Sbjct: 374 NTLLTALCRSGEVDVAVELLHQLKD-KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 432
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG P +Y+++ + L +E+ ++ ++ + + + Y ++ +C+R
Sbjct: 433 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 492
Query: 378 EAMKLLK-ELQNKNLIDGYTYTKLLDVL 404
A+ L + N + + TYT L++ L
Sbjct: 493 SAIDLFAYMIGNGCMPNESTYTILIEGL 520
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 58/230 (25%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YN +++ F + +K+ +A+ M SR C P I SYN L TA G+
Sbjct: 338 YNPLLHAFCKQKKMDKAMAFLDLMV-SRG--CYPDIVSYNTLLTALCRSGEVDVAVELLH 394
Query: 227 --------------NTYINHVYM-----ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
NT I+ + E + L +MV+ G++PDI + +++ G
Sbjct: 395 QLKDKGCAPVLISYNTVIDGLTKAGKTKEALE-LLNEMVSKGLQPDIITYSTIAAGLCRE 453
Query: 268 NHVNDALRIF---HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ + DA+R F MG+ PN+ Y+ +I GLC + T +A +L M G +P+
Sbjct: 454 DRIEDAIRAFGKVQDMGI----RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 509
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+Y L+ LA G ++E R +LDE+C RG
Sbjct: 510 ESTYTILIEGLAYEGLIKEA-------------------RDLLDELCSRG 540
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P + +YN + + G+ ++ R + +E D ++ +++I+G
Sbjct: 124 CGPDVMAYNAMMAGYCGAGQ--------VDAAR---RWCAERAVERDAYTCDTLIRGLCG 172
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+AL + +M + +P+ +Y L+ C + K A +L DEM+ KG P
Sbjct: 173 RGRTANALAVLDEM-LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIV 231
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN +V+ + G V++ ++ L + + ++Y VL +C R +A +L+ E+
Sbjct: 232 TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 291
Query: 387 QNKN 390
K
Sbjct: 292 GQKG 295
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
++ + +++ALR+ V P++ + LI L A GRT AR +
Sbjct: 74 LRSLVRRGELDEALRL-----VGSARRPDAGTCAALIKKLSASGRTAEARRV-----LAA 123
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P +YN++++ G+V+ + W E+ D T T++ +C RGR A+
Sbjct: 124 CGPDVMAYNAMMAGYCGAGQVDAARR--W-CAERAVERDAYTCDTLIRGLCGRGRTANAL 180
Query: 381 KLLKE-LQNKNLIDGYTYTKLLD 402
+L E L+ + + D TYT LL+
Sbjct: 181 AVLDEMLRRRCVPDVVTYTILLE 203
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 156/363 (42%), Gaps = 59/363 (16%)
Query: 92 RC-AVSELPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGA 149
RC A+S+L F+++ + V+ L+ +P L F + SKQ FR + +Y + L
Sbjct: 55 RCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSR 114
Query: 150 AKMYQEMDDVVNQML------------------ATPSFCGTEALYNTIIYFFAEARKLSR 191
+MY E +NQ++ F + +++ I+ + E
Sbjct: 115 GRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKN 174
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC----------- 240
A+YVF M + PS+RS N L + G+ ++VY + IR
Sbjct: 175 ALYVFDNMGKCGRI---PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSI 231
Query: 241 ----------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMG 281
K+M N G+EP+I + +S+I GY+ V A L+ + G
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK-GFVPSSKSYNSLVSALALNGE 340
V N + +Y LI G C Q + A ++ M+ + VP ++Y L+ G+
Sbjct: 292 VSRNVV----TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
+++ V+ L EM+ + ++++ C+RG EA ++ + + NL D Y+Y
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407
Query: 400 LLD 402
LLD
Sbjct: 408 LLD 410
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 113/225 (50%), Gaps = 15/225 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I + + K+ A V + M+ L P R+Y +L + GK
Sbjct: 299 YTLLIKGYCKQCKMDEAEKVLRGMQEEAALV--PDERAYGVLIDGYCRTGKID------- 349
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +R L +M+ G++ ++F NS+I GY +++A + +M V +N P+S+SY+
Sbjct: 350 DAVR-LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM-VDWNLKPDSYSYNT 407
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C +G T A LCD+M ++G P+ +YN+L+ L G ++ ++ M+++
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 467
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKL 400
D + Y T+LD + + A L K++ L G+T +++
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDI----LARGFTKSRI 508
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ YNI GK ++ R F + G PD F+ ++I GY +
Sbjct: 712 PNNIVYNIAIAGLCKTGK--------VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+V++A R+ +M + +PN +Y+ LI+GLC A+ L ++ +KG P+ +Y
Sbjct: 764 NVDEAFRLRDEM-LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTY 822
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
N+L+ G ++ K +MIE+ +TY +++ +C+ G +MKLL ++
Sbjct: 823 NTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM 880
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P SYN L + G + + L +M+ +GIEP + + N+++KG
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFN--------LCDKMLQEGIEPTVLTYNTLLKGLCRV 450
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+DAL+I+H M + P+ Y L+ GL + A L ++ +GF S +
Sbjct: 451 GAFDDALQIWHLM-MKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 509
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
+N+++S L G++ E + +M + D ITYRT++D C+ G+A K+
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 564
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +M+ G+ P+I + N++I G S +V+ A R+FH++ PN +Y+ LI G
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ-KGLFPNVVTYNTLIDGY 829
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G A +L D+M +G PS +Y++L++ L +G++E ++K L +MI+
Sbjct: 830 CKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKL 889
Query: 361 ITYRTVLDEICRRGRAGEAMKL 382
I Y T++ R G + KL
Sbjct: 890 IEYCTLVQGYIRSGEMQKIHKL 911
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P+ N I G + V+DA R F + + ++P++F+Y LIHG A G A
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSL-KGFVPDNFTYCTLIHGYSAAGNVDEAFR 770
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L DEM R+G VP+ +YN+L++ L + V+ + ++ +K + +TY T++D C
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 830
Query: 372 RRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+ G A KL ++ + + TY+ L++ L
Sbjct: 831 KIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 106/260 (40%), Gaps = 43/260 (16%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN++I ++R+L + M R L P+I +Y L + G Y
Sbjct: 579 MYNSLISGLFKSRRLVEVTDLLTEM-GIRGLT--PNIVTYGALIDGWCKEGMLDKAFSSY 635
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNY----- 286
E M +G+ +I ++M+ G +++A + +M G ++
Sbjct: 636 FE--------MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 687
Query: 287 -----------------------LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
LPN+ Y+ I GLC G+ +AR + KGFVP
Sbjct: 688 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP 747
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ +Y +L+ + G V+E + EM+ + + +TY +++ +C+ A +L
Sbjct: 748 DNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLF 807
Query: 384 KELQNKNLI-DGYTYTKLLD 402
+L K L + TY L+D
Sbjct: 808 HKLHQKGLFPNVVTYNTLID 827
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+K ++ G + N+MI G + +A IF +M + P+ +Y
Sbjct: 489 EGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL-GCSPDGITYRT 547
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C A ++ M+R+ PS + YNSL+S L + + E L EM +
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 607
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ +TY ++D C+ G +A E+ L
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 99/267 (37%), Gaps = 45/267 (16%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
F + +NT+I + K+ A +F MK+ L C P +Y L + K
Sbjct: 502 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD---LGCSPDGITYRTLIDGYC---KA 555
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
+ + + + M + I P I NS+I G S + + + +MG+
Sbjct: 556 SNVGQAFK-----VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGI-RGLT 609
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN +Y LI G C +G A EM G + +++VS L G ++E
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669
Query: 348 LWEMIEK-------------------QRPVDF-------------ITYRTVLDEICRRGR 375
+ +M++ Q+ D I Y + +C+ G+
Sbjct: 670 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 729
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
+A + L K + D +TY L+
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLI 756
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 107/295 (36%), Gaps = 55/295 (18%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K+G +E+ D + + +P Y T+I + +A + +A V M+
Sbjct: 519 KMGKMVEAEEIFDKMKDLGCSPD----GITYRTLIDGYCKASNVGQAFKVKGAMERE--- 571
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
PSI YN L + + + L +M G+ P+I + ++I G+
Sbjct: 572 PISPSIEMYNSLISGLFKSRRLVEVTD--------LLTEMGIRGLTPNIVTYGALIDGWC 623
Query: 266 LSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
++ A + +M G+ N + S ++ GL GR A L +M GF
Sbjct: 624 KEGMLDKAFSSYFEMTENGLSANIIICS----TMVSGLYRLGRIDEANLLMQKMVDHGFF 679
Query: 323 PSSKS--------------------------------YNSLVSALALNGEVEETVKNLWE 350
P + YN ++ L G+V++ +
Sbjct: 680 PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 739
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+ K D TY T++ G EA +L E+ + L+ TY L++ L
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 41/274 (14%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF------------TAF 221
+Y +II + R++++A +F M + PSI +YN L TA
Sbjct: 209 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQG---ISPSIFTYNSLIHALCNLCEWKHVTAL 265
Query: 222 LSRGKNTYI--NHVYMETI---RC----------LFKQMVNDGIEPDIFSLNSMIKGYIL 266
L+ N+ I N V T+ C + M+ G+EP++ + N+++ G+ L
Sbjct: 266 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL 325
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ +++A+++F M V + P+ SY LI+G C R + A L +EM RK +P++
Sbjct: 326 RSEMDEAVKVFDTM-VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTV 384
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y++L+ L G +++ + EM+ + + DF++Y +LD +C+ R EA+ LLK +
Sbjct: 385 TYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI 444
Query: 387 QNKNL----------IDGYTYTKLLDVLEDDFGN 410
+ N+ IDG L+ D F N
Sbjct: 445 EGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSN 478
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 13/232 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+++T++ + K+ A V M R +E P++ +YN L R +
Sbjct: 279 VIFSTVVDALCKEGKVMEAHDVVDMMIK-RGVE--PNVVTYNALMDGHCLRSE------- 328
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
M+ +F MV G PD+ S +++I GY + A+ +F +M +PN+ +Y
Sbjct: 329 -MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEM-CRKELIPNTVTY 386
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
L+HGLC GR ++A L EM +G +P SY L+ L N ++E + L +
Sbjct: 387 STLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEG 446
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D Y V+D +CR G A L L +K L + +TYT +++ L
Sbjct: 447 SNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 498
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 10/215 (4%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L R + F + L +P+I ++N L GK + H LF +M+ +
Sbjct: 116 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLH--------LFDKMIGE 167
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G +P++ + ++I G + A+R+ M N P+ Y +I LC +
Sbjct: 168 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME-QGNCQPDVVVYTSIIDSLCKDRQVTQ 226
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L EM +G PS +YNSL+ AL E + L EM+ + + + + TV+D
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 286
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+C+ G+ EA ++ + + + + TY L+D
Sbjct: 287 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMD 321
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ L QM + GI P+I++LN +I + + A + ++ + + PN +++ L
Sbjct: 86 TVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKI-LKLGHQPNIATFNTL 144
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GLC +G+ L D+M +GF P+ +Y +L++ L G ++ L M +
Sbjct: 145 IRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNC 204
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
D + Y +++D +C+ + +A L E+ ++ + +TY L+ L
Sbjct: 205 QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHAL 253
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 15/256 (5%)
Query: 155 EMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
EMD+ V + F Y+T+I + + +++ +A+Y+F+ M E P+
Sbjct: 328 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRK---ELIPNTV 384
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+Y+ L G+ ++ LF +MV G PD S ++ + +++
Sbjct: 385 TYSTLMHGLCHVGR--------LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDE 436
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A+ + + N P+ Y +I G+C G + AR+L + KG P+ +Y ++
Sbjct: 437 AIALLKAIEG-SNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMI 495
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
+ L G + E K EM K + TY + R ++LL+E+ +
Sbjct: 496 NGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFS 555
Query: 392 IDGYTYTKLLDVLEDD 407
D T T L+++L DD
Sbjct: 556 ADVSTSTVLVEMLSDD 571
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++ + + R+L A+ + K ++ S N++ P I+ Y I+ G+ +
Sbjct: 421 YCILLDYLCKNRRLDEAIALLKAIEGS-NMD--PDIQIYTIVIDGMCRAGE--------L 469
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R LF + + G+ P++++ MI G + +A ++F +M Y PN +Y+
Sbjct: 470 EAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKR-KGYSPNGCTYNL 528
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ G T +L EM +GF + LV L+ +G ++++VK +
Sbjct: 529 ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG-LDQSVKQI 580
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 149/309 (48%), Gaps = 29/309 (9%)
Query: 100 PRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV 159
P ++ + +++ Q+ L+ F WAS P F H+ STY + KL + + ++ + +V
Sbjct: 90 PVPTHQHIAHLILEQKSASQALQTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEV 149
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYM-KNSRNLECRPSIRSYNILF 218
+++M ++ E+++ TI+ AR + + + V + K N PS++ +N +
Sbjct: 150 LDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGEN----PSLKIFNSIL 205
Query: 219 TAFLSRGKNTYINHVYMETIRCLF-KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+ ++ R + K+M+ +G+ D ++ ++KG L+N + DA ++
Sbjct: 206 DVLVKED---------IDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLL 256
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
M PN+ Y+ +IH LC G+ AR L +EM PS ++N L+SA
Sbjct: 257 QVMK-SRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQ 311
Query: 338 NGEVEETVKNLWEMIEKQRPVDF----ITYRTVLDEICRRGRAGEAMKLLKELQN-KNLI 392
EE + ++EK + F +T V+ +C+ GR E +++L+ +++ ++
Sbjct: 312 ----EENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVV 367
Query: 393 DGYTYTKLL 401
D Y L+
Sbjct: 368 DVVAYNTLI 376
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+ TY+I+ + M D+ N M T Y+T+I ++ +
Sbjct: 403 NVDTYNILASGYCDSGMLDSAIDLFNDM-KTDGINWNFMTYDTLIRGLCSGGRMEDGFKI 461
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV-YMETIRCLFKQMVNDGIEPDI 254
+ M+ SR I YN + KN + + ++ + LF + V+ +
Sbjct: 462 LELMEESRG-GAGGRISPYNSIIYGLYK--KNQFEEALEFLTKMEKLFPRAVDRSLR--- 515
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
I G+ + DA R++ QM + +P+ Y LIHG C G + A EL +
Sbjct: 516 ------ILGFCNEGSIGDAKRVYDQM-IKEGGVPSVLVYVCLIHGFCQDGNVREAFELIN 568
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM G+ P++ ++N+L+SA G+V +K + +M+ + D +Y ++D +C +G
Sbjct: 569 EMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKG 628
Query: 375 RAGEAMKLLKELQNKNLIDGYT 396
+A++L ++ K+++ Y+
Sbjct: 629 DFQKAVRLFLQMVEKDILPDYS 650
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 16/248 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE-ALYNTI 179
++LFN K + TY + R L + ++ ++ M + G + YN+I
Sbjct: 424 IDLFN-DMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSI 482
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
IY + + A+ +++ L R RS IL F + G VY
Sbjct: 483 IYGLYKKNQFEEAL---EFLTKMEKLFPRAVDRSLRIL--GFCNEGSIGDAKRVY----- 532
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
QM+ +G P + +I G+ +V +A + ++M V + Y P + +++ LI
Sbjct: 533 ---DQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEM-VDHGYFPTAPTFNALISA 588
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
C QG+ +A +L ++M +G +P SY+ +V AL G+ ++ V+ +M+EK D
Sbjct: 589 FCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPD 648
Query: 360 FITYRTVL 367
+ T+ ++L
Sbjct: 649 YSTWNSML 656
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 108/245 (44%), Gaps = 41/245 (16%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YNT+I+ + K+ RA ++ N PS ++N+L +A+ +N V
Sbjct: 269 VIYNTMIHALCKNGKVGRA-------RSLMNEMVEPSDVTFNVLISAYCQE-ENLVQALV 320
Query: 234 YME----------------TIRCLFKQ-MVNDGIEP-----------DIFSLNSMIKGYI 265
+E + L K V +G+E D+ + N++IKG+
Sbjct: 321 LLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFC 380
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ R+ M + LPN +Y+ L G C G +A +L ++MK G +
Sbjct: 381 MLGKAKVGHRVLKDM-EIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNF 439
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD---FITYRTVLDEICRRGRAGEAMKL 382
+Y++L+ L G +E+ K L E++E+ R Y +++ + ++ + EA++
Sbjct: 440 MTYDTLIRGLCSGGRMEDGFKIL-ELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEF 498
Query: 383 LKELQ 387
L +++
Sbjct: 499 LTKME 503
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 104/195 (53%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +++ L AF+ GK +Y E M+ I+PDIF+ +S+I G+ + +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDE--------MIKRSIDPDIFTYSSLINGFCMHD 374
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A +F M + + PN +Y+ LI G C R + EL EM ++G V ++ +Y
Sbjct: 375 RLDEAKHMFELM-ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+ L G+ + K +M+ P D ITY +LD +C+ G+ +A+ + + LQ
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 389 KNL-IDGYTYTKLLD 402
+ D YTY +++
Sbjct: 494 SKMEPDIYTYNIMIE 508
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 116/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A+ +K + + + M +NL + SYNIL F R + +
Sbjct: 83 FNKLLSAIAKMKKFDLVISLGERM---QNLRISYDLYSYNILINCFCRRSQ--------L 131
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +M+ G EPDI +L+S++ GY S ++DA+ + QM V Y P++ +++
Sbjct: 132 PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM-VEMGYKPDTVTFNT 190
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL + A L D+M ++G P +Y ++V+ L G+++ + L +M + +
Sbjct: 191 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D + Y T++D +C+ +A L +++ K + D +TY L+ L
Sbjct: 251 IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 13/218 (5%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL A+ +F M SR L PSI +N L +A K + + L ++M N
Sbjct: 60 KLDDAIGLFGEMVQSRPL---PSIVEFNKLLSAIAKMKK--------FDLVISLGERMQN 108
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
I D++S N +I + + + AL + +M + Y P+ + L++G C R
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKM-MKLGYEPDIVTLSSLLNGYCHSKRIS 167
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A L D+M G+ P + ++N+L+ L L+ + E V + +M+++ D +TY V+
Sbjct: 168 DAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVV 227
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +C+RG A+ LLK+++ + D Y ++D L
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 265
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 12/215 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I+ K S AV + M C+P + +Y + RG +
Sbjct: 188 FNTLIHGLFLHNKASEAVALVDQMVQR---GCQPDLVTYGAVVNGLCKRGD--------I 236
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L K+M IE D+ N++I G H++DA +F++M P+ F+Y+
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMET-KGIRPDVFTYNS 295
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI LC GR +A L M + P+ ++++L+ A G++ E K EMI++
Sbjct: 296 LISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
D TY ++++ C R EA + + + +K+
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 25/238 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F +A+++ + +F+ M + R L + +YN L G
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREM-SQRGL--VGNTVTYNTLIQGLFQAGD--------C 446
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL------PN 289
+ + +FK+MV+DG+ PDI + + ++ G + AL VV+ YL P+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL-------VVFEYLQKSKMEPD 499
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
++Y+ +I G+C G+ ++ +L + KG P+ Y +++S G EE
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
EM E D Y T++ R G + +L+KE+++ + D T + ++++L D
Sbjct: 560 EMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 46/262 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F +L A+ V M L P I + + L N Y + +
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKM---MKLGYEPDIVTLSSLL--------NGYCHSKRI 166
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------------GVV 283
L QMV G +PD + N++I G L N ++A+ + QM G V
Sbjct: 167 SDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAV 226
Query: 284 YNYL----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
N L + Y+ +I GLC +A L ++M+ KG
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGI 286
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P +YNSL+S L G + + L MIE++ + +T+ ++D + G+ EA K
Sbjct: 287 RPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 382 LLKELQNKNL-IDGYTYTKLLD 402
L E+ +++ D +TY+ L++
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLIN 368
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 156/363 (42%), Gaps = 59/363 (16%)
Query: 92 RC-AVSELPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGA 149
RC A+S+L F+++ + V+ L+ +P L F + SKQ FR + +Y + L
Sbjct: 55 RCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSR 114
Query: 150 AKMYQEMDDVVNQML------------------ATPSFCGTEALYNTIIYFFAEARKLSR 191
+MY E +NQ++ F + +++ I+ + E
Sbjct: 115 GRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKN 174
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC----------- 240
A+YVF M + PS+RS N L + G+ ++VY + IR
Sbjct: 175 ALYVFDNMGKCGRI---PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSI 231
Query: 241 ----------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMG 281
K+M N G+EP+I + +S+I GY+ V A L+ + G
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK-GFVPSSKSYNSLVSALALNGE 340
V N + +Y LI G C Q + A ++ M+ + VP ++Y L+ G+
Sbjct: 292 VSRNVV----TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
+++ V+ L EM+ + ++++ C+RG EA ++ + + NL D Y+Y
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407
Query: 400 LLD 402
LLD
Sbjct: 408 LLD 410
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 15/225 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I + + K+ A V + M+ L P R+Y +L + GK
Sbjct: 299 YTLLIKGYCKQCKMDEAEKVLRGMQEEAAL--VPDERAYGVLIDGYCRTGKID------- 349
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +R L +M+ G++ ++F NS+I GY +++A + +M V +N P+S+SY+
Sbjct: 350 DAVR-LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM-VDWNLKPDSYSYNT 407
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C +G T A LCD+M ++G P+ +YN+L+ L G ++ ++ M++
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXG 467
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKL 400
D + Y T+LD + + A L K++ L G+T +++
Sbjct: 468 VAPDEVGYSTLLDGLFKMENFEGASTLWKDI----LARGFTKSRI 508
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ YNI GK ++ R F + G PD F+ ++I GY +
Sbjct: 712 PNNIVYNIAIAGLCKTGK--------VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+V++A R+ +M + +PN +Y+ LI+GLC A+ L ++ +KG P+ +Y
Sbjct: 764 NVDEAFRLRDEM-LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTY 822
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
N+L+ G ++ K +MIE+ +TY +++ +C+ G +MKLL ++
Sbjct: 823 NTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM 880
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P SYN L + G + + L +M+ +GIEP + + N+++KG
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFN--------LCDKMLQEGIEPTVLTYNTLLKGLCRV 450
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+DAL+I+H M + P+ Y L+ GL + A L ++ +GF S +
Sbjct: 451 GAFDDALQIWHLM-MKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 509
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+N+++S L G++ E + +M + D ITYRT++D C+ G+A K+ ++
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569
Query: 388 NKNL 391
+ +
Sbjct: 570 REXI 573
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P+ N I G + V+DA R F + + ++P++F+Y LIHG A G A
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSL-KGFVPDNFTYCTLIHGYSAAGNVDEAFR 770
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L DEM R+G VP+ +YN+L++ L + V+ + ++ +K + +TY T++D C
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 830
Query: 372 RRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+ G A KL ++ + + TY+ L++ L
Sbjct: 831 KIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +M+ G+ P+I + N++I G S +V+ A R+FH++ PN +Y+ LI G
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ-KGLFPNVVTYNTLIDGY 829
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G A +L D+M +G PS +Y++L++ L +G++E ++K L +MI+
Sbjct: 830 CKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKL 889
Query: 361 ITYRTVL 367
I Y T++
Sbjct: 890 IEYCTLV 896
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 106/260 (40%), Gaps = 43/260 (16%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN++I ++R+L + M R L P+I +Y L + G Y
Sbjct: 579 MYNSLISGLFKSRRLVEXTDLLTEM-GIRGLT--PNIVTYGALIDGWCKEGMLDKAFSSY 635
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNY----- 286
E M +G+ +I ++M+ G +++A + +M G ++
Sbjct: 636 FE--------MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 687
Query: 287 -----------------------LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
LPN+ Y+ I GLC G+ +AR + KGFVP
Sbjct: 688 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP 747
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ +Y +L+ + G V+E + EM+ + + +TY +++ +C+ A +L
Sbjct: 748 DNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLF 807
Query: 384 KELQNKNLI-DGYTYTKLLD 402
+L K L + TY L+D
Sbjct: 808 HKLHQKGLFPNVVTYNTLID 827
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+K ++ G + N+MI G + +A IF +M + P+ +Y
Sbjct: 489 EGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL-GCSPDGITYRT 547
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C A ++ M+R+ PS + YNSL+S L + + E L EM +
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG 607
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ +TY ++D C+ G +A E+ L
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 99/267 (37%), Gaps = 45/267 (16%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
F + +NT+I + K+ A +F MK+ L C P +Y L + K
Sbjct: 502 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD---LGCSPDGITYRTLIDGYC---KA 555
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
+ + + + M + I P I NS+I G S + + + +MG+
Sbjct: 556 SNVGQAFK-----VKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGI-RGLT 609
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN +Y LI G C +G A EM G + +++VS L G ++E
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669
Query: 348 LWEMIEK-------------------QRPVDF-------------ITYRTVLDEICRRGR 375
+ +M++ Q+ D I Y + +C+ G+
Sbjct: 670 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 729
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
+A + L K + D +TY L+
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLI 756
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 123/257 (47%), Gaps = 32/257 (12%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+Y T+I+ + R+ ++A +F M P+I + N L A + G+ ++N +
Sbjct: 215 VVYGTLIHSLCKDRQQTQAFNLFSEMITKG---ISPNIVTCNSLVYALCNLGEWKHVNTL 271
Query: 234 YMETIRC---------------------------LFKQMVNDGIEPDIFSLNSMIKGYIL 266
E + + M G+EPD+ + ++I G+ L
Sbjct: 272 LNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCL 331
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ +++A+++F M V PN FSY+ LI+G C R A L +EM R+ +P++
Sbjct: 332 RSEMDEAVKVFDMM-VHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTV 390
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN+L+ L G +++ + EM+ + D +TYR +LD +C+ +AM LLK +
Sbjct: 391 TYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAI 450
Query: 387 QNKNL-IDGYTYTKLLD 402
+ NL D YT ++D
Sbjct: 451 EGSNLDPDIQIYTIVID 467
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 10/215 (4%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L+R + F + L C+P S+ L G+ H LF +M+ +
Sbjct: 122 LNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALH--------LFDKMIWE 173
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G +PD+ ++I G + H + A+R+ M N P+ Y LIH LC +
Sbjct: 174 GFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEK-GNCQPDVVVYGTLIHSLCKDRQQTQ 232
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L EM KG P+ + NSLV AL GE + L EM++ + + I+ TV+D
Sbjct: 233 AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVD 292
Query: 369 EICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLD 402
+C+ G +A ++ + Q+ D TYT L+D
Sbjct: 293 ALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALID 327
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 18/281 (6%)
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEAR 187
Q D TY T + + EMD+ V M+ YNT+I + +
Sbjct: 312 QSGVEPDVVTY---TALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIE 368
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
++ +A+Y+F+ M + + P+ +YN L G+ ++ LF++MV
Sbjct: 369 RMDKAMYLFEEMCRQKLI---PNTVTYNTLIHGLCHVGR--------LQDAIALFREMVA 417
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G PD+ + ++ + H++ A+ + + N P+ Y +I G+C G +
Sbjct: 418 CGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEG-SNLDPDIQIYTIVIDGMCRAGELE 476
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+AR+L + KG P+ +YN + L G ++E K EM E D TY T+
Sbjct: 477 DARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTIT 536
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
R A++LL+E+ + D T T L+ +L DD
Sbjct: 537 QGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDD 577
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ L ++M + GI ++++LN +I + N VN A + ++ + P++ S+ L
Sbjct: 92 TVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKI-LKLGCQPDTASFTTL 150
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GLC +G+ A L D+M +GF P Y +L++ L G ++ L M +
Sbjct: 151 IKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNC 210
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D + Y T++ +C+ + +A L E+ K +
Sbjct: 211 QPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGI 245
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 20/237 (8%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT---EALYNTI 179
LF +Q + + TY+ + L Q+ + +M+A CG Y +
Sbjct: 376 LFEEMCRQ-KLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVA----CGQIPDLVTYRIL 430
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ + + L +A+ + K ++ S NL+ P I+ Y I+ G+ +E R
Sbjct: 431 LDYLCKNCHLDKAMALLKAIEGS-NLD--PDIQIYTIVIDGMCRAGE--------LEDAR 479
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
LF + + G++P++++ N M G +++A ++F +M + +Y+ + G
Sbjct: 480 DLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDE-NACSADGCTYNTITQG 538
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
T A +L +EM +GF + LV L+ +G + L +M R
Sbjct: 539 FLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLR 595
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 119/259 (45%), Gaps = 24/259 (9%)
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
G KMY+ D ++ +M A C E +N +I F + +S A+ VF M
Sbjct: 192 GLVKMYKA-DAILKEMKAD-GICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQ---GV 246
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ +YN L + GK +N T+R QMVN +EP+I + N+++ G+ +
Sbjct: 247 KPNVVTYNSLINGLCNNGK---VNEA--TTLR---DQMVNSCLEPNIITHNALLNGFCKN 298
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V A +F M PN +Y+ LI C ++A L M KG P +
Sbjct: 299 KMVKQAGELFEDMPK-QRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVST 357
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN L+ L G++E + EM K D ITY ++D +C +G + ++LL E+
Sbjct: 358 YNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMC 417
Query: 388 NKNL----------IDGYT 396
K L IDGY+
Sbjct: 418 KKGLKPSQLTYNTMIDGYS 436
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 137/314 (43%), Gaps = 41/314 (13%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE----MDDVVNQMLA 165
++T D + L F W+ K+ + H M L AK Y + +D+ V
Sbjct: 68 LLTSGADSDLTLRYFTWSQKELKLSHSLELTFRMLHSLAYAKKYSKIRSFLDNCVQNDKN 127
Query: 166 TP-------------SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
P SFC + + +++ A+A+ L + F+ K + + + S+
Sbjct: 128 YPVSFIFHAISVSGDSFCANSIIVDILVW--ADAKNL-KTRLGFEAFKRASDYGLKLSVT 184
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
S N L + V M + K+M DGI P+ + N +I G+ +V+
Sbjct: 185 SCNPLMSGL-----------VKMYKADAILKEMKADGICPNEVTFNILIDGFCNDKNVSV 233
Query: 273 ALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
A+++F +M GV PN +Y+ LI+GLC G+ A L D+M P+ ++N
Sbjct: 234 AMKVFAEMNRQGVK----PNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHN 289
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPV-DFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L++ N V++ L+E + KQR + TY ++D C+ +A L + +
Sbjct: 290 ALLNGFCKNKMVKQA-GELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLG 348
Query: 389 KNLI-DGYTYTKLL 401
K + D TY L+
Sbjct: 349 KGVYPDVSTYNCLI 362
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 140/302 (46%), Gaps = 18/302 (5%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA 165
+LC ++ L D LE+F Q + H Y++ KLGA ++ +D ++ QM
Sbjct: 81 QLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQM-K 139
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
E+++ I+ + +A + +A+ + M+ C P+ +SY+++ ++
Sbjct: 140 EEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVY--LCEPTFKSYDLVLEILVTGN 197
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+V F M++ G+ P +F+ ++K + N V+ A + M +
Sbjct: 198 CPQVATNV--------FYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDM-TKHG 248
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+PNS Y LIH L + + A +L +EM G +P +++N ++ L ++ +
Sbjct: 249 CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDAT 308
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN------LIDGYTYTK 399
K + M+ + D +TY +L +CR G+ EA K+L ++ N LI+GY +
Sbjct: 309 KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSG 368
Query: 400 LL 401
L
Sbjct: 369 QL 370
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P+ LN++I GY++S + +A ++ + + + P+ F+Y+ L+HGLC +G AR+
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L +EM R+G P+ +Y LV+ L G +EE L EM + ++ + Y ++ +C
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
R+ + A+ LL E+ K D +TY L+
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSR 191
F+ D TY+I+ L D+VN+M + C + Y ++ +A L
Sbjct: 386 FQPDIFTYNILMHGLCKEGSLSFARDLVNEM--SRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A V M ++R L I YN L A + K HV + L +M G +
Sbjct: 444 AGLVLHEM-SARGLTINSVI--YNCLICALCRKEKV----HVALN----LLSEMCTKGCK 492
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNYLPNSF------------ 291
PD+F+ NS+I G + +++A R+FH M V YN L ++
Sbjct: 493 PDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTL 552
Query: 292 --------------SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+Y+ LI C G + EL ++M G + S N +++ L
Sbjct: 553 VNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYT 396
G+V+ + L + I + D +TY +VL+ +C+ GR EA+ L LQ + + D +T
Sbjct: 613 VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFT 672
Query: 397 YTKLL 401
Y +
Sbjct: 673 YNTFI 677
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 227 NTYINHVYM-----ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
NT IN M E L + M+N G +PDIF+ N ++ G ++ A + ++M
Sbjct: 358 NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
PN +Y L++GLC G + A + EM +G +S YN L+ AL +V
Sbjct: 418 R-RGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-----YT 396
+ L EM K D TY +++ +C+ R EA +L + L+DG T
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM----LLDGAVANNVT 532
Query: 397 YTKLLDVL 404
Y L+ L
Sbjct: 533 YNTLIHAL 540
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 109/259 (42%), Gaps = 48/259 (18%)
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
C A+ NT+I + + +L A + N +P I +YNIL G ++
Sbjct: 351 CPNNAILNTLINGYVMSGQLKEAQSFLN--ETMINFGFQPDIFTYNILMHGLCKEGSLSF 408
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG-------- 281
R L +M G EP++ + ++ G + + +A + H+M
Sbjct: 409 A--------RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINS 460
Query: 282 VVYNYL--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDE 315
V+YN L P+ F+Y+ LI+GLC R A L
Sbjct: 461 VIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHN 520
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G V ++ +YN+L+ AL G ++ + + +M+ + +D ITY ++ C+ G
Sbjct: 521 MLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGN 580
Query: 376 AGEAMKLLKELQNKNLIDG 394
+ ++L +++ ++DG
Sbjct: 581 IEKGLELYEQM----IMDG 595
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I+ +A+ + M C +YN L AF G +
Sbjct: 533 YNTLIHALLRRGAFQKALTLVNDMLFRG---CTLDKITYNGLIKAFCKVGN--------I 581
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L++QM+ DG+ D S N MI G V++A F + + ++P+ +Y+
Sbjct: 582 EKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFE-FLRDAINRGFVPDIVTYNS 640
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+++GLC GR K A L D ++ +G P + +YN+ +S G V + + IE
Sbjct: 641 VLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIE 698
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 104/195 (53%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +++ L AF+ GK +Y E M+ I+PDIF+ +S+I G+ + +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDE--------MIKRSIDPDIFTYSSLINGFCMHD 374
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A +F M + + PN +Y+ LI G C R + EL EM ++G V ++ +Y
Sbjct: 375 RLDEAKHMFELM-ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+ L G+ + K +M+ P D ITY +LD +C+ G+ +A+ + + LQ
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 389 KNL-IDGYTYTKLLD 402
+ D YTY +++
Sbjct: 494 SKMEPDIYTYNIMIE 508
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 21/276 (7%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLG-AAKMYQEMDDVVNQMLATPSFCGTEAL 175
PL L +++ +R S ++ KL A ++ EM Q PS
Sbjct: 31 PLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEM----VQSRPLPSIVE---- 82
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A+ K + + + M+N L + SYNIL F R + +
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQN---LRISYDLYSYNILINCFCRRSQ--------L 131
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +M+ G EPDI +L+S++ GY +++A+ + QM V Y PN+ +++
Sbjct: 132 PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM-FVMEYQPNTVTFNT 190
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL + A L D M +G P +Y ++V+ L G+++ + L +M + +
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D + Y T++D +C +A+ L E+ NK +
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 25/238 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F +A+++ + +F+ M + R L + +YN L G
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREM-SQRGL--VGNTVTYNTLIQGLFQAGD--------C 446
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL------PN 289
+ + +FK+MV+DG+ PDI + + ++ G + AL VV+ YL P+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL-------VVFEYLQKSKMEPD 499
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
++Y+ +I G+C G+ ++ +L + KG P+ Y +++S G EE
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
EM E + TY T++ R G + +L+KE+++ + D T + ++++L D
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 125/256 (48%), Gaps = 23/256 (8%)
Query: 156 MDDVV---NQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
+DD V NQM+ TP+ ++N+++Y K + +F M N RP
Sbjct: 556 VDDAVLQFNQMINEGVTPN----NVVFNSLVYGLCTVDKWEKVEELFLEMLNQ---GIRP 608
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
I +N + G+ ME R L MV G++PD+ S N++I G+ ++
Sbjct: 609 DIVFFNTVLCNLCKEGR-------VMEARR-LIDSMVCMGLKPDVISYNTLIDGHCFASR 660
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+++A+++ M V PN SY+ L+HG C GR NA L EM RKG P ++YN
Sbjct: 661 MDEAVKLLDGM-VSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYN 719
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
++++ L +G E + MI+ ++ TY +LD C+ EA K+ + L +
Sbjct: 720 TILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSM 779
Query: 390 NL-IDGYTYTKLLDVL 404
+L +D T+ ++D L
Sbjct: 780 DLQLDIITFNIMIDGL 795
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 13/256 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + L A+ +DV QM+ YNTII +A+++ A V
Sbjct: 224 DVVTYNTIIDGLCKAQEVDRAEDVFQQMV-EKGVKPNNVTYNTIIDGLCKAQEVDMAEGV 282
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ M + +PS +YN + ++ +F+QM++ G++PD
Sbjct: 283 FQKMVDK---GVKPSNVTYNTIIDGLCKAQA--------VDRAEGVFQQMIDRGVKPDHV 331
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N++I G + ++ A +F QM + P++ +Y +I GLC A + +
Sbjct: 332 TYNTIIDGLCKAQAIDKAEGVFQQM-IDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQ 390
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M KG P++ +YN L+ G+ EE V+ + EM D TY +LD +C+ G+
Sbjct: 391 MIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGK 450
Query: 376 AGEAMKLLKELQNKNL 391
EA L + K +
Sbjct: 451 CNEARSLFDSMIRKGI 466
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 111/237 (46%), Gaps = 20/237 (8%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+ + N ++ + +++ A++V ++ + CR + SYN L R +
Sbjct: 119 DIVVNQLLKGLCDTKRVGEAMHVL--LRQMPEVGCRLGVVSYNTLLKGLCDRRR------ 170
Query: 233 VYMETIRCLFKQMVNDGIE----PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
E R L MV DG + PD+ S N +I G+ V+ A +F +MGV P
Sbjct: 171 --AEEARELLHMMV-DGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVS----P 223
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ +Y+ +I GLC A ++ +M KG P++ +YN+++ L EV+
Sbjct: 224 DVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVF 283
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+M++K +TY T++D +C+ A + +++ ++ + D TY ++D L
Sbjct: 284 QKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGL 340
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 122/313 (38%), Gaps = 56/313 (17%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ D TY I+ L A+ + V QM+ YN +I+ + + V
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMI-DKGVKPNNGTYNCLIHGYLSTGQWEEVV 420
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
K M ++ +LE P + +Y +L GK R LF M+ GI+P
Sbjct: 421 QRIKEM-SAHDLE--PDVFTYGLLLDYLCKNGK--------CNEARSLFDSMIRKGIKPS 469
Query: 254 IFSLNSMIKGY---------------ILSNHVNDALRIFHQMGVVY-------------- 284
+ M+ GY +++N ++ RIF+ + Y
Sbjct: 470 VTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFI 529
Query: 285 -----NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
PN +Y LI LC GR +A ++M +G P++ +NSLV L
Sbjct: 530 KMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVD 589
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL----------QNK 389
+ E+ + EM+ + D + + TVL +C+ GR EA +L+ +
Sbjct: 590 KWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYN 649
Query: 390 NLIDGYTYTKLLD 402
LIDG+ + +D
Sbjct: 650 TLIDGHCFASRMD 662
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 105/251 (41%), Gaps = 47/251 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I A ++ AV + M ++ +P+I SYN L + G+ I++ Y
Sbjct: 648 YNTLIDGHCFASRMDEAVKLLDGMVSA---GLKPNIVSYNTLLHGYCKAGR---IDNAY- 700
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL 287
CLF++M+ G+ P + + N+++ G S ++A ++ M Y+ +
Sbjct: 701 ----CLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSII 756
Query: 288 PNSF--------------------------SYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+ F +++ +I GL GR ++A +L + G
Sbjct: 757 LDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGL 816
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV-DFITYRTVLDEICRRGRAGEAM 380
VPS +Y + L G +EE + L+ ++EK + ++ ++ RG A
Sbjct: 817 VPSVVTYRLIAENLIEEGSLEE-LDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAG 875
Query: 381 KLLKELQNKNL 391
L +L KN
Sbjct: 876 AYLSKLDEKNF 886
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 22/288 (7%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARK 188
R D TY I+ Y++ ++++M TP YN ++ + +
Sbjct: 188 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDI----VTYNVVVNGICQEGR 243
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ A+ +++KN + C P+ SYNI+ + + E L +M
Sbjct: 244 VDDAI---EFLKNLPSYGCEPNTVSYNIVLKGLCTAER--------WEDAEELMGEMGQK 292
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G P++ + N +I V AL + Q+ Y PNS SY+ L+H C Q +
Sbjct: 293 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQI-PKYGCTPNSLSYNPLLHAFCKQKKMDK 351
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A D M +G P SYN+L++AL +GEV+ V+ L ++ +K I+Y TV+D
Sbjct: 352 AMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 411
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFGNSIR 413
+ + G+ EA++LL E+ +K L D TY+ + L ED ++IR
Sbjct: 412 GLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 459
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD+ + N+M+ GY + ++ A R+ +M V P++++Y+ LI GLC +GRT NA
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMPVE----PDAYTYNTLIRGLCGRGRTANALA 179
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ DEM R+ VP +Y L+ A ++ +K L EM +K D +TY V++ IC
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239
Query: 372 RRGRAGEAMKLLKELQN 388
+ GR +A++ LK L +
Sbjct: 240 QEGRVDDAIEFLKNLPS 256
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 16/268 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
+Y+I+ + L A+ +++ ++++ +M C + +N +I F + A+ V +
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEM--GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 322
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
+ C P+ SYN L AF + K M+ MV+ G PDI S
Sbjct: 323 QIPK---YGCTPNSLSYNPLLHAFCKQKK--------MDKAMAFLDLMVSRGCYPDIVSY 371
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+++ S V+ A+ + HQ+ P SY+ +I GL G+TK A EL +EM
Sbjct: 372 NTLLTALCRSGEVDVAVELLHQLKD-KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 430
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG P +Y+++ + L +E+ ++ ++ + + + Y ++ +C+R
Sbjct: 431 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 490
Query: 378 EAMKLLK-ELQNKNLIDGYTYTKLLDVL 404
A+ L + N + + TYT L++ L
Sbjct: 491 SAIDLFAYMIGNGCMPNESTYTILIEGL 518
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 12/184 (6%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P + +YN + + G+ ++ R L +M +EPD ++ N++I+G
Sbjct: 122 CGPDVMAYNAMVAGYCGAGQ--------LDAARRLVAEMP---VEPDAYTYNTLIRGLCG 170
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+AL + +M + +P+ +Y L+ C + K A +L DEM+ KG P
Sbjct: 171 RGRTANALAVLDEM-LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIV 229
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN +V+ + G V++ ++ L + + ++Y VL +C R +A +L+ E+
Sbjct: 230 TYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 289
Query: 387 QNKN 390
K
Sbjct: 290 GQKG 293
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +++ F + +K+ +A+ M SR C P I SYN L TA G+ V +
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMV-SRG--CYPDIVSYNTLLTALCRSGEV----DVAV 388
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L Q+ + G P + S N++I G + +AL + ++M V P+ +Y
Sbjct: 389 E----LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM-VSKGLQPDIITYST 443
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+ GLC + R ++A +++ G P++ YN+++ L E + MI
Sbjct: 444 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 503
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ TY +++ + G EA LL EL ++ ++
Sbjct: 504 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P++ + LI L A GRT AR + P +YN++V+ G+++ +
Sbjct: 94 PDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMVAGYCGAGQLDAARRL 148
Query: 348 LWEMIEKQRPV--DFITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLD 402
+ EM PV D TY T++ +C RGR A+ +L E L+ + + D TYT LL+
Sbjct: 149 VAEM-----PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLE 201
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 128/275 (46%), Gaps = 20/275 (7%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ D Y+ + L K+ + DV ++M+ Y T+I+ F L A
Sbjct: 194 KPDVVMYNTIINSLCKNKLLGDACDVYSEMIVK-GISPDVVTYTTLIHGFCIMGHLKEAF 252
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ MK +N+ P++ ++NIL A GK M+ + L M+ I+PD
Sbjct: 253 SLLNEMK-LKNI--NPNVCTFNILIDALSKEGK--------MKEAKILLAVMMKACIKPD 301
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+F+ NS+I GY L + V A +F+ M GV P+ Y +I+GLC A
Sbjct: 302 VFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVT----PDVQCYTNMINGLCKTKMVDEAM 357
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
L +EMK K +P +YNSL+ L N +E + M E+ D +Y +LD +
Sbjct: 358 SLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGL 417
Query: 371 CRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
C+ GR +A ++ + L K ++ + YT L++ L
Sbjct: 418 CKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRL 452
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 8/192 (4%)
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
++ +N+ + T+ LFKQ +GI PD+ +L+ +I + H+ A +F + + +
Sbjct: 65 SSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANI-LKRGF 123
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
PN+ + + LI GLC +G K A D++ +GF SY +L++ L GE + +
Sbjct: 124 HPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVAR 183
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLE 405
L ++ D + Y T+++ +C+ G+A + E+ K + D TYT L+
Sbjct: 184 LLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIH--- 240
Query: 406 DDFGNSIRHHLR 417
G I HL+
Sbjct: 241 ---GFCIMGHLK 249
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
N + + ++ +F ++ G P+ +LN++IKG + AL FH V +
Sbjct: 100 NCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALY-FHDQLVAQGF 158
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ SY LI+GLC G TK L +++ P YN+++++L N + +
Sbjct: 159 QLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACD 218
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVLE 405
EMI K D +TY T++ C G EA LL E++ KN+ T+ L+D L
Sbjct: 219 VYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALS 278
Query: 406 DD 407
+
Sbjct: 279 KE 280
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 23/241 (9%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
TP C L N F ++ A VF N P+ + N L RG
Sbjct: 89 TPDLCTLSILINC----FCHQAHITLAFSVFA---NILKRGFHPNAITLNTLIKGLCFRG 141
Query: 226 KNTYINHVYMETIRCLF--KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
E + L+ Q+V G + D S ++I G + R+ ++
Sbjct: 142 ----------EIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEG- 190
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
++ P+ Y+ +I+ LC +A ++ EM KG P +Y +L+ + G ++E
Sbjct: 191 HSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKE 250
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLL 401
L EM K + T+ ++D + + G+ EA K+L + K I D +TY L+
Sbjct: 251 AFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEA-KILLAVMMKACIKPDVFTYNSLI 309
Query: 402 D 402
D
Sbjct: 310 D 310
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY-----LIHGLCAQGRT 306
P F N+++ + + H + +F Q + PN + D LI+ C Q
Sbjct: 55 PPTFHFNNILSSLVNNKHYPTVISLFKQ------FEPNGITPDLCTLSILINCFCHQAHI 108
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
A + + ++GF P++ + N+L+ L GE+++ + +++ + +D ++Y T+
Sbjct: 109 TLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTL 168
Query: 367 LDEICRRGRAGEAMKLLKELQNKNL 391
++ +C+ G +LL++L+ ++
Sbjct: 169 INGLCKTGETKAVARLLRKLEGHSV 193
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 140/302 (46%), Gaps = 18/302 (5%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA 165
+LC ++ L D LE+F Q + H Y++ KLGA ++ +D ++ QM
Sbjct: 81 QLCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQM-K 139
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
E+++ I+ + +A + +A+ + M+ C P+ +SY+++ ++
Sbjct: 140 EEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVY--LCEPTFKSYDLVLEILVTGN 197
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+V F M++ G+ P +F+ ++K + N V+ A + M +
Sbjct: 198 CPQVATNV--------FYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDM-TKHG 248
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+PNS Y LIH L + + A +L +EM G +P +++N ++ L ++ +
Sbjct: 249 CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDAT 308
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN------LIDGYTYTK 399
K + M+ + D +TY +L +CR G+ EA K+L ++ N LI+GY +
Sbjct: 309 KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSG 368
Query: 400 LL 401
L
Sbjct: 369 QL 370
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P+ LN++I GY++S + +A ++ + + + P+ F+Y+ L+HGLC +G AR+
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L +EM R+G P+ +Y LV+ L G +EE L EM + ++ + Y ++ +C
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALC 471
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
R+ + A+ LL E+ K D +TY L+
Sbjct: 472 RKEKVHVALNLLSEMCTKGCKPDLFTYNSLI 502
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 128/305 (41%), Gaps = 49/305 (16%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSR 191
F+ D TY+I+ L D+VN+M + C + Y ++ +A L
Sbjct: 386 FQPDIFTYNILMHGLCKEGSLSFARDLVNEM--SRRGCEPNVITYAILVNGLCKAGLLEE 443
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A V M ++R L I YN L A + K HV + L +M G +
Sbjct: 444 AGLVLHEM-SARGLTINSVI--YNCLICALCRKEKV----HVALN----LLSEMCTKGCK 492
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNYLPNSF------------ 291
PD+F+ NS+I G + +++A R+FH M V YN L ++
Sbjct: 493 PDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTL 552
Query: 292 --------------SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+Y+ LI C G + EL ++M G + S N +++ L
Sbjct: 553 VNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYT 396
G+V+ + L + I + D +TY +VL+ +C+ GR EA+ L LQ + + D +T
Sbjct: 613 VGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFT 672
Query: 397 YTKLL 401
Y +
Sbjct: 673 YNTFI 677
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 227 NTYINHVYM-----ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
NT IN M E L + M+N G +PDIF+ N ++ G ++ A + ++M
Sbjct: 358 NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
PN +Y L++GLC G + A + EM +G +S YN L+ AL +V
Sbjct: 418 R-RGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKV 476
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-----YT 396
+ L EM K D TY +++ +C+ R EA +L + L+DG T
Sbjct: 477 HVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM----LLDGAVANNVT 532
Query: 397 YTKLLDVL 404
Y L+ L
Sbjct: 533 YNTLIHAL 540
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 109/259 (42%), Gaps = 48/259 (18%)
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
C A+ NT+I + + +L A + N +P I +YNIL G ++
Sbjct: 351 CPNNAILNTLINGYVMSGQLKEAQSFLN--ETMINFGFQPDIFTYNILMHGLCKEGSLSF 408
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG-------- 281
R L +M G EP++ + ++ G + + +A + H+M
Sbjct: 409 A--------RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINS 460
Query: 282 VVYNYL--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDE 315
V+YN L P+ F+Y+ LI+GLC R A L
Sbjct: 461 VIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHN 520
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G V ++ +YN+L+ AL G ++ + + +M+ + +D ITY ++ C+ G
Sbjct: 521 MLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGN 580
Query: 376 AGEAMKLLKELQNKNLIDG 394
+ ++L +++ ++DG
Sbjct: 581 IEKGLELYEQM----IMDG 595
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I+ +A+ + M C +YN L AF G +
Sbjct: 533 YNTLIHALLRRGAFQKALTLVNDMLFRG---CTLDKITYNGLIKAFCKVGN--------I 581
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L++QM+ DG+ D S N MI G V++A F + + ++P+ +Y+
Sbjct: 582 EKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFE-FLRDAINRGFVPDIVTYNS 640
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+++GLC GR K A L D ++ +G P + +YN+ +S G V + + IE
Sbjct: 641 VLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIE 698
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 104/195 (53%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +++ L AF+ GK +Y E M+ I+PDIF+ +S+I G+ + +
Sbjct: 307 PNVVTFSALIDAFVKEGKLVEAEKLYDE--------MIKRSIDPDIFTYSSLINGFCMHD 358
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A +F M + + PN +Y+ LI G C R + EL EM ++G V ++ +Y
Sbjct: 359 RLDEAKHMFELM-ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 417
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+ L G+ + K +M+ P D ITY +LD +C+ G+ +A+ + + LQ
Sbjct: 418 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 477
Query: 389 KNL-IDGYTYTKLLD 402
+ D YTY +++
Sbjct: 478 SKMEPDIYTYNIMIE 492
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 21/276 (7%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLG-AAKMYQEMDDVVNQMLATPSFCGTEAL 175
PL L +++ +R S ++ KL A ++ EM Q PS
Sbjct: 15 PLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEM----VQSRPLPSIVE---- 66
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A+ K + + + M+N L + SYNIL F R + +
Sbjct: 67 FNKLLSAIAKMNKFDLVISLGERMQN---LRISYDLYSYNILINCFCRRSQ--------L 115
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +M+ G EPDI +L+S++ GY +++A+ + QM V Y PN+ +++
Sbjct: 116 PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM-FVMEYQPNTVTFNT 174
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL + A L D M +G P +Y ++V+ L G+++ + L +M + +
Sbjct: 175 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 234
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D + Y T++D +C +A+ L E+ NK +
Sbjct: 235 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 270
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 25/238 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F +A+++ + +F+ M + R L + +YN L G
Sbjct: 382 YNTLIKGFCKAKRVEEGMELFREM-SQRGL--VGNTVTYNTLIQGLFQAGD--------C 430
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL------PN 289
+ + +FK+MV+DG+ PDI + + ++ G + AL VV+ YL P+
Sbjct: 431 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL-------VVFEYLQKSKMEPD 483
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
++Y+ +I G+C G+ ++ +L + KG P+ Y +++S G EE
Sbjct: 484 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 543
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
EM E + TY T++ R G + +L+KE+++ + D T + ++++L D
Sbjct: 544 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 601
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 41/274 (14%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF------------TAF 221
+Y +II + R++++A +F M + PSI +YN L TA
Sbjct: 200 VVYTSIIDSLCKDRQVTQAFNLFSEMIHQG---ISPSIFTYNSLIHALCNLCEWKHVTAL 256
Query: 222 LSRGKNTYI--NHVYMETI---RC----------LFKQMVNDGIEPDIFSLNSMIKGYIL 266
L+ N+ I N V T+ C + M+ G+EP++ + N+++ G+ L
Sbjct: 257 LNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCL 316
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ +++A+++F M V + P+ SY LI+G C R + A L +EM RK +P++
Sbjct: 317 RSEMDEAVKVFDTM-VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTV 375
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y++L+ L G +++ + EM+ + + DF++Y +LD +C+ R EA+ LLK +
Sbjct: 376 TYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI 435
Query: 387 QNKNL----------IDGYTYTKLLDVLEDDFGN 410
+ N+ IDG L+ D F N
Sbjct: 436 EGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSN 469
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 13/232 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+++T++ + K+ A V M R +E P++ +YN L R +
Sbjct: 270 VIFSTVVDALCKEGKVMEAHDVVDMMIK-RGVE--PNVVTYNALMDGHCLRSE------- 319
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
M+ +F MV G PD+ S +++I GY + A+ +F +M +PN+ +Y
Sbjct: 320 -MDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEM-CRKELIPNTVTY 377
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
L+HGLC GR ++A L EM +G +P SY L+ L N ++E + L +
Sbjct: 378 STLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEG 437
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D Y V+D +CR G A L L +K L + +TYT +++ L
Sbjct: 438 SNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 489
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 10/215 (4%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L R + F + L +P+I ++N L GK + H LF +M+ +
Sbjct: 107 LQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLH--------LFDKMIGE 158
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G +P++ + ++I G + A+R+ M N P+ Y +I LC +
Sbjct: 159 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME-QGNCQPDVVVYTSIIDSLCKDRQVTQ 217
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L EM +G PS +YNSL+ AL E + L EM+ + + + + TV+D
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 277
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+C+ G+ EA ++ + + + + TY L+D
Sbjct: 278 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMD 312
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 85/169 (50%), Gaps = 2/169 (1%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ L QM + GI P+I++LN +I + + A + ++ + + PN +++ L
Sbjct: 77 TVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKI-LKLGHQPNIATFNTL 135
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GLC +G+ L D+M +GF P+ +Y +L++ L G ++ L M +
Sbjct: 136 IRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNC 195
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
D + Y +++D +C+ + +A L E+ ++ + +TY L+ L
Sbjct: 196 QPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHAL 244
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 15/256 (5%)
Query: 155 EMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
EMD+ V + F Y+T+I + + +++ +A+Y+F+ M E P+
Sbjct: 319 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRK---ELIPNTV 375
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+Y+ L G+ ++ LF +MV G PD S ++ + +++
Sbjct: 376 TYSTLMHGLCHVGR--------LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDE 427
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A+ + + N P+ Y +I G+C G + AR+L + KG P+ +Y ++
Sbjct: 428 AIALLKAIEG-SNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMI 486
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
+ L G + E K EM K + TY + R ++LL+E+ +
Sbjct: 487 NGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFS 546
Query: 392 IDGYTYTKLLDVLEDD 407
D T T L+++L DD
Sbjct: 547 ADVSTSTVLVEMLSDD 562
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++ + + R+L A+ + K ++ S N++ P I+ Y I+ G+ +
Sbjct: 412 YCILLDYLCKNRRLDEAIALLKAIEGS-NMD--PDIQIYTIVIDGMCRAGE--------L 460
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R LF + + G+ P++++ MI G + +A ++F +M Y PN +Y+
Sbjct: 461 EAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKR-KGYSPNGCTYNL 519
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ G T +L EM +GF + LV L+ +G ++++VK +
Sbjct: 520 ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG-LDQSVKQI 571
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 131/264 (49%), Gaps = 14/264 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + M+ + +++QMLA F YN IIY + KL +A + +
Sbjct: 385 TYSTLLHSFCRNGMWDDARAMLDQMLAK-GFSMNSQGYNGIIYALCKDGKLDQATRLVQE 443
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
MK+ C+P I +YN + N+ ME +F+ ++ +G+ + + N
Sbjct: 444 MKSQ---GCKPDICTYNTMIYHL--------CNNDLMEEAEHIFRNLIEEGVVANGITYN 492
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I + + + LR+ +M +++ + SY+ LI LC +G + L +EM
Sbjct: 493 TLIHALLRNGRWQEGLRLASEM-LLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVT 551
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG P++ SYN L++ L G+V + ++ EM+ + D +TY T+++ +C+ G
Sbjct: 552 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHA 611
Query: 379 AMKLLKELQNKNL-IDGYTYTKLL 401
A+ LL++L N+N+ D TY L+
Sbjct: 612 ALNLLEKLPNENVHPDIVTYNILI 635
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 119/293 (40%), Gaps = 29/293 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA Y + L A E ++++ML + ++ R A V
Sbjct: 211 DAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLV 270
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSR----------GKNTYINHVYMETI--RCL-- 241
+ M C PS+ +Y L G+ +N V + T+ CL
Sbjct: 271 DRMMTQG----CMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTE 326
Query: 242 ---------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
++ M + G PD+ + + ++ G A+R+ +M PN +
Sbjct: 327 GKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEE-KGCAPNIVT 385
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y L+H C G +AR + D+M KGF +S+ YN ++ AL +G++++ + + EM
Sbjct: 386 YSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMK 445
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ D TY T++ +C EA + + L + ++ +G TY L+ L
Sbjct: 446 SQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHAL 498
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
RA+++ M R PS RSYN++ + L+R + + + + L+++M+ D
Sbjct: 123 GRALHLLDQMP--RRFAVSPSFRSYNVVLST-LARA-DCHADALL------LYRRMLRDR 172
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ P F+ + DAL + M + +P++ Y +IH L AQG A
Sbjct: 173 VPPTTFTFGVAARALCRLGRAGDALALLRGMAR-HGCVPDAVLYQTVIHALVAQGGVAEA 231
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
L DEM G ++N LV L G V E + + M+ + +TY +L
Sbjct: 232 AMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQG 291
Query: 370 ICRRGRAGEAMKLLKELQNKNLI 392
+CR +A EA +L L N++
Sbjct: 292 LCRTRQADEACAMLGRLPEVNVV 314
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 110/214 (51%), Gaps = 12/214 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I +A +A +F+ M ++NL+ P + ++ L G+ +
Sbjct: 570 FNILIAGACKAGNFEQASALFEEMV-AKNLQ--PDVMTFGALIDGLCKAGQ--------V 618
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R + M N G+ P++ + N+++ G S + +A + +M V +P+S +Y
Sbjct: 619 EAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM-VSSGCVPDSITYGS 677
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L++ LC RT +A +L E+K G+ P + +YN LV L +G+ E+ + L EM+ K
Sbjct: 678 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKG 737
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
D +TY T++D +C+ G EA +L ++ ++
Sbjct: 738 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 771
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 135/320 (42%), Gaps = 48/320 (15%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT---PSFCGTEALYN 177
L+ F W D TY+I+ L + ++ V+ +M+ P YN
Sbjct: 698 LKSFGW-------DPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDV----VTYN 746
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T+I +A L A + M + + C P++ +Y++L G+ + E
Sbjct: 747 TLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEM 806
Query: 238 IR----------------------------CLFKQMVNDG---IEPDIFSLNSMIKGYIL 266
+R C + + DG + PD + +++I G
Sbjct: 807 MRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 866
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++A +F M + Y+PN +Y+ L++GLC + + A + + M KG P
Sbjct: 867 CGQTDEACNVFDDM-IAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVI 925
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y+ LV A V+E ++ L M + + +T+ +++D +C+ ++GEA ++ ++
Sbjct: 926 TYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDM 985
Query: 387 QNKNLI--DGYTYTKLLDVL 404
K+ + D TY L+D L
Sbjct: 986 TLKHGLAPDKITYCTLIDGL 1005
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 123/262 (46%), Gaps = 37/262 (14%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YNT+I +A L A + M +SR+ C P++ +Y++L G+
Sbjct: 254 YNTLIDSLCKAGDLEEARRLHGDM-SSRS--CVPNVVTYSVLINGLCKVGRIDEARELIQ 310
Query: 227 ----------------NTYINHVYMETIR---CLFKQMVNDG---IEPDIFSLNSMIKGY 264
N++++ + +++ C + + DG + PD + +++I G
Sbjct: 311 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 370
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+++A +F M + Y+PN +Y+ L++GLC + + A + + M KG P
Sbjct: 371 CKCGQIDEACSVFDDM-IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPD 429
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+Y+ LV A V+E ++ L M + + +T+ +++D +C+ R+GEA ++
Sbjct: 430 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFD 489
Query: 385 ELQNKN--LIDGYTYTKLLDVL 404
++ K+ + D TY L+D L
Sbjct: 490 DMALKHGLVPDKITYCTLIDGL 511
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 137/290 (47%), Gaps = 22/290 (7%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTII 180
+ ++WA+ P F+H +++ L + + D+ L P C Y+T++
Sbjct: 96 QFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRL--PPRCRPNHFTYSTLL 153
Query: 181 -YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ + R + F+ +++S S+ YNI+ + G+ ++
Sbjct: 154 RATYKAGGDVERTLGFFRRIRSSSR-----SVADYNIVLQSLCRAGETARALEIFR---- 204
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+M DG+ P I + N++I G SN + + +F ++ V + P+ +Y+ LI
Sbjct: 205 ---GEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL-VERGHHPDVVTYNTLIDS 260
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV- 358
LC G + AR L +M + VP+ +Y+ L++ L G ++E + + EM K V
Sbjct: 261 LCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL 320
Query: 359 -DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL---IDGYTYTKLLDVL 404
+ ITY + LD +C++ EA +L++ L++ +L D T++ L+D L
Sbjct: 321 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 370
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 17/274 (6%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
R D T+ + L E V + M+A + YN ++ +A K+ R
Sbjct: 355 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAG-GYVPNVITYNALVNGLCKADKMER 413
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A + + M + P + +Y++L AF K + ++ L M + G
Sbjct: 414 AHAMIESMVDKG---VTPDVITYSVLVDAFC---KASRVDEALE-----LLHGMASRGCT 462
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++ + NS+I G S+ +A ++F M + + +P+ +Y LI GL GR A
Sbjct: 463 PNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEA 522
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L D M P + ++N ++ L+ G+V ++ M+E + D +T+ ++ C
Sbjct: 523 LLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGAC 578
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ G +A L +E+ KNL D T+ L+D L
Sbjct: 579 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 612
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 20/274 (7%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
R D T+ + L E +V + M+A + YN ++ + K+ R
Sbjct: 849 RVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAG-GYVPNVVTYNVLMNGLCKTDKMER 907
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A + + M + P + +Y++L AF K ++++ L M + G
Sbjct: 908 AHAMIESMVDKG---VTPDVITYSVLVDAFC---KASHVDEALE-----LLHGMASRGCT 956
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++ + NS+I G S+ +A ++F M + + P+ +Y LI GL G A
Sbjct: 957 PNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEV 1016
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L D M P + ++N ++ L+ G+V + L M+E + D +T+ ++ C
Sbjct: 1017 LLDAMPD----PDTYAFNCCINGLSKLGDVS---RALHRMLELELVPDKVTFNILIAGAC 1069
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ G +A L +E+ KNL D T+ L+D L
Sbjct: 1070 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 1103
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 115/270 (42%), Gaps = 23/270 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY ++ A E ++++ M + TP+ +N+II ++ + A
Sbjct: 429 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNV----VTFNSIIDGLCKSDRSGEA 484
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F M L P +Y L G+ + +++ +P
Sbjct: 485 FQMFDDMALKHGL--VPDKITYCTLIDGLFRTGRAGQA------------EALLDAMPDP 530
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D ++ N I G V+ AL+++++M + +P+ +++ LI G C G + A L
Sbjct: 531 DTYAFNCCINGLSKLGDVSRALQVYNRM-LELELVPDKVTFNILIAGACKAGNFEQASAL 589
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+EM K P ++ +L+ L G+VE L M P + +TY ++ +C+
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 649
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
GR EA + L+E+ + + D TY L+
Sbjct: 650 SGRIEEACQFLEEMVSSGCVPDSITYGSLV 679
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 87/220 (39%), Gaps = 29/220 (13%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY ++ A E ++++ M + TP+ +N+II ++ + A
Sbjct: 923 DVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNV----VTFNSIIDGLCKSDQSGEA 978
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F M L P +Y L G + L M +P
Sbjct: 979 FQMFDDMTLKHGLA--PDKITYCTLIDGLFRTG--------WAGQAEVLLDAMP----DP 1024
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D ++ N I G + + D R H+M + +P+ +++ LI G C G + A L
Sbjct: 1025 DTYAFNCCINGL---SKLGDVSRALHRM-LELELVPDKVTFNILIAGACKAGNFEQASAL 1080
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+EM K P ++ +L+ L G+VE T W+++
Sbjct: 1081 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAT----WDIM 1116
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 157/331 (47%), Gaps = 23/331 (6%)
Query: 82 SKPALDDT-QFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASK--QPRFRHDAS 138
+ P+L + + + + P R N + L ++++ Q DP L++F A +P F H+
Sbjct: 26 TTPSLPQSYKIQPPIKPWPHRLNPKLLSSLISRQHDPHFSLQIFLHAQNHHKPPFSHNPQ 85
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + KL + + E++ ++ + ++P C E T+I + A K RA+ F
Sbjct: 86 TYQAIFLKLSKFRCFSEIESLLAGLRSSPPHCCGEEPIVTVIRGYGLAGKPVRALKTFLR 145
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG----IEPDI 254
+++ RPS+RS N L + + N Y R F N G + P++
Sbjct: 146 IES---FGIRPSVRSINALLNSLVQ-------NKRY----RLAFLVFKNCGERFRVLPNV 191
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
S N ++K N V A+++ +M + +PN SY ++ G +G A ++
Sbjct: 192 VSCNILLKALCKGNEVEVAVKVLDEMPGM-GLVPNVVSYTTVLGGFVWRGDMDGAMKVFR 250
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
E+ +G+ P SY LV G++ + ++ + M + + +TY ++ C+
Sbjct: 251 EVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEK 310
Query: 375 RAGEAMKLLKELQNKNLIDGYTY-TKLLDVL 404
++GEA+ L++++ K+L+ G K++D+L
Sbjct: 311 KSGEAVNLIEDMIAKDLVVGSELCCKVVDLL 341
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 50/264 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ F + A+ VF+ + + P + SY +L F GK +
Sbjct: 229 YTTVLGGFVWRGDMDGAMKVFREVLDRG---WSPDVTSYTVLVDGFCRLGK-------LV 278
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------------- 280
+ IR + M ++G+EP+ + MI+ Y +A+ + M
Sbjct: 279 DAIR-VMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKV 337
Query: 281 -------GVVYNY-------------LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
G V L + LIH LC +G+ AR + DE KG
Sbjct: 338 VDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFG-KG 396
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
V S +YN+L++ L GE+ E + LW +M+EK + TY ++ C+ G A E
Sbjct: 397 SVASLLTYNTLIAGLCEGGELCEAAR-LWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEG 455
Query: 380 MKLLKE-LQNKNLIDGYTYTKLLD 402
+++L+E L+N+ L + TYT L+D
Sbjct: 456 IRVLEEMLENRCLPNKSTYTILID 479
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 89/210 (42%), Gaps = 13/210 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY +M + K E +++ M+A G+E L ++ E + +A +++
Sbjct: 298 TYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSE-LCCKVVDLLCEEGNVEKACEMWR- 355
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + +N ++ + L +GK +V+ E G + + N
Sbjct: 356 MVSRKNCGLNGAV-VVSTLIHWLCKKGKVLEARNVFDE---------FGKGSVASLLTYN 405
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I G + +A R++ M V PN+F+Y+ LI G C G K + +EM
Sbjct: 406 TLIAGLCEGGELCEAARLWDDM-VEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLE 464
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+P+ +Y L+ + L G +++ + +
Sbjct: 465 NRCLPNKSTYTILIDGILLLGGMKQEINKV 494
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
++++I V +A +F + G + + +Y+ LI GLC G A L D+M
Sbjct: 370 VSTLIHWLCKKGKVLEARNVFDEFG--KGSVASLLTYNTLIAGLCEGGELCEAARLWDDM 427
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
KG P++ +YN L+ G +E ++ L EM+E + + TY ++D I G
Sbjct: 428 VEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLG 485
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 20/221 (9%)
Query: 205 LECR--PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
LEC S+ +NIL F G+ + R +F + G+ P + S N+++
Sbjct: 120 LECGYPASLYFFNILMHRFCKEGE--------IRVARSVFDAITKWGLRPSVVSFNTLMN 171
Query: 263 GYILSNHVNDALRI---FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
GYI +++ R+ H GV P+ ++Y LI+GLC + + A EL DEM K
Sbjct: 172 GYIRLGDLDEGFRLKSAMHASGVE----PDVYTYSVLINGLCKESKIDGANELFDEMLDK 227
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G VP+ ++ +L+ NG V+ ++ +M+ + D ITY T++ +C++G +A
Sbjct: 228 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQA 287
Query: 380 MKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSIRHHLR 417
L+ E++ K L D TYT L+D E D + H R
Sbjct: 288 QNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKR 328
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 104/195 (53%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + +Y++L K N LF +M++ G+ P+ + ++I G+ +
Sbjct: 196 PDVYTYSVLINGLCKESKIDGANE--------LFDEMLDKGLVPNGVTFTTLIDGHCKNG 247
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V+ A+ I+ QM + + + +Y+ LI+GLC +G K A+ L DEM+ KG P +Y
Sbjct: 248 RVDLAMEIYKQM-LSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITY 306
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ G++E ++ MI++ +D + Y T++ +C+ GR+ +A K+L+E+ +
Sbjct: 307 TTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLS 366
Query: 389 KNL-IDGYTYTKLLD 402
L D TYT +++
Sbjct: 367 VGLKPDTGTYTMIIN 381
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M R +P +Y L
Sbjct: 254 EIYKQMLS-QSLSADLITYNTLIYGLCKKGDLKQAQNLIDEM---RMKGLKPDKITYTTL 309
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D ++I G DA ++
Sbjct: 310 IDGCCKEGD--------LETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKML 361
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P++ +Y +I+ C +G +L EM+R G VPS
Sbjct: 362 REMLSV-GLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPS 407
>gi|199601721|dbj|BAG70980.1| pentatricopeptide (PPR) repeat-containing protein [Musa balbisiana]
Length = 788
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 152/352 (43%), Gaps = 46/352 (13%)
Query: 89 TQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLG 148
T+ + ++ L F+ + V+ P L F W K FRHD TY + L
Sbjct: 130 TRLQNSIRSLARSFDQSLVLAVLRGARHPDHALHFFRWVEKTG-FRHDPDTYREIILLLA 188
Query: 149 AAKMYQE-----MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSR 203
A M +DD+ ++ L PS E ++ ++I + AR AV +F+ +
Sbjct: 189 RASMLNHARCILLDDMPDR-LVPPS----EDMFASLIEGYGCARIPQEAVKIFRRLP--- 240
Query: 204 NLECRPSIRSYNILFTAFLSRGK--------NTYINH-------------------VYME 236
L ++RSY+ +F A L G+ N I + ME
Sbjct: 241 ELGVTRTVRSYDAVFKAILRSGRVAMARRLFNAMIAEGVLPVLSTYNTLLWGFCLSIKME 300
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T + F M GI PD+ + N+++ G+ + ++DA ++F +M + PNS SY+ +
Sbjct: 301 TAQRFFADMKERGIAPDLVTYNTILNGWARAKKMDDAEKVFAEM-TAAGFAPNSISYNIM 359
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN-GEVEETVKNLWEMIEKQ 355
I G GR + + EM KG S K++ +L+ L + G E K L EM + Q
Sbjct: 360 IKGYVCSGRVDDGLRMFSEMGEKGLRFSEKTFAALMPGLCDDVGRAAEARKALNEMAKLQ 419
Query: 356 -RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN--LIDGYTYTKLLDVL 404
P D + ++ +C G A+++ ++ N ++D Y LL+ L
Sbjct: 420 LTPSDKSIFLRLVTSLCESGDLEGALEVHRKTSQFNHVVVDPMQYGVLLESL 471
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI---LSNHVNDALRIFHQMGVVYNYL 287
+H + F+Q++ G++ D + NS+I+G+ + ++ L I + GV +
Sbjct: 515 DHGDTKKAEAFFRQLMKKGVD-DKVAFNSLIRGHAKEGMPEAASEILTIMTRHGVPTD-- 571
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
+ SY L+ + +AR D M +G +PS+ + S++ AL +G V+ +
Sbjct: 572 --ADSYVLLVESFLKKSEPADARTALDSMMEQGHLPSASLFRSVMVALFDDGRVQTASRV 629
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
+ MIEK + +LD + RG EA+
Sbjct: 630 MKSMIEKGVKENMDMVHKILDALFMRGHVEEAL 662
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M G+ D S +++ ++ + DA M + +LP++ + ++ L G
Sbjct: 563 MTRHGVPTDADSYVLLVESFLKKSEPADARTALDSM-MEQGHLPSASLFRSVMVALFDDG 621
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R + A + M KG + + ++ AL + G VEE + + MI D
Sbjct: 622 RVQTASRVMKSMIEKGVKENMDMVHKILDALFMRGHVEEALGRINLMIMNDCTPDI---D 678
Query: 365 TVLDEICRRGRAGEAMKLLK-ELQNKNLIDGYTYTKLLDVL 404
+L +C +A EA KL++ L+ + +Y ++LDVL
Sbjct: 679 HLLITLCDSDKATEAQKLVEFALERDCDVSFSSYDRVLDVL 719
>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
Length = 696
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 17/314 (5%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQE--DPLVCLELFNWASK-QPRFRHDASTYHIMT 144
+ +F A+ L PRF L + +PL+C+ L+ WAS+ F D +
Sbjct: 66 NAEFAAALPRLGPRFVVRALRAAAEREGVGEPLLCVRLYVWASRFGAHFARDGG----VR 121
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
R L A + + +++A CG E + +L A Y +
Sbjct: 122 RALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPR 181
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
L RPS YN L A + G ++ Y+ F+QM DG PD F+ NS++ G
Sbjct: 182 LGLRPSTAVYNALIAASVRAGA---VDTAYLR-----FQQMPADGCRPDRFTYNSLVHGV 233
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
V++A+R+ QM PN F+Y L+ G C GR + A + D+MK KG PS
Sbjct: 234 CRRGIVDEAVRLVRQMEG-EGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPS 292
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+Y +LV + E ++ + L + + + + T+L + ++ A EA++ K
Sbjct: 293 EATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFAK 352
Query: 385 ELQNKN-LIDGYTY 397
+ + L+D +
Sbjct: 353 RMSARGYLLDSTAF 366
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F +A + +A + K M++ L P++ ++N L + + G +
Sbjct: 436 YNMVIDCFVKAGAVDKAEEIVKEMQDKGFL---PNLVTFNTLISGYSKLGN--------V 484
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + K ++ G PDI + S+I G ++ ++DA F +M + PN+ +Y+
Sbjct: 485 HNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAE-WGVRPNAQTYNV 543
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+H LC+ G A +L ++MK G P + S+N+L+ + +V++ +M+
Sbjct: 544 LMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFG 603
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL 383
D TY +++ +C R +A ++L
Sbjct: 604 VVPDSYTYNSLIKALCDERRVNKAKEIL 631
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
S+ SYN++ F+ G ++ + K+M + G P++ + N++I GY +
Sbjct: 432 SVMSYNMVIDCFVKAGA--------VDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGN 483
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
V++A ++ +M + + ++P+ ++ LI GLC + +A +EM G P++++YN
Sbjct: 484 VHNA-KVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYN 542
Query: 330 SLVSALALNGEVEETVKNLWEM-IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
L+ L G V + + L +M I+ P D ++ ++ CR + +A + ++
Sbjct: 543 VLMHTLCSAGHVNKAIDLLNKMKIDGVTP-DAYSFNALILSFCRMRKVDKAEDIFNDMVR 601
Query: 389 KNLI-DGYTYTKLLDVLEDD 407
++ D YTY L+ L D+
Sbjct: 602 FGVVPDSYTYNSLIKALCDE 621
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 15/188 (7%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
VV +ML F + ++I +L A F+ M RP+ ++YN+L
Sbjct: 489 VVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAE---WGVRPNAQTYNVLM 545
Query: 219 TAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
S G N I+ L +M DG+ PD +S N++I + V+ A IF
Sbjct: 546 HTLCSAGHVNKAID---------LLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIF 596
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS-SKSYNSLVSALA 336
+ M V + +P+S++Y+ LI LC + R A+E+ +R G S ++SY +V+ALA
Sbjct: 597 NDM-VRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALA 655
Query: 337 LNGEVEET 344
G+ E
Sbjct: 656 KMGQFSEA 663
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 3/130 (2%)
Query: 278 HQMG--VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
H +G V+ L + SY+ +I G A E+ EM+ KGF+P+ ++N+L+S
Sbjct: 419 HYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISGY 478
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDG 394
+ G V L ++E D IT+ +++D +C + +A +E+ + +
Sbjct: 479 SKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNA 538
Query: 395 YTYTKLLDVL 404
TY L+ L
Sbjct: 539 QTYNVLMHTL 548
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 13/233 (5%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
EM D + Q +A YNT++ +A +L A + + MK S C P + +Y
Sbjct: 169 EMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS---GCAPDVVAY 225
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ GK + V +QM + +P++ + N+++ G S ++ AL
Sbjct: 226 SSFVYGLCKSGKVLNAHQV--------LEQMRDSDHDPNVVTYNTILDGLCKSGKIDTAL 277
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+ QM N Y ++ GLC GRT+ AR + + M R G P +Y+SLV+
Sbjct: 278 EMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNG 337
Query: 335 LALNGEVEETVKNLWEM-IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L G++EE V+ + EM +E +P + +TY +++ +C GR EA ++++E+
Sbjct: 338 LCKAGKIEEAVEAVREMAMEGCKP-NAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 40/281 (14%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSR 191
+ D TY+ + L A QE + ++ +M A S C + + Y++ +Y ++ K+
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA--SGCAPDVVAYSSFVYGLCKSGKVLN 240
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK---------------NTYINHVYME 236
A V + M++S + P++ +YN + GK +N V
Sbjct: 241 AHQVLEQMRDSDH---DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297
Query: 237 TI-------------RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
T+ R + + M G PD+ + +S++ G + + +A+ +M +
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM-AM 356
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV-----PSSKSYNSLVSALALN 338
PN+ +Y L+HGLC+ GR A + +EM G PS +YN+L+ L
Sbjct: 357 EGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKA 416
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G +++ +K M + D ++Y T+++ + R GRA +A
Sbjct: 417 GRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 131/300 (43%), Gaps = 27/300 (9%)
Query: 99 PPR---FNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE 155
PP FN L N + Q P C L + + + + +Y+ + L + + E
Sbjct: 7 PPNSVTFN--ALVNGFSKQGRPGDCERLLETMAARG-IQPNVVSYNGLLEGLCKLERWHE 63
Query: 156 MDDVVNQMLA-----TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
+++V M++ TP Y+T++ + +A K+ + + K + SR L RP
Sbjct: 64 AEELVRDMISRGGRSTPDL----VTYSTLLSGYCKAGKVEESRELLKEVI-SRGL--RPD 116
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
Y + + + + E IR G P + + N++I G ++
Sbjct: 117 ALMYTKVMASLCKSARLGEALELLEEMIR--------AGCCPTLITFNTLISGCCREKNL 168
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
A + M + +Y+ L+ GLC GR + A +L + MK G P +Y+S
Sbjct: 169 EMADSLLQTM-AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS 227
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
V L +G+V + L +M + + +TY T+LD +C+ G+ A+++++++ + +
Sbjct: 228 FVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD 287
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG---EVEET 344
PNS +++ L++G QGR + L + M +G P+ SYN L+ L E EE
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDV 403
V+++ + P D +TY T+L C+ G+ E+ +LLKE+ ++ L D YTK++
Sbjct: 68 VRDMISRGGRSTP-DLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMAS 126
Query: 404 L 404
L
Sbjct: 127 L 127
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 84/217 (38%), Gaps = 44/217 (20%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P+ ++N L F +G+ L + M GI+P++ S N +++G
Sbjct: 6 CPPNSVTFNALVNGFSKQGRPGDCER--------LLETMAARGIQPNVVSYNGLLEGLCK 57
Query: 267 SNHVNDALRIFHQM-GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE---------- 315
++A + M P+ +Y L+ G C G+ + +REL E
Sbjct: 58 LERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDA 117
Query: 316 -------------------------MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
M R G P+ ++N+L+S +E L
Sbjct: 118 LMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQT 177
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
M D +TY T++D +C+ GR EA +LL+ ++
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 156/363 (42%), Gaps = 59/363 (16%)
Query: 92 RC-AVSELPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGA 149
RC A+S+L F+++ + V+ L+ +P L F + SKQ FR + +Y + L
Sbjct: 21 RCNAISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSR 80
Query: 150 AKMYQEMDDVVNQML------------------ATPSFCGTEALYNTIIYFFAEARKLSR 191
+MY E +NQ++ F + +++ I+ + E
Sbjct: 81 GRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKN 140
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC----------- 240
A+YVF M + PS+RS N L + G+ ++VY + IR
Sbjct: 141 ALYVFDNMGKCGRI---PSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSI 197
Query: 241 ----------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMG 281
K+M N G+EP+I + +S+I GY+ V A L+ + G
Sbjct: 198 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 257
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK-GFVPSSKSYNSLVSALALNGE 340
V N + +Y LI G C Q + A ++ M+ + VP ++Y L+ G+
Sbjct: 258 VSRNVV----TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 313
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
+++ V+ L EM+ + ++++ C+RG EA ++ + + NL D Y+Y
Sbjct: 314 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 373
Query: 400 LLD 402
LLD
Sbjct: 374 LLD 376
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 113/225 (50%), Gaps = 15/225 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I + + K+ A V + M+ L P R+Y +L + GK
Sbjct: 265 YTLLIKGYCKQCKMDEAEKVLRGMQEEAALV--PDERAYGVLIDGYCRTGKID------- 315
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +R L +M+ G++ ++F NS+I GY +++A + +M V +N P+S+SY+
Sbjct: 316 DAVR-LLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM-VDWNLKPDSYSYNT 373
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C +G T A LCD+M ++G P+ +YN+L+ L G ++ ++ M+++
Sbjct: 374 LLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 433
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKL 400
D + Y T+LD + + A L K++ L G+T +++
Sbjct: 434 VAPDEVGYSTLLDGLFKMENFEGASTLWKDI----LARGFTKSRI 474
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P SYN L + G + + L +M+ +GIEP + + N+++KG
Sbjct: 365 KPDSYSYNTLLDGYCREGHTSEAFN--------LCDKMLQEGIEPTVLTYNTLLKGLCRV 416
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+DAL+I+H M + P+ Y L+ GL + A L ++ +GF S +
Sbjct: 417 GAFDDALQIWHLM-MKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 475
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
+N+++S L G++ E + +M + D ITYRT++D C+ G+A K+
Sbjct: 476 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV 530
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P+ N I G + V+DA R F + + ++P++F+Y LIHG A G A
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSL-KGFVPDNFTYCTLIHGYSAAGNVDEAFR 736
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L DEM R+G VP+ +YN+L++ L + V+ + ++ +K + +TY T++D C
Sbjct: 737 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 796
Query: 372 RRGRAGEAMKL 382
+ G A KL
Sbjct: 797 KIGNMDAAFKL 807
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 106/260 (40%), Gaps = 43/260 (16%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN++I ++R+L + M R L P+I +Y L + G Y
Sbjct: 545 MYNSLISGLFKSRRLVEVTDLLTEM-GIRGLT--PNIVTYGALIDGWCKEGMLDKAFSSY 601
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNY----- 286
E M +G+ +I ++M+ G +++A + +M G ++
Sbjct: 602 FE--------MTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLK 653
Query: 287 -----------------------LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
LPN+ Y+ I GLC G+ +AR + KGFVP
Sbjct: 654 SDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVP 713
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ +Y +L+ + G V+E + EM+ + + +TY +++ +C+ A +L
Sbjct: 714 DNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLF 773
Query: 384 KELQNKNLI-DGYTYTKLLD 402
+L K L + TY L+D
Sbjct: 774 HKLHQKGLFPNVVTYNTLID 793
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ YNI GK ++ R F + G PD F+ ++I GY +
Sbjct: 678 PNNIVYNIAIAGLCKTGK--------VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 729
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+V++A R+ +M + +PN +Y+ LI+GLC A+ L ++ +KG P+ +Y
Sbjct: 730 NVDEAFRLRDEM-LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTY 788
Query: 329 NSLVSALALNGEVEETVKNLWEMIEK 354
N+L+ G ++ K +MIE+
Sbjct: 789 NTLIDGYCKIGNMDAAFKLKDKMIEE 814
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+K ++ G + N+MI G + +A IF +M + P+ +Y
Sbjct: 455 EGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL-GCSPDGITYRT 513
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C A ++ M+R+ PS + YNSL+S L + + E L EM +
Sbjct: 514 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 573
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ +TY ++D C+ G +A E+ L
Sbjct: 574 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 609
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
+M+ G+ P+I + N++I G S +V+ A R+FH++ PN +Y+ LI G C
Sbjct: 740 EMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ-KGLFPNVVTYNTLIDGYCKI 798
Query: 304 GRTKNARELCDEMKRKGFVPS 324
G A +L D+M +G PS
Sbjct: 799 GNMDAAFKLKDKMIEEGISPS 819
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 99/267 (37%), Gaps = 45/267 (16%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
F + +NT+I + K+ A +F MK+ L C P +Y L + K
Sbjct: 468 GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD---LGCSPDGITYRTLIDGYC---KA 521
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
+ + + + M + I P I NS+I G S + + + +MG+
Sbjct: 522 SNVGQAFK-----VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGI-RGLT 575
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN +Y LI G C +G A EM G + +++VS L G ++E
Sbjct: 576 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 635
Query: 348 LWEMIEK-------------------QRPVDF-------------ITYRTVLDEICRRGR 375
+ +M++ Q+ D I Y + +C+ G+
Sbjct: 636 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 695
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
+A + L K + D +TY L+
Sbjct: 696 VDDARRFFSMLSLKGFVPDNFTYCTLI 722
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 107/295 (36%), Gaps = 55/295 (18%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K+G +E+ D + + +P Y T+I + +A + +A V M+
Sbjct: 485 KMGKMVEAEEIFDKMKDLGCSPD----GITYRTLIDGYCKASNVGQAFKVKGAMERE--- 537
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
PSI YN L + + + L +M G+ P+I + ++I G+
Sbjct: 538 PISPSIEMYNSLISGLFKSRRLVEVTD--------LLTEMGIRGLTPNIVTYGALIDGWC 589
Query: 266 LSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
++ A + +M G+ N + S ++ GL GR A L +M GF
Sbjct: 590 KEGMLDKAFSSYFEMTENGLSANIIICS----TMVSGLYRLGRIDEANLLMQKMVDHGFF 645
Query: 323 PSSKS--------------------------------YNSLVSALALNGEVEETVKNLWE 350
P + YN ++ L G+V++ +
Sbjct: 646 PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 705
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+ K D TY T++ G EA +L E+ + L+ TY L++ L
Sbjct: 706 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 760
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 156/375 (41%), Gaps = 77/375 (20%)
Query: 99 PPR-FNNEELCNVMTLQEDPLVCLELFNWASKQPR-FRHDASTYHIMTRKLGAAKMYQEM 156
PP+ + L +++ LQ P + L+LF + P+ FR+ +Y ++ KLG ++M+ EM
Sbjct: 3 PPKPISPFRLSSLLRLQNGPKLALQLFQNPNPDPKPFRYTHLSYDLIITKLGRSRMFHEM 62
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSR------------- 203
+ +++Q+ F E ++ +I F+ AR RA+ F+ + R
Sbjct: 63 EQILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSLLN 122
Query: 204 -NLECR-----------------PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
L C+ P++ +YNIL A G+ +V F +M
Sbjct: 123 ALLNCKEFEKFDGILSGIDKFATPNVCTYNILINACCLSGRLGDAWNV--------FDEM 174
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC---- 301
+ + P++ + ++I G + +++A R+ M V+N PN+F Y L+ GLC
Sbjct: 175 LRKHVCPNVVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNE 234
Query: 302 -------------------------------AQGRTKNARELCDEMKRKGFVPSSKSYNS 330
GR + +EM+ G P + +YN+
Sbjct: 235 LSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNA 294
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
++S + E L EM+ K D I+Y ++ +C+ G+ EA L +++ +
Sbjct: 295 MISGFCNEKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRG 354
Query: 391 LI-DGYTYTKLLDVL 404
D +Y L D L
Sbjct: 355 CTPDVGSYRILFDGL 369
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 12/175 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+Y+T+I A K+ R VF ++ R C+P +YN + + F N
Sbjct: 255 GIYSTLI---AALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGF--------CNEK 303
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
E + ++MV G +PD+ S N +I G +A +F M P+ SY
Sbjct: 304 DFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPR-RGCTPDVGSY 362
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
L GLC + A + DEM KG+ P S S V AL E+ V++
Sbjct: 363 RILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEALCSGRELGVVVQSF 417
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ L A G+ + V++ + ++M +G +PD + N+MI G+ A
Sbjct: 257 YSTLIAALFKVGRK---DEVFV-----VLEEMRENGCKPDTVTYNAMISGFCNEKDFEAA 308
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
+ +M VV P+ SY+ +I GLC +G+ + A +L ++M R+G P SY L
Sbjct: 309 YGVLEEM-VVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFD 367
Query: 334 ALALNGEVEETVKNLWEMIEK 354
L + E L EM+ K
Sbjct: 368 GLCEGMQFNEAAFILDEMVFK 388
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 138/276 (50%), Gaps = 22/276 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLSRAVYV 195
TY+++ L K +E +D++ +M G E YN I + +A+ +
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREK----GVEPDVVTYNIQINGYCRCGNAKKALSL 414
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M +N+ RP++ +Y L F R + M FK+ + +G+ PDI
Sbjct: 415 FDEMV-EKNI--RPTVETYTSLIDVFGKRNR--------MSEAEEKFKKSIKEGMLPDII 463
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
N++I G+ ++ +++ A ++ +M +P+ +++ L+ G C + + + A++L DE
Sbjct: 464 MFNALIDGHCVNGNIDRAFQLLKEMDNA-KVVPDEVTFNTLMQGYCRERKVEEAKKLLDE 522
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
MK +G P SYN+L+S + G++++ ++ EM+ +TY ++ + G
Sbjct: 523 MKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGE 582
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLDVLE--DDF 408
A A +LL+E+Q+K + D TY +++ ++ DD
Sbjct: 583 ADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDL 618
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ +YN + + RGK E +FK M + ++PD ++ NS I
Sbjct: 249 KPNVVTYNTVINGYCLRGK--------FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKE 300
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ +A + ++ + +PN+ +Y+ LI G C +G A DEM +G V S +
Sbjct: 301 RRIEEASGVLCKL-LESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFT 359
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN L+ AL L +EE + EM EK D +TY ++ CR G A +A+ L E+
Sbjct: 360 YNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMV 419
Query: 388 NKNLIDGY-TYTKLLDVL---------EDDFGNSIRHHL 416
KN+ TYT L+DV E+ F SI+ +
Sbjct: 420 EKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGM 458
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 20/268 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T++IM L +++ D + M YNT+I + K A +FK
Sbjct: 219 TFNIMINILCREGKWKKAKDFIGHM-EVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKT 277
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
MK+ +NL +P +YN +F+SR +E + +++ G+ P+ + N
Sbjct: 278 MKD-KNL--KPDCYTYN----SFISR----LCKERRIEEASGVLCKLLESGLVPNAVTYN 326
Query: 259 SMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
++I G ++ A +M G+V + F+Y+ LIH L + R + A ++ E
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASV----FTYNLLIHALFLEKRIEEAEDMIKE 382
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+ KG P +YN ++ G ++ + EM+EK TY +++D +R R
Sbjct: 383 MREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNR 442
Query: 376 AGEA-MKLLKELQNKNLIDGYTYTKLLD 402
EA K K ++ L D + L+D
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALID 470
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
++N +I + RA + K M N++ + P ++N L + K
Sbjct: 464 MFNALIDGHCVNGNIDRAFQLLKEMDNAKVV---PDEVTFNTLMQGYCRERK-------- 512
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E + L +M GI+PD S N++I GY + DAL +F +M + + P +Y+
Sbjct: 513 VEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEM-LSLGFDPTLLTYN 571
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
LI G G +A EL EM+ KG P +Y ++ A+ N ++ E
Sbjct: 572 ALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
++++MV I+ I + N MI A M V Y PN +Y+ +I+G
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEV-YGVKPNVVTYNTVINGY 262
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G+ + A ++ MK K P +YNS +S L +EE L +++E +
Sbjct: 263 CLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNA 322
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+TY ++D C +G +A E+ N+ ++ +TY L+ L
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHAL 367
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 126/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT+I + + L + M S
Sbjct: 148 KEGEMRLAQSVFDAITKWGLRPSVVS----FNTLINGYIKLGDLDEGFRLKSAMHASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y+IL GK N LF +M+++G+ P+ + ++I G+
Sbjct: 202 -AQPDVYTYSILINGLCKEGKLDEANE--------LFNEMLDNGLVPNGVTFTTLIHGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + P+ +Y+ LI+GLC +G K +L DEM G P
Sbjct: 253 KNEKVDLAMEIYKQM-LSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
SY +L+ G++E ++ +MI++ +D + Y ++ +CR GRA +A K+L+E
Sbjct: 312 ISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLRE 371
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 372 MLSVGLKPDNGTYTMIIN 389
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
Y + + ++ L+ C +G + A+ + D + + G PS S+N+L++ G+++E
Sbjct: 131 GYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEG 190
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ M D TY +++ +C+ G+ EA +L E+ + L+ +G T+T L+
Sbjct: 191 FRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLI 248
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 132/273 (48%), Gaps = 14/273 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ DA TY + AKM + V QML + + T YN I+ +A +++ A
Sbjct: 253 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVST-VTYNIILDGLCKAGRVAEA 311
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
F M+ C ++ +Y+ L F S G + LF++M++ G EP
Sbjct: 312 YATFLAMEER---GCVATVVTYSALMDGFCSEGNVSAAVE--------LFRRMLDRGCEP 360
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT-KNARE 311
++ S N +I+G + + A F ++ + P+ ++++ +HGLC + T + E
Sbjct: 361 NLVSYNIIIRGLCRAGKLAKAYFYFEKL-LQRRLCPDVYTFNAFLHGLCQRLDTVSDGVE 419
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L + M +G P+ SY+ L+ + G +E ++ EM+ + D + + T++ +C
Sbjct: 420 LFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLC 479
Query: 372 RRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
GR EA+++ +EL+ ++ D ++Y LLD L
Sbjct: 480 IAGRVDEALEVFRELERRSAPDAWSYWSLLDGL 512
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 51/271 (18%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T Y ++ +A +L A+ V + M N P++++Y ++ G+
Sbjct: 76 TTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGN---SPTLKTYTVVIDGLSKAGR----- 127
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY---LP 288
+E R +F M+ +G PD F ++IKG S +A ++ + ++ +P
Sbjct: 128 ---VEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCD-EMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
+ +Y LI GLC GR AR++ D E +GF+P + +Y S++ L G VEE +
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244
Query: 348 LWEM-----------------------------------IEKQRPVDFITYRTVLDEICR 372
EM ++ V +TY +LD +C+
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304
Query: 373 RGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
GR EA ++ + + TY+ L+D
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMD 335
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 14/205 (6%)
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+ C P + ++ ++ L R K ++ + ++ V G EPD + N I G
Sbjct: 1 MPCSPDMVAFTVVING-LCREKR-------LDEAFSVLERAVRAGCEPDYVTYNVFIDGL 52
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ V+DA ++ +M LP + +Y L+ GL GR A + ++M KG P+
Sbjct: 53 CKAERVDDAFQLLKKMDE-KKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPT 111
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
K+Y ++ L+ G VEE + +M+ D Y ++ +C+ G+ EA L K
Sbjct: 112 LKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYK 171
Query: 385 ELQNKN-----LIDGYTYTKLLDVL 404
E + + D TYT L+D L
Sbjct: 172 EANARKHHATAVPDVVTYTSLIDGL 196
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 143/317 (45%), Gaps = 23/317 (7%)
Query: 83 KPALDDTQFRCAVSEL------PPRFNNEELCNVMT---LQEDPLVCLELFNWASKQPRF 133
+P D Q +SEL P + EL + + + L F+W KQ +
Sbjct: 108 EPNFDSGQLDALLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALCAFDWFMKQKDY 167
Query: 134 RH--DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
+ D S I+ LG ++ N L F Y ++I FA + +
Sbjct: 168 QSMLDNSVIAIVISMLGKEGRVSSAANLFNG-LQEDGFSLDVYSYTSLISAFANSGRYRE 226
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
AV VFK M+ C+P++ +YN++ F G I L ++M +DGI
Sbjct: 227 AVNVFKKMEEEG---CKPTLITYNVILNVFGKMG-------TPWNKITSLVEKMKSDGIA 276
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD ++ N++I + +A ++F +M + + +Y+ L+ R K A +
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFSHDKVTYNALLDVYGKSHRPKEAMK 335
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ +EM+ GF PS +YNSL+SA A +G ++E ++ +M EK D TY T+L
Sbjct: 336 VLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 372 RRGRAGEAMKLLKELQN 388
R G+ AM + +E++N
Sbjct: 396 RAGKVESAMNIFEEMRN 412
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 13/260 (5%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
K F HD TY+ + G + +E V+N+M F + YN++I +A
Sbjct: 306 KAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELN-GFSPSIVTYNSLISAYARDGM 364
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L A+ + M +P + +Y L + F GK +E+ +F++M N
Sbjct: 365 LDEAMELKNQMAEKGT---KPDVFTYTTLLSGFERAGK--------VESAMNIFEEMRNA 413
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G +P+I + N+ IK Y D ++IF ++ V P+ +++ L+ G
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVC-GLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
+ EMKR GFVP +++N+L+SA + G E+ + M++ D TY TVL
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 369 EICRRGRAGEAMKLLKELQN 388
+ R G ++ K+L E+++
Sbjct: 533 ALARGGMWEQSEKVLAEMED 552
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 125/325 (38%), Gaps = 73/325 (22%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAE 185
K+ F + T++ + +++ V +ML TP + YNT++ A
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL----STYNTVLAALAR 536
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI------- 238
++ V M++ R C+P+ +Y L A+ + GK + H E +
Sbjct: 537 GGMWEQSEKVLAEMEDGR---CKPNELTYCSLLHAY-ANGKEIGLMHSLAEEVYSGVIEP 592
Query: 239 -------------RC--------LFKQMVNDGIEPDIFSLNSMIKGY---ILSNHVNDAL 274
+C F ++ G PDI +LNSM+ Y + N+ L
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVL 652
Query: 275 RIFHQMG-----VVYNYL--------------------------PNSFSYDYLIHGLCAQ 303
+ G YN L P+ SY+ +I+ C
Sbjct: 653 DYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRN 712
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
R ++A + EM+ G VP +YN+ + + A + EE + + MI+ + TY
Sbjct: 713 TRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Query: 364 RTVLDEICRRGRAGEAMKLLKELQN 388
+++D C+ R EA +++L+N
Sbjct: 773 NSIVDGYCKLNRKDEAKLFVEDLRN 797
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I L +GR +A L + ++ GF SY SL+SA A +G E V +M E+
Sbjct: 179 VISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEG 238
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLL 401
ITY +L+ + G + L E + I D YTY L+
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 16/272 (5%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R + Y + L K+ E D+ ++M A F YNT+I F A +L A
Sbjct: 147 RPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNV-ITYNTLICAFCLAGQLMGAF 205
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ M +N+ P + +++IL A GKN + +F MV G+ P+
Sbjct: 206 SLLHEMI-LKNI--NPDVYTFSILIDALCKEGKNA----------KQIFHAMVQMGVNPN 252
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
++S N MI G V++A+ + +M + N +P++ +Y+ LI GLC GR +A L
Sbjct: 253 VYSYNIMINGLCKCKRVDEAMNLLREM-LHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 311
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+EM +G +Y SL+ AL N +++ +M E+ TY ++D +C+
Sbjct: 312 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 371
Query: 374 GRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
GR A +L + L K ID +TYT ++ L
Sbjct: 372 GRLKNAQELFQHLLVKGCCIDVWTYTVMISGL 403
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +++ G P+ + +++KG L V L FH V + N SY L++GL
Sbjct: 67 LLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLH-FHDKVVAQAFQTNQVSYGTLLNGL 125
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G T+ A +L ++ + P+ Y++++ L + V E EM ++ +
Sbjct: 126 CKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNV 185
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
ITY T++ C G+ A LL E+ KN+ D YT++ L+D L
Sbjct: 186 ITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDAL 230
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 10/173 (5%)
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY--NYLPNSF 291
Y T+ L KQM GIE ++ +L+ +I + H+ F +G + Y PN+
Sbjct: 25 YYLTVISLSKQMDVKGIEQNLVTLSILINCFC---HLGQMAFSFSLLGKILKLGYXPNTI 81
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
++ L+ GLC +G K D++ + F + SY +L++ L GE +K L M
Sbjct: 82 TWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIK-LLRM 140
Query: 352 IEKQ--RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
IE + RP + + Y ++D +C+ EA L E+ + + + TY L+
Sbjct: 141 IEDRSTRP-NVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLI 192
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 14/271 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F+ + TY + L + E ++ ++M+ T YN++I+ KL
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMI-TKGISPNIVTYNSLIHGLC---KLCEW 201
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+V M + + P + + N + A G + V M++ G+EP
Sbjct: 202 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDV--------VDMMIHRGVEP 253
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + N+++ G+ L N V+ A+++F M V + + N SY+ LI+G C A L
Sbjct: 254 NVVTYNALMDGHCLRNEVDVAVKVFDTM-VHKDCVANVISYNTLINGYCKIQSVDKAMYL 312
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+EM R+ P++ +YN+L+ L G +++ + EM+ + + D +TYRT+ D +C+
Sbjct: 313 FEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCK 372
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+AM LLK ++ N D YT +LD
Sbjct: 373 NRHLDKAMALLKAIEGSNWDPDIQIYTTILD 403
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 22/245 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I+ + + M NS+ + P++ ++ + A G + V
Sbjct: 676 YNSLIHALCNLCEWKHVTTLLNEMVNSKIM---PNVVVFSTVVDALCKEGMIAIAHDV-- 730
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
M+ G+EPD+ + +++ G+ L + +++A+++F M V +PN SY+
Sbjct: 731 ------VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM-VHKGCVPNVRSYNI 783
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C R A L ++M +G + + +YN+L+ L G ++ + EM+
Sbjct: 784 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 843
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVLE 405
+ D +TYR +LD +C+ EAM LLK ++ NL IDG L+
Sbjct: 844 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAAR 903
Query: 406 DDFGN 410
D F N
Sbjct: 904 DLFSN 908
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 10/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PS +N L T+ +++ K + T+ L +QM + GI PD+++L +I N
Sbjct: 43 PSTVDFNRLLTS-IAKTK-------HHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLN 94
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V+ A ++ + + P++ ++ LI GLC +G+ A L D+M +GF P+ +Y
Sbjct: 95 RVDFAFSALAKI-LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTY 153
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L++ L + +V E EMI K + +TY +++ +C+ L+ E+ +
Sbjct: 154 GTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 213
Query: 389 KNLI-DGYTYTKLLDVL 404
++ D +T ++D L
Sbjct: 214 SKIMPDVFTLNTVVDAL 230
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 13/256 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + L ++ + ++N+M+ + +++T++ + ++ A V
Sbjct: 672 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNS-KIMPNVVVFSTVVDALCKEGMIAIAHDV 730
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M R +E P + +Y L R + M+ +F MV+ G P++
Sbjct: 731 VDMMIK-RGVE--PDVVTYTALMDGHCLRSE--------MDEAVKVFDTMVHKGCVPNVR 779
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N +I GY ++ A+ + QM + + ++ +Y+ LIHGLC GR ++A L E
Sbjct: 780 SYNILINGYCQIQRMDKAMGLLEQMSL-QGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 838
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G +P +Y L+ L N + E + L + D + Y +D +CR G
Sbjct: 839 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 898
Query: 376 AGEAMKLLKELQNKNL 391
A L L +K L
Sbjct: 899 LEAARDLFSNLSSKGL 914
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + + + + +A+Y+F+ M SR E P+ +YN L G+ +
Sbjct: 293 YNTLINGYCKIQSVDKAMYLFEEM--SRQ-ELTPNTVTYNTLIHGLCHVGR--------L 341
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF +MV G PD+ + ++ + H++ A+ + + N+ P+ Y
Sbjct: 342 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG-SNWDPDIQIYTT 400
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ G+C G ++AR+L + KG P+ +YN ++ L G + E K EM +
Sbjct: 401 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 460
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
+ TY + R A ++LL+E+ + +D T T L+ +L DD
Sbjct: 461 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDD 513
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 12/204 (5%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
++ AV VF M + C P++RSYNIL N Y M+ L +QM
Sbjct: 758 EMDEAVKVFDTMVHKG---CVPNVRSYNILI--------NGYCQIQRMDKAMGLLEQMSL 806
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G+ D + N++I G + A+ +FH+M V +P+ +Y L+ LC
Sbjct: 807 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM-VASGQIPDLVTYRILLDYLCKNHHLA 865
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A L ++ YN + + GE+E + K D TY ++
Sbjct: 866 EAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 925
Query: 368 DEICRRGRAGEAMKLLKELQNKNL 391
+C+RG EA KL +++ ++
Sbjct: 926 HGLCKRGLLDEANKLFRKMDENDI 949
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ L QM + GI PD+++LN +I + + A + ++ + + P+ +Y L
Sbjct: 599 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKL-LKLGFQPDVVTYGTL 657
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
++GLC +M KG P +YNSL+ AL E + L EM+ +
Sbjct: 658 MNGLC-------------KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 704
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ + + TV+D +C+ G A ++ + + + D TYT L+D
Sbjct: 705 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMD 751
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 21/229 (9%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTI 179
LF S+Q + TY+ + L Q+ + ++M+A P Y T+
Sbjct: 312 LFEEMSRQ-ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL----VTYRTL 366
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ + R L +A+ + K ++ S P I+ Y + G+ +E R
Sbjct: 367 SDYLCKNRHLDKAMALLKAIEGSN---WDPDIQIYTTILDGMCRAGE--------LEDAR 415
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
LF + + G++P++++ N MI G + +A ++F +M PN +Y+ + G
Sbjct: 416 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK-NGCSPNDCTYNLITRG 474
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
EL +EM +GF + LV L+ +G ++++VK +
Sbjct: 475 FLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG-LDQSVKQI 522
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 136/272 (50%), Gaps = 22/272 (8%)
Query: 138 STYHIMTRKL----GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+TY+++ L + Y+ ++++ + LA F YN +I + + +A+
Sbjct: 622 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT-----YNILINGHCKEGNVKKAL 676
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F+ M SR R ++ +Y L A +G+ ET + LF + V GI PD
Sbjct: 677 EIFENM--SRR-GVRATVVTYTALIYALSKKGQ-------VQETDK-LFDEAVRRGIRPD 725
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ N++I + S +++ A I +M P+ +Y+ L+ GLC GR AR+L
Sbjct: 726 LVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 784
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM +G P +YN+L+S ++ G+V++ ++ EM+ K +TY ++ +C+
Sbjct: 785 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 844
Query: 374 GRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
G+ +A ++KE+ +N D TY L++ L
Sbjct: 845 GQGDDAENMVKEMVENGITPDDSTYISLIEGL 876
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 133/299 (44%), Gaps = 37/299 (12%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R +A TY+ + + Q D++ +M + Y T+I + + ++ AV
Sbjct: 511 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 570
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTYI 230
VF M E +P YN L + +GK N +
Sbjct: 571 KVFDEMLTKG--EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 628
Query: 231 NHVYMETIRC----LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV 283
+ ++M+ L ++M G+ PD+F+ N +I G+ +V AL IF M GV
Sbjct: 629 HALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 688
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+ +Y LI+ L +G+ + +L DE R+G P YN+L+++ + +G ++
Sbjct: 689 ATVV----TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 744
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ + EM +K+ D +TY T++ +C GR EA KL+ E+ + + D TY L+
Sbjct: 745 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 803
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A K +RA+ + + M RP+ +YN + F SRG+ +
Sbjct: 486 FNIMLRHLCSAGKPARALELLRQMP-------RPNAVTYNTVIAGFCSRGRV----QAAL 534
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +R + ++ GI P+ ++ ++I G+ V++A+++F +M P + Y+
Sbjct: 535 DIMREMRER---GGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 591
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C QG+ A D M +G + +YN LV AL ++G E + + EM K
Sbjct: 592 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 651
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL-------DVLEDD 407
D TY +++ C+ G +A+++ + + + + TYT L+ V E D
Sbjct: 652 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 711
Query: 408 --FGNSIRHHLR 417
F ++R +R
Sbjct: 712 KLFDEAVRRGIR 723
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 20/224 (8%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALY 176
LE+F S++ R TY + L QE D + ++ + P LY
Sbjct: 675 ALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL----VLY 729
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +I + + + RA + M+ R P +YN L G+ ++
Sbjct: 730 NALINSHSTSGNIDRAFEIMGEMEKKR---IAPDDVTYNTLMRGLCLLGR--------VD 778
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
R L +M GI+PD+ + N++I GY + V DALRI ++M + + P +Y+ L
Sbjct: 779 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM-MNKGFNPTLLTYNAL 837
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
I GLC G+ +A + EM G P +Y SL+ L E
Sbjct: 838 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 114/230 (49%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I +F + +L A+ +F+ MK + P +Y L A G+ +
Sbjct: 103 YNVLIRYFGRSGQLDSAMEMFREMKIKGS---EPDEYTYGFLVNALGKAGR--------V 151
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R F M+ G+ P+I + N ++ + ++ AL +F +M + P+ +Y+
Sbjct: 152 QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKR-RGFQPSVVTYNI 210
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ LC+ GR AR+L +M G P S +Y++LV+ L +G VEE K EM+++
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
VD + Y ++L + + G KL+KE+ K D +++ ++D L
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDAL 320
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 137/285 (48%), Gaps = 25/285 (8%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEAR 187
K+ F+ TY+I+ L +A + ++M T C ++ Y+T++ ++
Sbjct: 197 KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKM--TGDGCSPDSYTYSTLVNGLGKSG 254
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
++ A VF+ M + R + + +YN L A L++ N M+ + L K+M
Sbjct: 255 RVEEAHKVFREMVD-RGVAV--DLVNYNSLL-ATLAKAGN-------MDRVWKLMKEMSR 303
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G PD FS N+++ +N + A +F +M V P+ SY+ LI G
Sbjct: 304 KGFHPDAFSFNTIMDALGKANKPDAAREVFARM-VESGCKPDLISYNILIDSYARFGDAA 362
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
AR++ +EM GF+P +K+YNSL+ LA +G+V+E L EM D +TY ++
Sbjct: 363 QARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLM 422
Query: 368 DEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLD 402
D + +RG A +L +++++K + IDG + LD
Sbjct: 423 DMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLD 467
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 110/229 (48%), Gaps = 10/229 (4%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
NT++ + +++ F + + C P++ ++ L ++ G+ E
Sbjct: 31 NTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGE--------FE 82
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
++K++V G + D F+ N +I+ + S ++ A+ +F +M + + P+ ++Y +L
Sbjct: 83 RAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSE-PDEYTYGFL 141
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
++ L GR + AR D M +G P+ +YN L+ A G+++ + EM +
Sbjct: 142 VNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGF 201
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+TY +LD +C GR G A KL ++ D YTY+ L++ L
Sbjct: 202 QPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGL 250
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 13/252 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D+ TY + LG + +E V +M+ YN+++ A+A + R V
Sbjct: 239 DSYTYSTLVNGLGKSGRVEEAHKVFREMVDR-GVAVDLVNYNSLLATLAKAGNMDR---V 294
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+K MK P S+N + A K + R +F +MV G +PD+
Sbjct: 295 WKLMKEMSRKGFHPDAFSFNTIMDALGKANKP--------DAAREVFARMVESGCKPDLI 346
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N +I Y A ++ +M V ++P + +Y+ LIH L G+ A + +E
Sbjct: 347 SYNILIDSYARFGDAAQARQMLEEM-VEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEE 405
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+ G P +YN L+ L GE + + +M +K D ++Y +D + R
Sbjct: 406 METAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDR 465
Query: 376 AGEAMKLLKELQ 387
EA+ L K+++
Sbjct: 466 LDEALVLFKDMK 477
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NTI+ +A K A VF M S C+P + SYNIL ++ G
Sbjct: 313 FNTIMDALGKANKPDAAREVFARMVES---GCKPDLISYNILIDSYARFGDAA------- 362
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
R + ++MV G P+ + NS+I V++A + +M P+ +Y+
Sbjct: 363 -QARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA-GCRPDVVTYNR 420
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ L +G + A L +MK KG P + SY + LA + ++E + +M
Sbjct: 421 LMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG 480
Query: 356 RPVDFITYRTVLDEICRRG 374
PVD YR ++ R G
Sbjct: 481 CPVDKAMYRILIRAAHRAG 499
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 85/207 (41%), Gaps = 39/207 (18%)
Query: 235 METIRCLFKQMVNDG--IEPDIFSLNSMIKGYILSNHVNDALRIFHQ------------- 279
++ + L K+MV +G + P+ +L +I Y N DA +F+Q
Sbjct: 11 LDPLETLLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68
Query: 280 ---------------MGVVYNYLP------NSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+VY L + F+Y+ LI G+ +A E+ EMK
Sbjct: 69 TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG P +Y LV+AL G V+E M+E+ + TY ++D + G+
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188
Query: 379 AMKLLKELQNKNLIDG-YTYTKLLDVL 404
A+ L E++ + TY LLD L
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDAL 215
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 121/240 (50%), Gaps = 14/240 (5%)
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
L +PS +AL +T I + ++ + A +FK MK L RP++ + N L + +
Sbjct: 130 LTSPS----KALLDTAIGAYVQSGQPHHAFQIFKKMKR---LRLRPNLLTCNTLLNSLVR 182
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
Y + + R F + GI P++ + N +I GY L N DA+ + MG
Sbjct: 183 -----YPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGK- 236
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
YN P++ +Y+ ++ LC +GR +AR+L +MK +G +P+ +YN LV G ++E
Sbjct: 237 YNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKE 296
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ M + D TY +++ +C GR EA KL E++N L+ D +Y L++
Sbjct: 297 AANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLIN 356
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 19/230 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++Y + + L A V + M + L P + +YN+L + G+ +
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLL---PDVWTYNMLINGLCNEGR--------I 329
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
E L +M N + PD+ S N++I G + + +++A ++ +M GV PN+ +
Sbjct: 330 EEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVK----PNAVT 385
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
++ ++ C +G+ +A +M+ GF P +YN+L++ G + E + + EM
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLL 401
K +D +T T+L +CR + EA KLL + + ID +Y L+
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTI+ + +L A + MK SR L P+ +YNIL + G ++
Sbjct: 246 YNTILDALCKKGRLGDARDLLMDMK-SRGL--LPNRNTYNILVYGYCKMG--------WL 294
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + M + + PD+++ N +I G + +A ++ +M + LP+ SY+
Sbjct: 295 KEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL-KLLPDVVSYNT 353
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G + A +L +EM KG P++ ++N +V G++++ + +M E
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +TY T+++ C+ G GEA + + E+ KN+ +D T +L L
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 126/285 (44%), Gaps = 26/285 (9%)
Query: 129 KQPRFRHDASTYHIMTR---KLG-AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFA 184
++ F D TY+ + K G + ++ MD++ + + S NTI+
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT-----LNTILRTLC 464
Query: 185 EARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQ 244
+KL A +K + ++R SY L + G ++ L+ +
Sbjct: 465 REKKLEEA---YKLLSSARKRGYFIDEVSYGTLIVGYFKDGN--------VDRALKLWDE 513
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M I P + N +I G A+ +++ + LP+ +Y+ ++HG C +G
Sbjct: 514 MKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL-LESGLLPDETTYNTILHGYCREG 572
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK--NLWEMIEKQRPVDFIT 362
+ A + ++M F P + N L+ L + G +E+ +K N W + K + +D +T
Sbjct: 573 DVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTW--VSKGKAIDTVT 630
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
Y T++ +C+ GR +A LL E++ K L D YTY ++ L D
Sbjct: 631 YNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTD 675
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 13/260 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D+ T + + R L K +E +++ F E Y T+I + + + RA
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFID-EVSYGTLIVGYFKDGNVDRA 507
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ ++ MK E PS +YN + GK E +++ G+ P
Sbjct: 508 LKLWDEMKEK---EIIPSTVTYNCIIGGLCQCGKT--------EQAISKLNELLESGLLP 556
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D + N+++ GY V A + FH V ++ P+ F+ + L+ GLC +G + A +L
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQ-FHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKL 615
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+ KG + +YN+L+++L G +++ L EM EK+ D TY ++ +
Sbjct: 616 FNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTD 675
Query: 373 RGRAGEAMKLLKELQNKNLI 392
GR EA + + ++ K +
Sbjct: 676 SGRIREAEEFMSKMLEKGXL 695
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 26/267 (9%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + L ++ +N++L + E YNTI++ + + +A F++
Sbjct: 525 TYNCIIGGLCQCGKTEQAISKLNELLES-GLLPDETTYNTILHGYCREGDVEKA---FQF 580
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+P + + NIL G +E LF V+ G D + N
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEG--------MLEKALKLFNTWVSKGKAIDTVTYN 632
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I ++DA + +M P+ ++Y+ +I L GR + A E +M
Sbjct: 633 TLITSLCKEGRLDDAFNLLSEMEE-KELGPDHYTYNAIITALTDSGRIREAEEFMSKMLE 691
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG +P L + ETV + ++ + Y + E+C G+ +
Sbjct: 692 KGXLPXQ----------VLQLDXNETV--VTSETSEESDSSSVAYSEWIKELCTEGKYKD 739
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLDVL 404
AM++ E + K + +D TY L+D L
Sbjct: 740 AMRIFGESKQKGITVDKSTYINLMDGL 766
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 154/306 (50%), Gaps = 23/306 (7%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQ--PRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM 163
++ +M ++D + +F+ A+ + + HD S++ M +L +A ++ +D+V +M
Sbjct: 18 QVIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKAAEDIVARM 77
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
+ +E + +I + + ++ VF MK+ +C PS ++Y + +
Sbjct: 78 -KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKD---FDCDPSQKAYVTVLAILVE 133
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA-LRIFHQMGV 282
+ +N + +K M G+ P + SLN +IK ++ DA L+IFH+M
Sbjct: 134 ENQ---LNLAFK-----FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPK 185
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
P+S++Y LI GLC GR A++L EM K P+ +Y SL++ L + V+
Sbjct: 186 -RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK----NLIDGYTYT 398
E ++ + EM K + TY +++D +C+ GR+ +AM+L + + + N++ TYT
Sbjct: 245 EAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV---TYT 301
Query: 399 KLLDVL 404
L+ L
Sbjct: 302 TLITGL 307
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 100/237 (42%), Gaps = 20/237 (8%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T Y ++I ++ + A+ +Y++ + P++ +Y+ L G++
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAM---RYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQA- 281
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
ME LF+ M+ G P++ + ++I G + +A+ + +M + P++
Sbjct: 282 ---ME----LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNL-QGLKPDAG 333
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS-------KSYNSLVSALALNGEVEET 344
Y +I G CA + + A DEM G P+ K+ N +V L N
Sbjct: 334 LYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAF 393
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
L M + V+ T +++ +C++G +A++L+ E+ I KLL
Sbjct: 394 TLYL-SMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLL 449
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 22/245 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++++ + + M NS+ L P + ++ + A GK T + +
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKIL---PDVVIFSTVVDALCKEGKVTEAHEIV- 298
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
M+ G+EPD+ + +++ G+ L + +++A+++F M V + P+ SY
Sbjct: 299 -------DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM-VRKGFAPDVISYTT 350
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C + A L +EM RK ++P +K+YN+L+ L G +++ + EM+ +
Sbjct: 351 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARG 410
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVLE 405
+ D +TY +LD +C+ EAM LLK ++ NL IDG L+
Sbjct: 411 QMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAAR 470
Query: 406 DDFGN 410
D F N
Sbjct: 471 DLFSN 475
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 118/256 (46%), Gaps = 13/256 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + L ++ + ++NQM+ + +++T++ + K++ A +
Sbjct: 239 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDV-VIFSTVVDALCKEGKVTEAHEI 297
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M R +E P + +Y L + + M+ +F MV G PD+
Sbjct: 298 VDMMIQ-RGVE--PDVVTYTTLM--------DGHCLQSEMDEAVKVFDMMVRKGFAPDVI 346
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S ++I GY + ++ A+ +F +M ++P++ +Y+ L++GLC GR ++A L E
Sbjct: 347 SYTTLINGYCKIHKIDKAMYLFEEM-CRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHE 405
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +G +P +Y+ L+ +L N +EE + L + D Y ++D +CR G
Sbjct: 406 MVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 465
Query: 376 AGEAMKLLKELQNKNL 391
A L L +K L
Sbjct: 466 LEAARDLFSNLSSKGL 481
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 2/169 (1%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ L QM + G+ P++++LN +I + N V A + ++ + + P+ ++ L
Sbjct: 83 TVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKI-LKLGHQPDPTTFTTL 141
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GLC +G+ A L D+M +GF P+ +Y +L++ L G ++ L M +
Sbjct: 142 IRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNC 201
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D + Y +++D +C+ + EA L ++ + + D +TYT L+ L
Sbjct: 202 QPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 250
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 14/258 (5%)
Query: 152 MYQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
+ EMD+ V M+ F Y T+I + + K+ +A+Y+F+ M E P
Sbjct: 322 LQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK---EWIP 378
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
++YN L G+ ++ LF +MV G PD+ + + ++ + H
Sbjct: 379 DTKTYNTLMYGLCHVGR--------LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRH 430
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ +A+ + + N P+ Y+ +I G+C G + AR+L + KG PS +YN
Sbjct: 431 LEEAMALLKAI-EASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYN 489
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
++ L G + E K EM D TY T+ + A++LL+E+ +
Sbjct: 490 IMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR 549
Query: 390 NLIDGYTYTKLLDVLEDD 407
+ L + EDD
Sbjct: 550 GFSADSCFLMLSVLSEDD 567
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+I K+ A+++F M + +P++ +Y L G +
Sbjct: 138 FTTLIRGLCVEGKIGEALHLFDKMIDE---GFQPNVVTYGTLINGLCKVGNTS------- 187
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
IR L + M +PD+ S+I V +A +F QM V P+ F+Y
Sbjct: 188 AAIR-LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQM-VGQGISPDIFTYTS 245
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+H LC K+ L ++M +P ++++V AL G+V E + + MI++
Sbjct: 246 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 305
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +TY T++D C + EA+K+ + K D +YT L++
Sbjct: 306 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLIN 353
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 135/320 (42%), Gaps = 48/320 (15%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
E F WA +Q R+RH + M L +++ VV M+ GTE + ++
Sbjct: 111 FEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQ-FAQLM 169
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
++ A KL A+ V M+ C P I N+ + G+ ++
Sbjct: 170 LSYSRAGKLRSAMRVLHLMQKD---GCAPDISICNMAVNVLVVAGR--------VDKALE 218
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG------------VVYNYL- 287
++M G+EPD+++ N +IKG + V DA+ + M V ++L
Sbjct: 219 FAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLC 278
Query: 288 ----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
P+ +Y+ LIHGL G A E E + K F
Sbjct: 279 KEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDE 338
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
Y+++V + LNG + E + + EMI K D +TY TV+D CR G +A K++K
Sbjct: 339 VGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKH 398
Query: 386 L-QNKNLIDGYTYTKLLDVL 404
+ +N + T+T LL+ L
Sbjct: 399 MYKNDCKPNTVTHTALLNGL 418
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 121/271 (44%), Gaps = 17/271 (6%)
Query: 124 FNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYF 182
F S+ RFR D Y + E ++V +M++ C + + Y+T++
Sbjct: 325 FLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKG--CQPDVVTYSTVVDG 382
Query: 183 FAEARKLSRAVYVFKYM-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
F +L +A + K+M KN +C+P+ ++ L GK + L
Sbjct: 383 FCRIGELDQARKMMKHMYKN----DCKPNTVTHTALLNGLCKVGKTSEAWE--------L 430
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+ + P + + ++ G+ + ++ + QM + + P + + LIH LC
Sbjct: 431 LNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQM-LQKGFFPTTVEINLLIHALC 489
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+ A++ ++ + KG + ++ +++ + G++E + + +M R D +
Sbjct: 490 KDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVV 549
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
TY V+D + ++GR EA L++++ N+ ++
Sbjct: 550 TYTVVVDALGKKGRLKEATGLVEKMLNRGVL 580
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ + KL +A +M+ L +P++ SYN + + SRG +
Sbjct: 252 FNIMVNVLCKEGKLKKAREFIGFMEG---LGFKPNVVSYNTIIHGYSSRGN--------I 300
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R + M GIEPD ++ S+I G + +A +F +M V +PN+ +Y+
Sbjct: 301 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM-VEIGLVPNAVTYNT 359
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G + A DEM +KG +PS +YN LV AL + G + E + EM +K
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
D ITY +++ R G A +A L E+ +K + + TYT L+ VL
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 469
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
STY+++ L E DD++ +M YN +I ++ +A +
Sbjct: 389 VSTYNLLVHALFMEGRMGEADDMIKEM-RKKGIIPDAITYNILINGYSRCGNAKKAFDLH 447
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M S+ +E P+ +Y L R + M+ LF+++++ G+ PD+
Sbjct: 448 NEML-SKGIE--PTHVTYTSLIYVLSRRNR--------MKEADDLFEKILDQGVSPDVIM 496
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N+M+ G+ + +V A + +M + P+ +++ L+ G C +G+ + AR L DEM
Sbjct: 497 FNAMVDGHCANGNVERAFMLLKEMDR-KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 555
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
KR+G P SYN+L+S G++++ + EM+ +TY ++ +C+
Sbjct: 556 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEG 615
Query: 377 GEAMKLLKELQNKNL-IDGYTYTKLLD 402
A +LLKE+ NK + D TY L++
Sbjct: 616 DLAEELLKEMVNKGISPDDSTYLSLIE 642
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 13/227 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N ++ F + ++ A ++ M L ++ ++NI+ GK ++
Sbjct: 218 NDMLSLFLKLNRMEMAWVLYAEM---FRLRISSTVYTFNIMVNVLCKEGK--------LK 266
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
R M G +P++ S N++I GY ++ A RI M V P+S++Y L
Sbjct: 267 KAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV-KGIEPDSYTYGSL 325
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I G+C +GR + A L D+M G VP++ +YN+L+ G++E EM++K
Sbjct: 326 ISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 385
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
TY ++ + GR GEA ++KE++ K +I D TY L++
Sbjct: 386 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 432
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTII+ ++ + A + M+ + +E P +Y L + G+ +
Sbjct: 287 YNTIIHGYSSRGNIEGARRILDAMR-VKGIE--PDSYTYGSLISGMCKEGR--------L 335
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF +MV G+ P+ + N++I GY + A +M V +P+ +Y+
Sbjct: 336 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM-VKKGIMPSVSTYNL 394
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+H L +GR A ++ EM++KG +P + +YN L++ + G ++ EM+ K
Sbjct: 395 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 454
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+TY +++ + RR R EA L +++ ++ +
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 22/212 (10%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY + L +E DD+ ++L +P ++N ++ + RA +
Sbjct: 461 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI----MFNAMVDGHCANGNVERAFML 516
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
K M P ++N L GK +E R L +M GI+PD
Sbjct: 517 LKEMDRK---SVPPDEVTFNTLMQGRCREGK--------VEEARMLLDEMKRRGIKPDHI 565
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N++I GY + DA R+ +M + + P +Y+ LI LC A EL E
Sbjct: 566 SYNTLISGYGRRGDIKDAFRVRDEM-LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 624
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
M KG P +Y SL+ + G V+ V++
Sbjct: 625 MVNKGISPDDSTYLSLIEGM---GNVDTLVED 653
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS L N I KL F+ R
Sbjct: 148 KEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYI-------KLGDLDEGFRLKNAMRAS 200
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L + M+ LF +M+++G+ P+ + ++I G+
Sbjct: 201 GVQPDVYTYSVLINGLCKESR--------MDEANGLFGEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ ++ A+ I+ QM + + P+ +Y+ LI+GLC +G K AR L DEM RKG P
Sbjct: 253 KNGRLDLAMDIYRQM-LNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GRA +A K+L+E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLRE 371
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ L D TYT +++
Sbjct: 372 MLRVGLKPDDETYTMIMN 389
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF--------------------HQMGVVY-------- 284
DI+ + +I Y+ S + DA+ F H M Y
Sbjct: 65 DIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFY 124
Query: 285 ------NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C +G + A+ + D + + G PS S+N+L++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M D TY +++ +C+ R EA L E+ + L+ +G T+
Sbjct: 185 GDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTF 244
Query: 398 TKLLD 402
T L+D
Sbjct: 245 TTLID 249
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 13/166 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
D+ QML F YNT+IY + L +A Y+ M +P +Y L
Sbjct: 262 DIYRQML-NQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRK---GLKPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET L ++M+ + I D ++I G DA ++
Sbjct: 318 IDGSCKEGD--------LETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+M V P+ +Y +++ C +G K A EL EM+R G VP
Sbjct: 370 REMLRV-GLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVP 414
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 135/320 (42%), Gaps = 48/320 (15%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
E F WA +Q R+RH + M L +++ VV M+ GTE + ++
Sbjct: 111 FEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQ-FAQLM 169
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
++ A KL A+ V M+ C P I N+ + G+ ++
Sbjct: 170 LSYSRAGKLRSAMRVLHLMQKD---GCAPDISICNMAVNVLVVAGR--------VDKALE 218
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG------------VVYNYL- 287
++M G+EPD+++ N +IKG + V DA+ + M V ++L
Sbjct: 219 FAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLC 278
Query: 288 ----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
P+ +Y+ LIHGL G A E E + K F
Sbjct: 279 KEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDE 338
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
Y+++V + LNG + E + + EMI K D +TY TV+D CR G +A K++K
Sbjct: 339 VGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKH 398
Query: 386 L-QNKNLIDGYTYTKLLDVL 404
+ +N + T+T LL+ L
Sbjct: 399 MYKNDCKPNTVTHTALLNGL 418
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 121/271 (44%), Gaps = 17/271 (6%)
Query: 124 FNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYF 182
F S+ RFR D Y + E ++V +M++ C + + Y+T++
Sbjct: 325 FLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKG--CQPDVVTYSTVVDG 382
Query: 183 FAEARKLSRAVYVFKYM-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
F +L +A + K+M KN +C+P+ ++ L GK + L
Sbjct: 383 FCRIGELDQARKMMKHMYKN----DCKPNTVTHTALLNGLCKVGKTSEAWE--------L 430
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+ + P + + ++ G+ + ++ + QM + + P + + LIH LC
Sbjct: 431 LNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQM-LQKGFFPTTVEINLLIHALC 489
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+ A++ ++ + KG + ++ +++ + G++E + + +M R D +
Sbjct: 490 KDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVV 549
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
TY V+D + ++GR EA L++++ N+ ++
Sbjct: 550 TYTVVVDALGKKGRLKEATGLVEKMLNRGVL 580
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 126/253 (49%), Gaps = 15/253 (5%)
Query: 153 YQEMDDVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
Y+ MDD + + T YN++I + S A + M + P+
Sbjct: 269 YKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK---INPN 325
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ ++N L AF GK +E + LF +M+ I+P+I + NS+I G+ + + +
Sbjct: 326 VVTFNSLIDAFAKEGK-------LIEAEK-LFDEMIQRSIDPNIVTYNSLINGFCMHDRL 377
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
++A +IF M V + LP+ +Y+ LI G C R + EL EM ++G V ++ +YN+
Sbjct: 378 DEAQQIFTLM-VSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 436
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ L G+ + K +M+ P D ITY +LD +C+ G+ +A+ + + LQ
Sbjct: 437 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 496
Query: 391 L-IDGYTYTKLLD 402
+ + YTY +++
Sbjct: 497 MEPNIYTYNIMIE 509
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 25/238 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F +A+++ + +F+ M + R L + +YN L G
Sbjct: 399 YNTLIKGFCKAKRVEEGMELFREM-SQRGL--VGNTVTYNTLIQGLFQAGD--------C 447
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL------PN 289
+ + +FK+MV+DG+ PDI + + ++ G + AL VV+ YL PN
Sbjct: 448 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL-------VVFEYLQKSKMEPN 500
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
++Y+ +I G+C G+ ++ +L + KG P+ Y +++S G EE
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 560
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
EM E D Y T++ R G + +L+KE+++ + D T + ++++L D
Sbjct: 561 EMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 618
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL AV +F M SR PSI ++ L +A K + + L +QM N
Sbjct: 61 KLDDAVALFGEMVKSRPF---PSIIEFSKLLSAIAKMNK--------FDVVISLGEQMQN 109
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI + ++ + ++ + + + AL + +M + Y P+ + L++G C R
Sbjct: 110 LGIPHNHYTYSILLNCFCRRSQLPLALAVLGKM-MKLGYEPDIVTLSSLLNGYCHGKRIS 168
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A L D+M G+ P + ++N+L+ L L+ + E V + M+ + D TY TV+
Sbjct: 169 EAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 228
Query: 368 DEICRRGRAGEAMKLLKELQNKNL 391
+ +C+RG A+ LLK+++ +
Sbjct: 229 NGLCKRGDIDLALSLLKKMEKGKI 252
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 16/211 (7%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
+ +++S AV + M + +P ++N L K + E + L
Sbjct: 161 YCHGKRISEAVALVDQM---VEMGYKPDTVTFNTLIHGLFLHNKAS-------EAV-ALI 209
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--GVVYNYLPNSFSYDYLIHGL 300
+MV G +PD+F+ +++ G ++ AL + +M G + N Y+ +I GL
Sbjct: 210 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE---ANVVIYNTIIDGL 266
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +A +L ++M+ KG P +YNSL+S L G + + L +MIE++ +
Sbjct: 267 CKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+T+ +++D + G+ EA KL E+ +++
Sbjct: 327 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 138/277 (49%), Gaps = 20/277 (7%)
Query: 131 PRFRHDASTYHIMT--RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
P F ++++ T ++ G + + +D++ N+ + P YN +I + +
Sbjct: 78 PCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKG-SKPDV----VTYNVLINGICKEGR 132
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L A+ K++ N + C+P++ ++NI+ + S G+ +M+ + L M+
Sbjct: 133 LDEAI---KFLNNMPSYGCQPNVITHNIILRSMCSTGR-------WMDAEK-LLSDMLRK 181
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G P + + N +I + A+ I +M + + PNS SY+ L+HG C + +
Sbjct: 182 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPM-HGCTPNSLSYNPLLHGFCKEKKMDR 240
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A E D M +G P +YN+L++AL +G+V+ V+ L ++ K ITY TV+D
Sbjct: 241 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVID 300
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ + G+ A+KLL E++ K L D TY+ L+ L
Sbjct: 301 GLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 337
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 54/292 (18%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
T++I+ R + + + + + +++ ML +PS +N +I F L RA+ +
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV----VTFNILINFLCRQGLLGRAIDI 209
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M C P+ SYN L F K M+ MV+ G PDI
Sbjct: 210 LEKMPMH---GCTPNSLSYNPLLHGFCKEKK--------MDRAIEYLDIMVSRGCYPDIV 258
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N+++ V+ A+ I +Q+ P +Y+ +I GL G+T+ A +L DE
Sbjct: 259 TYNTLLTALCKDGKVDVAVEILNQLSS-KGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 317
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVK----------------------NLWEMIE 353
M+RKG P +Y+SLVS L+ G+V+E +K L + +
Sbjct: 318 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 377
Query: 354 KQRPVDFI-------------TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
R +DF+ TY +++ I G A EA+ LL EL ++ L+
Sbjct: 378 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 6/196 (3%)
Query: 217 LFTAFLSRGKNTYINHVYMET----IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
LF F G + Y+ E+ L +M N G +PD+ + N +I G +++
Sbjct: 76 LFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 135
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A++ + M Y PN +++ ++ +C+ GR +A +L +M RKG PS ++N L+
Sbjct: 136 AIKFLNNM-PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILI 194
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ L G + + L +M + ++Y +L C+ + A++ L + ++
Sbjct: 195 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY 254
Query: 393 -DGYTYTKLLDVLEDD 407
D TY LL L D
Sbjct: 255 PDIVTYNTLLTALCKD 270
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS----RGKNTYIN 231
YNTII + R+++ A +F M P I +YN L A + + T +N
Sbjct: 255 YNTIIDSLCKDRQVTEAFNLFSEMITK---GISPDIFTYNSLIHALCNLCEWKHVTTLLN 311
Query: 232 H-----------VYMETIRCLFKQ------------MVNDGIEPDIFSLNSMIKGYILSN 268
V+ + L K+ M+ G+EPD+ + +++ G+ L +
Sbjct: 312 EMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRS 371
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A+++F M V +PN SY+ LI+G C R A L ++M +G + + +Y
Sbjct: 372 EMDEAVKVFDTM-VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTY 430
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+ L G ++ + EM+ + D +TYR +LD +C+ EAM LLK ++
Sbjct: 431 NTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEG 490
Query: 389 KNL----------IDGYTYTKLLDVLEDDFGN 410
NL IDG L+ D F N
Sbjct: 491 SNLDADILVYNIAIDGMCRAGELEAARDLFSN 522
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 13/227 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +I F R+L Y F + L C+P ++N L GK H
Sbjct: 151 NILINSFCHLRRLG---YAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALH---- 203
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
LF + + +G +PD+ + +++ G + + A+R+ M V N PN +Y+ +
Sbjct: 204 ----LFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSM-VQKNCRPNVIAYNTI 258
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I LC + A L EM KG P +YNSL+ AL E + L EM+ +
Sbjct: 259 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 318
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ + + TV+D +C+ G A ++ + + + D TYT L+D
Sbjct: 319 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMD 365
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ L QM + GI PD+++LN +I + + A + ++ + P++ +++ L
Sbjct: 130 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKL-LKLGCQPDNTTFNTL 188
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GLC +G+ A L D+ +GF P +Y +L++ L G ++ L M++K
Sbjct: 189 IRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNC 248
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ I Y T++D +C+ + EA L E+ K + D +TY L+ L
Sbjct: 249 RPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 297
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + + NIL +F + Y V +++ G +PD + N++I+G +
Sbjct: 145 PDVYTLNILINSFCHLRRLGYAFSV--------LAKLLKLGCQPDNTTFNTLIRGLCVEG 196
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ +AL +F + + + P+ +Y L++GLC G T A L M +K P+ +Y
Sbjct: 197 KIGEALHLFDKT-IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAY 255
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+++ +L + +V E EMI K D TY +++ +C LL E+ N
Sbjct: 256 NTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN 315
Query: 389 KNLI-DGYTYTKLLDVLEDDFGNSIRH 414
++ + ++ ++D L + +I H
Sbjct: 316 SKIMPNVVVFSTVVDALCKEGMIAIAH 342
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 109/251 (43%), Gaps = 13/251 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + L ++ + ++N+M+ + +++T++ + ++ A V
Sbjct: 286 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNS-KIMPNVVVFSTVVDALCKEGMIAIAHDV 344
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M R +E P + +Y L R + M+ +F MV+ G P++
Sbjct: 345 VDMMIK-RGVE--PDVVTYTALMDGHCLRSE--------MDEAVKVFDTMVHKGCVPNVR 393
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N +I GY ++ A+ + QM + + ++ +Y+ LIHGLC GR ++A L E
Sbjct: 394 SYNILINGYCQIQRMDKAMGLLEQMSL-QGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G +P +Y L+ L N + E + L + D + Y +D +CR G
Sbjct: 453 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 512
Query: 376 AGEAMKLLKEL 386
A L L
Sbjct: 513 LEAARDLFSNL 523
>gi|225466900|ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36240-like [Vitis vinifera]
Length = 588
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 55/293 (18%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATP--------SFCGT 172
L +F WA+ FRHD STY M + L + ++ ++ M++ P S +
Sbjct: 192 LHIFTWAATIDSFRHDQSTYEWMVKTLAITDRFDDLHSLLQGMVSNPCPYSDGIFSCPRS 251
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E ++ + F +L A F+ M+ R ++ +PS+ YNIL N Y+N
Sbjct: 252 EPIFRFALNAFCRVGRLEDAEISFESMR--RMIDGKPSVAMYNILI--------NGYVNC 301
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
E + ++++M+ D ++PD+F+ NS+I ++ AL +F
Sbjct: 302 REHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLALEMF--------------- 346
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
EMK KG P+ S+N+L+ + EE + +EM+
Sbjct: 347 ---------------------KEMKDKGCSPNVVSFNTLIKGSFRERKFEEGIGMAYEML 385
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
E +T ++D +CR GR EA LL + K L +G+ Y L++ L
Sbjct: 386 ELGCEFSNVTCEILVDGLCREGRVLEACDLLIDFSGKGALPNGFDYFCLIEAL 438
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L Q+ G P + + I+G +A ++ +M + LP+S + + L+ L
Sbjct: 450 LLDQLWRKGNAPSSIACTAFIEGLRRFRKTEEAFQLMEKM-LREGILPDSVTCNCLLQDL 508
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C GR+ A EL KG ++N LV+ + G+ +E + L EM++ D
Sbjct: 509 CEVGRSFEANELRLLASSKGLDSDGMTFNILVNGYSREGKRKEGKRLLNEMLDLGFIPDL 568
Query: 361 ITYRTVLDEICRRGRA 376
+Y +++ + G +
Sbjct: 569 ASYNRLMNGLSNGGSS 584
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 136/272 (50%), Gaps = 22/272 (8%)
Query: 138 STYHIMTRKL----GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+TY+++ L + Y+ ++++ + LA F YN +I + + +A+
Sbjct: 627 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT-----YNILINGHCKEGNVKKAL 681
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F+ M SR R ++ +Y L A +G+ ET + LF + V GI PD
Sbjct: 682 EIFENM--SRR-GVRATVVTYTALIYALSKKGQ-------VQETDK-LFDEAVRRGIRPD 730
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ N++I + S +++ A I +M P+ +Y+ L+ GLC GR AR+L
Sbjct: 731 LVLYNALINSHSTSGNIDRAFEIMGEMEK-KRIAPDDVTYNTLMRGLCLLGRVDEARKLI 789
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM +G P +YN+L+S ++ G+V++ ++ EM+ K +TY ++ +C+
Sbjct: 790 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 849
Query: 374 GRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
G+ +A ++KE+ +N D TY L++ L
Sbjct: 850 GQGDDAENMVKEMVENGITPDDSTYISLIEGL 881
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 39/313 (12%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R +A TY+ + + Q D++ +M + Y T+I + + ++ AV
Sbjct: 516 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 575
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTYI 230
VF M E +P YN L + +GK N +
Sbjct: 576 KVFDEMLTKG--EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 633
Query: 231 NHVYMETIRC----LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV 283
+ ++M+ L ++M G+ PD+F+ N +I G+ +V AL IF M GV
Sbjct: 634 HALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 693
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+ +Y LI+ L +G+ + +L DE R+G P YN+L+++ + +G ++
Sbjct: 694 ATVV----TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 749
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ + EM +K+ D +TY T++ +C GR EA KL+ E+ + + D TY L+
Sbjct: 750 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 809
Query: 403 --VLEDDFGNSIR 413
++ D +++R
Sbjct: 810 GYSMKGDVKDALR 822
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A K +RA+ + + M RP+ +YN + F SRG+ +
Sbjct: 491 FNIMLRHLCSAGKPARALELLRQMP-------RPNAVTYNTVIAGFCSRGRV----QAAL 539
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +R + ++ GI P+ ++ ++I G+ V++A+++F +M P + Y+
Sbjct: 540 DIMREMRER---GGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 596
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C QG+ A D M +G + +YN LV AL ++G E + + EM K
Sbjct: 597 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 656
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL-------DVLEDD 407
D TY +++ C+ G +A+++ + + + + TYT L+ V E D
Sbjct: 657 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 716
Query: 408 --FGNSIRHHLR 417
F ++R +R
Sbjct: 717 KLFDEAVRRGIR 728
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 20/224 (8%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALY 176
LE+F S++ R TY + L QE D + ++ + P LY
Sbjct: 680 ALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL----VLY 734
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +I + + + RA + M+ R P +YN L G+ ++
Sbjct: 735 NALINSHSTSGNIDRAFEIMGEMEKKR---IAPDDVTYNTLMRGLCLLGR--------VD 783
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
R L +M GI+PD+ + N++I GY + V DALRI ++M + + P +Y+ L
Sbjct: 784 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM-MNKGFNPTLLTYNAL 842
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
I GLC G+ +A + EM G P +Y SL+ L E
Sbjct: 843 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 149/329 (45%), Gaps = 60/329 (18%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYH----------------------------------- 141
P + ++ F+WA +Q ++HD +Y+
Sbjct: 7 PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFK 66
Query: 142 IMTR---KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
I+ R K G A E +++ P ++N +I+ + +AV +F+
Sbjct: 67 ILIRGNCKAGQAMRALEFLRALDEFSVAPDV----YIFNVLIHGLFKDGNPDQAVKLFEN 122
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE--PDIFS 256
M++SR +P I +YN + + G +E R L ++M+ G + PDI +
Sbjct: 123 MESSR---VKPEIVTYNTVISGLCKSGN--------LEKARELLEEMIRKGGKSAPDIVT 171
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N++I + ++ + +A +M P+ + + L+ G+C G + A E+ D M
Sbjct: 172 YNTLINAFYRASRIREACAFREKMKAA-GINPDVLTCNILVSGICKDGDVEEALEILDGM 230
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
K G VP +YNS++ AL + G+V E + L M P D +T+ T+LD C+ G
Sbjct: 231 KLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM--SCSP-DLVTFNTLLDGFCKAGML 287
Query: 377 GEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
A+++L+E+ +N++ D TYT L++ L
Sbjct: 288 PRALEVLEEMCRENILPDVITYTILVNGL 316
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 13/200 (6%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + +YN + A GK + ++T+ C PD+ + N+++ G+ +
Sbjct: 237 PDVITYNSIIHALCVAGKVVEAAEI-LKTMSC----------SPDLVTFNTLLDGFCKAG 285
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ AL + +M N LP+ +Y L++GLC G+ + A L +E+ R+G++P +Y
Sbjct: 286 MLPRALEVLEEM-CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAY 344
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
SLV L +GE+EE K + EM + + Y +++ CR G +A ++L E+ +
Sbjct: 345 TSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVS 404
Query: 389 KNLIDG-YTYTKLLDVLEDD 407
N++ +TY +L L D
Sbjct: 405 INMVPPLFTYNIVLGGLIKD 424
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
K +K CR + Y+ L + + G + R + +MV+ + P +F+
Sbjct: 362 KLVKEMSVRGCRTGVVMYSSLVSGYCRAGN--------VHKAREILAEMVSINMVPPLFT 413
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N ++ G I ++ A+ + + V Y+P+ +Y+ LI GLC R + A +L DEM
Sbjct: 414 YNIVLGGLIKDGSISKAVSLISDL-VARGYVPDVVTYNTLIDGLCKANRVREACDLADEM 472
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
+G P+ + S+V L G V++ + EM K+ + + Y +++D +C+ R
Sbjct: 473 ASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRM 532
Query: 377 GEAMKLLKELQNKNL-IDGYTYTKLL 401
+A +L ++ + + +D + Y KL+
Sbjct: 533 DDACMVLDAMRGQGVALDDFAYRKLI 558
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 16/230 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+II+ A K+ A + K M C P + ++N L F G V
Sbjct: 242 YNSIIHALCVAGKVVEAAEILKTMS------CSPDLVTFNTLLDGFCKAGMLPRALEV-- 293
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++M + I PD+ + ++ G V A + ++ V Y+P+ +Y
Sbjct: 294 ------LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI-VRQGYIPDVIAYTS 346
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC G + A +L EM +G Y+SLVS G V + + L EM+
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSIN 406
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
TY VL + + G +A+ L+ +L + + D TY L+D L
Sbjct: 407 MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGL 456
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 115/277 (41%), Gaps = 15/277 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y + L + +E +V +M G +Y++++ + A + +A +
Sbjct: 340 DVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGV-VMYSSLVSGYCRAGNVHKAREI 398
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M + + P + +YNI+ + G + L +V G PD+
Sbjct: 399 LAEMVS---INMVPPLFTYNIVLGGLIKDGS--------ISKAVSLISDLVARGYVPDVV 447
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N++I G +N V +A + +M PN + ++ GLC GR +A L E
Sbjct: 448 TYNTLIDGLCKANRVREACDLADEMAS-RGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVE 506
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M RK P+ Y SL+ L + +++ L M + +D YR ++ + GR
Sbjct: 507 MSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGR 566
Query: 376 AGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNSI 412
EAM + E+ + + + +K L+ E NS+
Sbjct: 567 VAEAMAMYDEMVARGFLPDGSTSKTLE--EAAMSNSV 601
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 9/103 (8%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
P++ S+I G S+ ++DA + M GV + F+Y LI + GR
Sbjct: 514 PNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALD----DFAYRKLIVSMSHGGRVAE 569
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET--VKNLW 349
A + DEM +GF+P + +L A N E T +N W
Sbjct: 570 AMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFEWTNLEENAW 612
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 130/271 (47%), Gaps = 20/271 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY+I+ L A + +++++M+ TP +N+I+ +A K RA
Sbjct: 260 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPD----TVTFNSIMDGLCKAGKFERA 315
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ M RN CRPS +YN L + L + +N ++ + L + V+ G P
Sbjct: 316 HSLLAVMAE-RN--CRPSCCTYNTLISG-LCKQQN-------VDRAKDLVDEFVSSGFVP 364
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + + + G +++A + +M PN +Y+ LI GLC +T+ A EL
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSG-KGCTPNLVTYNTLIDGLCKASKTEKAYEL 423
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+ + GFVP +Y +V L G +++ +K + M+++ ITY +++ +CR
Sbjct: 424 LESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCR 483
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
GR EA + KE+ +K+ D Y L++
Sbjct: 484 TGRVDEAHHIFKEMVSKDCTADALAYVSLVN 514
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 136/334 (40%), Gaps = 60/334 (17%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ +DP + F WA + F+H T + + L + + +ML +
Sbjct: 99 VLQRLKDPQTAIVFFVWAGDRG-FKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDA-GY 156
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
Y+ +I + ++ +A F + ++ +P + Y IL AF G+
Sbjct: 157 APDSYTYHLVIKSLCQMNQIDKA---FTMLDKAKVRGFKPEVSVYTILTRAFCKTGR--- 210
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
++ +F+ + + PD + N++I G+ N + AL +M P+
Sbjct: 211 -----LKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNE-RKVAPD 260
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
F+Y+ LI GLC +T A E+ EM +G P + ++NS++ L G+ E L
Sbjct: 261 VFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLA 320
Query: 350 EMIEKQ-RPV----------------------------------DFITYRTVLDEICRRG 374
M E+ RP D +TY + D +C+RG
Sbjct: 321 VMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRG 380
Query: 375 RAGEAMKLLKELQNK----NLIDGYTYTKLLDVL 404
R EA +L+KE+ K NL+ TY L+D L
Sbjct: 381 RIDEAFELVKEMSGKGCTPNLV---TYNTLIDGL 411
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 123/291 (42%), Gaps = 30/291 (10%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + L A ++ +++ ++++ F Y I+ + +L +A+ K
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSS-GFVPDVVTYTIIVDGLCKEGRLDKAL---KM 458
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI-------------------- 238
++ C PS+ +Y L G+ +H++ E +
Sbjct: 459 VEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCK 518
Query: 239 --RCLFKQMVNDGIE--PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
R Q V DGI P I N+++ GY +++ +F M +PN +Y+
Sbjct: 519 SSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMAC-RGCVPNIKTYN 577
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ GLC G+ A + M G VP SYN ++ L + +E + L +MI+
Sbjct: 578 IVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA 637
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
P D +TY T++ + C+ R +A+ +LK + + D TY L+ L
Sbjct: 638 GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 688
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 128/305 (41%), Gaps = 45/305 (14%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTII--------- 180
F D TY I+ L + +V ML TPS AL +
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 491
Query: 181 YFFAE-------ARKLSRAVYVFKYMKNSRNLECR---------PSIRSYNILFTAFLSR 224
+ F E A L+ V Y K+SR E + P I YN L +
Sbjct: 492 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 551
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMG 281
G+ ++ I +F+ M G P+I + N ++ G V++A L H G
Sbjct: 552 GR--------LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 603
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V P+ SY+ +I GL + K AR++ D+M + G P + +YN+L++
Sbjct: 604 CV----PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 659
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDG-YTYTK 399
++ V L MI+ D +TY T++ + + R G+A +L+ E L+N ++ TY
Sbjct: 660 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 719
Query: 400 LLDVL 404
++D L
Sbjct: 720 IIDRL 724
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 117/296 (39%), Gaps = 38/296 (12%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +Y+I+ L A +E V++QM+ YNT++ F + + AV +
Sbjct: 607 DVVSYNIIIDGLFKASKPKEARQVLDQMIQA-GIPPDAVTYNTLMAQFCKEERFDDAVGI 665
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGK------------------------NTYIN 231
K M + P +YN L + + NT I+
Sbjct: 666 LKNMIKA---GVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIID 722
Query: 232 HVYME----TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
+ E L M G+E + + N I +++A + +M + L
Sbjct: 723 RLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM----DTL 778
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ SY +I GLC + A +L EM KG +S ++N L+ A ++E +
Sbjct: 779 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 838
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
L M+++ ITY V+ +C+ + +A +L E+ + ++ +YT L+
Sbjct: 839 LLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI 894
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 109/257 (42%), Gaps = 18/257 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + L + +++++ML YNTII + L +A+ +
Sbjct: 677 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLL 736
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY--METIRCLFKQMVNDGIEPD 253
+M +E + +YNI G+ + + M+T+R D
Sbjct: 737 MDHM-TGHGVE--ANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR-------------D 780
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
S ++I G + ++ A ++ +M V S +++ LI R A L
Sbjct: 781 EVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
M ++G PS +YN +++ L +V++ + EM + ++Y ++ +C +
Sbjct: 841 GLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQ 900
Query: 374 GRAGEAMKLLKELQNKN 390
GR EA+++L+E+ + +
Sbjct: 901 GRGKEALQVLEEMASSD 917
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 119/238 (50%), Gaps = 13/238 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YN +I + A ++ A+ VF+ M +R C P++R+Y L GK
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNR---CSPNVRTYTELIHGLCKSGK------- 262
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+E LF +MV G+EP++ + ++I+G H+ A R+ H M +PN +++
Sbjct: 263 -VERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET-NGLVPNDWTF 320
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI LC + + + A+ + +KG + Y SL+ L G+++ + + +MI
Sbjct: 321 SVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMIS 380
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDFGN 410
+ D +Y +++D +CR+ + +A +L+++ K + TYT ++D L + G+
Sbjct: 381 EGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 16/270 (5%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA-RKLSRAVYV 195
A TY + L A M +E V M A T +Y T+++ EA R V +
Sbjct: 142 AFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTH-VYATMVHGLCEAGRTEEAEVLL 200
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M N P+I YN L + + G+ ME +F+ M + P++
Sbjct: 201 EEAMSNGF----EPNIVVYNALIDGYCNAGE--------MEHALKVFEGMDGNRCSPNVR 248
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +I G S V A+ +F +M V PN +Y LI G C +G + A L
Sbjct: 249 TYTELIHGLCKSGKVERAMVLFSRM-VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHL 307
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+ G VP+ +++ L+ AL +VEE L +++K V+ + Y +++D +C+ G+
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
A +L++++ ++ + D ++Y+ L+D L
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGL 397
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 27/263 (10%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
D + Q + + F Y+++I +KLS+A + + M + ++ P +Y I+
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME-KGIQASPV--TYTII 428
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+ + V E + +F +M+ GI PDI + ++ Y + DA +
Sbjct: 429 I--------DELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMI 480
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
QM V PN +Y+ LI G G A + M KG+ P+ SY L+ +
Sbjct: 481 VQM-VDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539
Query: 338 NGEVEETVKNLW-------------EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ +V ++W ++ E+Q P+ Y + +CR R EA
Sbjct: 540 KSSSDNSV-DIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFM 598
Query: 385 ELQNKNLIDGY-TYTKLLDVLED 406
+QN NL YT ++D D
Sbjct: 599 GMQNANLTPSEDVYTSIIDCCAD 621
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 10/194 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ ++++L A R K +E + +V G++ + S+I G +
Sbjct: 315 PNDWTFSVLIDALCKREK--------VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ A + +M + ++P++ SY LI GLC Q + A + ++M KG S +Y
Sbjct: 367 KIDAADELMQKM-ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTY 425
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
++ L E K +MI D +TY + C GR +A ++ ++ +
Sbjct: 426 TIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVD 485
Query: 389 KNLIDG-YTYTKLL 401
+ + TY L+
Sbjct: 486 RGVFPNLVTYNTLI 499
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+R+Y L A+ G + + +++ G+ PD ++ S + GY + +
Sbjct: 72 LRTYTTLINAYCLAGD--------IPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGML 123
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
A R+F M + L +F+Y L+HGL G + A + M+ P + Y +
Sbjct: 124 THACRVFVLMPL-RGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYAT 182
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NK 389
+V L G EE L E + + + Y ++D C G A+K+ + + N+
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242
Query: 390 NLIDGYTYTKLL 401
+ TYT+L+
Sbjct: 243 CSPNVRTYTELI 254
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/219 (18%), Positives = 88/219 (40%), Gaps = 12/219 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y ++I + K+ A + + M + + P SY+ L + K
Sbjct: 352 EVVYTSLIDGLCKTGKIDAADELMQKMISEGFV---PDAHSYSSLIDGLCRQKK------ 402
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ + + M+ GI+ + +I + +IF +M + P+ +
Sbjct: 403 --LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM-IATGINPDIVT 459
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y + C +GR ++A + +M +G P+ +YN+L+ A G V + M+
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
K + +Y +L + ++ + ++ + K K+L
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDL 558
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 115/222 (51%), Gaps = 21/222 (9%)
Query: 188 KLSRAVYVFKYMKNSRNLE-CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
KL AV +F N LE P + ++ IL F G+ ++ + + M+
Sbjct: 157 KLKDAVDLF----NKMILENINPDVYTFTILVDGFCKEGR--------VKEAKNVLAMMM 204
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFH---QMGVVYNYLPNSFSYDYLIHGLCAQ 303
GI+P + + NS++ GY L VN A IF+ Q+GV P+ SY LI+G C
Sbjct: 205 IQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVS----PDIQSYSILINGFCKI 260
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
A EL EM K +P+ +Y+SL+ L +G++ +K + EM ++ +P + +TY
Sbjct: 261 KMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTY 320
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
++LD +C+ + A+ LL +++N+ + + YTYT L+ L
Sbjct: 321 SSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGL 362
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 120/240 (50%), Gaps = 23/240 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N I+ +++ +Y+ + M+ R + +P++ + NIL +F G ++
Sbjct: 65 FNKILGSLVKSKHYHTVLYLSQKME-FRGI--KPNLVNCNILINSFCQLG--------HI 113
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN----------DALRIFHQMGVVYN 285
+ + +++ G +P+ +LN++IKG L+ ++ DA+ +F++M ++ N
Sbjct: 114 PSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKM-ILEN 172
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+ +++ L+ G C +GR K A+ + M +G P +YNSL+ L +V +
Sbjct: 173 INPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAK 232
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
M + D +Y +++ C+ EAM+LLKE+ +K +I TY+ L+D L
Sbjct: 233 SIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGL 292
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 118/257 (45%), Gaps = 13/257 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D T+ I+ +E +V+ M+ G YN+++ + +++++A +
Sbjct: 176 DVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGV-VTYNSLMDGYFLVKQVNKAKSI 234
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M L P I+SY+IL F M+ L K+M + I P++
Sbjct: 235 FNTM---AQLGVSPDIQSYSILINGFCKIK--------MMDEAMELLKEMHHKQIIPNVV 283
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +S+I G S ++ AL++ +M PN +Y ++ LC + NA L +
Sbjct: 284 TYSSLIDGLCKSGKISYALKLVDEMHD-RGQPPNIVTYSSILDALCKNHQVDNAIALLTQ 342
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
MK +G P+ +Y L+ L +G++E+ K +++ K ++ TY ++ C +G
Sbjct: 343 MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGL 402
Query: 376 AGEAMKLLKELQNKNLI 392
EA+ LL ++++ I
Sbjct: 403 FDEALTLLSKMEDNGCI 419
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 105/222 (47%), Gaps = 19/222 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I F + + + A+ + K M + + + P++ +Y+ L GK +Y
Sbjct: 250 YSILINGFCKIKMMDEAMELLKEMHHKQII---PNVVTYSSLIDGLCKSGKISYALK--- 303
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
L +M + G P+I + +S++ ++ V++A+ + QM G+ PN ++
Sbjct: 304 -----LVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQ----PNMYT 354
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC G+ ++AR++ +++ KG + +Y ++ G +E + L +M
Sbjct: 355 YTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKME 414
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
+ + TY ++ + ++ A KLL E+ N DG
Sbjct: 415 DNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNF-DG 455
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF +++ P N ++ + S H + L + +M PN + + LI+
Sbjct: 49 LFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEF-RGIKPNLVNCNILINSF 107
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV----------EETVKNLWE 350
C G +A + ++ + G+ P++ + N+L+ L LNG++ ++ V +
Sbjct: 108 CQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNK 167
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
MI + D T+ ++D C+ GR EA +L + + + G TY L+D
Sbjct: 168 MILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMD 220
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+IY F KL A+ + M P++ +YNIL A GK +
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLK---TINPNVYTYNILVDALCKEGK--------V 285
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + M+ ++PD+ + ++++ GY L V A +F+ M ++ P+ +Y
Sbjct: 286 KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM-GVTPDVHTYTI 344
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C A L EM +K VP +Y+SL+ L +G + + EM ++
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRG 404
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+P D ITY +++D +C+ G A+ L +++++ + + +T+T LLD L
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGL 454
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 120/261 (45%), Gaps = 29/261 (11%)
Query: 154 QEMDDVVNQ------MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
Q +DD V+Q M TP +N I+ FA+ + S AV + S LE
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQ----FNKILDSFAKMKHYSTAVSL------SHRLEL 87
Query: 208 R---PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+ P + + NIL F G+ T+ V +++ G PD +LN++IKG
Sbjct: 88 KGIQPDLITLNILINCFCHMGQITFGFSV--------LAKILKRGYPPDTVTLNTLIKGL 139
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
L V AL FH + + N SY LI+G+C G T+ A +L ++ + P+
Sbjct: 140 CLKGQVKKALH-FHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPN 198
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ Y++++ AL V E EM K D +TY T++ C G+ EA+ LL
Sbjct: 199 VEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLN 258
Query: 385 ELQNKNL-IDGYTYTKLLDVL 404
E+ K + + YTY L+D L
Sbjct: 259 EMVLKTINPNVYTYNILVDAL 279
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 110/217 (50%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I F + + + A+ +FK M + +N+ P I +Y+ L G+ Y+
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEM-HQKNM--VPGIVTYSSLIDGLCKSGRIPYVWD--- 395
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M + G D+ + +S+I G + H++ A+ +F++M PN F++
Sbjct: 396 -----LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD-QEIRPNIFTFTI 449
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC GR K+A+E+ ++ KG+ + +YN +++ G +EE + L +M +
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ T+ T++ + ++ +A KLL+++ + L+
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 37/190 (19%)
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+P++ +++I V++A +F +M V + +Y LI+G C +G+ K A
Sbjct: 196 KPNVEMYSTIIDALCKYQLVSEAYGLFSEM-TVKGISADVVTYSTLIYGFCIEGKLKEAI 254
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD-- 368
L +EM K P+ +YN LV AL G+V+E L M++ D ITY T++D
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314
Query: 369 ---------------------------------EICRRGRAGEAMKLLKELQNKNLIDG- 394
C+ EA+ L KE+ KN++ G
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374
Query: 395 YTYTKLLDVL 404
TY+ L+D L
Sbjct: 375 VTYSSLIDGL 384
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 31/245 (12%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YNTII + R +S A+ +F +K RP + +Y+IL + + + +
Sbjct: 225 VIYNTIIDGLCKDRLVSEALDIFSEIKGK---GVRPDVFTYSILMHGLCNSDQKEEASAL 281
Query: 234 YMETI---------------------------RCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
+ E + + + K M+ G+EP+ + NS++ GY L
Sbjct: 282 FNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCL 341
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
N V +A +F M + +PN SY+ LI+G C R AREL DEM +G +P++
Sbjct: 342 QNKVFEARMVFDAM-ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTF 400
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN+L+S L G E + +M + D +T +LD +C+ G A++L + +
Sbjct: 401 NYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460
Query: 387 QNKNL 391
Q+ L
Sbjct: 461 QDSCL 465
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 126/273 (46%), Gaps = 14/273 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F DA T+ + L + + ++M+A+ + YNTII F + K + A
Sbjct: 150 FEPDAVTFSSLINGLCFEDKFARAMEFFDEMVAS-GYQPNLHTYNTIIKGFCKIGKTTVA 208
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V + K M + RP I YN + + + E + +F ++ G+ P
Sbjct: 209 VGLLKKMDKAGG---RPDIVIYNTIIDGLCK-------DRLVSEALD-IFSEIKGKGVRP 257
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+F+ + ++ G S+ +A +F++M + N +P+ +++ L+ LC +G A+ +
Sbjct: 258 DVFTYSILMHGLCNSDQKEEASALFNEM-MSLNIMPDVVTFNILVDKLCKEGMLSEAQGI 316
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
M KG P+ +YNSL++ L +V E MI K + ++Y +++ C+
Sbjct: 317 IKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCK 376
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
R EA +L E+ + LI + + Y L+ L
Sbjct: 377 AQRIDEARELFDEMSFRGLIPNTFNYNTLISGL 409
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 124/265 (46%), Gaps = 16/265 (6%)
Query: 113 LQEDPLV--CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFC 170
L +D LV L++F+ K R D TY I+ L + +E + N+M++ +
Sbjct: 234 LCKDRLVSEALDIFSEI-KGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSL-NIM 291
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
+N ++ + LS A + K M + +E P+ +YN L + +
Sbjct: 292 PDVVTFNILVDKLCKEGMLSEAQGIIKIMIE-KGVE--PNYATYNSLMNGYCLQ------ 342
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
N V+ R +F M+ G P++ S N +I GY + +++A +F +M +PN+
Sbjct: 343 NKVF--EARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSF-RGLIPNT 399
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
F+Y+ LI GLC GR AREL +M+ +G P + L+ +L G ++ ++
Sbjct: 400 FNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRA 459
Query: 351 MIEKQRPVDFITYRTVLDEICRRGR 375
M + + +TY ++ + + G+
Sbjct: 460 MQDSCLKPNLVTYDILIRAMYKSGK 484
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A++ F +M + L P I ++ L +A + I H T+ L K++ IE
Sbjct: 68 ALFSFNHMIHKHPL---PCIVEFDKLLSALVR------IKHY--GTVLSLSKRIELLRIE 116
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
D+F N +I + V+ A + ++ + + P++ ++ LI+GLC + + A E
Sbjct: 117 RDVFHFNILINCFSRLQRVDFAFSVLGKI-IKLGFEPDAVTFSSLINGLCFEDKFARAME 175
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
DEM G+ P+ +YN+++ G+ V L +M + D + Y T++D +C
Sbjct: 176 FFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC 235
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ EA+ + E++ K + D +TY+ L+
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILM 266
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 138/296 (46%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ + L+ F W + F HD T+ + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHAAKTSEHALQFFRWVERSNLFEHDRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + +A + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEE---LGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF + RG+ +M R F +M+++GIEP + N MI G+ LS ++ A
Sbjct: 118 YDALFKVIMRRGR-------FMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
+R F M P+ +Y+ +I+G + A + EMK K P+ +Y +L+
Sbjct: 170 MRFFEDMKS-REISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+V + ++ + EM + ITY T+L +C G+ EA +LKE+ +K
Sbjct: 229 GYVSVDQVHDALRLVEEMKGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDK 284
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 23/240 (9%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
PSF E +YN + A+ A+ F++++ S E R ++ L G
Sbjct: 7 VPSF-DHELVYNVL----HAAKTSEHALQFFRWVERSNLFEHD---RETHLKIIEIL--G 56
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
+ + +NH RC+ M G+E D MI Y + V +++++F +M GV
Sbjct: 57 RASKLNHA-----RCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGV 111
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
SYD L + +GR A+ ++M +G P+ ++N ++ L+G+++
Sbjct: 112 ERTIK----SYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMD 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
++ +M ++ D +TY T+++ R + EA K E++ KN+ TYT L+
Sbjct: 168 TAMRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLI 227
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 116/229 (50%), Gaps = 17/229 (7%)
Query: 160 VNQMLAT-PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
VN+ L P+ C ++N ++ ++ L A+ V MK SR P++ +Y+ L
Sbjct: 189 VNEHLKVRPNTC----IFNILVKHHCKSGDLESALEVMHEMKKSRR--SYPNVITYSTLI 242
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVN-DGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G+ E I LF++MV+ D I PD + + +IKG+ + A +I
Sbjct: 243 DGLCGNGR-------LKEAIE-LFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIM 294
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
M PN F+Y L++G C +GR + A+E+ DEMK G P + Y +L++
Sbjct: 295 EFMRS-NGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCG 353
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
G ++E ++ L EM E + D +T+ +L +CR GR EA+++L+ L
Sbjct: 354 VGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENL 402
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 146/328 (44%), Gaps = 20/328 (6%)
Query: 78 SKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDA 137
S ++ L +T +C ++E N++ ++DP LE+FN +Q F H+
Sbjct: 39 SPTETSSTLVETGRKCKF------ISHESAINLIKREKDPQHALEIFNMVGEQKGFNHNH 92
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-TEALYNTIIYFFAEARKLSRAVYVF 196
+TY + KL K + +D +++QM T C E ++ ++ F ++ R + +F
Sbjct: 93 ATYSTLIHKLAQTKKFHAVDALLHQM--TYETCKFHENIFLNLMKHFYKSSLHERVLEMF 150
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
++ + +PS+++ + + + +CL + + P+
Sbjct: 151 YAIQPI--VREKPSLKAISTCLNILVESKQIDLAQ-------KCLLYVNEHLKVRPNTCI 201
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N ++K + S + AL + H+M PN +Y LI GLC GR K A EL +EM
Sbjct: 202 FNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEM 261
Query: 317 KRKG-FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
K +P + +Y+ L+ G+ + K + M + Y +++ C+ GR
Sbjct: 262 VSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGR 321
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLD 402
EA ++ E+++ L D YT L++
Sbjct: 322 LEEAKEVFDEMKSSGLKPDTVGYTTLIN 349
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 118/263 (44%), Gaps = 12/263 (4%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LE+ + K R + TY + L +E ++ +M++ Y+ +I
Sbjct: 219 LEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLI 278
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
F K RA + ++M+++ C P++ +Y++L F G+ +E +
Sbjct: 279 KGFCHGGKADRARKIMEFMRSNG---CDPNVFNYSVLMNGFCKEGR--------LEEAKE 327
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F +M + G++PD ++I + +++A+ + +M + ++ +++ L+ GL
Sbjct: 328 VFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEM-KCKADAVTFNVLLKGL 386
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +GR A + + + +G + SY +++ L GE+E++ L M+ + +
Sbjct: 387 CREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHY 446
Query: 361 ITYRTVLDEICRRGRAGEAMKLL 383
T +L +C G A+ L
Sbjct: 447 ATSNELLVCLCEAGMVDNAVTAL 469
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 141/305 (46%), Gaps = 55/305 (18%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRAV 193
AST++ + L +E ++ N+M+ P+ YNTII + S AV
Sbjct: 158 ASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVIS----YNTIINGLCKTGNTSMAV 213
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
VFK M+ + C+P + +YN + + K+ +N ME +M++ GI P+
Sbjct: 214 DVFKKMEQNG---CKPDVVTYNTIIDSLC---KDRLVNDA-ME----FLSEMLDRGIPPN 262
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+F+ N M+ G+ + +N+A R+F +M V + +P++ + L+ GLC +G AR +
Sbjct: 263 VFTYNCMVHGFCILGQLNEATRLFKEM-VGRDVMPDTVTLTILVDGLCKEGMVSEARLVF 321
Query: 314 DEMKRKGFVPSSKSYNSLVSA------------------------------LALNG---- 339
+ M KG P+ +YN+L+ + +NG
Sbjct: 322 ETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKS 381
Query: 340 -EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTY 397
++E L EM K D +TY T++ +C+ GR EA+ + KE+ + L+ TY
Sbjct: 382 RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTY 441
Query: 398 TKLLD 402
+ LLD
Sbjct: 442 SILLD 446
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 119/260 (45%), Gaps = 17/260 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTEALYNTIIYFFAEARKLSR 191
+ D TY+ + L ++ + + +++ML P T YN +++ F +L+
Sbjct: 225 KPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFT---YNCMVHGFCILGQLNE 281
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A +FK M + P + IL G + R +F+ M G+E
Sbjct: 282 ATRLFKEMVGR---DVMPDTVTLTILVDGLCKEG--------MVSEARLVFETMTEKGVE 330
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P+I + N+++ GY L +N+A ++F M + P SY+ LI+G C R A+
Sbjct: 331 PNISTYNALMDGYCLQRLMNEAKKVFEIM-IRQGCAPGVHSYNILINGFCKSRRMDEAKS 389
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L EM K P + +Y++L+ L G +E + EM + +TY +LD C
Sbjct: 390 LLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFC 449
Query: 372 RRGRAGEAMKLLKELQNKNL 391
+ G EA+KLLK +Q K L
Sbjct: 450 KHGHLDEALKLLKSMQEKKL 469
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
RPS+ + +F + + + T+ L QM G+ +++SLN +I
Sbjct: 85 RPSVAEFGKFLGSFAKKKQYS--------TVVSLCNQMDLFGVTHNVYSLNVLINCLCRL 136
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
NHV+ A+ I +M P + +++ LI+GLC +G+ K A EL +EM R+G P+ S
Sbjct: 137 NHVDFAVSILGKM-FKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVIS 195
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN++++ L G V +M + D +TY T++D +C+ +AM+ L E+
Sbjct: 196 YNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEML 255
Query: 388 NKNL 391
++ +
Sbjct: 256 DRGI 259
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+NHV + +M GI P + N++I G + +A+ +F++M V + PN
Sbjct: 136 LNHVDFAV--SILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEM-VRRGHEPN 192
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
SY+ +I+GLC G T A ++ +M++ G P +YN+++ +L + V + ++ L
Sbjct: 193 VISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLS 252
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
EM+++ P + TY ++ C G+ EA +L KE+ ++++ D T T L+D L
Sbjct: 253 EMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 19/220 (8%)
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
L P+ ++N L + GK E + LF +MV G EP++ S N++I G
Sbjct: 152 LGIHPTASTFNALINGLCNEGK-------IKEAVE-LFNEMVRRGHEPNVISYNTIINGL 203
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ + + A+ +F +M P+ +Y+ +I LC +A E EM +G P+
Sbjct: 204 CKTGNTSMAVDVFKKMEQ-NGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPN 262
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+YN +V + G++ E + EM+ + D +T ++D +C+ G EA + +
Sbjct: 263 VFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFE 322
Query: 385 ELQNKN----------LIDGYTYTKLLDVLEDDFGNSIRH 414
+ K L+DGY +L++ + F IR
Sbjct: 323 TMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQ 362
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 92/193 (47%), Gaps = 12/193 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T++ + + A+ +FK M + L P++ +Y+IL F G ++
Sbjct: 406 YSTLMQGLCQFGRPKEALNIFKEMCSYGLL---PNLVTYSILLDGFCKHG--------HL 454
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L K M +EP+I +I+G ++ + A +F ++ P +Y
Sbjct: 455 DEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKL-FADGIRPTIRTYTV 513
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GL +G + A +L +M+ GF+P+S SYN ++ N + ++ + EM+ K+
Sbjct: 514 MIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 573
Query: 356 RPVDFITYRTVLD 368
+ T++ +LD
Sbjct: 574 FSANLSTFQMLLD 586
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 148/352 (42%), Gaps = 62/352 (17%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q D L LFN ASK+P F + + Y + +LG + + +M ++ M + GT
Sbjct: 60 QADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTS 119
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE--------------------------- 206
+ +I +A+ + V +M + L+
Sbjct: 120 P-FLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHA 178
Query: 207 ------CRPSIRSYNILFTAF---------------------------LSRGKNTYINHV 233
+P + ++N+L A + YI
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG 238
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
++ + +QMV G S+N ++ G+ V DAL +M + P+ +++
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L++GLC G K+A E+ D M ++G+ P +YNS++S L GEV+E V+ L +MI
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMIT 358
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ + +TY T++ +C+ + EA +L + L +K ++ D T+ L+ L
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 16/225 (7%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
P C +N++I R A+ +F+ M R+ C P +YN+L + S+GK
Sbjct: 398 PDVC----TFNSLIQGLCLTRNHRVAMELFEEM---RSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
++ + KQM G + + N++I G+ +N + +A IF +M V +
Sbjct: 451 --------LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEV-HGV 501
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
NS +Y+ LI GLC R ++A +L D+M +G P +YNSL++ G++++
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAAD 561
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ M D +TY T++ +C+ GR A KLL+ +Q K +
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 21/229 (9%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N I++ F + ++ A+ + M N P ++N L G ++ H
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGF--FPDQYTFNTLVNGLCKAG---HVKHAIE- 316
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ M+ +G +PD+++ NS+I G V +A+ QM + + PN+ +Y+ L
Sbjct: 317 ----IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQM-ITRDCSPNTVTYNTL 371
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I LC + + + A EL + KG +P ++NSL+ L L ++ EM K
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQ----------NKNLIDGY 395
D TY ++D +C +G+ EA+ +LK+++ LIDG+
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 125/289 (43%), Gaps = 24/289 (8%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YN 177
V +ELF + D TY+++ L + E +++ QM S C + YN
Sbjct: 418 VAMELFE-EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM--ELSGCARSVITYN 474
Query: 178 TIIYFFAEARKLSRAVYVFKYMKN---SRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
T+I F +A K+ A +F M+ SRN S+ +YN L +
Sbjct: 475 TLIDGFCKANKIREAEEIFDEMEVHGVSRN-----SV-TYNTLIDGLCKSRR-------- 520
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E L QM+ +G +PD F+ NS++ + + A I M P+ +Y
Sbjct: 521 VEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAM-TSNGCEPDIVTYG 579
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GLC GR + A +L ++ KG + +YN ++ L + E + EM+E+
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Query: 355 QRPV-DFITYRTVLDEICRRGRA-GEAMKLLKELQNKNLIDGYTYTKLL 401
D ++YR V +C G EA+ L EL K + ++ +L
Sbjct: 640 NEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 14/221 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
++ TY+ + L ++ ++ +++QM+ + YN+++ F + +A +
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK-PDKFTYNSLLTHFCRGGDIKKAADI 562
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M ++ C P I +Y L + G+ +E L + + GI
Sbjct: 563 VQAMTSNG---CEPDIVTYGTLISGLCKAGR--------VEVASKLLRSIQMKGIALTPH 611
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC-AQGRTKNARELCD 314
+ N +I+G +A+ +F +M P++ SY + GLC G + A +
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
E+ KGFVP S L L L +EET+ L M+ ++
Sbjct: 672 ELLEKGFVPEFSSLYMLAEGL-LTLSMEETLVKLVNMVMQK 711
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 119/238 (50%), Gaps = 13/238 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YN +I + A ++ A+ VF+ M +R C P++R+Y L GK
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNR---CSPNVRTYTELIHGLCKSGK------- 262
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+E LF +MV G+EP++ + ++I+G H+ A R+ H M +PN +++
Sbjct: 263 -VERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET-NGLVPNDWTF 320
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI LC + + + A+ + +KG + Y SL+ L G+++ + + +MI
Sbjct: 321 SVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMIS 380
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDFGN 410
+ D +Y +++D +CR+ + +A +L+++ K + TYT ++D L + G+
Sbjct: 381 EGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 16/270 (5%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA-RKLSRAVYV 195
A TY + L A M +E V M A T +Y T+++ EA R V +
Sbjct: 142 AFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTH-VYATMVHGLCEAGRTEEAEVLL 200
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M N P+I YN L + + G+ ME +F+ M + P++
Sbjct: 201 EEAMSNGF----EPNIVVYNALIDGYCNAGE--------MEHALKVFEGMDGNRCSPNVR 248
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +I G S V A+ +F +M V PN +Y LI G C +G + A L
Sbjct: 249 TYTELIHGLCKSGKVERAMVLFSRM-VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHL 307
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+ G VP+ +++ L+ AL +VEE L +++K V+ + Y +++D +C+ G+
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
A +L++++ ++ + D ++Y+ L+D L
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGL 397
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 27/259 (10%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
D + Q + + F Y+++I +KLS+A + + M + ++ P +Y I+
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME-KGIQASPV--TYTII 428
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+ + V E + +F +M+ GI PDI + ++ Y + DA +
Sbjct: 429 I--------DELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMI 480
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
QM V PN +Y+ LI G G A + M KG+ P+ SY L+ +
Sbjct: 481 VQM-VDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539
Query: 338 NGEVEETVKNLW-------------EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ +V ++W ++ E+Q P+ Y + +CR R EA
Sbjct: 540 KSSSDNSV-DIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFM 598
Query: 385 ELQNKNLIDGY-TYTKLLD 402
+QN NL YT ++D
Sbjct: 599 GMQNANLTPSEDVYTSIID 617
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 10/194 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ ++++L A R K +E + +V G++ + S+I G +
Sbjct: 315 PNDWTFSVLIDALCKREK--------VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ A + +M + ++P++ SY LI GLC Q + A + ++M KG S +Y
Sbjct: 367 KIDAADELMQKM-ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTY 425
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
++ L E K +MI D +TY + C GR +A ++ ++ +
Sbjct: 426 TIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVD 485
Query: 389 KNLIDG-YTYTKLL 401
+ + TY L+
Sbjct: 486 RGVFPNLVTYNTLI 499
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+R+Y L A+ G + + +++ G+ PD ++ S + GY + +
Sbjct: 72 LRTYTTLINAYCLAGD--------IPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGML 123
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
A R+F M + L +F+Y L+HGL G + A + M+ P + Y +
Sbjct: 124 THACRVFVLMPL-RGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NK 389
+V L G EE L E + + + Y ++D C G A+K+ + + N+
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242
Query: 390 NLIDGYTYTKLL 401
+ TYT+L+
Sbjct: 243 CSPNVRTYTELI 254
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 107/258 (41%), Gaps = 13/258 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + R ++ + ++ QM+ F YNT+I +A +S+A
Sbjct: 456 DIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNL-VTYNTLIRGYANLGLVSQAFST 514
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY----METIRCLFKQMVND--G 249
F+ M +P+ SY +L + + + ++ M+ ++ L + +
Sbjct: 515 FEVMVGKG---WKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLP 571
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ DI+S I+ + + +A F M N P+ Y +I C +A
Sbjct: 572 LAADIYS--CFIRCLCRVDRLEEAKHFFMGMQNA-NLTPSEDVYTSIIDCCCRLKILTDA 628
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
L D M + G++P +SY ++S+L G + +++ K+ D I ++ ++
Sbjct: 629 LTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYG 688
Query: 370 ICRRGRAGEAMKLLKELQ 387
+ ++G E LL ++
Sbjct: 689 LLQKGSVAEFSSLLSVMK 706
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/219 (18%), Positives = 88/219 (40%), Gaps = 12/219 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y ++I + K+ A + + M + + P SY+ L + K
Sbjct: 352 EVVYTSLIDGLCKTGKIDAADELMQKMISEGFV---PDAHSYSSLIDGLCRQKK------ 402
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ + + M+ GI+ + +I + +IF +M + P+ +
Sbjct: 403 --LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM-IATGINPDIVT 459
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y + C +GR ++A + +M +G P+ +YN+L+ A G V + M+
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
K + +Y +L + ++ + ++ + K K+L
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDL 558
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 23/268 (8%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+ EM D TP YN ++ + ++ A+ +++KN + C
Sbjct: 11 AMKLLDEMRD----KGCTPDI----VTYNVVVNGICQEGRVDDAI---EFLKNLPSYGCE 59
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ SYNI+ + + E L +M G P++ + N +I
Sbjct: 60 PNTVSYNIVLKGLCTAER--------WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKG 111
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V AL + Q+ Y PNS SY+ L+H C Q + A D M +G P SY
Sbjct: 112 LVEPALEVLEQI-PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 170
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L++AL +GEV+ V+ L ++ +K I+Y TV+D + + G+ EA++LL E+ +
Sbjct: 171 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 230
Query: 389 KNL-IDGYTYTKLLDVL--EDDFGNSIR 413
K L D TY+ + L ED ++IR
Sbjct: 231 KGLQPDIITYSTIAAGLCREDRIEDAIR 258
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 18/265 (6%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQE--MDDVVNQMLATPSFCGTE---ALYNTIIYFFAEA 186
R T I+T + + QE +DD + + PS+ G E YN ++ A
Sbjct: 17 EMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY-GCEPNTVSYNIVLKGLCTA 75
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
+ A + M C P++ ++N+L + +G +E + +Q+
Sbjct: 76 ERWEDAEELMGEMGQKG---CPPNVVTFNMLISFLCRKG--------LVEPALEVLEQIP 124
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
G P+ S N ++ + ++ A+ M V P+ SY+ L+ LC G
Sbjct: 125 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM-VSRGCYPDIVSYNTLLTALCRSGEV 183
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
A EL ++K KG P SYN+++ L G+ +E ++ L EM+ K D ITY T+
Sbjct: 184 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 243
Query: 367 LDEICRRGRAGEAMKLLKELQNKNL 391
+CR R +A++ ++Q+ +
Sbjct: 244 AAGLCREDRIEDAIRAFGKVQDMGI 268
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 16/268 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
+Y+I+ + L A+ +++ ++++ +M C + +N +I F + A+ V +
Sbjct: 64 SYNIVLKGLCTAERWEDAEELMGEM--GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 121
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
+ C P+ SYN L AF + K M+ MV+ G PDI S
Sbjct: 122 QIPK---YGCTPNSLSYNPLLHAFCKQKK--------MDKAMAFLDLMVSRGCYPDIVSY 170
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+++ S V+ A+ + HQ+ P SY+ +I GL G+TK A EL +EM
Sbjct: 171 NTLLTALCRSGEVDVAVELLHQLKD-KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 229
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG P +Y+++ + L +E+ ++ ++ + + + Y ++ +C+R
Sbjct: 230 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 289
Query: 378 EAMKLLK-ELQNKNLIDGYTYTKLLDVL 404
A+ L + N + + TYT L++ L
Sbjct: 290 SAIDLFAYMIGNGCMPNESTYTILIEGL 317
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +++ F + +K+ +A+ M SR C P I SYN L TA G+ V +
Sbjct: 135 YNPLLHAFCKQKKMDKAMAFLDLMV-SRG--CYPDIVSYNTLLTALCRSGEV----DVAV 187
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L Q+ + G P + S N++I G + +AL + ++M V P+ +Y
Sbjct: 188 E----LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM-VSKGLQPDIITYST 242
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+ GLC + R ++A +++ G P++ YN+++ L E + MI
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ TY +++ + G EA LL EL ++ ++
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 130/271 (47%), Gaps = 20/271 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY+I+ L A + +++++M+ TP +N+I+ +A K RA
Sbjct: 9 DVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPD----TVTFNSIMDGLCKAGKFERA 64
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ M RN CRPS +YN L + L + +N ++ + L + V+ G P
Sbjct: 65 HSLLAVMAE-RN--CRPSCCTYNTLISG-LCKQQN-------VDRAKTLVDEFVSSGFVP 113
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + + + G +++A + +M PN +Y+ LI GLC +T+ A EL
Sbjct: 114 DVVTYSILADGLCKRGRIDEAFELVKEMSG-NGCTPNLVTYNTLIDGLCKASKTEKAYEL 172
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+ + GFVP +Y +V L G +++ +K + M+++ ITY +++ +CR
Sbjct: 173 LETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCR 232
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
GR EA + KE+ +K+ D Y L++
Sbjct: 233 TGRVDEAHHIFKEMVSKDCTADALAYVSLVN 263
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 112/236 (47%), Gaps = 18/236 (7%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
PS C YNT+I + + + RA + +S + P + +Y+IL RG+
Sbjct: 78 PSCC----TYNTLISGLCKQQNVDRAKTLVDEFVSSGFV---PDVVTYSILADGLCKRGR 130
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
I+ + L K+M +G P++ + N++I G ++ A + + V +
Sbjct: 131 ---IDEAFE-----LVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETL-VSSGF 181
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+P+ +Y ++ GLC +GR A ++ + M ++G PS +Y +L+ L G V+E
Sbjct: 182 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 241
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLD 402
EM+ K D + Y ++++ C+ R EA K++ ++ ID Y L+D
Sbjct: 242 IFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYID--VYNALMD 295
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 110/268 (41%), Gaps = 29/268 (10%)
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+ L + F Y I+ + +L +A K ++ C PS+ +Y L
Sbjct: 174 ETLVSSGFVPDVVTYTIIVDGLCKEGRLDKA---LKMVEGMLKRGCTPSVITYTALMEGL 230
Query: 222 LSRGKNTYINHVYMETI----------------------RCLFKQMVNDGIE--PDIFSL 257
G+ +H++ E + R Q V DGI P I
Sbjct: 231 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVY 290
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+++ GY +++ +F M +PN +Y+ ++ GLC G+ A + M
Sbjct: 291 NALMDGYCKEGRLDEIPNVFEDMAC-RGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
G VP SYN ++ L + +E + L +MI+ P D +TY T++ + C+ R
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 409
Query: 378 EAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+A+ +LK + + D TY L+ L
Sbjct: 410 DAVGILKNMIKAGVDPDNVTYNTLISGL 437
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ PD+F+ N +I G ++ + A + H+M V P++ +++ ++ GLC G+ + A
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEM-VDRGVTPDTVTFNSIMDGLCKAGKFERA 64
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
L M + PS +YN+L+S L V+ + E + D +TY + D
Sbjct: 65 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124
Query: 370 ICRRGRAGEAMKLLKELQNK----NLIDGYTYTKLLDVL 404
+C+RGR EA +L+KE+ NL+ TY L+D L
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLV---TYNTLIDGL 160
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 127/305 (41%), Gaps = 45/305 (14%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTII--------- 180
F D TY I+ L + +V ML TPS AL +
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240
Query: 181 YFFAE-------ARKLSRAVYVFKYMKNSRNLECR---------PSIRSYNILFTAFLSR 224
+ F E A L+ V Y K+SR E + P I YN L +
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMG 281
G+ I +V F+ M G P+I + N ++ G V++A L H G
Sbjct: 301 GRLDEIPNV--------FEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 352
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V P+ SY+ +I GL + K AR++ D+M + G P + +YN+L++
Sbjct: 353 CV----PDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 408
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDG-YTYTK 399
++ V L MI+ D +TY T++ + + R G+A +L+ E L+N ++ TY
Sbjct: 409 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 468
Query: 400 LLDVL 404
++D L
Sbjct: 469 IIDRL 473
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 116/279 (41%), Gaps = 29/279 (10%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + L + +++++ML YNTII + L +A+ +
Sbjct: 426 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLL 485
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY--METIR------------C- 240
+M +E + +YNI G+ + + M+T+R C
Sbjct: 486 MDHM-TGHGVE--ANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCK 542
Query: 241 ---------LFKQMVN-DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
L ++MV G+ + N +I + + +++AL + M V P+
Sbjct: 543 AEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELM-VQRGCSPSV 601
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y+ +I LC + A EL DEM +G V SS SY L+ L G +E ++ L E
Sbjct: 602 ITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEE 661
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
M +D + R + + +GR EA +LL+ + K
Sbjct: 662 MASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/322 (19%), Positives = 113/322 (35%), Gaps = 99/322 (30%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ + K+ A F ++++ + C P + SYNI+ K V
Sbjct: 325 YNIVMDGLCKHGKVDEA---FPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 381
Query: 236 ETIRC---------------------------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ I+ + K M+ G++PD + N++I G +N
Sbjct: 382 QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 441
Query: 269 HVNDALRIFHQM---GVV------YNYL--------------------------PNSFSY 293
+ DA + H+M G V YN + N+ +Y
Sbjct: 442 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 501
Query: 294 DYLIHGLCAQGRTKNARELCDEMKR---------------------------------KG 320
+ I LC +GR A L EM KG
Sbjct: 502 NIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKG 561
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
+S ++N L+ A ++E + L M+++ ITY V+ +C+ + +A
Sbjct: 562 LCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAW 621
Query: 381 KLLKELQNKNLI-DGYTYTKLL 401
+L E+ + ++ +YT L+
Sbjct: 622 ELFDEMAVRGIVASSVSYTVLI 643
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M + P +YN L+ L + ++ + L EM+++ D +T+ +++D +C+ G+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 376 AGEAMKLLKELQNKN 390
A LL + +N
Sbjct: 61 FERAHSLLAVMAERN 75
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 17/314 (5%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQE--DPLVCLELFNWASK-QPRFRHDASTYHIMT 144
+ +F A+ L PRF L + +PL+C+ L+ WAS+ F D +
Sbjct: 66 NAEFAAALPRLGPRFVVRALRAAAEREGLGEPLLCVRLYVWASRFGAHFARDGG----VR 121
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
R L A + + +++A CG E + +L A Y +
Sbjct: 122 RALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPR 181
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
L RPS YN L A + G ++ Y+ F+QM DG PD F+ NS++ G
Sbjct: 182 LGLRPSTAVYNALIAASVRAGA---VDTAYLR-----FQQMPADGCRPDHFTYNSLVHGV 233
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
V++A+R+ QM PN F+Y L+ G C GR + A + D+MK KG PS
Sbjct: 234 CRRGIVDEAVRLVRQMEG-EGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPS 292
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+Y +LV + E ++ + L + + + + T+L + ++ A EA++ K
Sbjct: 293 EATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEK 352
Query: 385 ELQNKN-LIDGYTY 397
+ + L+D +
Sbjct: 353 RMSARGYLLDSTAF 366
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F +A + +A + K M++ L P++ ++N L + + G +
Sbjct: 436 YNMVIDCFVKAGAVDKAEEIVKEMQDKGFL---PNLVTFNTLISGYSKLGN--------V 484
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + K ++ G PDI + S+I G ++ ++DA F +M + PN+ +Y+
Sbjct: 485 HNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAE-WGVRPNAQTYNV 543
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+H LC+ G A +L ++MK G P + S+N+L+ + +V++ +M+
Sbjct: 544 LMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFG 603
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL 383
D TY +++ +C R +A ++L
Sbjct: 604 VVPDSYTYNSLIKALCDERRVNKAKEIL 631
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
S+ SYN++ F+ G ++ + K+M + G P++ + N++I GY +
Sbjct: 432 SVMSYNMVIDCFVKAGA--------VDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGN 483
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
V++A ++ +M + + ++P+ ++ LI GLC + +A +EM G P++++YN
Sbjct: 484 VHNA-KVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYN 542
Query: 330 SLVSALALNGEVEETVKNLWEM-IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
L+ L G V + + L +M I+ P D ++ ++ CR + +A + ++
Sbjct: 543 VLMHTLCSAGHVNKAIDLLNKMKIDGVTP-DAYSFNALILSFCRMRKVDKAEDIFNDMVR 601
Query: 389 KNLI-DGYTYTKLLDVLEDD 407
++ D YTY L+ L D+
Sbjct: 602 FGVVPDSYTYNSLIKALCDE 621
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 15/188 (7%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
VV +ML F + ++I +L A F+ M RP+ ++YN+L
Sbjct: 489 VVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAE---WGVRPNAQTYNVLM 545
Query: 219 TAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
S G N I+ L +M DG+ PD +S N++I + V+ A IF
Sbjct: 546 HTLCSAGHVNKAID---------LLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIF 596
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS-SKSYNSLVSALA 336
+ M V + +P+S++Y+ LI LC + R A+E+ +R G S ++SY +V+ALA
Sbjct: 597 NDM-VRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALA 655
Query: 337 LNGEVEET 344
G+ E
Sbjct: 656 KMGQFSEA 663
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 13/211 (6%)
Query: 200 KNSRNLECRPSIRSYNILFTAF---LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
K + E R S R Y + TAF +S E + K N G + I
Sbjct: 345 KEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMV 404
Query: 257 LNSMI--KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ S++ K + +NH + H V+ L + SY+ +I G A E+
Sbjct: 405 IKSLLNCKNFSKANHY-----LGHM--VLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVK 457
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM+ KGF+P+ ++N+L+S + G V L ++E D IT+ +++D +C
Sbjct: 458 EMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTH 517
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +A +E+ + + TY L+ L
Sbjct: 518 QLDDAFVCFEEMAEWGVRPNAQTYNVLMHTL 548
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ + KL +A +M+ L +P++ SYN + + SRG +
Sbjct: 230 FNIMVNVLCKEGKLKKAREFIGFMEG---LGFKPNVVSYNTIIHGYSSRGN--------I 278
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R + M GIEPD ++ S+I G + +A +F +M V +PN+ +Y+
Sbjct: 279 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM-VEIGLVPNAVTYNT 337
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G + A DEM +KG +PS +YN LV AL + G + E + EM +K
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
D ITY +++ R G A +A L E+ +K + + TYT L+ VL
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 447
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
STY+++ L E DD++ +M YN +I ++ +A +
Sbjct: 367 VSTYNLLVHALFMEGRMGEADDMIKEM-RKKGIIPDAITYNILINGYSRCGNAKKAFDLH 425
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M S+ +E P+ +Y L R + M+ LF+++++ G+ PD+
Sbjct: 426 NEML-SKGIE--PTHVTYTSLIYVLSRRNR--------MKEADDLFEKILDQGVSPDVIM 474
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N+M+ G+ + +V A + +M + P+ +++ L+ G C +G+ + AR L DEM
Sbjct: 475 FNAMVDGHCANGNVERAFMLLKEMDR-KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 533
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
KR+G P SYN+L+S G++++ + EM+ +TY ++ +C+
Sbjct: 534 KRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEG 593
Query: 377 GEAMKLLKELQNKNL-IDGYTYTKLLD 402
A +LLKE+ NK + D TY L++
Sbjct: 594 DLAEELLKEMVNKGISPDDSTYLSLIE 620
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 13/227 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N ++ F + ++ A ++ M L ++ ++NI+ GK ++
Sbjct: 196 NDMLSLFLKLNRMEMAWVLYAEM---FRLRISSTVYTFNIMVNVLCKEGK--------LK 244
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
R M G +P++ S N++I GY ++ A RI M V P+S++Y L
Sbjct: 245 KAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV-KGIEPDSYTYGSL 303
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I G+C +GR + A L D+M G VP++ +YN+L+ G++E EM++K
Sbjct: 304 ISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGI 363
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
TY ++ + GR GEA ++KE++ K +I D TY L++
Sbjct: 364 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 410
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTII+ ++ + A + M+ + +E P +Y L + G+ +
Sbjct: 265 YNTIIHGYSSRGNIEGARRILDAMR-VKGIE--PDSYTYGSLISGMCKEGR--------L 313
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF +MV G+ P+ + N++I GY + A +M V +P+ +Y+
Sbjct: 314 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM-VKKGIMPSVSTYNL 372
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+H L +GR A ++ EM++KG +P + +YN L++ + G ++ EM+ K
Sbjct: 373 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 432
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+TY +++ + RR R EA L +++ ++ +
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 87/212 (41%), Gaps = 22/212 (10%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY + L +E DD+ ++L +P ++N ++ + RA +
Sbjct: 439 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI----MFNAMVDGHCANGNVERAFML 494
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
K M P ++N L GK +E R L +M GI+PD
Sbjct: 495 LKEMDRK---SVPPDEVTFNTLMQGRCREGK--------VEEARMLLDEMKRRGIKPDHI 543
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N++I GY + DA R+ +M + + P +Y+ LI LC A EL E
Sbjct: 544 SYNTLISGYGRRGDIKDAFRVRDEM-LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 602
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
M KG P +Y SL+ + G V+ V++
Sbjct: 603 MVNKGISPDDSTYLSLIEGM---GNVDTLVED 631
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 134/301 (44%), Gaps = 30/301 (9%)
Query: 81 DSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTY 140
+SKP T+ ++ L P + V+ P E FNWAS+ F HD+ +Y
Sbjct: 6 NSKPW--STELESSLFSLSPSISKTTFFQVLRFIASPPKAFEFFNWASRNG-FAHDSRSY 62
Query: 141 HIMTRKLG-------AAKMYQEMDDVVNQMLATPS-FCGTEALYNTIIYFFAEARKLSRA 192
+M LG A ++ N + FC NT++ + A + A
Sbjct: 63 FMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFC------NTLLRSYGNAGLFNEA 116
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F MK+S PS+ ++N L L RG+ + V+ E G+ P
Sbjct: 117 IKLFSLMKSS---GVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTY-------GVTP 166
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D ++ N +I+G+ ++ V++ R F +M +N P+ +Y+ L+ GLC G+ + A +
Sbjct: 167 DTYTFNILIRGFCKNSMVDEGFRFFKEMS-RFNCEPDVVTYNTLVDGLCRAGKVRIAHNV 225
Query: 313 CDEM--KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
M K K P +Y +LV + E++E + EM+ + + ITY T++ +
Sbjct: 226 VKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGL 285
Query: 371 C 371
C
Sbjct: 286 C 286
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 122/255 (47%), Gaps = 19/255 (7%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
V ++M T +N +I F + + F++ K C P + +YN L
Sbjct: 154 VFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEG---FRFFKEMSRFNCEPDVVTYNTLV 210
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
GK ++V ++ + K+M + + PD+ + ++++GY + +++AL +F
Sbjct: 211 DGLCRAGKVRIAHNV----VKGMVKKMKD--LSPDVVTYTTLVRGYCMKQEIDEALVVFE 264
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE-LCDEMKRKGFVPSSKSYNSLVSALAL 337
+M V PN +Y+ LI GLC + +E L + +GFVP + +YN+L++A
Sbjct: 265 EM-VSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCD 323
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI---DG 394
G +E +K +M E + D TY ++ +C+RG A +L +L +++++ DG
Sbjct: 324 AGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDG 383
Query: 395 YT-----YTKLLDVL 404
T Y + D L
Sbjct: 384 CTPLVAAYNPIFDFL 398
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 102/248 (41%), Gaps = 20/248 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + + L + + ++ +++ + F YNT++ +A A+ +FK
Sbjct: 277 TYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKK 336
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN-------DGIE 251
MK L+ +P +Y++L RG E LF ++ + DG
Sbjct: 337 MKE---LKVQPDSATYSVLIRNLCQRGD--------FERAEQLFDKLSDEDILLRDDGCT 385
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + + N + + + A R+F Q+ P S Y LI G C +G + +
Sbjct: 386 PLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPS--YKTLIIGHCKEGTFEAGYK 443
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L M R+ +VP ++Y L++ GE K L M++ + ++L E+
Sbjct: 444 LLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELL 503
Query: 372 RRGRAGEA 379
+ A E+
Sbjct: 504 KNDFARES 511
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 116/248 (46%), Gaps = 25/248 (10%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHKFCKDGD--------I 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI---FHQMGVVYNYLPNSFS 292
+ +F + G+ P + S N+++ GYI +++ R+ H GV P+ ++
Sbjct: 153 RVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQ----PDVYT 208
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+GLC + + +A EL DEM KG VP+ ++ +L+ NG V+ ++ +M+
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFG 409
+ D ITY T++ +CR+G +A L+ E+ K L D TYT L+D E D
Sbjct: 269 SQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLE 328
Query: 410 NSIRHHLR 417
+ H R
Sbjct: 329 TAFEHRKR 336
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 105/196 (53%), Gaps = 10/196 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+ +
Sbjct: 203 QPDVYTYSVLINGLCKESK--------MDDANELFDEMLDKGLVPNGVTFTTLIDGHCKN 254
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K AR+L DEM KG P +
Sbjct: 255 GRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKIT 313
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L+ G++E ++ MI++ +D + Y ++ +C+ GR +A K+L+E+
Sbjct: 314 YTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREML 373
Query: 388 NKNL-IDGYTYTKLLD 402
+ L D TYT +++
Sbjct: 374 SVGLKPDTITYTMIIN 389
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLS-QSLSPDLITYNTLIYGLCRKGDLKQARDLIDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I+ D ++I G DA ++
Sbjct: 318 IDGXCKEGD--------LETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVL 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P++ +Y +I+ C +G +L EM+R G +PS
Sbjct: 370 REMLSV-GLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPS 415
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 31/264 (11%)
Query: 146 KLGA-AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
K+G KMY+ D ++ +M A C E +N +I F + + +S A+ VF M
Sbjct: 210 KMGKIGKMYKA-DAILKEMRAD-GICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQ-- 265
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+P++ +YN L + GK +N L QMVN ++P+I + N+++ G+
Sbjct: 266 -GVKPNVVTYNSLINGLCNNGK---VNEA-----TALRDQMVNSCLKPNIITHNALLNGF 316
Query: 265 ILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+ V A +F M G+ PN +Y+ LI C ++A L M KG
Sbjct: 317 CKNKMVKQAGELFDDMPKQGIT----PNVTTYNILIDAYCKDENMEDAFALYRIMLGKGV 372
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P +YN L++ L G++E + EM K D ITY ++D +C +G +A++
Sbjct: 373 CPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALR 432
Query: 382 LLKELQNKNL----------IDGY 395
LL E+ K L IDGY
Sbjct: 433 LLDEMCRKGLKPSQLTYNTMIDGY 456
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 16/244 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ F + + + +A +F M P++ +YNIL A Y M
Sbjct: 309 HNALLNGFCKNKMVKQAGELFDDMPKQ---GITPNVTTYNILIDA--------YCKDENM 357
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L++ M+ G+ PD+ + N +I G + A + +M + + +Y+
Sbjct: 358 EDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH-LKADLITYNI 416
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK- 354
LI LC +G K A L DEM RKG PS +YN+++ G + + NL +EK
Sbjct: 417 LIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAAL-NLRSQMEKV 475
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL--DVLEDDFGNSI 412
R + TY ++ C++ + +A LL E+ K LI +++ +++E F I
Sbjct: 476 GRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDI 535
Query: 413 RHHL 416
HL
Sbjct: 536 EGHL 539
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 15/228 (6%)
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
++ SFC + + +++ +A K R F+ K + + + S+ S N L + +
Sbjct: 84 VSGDSFCANSIIVDILVWAYA---KNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVK 140
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
G+ + VY K+M+ IEP + S N +I G +N A I M V
Sbjct: 141 VGEIGDMEFVY--------KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMK-V 191
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTK---NARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
N +Y+ LI G C G+ A + EM+ G P+ ++N L+ +
Sbjct: 192 RGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKN 251
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
V +K EM + + +TY ++++ +C G+ EA L ++ N
Sbjct: 252 VSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVN 299
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 18/232 (7%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV--VNQMLATPSFCGTEALYNTI 179
ELF+ KQ + +TY+I+ + A + M+D + +++ C + YN +
Sbjct: 327 ELFDDMPKQG-ITPNVTTYNIL---IDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCL 382
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
I L A + M ++++L + + +YNIL + ++G+ M+
Sbjct: 383 IAGLCRKGDLEAARNLVSEM-DTKHL--KADLITYNILIDSLCNKGE--------MKKAL 431
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
L +M G++P + N+MI GY ++ AL + QM V L N +Y+ LI G
Sbjct: 432 RLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKV-GRLANVATYNVLIKG 490
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
C + + ++A L +EM KG +P+ +Y + + G V + +L+++
Sbjct: 491 FCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKV 542
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 82/169 (48%), Gaps = 9/169 (5%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
FK+ + G++ + S N ++ G + + D ++ +M + P S++ +I+GLC
Sbjct: 116 FKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEM-IRRRIEPTLISFNIVINGLC 174
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G+ A ++ ++MK +G + +YN+L+ G++ + K + I K+ D I
Sbjct: 175 KVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYK--ADAILKEMRADGI 232
Query: 362 -----TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
T+ ++D C+ AMK+ E+ + + + TY L++ L
Sbjct: 233 CPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGL 281
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 136/274 (49%), Gaps = 22/274 (8%)
Query: 136 DASTYHIMT----RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D TY I+ ++ G + + +D++ N+ + P YN +I + +L
Sbjct: 250 DVITYTILIEATCKESGVGQAMKLLDEMRNKG-SKPDV----VTYNVLINGICKEGRLDE 304
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ K++ N + C+P++ ++NI+ + S G+ +M+ + L M+ G
Sbjct: 305 AI---KFLNNMPSYGCQPNVITHNIILRSMCSTGR-------WMDAEK-LLSDMLRKGCS 353
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + + N +I + A+ I +M + + PNS SY+ L+HG C + + A E
Sbjct: 354 PSVVTFNILINFLCRQGLLGRAIDILEKMPM-HGCTPNSLSYNPLLHGFCKEKKMDRAIE 412
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
D M +G P +YN+L++AL +G+V+ V+ L ++ K ITY TV+D +
Sbjct: 413 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 472
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ G+ A+KLL E++ K L D TY+ L+ L
Sbjct: 473 KVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 506
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 54/292 (18%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
T++I+ R + + + + + +++ ML +PS +N +I F L RA+ +
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV----VTFNILINFLCRQGLLGRAIDI 378
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M C P+ SYN L F K M+ MV+ G PDI
Sbjct: 379 LEKMPMH---GCTPNSLSYNPLLHGFCKEKK--------MDRAIEYLDIMVSRGCYPDIV 427
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N+++ V+ A+ I +Q+ P +Y+ +I GL G+T+ A +L DE
Sbjct: 428 TYNTLLTALCKDGKVDVAVEILNQLSS-KGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 486
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVK----------------------NLWEMIE 353
M+RKG P +Y+SLVS L+ G+V+E +K L + +
Sbjct: 487 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 546
Query: 354 KQRPVDFI-------------TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
R +DF+ TY +++ I G A EA+ LL EL ++ L+
Sbjct: 547 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G PD+ + N +I GY S +++AL++ +M N P+ +Y+ ++ LC G+ K
Sbjct: 179 GAVPDVITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQ 234
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A E+ D +K P +Y L+ A V + +K L EM K D +TY +++
Sbjct: 235 AMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN 294
Query: 369 EICRRGRAGEAMKLLKEL 386
IC+ GR EA+K L +
Sbjct: 295 GICKEGRLDEAIKFLNNM 312
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMGVVYNYLPNSFSYDYLIH 298
+ MV G PDI S+I+G+ A + I Q G V P+ +Y+ LI
Sbjct: 137 LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAV----PDVITYNVLIS 192
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G C G NA ++ D M P +YN+++ L +G++++ ++ L ++K+
Sbjct: 193 GYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 249
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
D ITY +++ C+ G+AMKLL E++NK
Sbjct: 250 DVITYTILIEATCKESGVGQAMKLLDEMRNKG 281
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 110/241 (45%), Gaps = 19/241 (7%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
++G K + +++ Q A P YN +I + ++ ++ A+ V M +
Sbjct: 161 RIGKTKKATWVMEILEQSGAVPDV----ITYNVLISGYCKSGEIDNALQVLDRMNVA--- 213
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P + +YN + GK + + L +Q+ + PD+ + +I+
Sbjct: 214 ---PDVVTYNTILRTLCDSGK-------LKQAMEVLDRQLQKE-CYPDVITYTILIEATC 262
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V A+++ +M P+ +Y+ LI+G+C +GR A + + M G P+
Sbjct: 263 KESGVGQAMKLLDEMRN-KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 321
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
++N ++ ++ G + K L +M+ K +T+ +++ +CR+G G A+ +L++
Sbjct: 322 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 381
Query: 386 L 386
+
Sbjct: 382 M 382
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ + + D + M V +P+ LI G C G+TK A + + +++ G VP
Sbjct: 125 VRNGELEDGFKFLESM-VYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL- 383
+YN L+S +GE++ ++ L M D +TY T+L +C G+ +AM++L
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 384 KELQNKNLIDGYTYTKLLDVL--EDDFGNSIR 413
++LQ + D TYT L++ E G +++
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMK 272
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 119/237 (50%), Gaps = 13/237 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN +I + A ++ A+ VF+ M +R C P++R+Y L GK
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNR---CSPNVRTYTELIHGLCKSGK-------- 262
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E LF +MV G+EP++ + ++I+G H+ A R+ H M +PN +++
Sbjct: 263 VERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET-NGLVPNDWTFS 321
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI LC + + + A+ + +KG + Y SL+ L G+++ + + +MI +
Sbjct: 322 VLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE 381
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDFGN 410
D +Y +++D +CR+ + +A +L+++ K + TYT ++D L + G+
Sbjct: 382 GFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 16/270 (5%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA-RKLSRAVYV 195
A TY + L A M +E V M A T +Y T+++ EA R V +
Sbjct: 142 AFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTH-VYATMVHGLCEAGRTEEAEVLL 200
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M N P+I YN L + + G+ ME +F+ M + P++
Sbjct: 201 EEAMSNG----FEPNIVVYNALIDGYCNAGE--------MEHALKVFEGMDGNRCSPNVR 248
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +I G S V A+ +F +M V PN +Y LI G C +G + A L
Sbjct: 249 TYTELIHGLCKSGKVERAMVLFSRM-VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHL 307
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+ G VP+ +++ L+ AL +VEE L +++K V+ + Y +++D +C+ G+
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
A +L++++ ++ + D ++Y+ L+D L
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGL 397
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 10/194 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ ++++L A R K +E + +V G++ + S+I G +
Sbjct: 315 PNDWTFSVLIDALCKREK--------VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ A + +M + ++P++ SY LI GLC Q + A + ++M KG S +Y
Sbjct: 367 KIDAADELMQKM-ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTY 425
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
++ L E K +MI D +TY + C GR +A ++ ++ +
Sbjct: 426 TIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVD 485
Query: 389 KNLIDG-YTYTKLL 401
+ + TY L+
Sbjct: 486 RGVFPNLVTYNTLI 499
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+R+Y L A+ G + + +++ G+ PD ++ S + GY + +
Sbjct: 72 LRTYTTLINAYCLAGD--------IPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGML 123
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
A R+F M + L +F+Y L+HGL G + A + M+ P + Y +
Sbjct: 124 THACRVFVLMPL-RGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NK 389
+V L G EE L E + + + Y ++D C G A+K+ + + N+
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242
Query: 390 NLIDGYTYTKLL 401
+ TYT+L+
Sbjct: 243 CSPNVRTYTELI 254
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 90/223 (40%), Gaps = 17/223 (7%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y ++I + K+ A + + M + + P SY+ L + K
Sbjct: 352 EVVYTSLIDGLCKTGKIDAADELMQKMISEGFV---PDAHSYSSLIDGLCRQKK------ 402
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ + + M+ GI+ + +I + +IF +M + P+ +
Sbjct: 403 --LSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM-IATGINPDIVT 459
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y + C +GR ++A + +M +G P+ +YN+L+ A G V + M+
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKL-----LKELQNKN 390
K + +Y +L + ++ + ++ + +K+LQ N
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESN 562
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 121/229 (52%), Gaps = 15/229 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I F A +L A+ +K M+ R P + S++ L F RG+ M
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRR---VTPDVVSFSCLIGLFTRRGE--------M 315
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ ++M G+ PD +I G+ + + +ALR+ +M V + LP+ +Y+
Sbjct: 316 DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM-VAFGCLPDVVTYNT 374
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L++GLC + R +A EL +EMK +G P ++ +L+ +G +E+ ++ ++ I Q
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQ-FFDTISDQ 433
Query: 356 R-PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
R D +TY T++D +CR+G G+A +L ++ ++ + + TY+ L+D
Sbjct: 434 RLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILID 482
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + R+LS A + MK R + P + ++ L + G +
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMK-ERGVP--PDLCTFTTLIHGYCRDGN--------I 420
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E F + + + PDI + N++I G + A ++ M PN +Y
Sbjct: 421 EKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHS-REIFPNHVTYSI 479
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI C +G+ NA DEM KG VP+ +YNS++ +G V + + L +M +
Sbjct: 480 LIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDK 539
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D ITY T++ + G+ EA LLK ++N+N+ D TY ++
Sbjct: 540 VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMII 586
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + ++N++ A G +E L MV+ GI+P + + NS++KG + +
Sbjct: 192 PDVVTHNVMVDARFRAGD--------VEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNG 243
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A +F M P+ S++ LI G C G + A EM+ + P S+
Sbjct: 244 RWDKAREVFRAMDAC-GVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSF 302
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ L+ GE++ + L EM E D + Y V+ CR G EA+++ E+
Sbjct: 303 SCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVA 362
Query: 389 KN-LIDGYTYTKLLDVL 404
L D TY LL+ L
Sbjct: 363 FGCLPDVVTYNTLLNGL 379
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
RC+F PD+ + N M+ + V A+ + M V P +Y+ ++
Sbjct: 188 RCVF---------PDVVTHNVMVDARFRAGDVEAAMALIDSM-VSKGIKPGLVTYNSVLK 237
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GL GR ARE+ M G P +S+N L+ GE+EE ++ EM ++
Sbjct: 238 GLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTP 297
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D +++ ++ RRG A + L+E++ L+ DG YT ++
Sbjct: 298 DVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVI 341
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 119/273 (43%), Gaps = 24/273 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY+ + L + + ++++N+M P C + T+I+ + + +A
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLC----TFTTLIHGYCRDGNIEKA 423
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ F + + R RP I +YN L +G N L+ M + I P
Sbjct: 424 LQFFDTISDQR---LRPDIVTYNTLIDGMCRQGDLGKANE--------LWDDMHSREIFP 472
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + + +I + V++A +M V +PN +Y+ +I G C G ++
Sbjct: 473 NHVTYSILIDSHCEKGQVDNAFAFLDEM-VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQF 531
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ--RPVDFITYRTVLDEI 370
+M+ +P +YN+L+ G++ E NL +++E + +P D +TY ++
Sbjct: 532 LPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAF-NLLKIMENENVQP-DAVTYNMIISGF 589
Query: 371 CRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
G EA + K++ + + D YTY +++
Sbjct: 590 SVHGNMQEADWVYKKMGARGIEPDRYTYMSMIN 622
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+II + + +S+ M++ + + P + +YN L ++ GK M
Sbjct: 512 YNSIIKGYCRSGNVSKGQQFLPKMRHDKVM---PDLITYNTLIHGYVKEGK--------M 560
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L K M N+ ++PD + N +I G+ + ++ +A ++ +MG P+ ++Y
Sbjct: 561 HEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGA-RGIEPDRYTYMS 619
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+I+G G +K + +L DEM +KG P K
Sbjct: 620 MINGHVVAGNSKKSFQLHDEMLQKGLAPDDK 650
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
EPD+ S N+M+ GY ++ +++A R+ M + P++++Y+ LI GLC +GRT NA
Sbjct: 117 EPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME----PDTYTYNTLIRGLCGRGRTDNAL 172
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ D+M R+G VP +Y L+ A ++ VK L EM +K D +TY V++ I
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232
Query: 371 CRRGRAGEAMKLLKELQN 388
C+ GR +AM+ LK L +
Sbjct: 233 CQEGRVDDAMEFLKSLPS 250
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 16/267 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D TY I+ Y++ ++++M C + + YN ++ + ++ A
Sbjct: 186 DVVTYTILLEATCKRSGYKQAVKLLDEM--RDKGCAPDIVTYNVVVNGICQEGRVDDA-- 241
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+++K+ + C P+ SYNI+ + + E L +M G P++
Sbjct: 242 -MEFLKSLPSYGCEPNTVSYNIVLKGLCTAER--------WEDAEKLMAEMSRKGRPPNV 292
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N +I V A+ I Q+ Y PNS SY+ ++H C Q + A +
Sbjct: 293 VTFNMLISFLCRRGLVEPAMEILDQIPK-YGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 351
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M G P SYN+L++AL GEV+ V+ L ++ +K I+Y TV+D + + G
Sbjct: 352 LMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 411
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKL 400
+ EA++LL E+ K L D TY+ +
Sbjct: 412 KTEEALELLNEMVTKGLQPDIITYSTI 438
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 18/264 (6%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQE--MDDVVNQMLATPSFCGTE---ALYNTIIYFFAEAR 187
R I+T + + QE +DD + + + PS+ G E YN ++ A
Sbjct: 213 MRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSY-GCEPNTVSYNIVLKGLCTAE 271
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+ A + M P++ ++N+L + RG +E + Q+
Sbjct: 272 RWEDAEKLMAEMSRKGR---PPNVVTFNMLISFLCRRG--------LVEPAMEILDQIPK 320
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G P+ S N ++ + ++ A+ F ++ V P+ SY+ L+ LC G
Sbjct: 321 YGCTPNSLSYNPILHAFCKQKKMDRAM-AFVELMVSSGCYPDIVSYNTLLTALCRGGEVD 379
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A EL ++K KG P SYN+++ L G+ EE ++ L EM+ K D ITY T+
Sbjct: 380 AAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTIS 439
Query: 368 DEICRRGRAGEAMKLLKELQNKNL 391
+CR GR EA+K ++Q+ +
Sbjct: 440 SGLCREGRIEEAIKAFCKVQDMGI 463
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 18/269 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
+Y+I+ + L A+ +++ + ++ +M P T +N +I F + A+ +
Sbjct: 259 SYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT---FNMLISFLCRRGLVEPAMEIL 315
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
+ C P+ SYN + AF + K M+ + MV+ G PDI S
Sbjct: 316 DQIPK---YGCTPNSLSYNPILHAFCKQKK--------MDRAMAFVELMVSSGCYPDIVS 364
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N+++ V+ A+ + HQ+ P SY+ +I GL G+T+ A EL +EM
Sbjct: 365 YNTLLTALCRGGEVDAAVELLHQLKD-KGCTPVLISYNTVIDGLTKAGKTEEALELLNEM 423
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
KG P +Y+++ S L G +EE +K ++ + + + Y +L +C+R
Sbjct: 424 VTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRAT 483
Query: 377 GEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
A+ L + N + + TYT L++ L
Sbjct: 484 HSAIDLFTYMVSNGCMPNESTYTILIEGL 512
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 107/256 (41%), Gaps = 65/256 (25%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YN I++ F + +K+ RA+ + M +S C P I SYN L TA G+
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSS---GCYPDIVSYNTLLTALCRGGEVDAAVELLH 386
Query: 227 --------------NTYINHVY----METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
NT I+ + E L +MV G++PDI + +++ G
Sbjct: 387 QLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREG 446
Query: 269 HVNDALRIF---HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ +A++ F MG+ PN+ Y+ ++ GLC + T +A +L M G +P+
Sbjct: 447 RIEEAIKAFCKVQDMGI----RPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNE 502
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y L+ LA G V+E R ++ E+C RG K
Sbjct: 503 STYTILIEGLAYEGLVKEA-------------------REMMAELCSRGVVS------KT 537
Query: 386 LQNKN---LIDGYTYT 398
L NK L+DG +T
Sbjct: 538 LVNKGAIRLLDGTMHT 553
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P + SYN + + G+ ++ R L M +EPD ++ N++I+G
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQ--------LDNARRLVAAMP---MEPDTYTYNTLIRGLCG 164
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++AL + M + +P+ +Y L+ C + K A +L DEM+ KG P
Sbjct: 165 RGRTDNALAVLDDM-LRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIV 223
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN +V+ + G V++ ++ L + + ++Y VL +C R +A KL+ E+
Sbjct: 224 TYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 283
Query: 387 QNKN 390
K
Sbjct: 284 SRKG 287
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N ++ + + +A+R+ M + + LI LCA GRT AR + +
Sbjct: 60 NDRLRVLVRRGDLEEAIRLVESMAGLEPSAAGPCAA--LIKKLCASGRTAEARRVLASCE 117
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
P SYN++V+ + G+++ + + M P D TY T++ +C RGR
Sbjct: 118 -----PDVMSYNAMVAGYCVTGQLDNARRLVAAM--PMEP-DTYTYNTLIRGLCGRGRTD 169
Query: 378 EAMKLLKELQNKNLI-DGYTYTKLLD 402
A+ +L ++ + + D TYT LL+
Sbjct: 170 NALAVLDDMLRRGCVPDVVTYTILLE 195
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 121/240 (50%), Gaps = 14/240 (5%)
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
L +PS +AL +T I + ++ + A +FK MK L RP++ + N L + +
Sbjct: 130 LTSPS----KALLDTAIGAYVQSGQPHHAFQIFKKMKR---LRLRPNLLTCNTLLNSLVR 182
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
Y + + R F + GI P++ + N +I GY L N DA+ + MG
Sbjct: 183 -----YPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGK- 236
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
YN P++ +Y+ ++ LC +GR +AR+L +MK +G +P+ +YN LV G ++E
Sbjct: 237 YNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKE 296
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ M + D TY +++ +C GR EA KL E++N L+ D +Y L++
Sbjct: 297 AANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLIN 356
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 19/230 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++Y + + L A V + M + L P + +YN+L + G+ +
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLL---PDVWTYNMLINGLCNEGR--------I 329
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
E L +M N + PD+ S N++I G + + +++A ++ +M GV PN+ +
Sbjct: 330 EEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVK----PNAVT 385
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
++ ++ C +G+ +A +M+ GF P +YN+L++ G + E + + EM
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLL 401
K +D +T T+L +CR + EA KLL + + ID +Y L+
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTI+ + +L A + MK SR L P+ +YNIL + G ++
Sbjct: 246 YNTILDTLCKKGRLGDARDLLMDMK-SRGL--LPNRNTYNILVYGYCKMG--------WL 294
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + M + + PD+++ N +I G + +A ++ +M + LP+ SY+
Sbjct: 295 KEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL-KLLPDVVSYNT 353
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G + A +L +EM KG P++ ++N +V G++++ + +M E
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +TY T+++ C+ G GEA + + E+ KN+ +D T +L L
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 14/262 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D+ T + + R L K +E +++ F E Y T+I + + + RA
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFID-EVSYGTLIVGYFKDGNVDRA 507
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ ++ MK E PS +YN + GK E +++ G+ P
Sbjct: 508 LKLWDEMKEK---EIIPSTVTYNCIIGGLCQCGKT--------EQAISKLNELLESGLLP 556
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D + N+++ GY V A + FH V ++ P+ F+ + L+ GLC +G + A +L
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQ-FHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKL 615
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+ KG + +YN+L+++L G +++ L EM EK+ D TY ++ +
Sbjct: 616 FNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTD 675
Query: 373 RGRAGEAMKLL-KELQNKNLID 393
GR EA + + K L+ NL D
Sbjct: 676 SGRIREAEEFMSKMLEKGNLPD 697
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 126/285 (44%), Gaps = 26/285 (9%)
Query: 129 KQPRFRHDASTYHIMTR---KLG-AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFA 184
++ F D TY+ + K G + ++ MD++ + + S NTI+
Sbjct: 410 EESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT-----LNTILRTLC 464
Query: 185 EARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQ 244
+KL A +K + ++R SY L + G ++ L+ +
Sbjct: 465 REKKLEEA---YKLLSSARKRGYFIDEVSYGTLIVGYFKDGN--------VDRALKLWDE 513
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M I P + N +I G A+ +++ + LP+ +Y+ ++HG C +G
Sbjct: 514 MKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL-LESGLLPDETTYNTILHGYCREG 572
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK--NLWEMIEKQRPVDFIT 362
+ A + ++M F P + N L+ L + G +E+ +K N W + K + +D +T
Sbjct: 573 DVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTW--VSKGKAIDTVT 630
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
Y T++ +C+ GR +A LL E++ K L D YTY ++ L D
Sbjct: 631 YNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTD 675
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 136/274 (49%), Gaps = 22/274 (8%)
Query: 136 DASTYHIMT----RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D TY I+ ++ G + + +D++ N+ + P YN +I + +L
Sbjct: 193 DVITYTILIEATCKESGVGQAMKLLDEMRNKG-SKPDV----VTYNVLINGICKEGRLDE 247
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ K++ N + C+P++ ++NI+ + S G+ +M+ + L M+ G
Sbjct: 248 AI---KFLNNMPSYGCQPNVITHNIILRSMCSTGR-------WMDAEK-LLSDMLRKGCS 296
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + + N +I + A+ I +M + + PNS SY+ L+HG C + + A E
Sbjct: 297 PSVVTFNILINFLCRQGLLGRAIDILEKMPM-HGCTPNSLSYNPLLHGFCKEKKMDRAIE 355
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
D M +G P +YN+L++AL +G+V+ V+ L ++ K ITY TV+D +
Sbjct: 356 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 415
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ G+ A+KLL E++ K L D TY+ L+ L
Sbjct: 416 KVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 449
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 54/292 (18%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
T++I+ R + + + + + +++ ML +PS +N +I F L RA+ +
Sbjct: 266 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSV----VTFNILINFLCRQGLLGRAIDI 321
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M C P+ SYN L F K M+ MV+ G PDI
Sbjct: 322 LEKMPMH---GCTPNSLSYNPLLHGFCKEKK--------MDRAIEYLDIMVSRGCYPDIV 370
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N+++ V+ A+ I +Q+ P +Y+ +I GL G+T+ A +L DE
Sbjct: 371 TYNTLLTALCKDGKVDVAVEILNQLSS-KGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 429
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVK----------------------NLWEMIE 353
M+RKG P +Y+SLVS L+ G+V+E +K L + +
Sbjct: 430 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 489
Query: 354 KQRPVDFI-------------TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
R +DF+ TY +++ I G A EA+ LL EL ++ L+
Sbjct: 490 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G PD+ + N +I GY S +++AL++ +M N P+ +Y+ ++ LC G+ K
Sbjct: 122 GAVPDVITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQ 177
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A E+ D +K P +Y L+ A V + +K L EM K D +TY +++
Sbjct: 178 AMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN 237
Query: 369 EICRRGRAGEAMKLLKEL 386
IC+ GR EA+K L +
Sbjct: 238 GICKEGRLDEAIKFLNNM 255
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMGVVYNYLPNSFSYDYLIH 298
+ MV G PDI S+I+G+ A + I Q G V P+ +Y+ LI
Sbjct: 80 LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAV----PDVITYNVLIS 135
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G C G NA ++ D M P +YN+++ L +G++++ ++ L ++K+
Sbjct: 136 GYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 192
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
D ITY +++ C+ G+AMKLL E++NK
Sbjct: 193 DVITYTILIEATCKESGVGQAMKLLDEMRNKG 224
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 110/241 (45%), Gaps = 19/241 (7%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
++G K + +++ Q A P YN +I + ++ ++ A+ V M +
Sbjct: 104 RIGKTKKATWVMEILEQSGAVPDV----ITYNVLISGYCKSGEIDNALQVLDRMNVA--- 156
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P + +YN + GK + + L +Q+ + PD+ + +I+
Sbjct: 157 ---PDVVTYNTILRTLCDSGK-------LKQAMEVLDRQLQKE-CYPDVITYTILIEATC 205
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V A+++ +M P+ +Y+ LI+G+C +GR A + + M G P+
Sbjct: 206 KESGVGQAMKLLDEMRN-KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 264
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
++N ++ ++ G + K L +M+ K +T+ +++ +CR+G G A+ +L++
Sbjct: 265 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 324
Query: 386 L 386
+
Sbjct: 325 M 325
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ + D + M V +P+ LI G C G+TK A + + +++ G VP
Sbjct: 70 NGELEDGFKFLESM-VYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL-KE 385
+YN L+S +GE++ ++ L M D +TY T+L +C G+ +AM++L ++
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185
Query: 386 LQNKNLIDGYTYTKLLDVL--EDDFGNSIR 413
LQ + D TYT L++ E G +++
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMK 215
>gi|125579703|gb|EAZ20849.1| hypothetical protein OsJ_36487 [Oryza sativa Japonica Group]
Length = 607
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 144/331 (43%), Gaps = 18/331 (5%)
Query: 71 SRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQE--DPLVCLELFNWAS 128
+R ++ D P L+ +F A+ L PRF L + +PL+C+ L+ WAS
Sbjct: 50 ARAASILAEDDWFPRLN-AEFAAALPRLGPRFVVRALRAAAEREGLGEPLLCVRLYVWAS 108
Query: 129 K-QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEAR 187
+ F D + R L A + + +++A CG E +
Sbjct: 109 RFGAHFARDGG----VRRALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWG 164
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L A Y + L RPS YN L A + G ++ Y+ F+QM
Sbjct: 165 RLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGA---VDTAYLR-----FQQMPA 216
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
DG PD F+ NS++ G V++A+R+ QM PN F+Y L+ G C GR +
Sbjct: 217 DGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEG-EGIRPNVFTYTMLVDGFCNAGRVE 275
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A + D+MK KG PS +Y +LV + E ++ + L + + + + T+L
Sbjct: 276 EAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTML 335
Query: 368 DEICRRGRAGEAMKLLKELQNKN-LIDGYTY 397
+ ++ A EA++ K + + L+D +
Sbjct: 336 YCLSKKDMAKEAVEFEKRMSARGYLLDSTAF 366
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 14/210 (6%)
Query: 200 KNSRNLECRPSIRSYNILFTAF---LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
K + E R S R Y + TAF +S E + K N G + I
Sbjct: 345 KEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMV 404
Query: 257 LNSMI--KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ S++ K + +NH + V+ L + SY+ +I G A E+
Sbjct: 405 IKSLLNCKNFSKANHYLGHM-------VLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVK 457
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM+ KGF+P+ ++N+L+S + G V L ++E D IT+ +++D +C
Sbjct: 458 EMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTH 517
Query: 375 RAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
+ +A +E+ + +G+ + +++L
Sbjct: 518 QLDDAFVCFEEMAEWD--EGFVPSNAIEIL 545
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 142/341 (41%), Gaps = 56/341 (16%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P + ++ +L DP L+ W S+ P F+H+ +Y + + K+
Sbjct: 58 SLKSLLPAITPSHVSSLFSLNLDPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIV 117
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ ++ M+ + +AL+ + I RK+S+ + S++
Sbjct: 118 SDVPKIIVSMIKC-CYSAPDALFVSDI-----CRKMSKDDIT------------KLSLKC 159
Query: 214 YNILFTAFLSRGKNTYINHVYMETI---------------------------RCLFKQMV 246
YN L T G +N +Y E + + +M+
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP--NSFSYDYLIHGLCAQG 304
G+ PD F+ S I GY S V+ A R+F +M P N SY+ LIHGLC G
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEM-------PNRNEVSYNQLIHGLCEAG 272
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R A L MK P+ +Y +L+ L V + + L EM+E+ D ITY
Sbjct: 273 RIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYN 331
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+++ CR G A +LL ++ + L+ D TY +D L
Sbjct: 332 SLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFL 372
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 15/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I A L A + MK R L P R+Y F FL + +
Sbjct: 330 YNSLIAGQCRAGHLDSAYRLLSLMKE-RGL--VPDQRTYGC-FIDFLCKSNR-------V 378
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R LF + +G+ ++ + +I GY V++A +F +M + N PN+++++
Sbjct: 379 EEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKM-LSKNCSPNAYTFNA 437
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK- 354
LIHGLC+ G K A L D+M + G P+ ++N L+ + G+ ++ K L +M+
Sbjct: 438 LIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSG 497
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++PV TY ++ C G+ EA ++ +++ + + D +TYT L+
Sbjct: 498 EKPVAR-TYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLI 544
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 27/271 (9%)
Query: 136 DASTYHIMTR---KLGAAKMYQE-MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D T+++M K+G K ++ M ++ L+ F T + I + ++ +
Sbjct: 191 DIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTST-----SFILGYCRSKDVDS 245
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A VF+ M N + SYN L G+ ++ LF +M +D
Sbjct: 246 AFRVFEEMPNRNEV-------SYNQLIHGLCEAGR--------IDEAVSLFVRMKDDCCY 290
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++++ ++IKG N V+ A+ + +M + N +P+ +Y+ LI G C G +A
Sbjct: 291 PNVYTYTALIKGLCRKN-VHKAMGLLDEM-LERNLVPDLITYNSLIAGQCRAGHLDSAYR 348
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L MK +G VP ++Y + L + VEE + + E+ + I Y ++D C
Sbjct: 349 LLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYC 408
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ G+ EA L +++ +KN + YT+ L+
Sbjct: 409 KVGKVDEAGCLFEKMLSKNCSPNAYTFNALI 439
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y I F ++ ++ A +F + ++ Y++L + GK +
Sbjct: 365 YGCFIDFLCKSNRVEEARRLFDSLTEEG---VSANVIMYSVLIDGYCKVGK--------V 413
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ CLF++M++ P+ ++ N++I G + ++ +AL +F QM V P ++++
Sbjct: 414 DEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQM-VKMGLKPTVYTFNI 472
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI + QG +A + +M G P +++YN+ + G+V+E + +M E+
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEG 532
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
P D TY +++ + G A +LK +
Sbjct: 533 VPPDDFTYTSLIKAYGKLGLTYSAFDVLKSM 563
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 104/245 (42%), Gaps = 42/245 (17%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
+D CL+ + ++P R TY+ +A QE +D++ QM +
Sbjct: 484 DDAHKCLQKMMSSGEKPVAR----TYNAFIEVYCSAGKVQEAEDMMVQM-KEEGVPPDDF 538
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
Y ++I + KL F +K+ + +C PS +H +
Sbjct: 539 TYTSLIKAYG---KLGLTYSAFDVLKSMFDADCEPS--------------------HHTF 575
Query: 235 METIRCLFKQ--MVNDGIEPDIFSLNSMIKGYILSNHV------NDALRIFHQMGVVYNY 286
+ I+ LF + +V E + S+++ G + +++ + + +F +M +
Sbjct: 576 LSLIKQLFDKRYVVEKSGETGVESVSNF--GDVPGSNMWKMMEFDIVIELFEEMEK-HGC 632
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA---LALNGEVEE 343
P+S Y+ LI G+C A +L D+M+++G PS +N+++S L GE
Sbjct: 633 TPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAAN 692
Query: 344 TVKNL 348
V+++
Sbjct: 693 IVEDM 697
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 137/307 (44%), Gaps = 18/307 (5%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA 165
+LC ++ L D ++LF A Q + H Y+++ KLG ++ +D ++ QM
Sbjct: 63 QLCKLLELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQM-K 121
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
E+L+ I+ ++ +A +A + M E P+ +SYN++ ++
Sbjct: 122 DEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFE--PTFKSYNVVLEILVAGN 179
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+V F M++ GI P +++ ++K + + N V+ A + M +
Sbjct: 180 CPKVAPNV--------FYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDM-TKHG 230
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+PNS Y LIH L R A +L +EM G P +++N ++ L G + E
Sbjct: 231 CVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAA 290
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN------LIDGYTYTK 399
K M+ + D + ++ +CR G+ EA +L ++ N N LI+GY +
Sbjct: 291 KLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSG 350
Query: 400 LLDVLED 406
+ +D
Sbjct: 351 RFEEAKD 357
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ YN L ++ G+ + E L+K MV G EPD F+ N MI G
Sbjct: 334 PNTVLYNTLINGYVVSGR-------FEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKG 386
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ AL +M V + PN +Y LI G C QG + A ++ + M KG ++ Y
Sbjct: 387 YLVSALEFLDEM-VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGY 445
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N L+ AL +G++++ ++ EM K D T+ +++ +C+ + EA+ L +++
Sbjct: 446 NCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLL 505
Query: 389 KNLI-DGYTYTKLL 401
+ +I + TY L+
Sbjct: 506 EGVIANTVTYNTLI 519
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 14/270 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F + TY I+ ++E VVN M A T YN +I + K+ A
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVG-YNCLIGALCKDGKIQDA 461
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ ++ M + C+P I ++N L K ME L++ M+ +G+
Sbjct: 462 LQMYGEMSSKG---CKPDIYTFNSLIYGLCKNDK--------MEEALGLYRDMLLEGVIA 510
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + N++I ++ + A ++ +M L N +Y+ LI LC G T+ L
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDN-ITYNGLIKALCKTGATEKCLGL 569
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++M + PS S N L+++ G+V + ++ L +MI++ D +TY ++++ +C+
Sbjct: 570 IEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCK 629
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
GR EA+ L LQ K + D TY L+
Sbjct: 630 MGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I+ F + +A K + R C +YN L A G
Sbjct: 515 YNTLIHAFLRLELIQQAD---KLVGEMRFRGCPLDNITYNGLIKALCKTGAT-------- 563
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L +QM + I P I S N +I + + VNDAL+ M + P+ +Y+
Sbjct: 564 EKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM-IQRGLTPDIVTYNS 622
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC GR + A L + ++ KG P + +YN+L+S G + + L++ +
Sbjct: 623 LINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNG 682
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ IT+ +++ + E +L
Sbjct: 683 FIPNEITWSILINYFVKNNSDSEQFTIL 710
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 13/233 (5%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
EM D + Q +A YNT++ +A +L A + + MK S C P + +Y
Sbjct: 169 EMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS---GCAPDVVAY 225
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ GK + V +QM + +P++ + N+++ G S ++ AL
Sbjct: 226 SSFVYGLCKSGKVLDAHQV--------LEQMRDSHHDPNVVTYNTILDGLCKSGKIDTAL 277
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+ QM N Y ++ GLC GRT+ AR + + M R G P +Y+SLV+
Sbjct: 278 EMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNG 337
Query: 335 LALNGEVEETVKNLWEM-IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L G++EE V+ + EM +E +P + +TY +++ +C GR EA ++++E+
Sbjct: 338 LCKAGKIEEAVEAVREMAMEGCKP-NAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 130/289 (44%), Gaps = 40/289 (13%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSR 191
+ D TY+ + L A QE + ++ +M A S C + + Y++ +Y ++ K+
Sbjct: 183 VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA--SGCAPDVVAYSSFVYGLCKSGKVLD 240
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK---------------NTYINHVYME 236
A V + M++S + P++ +YN + GK +N V
Sbjct: 241 AHQVLEQMRDSHH---DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297
Query: 237 TI-------------RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
T+ R + + M G PD+ + +S++ G + + +A+ +M +
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM-AM 356
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV-----PSSKSYNSLVSALALN 338
PN+ +Y L+HGLC+ GR A + +EM G PS +YN+L+ L
Sbjct: 357 EGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKA 416
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
G +++ +K M + D ++Y T+++ + R GRA +A +L E++
Sbjct: 417 GRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 133/300 (44%), Gaps = 27/300 (9%)
Query: 99 PPR---FNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE 155
PP FN L N + Q P C L + + + + +Y+ + L + + E
Sbjct: 7 PPNSVTFN--ALVNGFSKQGRPGDCERLLETMAARD-IQPNVVSYNGLLEGLCKLERWHE 63
Query: 156 MDDVVNQMLA-----TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
+++V M++ TP Y+T++ + +A K+ + + K + SR L RP
Sbjct: 64 AEELVRDMISRGGRSTPDM----VTYSTLLSGYCKAGKVEESRELLKEVI-SRGL--RPD 116
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
Y + + + + E IR G P + + N++I G ++
Sbjct: 117 ALMYTKVVASLCKSARLGEALELLEEMIR--------AGCCPTLITFNTLISGCCREKNL 168
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
A + +M + +Y+ L+ GLC GR + A +L + MK G P +Y+S
Sbjct: 169 EMADSLLQKM-AASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSS 227
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
V L +G+V + + L +M + + +TY T+LD +C+ G+ A+++++++ + +
Sbjct: 228 FVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSD 287
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG---EVEET 344
PNS +++ L++G QGR + L + M + P+ SYN L+ L E EE
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDV 403
V+++ + P D +TY T+L C+ G+ E+ +LLKE+ ++ L D YTK++
Sbjct: 68 VRDMISRGGRSTP-DMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVAS 126
Query: 404 L 404
L
Sbjct: 127 L 127
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 128/264 (48%), Gaps = 46/264 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + + AV+VFK M+ + C+P++ +YN + + K+ +N M
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQNG---CKPNVVTYNTIIDSLC---KDRLVNDA-M 253
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL 287
+ +MV GI PD + NS++ G +N+A R+F +M V YN +
Sbjct: 254 D----FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNII 309
Query: 288 --------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
P+ +Y ++HGLC G+ A L +M++KG
Sbjct: 310 IDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGC 369
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P +YN+++ +L + V + ++ L EM+++ P + +TY T+L C G+ EA +
Sbjct: 370 KPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQ 429
Query: 382 LLKELQNKNLI-DGYTYTKLLDVL 404
L KE+ +N++ + T++ L+D L
Sbjct: 430 LFKEMVGRNVMPNTLTFSILVDGL 453
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+I K+ AV ++ M S + P + SYN L + G HV
Sbjct: 166 FTTLINGVCNEGKIKVAVELYNEMVRSGH---EPDVISYNTLINGLCNSGNTNMAVHV-- 220
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
FK+M +G +P++ + N++I VNDA+ +M V P++ +Y+
Sbjct: 221 ------FKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEM-VGRGIPPDAITYNS 273
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++HGLC G+ A L M++ G P +YN ++ +L + V + L EM+++
Sbjct: 274 IVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQG 333
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
P D +TY T+L +C G+ EA++L K+++ K D Y ++D L D
Sbjct: 334 IPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKD 386
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 18/277 (6%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTEALYNTIIYFFAEA 186
+Q + D Y+ + L ++ + + +++M+ P Y+TI++ F
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPP---NAVTYSTILHGFCNL 421
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
+L A +FK M RN+ P+ +++IL G + R +F+ M
Sbjct: 422 GQLDEATQLFKEMV-GRNV--MPNTLTFSILVDGLCQEG--------MVSEARWVFETMT 470
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
G+EP+I++ N+++ GY L +N+A ++F M V P+ SY+ LI+G C R
Sbjct: 471 EKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIM-VGKGCAPDLHSYNILINGYCNSRRM 529
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
A+ L +M K P++ +YN+++ L G + + + +M +TY +
Sbjct: 530 DKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSIL 589
Query: 367 LDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
L+ +C+ G EA+KL K ++ K L D YT L++
Sbjct: 590 LNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIE 626
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 136/282 (48%), Gaps = 23/282 (8%)
Query: 118 LVCLELFNWASK------QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--ATPSF 169
L CL N A++ Q + D TY+I+ L ++ + D +++M+ P
Sbjct: 278 LCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPD 337
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
T Y TI++ +L+ A+ +FK M+ C+P + +YN + + K+
Sbjct: 338 VVT---YTTILHGLCYLGQLNEAIRLFKKMEQKG---CKPDVVAYNTIIDSLC---KDRL 388
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+N ME +MV+ GI P+ + ++++ G+ +++A ++F +M V N +PN
Sbjct: 389 VNDA-ME----FLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM-VGRNVMPN 442
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ ++ L+ GLC +G AR + + M KG P+ +YN+L++ L ++ E K
Sbjct: 443 TLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFE 502
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
M+ K D +Y +++ C R +A LL ++ K L
Sbjct: 503 IMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKL 544
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
++ ++ + +S A +VF+ M + +E P+I +YN L + R K M
Sbjct: 446 FSILVDGLCQEGMVSEARWVFETM-TEKGVE--PNIYTYNALMNGYCLRCK--------M 494
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
R +F+ MV G PD+ S N +I GY S ++ A + QM V PN+ +Y+
Sbjct: 495 NEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSV-KKLTPNTVTYNT 553
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC GR +A+EL +M G +P+ +Y+ L++ L +G ++E +K M EK+
Sbjct: 554 IMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKK 613
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D I Y +++ + G+ A L +L + G TY ++ L
Sbjct: 614 LEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGL 663
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ L QM G+ ++SLN +I NHV+ A+ ++ +M P+ ++ L
Sbjct: 111 TVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKM-FKLGIQPDVITFTTL 169
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I+G+C +G+ K A EL +EM R G P SYN+L++ L +G V +M +
Sbjct: 170 INGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGC 229
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ +TY T++D +C+ +AM L E+ + + D TY ++
Sbjct: 230 KPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIV 275
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 19/135 (14%)
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
R L A +++++M + T Y+ ++ + L A+ +FK MK +
Sbjct: 563 RLLDAQELFKKM--------CSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKK- 613
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
P I Y IL GK +E + LF ++ DGI+P + N MIKG
Sbjct: 614 --LEPDIILYTILIEGMFIGGK--------LEVAKGLFSKLSADGIQPPGRTYNVMIKGL 663
Query: 265 ILSNHVNDALRIFHQ 279
+ ++A +F +
Sbjct: 664 LKEGLSDEAYELFRK 678
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 140/277 (50%), Gaps = 24/277 (8%)
Query: 138 STYHIMTRKL----GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+TY+++ L + Y+ ++++ + LA F YN +I + + +A+
Sbjct: 293 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFT-----YNILINGHCKEGNVKKAL 347
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F+ M SR R ++ +Y L A +G+ ET + LF + V GI PD
Sbjct: 348 EIFENM--SRR-GVRATVVTYTSLIYALSKKGQ-------VQETDK-LFDEAVRRGIRPD 396
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ N++I + S +++ A I +M P+ +Y+ L+ GLC GR AR+L
Sbjct: 397 LVLYNALINSHSTSGNIDRAFEIMGEMEK-KRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM ++G P +YN+L+S ++ G+V++ ++ EM+ K +TY ++ +C+
Sbjct: 456 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 515
Query: 374 GRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL--EDD 407
G+ +A ++KE+ +N D TY L++ L ED+
Sbjct: 516 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 139/313 (44%), Gaps = 39/313 (12%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R +A TY+ + + Q D++ +M + Y T+I + + ++ AV
Sbjct: 182 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 241
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTYI 230
VF M E +P YN L + +GK N +
Sbjct: 242 KVFDEMLTKG--EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 299
Query: 231 NHVYMETIRC----LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV 283
+ ++M+ L ++M G+ D+F+ N +I G+ +V AL IF M GV
Sbjct: 300 HALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 359
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+ +Y LI+ L +G+ + +L DE R+G P YN+L+++ + +G ++
Sbjct: 360 ATVV----TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 415
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ + EM +K+ D +TY T++ +C GR EA KL+ E+ + + D TY L+
Sbjct: 416 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLIS 475
Query: 403 --VLEDDFGNSIR 413
++ D +++R
Sbjct: 476 GYSMKGDVKDALR 488
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 24/252 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A K +RA+ + + M RP+ +YN + F SRG+ +
Sbjct: 157 FNIMLRHLCSAGKPARALELLRQMP-------RPNAVTYNTVIAGFCSRGRV----QAAL 205
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +R + ++ GI P+ ++ ++I G+ V++A+++F +M P + Y+
Sbjct: 206 DIMREMRER---GGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 262
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C QG+ A D M +G + +YN LV AL ++G E + + EM K
Sbjct: 263 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 322
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL-------DVLEDD 407
+D TY +++ C+ G +A+++ + + + + TYT L+ V E D
Sbjct: 323 LALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 382
Query: 408 --FGNSIRHHLR 417
F ++R +R
Sbjct: 383 KLFDEAVRRGIR 394
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 20/224 (8%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALY 176
LE+F S++ R TY + L QE D + ++ + P LY
Sbjct: 346 ALEIFENMSRR-GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV----LY 400
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +I + + + RA + M+ R P +YN L G+ ++
Sbjct: 401 NALINSHSTSGNIDRAFEIMGEMEKKR---IAPDDVTYNTLMRGLCLLGR--------VD 449
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
R L +M GI+PD+ + N++I GY + V DALRI ++M + + P +Y+ L
Sbjct: 450 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM-MNKGFNPTLLTYNAL 508
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
I GLC G+ +A + EM G P +Y SL+ L E
Sbjct: 509 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYN 177
LE+F + ++ DA TY+ + L + + + ++ M+ P+ AL +
Sbjct: 740 LEIF-YGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 798
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T F + L A ++K M P+I +YN L F +G+ H
Sbjct: 799 T----FVKEGNLLEAKNLYKEMIRR---SVHPNILTYNSLINGFCIQGRLGDAKH----- 846
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+F MV+ G PD+ + N++I G+ S V D +++F +M + ++F+Y+ LI
Sbjct: 847 ---MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-THQGLVGDAFTYNTLI 902
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
HG C G+ A+++ + M G P +YN L+ L NG++E+ + + ++ + Q
Sbjct: 903 HGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMD 962
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
VD ITY ++ +CR + EA L + L K + +D Y ++ L
Sbjct: 963 VDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 33/277 (11%)
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
+QE +V+ M A +YNT+I + R L+ A+ +F M+ +
Sbjct: 701 FQEAVSLVDSM-AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIV---ADAV 756
Query: 213 SYNILFTAFLSRGK---------------------------NTYINHVYMETIRCLFKQM 245
+YN L + + G+ +T++ + + L+K+M
Sbjct: 757 TYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM 816
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
+ + P+I + NS+I G+ + + DA +F M V P+ +Y+ LI G C R
Sbjct: 817 IRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLM-VSKGCFPDVVTYNTLITGFCKSKR 875
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
++ +L EM +G V + +YN+L+ G++ K M++ P D +TY
Sbjct: 876 VEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNI 935
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+LD +C G+ +A+ ++++LQ + +D TY ++
Sbjct: 936 LLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIII 972
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 129/291 (44%), Gaps = 22/291 (7%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL 175
D + LEL N K+ R D TY+ + L + +++ ++ M T +
Sbjct: 185 DVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDM--TKRRINPDVF 242
Query: 176 -YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+ +I F + L A ++K M S P+ +YN L G+ +
Sbjct: 243 TFTALIDAFVKQGNLDEAQELYKQMLQS---SIGPNTVTYNSLINGLCMHGRLYHAKKT- 298
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
F M + G P++ + N++I G+ S V D +++F +M G+V ++F
Sbjct: 299 -------FDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLV----GDTF 347
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LIHG C G+ + A+++ M G P ++ L+ L +NGE+ + +M
Sbjct: 348 TYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDM 407
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++ + + Y ++ +C+ + EA +L L + + D TYT ++
Sbjct: 408 RSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMI 458
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YNT+I + ++ A+ + M+ L + +YN L T G+
Sbjct: 171 VVYNTLIDCLCKNGDVNIALELLNEMEKKGRLA--ADLVTYNTLLTGLCYSGE------- 221
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ + R L + M I PD+F+ ++I ++ ++++A ++ QM + + PN+ +Y
Sbjct: 222 WRQAARIL-RDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM-LQSSIGPNTVTY 279
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LI+GLC GR +A++ D M KG P+ +YN+L++ + VE+ +K M
Sbjct: 280 NSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYR 339
Query: 354 KQRPVDFITYRTVLDEICRRGR 375
+ D TY T++ C+ G+
Sbjct: 340 EGLVGDTFTYNTLIHGYCQVGK 361
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ ++ A+ K +Y+F M+N L + S+ IL F +
Sbjct: 618 FTRVLTAIAKMNKFDIVIYLFHKMEN---LGISHDLYSFTILIHCFCRCSR--------F 666
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M+ G +P I +L S++ G+ N +A+ + M + PN Y+
Sbjct: 667 SLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL-GLEPNVVIYNT 725
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+GLC NA E+ M++KG V + +YN+L+S L +G + + L +M++++
Sbjct: 726 VINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRK 785
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ I + ++D + G EA L KE+ +++
Sbjct: 786 IDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSV 821
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 54/265 (20%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ +I+ F + S A+ + M L +PSI + L F + +
Sbjct: 653 FTILIHCFCRCSRFSLALALLGKMMK---LGFQPSIVTLGSLLNGFCQGNR-------FQ 702
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
E + L M G+EP++ N++I G + +N+AL IF+ M G+V ++ +
Sbjct: 703 EAVS-LVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIV----ADAVT 757
Query: 293 YDYLIHGLCAQGR-TKNARELCDEMKRK-------------GFV---------------- 322
Y+ LI GLC GR T AR L D +KRK FV
Sbjct: 758 YNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMI 817
Query: 323 -----PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
P+ +YNSL++ + G + + M+ K D +TY T++ C+ R
Sbjct: 818 RRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 877
Query: 378 EAMKLLKELQNKNLI-DGYTYTKLL 401
+ MKL E+ ++ L+ D +TY L+
Sbjct: 878 DGMKLFCEMTHQGLVGDAFTYNTLI 902
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 47/262 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ +I+ F +LS A+ + M L PSI ++ L F R + I+ +
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMK---LGYDPSIVTFGSLLHGFCLRNR---IHDAF- 155
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG---------VVYNY 286
L MV G EP++ N++I + VN AL + ++M V YN
Sbjct: 156 ----SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNT 211
Query: 287 L--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
L P+ F++ LI QG A+EL +M +
Sbjct: 212 LLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSS 271
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P++ +YNSL++ L ++G + K M K + +TY T+++ C+ R + M
Sbjct: 272 IGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGM 331
Query: 381 KLLKELQNKNLI-DGYTYTKLL 401
KL + + + L+ D +TY L+
Sbjct: 332 KLFQRMYREGLVGDTFTYNTLI 353
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 23/199 (11%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + +K ++ + +M G YNT+I+ + +A KL+ A V
Sbjct: 859 DVVTYNTLITGFCKSKRVEDGMKLFCEM-THQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 917
Query: 196 FKYMKNSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
F +R ++C P I +YNIL + GK +E + + + + ++ D
Sbjct: 918 F-----NRMVDCGVPPDIVTYNILLDCLCNNGK--------IEKALVMVEDLQKNQMDVD 964
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
I + N +I+G ++ V +A +F + GV + + +Y +I GLC G + A
Sbjct: 965 IITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLD----AIAYITMISGLCRNGLRREAD 1020
Query: 311 ELCDEMKRKGFVPSSKSYN 329
+LC MK GF+PS + Y+
Sbjct: 1021 KLCTRMKEDGFMPSERIYD 1039
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 15/178 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F ++R++ + +F+ M + +YN L + GK +
Sbjct: 314 YNTLINGFCKSRRVEDGMKLFQRMYREGLV---GDTFTYNTLIHGYCQVGK--------L 362
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F MV+ G+ PDI + ++ G ++ + A+ F+ M YL +Y+
Sbjct: 363 RVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYL-GIVAYNI 421
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG---EVEETVKNLWE 350
+IHGLC + + A EL + +G P +++Y ++ L NG E +E + + E
Sbjct: 422 MIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKE 479
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 99/246 (40%), Gaps = 49/246 (19%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I F +L A ++F M + C P + +YN L T F + +
Sbjct: 828 YNSLINGFCIQGRLGDAKHMFDLMVSK---GCFPDVVTYNTLITGFCKSKR--------V 876
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL 287
E LF +M + G+ D F+ N++I GY + +N A ++F++M V YN L
Sbjct: 877 EDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNIL 936
Query: 288 PNSF--------------------------SYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+ +Y+ +I G+C + K A L + RKG
Sbjct: 937 LDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGV 996
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+ +Y +++S L NG E K M E F+ + DE R + +
Sbjct: 997 KLDAIAYITMISGLCRNGLRREADKLCTRMKED----GFMPSERIYDETLRDHYTSLSAE 1052
Query: 382 LLKELQ 387
L+K +
Sbjct: 1053 LIKAVH 1058
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
++ + + + +++ + E LF +MV P + ++ I + + + F
Sbjct: 29 YSGYREKLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTA-IANLRRYETVIYF 87
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
Q ++ + +S+ LIH C R A + +M + G+ PS ++ SL+ L
Sbjct: 88 SQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCL 147
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGY 395
+ + + M++ + + Y T++D +C+ G A++LL E++ K + D
Sbjct: 148 RNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLV 207
Query: 396 TYTKLLDVL 404
TY LL L
Sbjct: 208 TYNTLLTGL 216
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 20/282 (7%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
CNV + + +E + SK F DA Y+ + L A + VV++ L
Sbjct: 343 FCNVNNMNK----AMEFLDEMSKDGCF-PDAVVYYTLICGLAQAGRLDDASSVVSK-LKE 396
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
FC YN +I F + KL RA M+ + +P +YN L + F S+
Sbjct: 397 AGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELA---GVKPDSVTYNTLISYF-SKIG 452
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
N + H +M+ K +G+ P +F+ ++I Y L+N++++A++IF +M V +
Sbjct: 453 NFKLAHKFMK------KMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASK 506
Query: 287 LP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+P N+ Y+ LI LC Q + A L D+MK +G +P++ +YNS+ AL +++
Sbjct: 507 VPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAF 566
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
K + M+E+ D+IT + + + GE KL K Q
Sbjct: 567 KLMDRMVEQACNPDYITMEILTEWL---SAVGEITKLKKFTQ 605
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG-----VVYNYLPNSFSYDY 295
L ++M + I+P + + +I ++DAL +F +M P++ Y+
Sbjct: 174 LMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNT 233
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC GR + A L +M+ P++ ++N L++ +GE+E K EM Q
Sbjct: 234 LIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQ 293
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ IT T++D +C+ R A++ + +Q K L + TYT ++
Sbjct: 294 IEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAF 343
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
NT++ + ++S AV F+ M+ + ++ N+ +T F+ N + N M
Sbjct: 302 NTLVDGMCKHNRISTAVEFFRVMQ-------QKGLKGNNVTYTVFI----NAFCNVNNMN 350
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+M DG PD ++I G + ++DA + ++ + + Y+ L
Sbjct: 351 KAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEA-GFCLDRVCYNVL 409
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ- 355
I C + + A+E +EM+ G P S +YN+L+S + G + K + +M E++
Sbjct: 410 ISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEG 469
Query: 356 -RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
P F TY ++ C EA+K+ KE+ N
Sbjct: 470 LSPTVF-TYGALIHAYCLNNNIDEAIKIFKEMNN 502
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 45/258 (17%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YNT+I + + A+ + M R+ +C P+ ++N L + G+
Sbjct: 230 MYNTLIDGLCKVGRQEEALCLMGKM---RSDQCAPTTATFNCLINGYCRSGE-------- 278
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL---RIFHQMGVVYNYL---- 287
+E LF +M N IEP++ +LN+++ G N ++ A+ R+ Q G+ N +
Sbjct: 279 IEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTV 338
Query: 288 ---------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
P++ Y LI GL GR +A + ++K G
Sbjct: 339 FINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAG 398
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
F YN L+S +++ + L EM D +TY T++ + G A
Sbjct: 399 FCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAH 458
Query: 381 KLLKELQNKNLIDGYTYT 398
K +K++ + + +T
Sbjct: 459 KFMKKMTEEEGLSPTVFT 476
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 96/227 (42%), Gaps = 40/227 (17%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N ++ +AR+ + + + MK+ + +P++ ++ IL INH+
Sbjct: 156 NALLTGLGKAREFGKMNLLMRKMKD---MNIQPTVITFGIL------------INHL--- 197
Query: 237 TIRCLFKQMVNDGIE-----------------PDIFSLNSMIKGYILSNHVNDALRIFHQ 279
C F++ ++D +E PD N++I G +AL + +
Sbjct: 198 ---CKFRR-IDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGK 253
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
M P + +++ LI+G C G + A +L +EM+ P+ + N+LV + +
Sbjct: 254 MRS-DQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHN 312
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ V+ M +K + +TY ++ C +AM+ L E+
Sbjct: 313 RISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEM 359
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 137/272 (50%), Gaps = 22/272 (8%)
Query: 138 STYHIMTRKL----GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+TY+++ L + Y+ ++++ + LA F YN +I + + +A+
Sbjct: 180 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT-----YNILINGHCKEGNVKKAL 234
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F+ M SR R ++ +Y L A +G+ ET + LF + V GI PD
Sbjct: 235 EIFENM--SRR-GVRATVVTYTSLIYALSKKGQ-------VQETDK-LFDEAVRRGIRPD 283
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ N++I + S +++ A I +M P+ +Y+ L+ GLC GR AR+L
Sbjct: 284 LVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 342
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM ++G P +YN+L+S ++ G+V++ ++ EM+ K +TY ++ +C+
Sbjct: 343 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 402
Query: 374 GRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
G+ +A ++KE+ +N D TY L++ L
Sbjct: 403 GQGDDAENMVKEMVENGITPDDSTYISLIEGL 434
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 42/316 (13%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY 176
P LEL + PR +A TY+ + + Q D++ +M + Y
Sbjct: 57 PARALELLR---QMPR--PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 111
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK---------- 226
T+I + + ++ AV VF M E +P YN L + +GK
Sbjct: 112 GTVISGWCKVGRVDEAVKVFDEMLTKG--EVKPEAVMYNALIGGYCDQGKLDTALLYRDR 169
Query: 227 -------------NTYINHVYMETIRC----LFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
N ++ ++M+ L ++M G+ PD+F+ N +I G+ +
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 229
Query: 270 VNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V AL IF M GV + +Y LI+ L +G+ + +L DE R+G P
Sbjct: 230 VKKALEIFENMSRRGVRATVV----TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV 285
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
YN+L+++ + +G ++ + + EM +K+ D +TY T++ +C GR EA KL+ E+
Sbjct: 286 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 345
Query: 387 QNKNL-IDGYTYTKLL 401
+ + D TY L+
Sbjct: 346 TKRGIQPDLVTYNTLI 361
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A K +RA+ + + M RP+ +YN + F SRG+ +
Sbjct: 44 FNIMLRHLCSAGKPARALELLRQMP-------RPNAVTYNTVIAGFCSRGRV----QAAL 92
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +R + ++ GI P+ ++ ++I G+ V++A+++F +M P + Y+
Sbjct: 93 DIMREMRER---GGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 149
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C QG+ A D M +G + +YN LV AL ++G E + + EM K
Sbjct: 150 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 209
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL-------DVLEDD 407
D TY +++ C+ G +A+++ + + + + TYT L+ V E D
Sbjct: 210 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 269
Query: 408 --FGNSIRHHLR 417
F ++R +R
Sbjct: 270 KLFDEAVRRGIR 281
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 20/224 (8%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALY 176
LE+F S++ R TY + L QE D + ++ + P LY
Sbjct: 233 ALEIFENMSRRG-VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLV----LY 287
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +I + + + RA + M+ R P +YN L G+ ++
Sbjct: 288 NALINSHSTSGNIDRAFEIMGEMEKKR---IAPDDVTYNTLMRGLCLLGR--------VD 336
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
R L +M GI+PD+ + N++I GY + V DALRI ++M + + P +Y+ L
Sbjct: 337 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM-MNKGFNPTLLTYNAL 395
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
I GLC G+ +A + EM G P +Y SL+ L E
Sbjct: 396 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 41/272 (15%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS----RGKNTYIN 231
YNTII + R+++ A +F M P I +YN L A + + T +N
Sbjct: 293 YNTIIDSLCKDRQVTEAFNLFSEMITKG---ISPDIFTYNSLIHALCNLCEWKHVTTLLN 349
Query: 232 H-----------VYMETIRCLFKQ------------MVNDGIEPDIFSLNSMIKGYILSN 268
V+ + L K+ M+ G+EPD+ + +++ G+ L +
Sbjct: 350 EMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRS 409
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A+++F M V +PN SY+ LI+G C R A L ++M +G + + +Y
Sbjct: 410 EMDEAVKVFDTM-VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTY 468
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+ L G ++ + EM+ + D +TYR +LD +C+ EAM LLK ++
Sbjct: 469 NTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEG 528
Query: 389 KNL----------IDGYTYTKLLDVLEDDFGN 410
NL IDG L+ D F N
Sbjct: 529 SNLDADILVYNIAIDGMCRAGELEAARDLFSN 560
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 13/227 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +I F R+L Y F + L C+P ++N L GK H
Sbjct: 189 NILINSFCHLRRLG---YAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALH---- 241
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
LF + + +G +PD+ + +++ G + + A+R+ M V N PN +Y+ +
Sbjct: 242 ----LFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSM-VQKNCRPNVIAYNTI 296
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I LC + A L EM KG P +YNSL+ AL E + L EM+ +
Sbjct: 297 IDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKI 356
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ + + TV+D +C+ G A ++ + + + D TYT L+D
Sbjct: 357 MPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMD 403
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ L QM + GI PD+++LN +I + + A + ++ + P++ +++ L
Sbjct: 168 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKL-LKLGCQPDNTTFNTL 226
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GLC +G+ A L D+ +GF P +Y +L++ L G ++ L M++K
Sbjct: 227 IRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNC 286
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ I Y T++D +C+ + EA L E+ K + D +TY L+ L
Sbjct: 287 RPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 335
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 105/256 (41%), Gaps = 48/256 (18%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
++ AV VF M + C P++RSYNIL N Y M+ L +QM
Sbjct: 410 EMDEAVKVFDTMVHKG---CVPNVRSYNILI--------NGYCQIQRMDKAMGLLEQMSL 458
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY----DYL------- 296
G+ D + N++I G + A+ +FH+M V +P+ +Y DYL
Sbjct: 459 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM-VASGQIPDLVTYRILLDYLCKNHHLA 517
Query: 297 ------------------------IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
I G+C G + AR+L + KG P ++YN ++
Sbjct: 518 EAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 577
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
L G ++E K +M E D Y T++ R A +LL+E+ +
Sbjct: 578 HGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFS 637
Query: 392 IDGYTYTKLLDVLEDD 407
D T T ++++L DD
Sbjct: 638 ADVSTTTLIVEMLSDD 653
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 13/256 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + L ++ + ++N+M+ + +++T++ + ++ A V
Sbjct: 324 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNS-KIMPNVVVFSTVVDALCKEGMIAIAHDV 382
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M R +E P + +Y L R + M+ +F MV+ G P++
Sbjct: 383 VDMMIK-RGVE--PDVVTYTALMDGHCLRSE--------MDEAVKVFDTMVHKGCVPNVR 431
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N +I GY ++ A+ + QM + + ++ +Y+ LIHGLC GR ++A L E
Sbjct: 432 SYNILINGYCQIQRMDKAMGLLEQMSL-QGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G +P +Y L+ L N + E + L + D + Y +D +CR G
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550
Query: 376 AGEAMKLLKELQNKNL 391
A L L +K L
Sbjct: 551 LEAARDLFSNLSSKGL 566
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + + NIL +F + Y V +++ G +PD + N++I+G +
Sbjct: 183 PDVYTLNILINSFCHLRRLGYAFSV--------LAKLLKLGCQPDNTTFNTLIRGLCVEG 234
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ +AL +F + + + P+ +Y L++GLC G T A L M +K P+ +Y
Sbjct: 235 KIGEALHLFDKT-IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAY 293
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+++ +L + +V E EMI K D TY +++ +C LL E+ N
Sbjct: 294 NTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN 353
Query: 389 KNLI-DGYTYTKLLDVLEDDFGNSIRH 414
++ + ++ ++D L + +I H
Sbjct: 354 SKIMPNVVVFSTVVDALCKEGMIAIAH 380
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 90/223 (40%), Gaps = 14/223 (6%)
Query: 154 QEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
Q MD + + ++ YNT+I+ +L A+ +F M S + P +
Sbjct: 444 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI---PDL 500
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
+Y IL +L + NH E + L K + ++ DI N I G + +
Sbjct: 501 VTYRILLD-YLCK------NHHLAEAM-VLLKAIEGSNLDADILVYNIAIDGMCRAGELE 552
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
A +F + P+ +Y+ +IHGLC +G A +L +M G YN++
Sbjct: 553 AARDLFSNLSS-KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTI 611
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+ + E + L EM+ + D T +++ + G
Sbjct: 612 IRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG 654
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 144/354 (40%), Gaps = 79/354 (22%)
Query: 118 LVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVN-----QMLATPSFCGT 172
+V F WA KQ + H YH M L + YQ M D++N +ML +FC
Sbjct: 37 MVAYRFFEWAEKQLHYTHSVRAYHTMIESLAKIRQYQIMWDLINAMKRKRMLNVETFC-- 94
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF----------- 221
I+ +A A+KL AVY F M+ + P++ ++N LF+A
Sbjct: 95 -----IIMRKYARAQKLEEAVYTFNVME---KYDVPPNLAAFNGLFSALCKSKNVRKAQE 146
Query: 222 -LSRGKNTYINHVYMETI--------------RCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
K+ ++ TI R +F++MV+ G PDI + M+
Sbjct: 147 IFDSSKDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCK 206
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH---------------------------- 298
+ V++AL I +M + P SF Y LIH
Sbjct: 207 AGRVDEALDIVKEMDLTICK-PTSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVA 265
Query: 299 -------GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
C + KN + +EM KG P+S++ N +++ L GE +E + M
Sbjct: 266 AYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRM 325
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
I+ P D TY ++ C R A+K+ K ++ K+ + +T++ L++ L
Sbjct: 326 IKVCEP-DADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVLINGL 378
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 24/257 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-TEALYNTIIYFFAEARKLSRAVY 194
D TY IM L A E D+V +M T C T +Y+ +I+ + ++ AV
Sbjct: 193 DIVTYGIMVDILCKAGRVDEALDIVKEMDLT--ICKPTSFIYSVLIHTYGIENRIEDAVD 250
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAF--LSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
F M+ + + + +YN L AF +++ KN Y R L +M G++P
Sbjct: 251 TFLGMEKN---GVKADVAAYNALIGAFCKVNKFKNVY---------RVL-NEMDYKGMQP 297
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ +LN ++ I ++A R+F +M V P++ +Y +I C + + A ++
Sbjct: 298 NSRTLNIILNNLIARGETDEAFRVFRRMIKVCE--PDADTYTMMIKMFCERNELEMALKV 355
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
MK+K FVPS +++ L++ L G+V L +MIEK +T+ + + +
Sbjct: 356 WKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIK 415
Query: 373 RGRAGEAMKLLKELQNK 389
GR +L+ LQ K
Sbjct: 416 EGRED----VLEFLQQK 428
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 139/277 (50%), Gaps = 24/277 (8%)
Query: 138 STYHIMTRKL----GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+TY+++ L + Y+ ++++ + LA F YN +I + + +A+
Sbjct: 253 ATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT-----YNILINGHCKEGNVKKAL 307
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F+ M SR R ++ +Y L A +G+ ET + LF + V GI PD
Sbjct: 308 EIFENM--SRR-GVRATVVTYTALIYALSKKGQ-------VQETDK-LFDEAVRRGIRPD 356
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ N++I + S +++ A I +M P+ +Y+ L+ GLC GR AR+L
Sbjct: 357 LVLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 415
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM +G P +YN+L+S ++ G+V++ ++ EM+ K +TY ++ +C+
Sbjct: 416 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 475
Query: 374 GRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL--EDD 407
G+ +A ++KE+ +N D TY L++ L ED+
Sbjct: 476 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 39/313 (12%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R +A TY+ + + Q D++ +M + Y T+I + + ++ AV
Sbjct: 142 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 201
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTYI 230
VF M E +P YN L + +GK N +
Sbjct: 202 KVFDEMLTKG--EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLV 259
Query: 231 NHVYMETIRC----LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV 283
+ ++M+ L ++M G+ PD+F+ N +I G+ +V AL IF M GV
Sbjct: 260 HALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVR 319
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+ +Y LI+ L +G+ + +L DE R+G P YN+L+++ + +G ++
Sbjct: 320 ATVV----TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 375
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ + EM +K+ D +TY T++ +C GR EA KL+ E+ + + D TY L+
Sbjct: 376 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 435
Query: 403 --VLEDDFGNSIR 413
++ D +++R
Sbjct: 436 GYSMKGDVKDALR 448
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A K +RA+ + + M RP+ +YN + F SRG+ +
Sbjct: 117 FNIMLRHLCSAGKPARALELLRQMP-------RPNAVTYNTVIAGFCSRGRV----QAAL 165
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +R + ++ GI P+ ++ ++I G+ V++A+++F +M P + Y+
Sbjct: 166 DIMREMRER---GGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 222
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C QG+ A D M +G + +YN LV AL ++G E + + EM K
Sbjct: 223 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 282
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL-------DVLEDD 407
D TY +++ C+ G +A+++ + + + + TYT L+ V E D
Sbjct: 283 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 342
Query: 408 --FGNSIRHHLR 417
F ++R +R
Sbjct: 343 KLFDEAVRRGIR 354
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 20/224 (8%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALY 176
LE+F S++ R TY + L QE D + ++ + P LY
Sbjct: 306 ALEIFENMSRR-GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV----LY 360
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +I + + + RA + M+ R P +YN L G+ ++
Sbjct: 361 NALINSHSTSGNIDRAFEIMGEMEKKR---IAPDDVTYNTLMRGLCLLGR--------VD 409
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
R L +M GI+PD+ + N++I GY + V DALRI ++M + + P +Y+ L
Sbjct: 410 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM-MNKGFNPTLLTYNAL 468
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
I GLC G+ +A + EM G P +Y SL+ L E
Sbjct: 469 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 29/281 (10%)
Query: 132 RFRHDASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFA 184
R HD +++I+ L A + +++MDD + + T Y+ +I
Sbjct: 74 RRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVIT---------YSVLIDGLC 124
Query: 185 EARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQ 244
+A ++S+AV + + MK +R C P + +Y IL K V ++
Sbjct: 125 KANRVSQAVELLESMK-ARG--CSPDVITYTILVDGLCKESKVAAAWEV--------LRE 173
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M++ G P++ + NS++ G + V+DAL + M PN +Y LI GLC G
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM-TCRGCTPNVVTYGTLIDGLCKVG 232
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R K+A + +M KG P YN L++ L +V+E++ L + D +TY
Sbjct: 233 RVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYS 292
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+V+ +CR R EA +LL ++++ D Y+ L+D L
Sbjct: 293 SVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 333
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 15/230 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I + + RA +F++MK+ +EC PS+ +YN L GK +
Sbjct: 13 YNSLIDGLCKNNEPDRAQELFEHMKS---VECSPSMVTYNTLLDGLFRTGK--------L 61
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF++M+ D D+ S N ++ G + + AL F +M + PN +Y
Sbjct: 62 ERAMALFQEML-DRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCS--PNVITYSV 118
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC R A EL + MK +G P +Y LV L +V + L EM++
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ +TY ++L +CR R +A+ L++++ + + TY L+D L
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 228
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 38/285 (13%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY I+ L +V+ +ML P+ YN++++ AR++S A
Sbjct: 147 DVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL----VTYNSLLHGLCRARRVSDA 202
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTY 229
+ + + M R C P++ +Y L G+ N
Sbjct: 203 LALMRDM-TCRG--CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNML 259
Query: 230 INHV----YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
IN + ++ L ++ V+ GI+PD+ + +S+I G SN +++A R+ +
Sbjct: 260 INGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS-RG 318
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+ Y LI GLC G+ A +L + M G +Y++L+ L G V+E
Sbjct: 319 CPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAH 378
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L M+ P +TY +++ +C EA++L++E++ N
Sbjct: 379 LLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSN 423
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 86/162 (53%), Gaps = 6/162 (3%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M + G EP++ + NS+I G +N + A +F M V P+ +Y+ L+ GL G
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSV-ECSPSMVTYNTLLDGLFRTG 59
Query: 305 RTKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
+ + A L EM R+ S+N LV+ L G++E ++ +M ++ P + ITY
Sbjct: 60 KLERAMALFQEMLDRRSH--DVISFNILVTGLCRAGKIETALEFFRKMDDRCSP-NVITY 116
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
++D +C+ R +A++LL+ ++ + D TYT L+D L
Sbjct: 117 SVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL 158
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 22/245 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I+ + + M +S+ + P + S+N + A GK T + V
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIM---PDVVSFNTVVDALCKEGKVTEAHDV-- 293
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+M+ G+EP++ + +++ G+ L + +++A+++F M V +PN SY+
Sbjct: 294 ------VDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTM-VCKGCMPNVISYNT 346
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C R A L EM R+ +P + +Y++L+ L +++ + EM+
Sbjct: 347 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 406
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVLE 405
+ + +TYR +LD +C+ EAM LLK ++ NL IDG L+
Sbjct: 407 QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 466
Query: 406 DDFGN 410
D F N
Sbjct: 467 DLFSN 471
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 10/215 (4%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L+R + F + L +P ++ L GK H LF +M+ +
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALH--------LFDKMIGE 160
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G PD+ + ++I G + + A+R+ M V N PN F+Y+ +I LC +
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM-VQKNCQPNVFAYNTIIDSLCKDRQVTE 219
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L EM KG P +YNSL+ AL E + L EM++ + D +++ TV+D
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+C+ G+ EA ++ ++ + + + TYT L+D
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMD 314
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 22/253 (8%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A + T+I K+ A+++F M RP + +Y L G +
Sbjct: 132 ATFTTLIRGIYVEGKIGEALHLFDKMIGE---GFRPDVVTYGTLINGLCKVGNTS----- 183
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
IR L MV +P++F+ N++I V +A +F +M V P+ F+Y
Sbjct: 184 --AAIR-LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM-VTKGISPDIFTY 239
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LIH LC K+ L +EM +P S+N++V AL G+V E + +MI+
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 299
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDV 403
+ + +TY ++D C EA+K+ + K LI+GY + +D
Sbjct: 300 RGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 359
Query: 404 LEDDFGNSIRHHL 416
FG R L
Sbjct: 360 AMYLFGEMCRQEL 372
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 127/322 (39%), Gaps = 56/322 (17%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLSRA 192
D +++ + L E DVV++M+ G E Y ++ ++ A
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQR----GVEPNVVTYTALMDGHCLLSEMDEA 325
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V VF M C P++ SYN L N Y ++ LF +M + P
Sbjct: 326 VKVFDTMVCK---GCMPNVISYNTLI--------NGYCKIQRIDKAMYLFGEMCRQELIP 374
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY----DYL------------ 296
D + +++I G + DA+ +FH+M V + +PN +Y DYL
Sbjct: 375 DTVTYSTLIHGLCHVERLQDAIALFHEM-VACSQIPNLVTYRILLDYLCKNRYLAEAMAL 433
Query: 297 -------------------IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
I G+C G + AR+L + KG P +Y+ +++ L
Sbjct: 434 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 493
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYT 396
G ++E K EM E ++ Y T+ R A++LL+E+ + D T
Sbjct: 494 RGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 553
Query: 397 YTKLLDVLEDD-FGNSIRHHLR 417
T + +L DD S++ LR
Sbjct: 554 MTLFVKMLSDDGLDQSLKQILR 575
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 8/206 (3%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINH-VYMETIRCL---FKQMVNDGIEPDIFSLNSMIKG 263
RPS L FLS N + + ++ TI F +M+ P N ++
Sbjct: 11 RPSGTQMLSLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTS 70
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
H + L + HQM + PN ++ LI+ C R A + ++ + G P
Sbjct: 71 IAKMKHHSTLLSLSHQMDS-FGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQP 129
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMI-EKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
+ ++ +L+ + + G++ E + +MI E RP D +TY T+++ +C+ G A++L
Sbjct: 130 DTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRP-DVVTYGTLINGLCKVGNTSAAIRL 188
Query: 383 LKELQNKNL-IDGYTYTKLLDVLEDD 407
L + KN + + Y ++D L D
Sbjct: 189 LGSMVQKNCQPNVFAYNTIIDSLCKD 214
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 12/210 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I+ +L A+ +F M + P++ +Y IL +L + + Y+
Sbjct: 379 YSTLIHGLCHVERLQDAIALFHEMVACSQI---PNLVTYRILLD-YLCKNR-------YL 427
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L K + ++PDI N I G + + A +F + P+ ++Y
Sbjct: 428 AEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS-KGLQPDVWTYSI 486
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+GLC +G A +L EM G + YN++ N E ++ L EM+ +
Sbjct: 487 MINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 546
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
D T + + G ++L+E
Sbjct: 547 FSADASTMTLFVKMLSDDGLDQSLKQILRE 576
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 121/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G K+ Q + D + + P T +NT++ + L + M+ S
Sbjct: 148 KEGEIKLAQSVFDAITKWGLRP----TAVSFNTLMNGYIRLGDLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K Y N LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESKMDYANE--------LFNEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 VTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H C +G K A+ + D + + G P++ S+N+L++
Sbjct: 123 FYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G+++E + M D TY +++ +C+ + A +L E+ + L+ +G
Sbjct: 183 RLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMKGL--KPDKVTYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGSCKEGD--------LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G+VPS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPS 415
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 21/271 (7%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
+D V L F W + PRFRHD TY M LG AK + ++ +++QM+ C
Sbjct: 357 DDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIK--DGCQPNV 414
Query: 175 L-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+ YN II+ + A L AV VFK M+ + C P +Y L G
Sbjct: 415 VTYNRIIHSYGRANYLQDAVNVFKQMQEA---GCEPDRVTYCTLIDIHAKSG-------- 463
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+++ ++++M + G+ PD F+ + MI + H+N A R+F +M V +PN +Y
Sbjct: 464 FLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRM-VDEGCVPNLVTY 522
Query: 294 DYLIHGLCAQGRTKN---ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+ +I Q + +N A +L +M++ GF P +Y ++ L G +EE E
Sbjct: 523 NIMI---ALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIE 579
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
M +K D Y ++D + G +A +
Sbjct: 580 MQKKNWVPDEPVYGLLVDLWGKSGNVQKAWE 610
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 235 METIRCLFKQM-VNDGIEPDIFSLNSMIKGYILSN---HVND---ALRIFHQMGVVYNYL 287
+E++ C+ +Q+ E I LN I Y + V+D AL F+ + + +
Sbjct: 317 VESVSCILQQLKWGPAAEEAIGKLNCSIDAYQANQILKRVDDHAVALGFFYWLKRLPRFR 376
Query: 288 PNSFSYDYLIHGLCAQGRTKNA-RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ +Y +I GL + + A +L D+M + G P+ +YN ++ + +++ V
Sbjct: 377 HDGHTYTTMI-GLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVN 435
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+M E D +TY T++D + G AM + +++Q+ L D +TY+ +++ L
Sbjct: 436 VFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCL 494
>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 393
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 135/284 (47%), Gaps = 24/284 (8%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY-----FFAEARK 188
+ D Y+ + L K+ + D+ ++M+ + YNT+IY + + RK
Sbjct: 36 KPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDV-VTYNTLIYSLLNFVYIKIRK 94
Query: 189 LSRAVYVFKYMKNSRNL-------ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ MK + L P+IR++ L G+ ++ R +
Sbjct: 95 -EYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGE--------VKKARNV 145
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
M+ +EP+I + NS++ GY L VN A ++F+ + + PN SY +I+GLC
Sbjct: 146 LAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISL-RGMTPNVRSYKVMINGLC 204
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
A L EM K VP + +YNSL+ L + + + + EM ++ +P + I
Sbjct: 205 KNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANII 264
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
TY ++LD +C+ + +A+ LL +++N+ + + YTYT L+D L
Sbjct: 265 TYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGL 308
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 15/224 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLE-CRPSIRSYNILFTAFLSRGKNTYINHVY 234
YN+++ + +++++A +F N+ +L P++RSY ++ KN ++
Sbjct: 161 YNSLMDGYFLVKEVNKAKQLF----NTISLRGMTPNVRSYKVMINGLC---KNKMVDEA- 212
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
LFK+M + + PD + NS+I G S + D +M N +Y+
Sbjct: 213 ----ANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHD-RGQPANIITYN 267
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GLC + A L ++K +G P+ +Y LV L NG + + + +++ K
Sbjct: 268 SLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNK 327
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGYTY 397
+D Y +++ +C+ G EA+ LL +++ NK DG TY
Sbjct: 328 GYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTY 371
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 21/271 (7%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
+D V L F W + PRFRHD TY M LG AK + ++ +++QM+ C
Sbjct: 357 DDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIK--DGCQPNV 414
Query: 175 L-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+ YN II+ + A L AV VFK M+ + C P +Y L G
Sbjct: 415 VTYNRIIHSYGRANYLQDAVNVFKQMQEA---GCEPDRVTYCTLIDIHAKSG-------- 463
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+++ ++++M + G+ PD F+ + MI + H+N A R+F +M V +PN +Y
Sbjct: 464 FLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRM-VDEGCVPNLVTY 522
Query: 294 DYLIHGLCAQGRTKN---ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+ +I Q + +N A +L +M++ GF P +Y ++ L G +EE E
Sbjct: 523 NIMI---ALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIE 579
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
M +K D Y ++D + G +A +
Sbjct: 580 MQKKNWVPDEPVYGLLVDLWGKSGNVQKAWE 610
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 235 METIRCLFKQM-VNDGIEPDIFSLNSMIKGYILSN---HVND---ALRIFHQMGVVYNYL 287
+E++ C+ +Q+ E I LN I Y + V+D AL F+ + + +
Sbjct: 317 VESVSCILQQLKWGPAAEEAIGKLNCSIDAYQANQILKRVDDHAVALGFFYWLKRLPRFR 376
Query: 288 PNSFSYDYLIHGLCAQGRTKNA-RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ +Y +I GL + + A +L D+M + G P+ +YN ++ + +++ V
Sbjct: 377 HDGHTYTTMI-GLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVN 435
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+M E D +TY T++D + G AM + +++Q+ L D +TY+ +++ L
Sbjct: 436 VFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCL 494
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 128/282 (45%), Gaps = 13/282 (4%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LE F+ + + + D +Y + L D+ +M+A YN ++
Sbjct: 80 LEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALV 139
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ +L A V + +R + P + +YN L A G+ ++
Sbjct: 140 DGLCKQDRLDAARAV---ITEARKRDFAPDVVTYNTLMAALFQLGR--------VDEALA 188
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
F QM +G P + S N++I G + + DAL +F++M + ++ PN +Y +I GL
Sbjct: 189 TFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEM-IDRDFHPNLVTYSVVIDGL 247
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C + A++L D M +G P +Y LV + G ++ + L M+ + D
Sbjct: 248 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 307
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
+TY V+D++C+ GR +A ++ +EL NK + TY+ L+
Sbjct: 308 VTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 349
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F A L A + + M + ++C R+ +I+ G+ +
Sbjct: 28 YNVLIRGFCNASDLDAAFSLLREM-DVEGMQCND--RTTSIILQGLCRCGRVAQALEHFD 84
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++ Q PD+ S ++I G V+ A +F +M PN+F+Y+
Sbjct: 85 ASLELAHAQ-------PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNA 137
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC Q R AR + E +++ F P +YN+L++AL G V+E + +M E+
Sbjct: 138 LVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 197
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK----NLIDGYTYTKLLDVL 404
+++ ++ +CR R +A+++ E+ ++ NL+ TY+ ++D L
Sbjct: 198 YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV---TYSVVIDGL 247
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 17/274 (6%)
Query: 128 SKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEAR 187
+++ F D TY+ + L E QM + T +N II AR
Sbjct: 158 ARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQM-TEEGYVPTLVSFNAIITGLCRAR 216
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L+ A+ VF M + + P++ +Y+++ + ++ + L +MV+
Sbjct: 217 RLADALEVFNEMIDR---DFHPNLVTYSVVIDGLCKSDQ--------LDEAQQLLDRMVS 265
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+G PD+ + ++ G+ + ++ AL + +M V +P+ +Y +I LC GR
Sbjct: 266 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM-VSQGCIPDVVTYTVVIDKLCKVGRVD 324
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A E+ E+ P+ +Y++L+ V+E K + EM RP + +TY T++
Sbjct: 325 DAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM--ACRP-NVVTYNTMI 381
Query: 368 DEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKL 400
+ R EA + +E+ + D TY L
Sbjct: 382 WGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTI 179
LE+FN + F + TY ++ L + E ++++M++ C + + Y +
Sbjct: 222 LEVFNEMIDRD-FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS--EGCRPDLVAYTPL 278
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ F+ A +L A+ + + M + C P + +Y ++ G+ ++
Sbjct: 279 VLGFSAAGRLDSALGLLRRMVSQ---GCIPDVVTYTVVIDKLCKVGR--------VDDAH 327
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+F+++V + P++ + +++I GY ++ V++ ++ +M PN +Y+ +I G
Sbjct: 328 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMAC----RPNVVTYNTMIWG 383
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
L R + A + EM GFVP +++Y L AL
Sbjct: 384 LSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 19/245 (7%)
Query: 183 FAEARKLSRAVYVFKYMKNSRN-----LECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGD--------I 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + G+ P + S N+++ GYI +++ R+ M + P+ ++Y
Sbjct: 153 RVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM-LASGVQPDVYTYSV 211
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM KG VP+ ++ +L+ NG V+ ++ +M+ +
Sbjct: 212 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSI 412
D ITY T++ +C++G +A L+ E+ K L D +TYT L+D E D +
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAF 331
Query: 413 RHHLR 417
H R
Sbjct: 332 EHRKR 336
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 125/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 148 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A +L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 372 MLSVGLKPDIGTYTMIIN 389
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
++KQM++ + PD+ + N++I G + A + +M + P+ F+Y LI G
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM-KGLKPDKFTYTTLIDGC 321
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A E M ++ +Y +L+S L G + K L EM+ D
Sbjct: 322 CKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDI 381
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQ 387
TY +++E C++G + KLLKE+Q
Sbjct: 382 GTYTMIINEFCKKGDVWKGSKLLKEMQ 408
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF-----HQMGVVYN---------------------- 285
DI+ + +I Y+ S + DA+ + H++ V ++
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 286 -------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++
Sbjct: 125 EDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 184
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M+ D TY +++ +C+ + +A +L E+ K L+ +G T+
Sbjct: 185 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 244
Query: 398 TKLLD 402
T L+D
Sbjct: 245 TTLID 249
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 115/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + KL +A ++ + NL +P++ +YN + + SRG+ +
Sbjct: 239 FNIMINVLCKEGKLKKAK---DFIGSMENLGVKPNVVTYNTVIHGYCSRGR--------V 287
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R + M N G+EPD ++ S+I G + +A I +M + LP + +Y+
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEI-GLLPTAVTYNT 346
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G A DEM R+ +P+ +YN L+ AL L G+++E + +M +
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
D ITY +++ CR G A +A L E+ +K + TYT L+ VL
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVL 456
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 32/259 (12%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---------- 221
T + YN +I+ K+ A + K M +S + P +YNIL +
Sbjct: 375 TVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIV---PDSITYNILINGYCRCGNAKKAF 431
Query: 222 ------LSRGKN----TYINHVY-------METIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+S+G TY + +Y M+ LF++++ +G PD+ N++I G+
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGH 491
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ +++ A + +M N +P+ +Y+ L+ G C +G+ + AREL EMKR+G P
Sbjct: 492 CANGNLDRAFALLKEMDK-RNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPD 550
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
SYN+L+S + G++ + EM+ +TY ++ +C+ + A +LLK
Sbjct: 551 HISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLK 610
Query: 385 ELQNKNLI-DGYTYTKLLD 402
E+ +K + D TY L++
Sbjct: 611 EMVSKGITPDDSTYFSLIE 629
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 26/271 (9%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA--LYNTIIYFFAEARKLSRAVYV 195
ST H++ + + + + DV +++ T GT++ +++ +I E ++ A
Sbjct: 131 STLHLLKQTIESR--VAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFEC 188
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F MK + P I ++N + + FL + ET+ L+ +M I+ ++
Sbjct: 189 FDMMKEKGVV---PKIETFNAMLSLFLKLNQT--------ETVWVLYAEMFRLKIKSTVY 237
Query: 256 SLNSMI-----KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+ N MI +G + D + +GV PN +Y+ +IHG C++GR + AR
Sbjct: 238 TFNIMINVLCKEGKL--KKAKDFIGSMENLGVK----PNVVTYNTVIHGYCSRGRVEGAR 291
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ D MK +G P S +Y SL+S + G++EE L +M E +TY T++D
Sbjct: 292 MVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGY 351
Query: 371 CRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
C +G +A E+ + ++ + LL
Sbjct: 352 CNKGDLVKAFGYRDEMVRRAILPTVSTYNLL 382
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 143/308 (46%), Gaps = 21/308 (6%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
LC M +++ L+ E+ K D TY I+ A + ++ ++M +
Sbjct: 298 LCEAMKVEKAFLLFQEM-----KSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSI 352
Query: 167 PSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
C + Y +++ + +A++L +A +F M ++ C P+ +Y+ L G
Sbjct: 353 G--CSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAG---CPPNTITYSALVDGLCKAG 407
Query: 226 KNTYINHVYMETIRC--------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+ VY + I F+ D I P++ + ++I G ++ V DA +
Sbjct: 408 EIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELL 467
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
M + PN YD LI G C G+ NA+E+ M + G++P+ +Y SL+ A+
Sbjct: 468 DAM-LSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFK 526
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYT 396
+ ++ +K L +M+E + +TY ++D +CR G +A+KLL ++ K + T
Sbjct: 527 DRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVT 586
Query: 397 YTKLLDVL 404
YT L+D L
Sbjct: 587 YTALIDGL 594
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 27/265 (10%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE---------------ALYNTIIYFF 183
TY + L A Q+ +V +++ T G++ Y +I
Sbjct: 395 TYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGL 454
Query: 184 AEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK 243
+A K+ A + M ++ C P+ Y+ L F GK V++ +C
Sbjct: 455 CKAHKVVDAQELLDAMLSNG---CEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKC--- 508
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
G P + + S+I ++ A+++ QM V + PN +Y +I GLC
Sbjct: 509 -----GYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQM-VESSCTPNVVTYTAMIDGLCRI 562
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G + A +L M+ KG P+ +Y +L+ L +G+V+ +++ +M K +++TY
Sbjct: 563 GECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTY 622
Query: 364 RTVLDEICRRGRAGEAMKLLKELQN 388
R +++ C G EA LL E++
Sbjct: 623 RVLINHCCAAGLLDEAHSLLSEMKQ 647
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 20/234 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I + R+L A+ V M S C P++ +Y + G+
Sbjct: 517 YTSLIDAMFKDRRLDLAMKVLSQMVES---SCTPNVVTYTAMIDGLCRIGE--------C 565
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L M G P++ + ++I G S V+ +L++F QM PN +Y
Sbjct: 566 QKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMST-KGCAPNYVTYRV 624
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+ CA G A L EMK+ + + Y S+V + L E +E
Sbjct: 625 LINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIAS---LGLLEELESH 681
Query: 356 RPVDFI-TYRTVLDEICRRGRAGEAMKLLKEL----QNKNLIDGYTYTKLLDVL 404
V Y ++D + GR EA++L KE+ + N+ YT L+ L
Sbjct: 682 GTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQAL 735
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 93/232 (40%), Gaps = 48/232 (20%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+L+N++++ + AR Y +K +K + C P +YNI F + G+
Sbjct: 178 SLFNSLVHSYCNARDYP---YAYKLLKRMADCGCPPGYVAYNI-FIGSICGGEEL----- 228
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
PD+ +L A +++ +M + + + N +
Sbjct: 229 ----------------PSPDLLAL---------------AEKVYEEM-LASSCVLNKVNT 256
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LC G+ A ++ M KGFVP + +Y+ +++ L +VE+ EM
Sbjct: 257 ANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS 316
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ----NKNLIDGYTYTKLL 401
D TY ++D C+ G +A E++ + N++ TYT LL
Sbjct: 317 VGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVV---TYTALL 365
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
E+K G+ PS +YN+LV LA G+++ + EM E +D T +C+ G
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 375 RAGEAMKLLK 384
R +A+ +++
Sbjct: 90 RWSDALVMIE 99
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 110/207 (53%), Gaps = 13/207 (6%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ +Y L R + M+ LF ++ +G+ PDI N++I G+ +
Sbjct: 423 QPTLVTYTSLIYVLGKRNR--------MKEADALFSKIQQEGLLPDIIVFNALIDGHCAN 474
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+++ A ++ +M + LP+ +Y+ L+ G C +G+ + AR+L DEMKR+G P S
Sbjct: 475 GNIDRAFQLLKEMDNM-KVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHIS 533
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN+L+S + G++++ + EM+ +TY ++ +C+ A +LLKE+
Sbjct: 534 YNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMV 593
Query: 388 NKNLI-DGYTYTKLLDVLE--DDF-GN 410
+K + D TY +++ +E DD GN
Sbjct: 594 SKGITPDDSTYLSIIEAMETVDDLEGN 620
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 110/230 (47%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + KL +A +M+ L +P++ +YN + RGK
Sbjct: 219 FNIMINVLCKEGKLKKAKEFIGHMET---LGVKPNVVTYNTIIHGHCLRGK--------F 267
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R +F+ M + G+EPD ++ NS I G + +A + +M + +PN+ +Y+
Sbjct: 268 QRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM-LEGGLVPNAVTYNA 326
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G A DEM KG + S +YN + AL + G + + + EM EK
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG 386
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
D +T+ +++ CR G A A LL E+ K + TYT L+ VL
Sbjct: 387 MMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVL 436
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK----NTYINHVYMETIRCLFK 243
KL+R + + R S+ ++NI+ GK +I H MET+
Sbjct: 193 KLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGH--METL----- 245
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
G++P++ + N++I G+ L A IF M P+ ++Y+ I GLC +
Sbjct: 246 -----GVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKD-KGLEPDCYTYNSFISGLCKE 299
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
GR + A L +M G VP++ +YN+L+ G++++ EMI K +TY
Sbjct: 300 GRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTY 359
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ + GR G+A ++KE++ K ++ D T+ L++
Sbjct: 360 NLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILIN 399
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 14/274 (5%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
K D TY+ L +E ++ +ML YN +I +
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG-GLVPNAVTYNALIDGYCNKGD 336
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L +A Y ++ S+ + S+ +YN+ A G+ M + K+M
Sbjct: 337 LDKA-YAYRDEMISKGI--MASLVTYNLFIHALFMEGR--------MGDADNMIKEMREK 385
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+ PD + N +I GY A + +M V P +Y LI+ L + R K
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEM-VGKGIQPTLVTYTSLIYVLGKRNRMKE 444
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L +++++G +P +N+L+ NG ++ + L EM + D ITY T++
Sbjct: 445 ADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQ 504
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
CR G+ EA +LL E++ + + D +Y L+
Sbjct: 505 GYCREGKVEEARQLLDEMKRRGIKPDHISYNTLI 538
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 12/168 (7%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
++N +I + RA F+ +K N++ P +YN L + GK
Sbjct: 463 VFNALIDGHCANGNIDRA---FQLLKEMDNMKVLPDEITYNTLMQGYCREGK-------- 511
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E R L +M GI+PD S N++I GY + DA R+ +M + + P +Y+
Sbjct: 512 VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM-MTTGFDPTILTYN 570
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
LI GLC ++A EL EM KG P +Y S++ A+ ++E
Sbjct: 571 ALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 12/221 (5%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T +++ ++ + E +K + A+ F +K + P+I + N + + FL +N
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFV---PNIETCNQMLSLFLK------LN 195
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
M + L+ +M I +++ N MI + A M + PN
Sbjct: 196 RTQMAWV--LYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETL-GVKPNVV 252
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ +IHG C +G+ + AR + MK KG P +YNS +S L G +EE + +M
Sbjct: 253 TYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM 312
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+E + +TY ++D C +G +A E+ +K ++
Sbjct: 313 LEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIM 353
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 17/228 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K +LEC S+ +NIL +F G+ +
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGE--------I 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + G+ P + S N+++ GYI +N+ R+ + M P+ ++Y
Sbjct: 153 RLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS-GVQPDVYTYSV 211
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM G VP+ ++ +L+ NG V+ ++ +M+ +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY T++ +C++G +A L+ E+ K L D TYT L+D
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 131/258 (50%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L+ + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVS----FNTLMNGYIKLGDLNEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L ++ TYT +++
Sbjct: 372 MLSVGLKLEIGTYTMIIN 389
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 26/255 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I+ + +++ A + M +C P YN L GK +
Sbjct: 95 YCILIHGLCQCQRIDEAYQLLDEMIQK---DCHPDAAVYNCLIAGLCKMGK--------I 143
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R + K M+ PD+ + S+I G +N +++A ++ +M P++ +Y+
Sbjct: 144 DAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKE-SGLTPDTVAYNA 202
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L++GLC Q + + +L +EM G P + SYN++V+ L +G+ EE K L +MIEK+
Sbjct: 203 LLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKK 262
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK----------NLIDGYTYT-KLLD-- 402
D +TY +++D C+ + EA +LL+++ + LI G++ +L D
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAY 322
Query: 403 -VLEDDFGNSIRHHL 416
V+ED F I L
Sbjct: 323 RVMEDMFKAGISPDL 337
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 19/264 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTI 179
LE A ++P D +Y+ + L + Y+E ++ +M+ CG + + YN++
Sbjct: 220 LEEMVEAGREP----DTFSYNTVVACLCESGKYEEAGKILEKMIEKK--CGPDVVTYNSL 273
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ F + K+ A + + M R C P++ +Y L F SR + ME
Sbjct: 274 MDGFCKVSKMDEAERLLEDMVGRR---CAPTVITYTTLIGGF-SRADRLADAYRVME--- 326
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
M GI PD+ + N ++ G + + +A + M V + P+ +Y L++G
Sbjct: 327 ----DMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVM-VEKDCAPDVVTYSILVNG 381
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC G+ +AR L + M +G P+ ++N+++ G+V+E K L M E D
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441
Query: 360 FITYRTVLDEICRRGRAGEAMKLL 383
+TY T++D C+ R +A +L
Sbjct: 442 VVTYSTLIDGYCKANRMQDAFAIL 465
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 125/275 (45%), Gaps = 14/275 (5%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
K+ D Y+ + L +E+ ++ +M+ T + YNT++ E+ K
Sbjct: 189 KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFS-YNTVVACLCESGK 247
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
A + + M + C P + +YN L F K M+ L + MV
Sbjct: 248 YEEAGKILEKMIEKK---CGPDVVTYNSLMDGFCKVSK--------MDEAERLLEDMVGR 296
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
P + + ++I G+ ++ + DA R+ M P+ +Y+ L+ GLC G+ +
Sbjct: 297 RCAPTVITYTTLIGGFSRADRLADAYRVMEDM-FKAGISPDLVTYNCLLDGLCKAGKLEE 355
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A EL + M K P +Y+ LV+ L G+V++ L M+E+ + +T+ T++D
Sbjct: 356 AHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMID 415
Query: 369 EICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
C+ G+ E K+L+ ++ + D TY+ L+D
Sbjct: 416 GFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLID 450
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 45/282 (15%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
A Y+ M+D+ + +P YN ++ +A KL A + + M +C P
Sbjct: 319 ADAYRVMEDMFKAGI-SPDL----VTYNCLLDGLCKAGKLEEAHELLEVMVEK---DCAP 370
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+ +Y+IL GK ++ R L + M+ G +P++ + N+MI G+ +
Sbjct: 371 DVVTYSILVNGLCKLGK--------VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGK 422
Query: 270 VNDALRIFHQMG--------VVYNYL--------------------PNSFSYDYLIHGLC 301
V++ ++ M V Y+ L P+ SY ++ GLC
Sbjct: 423 VDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLC 482
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+ G+ + A+E+ D M ++G P+S Y ++ L +E +K L M E+ +
Sbjct: 483 STGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLY 542
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
TY +++ +C+ R +A+ +L + K + D TYT L+D
Sbjct: 543 TYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLID 584
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+PS +Y L T F G + + + E M+ PD+ + N+++K Y
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANE--------MLARRFSPDVITHNTILKAYCQI 72
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++ AL F G ++ P +F+Y LIHGLC R A +L DEM +K P +
Sbjct: 73 GDLDRALSHFR--GKMWCS-PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAV 129
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN L++ L G+++ L M+E+ D ITY +++ C+ EA KL+++++
Sbjct: 130 YNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMK 189
Query: 388 NKNLI-DGYTYTKLLDVL 404
L D Y LL+ L
Sbjct: 190 ESGLTPDTVAYNALLNGL 207
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 26/248 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF-------------- 221
+NT+I F +A K+ V + MK + C P + +Y+ L +
Sbjct: 410 FNTMIDGFCKAGKVDEGHKVLELMKE---VSCTPDVVTYSTLIDGYCKANRMQDAFAILG 466
Query: 222 LSRGKNTYINHV-------YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+S K +Y + + +E + + M G P +I G ++AL
Sbjct: 467 ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEAL 526
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
++ M PN ++Y LI+GLC R ++A + D M KG VP +Y SL+
Sbjct: 527 KMLQVMSE-RGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDG 585
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-ID 393
+++ + M + D + Y ++ C+ G +A+++++ + K D
Sbjct: 586 FCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPD 645
Query: 394 GYTYTKLL 401
TY L+
Sbjct: 646 AATYFSLM 653
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 15/201 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-TEALYNTIIYFFAEARKLSRAVY 194
D ++Y M L + +E +V++ M T C T + Y II + + A+
Sbjct: 470 DKASYSSMLEGLCSTGKVEEAQEVMDLM--TKQGCPPTSSHYALIIGGLCDVERGDEALK 527
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ + M C P++ +Y+IL + +E + M+ G PD+
Sbjct: 528 MLQVMSERG---CEPNLYTYSILINGLCKTKR--------VEDAINVLDVMLEKGCVPDV 576
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ S+I G+ N ++ A + F M P+ +Y+ LI G C G + A E+
Sbjct: 577 ATYTSLIDGFCKINKMDAAYQCFKTMRD-SGCEPDKLAYNILISGFCQSGNVEKAIEVMQ 635
Query: 315 EMKRKGFVPSSKSYNSLVSAL 335
M KG P + +Y SL+ +L
Sbjct: 636 LMLEKGCNPDAATYFSLMRSL 656
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 13/229 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTII + ++ + A+ + M++ C+P SY L F K M
Sbjct: 633 YNTIIKGYCDSGNTTSALRILDLMRDG---GCKPDEWSYTELICGFCKISK--------M 681
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E+ LF +MV+DG+ P+ + ++I GY ++ A + M PN +Y+
Sbjct: 682 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR-SGCRPNVQTYNV 740
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL Q A ELC M +G P+ +Y +++ L NG ++ +MIE+
Sbjct: 741 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 800
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
+ +TY +++ + + G+ EA L EL+ LI D TY K+++
Sbjct: 801 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEA 849
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 38/257 (14%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------N 227
Y ++I L A+ VF M C P+ +Y+ L G+
Sbjct: 423 YTSMILGHCRKHDLDSALQVFNQMAKE---GCEPNTVTYSTLINGLCDSGRVNEAFDLIR 479
Query: 228 TYINHVYMET-------------IRC------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
I H + T + C LF M N G EP++++ ++I G +S
Sbjct: 480 EMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 539
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ A+ +FH+M GV PN+ +Y+ LI+ L R K A + + M R G +
Sbjct: 540 LLKVAIGLFHRMSRDGV----FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNI 595
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+YN ++ + G+ ++ + + M+++ + +TY T++ C G A+++L
Sbjct: 596 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 655
Query: 386 LQNKNL-IDGYTYTKLL 401
+++ D ++YT+L+
Sbjct: 656 MRDGGCKPDEWSYTELI 672
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 10/201 (4%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ YN + A G N ETI K++ + PD F+ SMI G+
Sbjct: 382 QPNLLIYNAVINALCKDG-----NVADAETI---MKKVFESEMSPDTFTYTSMILGHCRK 433
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ ++ AL++F+QM PN+ +Y LI+GLC GR A +L EM G +P++ +
Sbjct: 434 HDLDSALQVFNQM-AKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ AL G E+ + +M K + TY ++ +C G A+ L +
Sbjct: 493 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552
Query: 388 NKNLI-DGYTYTKLLDVLEDD 407
+ + TY L+++L ++
Sbjct: 553 RDGVFPNTVTYNALINILVEN 573
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 90/212 (42%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I + L A+ +F M P+ +YN L + +N I + ++
Sbjct: 528 YTALISGLCVSGLLKVAIGLFHRMSRDGVF---PNTVTYNALINILV---ENRRIKYAFV 581
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ M +G+ +I + N MIKGY + A+ + + M + + N +Y+
Sbjct: 582 -----VLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNM-LQRGHSANLVTYNT 635
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C G T +A + D M+ G P SY L+ ++E EM++
Sbjct: 636 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ +TY ++D C+ + A LL+ ++
Sbjct: 696 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 727
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 119/288 (41%), Gaps = 25/288 (8%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFCGTEAL 175
L++FN +K+ + TY + L + E D++ +M L T C +
Sbjct: 440 LQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 498
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ + +A +L F MKN C P++ +Y L + G +
Sbjct: 499 ALCDMGCYEDAWRL------FVDMKNK---GCEPNVYTYTALISGLCVSG--------LL 541
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF +M DG+ P+ + N++I + + + A + + MG N +Y+
Sbjct: 542 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR-NGLFTNIVTYNE 600
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C G K A + + M ++G + +YN+++ +G ++ L M +
Sbjct: 601 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 660
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +Y ++ C+ + A L E+ + L + TYT L+D
Sbjct: 661 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 708
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 19/270 (7%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY 176
PL L F + F+H T+ +M RKL + ++ QM C +E L+
Sbjct: 56 PLA-LHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC-SEDLF 113
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
++I + + RAV +F +K C PS++ YN + L + I +YM
Sbjct: 114 ISVISVYRQVGLAERAVEMFYRIK---EFGCDPSVKIYNHVLDTLLGENR---IQMIYM- 166
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+++ M DG EP++F+ N ++K +N V+ A ++ +M PN+ SY +
Sbjct: 167 ----VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS-NKGCCPNAVSYTTV 221
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I +C G K R+L + F P YN+L++ L + + V+ + EM+EK
Sbjct: 222 ISSMCEVGMVKEGRQLAER-----FEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGI 276
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ I+Y T+++E+ G+ A LL ++
Sbjct: 277 SPNVISYSTLINELSNSGQIELAFSLLAQM 306
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 30/253 (11%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
D+ NQM+ YNT++ F + +AV VF +M+ + C P+IR+Y L
Sbjct: 336 DMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEE---IGCSPNIRTYGSL 392
Query: 218 FTAFLSRGK---NTYINH------------VYMETIRCL-----FKQ-------MVNDGI 250
F RG YI + VY + L FK+ M +
Sbjct: 393 INGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENC 452
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P + + N+ IKG + ++ A ++F QM Y PN +Y+ L+ GL R + A
Sbjct: 453 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAY 512
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
L E+ +G S+ +YN+L+ G ++ + +M+ + D IT ++
Sbjct: 513 GLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAY 572
Query: 371 CRRGRAGEAMKLL 383
C++G+A A+++L
Sbjct: 573 CKQGKAERAVQML 585
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
++YN +I + R V + M P++ SY+ L + G+
Sbjct: 246 SVYNALINGLCKERDYKGGVELMSEMVEK---GISPNVISYSTLINELSNSGQ------- 295
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+E L QM+ G P+I +L+S++KG + DAL +++QM + PN +Y
Sbjct: 296 -IELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAY 354
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L+ G C+ G A + M+ G P+ ++Y SL++ G +E V +M+
Sbjct: 355 NTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLT 414
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+ + Y ++++ +CR + EA L++ + +N
Sbjct: 415 SGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKEN 451
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 10/185 (5%)
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
R +P++ +YN L F S G ++ +F M G P+I + S+I
Sbjct: 343 RGFGLQPNVVAYNTLVQGFCSHGN--------IDKAVSVFLHMEEIGCSPNIRTYGSLIN 394
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
G+ + A+ I+++M + PN Y ++ LC + K A L + M ++
Sbjct: 395 GFTKRGSLEGAVYIWNKM-LTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCA 453
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMK 381
PS ++N+ + L G ++ K +M ++ R P + +TY +LD + + R EA
Sbjct: 454 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYG 513
Query: 382 LLKEL 386
L +E+
Sbjct: 514 LTREI 518
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 132/282 (46%), Gaps = 28/282 (9%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARK 188
RF S Y+ + L + Y+ +++++M+ +P+ Y+T+I + + +
Sbjct: 240 RFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVIS----YSTLINELSNSGQ 295
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ A F + C P+I + + L RG ++ + IR
Sbjct: 296 IELA---FSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGF------- 345
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G++P++ + N++++G+ +++ A+ +F M + PN +Y LI+G +G +
Sbjct: 346 GLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEI-GCSPNIRTYGSLINGFTKRGSLEG 404
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI-TYRTVL 367
A + ++M G P+ Y S+V AL + + +E ++L E++ K+ + T+ +
Sbjct: 405 AVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEA-ESLIEIMSKENCAPSVPTFNAFI 463
Query: 368 DEICRRGRAGEAMKLLKELQNK-----NLIDGYTYTKLLDVL 404
+C GR A K+ ++++ + N++ TY +LLD L
Sbjct: 464 KGLCDAGRLDWAEKVFRQMEQQYRCPPNIV---TYNELLDGL 502
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI- 250
A++ FK + NS + P ++ ++ G+ +++++ L +QM G
Sbjct: 58 ALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQ--------VDSVQYLLQQMKLQGFH 107
Query: 251 -EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
D+F S+I Y A+ +F+++ + P+ Y++++ L + R +
Sbjct: 108 CSEDLFI--SVISVYRQVGLAERAVEMFYRIKE-FGCDPSVKIYNHVLDTLLGENRIQMI 164
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+ +MKR GF P+ +YN L+ AL N +V+ K L EM K + ++Y TV+
Sbjct: 165 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISS 224
Query: 370 ICRRGRAGEAMKLLKELQ 387
+C G E +L + +
Sbjct: 225 MCEVGMVKEGRQLAERFE 242
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 128/282 (45%), Gaps = 13/282 (4%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LE F+ + + + D +Y + L D+ +M+A YN ++
Sbjct: 30 LEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALV 89
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ +L A V + +R + P + +YN L A G+ ++
Sbjct: 90 DGLCKQDRLDAARAV---IAEARKRDFAPDVVTYNTLMAALFQLGR--------VDEALA 138
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
F QM +G P + S N++I G + + DAL +F++M + ++ PN +Y +I GL
Sbjct: 139 TFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEM-IDRDFHPNLVTYSVVIDGL 197
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C + A++L D M +G P +Y LV + G ++ + L M+ + D
Sbjct: 198 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 257
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
+TY V+D++C+ GR +A ++ +EL NK + TY+ L+
Sbjct: 258 VTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 299
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+PD+ S ++I G V+ A +F +M PN+F+Y+ L+ GLC Q R AR
Sbjct: 43 QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAAR 102
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ E +++ F P +YN+L++AL G V+E + +M E+ +++ ++ +
Sbjct: 103 AVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGL 162
Query: 371 CRRGRAGEAMKLLKELQNK----NLIDGYTYTKLLDVL 404
CR R +A+++ E+ ++ NL+ TY+ ++D L
Sbjct: 163 CRARRLADALEVFNEMIDRDFHPNLV---TYSVVIDGL 197
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 17/274 (6%)
Query: 128 SKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEAR 187
+++ F D TY+ + L E QM + T +N II AR
Sbjct: 108 ARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQM-TEEGYVPTLVSFNAIITGLCRAR 166
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L+ A+ VF M + + P++ +Y+++ + ++ + L +MV+
Sbjct: 167 RLADALEVFNEMIDR---DFHPNLVTYSVVIDGLCKSDQ--------LDEAQQLLDRMVS 215
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+G PD+ + ++ G+ + ++ AL + +M V +P+ +Y +I LC GR
Sbjct: 216 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM-VSQGCIPDVVTYTVVIDKLCKVGRVD 274
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A E+ E+ P+ +Y++L+ V+E K + EM RP + +TY T++
Sbjct: 275 DAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM--ACRP-NVVTYNTMI 331
Query: 368 DEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKL 400
+ R EA + +E+ + D TY L
Sbjct: 332 WGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTI 179
LE+FN + F + TY ++ L + E ++++M++ C + + Y +
Sbjct: 172 LEVFNEMIDRD-FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS--EGCRPDLVAYTPL 228
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ F+ A +L A+ + + M + C P + +Y ++ G+ ++
Sbjct: 229 VLGFSAAGRLDSALGLLRRMVSQ---GCIPDVVTYTVVIDKLCKVGR--------VDDAH 277
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+F+++V + P++ + +++I GY ++ V++ ++ +M PN +Y+ +I G
Sbjct: 278 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMAC----RPNVVTYNTMIWG 333
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
L R + A + EM GFVP +++Y L AL
Sbjct: 334 LSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 24/298 (8%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
+CN ++ ++ E+ W K D T+ I+ L + E V +M+
Sbjct: 289 MCNSGQWKQASILFKEMLEWNMKP-----DVVTFSILVDALCKEGVVLEALSVFGKMIQI 343
Query: 167 ---PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
P Y+++I+ ++ + + M SRN+ RP + +++I F
Sbjct: 344 AMEPDI----VTYSSLIHGVCKSSLWKESSTLLNEML-SRNI--RPDVVTFSIWVDVFCK 396
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
+G + + + M+ G+ P++ + NS++ GY L + +++A ++F M V
Sbjct: 397 KG--------MVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIM-VN 447
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
P+ SY+ LI G C R A++L DEM KG P+S ++ +L+S L G
Sbjct: 448 KGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYA 507
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
+ +M P D ITY T+L C+ G EA+ L + L+ L + K+L
Sbjct: 508 AKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKIL 565
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT---PSFCGTEALYNTIIYFFAEA 186
Q D TY + + + +++E ++N+ML+ P ++ + F +
Sbjct: 342 QIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV----VTFSIWVDVFCKK 397
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
+S A + M R L RP++ +YN L + Y H M+ R +F MV
Sbjct: 398 GMVSEAQSIINLMIE-RGL--RPNVVTYNSLM--------DGYCLHSQMDEARKVFDIMV 446
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
N G PD+ S N +IKGY S +++A ++F +M PNS ++ LI GLC GR
Sbjct: 447 NKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSH-KGLTPNSITHTTLISGLCQAGRP 505
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
A+EL +M G P +Y++L+S +G ++E + + + Q + + + +
Sbjct: 506 YAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKIL 565
Query: 367 LDEICRRGRAGEAMKLLKELQNKNL 391
L +C+ G+ +A +L L + L
Sbjct: 566 LGGMCKAGKLEDAKELFSSLSIEEL 590
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 126/270 (46%), Gaps = 14/270 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+ +Y I+ L ++ E D+ M + T YN++IY + + +A +
Sbjct: 243 EVVSYSIIIDSLCKNRLVNEAVDLFYHMRSI-GISPTVVTYNSLIYGMCNSGQWKQASIL 301
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
FK M +P + +++IL A G V +E + +F +M+ +EPDI
Sbjct: 302 FKEM---LEWNMKPDVVTFSILVDALCKEG-------VVLEALS-VFGKMIQIAMEPDIV 350
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +S+I G S+ ++ + ++M + N P+ ++ + C +G A+ + +
Sbjct: 351 TYSSLIHGVCKSSLWKESSTLLNEM-LSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINL 409
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +G P+ +YNSL+ L+ +++E K M+ K D ++Y ++ C+ R
Sbjct: 410 MIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSER 469
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
EA +L E+ +K L + T+T L+ L
Sbjct: 470 IDEAKQLFDEMSHKGLTPNSITHTTLISGL 499
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I ++ A+ Y+ SR + P++ ++ ++ GK T V+M
Sbjct: 177 FNTLINGLCIEGRIVEAMEQLDYIM-SRGYQ--PTVYTHTMIVNGLCKIGK-TSAAIVWM 232
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
K+MV EP++ S + +I + VN+A+ +F+ M + P +Y+
Sbjct: 233 -------KKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSI-GISPTVVTYNS 284
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G+C G+ K A L EM P +++ LV AL G V E + +MI+
Sbjct: 285 LIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIA 344
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +TY +++ +C+ E+ LL E+ ++N+ D T++ +DV
Sbjct: 345 MEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVF 394
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P I +N L A L R K + +++ ++++M G+ +++L +I
Sbjct: 102 PCITQFNQLLAA-LVRMK-------HYDSVVSIYRKMEFFGVSCSVYTLTILINCLC--- 150
Query: 269 HVNDALRIFHQMGVVY--NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
H++ F +G ++ + P+ +++ LI+GLC +GR A E D + +G+ P+
Sbjct: 151 HLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVY 210
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++ +V+ L G+ + + +M+E + ++Y ++D +C+ EA+ L +
Sbjct: 211 THTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHM 270
Query: 387 QN 388
++
Sbjct: 271 RS 272
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 32/218 (14%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
R D T+ I M E ++N M+ YN+++ + ++ A
Sbjct: 380 IRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIER-GLRPNVVTYNSLMDGYCLHSQMDEA 438
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAF-----LSRGKNTY------------INHVYM 235
VF M N C P + SYNIL + + K + I H +
Sbjct: 439 RKVFDIMVNKG---CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTL 495
Query: 236 ETIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+ C LFK+M + G PD+ + ++++ G+ H+++AL +F +
Sbjct: 496 ISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKK-SQ 554
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
PN L+ G+C G+ ++A+EL + + P
Sbjct: 555 LKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQP 592
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 19/233 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + R+ + A+Y F M + P++ +Y+ + F + G+ +
Sbjct: 214 YNTVIDSLCKDRRANEAMYFFSEMVDQG---IPPNVVTYSSILHGFCNLGQ--------L 262
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
LFKQM+ + P+ + ++ G + +A R+F M GV P++++
Sbjct: 263 NEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVE----PDAYT 318
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y L+ G C Q + A++L D M KGF PS + YN L++ + + E L EM
Sbjct: 319 YSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMY 378
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
++ D +TY T++ C+ GR A KL KE+ + L+ D TY+ LLD L
Sbjct: 379 DRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGL 431
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y++I++ F +L+ A +FK M RN+ P+ ++ IL G + +
Sbjct: 249 YSSILHGFCNLGQLNEATSLFKQMI-GRNV--MPNTVTFTILVDGLCKEG-------MIL 298
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R +F+ M +G+EPD ++ ++++ GY L + +++A ++F M V + P+ Y+
Sbjct: 299 EARR-VFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM-VGKGFAPSVRVYNI 356
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C R A+ L EM + P + +Y++L+ G + K EM
Sbjct: 357 LINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYG 416
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D ITY +LD +C+ G EA +LLK +Q +
Sbjct: 417 LLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKI 452
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 114/232 (49%), Gaps = 11/232 (4%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
++N ++ + + S + + K M S RP++ + IL ++ H
Sbjct: 70 VVFNKLLGSLVKKKHYSTVISLCKQMDLSN---IRPNVYTLTILINCLCHSNRDHV--HF 124
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ +FK G++P + +++ G + DA+++F ++G + + P+ +Y
Sbjct: 125 AFSALGKMFKL----GLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKM-GFAPSLITY 179
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+I GLC G T NA +L +M+ KG P +YN+++ +L + E + EM++
Sbjct: 180 TTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVD 239
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ P + +TY ++L C G+ EA L K++ +N++ + T+T L+D L
Sbjct: 240 QGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGL 291
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 14/273 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + E + + M+ F + +YN +I ++R+L+ A +
Sbjct: 315 DAYTYSALMDGYCLQSQMDEAQKLFDIMVGK-GFAPSVRVYNILINGHCKSRRLNEAKTL 373
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M + R+L P +Y+ L F G+ + + LFK+M + G+ PD
Sbjct: 374 LSEMYD-RDLT--PDTVTYSTLMQGFCQAGRP--------QVAQKLFKEMCSYGLLPDSI 422
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ + ++ G H+++A R+ M P+ Y+ LI G+C G+ + AREL
Sbjct: 423 TYSILLDGLCKHGHLDEAFRLLKAMQE-SKIEPHICIYNILIQGMCNFGKLEAARELFSN 481
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
+ KG PS +Y ++S L G E + +M+ + TY + R G
Sbjct: 482 LFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGD 541
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
A++L++E+ + D T+ LLD+ +D
Sbjct: 542 PSNAVRLIEEMVGRGFSADSSTFQMLLDLESND 574
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 127/272 (46%), Gaps = 14/272 (5%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R D Y + L K+ E D+ ++M A F Y T+I F A +L A
Sbjct: 147 RPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDV-ITYTTLICGFCLAGQLMEAF 205
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ M +N+ P+I +YN L GK ++ + L M G++PD
Sbjct: 206 GLLNEMI-LKNI--NPNIYTYNTLIDTLCKEGK--------VKESKNLLAVMTKKGVKPD 254
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + ++ GY L V A +IF M V P+ +SY+ +I+GLC R A L
Sbjct: 255 VVIYSILMDGYCLVGEVQKAKQIFLVM-VQTGVNPDVYSYNIIINGLCKGKRVDEAMNLL 313
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
EM K +P + +Y+SL+ L G + + EM + +P + +TY ++LD +C+
Sbjct: 314 REMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKN 373
Query: 374 GRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+A+ L +++ + + + YTYT L+D L
Sbjct: 374 QNLDKAIALFMKMKERGIQPNKYTYTALIDGL 405
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 111/218 (50%), Gaps = 10/218 (4%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K+ K ++ + RP + Y+ + K+ ++ Y L+ +M
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLC---KDKLVDEAYD-----LYSEMNA 178
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI PD+ + ++I G+ L+ + +A + ++M ++ N PN ++Y+ LI LC +G+ K
Sbjct: 179 RGIFPDVITYTTLICGFCLAGQLMEAFGLLNEM-ILKNINPNIYTYNTLIDTLCKEGKVK 237
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
++ L M +KG P Y+ L+ L GEV++ + M++ D +Y ++
Sbjct: 238 ESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIII 297
Query: 368 DEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ +C+ R EAM LL+E+ +KN+I D TY+ L+D L
Sbjct: 298 NGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGL 335
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + K+ + + M +P + Y+IL + G+ +
Sbjct: 223 YNTLIDTLCKEGKVKESKNLLAVMTKKG---VKPDVVIYSILMDGYCLVGE--------V 271
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + +F MV G+ PD++S N +I G V++A+ + +M + N +P++ +Y
Sbjct: 272 QKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREM-LHKNMIPDTVTYSS 330
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC GR +L EM +G + +YNSL+ L N +++ + +M E+
Sbjct: 331 LIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG 390
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
+ TY ++D +C+ GR + L + L K ID +TYT ++ L
Sbjct: 391 IQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGL 440
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 202 SRNLECR---PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
S+ +E + P + + +IL F G+ + V + ++ G +P+ LN
Sbjct: 33 SKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKL--------GYQPNTIILN 84
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+++KG L V +L FH V + + SY L++GLC G T+ A +L ++
Sbjct: 85 TLMKGLCLKGEVKKSLH-FHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIED 143
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+ P Y++++ L + V+E EM + D ITY T++ C G+ E
Sbjct: 144 RSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLME 203
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLDVL 404
A LL E+ KN+ + YTY L+D L
Sbjct: 204 AFGLLNEMILKNINPNIYTYNTLIDTL 230
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY--NYLPNSFSYD 294
T+ L KQM GI PD+ +L+ +I + H+ F +G + Y PN+ +
Sbjct: 28 TVISLSKQMEAKGIVPDLVTLSILINCFC---HLGQMAFSFSVLGKILKLGYQPNTIILN 84
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GLC +G K + D++ +GF SY L++ L GE +K L + ++
Sbjct: 85 TLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDR 144
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D + Y T++D +C+ EA L E+ + + D TYT L+
Sbjct: 145 STRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLI 192
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN II + +++ A+ + + M + + P +Y+ L G+ T
Sbjct: 293 YNIIINGLCKGKRVDEAMNLLREMLHKNMI---PDTVTYSSLIDGLCKLGRIT------- 342
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
TI L K+M + G ++ + NS++ G + +++ A+ +F +M G+ PN ++
Sbjct: 343 -TILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQ----PNKYT 397
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC GR K + L + KG+ +Y ++S L G +E + +M
Sbjct: 398 YTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKME 457
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ + +T+ ++ + + +A KLL E+ K L+
Sbjct: 458 DNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLL 497
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 18/151 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ + + L +A+ +F MK R ++ P+ +Y L G+ +
Sbjct: 363 YNSLLDGLCKNQNLDKAIALFMKMK-ERGIQ--PNKYTYTALIDGLCKGGR--------L 411
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ + LF+ ++ G D+++ MI G ++AL + +M G + PN+ +
Sbjct: 412 KKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCI----PNAVT 467
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
++ +I L + A +L EM KG +P
Sbjct: 468 FEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 115/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+IY F KL A+ + M P++ +YNIL A GK +
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKT---INPNVYTYNILVDALCKEGK--------V 285
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + M+ ++PD+ + ++++ GY L V A +F+ M ++ P+ +Y
Sbjct: 286 KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM-GVTPDVHTYTI 344
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C A L EM +K VP +Y+SL+ L +G + + EM ++
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRG 404
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+P + ITY +++D +C+ G A+ L +++++ + + +T+T LLD L
Sbjct: 405 QPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGL 454
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 119/261 (45%), Gaps = 29/261 (11%)
Query: 154 QEMDDVVNQ------MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
Q +DD V+Q M TP +N I+ FA+ + S AV + S LE
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPII----QFNKILDSFAKMKHYSTAVSL------SHRLEL 87
Query: 208 R---PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+ P + + NIL F G+ T+ V +++ G PD +LN++IKG
Sbjct: 88 KGIQPDLITLNILINCFCHMGQITFGFSV--------LAKILKRGYPPDTVTLNTLIKGL 139
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
L V AL FH + + N SY LI+G+C G T+ A +L ++ + P+
Sbjct: 140 CLKGQVKKALH-FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPN 198
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
Y++++ AL V E EM K D +TY T++ C G+ EA+ LL
Sbjct: 199 VVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLN 258
Query: 385 ELQNKNL-IDGYTYTKLLDVL 404
E+ K + + YTY L+D L
Sbjct: 259 EMVLKTINPNVYTYNILVDAL 279
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 28/283 (9%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY+I+ L +E V+ ML P Y+T++ + ++ +A +V
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVI----TYSTLMDGYFLVYEVKKAQHV 326
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M + P + +Y IL F KN ++ LFK+M + P I
Sbjct: 327 FNAMSL---MGVTPDVHTYTILINGFC---KNKMVDEALN-----LFKEMHQKNMVPGIV 375
Query: 256 SLNSMIKGYILSN---HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ +S+I G S +V D + H G N + +Y LI GLC G A L
Sbjct: 376 TYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVI----TYSSLIDGLCKNGHLDRAIAL 431
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++MK +G P++ ++ L+ L G +++ + +++ K ++ TY ++D C+
Sbjct: 432 FNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCK 491
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL--EDDFGNSI 412
+G EA+ +L ++++ I D T+ ++ L +D+ G ++
Sbjct: 492 QGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNV 534
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + + NIL F G+ T+ + +++ G PD + ++I G L
Sbjct: 958 QPDLFTLNILINCFCHMGQITFNFSI--------LAKILKRGYHPDTITFTTLINGLCLK 1009
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
VN AL FH + + N SY LI+G+C G T+ A +L ++ + P
Sbjct: 1010 GQVNKALH-FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVM 1068
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN+++ AL + V + +EM K D +TY T++ C G+ EA+ LL ++
Sbjct: 1069 YNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMV 1128
Query: 388 NKNL-IDGYTYTKLLDVL 404
K + + TY L+D L
Sbjct: 1129 LKTINPNVRTYNILVDAL 1146
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
GI+PD+F+LN +I + + I ++ + Y P++ ++ LI+GLC +G+
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKI-LKRGYHPDTITFTTLINGLCLKGQVNK 1014
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A D++ +GF + SY +L++ + G+ +K L ++ + D + Y T++D
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+C+ +A L E+ K + D TY L+
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLI 1108
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 37/190 (19%)
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+P++ +++I V++A +F +M V + +Y LI+G C +G+ K A
Sbjct: 196 KPNVVMYSTIIDALCKYQLVSEAYGLFSEM-TVKGISADVVTYSTLIYGFCIEGKLKEAI 254
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD-- 368
L +EM K P+ +YN LV AL G+V+E L M++ D ITY T++D
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314
Query: 369 ---------------------------------EICRRGRAGEAMKLLKELQNKNLIDG- 394
C+ EA+ L KE+ KN++ G
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374
Query: 395 YTYTKLLDVL 404
TY+ L+D L
Sbjct: 375 VTYSSLIDGL 384
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + YN + A K+ ++ Y LF +M GI D+ + N++I G+ +
Sbjct: 1063 KPDVVMYNTIIDALC---KHQLVSKAY-----GLFFEMNVKGISADVVTYNTLIYGFCIV 1114
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT--KNARELCDEMKRKGFVPSS 325
+ +A+ + ++M V+ PN +Y+ L+ LC +G+ + + +M+ G ++
Sbjct: 1115 GKLKEAIGLLNKM-VLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANA 1173
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ ++SAL E ++ K L EMI +
Sbjct: 1174 VTFEIIISALFEKDENDKVEKLLHEMIAR 1202
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 22/271 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+A Y+++ + AK+ + D+ +QM+A + N++IY F +L AV +
Sbjct: 209 NAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK-RISPDDFTCNSLIYGFCIMGQLKEAVGL 267
Query: 196 FKYMKNSRNLE-CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
M LE P + +++IL AF GK ++ + + + I D+
Sbjct: 268 LHKMI----LENINPRMYTFSILVDAFCKEGK--------VKEAKMMLGVTMKKDIILDV 315
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+ NS++ GY L +N A IF M GV+ N SY +I+GLC A
Sbjct: 316 VTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQ----SYTTMINGLCKIKMVDEAVN 371
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L +EM+ + +P+ +YNSL+ L G++ +K + EM ++ +P + ITY ++LD +C
Sbjct: 372 LFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALC 431
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ +A+ LL L+++ + D YTYT L+
Sbjct: 432 KNHHVDKAIALLTNLKDQGIRPDMYTYTVLI 462
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 45/226 (19%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
++NIL F G N+ V F +++ G +P+ + N++IKG L H++
Sbjct: 107 TFNILINCFSQLGLNSLSFSV--------FGKILKKGFDPNAITFNTLIKGLCLKGHIHQ 158
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN--- 329
AL FH V + + SY LI+GLC GR A +L + K P++ YN
Sbjct: 159 ALN-FHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMII 217
Query: 330 --------------------------------SLVSALALNGEVEETVKNLWEMIEKQRP 357
SL+ + G+++E V L +MI +
Sbjct: 218 DNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENIN 277
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
T+ ++D C+ G+ EA +L K++I D TY L+D
Sbjct: 278 PRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMD 323
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 123/274 (44%), Gaps = 31/274 (11%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + K + D+ + M + ++ Y T+I + + + AV +
Sbjct: 314 DVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQS-YTTMINGLCKIKMVDEAVNL 372
Query: 196 FKYMKNSRNLECR---PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK---QMVNDG 249
F+ M+ CR P++ +YN L GK I C+ K +M + G
Sbjct: 373 FEEMR------CRKIIPNVVTYNSLIDGLGKLGK-----------ISCVLKLVDEMHDRG 415
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRT 306
P+I + NS++ ++HV+ A+ + + G+ P+ ++Y LI GLC G+
Sbjct: 416 QPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGI----RPDMYTYTVLIKGLCQSGKL 471
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
++A+++ +++ KG+ +Y ++ + G + + L +M + + TY V
Sbjct: 472 EDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIV 531
Query: 367 LDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKL 400
+ + + A KLL+E+ + L+D +Y L
Sbjct: 532 ILSLFEKDENDMAEKLLREMIARGLLDEKSYIYL 565
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
P I N ++ + + H + AL + QM G+V ++ F+++ LI+ G
Sbjct: 68 PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDF----FTFNILINCFSQLGLNSL 123
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
+ + ++ +KGF P++ ++N+L+ L L G + + + +++ + +D ++Y T+++
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN 183
Query: 369 EICRRGRAGEAMKLLKELQNK 389
+C+ GR A++LLK + K
Sbjct: 184 GLCKVGRITAALQLLKRVDGK 204
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 123/256 (48%), Gaps = 32/256 (12%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------- 226
+N +++ F + ++ A VF + RPS+ S+N L ++ G
Sbjct: 138 FFNILMHRFCKEGEIRLAQSVFDAITKC---GLRPSVVSFNTLINGYIRLGDLDKGFRLK 194
Query: 227 ----------NTYINHVY---------METIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+ Y N V M+ LF +M++ G+ P+ + ++I G+ S
Sbjct: 195 TAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKS 254
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ AL I+ QM + Y P+ +Y+ LI+GLC +G K AR+L EM KG P +
Sbjct: 255 GRVDLALEIYKQM-LRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKIT 313
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L+ G++E + MIE+ +D + Y ++ +C+ GRA +A K+L+E+
Sbjct: 314 YTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREML 373
Query: 388 NKNL-IDGYTYTKLLD 402
+ L + TYT +++
Sbjct: 374 SVGLKPENGTYTMIIN 389
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF--------------------HQMGVVY-------- 284
DI+ + +I Y+ S + DA+ F H M + Y
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 285 ------NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C +G + A+ + D + + G PS S+N+L++
Sbjct: 125 KEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRL 184
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G++++ + M D T +++ +C+ + EA +L E+ +K L+ +G T+
Sbjct: 185 GDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTF 244
Query: 398 TKLLD 402
T L+D
Sbjct: 245 TTLID 249
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 16/150 (10%)
Query: 176 YNTIIYFFAEARKL--SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
YNT+IY L +R + V MK +P +Y L G
Sbjct: 279 YNTLIYGLCRKGDLKQARDLIVEMSMKG-----LKPDKITYTTLIDGSCKEGD------- 326
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ET L K+M+ + I D + ++I G DA ++ +M V P + +Y
Sbjct: 327 -LETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSV-GLKPENGTY 384
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+I+G C QG K A +L EM+R G VP
Sbjct: 385 TMIINGFCKQGDVKTASKLLKEMQRDGHVP 414
>gi|357516331|ref|XP_003628454.1| hypothetical protein MTR_8g058400, partial [Medicago truncatula]
gi|355522476|gb|AET02930.1| hypothetical protein MTR_8g058400, partial [Medicago truncatula]
Length = 303
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 22/285 (7%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
L +++ Q+DP + ++F + Q +R+ +Y ++ KLG AKM +M+ ++ Q+
Sbjct: 12 LSSLLRSQKDPSLAFQIF--LNPQNHYRYSILSYDLIITKLGRAKMIPQMELILQQLHND 69
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
E L +I F+A AR SRAV F + + R C P+++S+N L A L+ +
Sbjct: 70 TRHRVPEPLLCHVISFYARARLPSRAVQTFLSIPSFR---CTPTLKSFNSLLNALLTCRR 126
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
I H F +++ P+ + N +I+ + AL +F +M N
Sbjct: 127 FQTITH---------FASRLSEFGPPNTCTYNILIRSCFFQGRTDRALELFDEMRRT-NV 176
Query: 287 LPNSFSYDYLIHGLCAQGRTKNA----RELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
P+ ++ LIHGLC R A + + E K K P Y +L+ + GE+
Sbjct: 177 CPDQVTFGTLIHGLCKDSRMHQAFGMKKLMIQEFKLK---PCVSVYTNLMKGVCEIGELH 233
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ EM +D + Y T+++ + + GR EA+++L+E++
Sbjct: 234 RAFEIKDEMERNGLRLDVVVYNTLVNALFKAGRKEEALRVLEEMK 278
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 21/234 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+IY F A KL A+ + M P++ +YNIL A GK +
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLK---TINPNVYTYNILVDALCKEGK--------V 285
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + M+ ++PD+ + ++++ GY L + A +F+ M ++ P+ SY
Sbjct: 286 KEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLM-GVTPDVHSYTI 344
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C A L EM +K VP +Y+SL+ L +G + +W++I++
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY----VWDLIDEM 400
Query: 356 R----PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID-GYTYTKLLDVL 404
R P + ITY +++D +C+ G A+ L +++++ + +T+T LLD L
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGL 454
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 117/261 (44%), Gaps = 29/261 (11%)
Query: 154 QEMDDVVNQ------MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
Q +DD V+Q M TP +N I+ FA+ + S AV + S LE
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQ----FNKILDSFAKIKHYSTAVSL------SHRLEL 87
Query: 208 R---PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+ P + + NIL F G+ T+ V +++ G +P + ++IKG
Sbjct: 88 KGIQPDLITLNILINCFCHMGQITFGFSV--------LAKILKRGYQPHTITFTTLIKGL 139
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
L VN AL FH + + SY LI+G+C G T+ A +L ++ + P+
Sbjct: 140 CLKGQVNKALH-FHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPN 198
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ YN+++ AL V E EM K D +TY T++ C + EA+ LL
Sbjct: 199 VEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLN 258
Query: 385 ELQNKNL-IDGYTYTKLLDVL 404
E+ K + + YTY L+D L
Sbjct: 259 EMVLKTINPNVYTYNILVDAL 279
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 112/220 (50%), Gaps = 18/220 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I F + + + A+ +FK M + +N+ P I +Y+ L G+ +Y+
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEM-HQKNMV--PGIVTYSSLIDGLCKSGRISYVWD--- 395
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
L +M + GI ++ + NS+I G + H++ A+ +F++M G+ P SF+
Sbjct: 396 -----LIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGI----RPCSFT 446
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ L+ GLC GR K+A+E ++ KG+ YN +++ G +EE + L +M
Sbjct: 447 FTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKME 506
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
E + +T+ +++ + ++ +A KLL+++ + L+
Sbjct: 507 ENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 126/272 (46%), Gaps = 24/272 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL--YNTIIYFFAEARKLSRAVYVF 196
TY+I+ L +E +V+ ML C + Y+T++ + +L +A +VF
Sbjct: 271 TYNILVDALCKEGKVKEAKNVLAVMLKA---CVKPDVITYSTLMDGYFLVYELKKAQHVF 327
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M + P + SY IL F KN ++ E + LFK+M + P I +
Sbjct: 328 NAMSL---MGVTPDVHSYTILINGFC---KNKMVD----EALN-LFKEMHQKNMVPGIVT 376
Query: 257 LNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+S+I G S ++ + +M G+ N + +Y+ LI GLC G A L
Sbjct: 377 YSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVI----TYNSLIDGLCKNGHLDRAIALF 432
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
++MK +G P S ++ L+ L G +++ + +++ K +D Y +++ C++
Sbjct: 433 NKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQ 492
Query: 374 GRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
G EA+ +L +++ + + T+ +++ L
Sbjct: 493 GLLEEALTMLSKMEENGCVPNAVTFDIIINAL 524
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 37/190 (19%)
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+P++ N++I V++A +F +M + +Y LI+G C + K A
Sbjct: 196 KPNVEMYNTIIDALCKYQLVSEAYGLFSEM-TAKGISADVVTYTTLIYGFCIASKLKEAI 254
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD-- 368
L +EM K P+ +YN LV AL G+V+E L M++ D ITY T++D
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGY 314
Query: 369 ---------------------------------EICRRGRAGEAMKLLKELQNKNLIDG- 394
C+ EA+ L KE+ KN++ G
Sbjct: 315 FLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374
Query: 395 YTYTKLLDVL 404
TY+ L+D L
Sbjct: 375 VTYSSLIDGL 384
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 120/246 (48%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDSITKWGLRPSVVS----FNTLMNGYIKIGDLDEGFRLKSVMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P + +Y++L K M+ LF +M+B+G+ P+ + ++I G+
Sbjct: 202 -VHPDVYTYSVLINGLCKESK--------MDDANELFDEMLBNGLVPNXVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A +L DEM KG P
Sbjct: 253 KNGRVDLAMEIYRQM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H C +G + A+ + D + + G PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G+++E + M D TY +++ +C+ + +A +L E+ B L+ +
Sbjct: 183 KIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 12/148 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+IY + L +A + M + + L +P +Y L G +
Sbjct: 279 YNTLIYGLCKKGDLKQAHDLIDEM-SMKGL--KPDKITYTTLIDGXCKEGD--------L 327
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
ET K+M+ + I D + ++I G DA ++ +M V P +Y
Sbjct: 328 ETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSV-GLKPEIGTYTM 386
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVP 323
+I+ C +G +L EM+R G+VP
Sbjct: 387 IINEXCKKGDVWTGSKLLKEMQRXGYVP 414
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%), Gaps = 14/232 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
++ ++I++ E KL +A +M+ L +P++ SYN + + SRG
Sbjct: 175 SVKSSIVFDLLEG-KLKKAREFIGFMEG---LGFKPNVVSYNTIIHGYSSRGN------- 223
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+E R + M GIEPD ++ S+I G + +A +F +M V +PN+ +Y
Sbjct: 224 -IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKM-VEIGLVPNAVTY 281
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LI G C +G + A DEM +KG +PS +YN LV AL + G + E + EM +
Sbjct: 282 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 341
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
K D ITY +++ R G A A L E+ +K + + TYT L+ VL
Sbjct: 342 KGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVL 393
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 14/267 (5%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
STY+++ L E DD++ +M YN +I ++ RA +
Sbjct: 313 VSTYNLLVHALFMEGRMGEADDMIKEM-RKKGIIPDAITYNILINGYSRCGNAKRAFDLH 371
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M S+ +E P+ +Y L R + M+ LF+++++ G+ PD+
Sbjct: 372 NEML-SKGIE--PTHVTYTSLIYVLSRRNR--------MKEADDLFEKILDQGVSPDVIM 420
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N+MI G+ + +V A + +M + P+ +++ L+ G C +G+ + AR L DEM
Sbjct: 421 FNAMIDGHCANGNVERAFMLLKEMDR-KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 479
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
K +G P SYN+L+S G++++ EM+ +TY ++ +C+
Sbjct: 480 KXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEG 539
Query: 377 GEAMKLLKELQNKNL-IDGYTYTKLLD 402
A +LLKE+ NK + D TY L++
Sbjct: 540 DLAEELLKEMVNKGISPDDSTYLSLIE 566
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTII+ ++ + A + M+ + +E P +Y L + G+ +
Sbjct: 211 YNTIIHGYSSRGNIEGARRILDAMR-VKGIE--PDSYTYGSLISGMCKEGR--------L 259
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF +MV G+ P+ + N++I GY + A +M V +P+ +Y+
Sbjct: 260 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM-VKKGIMPSVSTYNL 318
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+H L +GR A ++ EM++KG +P + +YN L++ + G + EM+ K
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+TY +++ + RR R EA L +++ ++ +
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 414
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 22/212 (10%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY + L +E DD+ ++L +P ++N +I + RA +
Sbjct: 385 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI----MFNAMIDGHCANGNVERAFML 440
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
K M P ++N L GK +E R L +M GI+PD
Sbjct: 441 LKEMDRK---SVPPDEVTFNTLMQGRCREGK--------VEEARMLLDEMKXRGIKPDHI 489
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N++I GY + DA + +M + + P +Y+ LI LC A EL E
Sbjct: 490 SYNTLISGYGRRGDIKDAFXVRDEM-LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 548
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
M KG P +Y SL+ + G V+ V++
Sbjct: 549 MVNKGISPDDSTYLSLIEGM---GNVDTLVED 577
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 13/229 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTII + ++ + A+ + M++ C+P SY L F K M
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDG---GCKPDEWSYTELICGFCKISK--------M 511
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E+ LF +MV+DG+ P+ + ++I GY ++ A + M PN +Y+
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR-SGCRPNVQTYNV 570
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL Q A ELC M +G P+ +Y +++ L NG ++ +MIE+
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
+ +TY +++ + + G+ EA L EL+ LI D TY K+++
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEA 679
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 38/257 (14%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------N 227
Y ++I L A+ VF M C P+ +Y+ L G+
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAKE---GCEPNTVTYSTLINGLCDSGRVNEAFDLIR 309
Query: 228 TYINHVYMET-------------IRC------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
I H + T + C LF M N G EP++++ ++I G +S
Sbjct: 310 EMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 369
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ A+ +FH+M GV PN+ +Y+ LI+ L R K A + + M R G P+
Sbjct: 370 LLKVAIGLFHRMSRDGV----FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+YN ++ + G+ ++ + + M+++ + +TY T++ C G A+++L
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485
Query: 386 LQNKNL-IDGYTYTKLL 401
+++ D ++YT+L+
Sbjct: 486 MRDGGCKPDEWSYTELI 502
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 10/201 (4%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ YN + A G N ETI K++ + PD F+ SMI G+
Sbjct: 212 QPNLLIYNAVINALCKDG-----NVADAETI---MKKVFESEMSPDTFTYTSMILGHCRK 263
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ ++ AL++F+QM PN+ +Y LI+GLC GR A +L EM G +P++ +
Sbjct: 264 HDLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ AL G E+ + +M K + TY ++ +C G A+ L +
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 388 NKNLI-DGYTYTKLLDVLEDD 407
+ + TY L+++L ++
Sbjct: 383 RDGVFPNTVTYNALINILVEN 403
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I + L A+ +F M P+ +YN L + +N I + ++
Sbjct: 358 YTALISGLCVSGLLKVAIGLFHRMSRDGVF---PNTVTYNALINILV---ENRRIKYAFV 411
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ M +G P+I + N MIKGY + A+ + + M + + N +Y+
Sbjct: 412 -----VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM-LQRGHSANLVTYNT 465
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C G T +A + D M+ G P SY L+ ++E EM++
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ +TY ++D C+ + A LL+ ++
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 25/288 (8%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFCGTEAL 175
L++FN +K+ + TY + L + E D++ +M L T C +
Sbjct: 270 LQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ + +A +L F MKN C P++ +Y L + G +
Sbjct: 329 ALCDMGCYEDAWRL------FVDMKNK---GCEPNVYTYTALISGLCVSG--------LL 371
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF +M DG+ P+ + N++I + + + A + + MG PN +Y+
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR-NGCSPNIVTYNE 430
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C G K A + + M ++G + +YN+++ +G ++ L M +
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +Y ++ C+ + A L E+ + L + TYT L+D
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
F+Y L+ L G T + M +G P+ YN++++AL +G V + + +
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
+ E + D TY +++ CR+ A+++ ++ + + TY+ L++ L D
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 297
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 13/229 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTII + ++ + A+ + M++ C+P SY L F K M
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDG---GCKPDEWSYTELICGFCKISK--------M 511
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E+ LF +MV+DG+ P+ + ++I GY ++ A + M PN +Y+
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR-SGCRPNVQTYNV 570
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL Q A ELC M +G P+ +Y +++ L NG ++ +MIE+
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
+ +TY +++ + + G+ EA L EL+ LI D TY K+++
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEA 679
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 38/257 (14%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------N 227
Y ++I L A+ VF M C P+ +Y+ L G+
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAKE---GCEPNTVTYSTLINGLCDSGRVNEAFDLIR 309
Query: 228 TYINHVYMET-------------IRC------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
I H + T + C LF M N G EP++++ ++I G +S
Sbjct: 310 EMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 369
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ A+ +FH+M GV PN+ +Y+ LI+ L R K A + + M R G P+
Sbjct: 370 LLKVAIGLFHRMSRDGV----FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+YN ++ + G+ ++ + + M+++ + +TY T++ C G A+++L
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485
Query: 386 LQNKNL-IDGYTYTKLL 401
+++ D ++YT+L+
Sbjct: 486 MRDGGCKPDEWSYTELI 502
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 10/201 (4%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ YN + A G N ETI K++ + PD F+ SMI G+
Sbjct: 212 QPNLLIYNAVINALCKDG-----NVADAETI---MKKVFESEMSPDTFTYTSMILGHCRK 263
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ ++ AL++F+QM PN+ +Y LI+GLC GR A +L EM G +P++ +
Sbjct: 264 HDLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ AL G E+ + +M K + TY ++ +C G A+ L +
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 388 NKNLI-DGYTYTKLLDVLEDD 407
+ + TY L+++L ++
Sbjct: 383 RDGVFPNTVTYNALINILVEN 403
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I + L A+ +F M P+ +YN L + +N I + ++
Sbjct: 358 YTALISGLCVSGLLKVAIGLFHRMSRDGVF---PNTVTYNALINILV---ENRRIKYAFV 411
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ M +G P+I + N MIKGY + A+ + + M + + N +Y+
Sbjct: 412 -----VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM-LQRGHSANLVTYNT 465
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C G T +A + D M+ G P SY L+ ++E EM++
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ +TY ++D C+ + A LL+ ++
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 25/288 (8%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFCGTEAL 175
L++FN +K+ + TY + L + E D++ +M L T C +
Sbjct: 270 LQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ + +A +L F MKN C P++ +Y L + G +
Sbjct: 329 ALCDMGCYEDAWRL------FVDMKNK---GCEPNVYTYTALISGLCVSG--------LL 371
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF +M DG+ P+ + N++I + + + A + + MG PN +Y+
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR-NGCSPNIVTYNE 430
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C G K A + + M ++G + +YN+++ +G ++ L M +
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +Y ++ C+ + A L E+ + L + TYT L+D
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
F+Y L+ L G T + M +G P+ YN++++AL +G V + + +
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
+ E + D TY +++ CR+ A+++ ++ + + TY+ L++ L D
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 297
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 13/229 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTII + ++ + A+ + M++ C+P SY L F K M
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDG---GCKPDEWSYTELICGFCKISK--------M 511
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E+ LF +MV+DG+ P+ + ++I GY ++ A + M PN +Y+
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR-SGCRPNVQTYNV 570
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL Q A ELC M +G P+ +Y +++ L NG ++ +MIE+
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
+ +TY +++ + + G+ EA L EL+ LI D TY K+++
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEA 679
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 38/257 (14%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------N 227
Y ++I L A+ VF M C P+ +Y+ L G+
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAKE---GCEPNTVTYSTLINGLCDSGRVNEAFDLIR 309
Query: 228 TYINHVYMET-------------IRC------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
I H + T + C LF M N G EP++++ ++I G +S
Sbjct: 310 EMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSG 369
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ A+ +FH+M GV PN+ +Y+ LI+ L R K A + + M R G P+
Sbjct: 370 ILKVAIGLFHRMSRDGV----FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+YN ++ + G+ ++ + + M+++ + +TY T++ C G A+++L
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485
Query: 386 LQNKNL-IDGYTYTKLL 401
+++ D ++YT+L+
Sbjct: 486 MRDGGCKPDEWSYTELI 502
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 10/201 (4%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ YN + A G N ETI K++ + PD F+ SMI G+
Sbjct: 212 QPNLLIYNAVINALCKDG-----NVADAETI---MKKVFESEMSPDTFTYTSMILGHCRK 263
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ ++ AL++F+QM PN+ +Y LI+GLC GR A +L EM G +P++ +
Sbjct: 264 HDLDSALQVFNQMAK-EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHT 322
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ AL G E+ + +M K + TY ++ +C G A+ L +
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382
Query: 388 NKNLI-DGYTYTKLLDVLEDD 407
+ + TY L+++L ++
Sbjct: 383 RDGVFPNTVTYNALINILVEN 403
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I + L A+ +F M P+ +YN L + +N I + ++
Sbjct: 358 YTALISGLCVSGILKVAIGLFHRMSRDGVF---PNTVTYNALINILV---ENRRIKYAFV 411
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ M +G P+I + N MIKGY + A+ + + M + + N +Y+
Sbjct: 412 -----VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM-LQRGHSANLVTYNT 465
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C G T +A + D M+ G P SY L+ ++E EM++
Sbjct: 466 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 525
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ +TY ++D C+ + A LL+ ++
Sbjct: 526 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 25/288 (8%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFCGTEAL 175
L++FN +K+ + TY + L + E D++ +M L T C +
Sbjct: 270 LQVFNQMAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ + +A +L F MKN C P++ +Y L + G +
Sbjct: 329 ALCDMGCYEDAWRL------FVDMKNK---GCEPNVYTYTALISGLCVSG--------IL 371
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF +M DG+ P+ + N++I + + + A + + MG PN +Y+
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR-NGCSPNIVTYNE 430
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C G K A + + M ++G + +YN+++ +G ++ L M +
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +Y ++ C+ + A L E+ + L + TYT L+D
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
F+Y L+ L G T + M +G P+ YN++++AL +G V + + +
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
+ E + D TY +++ CR+ A+++ ++ + + TY+ L++ L D
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCD 297
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + ++ A V MK L P I +YNI+ + +R K +
Sbjct: 150 YNAVISGFCKVNQIEAATQVLNRMKARGFL---PDIVTYNIMIGSLCNRRK--------L 198
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ Q++ D P + + +I+ I+ +N+A+++ +M + LP+ ++Y+
Sbjct: 199 GLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM-LARGLLPDMYTYNA 257
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C +G + A EL + KG P SYN L+ A G+ +E K + EM +
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ +TY ++ +CR GR EA+ +LK + K L D Y+Y L+ L
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 367
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 31/239 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YN II + + RA + + + C P + SYNIL AFL++GK
Sbjct: 255 YNAIIRGMCKEGMVERAAELITSLTSKG---CEPDVISYNILLRAFLNQGKWDEGEKLVA 311
Query: 227 --------NTYINHVYMETIRCLF----------KQMVNDGIEPDIFSLNSMIKGYILSN 268
+ + + + C F K M+ + PD +S + +I
Sbjct: 312 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 371
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ A+ I M + LP+ +Y+ ++ LC G A E+ ++++ G P+ SY
Sbjct: 372 RLDLAIGIMDYM-ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 430
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
N+++SAL G+ + + MI K D ITY +++ +CR G EA+ LL +++
Sbjct: 431 NTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDME 489
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 112/287 (39%), Gaps = 46/287 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y+ + + V+N+M A F YN +I RKL A+ V
Sbjct: 146 DVFAYNAVISGFCKVNQIEAATQVLNRMKAR-GFLPDIVTYNIMIGSLCNRRKLGLALTV 204
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ C P++ +Y IL A + G IN L ++M+ G+ PD++
Sbjct: 205 LDQLLLDN---CMPTVITYTILIEATIVEGG---INEAMK-----LLEEMLARGLLPDMY 253
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL-------------------- 287
+ N++I+G V A + + + YN L
Sbjct: 254 TYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEM 313
Query: 288 ------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
PN +Y LI LC GR A + M K P + SY+ L+SAL G +
Sbjct: 314 FSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 373
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ + + MI D + Y T+L +C+ G A +A+++ +L+
Sbjct: 374 DLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRG 420
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 128/302 (42%), Gaps = 52/302 (17%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLSRA 192
D +Y+I+ R + E + +V +M + G E Y+ +I ++ A
Sbjct: 286 DVISYNILLRAFLNQGKWDEGEKLVAEMFSR----GCEPNKVTYSILISSLCRFGRIDEA 341
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ V K M E P SY+ L +A G+ ++ + M+++G P
Sbjct: 342 ISVLKVMIEK---ELTPDTYSYDPLISALCKEGR--------LDLAIGIMDYMISNGCLP 390
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQ---MGVV-----YNYL----------------- 287
DI + N+++ + + N AL IF++ MG YN +
Sbjct: 391 DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMV 450
Query: 288 ---------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
P+ +Y+ LI LC G + A L D+M++ GF P+ SYN ++ L
Sbjct: 451 PAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKV 510
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYT 398
+++ + EMIEK + TY +++ I G EAM+L L ++++I ++
Sbjct: 511 RRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFK 570
Query: 399 KL 400
+L
Sbjct: 571 RL 572
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 84/159 (52%), Gaps = 5/159 (3%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLCAQ 303
+VN G PD+ +IKG+ ++ A R+ M ++ ++ P+ F+Y+ +I G C
Sbjct: 104 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRV---MEILESHTEPDVFAYNAVISGFCKV 160
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
+ + A ++ + MK +GF+P +YN ++ +L ++ + L +++ ITY
Sbjct: 161 NQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITY 220
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+++ G EAMKLL+E+ + L+ D YTY ++
Sbjct: 221 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 259
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 140/314 (44%), Gaps = 34/314 (10%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA+K+ + HD STY + R L + Y EM ++ +M+ P T +
Sbjct: 105 VKMQFFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSE 164
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME-- 236
++ A+ +S+A+ +F +K + C+P+ ++YN + + G+ ++ +Y E
Sbjct: 165 VVRMLGNAKMVSKAIAIFYQIKTRK---CQPTAQAYNSMIIMLMHEGQYGKVHELYNEMS 221
Query: 237 --------------------------TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ L +M +G++P +I + + V
Sbjct: 222 TEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDV 281
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ AL +F +M Y P+ F+Y LI GL GR A EM+R+G P + N+
Sbjct: 282 HGALSLFEEMRHQYCR-PDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNN 340
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR-RGRAGEAMKLLKELQNK 389
+++ L G +++ +K EM + +TY T++ + + RA E + ++
Sbjct: 341 MINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 400
Query: 390 NL-IDGYTYTKLLD 402
+ +TY+ L+D
Sbjct: 401 GISPSSFTYSILID 414
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 48/307 (15%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R D TY + R LG A E +M T + N +I F +A +L A+
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDT-VVMNNMINFLGKAGRLDDAM 355
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTA-FLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F+ M L C PS+ +YN + A F S+ + + + F++M GI P
Sbjct: 356 KLFQEMGT---LRCIPSVVTYNTIIKALFESKSRAS--------EVPSWFERMKESGISP 404
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS------------ 292
F+ + +I G+ +N + A+ + +M Y L ++
Sbjct: 405 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464
Query: 293 --------------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y +I L GR +A + DEM + G P +YN+L+S LA
Sbjct: 465 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 524
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTY 397
G ++E + + M E D +Y +L+ + + G AM++L ++ + D +Y
Sbjct: 525 GMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSY 584
Query: 398 TKLLDVL 404
+L L
Sbjct: 585 NTVLGAL 591
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 115/292 (39%), Gaps = 55/292 (18%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K++QEM + PS YNTII E++ SRA V + + +
Sbjct: 354 AMKLFQEM----GTLRCIPSV----VTYNTIIKALFESK--SRASEVPSWFERMKESGIS 403
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP---------------- 252
PS +Y+IL F + ME L ++M G P
Sbjct: 404 PSSFTYSILIDGFCKTNR--------MEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 455
Query: 253 ------DIFS-------------LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
++F MIK + ++DA+ +F +M + P+ ++Y
Sbjct: 456 RYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKL-GCAPDVYAY 514
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L+ GL G A M+ G +P SYN +++ LA G ++ L M +
Sbjct: 515 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 574
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D ++Y TVL + G EA KL++E+ D TY+ +L+ +
Sbjct: 575 STVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAI 626
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 20/294 (6%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLEL--FNWASKQPRFRHDASTYHIMTRKLGAAKM 152
++E P +EL V L+++ V L L F + F+H T+ +M RKL
Sbjct: 32 LTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQ 91
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
+ ++ QM C +E L+ ++I + + RAV +F +K C PS++
Sbjct: 92 VDSVQYLLQQMKLQGFHC-SEDLFISVISVYRQVGLAERAVEMFYRIK---EFGCDPSVK 147
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
YN + L + I +YM +++ M DG EP++F+ N ++K +N V+
Sbjct: 148 IYNHVLDTLLGENR---IQMIYM-----VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDG 199
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A ++ +M P++ SY +I +C G K REL + F P YN+L+
Sbjct: 200 AKKLLVEMS-NKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALI 253
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ L + + + + EM+EK + I+Y T+++ +C G+ A L ++
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 40/291 (13%)
Query: 129 KQPRFRHDASTYHIMTRKL-------GAAKMYQEMD------DVVNQMLATPSFC----- 170
K+ F + TY+++ + L GA K+ EM D V+ S C
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 171 --GTE---------ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
G E ++YN +I + A F+ M+ P++ SY+ L
Sbjct: 233 KEGRELAERFEPVVSVYNALINGLCKEHDYKGA---FELMREMVEKGISPNVISYSTLIN 289
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
+ G+ +E QM+ G P+I++L+S++KG L DAL +++Q
Sbjct: 290 VLCNSGQ--------IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQ 341
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
M + PN +Y+ L+ G C+ G A + M+ G P+ ++Y SL++ A G
Sbjct: 342 MIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
++ V +M+ + + Y +++ +CR + EA L++ + +N
Sbjct: 402 SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 30/253 (11%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
D+ NQM+ YNT++ F + +AV VF +M+ + C P+IR+Y L
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE---IGCSPNIRTYGSL 393
Query: 218 FTAFLSRGK---NTYINH------------VYMETIRCL-----FKQ-------MVNDGI 250
F RG YI + VY + L FK+ M +
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P + + N+ IKG + ++ A ++F QM + PN +Y+ L+ GL R + A
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
L E+ +G SS +YN+L+ G ++ + +M+ + D IT ++
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 371 CRRGRAGEAMKLL 383
C++G+A A ++L
Sbjct: 574 CKQGKAERAAQML 586
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
R +P++ +YN L F S G N V ++ F M G P+I + S+I
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHG-----NIVKAVSV---FSHMEEIGCSPNIRTYGSLIN 395
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
G+ ++ A+ I+++M + PN Y ++ LC + K A L + M ++
Sbjct: 396 GFAKRGSLDGAVYIWNKM-LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMK 381
PS ++N+ + L G ++ K +M ++ R P + +TY +LD + + R EA
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 382 LLKEL 386
L +E+
Sbjct: 515 LTREI 519
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI- 250
A++ FK + NS + P ++ ++ G+ +++++ L +QM G
Sbjct: 59 ALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQ--------VDSVQYLLQQMKLQGFH 108
Query: 251 -EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
D+F S+I Y A+ +F+++ + P+ Y++++ L + R +
Sbjct: 109 CSEDLFI--SVISVYRQVGLAERAVEMFYRIKE-FGCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+ +MKR GF P+ +YN L+ AL N +V+ K L EM K D ++Y TV+
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 370 ICRRGRAGEAMKLLKELQ 387
+C G E +L + +
Sbjct: 226 MCEVGLVKEGRELAERFE 243
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 135/288 (46%), Gaps = 30/288 (10%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATP------------SFCGTEALYNTII 180
FRH T+H+ + ++ ++ + ++++ P F T YN ++
Sbjct: 115 FRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVL 174
Query: 181 YFF-----AEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ R A VF+ M RN P++ +YN++ +S+G +
Sbjct: 175 DALLRRSSSNHRDYDDAERVFRDM--VRN-GVSPNVYTYNVIIRGVVSQGD--------L 223
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E ++M +GI P++ + N++I V +A+ + M V N SY+
Sbjct: 224 EKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAV-GGVAANLISYNS 282
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+GLC +GR EL +EM+ KG VP +YN+LV+ G + + + L EM+ K
Sbjct: 283 VINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKG 342
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ +TY T+++ +C+ G A+++ +++ + L + TYT L+D
Sbjct: 343 LSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLID 390
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I ++S V + ++ R P +YN L F G +
Sbjct: 280 YNSVINGLCGKGRMSE---VGELVEEMRGKGLVPDEVTYNTLVNGFCKEGN--------L 328
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +MV G+ P++ + ++I + +++ A+ IF QM V PN +Y
Sbjct: 329 HQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRV-RGLRPNERTYTT 387
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G A ++ EM GF PS +YN+LV G V+E V L M+E+
Sbjct: 388 LIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERG 447
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
P D ++Y TV+ CR G+A ++ +E+ K ++ D TY+ L+ L
Sbjct: 448 LPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGL 497
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 32/255 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I +A LSRAV +F M+ R L RP+ R+Y L F +G V
Sbjct: 350 YTTLINCMCKAGNLSRAVEIFDQMR-VRGL--RPNERTYTTLIDGFCQKGLMNEAYKVLS 406
Query: 236 ETIRCLF---------------------------KQMVNDGIEPDIFSLNSMIKGYILSN 268
E I F + MV G+ PD+ S +++I G+
Sbjct: 407 EMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRER 466
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A ++ +M V LP++ +Y LI GLC Q + A +L EM R+G P +Y
Sbjct: 467 ELGKAFQMKEEM-VEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTY 525
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-Q 387
SL++A ++GE+ + ++ EM+++ D +TY +++ + ++ R A +LL +L
Sbjct: 526 TSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFY 585
Query: 388 NKNLIDGYTYTKLLD 402
+++ D TY L++
Sbjct: 586 EESVPDDVTYNTLIE 600
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 115/274 (41%), Gaps = 19/274 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + + L + E D+ +M+ E Y ++I + +LS+A+ +
Sbjct: 486 DTVTYSSLIQGLCLQQKLVEAFDLFREMMRR-GLPPDEVTYTSLINAYCVDGELSKALRL 544
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M L P +Y++L + + + + + +++ V D + +
Sbjct: 545 HDEMVQRGFL---PDNVTYSVLINGLNKKARTKVAKRLLL---KLFYEESVPDDVTYNTL 598
Query: 256 ----------SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
S+ ++KG+ + +N+A R+F M + N+ PN+ Y+ +IHG G
Sbjct: 599 IENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTM-LQRNHKPNAAIYNLMIHGHSRGGN 657
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A L E++ F + + +LV ALA G +E + L ++ R D +
Sbjct: 658 VHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKV 717
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYT 398
+++ + G + +L E+ L+ DG ++
Sbjct: 718 LVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHS 751
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 93/261 (35%), Gaps = 62/261 (23%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I F R+L +A + + M L P +Y+ L + K +
Sbjct: 455 YSTVIAGFCRERELGKAFQMKEEMVEKGVL---PDTVTYSSLIQGLCLQQK-------LV 504
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF++M+ G+ PD + S+I Y + ++ ALR+ +M V +LP++ +Y
Sbjct: 505 EAFD-LFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEM-VQRGFLPDNVTYSV 562
Query: 296 LIHG--------------------------------------------------LCAQGR 305
LI+G C +G
Sbjct: 563 LINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGL 622
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A + M ++ P++ YN ++ + G V + E+ +
Sbjct: 623 MNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIA 682
Query: 366 VLDEICRRGRAGEAMKLLKEL 386
++ + R G E +LL+ +
Sbjct: 683 LVKALAREGMNDELSRLLQNI 703
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 17/228 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K +LEC S+ +NIL +F G+ +
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGE--------I 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + G+ P + S N+++ GYI +N+ R+ + M P+ ++Y
Sbjct: 153 RLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS-GVQPDVYTYSV 211
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM G VP+S S+ +L+ +G V+ ++ +M+ +
Sbjct: 212 LINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQS 271
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY T++ +C+ G +A L+ E+ K L D TYT L+D
Sbjct: 272 LSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLID 319
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 120/246 (48%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L+ + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVS----FNTLMNGYIKLGDLNEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K N LF +M+++G+ P+ S ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESKLDDANE--------LFDEMLDNGLVPNSVSFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V+ A+ I+ QM + + P+ +Y+ LI+GLC G K A++L +EM KG P
Sbjct: 253 KDGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLSQ-SLSPDLITYNTLIYGLCKNGDLKQAQDLINEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGSCKEGD--------LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G+VPS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPS 415
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 153/361 (42%), Gaps = 64/361 (17%)
Query: 96 SELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE 155
+ L F +L + + Q D L L +WASKQP FR ++S Y + RKLG +
Sbjct: 46 ATLSSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNS 105
Query: 156 MDDVVNQM-----------------------LATPSFCGTEA------------LYNTII 180
M D++ +M L C E LYN ++
Sbjct: 106 MKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLL 165
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ KL V M + +P + ++NIL A L + + ME
Sbjct: 166 NVLVDGNKLKLVENVHSTMVSKG---IKPDVSTFNILIKA-LCKAHQIRPAILVME---- 217
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+M + G+ PD + ++++G+I +++ A R+ QM + + + + L+HG
Sbjct: 218 ---EMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQM-LDAGCPVTNVTVNVLVHGF 273
Query: 301 CAQGRTKNAR----------------ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
C +GR + A EL +EMK KG P +YN L+ +L G+++E
Sbjct: 274 CKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEA 333
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
+ L EM + ITY T++D C+ + EA ++ +++ + L + TY L+D
Sbjct: 334 LGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDG 393
Query: 404 L 404
L
Sbjct: 394 L 394
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 103/205 (50%), Gaps = 12/205 (5%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K + A+ ++ MKN C+P +YN+L + RGK ++ L ++M
Sbjct: 294 KHTMAIELYNEMKNKG---CQPDEFTYNMLIDSLCYRGK--------LQEALGLLREMEI 342
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G ++ + N++I G+ + + +A IF QM + NS +Y+ LI GLC R +
Sbjct: 343 SGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEI-QGLSRNSVTYNTLIDGLCKSRRVQ 401
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A +L D+M +G P +YNS+++ G++++ + M D +TY T++
Sbjct: 402 EAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLI 461
Query: 368 DEICRRGRAGEAMKLLKELQNKNLI 392
+C+ GR A +LL+ +Q K ++
Sbjct: 462 GGLCKAGRVEVASRLLRSIQLKGMV 486
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 125/283 (44%), Gaps = 23/283 (8%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YN 177
+ +EL+N K + D TY+++ L QE ++ +M S C + YN
Sbjct: 297 MAIELYNEM-KNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREM--EISGCARNVITYN 353
Query: 178 TIIYFFAEARKLSRAVYVFKYMKN---SRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
T+I F + +K+ A +F M+ SRN S+ +YN L +
Sbjct: 354 TLIDGFCKNKKIEEAEEIFDQMEIQGLSRN-----SV-TYNTLIDGLCKSRR-------- 399
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++ L QM+ +G++PD F+ NSM+ + + A I M P+ +Y
Sbjct: 400 VQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTM-TSNGCEPDIVTYG 458
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GLC GR + A L ++ KG V + +YN ++ AL +E ++ EM EK
Sbjct: 459 TLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEK 518
Query: 355 QRPVDFITYRTVLDEICRRGRA-GEAMKLLKELQNKNLIDGYT 396
D TY+ V + G GEA+ + E+ K + ++
Sbjct: 519 GNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFS 561
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 102/232 (43%), Gaps = 16/232 (6%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
E+F+ Q R ++ TY+ + L ++ QE +++QM+ + YN+++
Sbjct: 370 EIFDQMEIQGLSR-NSVTYNTLIDGLCKSRRVQEAAQLMDQMIME-GLKPDKFTYNSMLT 427
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+F + +A + + M ++ C P I +Y L G+ +E L
Sbjct: 428 YFCREGDIQKAADIVQTMTSNG---CEPDIVTYGTLIGGLCKAGR--------VEVASRL 476
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+ + G+ + N +I+ +A+R+F +M N P++F+Y + GL
Sbjct: 477 LRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNT-PDAFTYKIVFRGLS 535
Query: 302 -AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ G A + EM KGF+P S+ L L + +E+T+ L +++
Sbjct: 536 NSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC-SLSMEDTLIKLVDLV 586
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G + Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KGGEIXLAQSVFDSITKWGLRPSVVS----FNTLMNGYIKIGDLDEGFRLKSVMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANALFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYRQM-LSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H C G A+ + D + + G PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G+++E + M D TY +++ +C+ + +A L E+ + L+ +G
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 128/269 (47%), Gaps = 14/269 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L FNWA+ +P F H Y+ M G + + V++ M A E ++ +I
Sbjct: 126 LSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIET-FSILI 184
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ A S AV+ F M++ C+P +++IL + L R + + ++++
Sbjct: 185 RRYVRAGLASEAVHAFNRMED---YNCKPDKIAFSILIS-ILCRKRRATEAQSFFDSLK- 239
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
D EPD+ ++++G+ + ++ +A R+F +M V +PN ++Y +I L
Sbjct: 240 -------DKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVA-GCMPNVYTYTIVIDAL 291
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G+ A ++ EM G P+S ++N+L+ G E+ ++ +M P D
Sbjct: 292 CRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDT 351
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+TY +++ C+ G EA+K+L + K
Sbjct: 352 VTYNFLIESHCKDGNLDEALKVLNSMVKK 380
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+Y ++ + A + A VF MK + C P++ +Y I+ A G+ T + V
Sbjct: 248 VYTNLVRGWCRAGNIPEAERVFTEMKVA---GCMPNVYTYTIVIDALCRCGQITRAHDV- 303
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
F +M++ G EP+ + N++++ ++ + L++++QM + P++ +Y+
Sbjct: 304 -------FAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRM-GCPPDTVTYN 355
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+LI C G A ++ + M +KG P++ ++N L ++A +V + +M E
Sbjct: 356 FLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKEL 415
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ + +TY ++ +KL KE+ ++
Sbjct: 416 KCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDV 452
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 18/189 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY+ + E V+N M+ +P+ L+ +I A+ R ++ A
Sbjct: 350 DTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSI----AKLRDVNGA 405
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
++ MK L+C+ + +YNIL F+ K+T + + L K+M D +EP
Sbjct: 406 HRLYAKMKE---LKCKANTVTYNILMRMFVD-TKST-------DMVLKLKKEMDEDDVEP 454
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + +I Y H N+A + F +M P+ Y+ ++ L G+ K EL
Sbjct: 455 NVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEEL 514
Query: 313 CDEMKRKGF 321
M +GF
Sbjct: 515 VAVMVDRGF 523
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 142/315 (45%), Gaps = 36/315 (11%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA+K+ ++HD STY + L + Y EM ++ +M+ +P T +
Sbjct: 105 VKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQ 164
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME-- 236
+I A+ + +A+ +F +K + C+P+ ++YN + + G+ ++ +Y E
Sbjct: 165 VIRMLGNAKMIGKAITIFYQIKARK---CQPTAQAYNSMIIMLIHEGQYEKVHELYNEMS 221
Query: 237 ---------------------------TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
IR L +M +G++P +I + ++
Sbjct: 222 NEGHCQPDTVTYSALISAFCKLGRQDSAIR-LLNEMKENGMQPTAKIYTMIISLFFKLDN 280
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
V+ AL +F +M +Y P+ F+Y LI GL GR A EM+R+G P + N
Sbjct: 281 VHGALSLFEEMRYMYCR-PDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMN 339
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR-RGRAGEAMKLLKELQN 388
++++ L G +++ +K EM + +TY T++ + + R E + ++
Sbjct: 340 NMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKG 399
Query: 389 KNLIDG-YTYTKLLD 402
+ +TY+ L+D
Sbjct: 400 SGISPSPFTYSILID 414
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 46/306 (15%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R D TY + R LG A E ++M T + N +I F +A +L +
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDT-VVMNNMINFLGKAGRLDDGL 355
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F+ M S C P++ +YN + A + ++ V+ F++M GI P
Sbjct: 356 KLFEEMGVSH---CIPNVVTYNTIIKALFE--SKSRVSEVF-----SWFERMKGSGISPS 405
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS------------- 292
F+ + +I G+ +N + A+ + +M Y L ++
Sbjct: 406 PFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ 465
Query: 293 -------------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
Y +I L GR +A L DEM + G P+ +YN+L+S LA
Sbjct: 466 ELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARAC 525
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYT 398
++E + + +M E D +Y +L+ + + G AM++L ++N + D +Y
Sbjct: 526 MLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYN 585
Query: 399 KLLDVL 404
+L L
Sbjct: 586 TVLSAL 591
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 122 ELFNWAS--KQPRFRHDASTYHIM------TRKLGAAKMY-QEMDDVVNQMLATPSFCGT 172
E+F+W K TY I+ T ++ A M +EMD+ F
Sbjct: 389 EVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE--------KGFPPC 440
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYIN 231
A Y ++I +A++ A +F+ +K + S R Y ++ G+ + IN
Sbjct: 441 PAAYCSLIDALGKAKRYDLACELFQELKENCG---SSSARVYAVMIKHLGKAGRLDDAIN 497
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
LF +M G P++++ N+++ G + +++AL +M + LP+
Sbjct: 498 ---------LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQE-HGCLPDIN 547
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
SY+ +++GL G A E+ MK P + SYN+++SAL+ G EE + + EM
Sbjct: 548 SYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM 607
Query: 352 IEKQRPVDFITYRTVLDEICR 372
D ITY ++L+ I +
Sbjct: 608 NALGFEYDLITYSSILEAIGK 628
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 47/265 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTII E++ SR VF + + + PS +Y+IL F + +
Sbjct: 373 YNTIIKALFESK--SRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNR--------I 422
Query: 236 ETIRCLFKQMVNDGIEP----------------------DIFS-------------LNSM 260
E L ++M G P ++F M
Sbjct: 423 EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVM 482
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
IK + ++DA+ +F +M + PN ++Y+ L+ GL A +M+ G
Sbjct: 483 IKHLGKAGRLDDAINLFDEMSKL-GCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHG 541
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
+P SYN +++ LA G ++ L M D ++Y TVL + G EA
Sbjct: 542 CLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAA 601
Query: 381 KLLKELQNKNL-IDGYTYTKLLDVL 404
+L+KE+ D TY+ +L+ +
Sbjct: 602 ELMKEMNALGFEYDLITYSSILEAI 626
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 15/229 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR-GKNTYINHVY 234
YN+II F + ++ A V + MKN R I N+++T +S GK+ ++ Y
Sbjct: 325 YNSIISFLCKTGRVVEAEQVLRVMKNQR-------IFPDNVVYTTLISGFGKSGNVSVEY 377
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
LF +M I PD + SMI G + V +A ++F +M + P+ +Y
Sbjct: 378 K-----LFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM-LSKGLKPDEVTYT 431
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI G C G K A L ++M KG P+ +Y +LV L GEV+ + L EM EK
Sbjct: 432 ALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK 491
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ TY +++ +C+ G +A+KL++E+ D TYT ++D
Sbjct: 492 GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMD 540
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ I+ + + +L + V K M+ + +P+ +YN + + G+ V
Sbjct: 290 YSVIVDGYCQVEQLGK---VLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV-- 344
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ M N I PD ++I G+ S +V+ ++F +M +P+ +Y
Sbjct: 345 ------LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKR-KKIVPDFVTYTS 397
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+IHGLC G+ AR+L EM KG P +Y +L+ GE++E +M+EK
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ +TY ++D +C+ G A +LL E+ K L
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGL 493
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I+ +A K+ A +F M S+ L +P +Y L + G+ M
Sbjct: 395 YTSMIHGLCQAGKVVEARKLFSEML-SKGL--KPDEVTYTALIDGYCKAGE--------M 443
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L QMV G+ P++ + +++ G V+ A + H+M PN +Y+
Sbjct: 444 KEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE-KGLQPNVCTYNA 502
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC G + A +L +EM GF P + +Y +++ A GE+ + + L M++K
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
+T+ +++ C G + +L+K + +K ++ T
Sbjct: 563 LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNAT 603
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 30/223 (13%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+ +EMD F Y TI+ + + ++++A + + M + +
Sbjct: 516 AVKLMEEMD--------LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG---LQ 564
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+I ++N+L F G +E L K M++ GI P+ + NS++K Y + N
Sbjct: 565 PTIVTFNVLMNGFCMSG--------MLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRN 616
Query: 269 HVNDALRIF---HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
++ + I+ H GVV P++ +Y+ LI G C K A L EM KGF ++
Sbjct: 617 NMRATIEIYKGMHAQGVV----PDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTA 672
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
SYNSL+ + EE K + E+ R FI + + D
Sbjct: 673 ASYNSLIKGFYKRKKFEEARK----LFEEMRTHGFIAEKEIYD 711
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 167/392 (42%), Gaps = 69/392 (17%)
Query: 46 NPHLKLSSNAILCSCYSAIALSRSSSRGVGKRSKADSKPALDDTQF-------------- 91
NP L L +S +L S++R S KP++ DT F
Sbjct: 22 NPFLGFGPRRCLSVKFST-SLGSSNARPFPDYSP--RKPSVTDTDFVHHISTTIKQRRAE 78
Query: 92 --RCAVSELPPRFNNEELCNV-MTLQEDPLVCLELFNWASKQPRFRHDAS--TYHIMTRK 146
R + +F + L V M++++D + L+ F+WA R R D S + I+ +
Sbjct: 79 PFRRILKPFESKFRPDHLIWVLMSIRDDYKLVLDFFDWA----RLRRDPSLESLCIVVQI 134
Query: 147 LGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
A+K + +V + P + R R +Y +K +
Sbjct: 135 AVASKDLRMAHRLVFEFWEKPHLDVGNSF----------DRFTERLIYTYK------DWG 178
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
P + +++ F + G + +E + LF +++N G+ + S N + L
Sbjct: 179 AHPLV--FDVFFQVLVEAG-------LLLEAGK-LFDKLLNYGVLVSVDSCNLFLAR--L 226
Query: 267 SNH---VNDALRIFHQ---MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
SN + A R+F + +GV +N + SY+ ++H LC G+ K A L +M+ +G
Sbjct: 227 SNSFDGIRTAFRVFREYSEVGVCWN----TVSYNIILHLLCQLGKVKEAHSLLIQMEFRG 282
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
VP SY+ +V ++ + +K + E+ K + TY +++ +C+ GR EA
Sbjct: 283 NVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAE 342
Query: 381 KLLKELQNKNLI-DGYTYTKLLDVLEDDFGNS 411
++L+ ++N+ + D YT L+ FG S
Sbjct: 343 QVLRVMKNQRIFPDNVVYTTLI----SGFGKS 370
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P +YNIL + +N M+ L K+MV G S NS+IKG+
Sbjct: 635 PDTNTYNILIKGH-CKARN-------MKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRK 686
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+A ++F +M + ++ YD + +G +N ELCDE K V +
Sbjct: 687 KFEEARKLFEEMRT-HGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLVKKT 742
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 32/256 (12%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------- 226
+N +++ F + R + A VF + RPS+ SYN L ++ G
Sbjct: 126 FFNILMHRFCKERDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 182
Query: 227 -------------------NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
N M+ LF +M+ G+ P+ + ++I G+ +
Sbjct: 183 SAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 242
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ AL I+ QM + + LP+ +Y+ LI+GLC +G K A +L DEM KG P +
Sbjct: 243 GRVDLALEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 301
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E+
Sbjct: 302 YTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 361
Query: 388 NKNL-IDGYTYTKLLD 402
+ L D TYT +++
Sbjct: 362 SVGLKPDARTYTMIIN 377
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
Y + + ++ L+H C + + A+ + D + + G PS SYN+L++ G+++E
Sbjct: 119 GYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 178
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ M D TY +++ +C+ + +A +L E+ K L+ +G T+T L+D
Sbjct: 179 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLID 237
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + ++ A V MK L P I +YNI+ + +R K V
Sbjct: 140 YNAVISGFCKVNRIEAATQVLNRMKARGFL---PDIVTYNIMIGSLCNRRKLGLALKV-- 194
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
Q++ D P + + +I+ I+ +N+A+++ +M + LP+ ++Y+
Sbjct: 195 ------LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM-LARGLLPDMYTYNA 247
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C +G + A EL + KG P SYN L+ A G+ +E K + EM +
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ +TY ++ +CR GR EA+ +LK + K L D Y+Y L+ L
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 357
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 31/239 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YN II + + RA + + + C+P + SYNIL AFL++GK
Sbjct: 245 YNAIIRGMCKEGMVERAAELITSLTSKG---CKPDVISYNILLRAFLNQGKWDEGEKLVA 301
Query: 227 --------NTYINHVYMETIRCLF----------KQMVNDGIEPDIFSLNSMIKGYILSN 268
+ + + + C F K M+ + PD +S + +I
Sbjct: 302 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 361
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ A+ I M + LP+ +Y+ ++ LC G A E+ ++++ G P+ SY
Sbjct: 362 RLDLAIGIMDYM-ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 420
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
N+++SAL G+ + + MI K D ITY +++ +CR G EA+ LL +++
Sbjct: 421 NTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDME 479
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 112/287 (39%), Gaps = 46/287 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y+ + + V+N+M A F YN +I RKL A+ V
Sbjct: 136 DVFAYNAVISGFCKVNRIEAATQVLNRMKAR-GFLPDIVTYNIMIGSLCNRRKLGLALKV 194
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ C P++ +Y IL A + G IN L ++M+ G+ PD++
Sbjct: 195 LDQLLLDN---CMPTVITYTILIEATIVEGG---INEAMK-----LLEEMLARGLLPDMY 243
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL-------------------- 287
+ N++I+G V A + + + YN L
Sbjct: 244 TYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEM 303
Query: 288 ------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
PN +Y LI LC GR A + M K P + SY+ L+SAL G +
Sbjct: 304 FSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 363
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ + + MI D + Y T+L +C+ G A +A+++ +L+
Sbjct: 364 DLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRG 410
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 129/304 (42%), Gaps = 52/304 (17%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLS 190
+ D +Y+I+ R + E + +V +M + G E Y+ +I ++
Sbjct: 274 KPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR----GCEPNKVTYSILISSLCRFGRID 329
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A+ V K M E P SY+ L +A G+ ++ + M+++G
Sbjct: 330 EAISVLKVMIEK---ELTPDTYSYDPLISALCKEGR--------LDLAIGIMDYMISNGC 378
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQ---MGVV-----YNYL--------------- 287
PDI + N+++ + + N AL IF++ MG YN +
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 438
Query: 288 -----------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
P+ +Y+ LI LC G + A L D+M++ GF P+ SYN ++ L
Sbjct: 439 MVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 498
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
+++ + EMIEK + TY +++ I G EAM+L L ++++I +
Sbjct: 499 KVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDS 558
Query: 397 YTKL 400
+ +L
Sbjct: 559 FKRL 562
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLCAQ 303
+VN G PD+ +IKG+ ++ A R+ M ++ ++ P+ F+Y+ +I G C
Sbjct: 94 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRV---MEILESHTEPDVFAYNAVISGFCKV 150
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
R + A ++ + MK +GF+P +YN ++ +L ++ +K L +++ ITY
Sbjct: 151 NRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITY 210
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+++ G EAMKLL+E+ + L+ D YTY ++
Sbjct: 211 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 249
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 130/264 (49%), Gaps = 14/264 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + M+ + +++QM A F YN IIY + KL A+ + +
Sbjct: 388 TYSTLLHSFCRNGMWDDARAMLDQMSAK-GFSMNSQGYNGIIYALGKDGKLDEAMRLVQE 446
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
MK+ C+P I +YN + N+ M+ +F ++ +G+ + + N
Sbjct: 447 MKSQ---GCKPDICTYNTIIYHL--------CNNDQMDEAEHIFGNLLEEGVVANGITYN 495
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I + S + LR+ ++M V++ + SY+ LI LC +G + L +EM
Sbjct: 496 TLIHALLHSGRWQEGLRLANEM-VLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMT 554
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG P++ SYN L++ L G+V + ++ EM+ + D +TY T+++ +C+ G
Sbjct: 555 KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHA 614
Query: 379 AMKLLKELQNKNL-IDGYTYTKLL 401
A+ LL++L N+N+ D TY L+
Sbjct: 615 ALNLLEKLPNENVHPDIVTYNILI 638
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 122/293 (41%), Gaps = 29/293 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA Y + L A E ++++ML + ++ A V
Sbjct: 214 DAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLV 273
Query: 196 FKYMKNSRNLECRPSIRSYNILF----------TAFLSRGKNTYINHVYMETI--RCL-- 241
+ M + C PS+ +Y L A+ G+ +N V + T+ CL
Sbjct: 274 DRMMMHG----CTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAE 329
Query: 242 ---------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
++ M + G PD+ + N ++ G A+R+ +M PN +
Sbjct: 330 GKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEM-EEKGCAPNIVT 388
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y L+H C G +AR + D+M KGF +S+ YN ++ AL +G+++E ++ + EM
Sbjct: 389 YSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMK 448
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ D TY T++ +C + EA + L + ++ +G TY L+ L
Sbjct: 449 SQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHAL 501
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 15/277 (5%)
Query: 117 PLVCLELFNW-ASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL 175
P L L +W AS P + + +GAA + D + + + P L
Sbjct: 55 PATSLLLLDWYASSHPALSLSSLPLRPILASVGAAG---DPDRALALLDSLPRSSRLPPL 111
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+++ + RA+++ M R PS RSYN + + L+R + + + +
Sbjct: 112 RESLLLPLLRSLPPGRALHLLDQMP--RRFAVTPSFRSYNAVLST-LARA-DCHADALL- 166
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L+++M+ D + P F+ + DAL + M + +P++ Y
Sbjct: 167 -----LYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGM-ARHGCVPDAVLYQT 220
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+IH L AQG A L DEM G ++N +V L G V E + + M+
Sbjct: 221 VIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHG 280
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+TY +L +CR +A EA +L + N++
Sbjct: 281 CTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVV 317
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 116/235 (49%), Gaps = 16/235 (6%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
+ A + T+I K+ A+ +F M +P + +Y L + T
Sbjct: 79 STATFTTLIRGLCVEGKIGEALQLFDKMTGE---GFQPDVLTYGTLINGLCKDRQLT--- 132
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
E + LF M+ GI P+ F+ +S+I G + H +A+R+F+ M + +P+
Sbjct: 133 ----EALS-LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAM-IHRKIMPDQL 186
Query: 292 SYDYLIHGLCAQGRTK---NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+++ L+ LC +G + A L +EM ++G +P + +YN+L+ L G + + +
Sbjct: 187 TFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 246
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
EM+ + D +TYR + D +C+ R EAM LLK ++ NL D + Y+ ++D
Sbjct: 247 HEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMD 301
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 85/157 (54%), Gaps = 5/157 (3%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G +P + ++I+G + + +AL++F +M + P+ +Y LI+GLC +
Sbjct: 75 GYQPSTATFTTLIRGLCVEGKIGEALQLFDKM-TGEGFQPDVLTYGTLINGLCKDRQLTE 133
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L +M KG P++ +Y+SL+ L + G +E ++ + MI ++ D +T+ T++D
Sbjct: 134 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 193
Query: 369 EICRRGR---AGEAMKLLKELQNKNLI-DGYTYTKLL 401
+C+ G +AM L +E+ + LI D TY L+
Sbjct: 194 ALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLI 230
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 103/197 (52%), Gaps = 10/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PSI ++ L T+ ++R K + T+ L+KQM + GI + ++LN +I + N
Sbjct: 8 PSIVDFSKLLTS-ITRMK-------HYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLN 59
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A + + + Y P++ ++ LI GLC +G+ A +L D+M +GF P +Y
Sbjct: 60 RLGFAFSVLGDI-LKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTY 118
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L++ L + ++ E + +M+ K + TY +++ +C G EA++L + +
Sbjct: 119 GTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIH 178
Query: 389 KNLI-DGYTYTKLLDVL 404
+ ++ D T+ L+D L
Sbjct: 179 RKIMPDQLTFNTLVDAL 195
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 12/276 (4%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L+LF+ + + F+ D TY + L + E + + MLA Y+++I
Sbjct: 100 LQLFDKMTGE-GFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAK-GISPNNFTYSSLI 157
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ A+ +F M + + + P ++N L A G M+
Sbjct: 158 HGLCILGHWKEAIRLFYAMIHRKIM---PDQLTFNTLVDALCKEGMIQI-----MDKAMG 209
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF++M G+ PD + N++I G + DA+ +FH+M VVY +P+ +Y L L
Sbjct: 210 LFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM-VVYGQIPDLVTYRILFDYL 268
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C R A L ++ P Y+ ++ + GE+E ++ K D
Sbjct: 269 CKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDV 328
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
TY +++ +C++G EA KL E+ ++N I+ Y+
Sbjct: 329 RTYTIMINGLCQQGLLAEASKLFGEM-DENDIESYS 363
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 143/321 (44%), Gaps = 44/321 (13%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
EDP L LF+ ++ FRHD +Y + KL ++ + +D ++ + C E+
Sbjct: 60 EDPEEALSLFH-QYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRC-RES 117
Query: 175 LYNTIIYFFAEARKLSRAVYVF--------------------------------KYMKNS 202
L+ +I + +A + +AV VF + +
Sbjct: 118 LFMALIQHYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGA 177
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
+++ RP+ S+NIL FL + E +F +M+ ++P + + NS+I
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCD--------WEAACKVFDEMLEMEVQPSVVTYNSLIG 229
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
+N + A + M + PN+ ++ L+ GLC G A++L +M+ +G
Sbjct: 230 FLCRNNDMGKATSLLEDM-IKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCK 288
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P +Y L+S L G+++E L EM +++ DF+ Y +++ +C GR EA +
Sbjct: 289 PGLVNYGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRT 348
Query: 383 LKELQNKNL-IDGYTYTKLLD 402
L E+Q K + TY ++D
Sbjct: 349 LTEMQMKGCKPNAATYRMIVD 369
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/284 (18%), Positives = 108/284 (38%), Gaps = 56/284 (19%)
Query: 127 ASKQPRFRHDASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTI 179
+K R R ++ +++I+ + A K++ EM +M PS YN++
Sbjct: 176 GAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM----LEMEVQPSV----VTYNSL 227
Query: 180 IYFFAEARKLSRAVYVFKYMKNSR-----------------------------NLE---C 207
I F + +A + + M R ++E C
Sbjct: 228 IGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGC 287
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + +Y +L + RGK ++ + L +M I+PD N ++
Sbjct: 288 KPGLVNYGVLMSDLGKRGK--------IDEAKILLGEMKKRRIKPDFVIYNILVNHLCTE 339
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V +A R +M + PN+ +Y ++ G C G + + + M P+ +
Sbjct: 340 GRVPEAYRTLTEMQM-KGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPAT 398
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ +VS L G ++ L M +K+ + ++ +L ++C
Sbjct: 399 FVRMVSGLIKGGNLDHACFVLEVMGKKKLSFGYSAWQNLLCDLC 442
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I F + + S A + + M + P + +YN L AF+ GK +
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGK-------FF 342
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+ +M+ GI P+ + NSMI G+ + ++ A +F+ M P+ F++
Sbjct: 343 EAAE-LYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT-KGCSPDVFTFTT 400
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C R + EL EM R+G V ++ +YN+L+ L G++ + +MI
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 460
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D +T T+LD +C G+ +A+++ K +Q +
Sbjct: 461 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 21/243 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+++ ++S A+ F M + CRP++ ++ L G+ +
Sbjct: 152 FTTLLHGLCVEDRVSEALDFFHQMFETT---CRPNVVTFTTLMNGLCREGR-------IV 201
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +M+ DG++P + +++ G AL + +M V + +PN Y
Sbjct: 202 EAV-ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC GR +A+ L EM+ KG P +YNS++ +G + + L EM+E++
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK----------NLIDGYTYTKLLDVLE 405
D +TY +++ + G+ EA +L E+ + ++IDG+ LD E
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 380
Query: 406 DDF 408
D F
Sbjct: 381 DMF 383
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 18/238 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSR-NLEC-------RP 209
D+ QM+++ C NT++ + KL A+ +FK M+ S+ +L+ P
Sbjct: 451 DLSQQMISS-GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 509
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+ +YNIL ++ GK ++E L+++M + GI PD + +SMI G +
Sbjct: 510 DVLTYNILICGLINEGK-------FLEAEE-LYEEMPHRGIVPDTITYSSMIDGLCKQSR 561
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+++A ++F MG ++ PN +++ LI+G C GR + EL EM R+G V + Y
Sbjct: 562 LDEATQMFVSMGS-KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYI 620
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+L+ G + + EMI D IT R +L + A+ +L++LQ
Sbjct: 621 TLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T+ Y TI+ + A+ + + M+ ++ P++ Y+ + + G+++
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI--IPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ LF +M GI PD+F+ NSMI G+ S +DA ++ +M + P+
Sbjct: 276 N--------LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM-LERKISPDVV 326
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LI+ +G+ A EL DEM +G +P++ +YNS++ ++ + M
Sbjct: 327 TYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLM 386
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
K D T+ T++D C R + M+LL E+ + L+ + TY L+
Sbjct: 387 ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 437
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL----------PNS 290
L +QM++ G+ PDI + N+++ G + + DAL +F M L P+
Sbjct: 452 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDV 511
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y+ LI GL +G+ A EL +EM +G VP + +Y+S++ L ++E +
Sbjct: 512 LTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 571
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
M K + +T+ T+++ C+ GR + ++L E+ + ++ D Y L+
Sbjct: 572 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 623
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 14/227 (6%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
F E + L A+ +F M SR L PS+ + L + + + +Y
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLMGVVVRMERPDLVISLY-------- 102
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
++M I DI+S N +IK + + + AL F ++ P+ ++ L+HGLC
Sbjct: 103 QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKI-TKLGLHPDVVTFTTLLHGLCV 161
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ R A + +M P+ ++ +L++ L G + E V L M+E IT
Sbjct: 162 EDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVLEDD 407
Y T++D +C++G A+ LL++++ + I + Y+ ++D L D
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 21/221 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I+ F L+ A+ + + M +S P I + N L GK +
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSGVC---PDIVTCNTLLDGLCDNGKL----KDAL 485
Query: 236 ETIRCLFKQMVN-------DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYN 285
E + + K ++ +G+EPD+ + N +I G I +A ++ +M G+V
Sbjct: 486 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV-- 543
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P++ +Y +I GLC Q R A ++ M K F P+ ++N+L++ G V++ +
Sbjct: 544 --PDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 601
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ EM + D I Y T++ + G A+ + +E+
Sbjct: 602 ELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 642
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 15/253 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D T++I+ L AK + +V+ + L C A+ Y ++I + +A K+ A+
Sbjct: 249 DTITHNILVDGLCRAKQVNKGHEVLRR-LQRDGVCMPNAVTYTSVISGYCKAGKMEDAMS 307
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
V+ M S RP+ +YN+L N Y + ME+ +++Q++ PD+
Sbjct: 308 VYNDMLESGT---RPNTVTYNVLI--------NGYGKALDMESAVRMYRQLILRHCPPDV 356
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ +S+I GY ++DA RI+ +MG+ ++ PN +++ +IH LC Q R+ A ++
Sbjct: 357 VTFSSLIDGYCRCGQLDDAKRIWKEMGL-HHIQPNVYTFSIIIHSLCKQNRSAEALDILR 415
Query: 315 EMK-RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
E+ R P + YN ++ L G+V+E + +M EK D TY ++ C +
Sbjct: 416 ELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMK 475
Query: 374 GRAGEAMKLLKEL 386
GR EA+ L ++
Sbjct: 476 GRIPEAITLFHKM 488
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 90/181 (49%), Gaps = 14/181 (7%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + S+N++ G + + + L ++M G PD + N ++ G +
Sbjct: 213 PDVWSFNVVIKGVCRMGN-------FQKALE-LVERMTEFGCSPDTITHNILVDGLCRAK 264
Query: 269 HVN---DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
VN + LR + GV +PN+ +Y +I G C G+ ++A + ++M G P++
Sbjct: 265 QVNKGHEVLRRLQRDGVC---MPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNT 321
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+YN L++ ++E V+ ++I + P D +T+ +++D CR G+ +A ++ KE
Sbjct: 322 VTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKE 381
Query: 386 L 386
+
Sbjct: 382 M 382
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
IEP ++ N ++ I DA+ +F Y P+ +S++ +I G+C G + A
Sbjct: 177 IEP--YAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKA 234
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP----VDFITYRT 365
EL + M G P + ++N LV L +V + + L + QR + +TY +
Sbjct: 235 LELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRL---QRDGVCMPNAVTYTS 291
Query: 366 VLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLD 402
V+ C+ G+ +AM + + L++ + TY L++
Sbjct: 292 VISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLIN 329
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 38/168 (22%)
Query: 272 DALRIFHQMGVVYNYLPNS-----------------------------------FSYDYL 296
DAL++F QM YLP + ++Y+YL
Sbjct: 126 DALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYL 185
Query: 297 IHGLCAQGRTKNARELCDEMKRKG-FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ L A GR ++A L + + G + P S+N ++ + G ++ ++ + M E
Sbjct: 186 LNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFG 245
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLL 401
D IT+ ++D +CR + + ++L+ LQ + + TYT ++
Sbjct: 246 CSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVI 293
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 144/321 (44%), Gaps = 13/321 (4%)
Query: 98 LPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD 157
+ P + + V+ Q++PL LE+FN K+ F+H TY M KLG ++ M+
Sbjct: 1 MSPALLPKHVAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAME 60
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
+V+ + E +Y + + K+ AV VF+ M C PS++SYN +
Sbjct: 61 EVLAETRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDF---FNCEPSVQSYNAI 117
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
N + + Y + ++ +M + GI PD+++ +K + ++ + A R+
Sbjct: 118 M--------NILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLL 169
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+ M ++ +Y +I G + A EL +EM G P ++N L+ L
Sbjct: 170 NNM-PSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCR 228
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTY 397
G V+E+ + L +++++ + T + C+R EA++LL + D TY
Sbjct: 229 KGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITY 288
Query: 398 TKLLDVLEDDFG-NSIRHHLR 417
L+ L +F H+LR
Sbjct: 289 NTLICGLCKNFKVVEAEHYLR 309
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 13/259 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D TY+ + M Q D ++ A F E+ Y ++I + + RA
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQILRDG-AFKGFVPDESTYCSLINGLCQDGDIDRA 374
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ VF + +P++ N L +G + ++ ++ L +M +G P
Sbjct: 375 INVFN---EAMEKGLKPNLVLCNTLVKGLSQQG-------LILQALK-LMNEMSENGCSP 423
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
DI++ N +I G V+DA + + +LP+ F+++ LI G C + + NA E+
Sbjct: 424 DIWTYNLVINGLCKIGCVSDADNLVID-AIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEI 482
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M G P +YNS+++ L G+ E+ + M+EK + ITY + + C+
Sbjct: 483 VDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCK 542
Query: 373 RGRAGEAMKLLKELQNKNL 391
+ EA+ L++E+QNK L
Sbjct: 543 ARKVEEALNLIEEMQNKGL 561
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+I+ +A K + FK M C P+I +YNIL +F K +
Sbjct: 498 YNSILNGLCKAGKYEDVMGTFKLMMEKG---CVPNIITYNILTESFCKARK--------V 546
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L ++M N G+ PD+ + +++KG+ + ++ A ++F ++ Y + +Y+
Sbjct: 547 EEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNI 606
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+ + A +L ++M GF P S +Y ++ G + L IEK
Sbjct: 607 MINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKG 666
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
T+ VL+ +C + R EA+ ++ + +K ++
Sbjct: 667 LIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIV 703
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
L NT++ ++ + +A+ K M C P I +YN++ G + +++
Sbjct: 391 VLCNTLVKGLSQQGLILQAL---KLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNL 447
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNS 290
++ I G PD+F+ N++I GY +++A+ I +M GV P+
Sbjct: 448 VIDAIA--------KGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVS----PDV 495
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y+ +++GLC G+ ++ M KG VP+ +YN L + +VEE + + E
Sbjct: 496 ITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEE 555
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
M K D + + T++ C G A +L K + +
Sbjct: 556 MQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQ 594
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 50/272 (18%)
Query: 170 CGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
C + A+ Y T+I F E A +F+ M L P I ++N L +G
Sbjct: 177 CESSAVAYCTVIGGFYEENHRVEAHELFEEM---LGLGICPDIMAFNKLIHTLCRKG--- 230
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
HV E+ R L +++ G+ P++F++N I+G+ +N+A+R+ GV P
Sbjct: 231 ---HV-QESER-LLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLD--GVGRGLTP 283
Query: 289 NSFSYDYLIHGLCAQ-----------------------------------GRTKNARELC 313
+ +Y+ LI GLC G +NA ++
Sbjct: 284 DVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQIL 343
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+ KGFVP +Y SL++ L +G+++ + E +EK + + T++ + ++
Sbjct: 344 RDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQ 403
Query: 374 GRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
G +A+KL+ E+ +N D +TY +++ L
Sbjct: 404 GLILQALKLMNEMSENGCSPDIWTYNLVINGL 435
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 129/309 (41%), Gaps = 30/309 (9%)
Query: 107 LCNVMT--LQEDPLV--CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQ 162
LCN + L + L+ L+L N S+ D TY+++ L + D++V
Sbjct: 392 LCNTLVKGLSQQGLILQALKLMNEMSENG-CSPDIWTYNLVINGLCKIGCVSDADNLVID 450
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
+A +NT+I + + KL A+ + M N P + +YN +
Sbjct: 451 AIAKGHLPDVFT-FNTLIDGYCKKLKLDNAIEIVDRMWNHG---VSPDVITYNSILNGLC 506
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-- 280
GK E + FK M+ G P+I + N + + + + V +AL + +M
Sbjct: 507 KAGK--------YEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQN 558
Query: 281 -GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK-GFVPSSKSYNSLVSALA-- 336
G+ P+ ++ L+ G C G A +L + + F + +YN +++A A
Sbjct: 559 KGLT----PDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGK 614
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY- 395
LN + E + N +M E D TYR ++D C+ G L K LI
Sbjct: 615 LNMNMAEKLFN--KMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLT 672
Query: 396 TYTKLLDVL 404
T+ ++L+ L
Sbjct: 673 TFGRVLNCL 681
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 18/189 (9%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY+I+T A+ +E +++ +M TP + T++ F + L A +
Sbjct: 532 TYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVN----FGTLMKGFCDNGDLDGAYQL 587
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
FK + +I +YNI+ AF + + M LF +M +G PD +
Sbjct: 588 FKRVDEQYKFS--HTIATYNIMINAFAGK--------LNMNMAEKLFNKMCENGFSPDSY 637
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ MI G+ + ++N F + + +P+ ++ +++ LC + R A +
Sbjct: 638 TYRVMIDGFCKTGNINSGYS-FLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHL 696
Query: 316 MKRKGFVPS 324
M KG VP
Sbjct: 697 MVHKGIVPE 705
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEAR---KLSRAVYVFKYMKNSRNLECRPSIRS 213
D +VN+ L S+ + + I + + + K SR + +L P I +
Sbjct: 246 DRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVT 305
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
+N+L F GK + E + L K M G+EP++ + +S++ GY L V +A
Sbjct: 306 FNVLVDTFCKEGKVS-------EALGVL-KTMTEMGVEPNVVTYSSLMYGYSLWTDVVEA 357
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
++FH M + PN FSY+ LI+G C R A +L +EM +G P++ SYN+L+
Sbjct: 358 RKLFHVM-ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIH 416
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
G++ E M D TY +LD C++G G+A +L + +Q+ L
Sbjct: 417 GFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYL 474
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + +A+++ A+ +F M + P+ SYN L F GK +
Sbjct: 376 YNILINGYCKAKRIDEAMQLFNEMIHQ---GLTPNNVSYNTLIHGFCQLGK--------L 424
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF+ M +G PD+F+ + ++ G+ ++ A R+F M Y PN Y
Sbjct: 425 REAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTY-LKPNLVMYTI 483
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+H +C G K+AR+L E+ +G P + Y ++++ L G ++E ++ M
Sbjct: 484 LVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADG 543
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
P D I+Y ++ + + A+ L+ E++++ I
Sbjct: 544 CPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFI 580
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
R + A+ F +M + + L C I + L +A + G+ Y + + L KQM
Sbjct: 71 RNIDDALASFNHMLHRKPLPC---IIQFAKLLSAIVKMGQ-------YYDVVISLSKQME 120
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
G+ P+I++L+ + + V+ + ++ + P ++ LI+GLC G
Sbjct: 121 LVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKV-IKLGLQPTIVTFTTLINGLCKVGEF 179
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
A EL D+M KG P +YN++++ L GE L +M E + +TY T+
Sbjct: 180 AQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTL 239
Query: 367 LDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+D +CR EA+ + ++ K + D +TYT L+ L
Sbjct: 240 IDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGL 278
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 9/199 (4%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L R F + L +P+I ++ L G+ + + + LF MV
Sbjct: 140 QLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE-------FAQAVE-LFDDMVA 191
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G +PD+++ N++I G A + +M PN +Y LI LC
Sbjct: 192 KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEA-GCQPNMVTYSTLIDSLCRDRLVN 250
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A ++ MK KG P +Y SL+ L +E L EM D +T+ ++
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLV 310
Query: 368 DEICRRGRAGEAMKLLKEL 386
D C+ G+ EA+ +LK +
Sbjct: 311 DTFCKEGKVSEALGVLKTM 329
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ +++ G++P I + ++I G A+ +F M V P+ ++Y+ +I+GL
Sbjct: 150 VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDM-VAKGCQPDVYTYNTIINGL 208
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G T A L +M+ G P+ +Y++L+ +L + V E + M K D
Sbjct: 209 CKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDI 268
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
TY +++ +C+ R EA LL E+ + N++ D T+ L+D
Sbjct: 269 FTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVD 311
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + L + + M S
Sbjct: 148 KEGEIRLSQSVFDAIRKWGLRPSVVS----FNTLMNGYIRQGDLDKGFRLKSAMHAS--- 200
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+
Sbjct: 201 GVQPDVYTYSVLINGLCKESK--------MDEANELFXEMLDKGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K AR L +EM KG P
Sbjct: 253 KNGKVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ +G++E + MIE+ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 372 MLSVGLKPDSGTYTMIIN 389
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF--------------------HQMGVVY-------- 284
DI+ + +I Y+ S + DA+ + H M + Y
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 285 ------NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C +G + ++ + D +++ G PS S+N+L++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQ 184
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G++++ + M D TY +++ +C+ + EA +L E+ +K L+ +G T+
Sbjct: 185 GDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTF 244
Query: 398 TKLLD 402
T L+D
Sbjct: 245 TTLID 249
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLS-QSLSPDLITYNTLIYGLCKKGDLKQARNLINEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGSCKDGD--------LETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P+S +Y +I+ C +G +L EM+R G VPS
Sbjct: 370 REMLSV-GLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPS 415
>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 147/354 (41%), Gaps = 63/354 (17%)
Query: 103 NNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQ 162
+E + +++ Q+ L+ F WASK P F H STY + KL + + + ++++
Sbjct: 14 THERIVHLILDQKSAPQALQTFEWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQHLLDE 73
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF----KYMKNSRNLECRPSIRSYNILF 218
M + E+++ TII AR + + V +Y KN PS++ +N +
Sbjct: 74 MPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKN-------PSLKIFNSIL 126
Query: 219 TAFLSRGKNTYINHVYMETIRCLF-KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+ ++ R + K+M+ GI+ D ++ ++KG L+N + + ++
Sbjct: 127 DVLVKED---------IDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLL 177
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK------------------ 319
Q+ PN Y+ L+H LC G+ AR L +E+K
Sbjct: 178 -QVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKEPNDVTFNVLICGYCKEDNF 236
Query: 320 -------------GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
GFVP + +V L G V E V+ L + K VD + + T+
Sbjct: 237 VQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTL 296
Query: 367 LDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVLEDDFGN 410
+ C+ G+ LLKE++ K LI G+ + +L+ D F +
Sbjct: 297 IKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFND 350
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 13/260 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+A TY+ + + M + D+ N M C I F+ R +
Sbjct: 324 NADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRT-EDGFKI 382
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M+ +R + C SI YN + Y ++ E + L K + + P
Sbjct: 383 LELMEETRGV-CGGSISPYNSVLYGL-------YRKNMLNEALEFLMKM---ENLFPRAV 431
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ I G+ + +A R++ QM +P++ YD LIHG C +G + A EL +E
Sbjct: 432 DRSLRILGFCEEGAIQEAKRVYDQMNN-EGGIPSALVYDCLIHGFCQEGCVREALELMNE 490
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G+ P + ++N+L+S G+ +K L +M+ + D +Y ++D +CR+
Sbjct: 491 MVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKS 550
Query: 376 AGEAMKLLKELQNKNLIDGY 395
+A LL ++ + Y
Sbjct: 551 FQKAASLLLQMVENGITPDY 570
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 15/230 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE-ALYNTIIYFFAEARKLSRAVYVFK 197
T+ + + L + ++ ++ M T CG + YN+++Y L+ A+ +
Sbjct: 362 TFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEAL---E 418
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
++ NL R RS IL F G VY QM N+G P
Sbjct: 419 FLMKMENLFPRAVDRSLRIL--GFCEEGAIQEAKRVY--------DQMNNEGGIPSALVY 468
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
+ +I G+ V +AL + ++M V Y P + +++ LI G C G+ +A +L ++M
Sbjct: 469 DCLIHGFCQEGCVREALELMNEM-VFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMV 527
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+G VP + SY+ L+ AL ++ L +M+E D++ + ++
Sbjct: 528 GRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSLF 577
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 12/157 (7%)
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
I F E + A V+ M N + PS Y+ L F G E +
Sbjct: 437 ILGFCEEGAIQEAKRVYDQMNNEGGI---PSALVYDCLIHGFCQEG-------CVREALE 486
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
L +MV G P + N++I G+ AL++ M V +P++ SY LI
Sbjct: 487 -LMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDM-VGRGCVPDTGSYSPLIDA 544
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
LC + + A L +M G P +NSL L+
Sbjct: 545 LCRKKSFQKAASLLLQMVENGITPDYLIWNSLFHCLS 581
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 141/314 (44%), Gaps = 34/314 (10%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA+K+ + HD STY + L + Y EM ++ +M+ P T +
Sbjct: 105 VKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSE 164
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME-- 236
++ A+ +S+A+ +F +K + C+P+ ++YN + + G+ ++ +Y E
Sbjct: 165 VVRMLGNAKMVSKAIAIFYQIKTRK---CQPTAQAYNSMIIMLMHEGQYEKVHELYNEMS 221
Query: 237 ----------------TIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ C L +M ++G++P ++ + N V
Sbjct: 222 TEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDV 281
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ AL +F +M Y P+ F+Y LI GL GR A EM+R+G P + N+
Sbjct: 282 HGALSLFEEMRHQYCR-PDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNN 340
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR-RGRAGEAMKLLKELQNK 389
+++ L G +++ +K EM + +TY T++ + + RA E + ++
Sbjct: 341 MINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 400
Query: 390 NL-IDGYTYTKLLD 402
+ +TY+ L+D
Sbjct: 401 GISPSSFTYSILID 414
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 129/326 (39%), Gaps = 62/326 (19%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTR---KLG----AAKMYQEMDDVVNQMLATPSFCGTEA 174
EL+N S + D TY + KLG A ++ EM D N M T
Sbjct: 215 ELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKD--NGMQPTTK------ 266
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+Y ++ F + + A+ +F+ M R+ CRP + +Y L GK I+ Y
Sbjct: 267 IYTMLVALFFKLNDVHGALSLFEEM---RHQYCRPDVFTYTELIRGL---GKAGRIDEAY 320
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNY 286
F +M +G PD +N+MI + ++DA+++F +MG V YN
Sbjct: 321 H-----FFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNT 375
Query: 287 L---------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
+ P+SF+Y LI G C R + A L +EM K
Sbjct: 376 IIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEK 435
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
GF P +Y SL+ AL + + E+ E Y ++ + + GR +A
Sbjct: 436 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDA 495
Query: 380 MKLLKELQNKNLI-DGYTYTKLLDVL 404
+ + E+ D Y Y L+ L
Sbjct: 496 INMFDEMNKLGCAPDVYAYNALMSGL 521
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 108/270 (40%), Gaps = 47/270 (17%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R D TY + R LG A E +M T + N +I F +A +L A+
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDT-IVMNNMINFLGKAGRLDDAM 355
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTA-FLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F+ M L C PS+ +YN + A F S+ + + + F++M GI P
Sbjct: 356 KLFQEMGT---LRCIPSVVTYNTIIKALFESKSRAS--------EVPSWFERMKESGISP 404
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS------------ 292
F+ + +I G+ +N + A+ + +M Y L ++
Sbjct: 405 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464
Query: 293 --------------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y +I L GR +A + DEM + G P +YN+L+S LA
Sbjct: 465 QELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 524
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
G ++E + + M E D +Y +L+
Sbjct: 525 GMLDEALSTMRRMQEHGCIPDINSYNIILN 554
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 133/343 (38%), Gaps = 75/343 (21%)
Query: 96 SELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE 155
+ L FNN L PL L F W Q F H +Y + L +
Sbjct: 70 THLSSLFNNPNL--------HPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRA 121
Query: 156 MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
++V N M+ + C + EAR +V + + E S+ SYN
Sbjct: 122 AENVRNSMIKS---CVSSH----------EAR------FVLNLLTHH---EFSLSVTSYN 159
Query: 216 ILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK------------- 262
LF G ++ + CLFK M+NDG+EP++ S N+M+
Sbjct: 160 RLFMVLSRFG--------LIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKA 211
Query: 263 ----------------------GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
GY + + DA ++F M L N SY LIHG
Sbjct: 212 YFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQ-EGCLRNEVSYTNLIHGF 270
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G+ A EL +MK G P +Y LV+A G+ E +K EM+E +
Sbjct: 271 CEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNV 330
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT-YTKLLD 402
TY ++D C+ G+ E M++L + K L+ + L+D
Sbjct: 331 YTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALID 373
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 133/343 (38%), Gaps = 84/343 (24%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDV-VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
D+ TY + LG K+++ D V +++ E Y +I+ F E K+ A+
Sbjct: 224 DSFTYTSLI--LGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALE 281
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+F MK C P + +Y +L AF GK T E ++ F++MV +GIEP++
Sbjct: 282 LFFQMKEDG---CFPDVPTYTVLVAAFCEVGKET-------EALK-FFEEMVENGIEPNV 330
Query: 255 FS-----------------------------------LNSMIKGYILSNHVNDALRIFHQ 279
++ N++I GY + DA+ +
Sbjct: 331 YTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDS 390
Query: 280 MGV--------VYNYL--------------------------PNSFSYDYLIHGLCAQGR 305
M + YN L PN +Y+ LIHGLC
Sbjct: 391 MKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARV 450
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
+A L M + GFVP +++ + + L G+VE+ + + EK + Y
Sbjct: 451 VDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTA 510
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLEDD 407
++D C+ + +A L K + + + T+ LLD L +
Sbjct: 511 LIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKE 553
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 109/245 (44%), Gaps = 19/245 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I+ +AR + A + M + P R++ GK +
Sbjct: 438 YNTLIHGLCKARVVDSAWRLHHLMIKDGFV---PDQRTFCAFIDCLCKMGK--------V 486
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +F+ + E + F ++I GY + +DA +F +M + PNS +++
Sbjct: 487 EQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRM-LFEGCFPNSITFNV 545
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GL +G+ ++A L D M + P+ +Y L+ + + + L +MI
Sbjct: 546 LLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSG 605
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDV------LEDDF 408
+ +TY + CR+GR EA +++ +++ + L+D + Y L++ L+ F
Sbjct: 606 CQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAF 665
Query: 409 GNSIR 413
G IR
Sbjct: 666 GVLIR 670
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 28/229 (12%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL-----FTAFLSRGKNTY 229
+Y+ ++ + +L A V M ++ C PS ++Y+IL F + G
Sbjct: 647 IYDVLVNAYGCIGQLDSAFGVLIRMFDTG---CEPSRQTYSILLKHLIFEKYNKEGMGLD 703
Query: 230 INHVYM-------------ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
+N + E I LF++MV G P++ + + +IKG H++ A R+
Sbjct: 704 LNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRL 763
Query: 277 FHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
F+ M G+ P+ ++ L+ C G + A L D M + +SY LV
Sbjct: 764 FNHMKESGIS----PSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVC 819
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
L G E+ + ++ D + ++ +LD + R+G E +L
Sbjct: 820 GLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQL 868
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 15/233 (6%)
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
E LY +I + +A K S A +FK M C P+ ++N+L GK
Sbjct: 503 ANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEG---CFPNSITFNVLLDGLRKEGK---- 555
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
+E L M +P + + +I+ + + + A QM + PN
Sbjct: 556 ----VEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQM-ISSGCQPNV 610
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y I C QGR A E+ ++K +G + S Y+ LV+A G+++ L
Sbjct: 611 VTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIR 670
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
M + TY +L + E M L +L + N+ +D K+ D
Sbjct: 671 MFDTGCEPSRQTYSILLKHLIFEKYNKEGMGL--DLNSTNISVDNANIWKIAD 721
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 13/297 (4%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 3 IRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
++ M E ++ +I + + + +V +F+ M+ L +I+SY
Sbjct: 63 HARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKSY 118
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N LF A L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 119 NALFKAILRRGR-------YMMAKR-YFNKMLSEGIEPARHTFNVMIWGFFLSGKVETAN 170
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 171 RFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKG 229
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C G+ EA +LKE+ +K L
Sbjct: 230 YVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYL 286
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I+ F + K+ A F+ MK+ E P + +YN + N Y M
Sbjct: 153 FNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI--------NGYYRVKKM 201
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E F +M IEP + + ++IKGY+ + V+DALR+ +M + PN+ +Y
Sbjct: 202 EEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMK-GFGIKPNAITYST 260
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GLC G+ AR + EM K P+ S + L+S+ +G ++ L MI
Sbjct: 261 LLPGLCNAGKMIEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRL 320
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 321 SVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDII 358
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 108/240 (45%), Gaps = 23/240 (9%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
PSF E +YN + A+ A+ F++++ S E R ++ L G
Sbjct: 7 VPSF-DHELVYNVL----HSAKTSEHALQFFRWVERSNLFEHN---RETHLKIIEIL--G 56
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
+ + +NH RC+ M G+E D MI Y V +++++F +M GV
Sbjct: 57 RASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGV 111
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+VE
Sbjct: 112 ERTIK----SYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVE 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+ +M ++ D +TY T+++ R + EA K E++ +N+ TYT L+
Sbjct: 168 TANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLI 227
>gi|326525168|dbj|BAK07854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 500
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 148/320 (46%), Gaps = 26/320 (8%)
Query: 96 SELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQP-------RFRHDASTYHIMTRKLG 148
++ P E L ++ + DP L LF+ A+ P + T ++T +L
Sbjct: 29 TKWPKNLTAEHLHRLVRGERDPRRALALFDAATAAPVSTSVPTQILPSPDTVSLLTSRLA 88
Query: 149 AAKMYQEMDDVVNQMLAT-PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
+A + ++++ A PS E + T++ F + A+ +F+ ++ +L
Sbjct: 89 SAGLLPLATSLLSRSRALFPSNADLEPPFLTLLRAFCRTHRPLDALQLFRSAPSALSLPH 148
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI-- 265
S RSY + + H ++ L M G P + N ++K +
Sbjct: 149 --SARSYTAVLAGL--------VAHSHLPLAHSLLADMRASGFGPTTATYNVLLKAHCSD 198
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ H++DA+R+F + P++ SY+ LI GLC + R A+EL EM G P+
Sbjct: 199 AAAHIDDAVRLFRNIPK-----PDACSYNTLIDGLCRRSRRVEAQELFSEMVENGIAPTV 253
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y ++++ LA G +++ ++ EM + + +TY +++D +C+ GRA A+ LL+
Sbjct: 254 VTYTTIINWLAREGCLDDALEMFDEMGRRGIAPNVVTYSSLIDGLCKGGRAASALDLLER 313
Query: 386 LQNK-NLIDGYTYTKLLDVL 404
L + L + Y+ +++ L
Sbjct: 314 LAKEVKLPNTIIYSSVINGL 333
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 15/270 (5%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY 176
PL L+LF A H A +Y + L A ++ M A+ F T A Y
Sbjct: 130 PLDALQLFRSAPSALSLPHSARSYTAVLAGLVAHSHLPLAHSLLADMRAS-GFGPTTATY 188
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N ++ +A A ++ ++ RN+ +P SYN L R +
Sbjct: 189 NVLL----KAHCSDAAAHIDDAVRLFRNIP-KPDACSYNTLIDGLCRRSRRVEAQE---- 239
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
LF +MV +GI P + + ++I ++DAL +F +MG PN +Y L
Sbjct: 240 ----LFSEMVENGIAPTVVTYTTIINWLAREGCLDDALEMFDEMGR-RGIAPNVVTYSSL 294
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GLC GR +A +L + + ++ +P++ Y+S+++ L G + E ++ L M + R
Sbjct: 295 IDGLCKGGRAASALDLLERLAKEVKLPNTIIYSSVINGLCKEGLLREAMEVLDRMRLQGR 354
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D + ++ +C GRA EA L E+
Sbjct: 355 KPDAGLFGKLIVGLCDAGRAVEAANYLDEM 384
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 15/315 (4%)
Query: 90 QFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGA 149
+F + L N ++C V+ QED L F WA + R+RHD+S Y +M L
Sbjct: 199 KFEGELRYLVRSLNPLQVCAVLLSQEDERNALRFFYWADRLWRYRHDSSVYLVMLEILSK 258
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
K+ Q ++ M EA + ++ ++ A +L A+ V M+ + P
Sbjct: 259 TKLCQGAKRILRLMTRRRIQLCPEA-FGFVMVSYSRAGRLRDAMKVLTLMQKA---GVEP 314
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
++ N + + + + +R ++MV GI P++ + N +IKGY +
Sbjct: 315 NLSICNTAIHILV-------MGNELKKALR-FAERMVLIGIAPNVVTYNCLIKGYCNVHQ 366
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG-FVPSSKSY 328
V+ A+ + QM P+ SY ++ LC R REL +M+ +P +Y
Sbjct: 367 VDQAMELIDQMP-SKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTY 425
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
NSL+ L+ +G +E ++ L E + + VD + Y ++ C+ G+ +A +L+ E+ +
Sbjct: 426 NSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFS 485
Query: 389 KNL-IDGYTYTKLLD 402
K D TYT +LD
Sbjct: 486 KGCDPDVVTYTSVLD 500
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 113/273 (41%), Gaps = 16/273 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTI 179
LE+ A K RF+ D Y + Q+ ++V++M + C + + Y ++
Sbjct: 442 LEILQEAEKL-RFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKG--CDPDVVTYTSV 498
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ F KL +A K M+ C+P+ +Y GK+ R
Sbjct: 499 LDGFCRIGKLDQAK---KMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSL--------EAR 547
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+ + P+ + + ++ G +N+A + +M + + PN + L+H
Sbjct: 548 KMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREM-IGKGFFPNPVEINLLVHS 606
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC G+ + A +L E KG + ++ +++ ++E + L +M + D
Sbjct: 607 LCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPD 666
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+TY ++D + + R EA +L ++ + L+
Sbjct: 667 TVTYTALIDALAKTDRIEEATELTMKMLRQGLV 699
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 16/212 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +++ KL+ A V + M P+ N+L + GK N
Sbjct: 565 YSVVVHGLRREGKLNEACDVVREMIGKGFF---PNPVEINLLVHSLCRDGKPREANQ--- 618
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L K+ +N G ++ + ++I G+ + + AL + M + N P++ +Y
Sbjct: 619 -----LLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDM-YLCNKHPDTVTYTA 672
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI L R + A EL +M R+G VPS +Y S++ G VE+ +K L +M+ K
Sbjct: 673 LIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKS 732
Query: 356 RPVDFIT-YRTVLDEICRRGRAGEAMKLLKEL 386
R F T Y V++++C+ G EA LL E+
Sbjct: 733 R---FQTAYNLVIEKLCKFGYLEEANSLLGEV 761
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 46/261 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + ++ +A+ + M + C P SY + L R K +
Sbjct: 354 YNCLIKGYCNVHQVDQAMELIDQMPSK---GCSPDKVSYYTVM-GLLCRDKR-------L 402
Query: 236 ETIRCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQM-------------G 281
IR L K+M D + PD + NS+I+ H ++AL I +
Sbjct: 403 NEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSA 462
Query: 282 VVYNYL---------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+V+ Y P+ +Y ++ G C G+ A+++ +M +
Sbjct: 463 IVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHH 522
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P++ +Y + ++ L NG+ E K + E+ + ITY V+ + R G+ EA
Sbjct: 523 CKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEAC 582
Query: 381 KLLKELQNKNLIDGYTYTKLL 401
+++E+ K LL
Sbjct: 583 DVVREMIGKGFFPNPVEINLL 603
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 26/280 (9%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
E+ + LE+FN + F S L AAK++Q+M +M P C +
Sbjct: 308 EEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDM----CEMGLIPD-CFS-- 360
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
Y T++ + + + +S A+ KY+ RPS+ +Y +L + G
Sbjct: 361 -YTTMMAGYCKVKDISNAL---KYLGKMLKRGIRPSVATYTLLIDSCCKPGN-------- 408
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
ME LF++M+ +G+ PD+ S N+++ GY H+ A + M GV P+
Sbjct: 409 MEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVS----PDLV 464
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LIHGL +G A+++ DE+ R+GF P ++ +++ + G EE + M
Sbjct: 465 TYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYM 524
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
E D +T +L+ CR EA L ++ + L
Sbjct: 525 SEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGL 564
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 87/213 (40%), Gaps = 12/213 (5%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
EM + + Q + T YNT++ + + L +A F+ + R+ P + +Y
Sbjct: 410 EMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKA---FELLSMMRSAGVSPDLVTY 466
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
NIL + RG + + + ++ G PD+ + ++I G+ + +A
Sbjct: 467 NILIHGLIKRG--------LVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAF 518
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+F M ++ P+ + L++G C A L +M G YNSL+
Sbjct: 519 LLFFYMSE-HHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHG 577
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
G +++ + MIE + IT+ ++
Sbjct: 578 FCSLGNIDDACHLVSMMIEHGIMPNNITHHALV 610
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 22/230 (9%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N+++ E+ +L+ A K MK S+ L SI S + + + S+G ++
Sbjct: 190 NSLLKALLESEQLNLAWDFLKEMK-SQGLGLNASIIS--LFISGYCSQGN--------ID 238
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH---QMGVVYNYLPNSFSY 293
T L +M GI+PD+ + +I + + +A I QMGV + + S
Sbjct: 239 TGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVV 298
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
D G C G+++ A D ++ P+ +NS +S L +G + + K +M E
Sbjct: 299 D----GYCKVGKSEEAM---DVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCE 351
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
D +Y T++ C+ A+K L ++ + + TYT L+D
Sbjct: 352 MGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLID 401
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 1/158 (0%)
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
N Y+ + L +M + I P I NS++K + S +N A +M
Sbjct: 159 NCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLG 218
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
L N+ I G C+QG +L EMK G P +Y ++ +L ++E
Sbjct: 219 L-NASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATS 277
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
L++M + +D ++ +V+D C+ G++ EAM +L+
Sbjct: 278 ILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLE 315
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+I+ L + E D++++ L F + II F+ A +
Sbjct: 462 DLVTYNILIHGLIKRGLVNEAKDILDE-LTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLL 520
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F YM + +LE P + + + L N Y M LF +M++ G++ D+
Sbjct: 521 FFYM-SEHHLE--PDVVTCSALL--------NGYCRTRCMAEANVLFHKMLDAGLKADVI 569
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
NS+I G+ +++DA + M + + +PN+ ++ L+ G
Sbjct: 570 LYNSLIHGFCSLGNIDDACHLVSMM-IEHGIMPNNITHHALVLG 612
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 174/400 (43%), Gaps = 57/400 (14%)
Query: 57 LCSCYSAIALSRSSSR--GVGKRSKADSKPALDDTQFRCAVSELPP----RFNNEELCNV 110
+C C + S SSR GV + S+P+ PP R E++ +
Sbjct: 39 VCCCSGVLGGSPPSSRTAGVSSPGLSPSRPSKRRIGRARVQPRAPPPCDERRAAEDVIHA 98
Query: 111 MTLQEDPLVCLELFNWASKQPRFRHDASTYHIM---TRKLGAAKMYQEMDDVVNQMLATP 167
+ + P LE F A+++PR H ++ + M R G E+ DV+ + +
Sbjct: 99 LRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKA 158
Query: 168 SF---------CGTEA----------------------LYNTIIYFFAEARKLSRAVYVF 196
+ G E YN ++YF ++ A+ V+
Sbjct: 159 NVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY 218
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
+ M + PS+R+Y++L AF R +ET+ L ++M G++P+++S
Sbjct: 219 RVMMVDGVV---PSVRTYSVLMVAFGKRRD--------VETVLWLLREMEAHGVKPNVYS 267
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
I+ + ++A RI +M P+ ++ LI LC GR +A+++ +M
Sbjct: 268 YTICIRVLGQAKRFDEAYRILAKM-ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 326
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD-FITYRTVLDEICRRGR 375
K+ P +Y +L+ NG+ ++V +W ++ D + Y V+D +C+ GR
Sbjct: 327 KKSDQKPDRVTYITLLDKFGDNGD-SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 385
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLD--VLEDDFGNSI 412
EA+++ E++ K ++ + Y+Y L+ + D FG+++
Sbjct: 386 VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 425
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 134/328 (40%), Gaps = 65/328 (19%)
Query: 126 WASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
W K+ + D TY + K G Q + ++ N M A + Y +I +
Sbjct: 324 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKAD-GYNDNVVAYTAVIDALCQ 382
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------------------N 227
++ A+ +F MK + P SYN L + FL + N
Sbjct: 383 VGRVFEALEMFDEMKQKGIV---PEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 439
Query: 228 TYINHVYM-------ETIRCL--FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
Y + +++ E+I+ + ++ M + GI PD+ + N+++ G S + A R+FH
Sbjct: 440 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 499
Query: 279 Q---MGV-----VY--------------------------NYLPNSFSYDYLIHGLCAQG 304
+ MGV Y N +P+ + + LI L G
Sbjct: 500 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 559
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R A + ++K P+ +YN+L++ L G+V+E + L EM P + ITY
Sbjct: 560 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 619
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLI 392
T+LD +C+ G +A+ +L + K I
Sbjct: 620 TILDCLCKNGAVNDALDMLYSMTTKGCI 647
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 70/327 (21%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI-IYFFAEARKLSRAVYVFK 197
+Y I R LG AK + E ++ +M C + + +T+ I +A ++S A VF
Sbjct: 267 SYTICIRVLGQAKRFDEAYRILAKM--ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFW 324
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV---------------YMETIRCL- 241
MK S +P +Y L F G + + + Y I L
Sbjct: 325 KMKKSDQ---KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALC 381
Query: 242 -----------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV-------- 282
F +M GI P+ +S NS+I G++ ++ DAL +F M +
Sbjct: 382 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 441
Query: 283 ----VYNY----------------------LPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
NY +P+ + + ++ GL GR A+ + E+
Sbjct: 442 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 501
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
K G P + +Y ++ + + +E VK ++MIE D + +++D + + GR
Sbjct: 502 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 561
Query: 377 GEAMKLLKELQNKNL--IDGYTYTKLL 401
EA ++ +L+ NL DG TY LL
Sbjct: 562 DEAWRIFYQLKEMNLEPTDG-TYNTLL 587
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 105/220 (47%), Gaps = 13/220 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +++ A++ +L A VF +K + P +Y ++ K + E
Sbjct: 479 NAVLFGLAKSGRLGMAKRVFHELKA---MGVSPDTITYTMMIKCCSKASK-------FDE 528
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
++ +F M+ + PD+ ++NS+I + ++A RIF+Q+ + N P +Y+ L
Sbjct: 529 AVK-IFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM-NLEPTDGTYNTL 586
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ GL +G+ K L +EM + P+ +YN+++ L NG V + + L+ M K
Sbjct: 587 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 646
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
D +Y TV+ + + R EA + +++ K LI Y
Sbjct: 647 IPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYA 685
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 12/195 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
LYN++I + + A +F MK L C P +YN+L A GK+ I
Sbjct: 791 GLYNSLICGLVDENLIDIAEGLFAEMKE---LGCGPDEFTYNLLLDAM---GKSMRI--- 841
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
E + + ++M G E + N++I G + S + A+ +++ + + + P +Y
Sbjct: 842 --EEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNL-MSQGFSPTPCTY 898
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
L+ GL GR ++A L +EM G + YN L++ + G E+ +M++
Sbjct: 899 GPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVD 958
Query: 354 KQRPVDFITYRTVLD 368
+ D +Y ++D
Sbjct: 959 QGINPDIKSYTIIID 973
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L K+ + G+ NS+I G + N ++ A +F +M + P+ F+Y+ L+ +
Sbjct: 777 LVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL-GCGPDEFTYNLLLDAM 835
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
R + ++ +EM RKG+ + +YN+++S L + +E+ + + ++ +
Sbjct: 836 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 895
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL 386
TY +LD + + GR +A L E+
Sbjct: 896 CTYGPLLDGLLKAGRIEDAENLFNEM 921
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 103/257 (40%), Gaps = 32/257 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKN------SRNLECRPSIRSYNILFTA-------FL 222
YNT+IY + + + A +F MK + PS ++ A FL
Sbjct: 653 YNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 712
Query: 223 SRGKNTYIN--HVYMETI--------RCLFKQMV-NDGIEPDIFSLNSMIKGYILSNHVN 271
G T + H ME I F +++ + GI D F L +IK
Sbjct: 713 QPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKAL 772
Query: 272 DA---LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+A ++ F GV + Y+ LI GL + A L EMK G P +Y
Sbjct: 773 EAHELVKKFKSFGVSL----KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTY 828
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N L+ A+ + +EE +K EM K ++TY T++ + + R +A+ L L +
Sbjct: 829 NLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 888
Query: 389 KNLIDGY-TYTKLLDVL 404
+ TY LLD L
Sbjct: 889 QGFSPTPCTYGPLLDGL 905
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 8/166 (4%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI---FHQMGVVYNYLPNSFSYDYLI 297
LF +M G PD F+ N ++ S + + L++ H+ G Y+ +Y+ +I
Sbjct: 812 LFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYV----TYNTII 867
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GL R + A +L + +GF P+ +Y L+ L G +E+ EM+E
Sbjct: 868 SGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCK 927
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ Y +L+ G + L +++ ++ + D +YT ++D
Sbjct: 928 ANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+++ +G + +EM V +M + T YNTII ++R+L +A+ +
Sbjct: 824 DEFTYNLLLDAMGKSMRIEEMLKVQEEM-HRKGYESTYVTYNTIISGLVKSRRLEQAIDL 882
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ Y S+ P+ +Y L L G+ +E LF +M+ G + +
Sbjct: 883 Y-YNLMSQGFS--PTPCTYGPLLDGLLKAGR--------IEDAENLFNEMLEYGCKANCT 931
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
N ++ G+ ++ + +F M V P+ SY +I
Sbjct: 932 IYNILLNGHRIAGNTEKVCHLFQDM-VDQGINPDIKSYTIII 972
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 150 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLASGX- 204
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 205 --XPDVYTYSVLINGLCKESK--------MDGANELFDEMLVKGLVPNXVTFTTLIDGHC 254
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A +L DEM KG P
Sbjct: 255 KNGRVDLAMEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDK 313
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 314 FTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 373
Query: 386 LQNKNLI-DGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 374 MLSVGLXPDAGTYTMIIN 391
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF-----HQMGVVYN---------------------- 285
DI+ + +I Y+ S + DA+ + H++ V ++
Sbjct: 67 DIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 126
Query: 286 -------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++
Sbjct: 127 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 186
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M+ D TY +++ +C+ + A +L E+ K L+ + T+
Sbjct: 187 GDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTF 246
Query: 398 TKLLD 402
T L+D
Sbjct: 247 TTLID 251
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 125/269 (46%), Gaps = 16/269 (5%)
Query: 136 DASTYHIMTRKL-GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
D+ Y IM L GA + + + + + M F A+YN +I + L A+
Sbjct: 178 DSHVYSIMVHGLCGAGRAGEAVALLTDAM--GKGFVPNVAVYNALIDGYCSTGDLELAID 235
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+FK M++ C P++R+Y L F GK +E L+ +M+ G+ P++
Sbjct: 236 IFKGMQSK---GCLPNVRTYTQLICGFCKSGK--------VERAMVLYSRMIEAGLAPNV 284
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ ++I+G H+ A R+ H M PN ++ LI LC GR + A++
Sbjct: 285 VTYTTLIQGQCSEGHLEHAFRLLHSMEAC-GLAPNEWTCLVLIDALCKHGRIEEAQQFLG 343
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+ +KG + Y S++ AL +G+ + + ++I + D Y +++D +CR
Sbjct: 344 SLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCREN 403
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ EA+ LL ++ + + +T L+D
Sbjct: 404 KLLEAISLLNDMIESGVQANAVPFTILID 432
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 128/268 (47%), Gaps = 16/268 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVYVFK 197
TY + + L A M +E V M P C ++ +Y+ +++ A + AV +
Sbjct: 146 TYAALLQGLCGAGMVREAMAVFAGMW--PDGCAPDSHVYSIMVHGLCGAGRAGEAVAL-- 201
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
+ ++ P++ YN L + S G +E +FK M + G P++ +
Sbjct: 202 -LTDAMGKGFVPNVAVYNALIDGYCSTGD--------LELAIDIFKGMQSKGCLPNVRTY 252
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
+I G+ S V A+ ++ +M + PN +Y LI G C++G ++A L M+
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRM-IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSME 311
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
G P+ + L+ AL +G +EE + L +++K V+ + Y +++D +C+ G+
Sbjct: 312 ACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFD 371
Query: 378 EAMKLLKELQNKNLI-DGYTYTKLLDVL 404
A L++++ + + D + Y+ L+D L
Sbjct: 372 GAHNLMQKIITEGFVPDAHMYSSLIDGL 399
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 8/164 (4%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF---HQMGVVYNYLPNSFSYDYLIH 298
++ G+ PD + S + GY + A R+F Q G F+Y L+
Sbjct: 97 LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCART----PFTYAALLQ 152
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC G + A + M G P S Y+ +V L G E V L + + K
Sbjct: 153 GLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVP 212
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLL 401
+ Y ++D C G A+ + K +Q+K + TYT+L+
Sbjct: 213 NVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLI 256
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 116/281 (41%), Gaps = 24/281 (8%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLS 190
+ D TY + R ++ + ++ QM+ P+ YNT+I +A +S
Sbjct: 456 KPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNL----TTYNTLIKGYANLGLVS 511
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY----------METIRC 240
+A F +KN + C+P+ SY +L L KN+Y + V M+ +
Sbjct: 512 QA---FSSLKNMIDNGCKPNDESYTVLLGLLLK--KNSYHDLVADSISLWKIVDMKVLEE 566
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L ++++ + + I+ + + +A M N P+ Y +I
Sbjct: 567 LLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSA-NLTPSEDVYTCMIECC 625
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
K A D M ++ ++P +SY ++ AL G +++ K+ D
Sbjct: 626 YRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDE 685
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT-YTKL 400
I ++ ++D + ++G + +LL ++ +N G Y++L
Sbjct: 686 IAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 8/168 (4%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLI 297
L ++++ +G PD +S+I G N + +A+ + + M GV N +P + LI
Sbjct: 376 LMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVP----FTILI 431
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
+ R+ + + + D M G P +Y + + +G +E+ + +MI+
Sbjct: 432 DKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVR 491
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
+ TY T++ G +A LK + N + +YT LL +L
Sbjct: 492 PNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLL 539
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ M+ GI P+ + +S++ GY L N VN+A IF M + N +SY+ +I+G
Sbjct: 157 VLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSL-RGVTANVWSYNIMINGF 215
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C T A L +EM + +P +YNSL++ L +G++ +K + EM ++ +P D
Sbjct: 216 CKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDI 275
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
ITY ++LD +C+ + +A+ LLK L+++ + + YTYT L+D L
Sbjct: 276 ITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGL 320
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 5/160 (3%)
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+ +F M G+ +++S N MI G+ ++A+ +F +M +P+ +Y+ LI+
Sbjct: 190 KGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHC-RKLIPDVVTYNSLIN 248
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC G+ A +L DEM +G P +Y+SL+ AL N +V++ + L + ++
Sbjct: 249 GLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRP 308
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYT 398
+ TY ++D +C+ GR +A + ++L L+ GY T
Sbjct: 309 NMYTYTILIDGLCKGGRLEDAHNIFEDL----LVKGYNIT 344
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 98/220 (44%), Gaps = 18/220 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR---PSIRSYNILFTAFLSRGKNTYINH 232
YN +I F + + A+ +F+ M CR P + +YN L GK +Y
Sbjct: 208 YNIMINGFCKIKMTDEAMNLFEEM------HCRKLIPDVVTYNSLINGLCKSGKISYALK 261
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
L +M + G PDI + +S++ ++ V+ A+ + + PN ++
Sbjct: 262 --------LVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKD-QGIRPNMYT 312
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC GR ++A + +++ KG+ + +Y ++ G +E + L +M
Sbjct: 313 YTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMK 372
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ + +TY ++ + +A LL+E+ + L+
Sbjct: 373 DNSCFPNALTYEIIIRSLFDNDENDKAENLLREMITRGLL 412
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 138/309 (44%), Gaps = 52/309 (16%)
Query: 133 FRHDAS----TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEAR 187
RH + TY+I+ R L A +E VV M + C A+ YNT++ F A
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRG--AGCAPNAVTYNTLVAAFCRAG 201
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L A V M+ N +P++ ++N + G+ ME R +F +MV
Sbjct: 202 ELDGAERVVSLMREEGN--AKPNLVTFNSMVNGLCKAGR--------MEGARKVFDEMVR 251
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLP---------------- 288
+G+ PD+ S N+++ GY ++++L +F +M G+V + +
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
Query: 289 ---------------NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
N ++ LI G C +G +A +EM++ G PS YN+L++
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 371
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI- 392
G ++ + + EM K+ D +TY T++ C+ G A +L +++ K ++
Sbjct: 372 GYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 431
Query: 393 DGYTYTKLL 401
D TY+ L+
Sbjct: 432 DAITYSSLI 440
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 116/228 (50%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ ++A S ++ +++ P++ +YNIL A +RG+ +
Sbjct: 121 YNAVLLALSDASLPSARRFLSSMLRHG----VAPNVYTYNILVRALCARGR--------L 168
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + M G P+ + N+++ + + ++ A R+ M N PN +++
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 228
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+++GLC GR + AR++ DEM R+G P SYN+L+S G + E++ EM ++
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D +T+ +++ C+ G +A+ L+ +++ + L ++ T+T L+D
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 13/230 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E + +I F + L A+ + M R +PS+ YN L + G+
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEM---RKCGIQPSVVCYNALINGYCKLGR------ 378
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
M+ R L ++M ++PD+ + +++I GY +++ A ++ +M + LP++ +
Sbjct: 379 --MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM-LKKGVLPDAIT 435
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC + R +A EL + M + G P +Y +L+ G VE+ + EMI
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
K D +TY +++ + + R EA +LL +L +++ + D Y L+
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 21/238 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ +L AV V M R C P+ +YN L AF G+
Sbjct: 155 YNILVRALCARGRLEEAVGVVGDM---RGAGCAPNAVTYNTLVAAFCRAGELDG-----A 206
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L ++ N +P++ + NSM+ G + + A ++F +M V P+ SY+
Sbjct: 207 ERVVSLMREEGN--AKPNLVTFNSMVNGLCKAGRMEGARKVFDEM-VREGLAPDVVSYNT 263
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C G + + EM ++G VP ++ SL+ A G +E+ V + +M E+
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN----------KNLIDGYTYTKLLDV 403
++ +T+ ++D C++G +A+ ++E++ LI+GY +D+
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 381
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 26/231 (11%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + R L K + ++ ML E Y T+I + + +A+ +
Sbjct: 432 DAITYSSLIRGLCEEKRLNDACELFENMLQL-GVQPDEFTYTTLIDGHCKEGNVEKALSL 490
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK----QMVNDGIE 251
M L P + +Y++L LS+ T H R LFK V D I+
Sbjct: 491 HDEMIRKGVL---PDVVTYSVLING-LSKSARTKEAH------RLLFKLYHEDPVPDNIK 540
Query: 252 PDIF----------SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
D S+ +++KG+ + + +A +++ M + N+ + Y LIHG C
Sbjct: 541 YDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM-LDRNWKLDGSVYSILIHGHC 599
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
G + A +M R GF P+S S SLV L G V E + +++
Sbjct: 600 RGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 13/225 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
RF DA TY+ + K D++ QM+ + T+ YN I+ F + +L
Sbjct: 205 RFPPDAVTYNTLADGWCRVKDTSRALDILRQMVES-GIAPTKTTYNIILKGFFRSGQLQH 263
Query: 192 AVYVFKYMK--NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A F MK S + C+P + SY + G+ ++ R +F +M +G
Sbjct: 264 AWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGVAGQ--------LDKARKVFDEMSREG 315
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
P I + N++I+ +V DA+ +F M + Y+PN +Y LI GLC G+ A
Sbjct: 316 CTPSIATYNALIQVTCKKGNVEDAVAVFDDM-IRKGYIPNVVTYTVLIRGLCHAGKIDRA 374
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+L D+MKR+G P+ ++YN L+ L G++E+ + +L+E + K
Sbjct: 375 MKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKAL-HLFETMSK 418
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 33/240 (13%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR--PSIRSYNILFTAFLSRGKNTYINH 232
L+N+++ ++R +A + R LE R P +YN L + R K+T
Sbjct: 178 LFNSLLDALVKSRHAGKAASLV------RALERRFPPDAVTYNTLADGW-CRVKDTS--- 227
Query: 233 VYMETIRCL--FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV----YNY 286
R L +QMV GI P + N ++KG+ S + A F QM N
Sbjct: 228 ------RALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENC 281
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
P+ SY ++HGL G+ AR++ DEM R+G PS +YN+L+ G VE+ V
Sbjct: 282 KPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVA 341
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL---------QNKNLIDGYTY 397
+MI K + +TY ++ +C G+ AMKLL ++ Q N++ GY +
Sbjct: 342 VFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLF 401
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 18/142 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I A K+ RA+ + MK C P++++YN+L G +
Sbjct: 358 YTVLIRGLCHAGKIDRAMKLLDKMKRE---GCEPNVQTYNVLIGYLFEEGD--------I 406
Query: 236 ETIRCLFKQMVNDGIE--PDIFSLNSMIKGYILSNHVND---ALRIFHQMGVVYNYLPNS 290
E LF+ M + G E P+ + N +I + D A R+ +M V YLP
Sbjct: 407 EKALHLFETM-SKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEM-VDRGYLPRR 464
Query: 291 FSYDYLIHGLCAQGRTKNAREL 312
F ++ +++GL G + +REL
Sbjct: 465 FMFNRVLNGLMLTGNQELSREL 486
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 35/312 (11%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
++ F WA K+ F+HD++TY + R L + + EM + M+ +P G A ++ I+
Sbjct: 108 IQFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGP-AEWSEIL 166
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR- 239
+A+ +++A+ VF +K + C P+ YN L + G + I+ +Y E
Sbjct: 167 KILGKAKMVNKALSVFYQIKGRK---CNPTATVYNTLILMLMHEGHHEKIHELYNEICSE 223
Query: 240 --C-------------------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
C LF +M +G+ P +++ Y N V
Sbjct: 224 GNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEA 283
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
ALR+ +M P F+Y LI GL GR +A L M + G P N+L+
Sbjct: 284 ALRLVEEMK-GKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLI 342
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR-RGRAGEAMKLLKELQNKNL 391
+ L G +E+ +K +M Q + +TY TV+ I + A EA ++++ +
Sbjct: 343 NILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGI 402
Query: 392 I-DGYTYTKLLD 402
+TY L+D
Sbjct: 403 APSSFTYAILID 414
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 124/316 (39%), Gaps = 48/316 (15%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
EL+N + D TY + G + Y + ++M TE +Y TI+
Sbjct: 215 ELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKEN-GLHPTEKIYTTILA 273
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ + K+ A+ + + MK C P++ +Y L GK ++ Y L
Sbjct: 274 MYFKLNKVEAALRLVEEMKGKG---CAPTVFTYTELIKGL---GKVGRVDDAY-----SL 322
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL------ 287
F M+ DG +PD+ +N++I + + DAL++F +M V YN +
Sbjct: 323 FFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFE 382
Query: 288 ---------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
P+SF+Y LI G C R + A L +EM KGF P
Sbjct: 383 SKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPA 442
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y SL+ +L E + E+ E Y ++ GR +A+ L E
Sbjct: 443 AYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEX 502
Query: 387 QNKNL-IDGYTYTKLL 401
+ D YTY L+
Sbjct: 503 EKLGCSPDVYTYNALM 518
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA--LYNTIIYFFAEARKLSRAVYV 195
+ Y + LG AK Y+ +++ ++ CG + +Y +I F +LS AV +
Sbjct: 442 AAYCSLIDSLGRAKRYEAANELFQELKEN---CGRSSARVYAVMIKHFGNCGRLSDAVDL 498
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F L C P + +YN L + + G ++ L + M +G PDI
Sbjct: 499 FC---EXEKLGCSPDVYTYNALMSGMIRAG--------MIDEAHSLMRNMRENGCTPDIK 547
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N ++ G + A+ +F +M +P++ SY+ ++ L G + A +L E
Sbjct: 548 SHNIILNGLAKTGGPKRAIEMFTKMK-ESEIMPDAVSYNTILSCLSRAGMFEMAAKLMRE 606
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEE 343
MK KGF S +Y+S++ A+ G+V+E
Sbjct: 607 MKLKGFEYDSITYSSILEAV---GKVDE 631
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 8/149 (5%)
Query: 260 MIKGYILSNHVNDALRIF---HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
MIK + ++DA+ +F ++G P+ ++Y+ L+ G+ G A L M
Sbjct: 482 MIKHFGNCGRLSDAVDLFCEXEKLGCS----PDVYTYNALMSGMIRAGMIDEAHSLMRNM 537
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
+ G P KS+N +++ LA G + ++ +M E + D ++Y T+L + R G
Sbjct: 538 RENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMF 597
Query: 377 GEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
A KL++E++ K D TY+ +L+ +
Sbjct: 598 EMAAKLMREMKLKGFEYDSITYSSILEAV 626
>gi|357119238|ref|XP_003561352.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Brachypodium distachyon]
Length = 732
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 137/318 (43%), Gaps = 31/318 (9%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
F+WA +Q FRH +H + L AA + D + + + A L ++
Sbjct: 150 FFHWAGRQKGFRHCFPAFHALASLLSAAGLPAAADQLPDLIRAHGKPVSHPQL-TLLVRL 208
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG----------------- 225
AR+ RA+Y + ++ +++ P + + N + A + G
Sbjct: 209 HTAARRPLRALYTLRRFRHEFSVQ--PQVHACNRVLGALAAAGHVEDALKLFDEMSEGGV 266
Query: 226 ---KNTY------INHVYM-ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
T+ + H M E I + +M ++ PD+F +++K + H+ +R
Sbjct: 267 RPMPVTFAIIVRALGHAGMTERILEMIGRMRDEVCRPDVFVYTALVKTMMRRGHIEGCIR 326
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
++ +MG P++ +Y ++ GLC G + A +L +EM++KG + + SLV
Sbjct: 327 VWEEMG-TDGVEPDAMAYATMVGGLCNAGMVEQAAKLFEEMRKKGLLVDRTVFASLVDGY 385
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY 395
+G V + + L EM++ D TY T++ +C GR +A K+ + + + L+
Sbjct: 386 VADGRVGDGCRVLKEMVDAGYRADLGTYNTLIGGLCGIGREDKAYKMFQIILQEELVPSS 445
Query: 396 TYTKLLDVLEDDFGNSIR 413
L V D G I+
Sbjct: 446 ETVSQLLVCYADKGEMIK 463
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 128/319 (40%), Gaps = 64/319 (20%)
Query: 132 RFRHDAST---YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL---YNTIIYFFAE 185
RFRH+ S H R LGA ++D + ++ S G + + I+
Sbjct: 224 RFRHEFSVQPQVHACNRVLGALAAAGHVEDAL-KLFDEMSEGGVRPMPVTFAIIVRALGH 282
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
A R + + + R+ CRP + Y L + RG ++E ++++M
Sbjct: 283 AGMTER---ILEMIGRMRDEVCRPDVFVYTALVKTMMRRG--------HIEGCIRVWEEM 331
Query: 246 VNDGIEPDIFS-----------------------------------LNSMIKGYILSNHV 270
DG+EPD + S++ GY+ V
Sbjct: 332 GTDGVEPDAMAYATMVGGLCNAGMVEQAAKLFEEMRKKGLLVDRTVFASLVDGYVADGRV 391
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
D R+ +M V Y + +Y+ LI GLC GR A ++ + ++ VPSS++ +
Sbjct: 392 GDGCRVLKEM-VDAGYRADLGTYNTLIGGLCGIGREDKAYKMFQIILQEELVPSSETVSQ 450
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRP-----VDFITYRTVLDEICRRGRAGEAMKLLKE 385
L+ A GE+ + + +++E + P VDF+ C+ GR +A+++
Sbjct: 451 LLVCYADKGEMIKIFGLVDKLVELRLPATDYLVDFLKLFA-----CKDGRELKAVEVFDT 505
Query: 386 LQNKNLIDGYTYTKLLDVL 404
++ + TY +++ L
Sbjct: 506 MRQRGYYSVSTYNIIIENL 524
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 111/258 (43%), Gaps = 20/258 (7%)
Query: 151 KMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
K++ +D +V L T+ L + + F + + +AV VF M+ S
Sbjct: 463 KIFGLVDKLVELRLPA-----TDYLVDFLKLFACKDGRELKAVEVFDTMRQRGYY----S 513
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV-NDGIEPDIFSLNSMIKGYILSNH 269
+ +YNI+ L + + LF++M +D +P+ + + MI ++ +
Sbjct: 514 VSTYNIIIENLLKIKER--------KKALLLFEEMQGSDDCKPESCTYSHMIPCFVEEGN 565
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC-DEMKRKGFVPSSKSY 328
+ +A ++ M + ++P+ +Y L+ GLC G A L D + P Y
Sbjct: 566 IEEACSCYNSM-MKAEWIPSISAYCSLVKGLCKIGEINAAVSLVTDCLGNVENGPMEFKY 624
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ + E+ +K + EMIE V+ I + ++ C+ + EA K+ +++
Sbjct: 625 TLTILEACRSKSPEKVMKVVDEMIELGYSVEEIIFCAIIYGFCKYATSTEARKVFSVMRD 684
Query: 389 KNLIDGYTYTKLLDVLED 406
+N+I + D+L +
Sbjct: 685 RNIISEANFIVYEDMLNE 702
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ + + K+S A +++ M + P+ SYN + +G +
Sbjct: 456 YNSLLSWLCKEGKMSEATTLWQKMLDKG---LAPTKVSYNSMILGHCRQGN--------L 504
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F M++ G++P++ + + ++ GY + A +F +M V N +P+ F+Y+
Sbjct: 505 DMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRM-VDENIVPSDFTYNI 563
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
I+GLC GRT A+++ + KGFVP +YNS++ G V + EM E
Sbjct: 564 KINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESG 623
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ ITY T+++ C+ A+K+ E++NK L +D Y L+D
Sbjct: 624 VSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALID 671
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 14/217 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A Y +I F + + + A ++F + + P+ YN L + Y N
Sbjct: 664 AAYGALIDGFCKKQDIETASWLFSELLDGG---LSPNSVIYNSLISG--------YRNLN 712
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
ME L K+M+ +GI D+ + ++I G + + AL ++ +M +P+ Y
Sbjct: 713 NMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSA-KGIIPDIIIY 771
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI+GLC +G+ +NA+++ EM+R P+ YN+L++ G ++E + EM++
Sbjct: 772 TVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLD 831
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
K + TY +++ + G + A+K L L+ K+
Sbjct: 832 KGLTPNDTTYDILINGKIKGGNS--ALKSLLSLKFKD 866
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 3/158 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L+ QM N I P +F +NS+I+G++ +A ++F + V + N F+Y+ L+ L
Sbjct: 406 LYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE--AVACDIANIFTYNSLLSWL 463
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G+ A L +M KG P+ SYNS++ G ++ +M++ +
Sbjct: 464 CKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNV 523
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
ITY ++D + G A + + ++N++ +TY
Sbjct: 524 ITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTY 561
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 122/324 (37%), Gaps = 85/324 (26%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC- 207
A ++Q+M D T+ YN++I L A VF M L+C
Sbjct: 472 ATTLWQKMLD--------KGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM-----LDCG 518
Query: 208 -RPSIRSYNILFTAFLSRGKNTYINHVYMETI---------------------------R 239
+P++ +Y+IL + G Y +V+ + +
Sbjct: 519 LKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQ 578
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYL 296
+ K+ V G P + NS++ G+I V+ AL + +M GV PN +Y L
Sbjct: 579 DMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVS----PNVITYTTL 634
Query: 297 IHGLCAQGRTKNARELCDEMKRK-----------------------------------GF 321
I+G C T A ++ +EM+ K G
Sbjct: 635 INGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGL 694
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P+S YNSL+S +E + M+ + D TY T++D + + GR A+
Sbjct: 695 SPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALD 754
Query: 382 LLKELQNKNLI-DGYTYTKLLDVL 404
L E+ K +I D YT L++ L
Sbjct: 755 LYSEMSAKGIIPDIIIYTVLINGL 778
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 18/229 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I F + A+ + M+N + LE I +Y L F + +
Sbjct: 631 YTTLINGFCKNNNTDLALKMRNEMRN-KGLEL--DIAAYGALIDGFCKKQD--------I 679
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
ET LF ++++ G+ P+ NS+I GY N++ AL + +M G+ + +
Sbjct: 680 ETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQ----T 735
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GL +GR A +L EM KG +P Y L++ L G++E K L EM
Sbjct: 736 YTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEME 795
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
+ Y ++ + G EA +L E+ +K L T +L
Sbjct: 796 RDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDIL 844
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 13/218 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A Y+ +I F + + A + K M R+ PS ++ + A + +G
Sbjct: 280 AAYSIVIQAFCKNLDVELACGLLKDM---RDKGWVPSEGTFTSVIGACVKQGN------- 329
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+E +R L +MV+ G++ ++ +++KGY + + AL F +M PN +Y
Sbjct: 330 MVEALR-LKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNE-NGPSPNRVTY 387
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI C G A +L +MK K P+ NSL+ L E E L++
Sbjct: 388 AVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGF-LKVESREEASKLFDEAV 446
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ TY ++L +C+ G+ EA L +++ +K L
Sbjct: 447 ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGL 484
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 111/232 (47%), Gaps = 19/232 (8%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN ++ + +A KL+ A+ F + S + P I+ N L TA + KN I
Sbjct: 176 IYNYLLNSYIKANKLNDAIGCFNRLVES---DIVPWIKFLNFLLTALV---KNDMIYEA- 228
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
R ++++MV G+ D F+++ M++ + N+ +A + F + GV + +
Sbjct: 229 ----REVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLD----AA 280
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y +I C + A L +M+ KG+VPS ++ S++ A G + E ++ EM
Sbjct: 281 AYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEM 340
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLD 402
+ ++ + T++ C++ + A++ ++ +N + TY L++
Sbjct: 341 VSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIE 392
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
N ++H T R F + DI N ++ YI +N +NDA+ F+++ V +
Sbjct: 155 NILVDHFIGSTKRFDF--------DSDIRIYNYLLNSYIKANKLNDAIGCFNRL-VESDI 205
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+P ++L+ L ARE+ ++M KG + + ++ A + EE K
Sbjct: 206 VPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKK 265
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
E + +D Y V+ C+ A LLK++++K +
Sbjct: 266 FFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWV 311
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 138/296 (46%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P ++E + NV+ ++ L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRNLVPSIDHELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E L+ +I + +A + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEE---LGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF L RG+ YM R F +M+++GIEP + N M+ G+ LS V A
Sbjct: 118 YDALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M +P+ +Y+ +++G C + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMKS-REIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
V++ ++ + EM + ITY T+L +C + EA +LKE+ +K
Sbjct: 229 GYVSVDRVDDALRFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDK 284
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML + T +N +++ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKML-SEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSR---EIMPDVVTYNTMV-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR +M
Sbjct: 193 ------NGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S G
Sbjct: 247 KG-FGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+++ L MI P + Y +++ C+ G +A+KLL ++ K++I
Sbjct: 306 DLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDII 358
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y + V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SYD L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ CR + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 19/245 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 107 FDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGD--------I 158
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + G+ P + S N+++ GYI +++ R+ M + P+ ++Y
Sbjct: 159 RIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM-LASGVQPDVYTYSV 217
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM KG VP+S ++ +L+ NG V+ ++ +M+ +
Sbjct: 218 LINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSI 412
D ITY T++ +C++G +A L+ E+ K L D TYT L+D + D +
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAF 337
Query: 413 RHHLR 417
H R
Sbjct: 338 EHRKR 342
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 154 KDGDIRIAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLAS--- 206
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K N LF +M+ G+ P+ + ++I G+
Sbjct: 207 GVQPDVYTYSVLINGLCKESKIDDANE--------LFDEMLVKGLVPNSVTFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A L DEM KG P
Sbjct: 259 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ +G+++ ++ MI++ +D + Y ++ +CR G++ +A K+L+E
Sbjct: 318 ITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLKPDARTYTMIIN 395
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 129/309 (41%), Gaps = 55/309 (17%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F D TY + L E + +M A + Y +I + ++ A
Sbjct: 42 FHPDVYTYTAVIHALCVENRLHEARKFLEEM-ANRNLTPNVVTYTVLIDGLCKGGRVDEA 100
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFL--SRGKNTYINHVYMETIRCLFKQMVNDGI 250
V + M+ +C P+ +YN L + R Y L ++MV G
Sbjct: 101 VALLSKMRK----KCVPTAVTYNSLISGLCKAERASEAYD----------LLEEMVYSGC 146
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
PDIF+ ++I G+ S +DALR+F Q+ V + P+ +Y LI GLC +GR K A
Sbjct: 147 IPDIFTYTTLITGFCKSKKSDDALRVFEQL-VARGFRPDVVTYSCLIDGLCKEGRLKEAI 205
Query: 311 ELCDEMKRKG-FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL-- 367
+L M + G +P++ +YNSL+S G+++E + L M E D +TY T++
Sbjct: 206 DLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 265
Query: 368 ---------------------------------DEICRRGRAGEAMKLLKELQNKNLIDG 394
D +CR R +A+ +L E++ K+
Sbjct: 266 FCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPT 325
Query: 395 -YTYTKLLD 402
YTY +LD
Sbjct: 326 VYTYNTILD 334
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 16/251 (6%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYV 195
A TY+ + L A+ E D++ +M+ S C + Y T+I F +++K A+ V
Sbjct: 115 AVTYNSLISGLCKAERASEAYDLLEEMVY--SGCIPDIFTYTTLITGFCKSKKSDDALRV 172
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG-IEPDI 254
F+ + +R RP + +Y+ L G+ E I LF +M+ G P+
Sbjct: 173 FEQLV-ARGF--RPDVVTYSCLIDGLCKEGR-------LKEAID-LFGRMIKSGSCMPNT 221
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ NS+I G+ +++A+ + +M + P+ +Y L++G C R +A +L +
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSS-PDVVTYTTLMNGFCKLARLDDAYDLLN 280
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M RKG P ++ SL+ L + + V L EM K TY T+LD CR
Sbjct: 281 QMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRAN 340
Query: 375 RAGEAMKLLKE 385
+ EA K + E
Sbjct: 341 QLEEARKFMLE 351
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+MV+ G PD+++ ++I + N +++A + +M N PN +Y LI GL
Sbjct: 33 FLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMAN-RNLTPNVVTYTVLIDGL 91
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C GR A L +M++K VP++ +YNSL+S L E L EM+ D
Sbjct: 92 CKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDI 150
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
TY T++ C+ ++ +A+++ ++L + D TY+ L+D L
Sbjct: 151 FTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 48/277 (17%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FR D TY + L +E D+ +M+ + S YN++I F K+ A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAF--LSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+ + + M + + P + +Y L F L+R + Y L QM G+
Sbjct: 241 MNLLERMAETGS---SPDVVTYTTLMNGFCKLARLDDAYD----------LLNQMTRKGL 287
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQM------GVVYNY------------------ 286
PD+ + S++ G N ++DA+ I +M VY Y
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARK 347
Query: 287 --------LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
PN S++ +I GLC R+ A EL +E +R+ P Y +++ L
Sbjct: 348 FMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCRE 407
Query: 339 GEVEETVKNLWEMIEKQRPV-DFITYRTVLDEICRRG 374
+V+E + +M+E+ + + ITY T++ +C G
Sbjct: 408 KKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAG 444
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 102/224 (45%), Gaps = 13/224 (5%)
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
M+AT S Y ++I + ++L +A+ M S+ P + +Y + A
Sbjct: 1 MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMV-SKGFH--PDVYTYTAVIHALC 57
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV 282
+ + R ++M N + P++ + +I G V++A+ + +M
Sbjct: 58 VENR--------LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR- 108
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+P + +Y+ LI GLC R A +L +EM G +P +Y +L++ + + +
Sbjct: 109 -KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ ++ +++ + D +TY ++D +C+ GR EA+ L +
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 211
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%)
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y LI GLC R + A +M KGF P +Y +++ AL + + E K L EM
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
+ + +TY ++D +C+ GR EA+ LL +++ K + TY L+ L
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGL 125
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTI+ + A +L A K+M ++C P++ S+NI+ +++ M
Sbjct: 329 YNTILDGYCRANQLEEA---RKFMLEE--MDCPPNVVSFNIMIRGLCKVNRSSEA----M 379
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + ++ N PD+ ++I G V++A R++ +M LPNS +Y
Sbjct: 380 ELVEEARRRRCN----PDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYST 435
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GLC G AR + KG VP+ +YN L+ A E+ + L +M+++
Sbjct: 436 LVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 131/299 (43%), Gaps = 46/299 (15%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+++ L A++ + +V+ +M S Y+T+I F + ++ RA + +
Sbjct: 43 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 102
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + P + +Y + GK M+ + ++M G+EPD F+ +
Sbjct: 103 MVTRDGIA--PDVVTYTSVVDGLCRDGK--------MDRACEMVREMKLKGVEPDKFTFS 152
Query: 259 SMIKGYILSNHVNDALRIFHQM---------GVVYNYL---------------------- 287
++I G+ + V++AL+++ ++ V Y L
Sbjct: 153 ALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEG 212
Query: 288 ----PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
PN +Y L+HGLC G A +L M KG VP+ +Y +L+ L +V+
Sbjct: 213 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDA 272
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLL 401
+ EM P D ++Y +LD CR GR EA +L KE+ K+ L D TYT L+
Sbjct: 273 ARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLV 331
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 16/251 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
TY + L AA ++++M AT C + + YN ++ + ++ A +FK
Sbjct: 256 TYTTLIHGLCAAHKVDAARLLMDEMTAT--CCPPDTVSYNALLDGYCRLGRIEEAKQLFK 313
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM-VNDGIEPDIFS 256
M C P +Y L F N +E R L + M GI+PD+ +
Sbjct: 314 EMATK---SCLPDRITYTCLVRGF--------CNASRLEEARFLLENMKTAAGIDPDVVT 362
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
+ ++ GY + +A +M + N PN+ +Y LI GLC GR +A E+ M
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEM-IARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNM 421
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
K PS ++NS++ AL G+++E K L M +TY T+L+ R GR
Sbjct: 422 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRM 481
Query: 377 GEAMKLLKELQ 387
A +L + ++
Sbjct: 482 EIAYELFEVMR 492
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 12/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I+ A K+ A + M + C P SYN L + G+ +
Sbjct: 257 YTTLIHGLCAAHKVDAARLLMDEMTATC---CPPDTVSYNALLDGYCRLGR--------I 305
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + LFK+M PD + +++G+ ++ + +A + M P+ +Y
Sbjct: 306 EEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSI 365
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ G R A E EM + P++ +Y+SL+ L G V+ ++ L M+ K+
Sbjct: 366 VVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKR 425
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
T+ +V+ +CR G EA KLL + L G TYT LL+
Sbjct: 426 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLE 473
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 11/218 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
++ +I + ARK+ A+ ++K + S + +P + +Y L F G +
Sbjct: 151 FSALITGWCNARKVDEALKLYKEILTSSSW--KPDVVTYTALIDGFCKSGN--------L 200
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + M P++ + +S++ G + ++ AL +F +M +PN +Y
Sbjct: 201 EKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM-TSKGCVPNVVTYTT 259
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGLCA + AR L DEM P + SYN+L+ G +EE + EM K
Sbjct: 260 LIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKS 319
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
D ITY ++ C R EA LL+ ++ ID
Sbjct: 320 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGID 357
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+EC+P++ ++ I+ F + + + C F++M + + P+ + N ++ G
Sbjct: 1 MECQPTVVTWTIIIDGFCKANQ-------LKQALAC-FEKM-REFVAPNERTYNVVVNGL 51
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM-KRKGFVP 323
+ + A + +M + P+ +Y +I+G C QG A E+ EM R G P
Sbjct: 52 CKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAP 111
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+Y S+V L +G+++ + + EM K D T+ ++ C + EA+KL
Sbjct: 112 DVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLY 171
Query: 384 KELQNKN--LIDGYTYTKLLD 402
KE+ + D TYT L+D
Sbjct: 172 KEILTSSSWKPDVVTYTALID 192
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 100/247 (40%), Gaps = 24/247 (9%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
CN L+E + + A P D TY I+ AK + E + + +M+A
Sbjct: 334 FCNASRLEEARFLLENMKTAAGIDP----DVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 389
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
+ Y+++I +A ++ A+ V K M N R PS+ ++N + A G
Sbjct: 390 -NVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKR---VEPSVGTFNSVIGALCRLGD 445
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------ 280
M+ L M G+EP + + ++++G+ + + A +F M
Sbjct: 446 --------MDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKK 497
Query: 281 -GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
N +P ++ LI GLC A + +E++ + P+ + ++V L G
Sbjct: 498 SSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAG 556
Query: 340 EVEETVK 346
EE K
Sbjct: 557 RTEEAGK 563
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 113/264 (42%), Gaps = 21/264 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + R A +E ++ M Y+ ++ ++ A++ A
Sbjct: 323 DRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEF 382
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M +RN+ P+ +Y+ L G+ ++H ME + K MVN +EP +
Sbjct: 383 IQEMI-ARNVA--PNAVTYSSLIDGLCKAGR---VDHA-ME----VLKNMVNKRVEPSVG 431
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NS+I +++A ++ M + P +Y L+ G GR + A EL +
Sbjct: 432 TFNSVIGALCRLGDMDEAWKLLVAMAA-HGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 490
Query: 316 MKRK--------GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
M++K VP +++++L+ L E+++ + + E+ ++ ++
Sbjct: 491 MRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIV 549
Query: 368 DEICRRGRAGEAMKLLKELQNKNL 391
D + R GR EA KL+ + L
Sbjct: 550 DGLLRAGRTEEAGKLINSISKVGL 573
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 19/245 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGD--------I 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + G+ P + S N+++ GYI +++ R+ M + P+ ++Y
Sbjct: 153 RVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM-LASGVQPDVYTYSV 211
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM KG VP+ ++ +L+ NG V+ ++ +M+ +
Sbjct: 212 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSI 412
D ITY T++ +C++G +A L+ E+ K L D TYT L+D E D ++
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAF 331
Query: 413 RHHLR 417
H R
Sbjct: 332 EHRKR 336
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 148 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLAS--- 200
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 201 GVQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y + +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 372 MLSVGLKPDARTYTMIIN 389
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A ++ M + + L +P +Y L
Sbjct: 262 EIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM-SVKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
G ++ H K+M+ + I D + ++ G DA ++
Sbjct: 318 IDGCCKEGDLDSAFEHR---------KRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKM 368
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P++ +Y +I+ C +G +L EM+R G VPS
Sbjct: 369 LREMLSV-GLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 415
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 148/343 (43%), Gaps = 79/343 (23%)
Query: 130 QPRFRHDASTYHIMTRKLGAAK----MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
Q R D T++++ AK +++ +++ NQ +P+ Y+ +I +
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQN-CSPNVI----TYSILIDAVCK 171
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM---------- 235
+ +A+ VF MK SR CRP+I +Y + GK+ +++ +
Sbjct: 172 CGGVEKALKVFLDMK-SRG--CRPNIFTYTSMIDGL---GKSGHVDKAFFLFEEMTSEGL 225
Query: 236 --------------------ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
+ LF++M++ G++PD + S++ G ++ ++A R
Sbjct: 226 VATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARR 285
Query: 276 IFHQMGVV--------YNYL--------------------------PNSFSYDYLIHGLC 301
IF + V YN L P+ ++++ L+ GLC
Sbjct: 286 IFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLC 345
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
GR +A L +MKR G P YN+L+ L +G VEE + L EM D +
Sbjct: 346 KSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVV 405
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
TY T++DE C+ GR +A++L +E+ K + TY +L+ L
Sbjct: 406 TYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGL 448
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 28/264 (10%)
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
R AAK+++EM + + +++Y A + S A +F+ +R+
Sbjct: 244 RADAAAKLFREM--------LSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQ---EARD 292
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+ C + YN+L +T ++ +F ++ DG+ PD+++ N+++ G
Sbjct: 293 VGCALDVNLYNVLI--------DTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGL 344
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
S ++DA + M P+ Y+ LI GL GR + A +L EM+ G+ P
Sbjct: 345 CKSGRIHDAFILLGDMKRA-GCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPD 403
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+YN+L+ G +E+ ++ L+E I + + +TY T+L+ +C GR EA KL
Sbjct: 404 VVTYNTLIDESCKGGRIEDALR-LFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFN 462
Query: 385 ELQNKNLIDG------YTYTKLLD 402
++ + +DG TYT LL+
Sbjct: 463 GMKQET-VDGVIDPDFVTYTTLLN 485
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 13/220 (5%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
+A A L ++V K M+ R C + +YN L AF+ G Y + ++
Sbjct: 64 YASAGLLEKSVEALKRMEGHR---CALTASAYNSLIDAFVKAG--------YTQKALAVY 112
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
+ M G+ PD ++ N ++ + + V+ ++F +M N PN +Y LI +C
Sbjct: 113 RVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM-QNQNCSPNVITYSILIDAVCK 171
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
G + A ++ +MK +G P+ +Y S++ L +G V++ EM + +
Sbjct: 172 CGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVV 231
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
Y +++ + R GRA A KL +E+ +K L D T+T L+
Sbjct: 232 YNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLV 271
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 91/166 (54%), Gaps = 1/166 (0%)
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+R F+ +V PD F+ N ++ +++ +++A+ + +MG PN+FSY+ +I
Sbjct: 136 VRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVI 195
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GL G +A +L DEM K VP+ +YN+++ G++E + +M+
Sbjct: 196 AGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLK 255
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ ITY +L +CR GR GE +L E+ ++ ++ DG+TY+ L D
Sbjct: 256 PNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFD 301
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 25/266 (9%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
R D TY+ + LG + E D+V +M E +NT+I + A +L +
Sbjct: 394 IRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVET-FNTLIDAYGRAGQLEKC 452
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ M+ +P++ SY + AF GK +E + L + D + P
Sbjct: 453 FIILSDMQEKG---LKPNVVSYGSIVNAFCKNGK-------ILEAVAILDDMFIKD-VLP 501
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
N++I YI + A + +M GV P+ +Y+ LI GLC Q + A
Sbjct: 502 GAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVP----PSIVTYNLLIKGLCKQSQISEA 557
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVE---ETVKNLWEMIEKQRPVDFITYRTV 366
EL D ++ G P SYN+L+SA + E K +W+ K P TYR +
Sbjct: 558 EELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPR---TYRML 614
Query: 367 LDEICRRGRAGEAMKLLKELQNKNLI 392
+ GR E L +++ +K+++
Sbjct: 615 FSSLGGAGRVHEMENLYQQMLDKDVV 640
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 13/243 (5%)
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
V Q L T +YNT+I + + L A +F+ MK SR + RP +YN L
Sbjct: 350 VLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMK-SRLI--RPDHITYNALIN 406
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
GK I + I +M +G+ P + + N++I Y + + I
Sbjct: 407 GL---GKVERITEAHDLVI-----EMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSD 458
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
M PN SY +++ C G+ A + D+M K +P ++ YN+++ A G
Sbjct: 459 M-QEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECG 517
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYT 398
++ +M P +TY ++ +C++ + EA +LL L+N L D +Y
Sbjct: 518 STDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYN 577
Query: 399 KLL 401
L+
Sbjct: 578 TLI 580
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 32/255 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ A ++ V M + + + P +Y+ILF G + + ++
Sbjct: 261 YNVLLSGLCRAGRMGETAAVLDEMASRKMV---PDGFTYSILFDGHSRTGDSQTMLSLFE 317
Query: 236 ETIR-----------------C----------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
E+++ C + + +VN G+ N++I GY
Sbjct: 318 ESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIG 377
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A IF QM P+ +Y+ LI+GL R A +L EM++ G PS +++
Sbjct: 378 DLEGAFSIFQQMKSRL-IRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETF 436
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+ A G++E+ L +M EK + ++Y ++++ C+ G+ EA+ +L ++
Sbjct: 437 NTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFI 496
Query: 389 KNLIDG-YTYTKLLD 402
K+++ G Y ++D
Sbjct: 497 KDVLPGAQVYNAIID 511
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ SYN++ G + + ++ LF +M + P+ + N+MI G+I
Sbjct: 186 PNAFSYNVVIAGLWKAGTDC-------DAVK-LFDEMPEKAVVPNHITYNTMIDGHIKKG 237
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ R++ QM + + PN +Y+ L+ GLC GR + DEM + VP +Y
Sbjct: 238 DLESGFRLWSQM-LRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTY 296
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ L + G+ + + E ++K + T +L+ +C+ G+ +A ++L+ L N
Sbjct: 297 SILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVN 356
Query: 389 KNLI 392
L+
Sbjct: 357 SGLL 360
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ +YN+L + G+ M + +M + + PD F+ + + G+ +
Sbjct: 255 KPNVITYNVLLSGLCRAGR--------MGETAAVLDEMASRKMVPDGFTYSILFDGHSRT 306
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
L +F + V +++ L++GLC G+ A E+ + G + ++
Sbjct: 307 GDSQTMLSLFEE-SVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVI 365
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN+L++ G++E +M + D ITY +++ + + R EA L+ E++
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425
Query: 388 NKNLIDGY--TYTKLLD 402
KN ++ T+ L+D
Sbjct: 426 -KNGVNPSVETFNTLID 441
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 78/191 (40%), Gaps = 12/191 (6%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN II + E +A + + MK+S PSI +YN+L + + +
Sbjct: 505 VYNAIIDAYIECGSTDQAFMLAEKMKSSG---VPPSIVTYNLLIKGLCKQSQISEAEE-- 559
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
L + N G+ PD+ S N++I ++ + AL + +M P+ +Y
Sbjct: 560 ------LLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKC-GIKPSPRTYR 612
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L L GR L +M K VP S YN +V A A GE + EM +K
Sbjct: 613 MLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDK 672
Query: 355 QRPVDFITYRT 365
V T T
Sbjct: 673 GIAVGDYTSMT 683
>gi|356504195|ref|XP_003520884.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
[Glycine max]
Length = 1114
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 16/270 (5%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q DPL+ E+F+ AS+QP+FRH S+Y I+ KLG +K + + D + + L S T
Sbjct: 69 QSDPLLAKEIFDLASRQPKFRHTYSSYLILLLKLGRSKHFSLL-DDLLRRLKFDSHPITP 127
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
L+ +I +AEA +A+ F + + C+P + N + +S +I
Sbjct: 128 TLFTYLIKVYAEADLPDKALNSFYTI---LHFNCKPLPKHLNRILEVLVSH--RNFIRPA 182
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ LFK G+EPD S N +++ + L+ ++ A +F++M + +P+ SY
Sbjct: 183 FY-----LFKDAHRYGVEPDTKSYNILMRAFCLNGDISVAYSLFNKM-FKRDLVPDIESY 236
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
L+ LC + + A +L ++M KGFVP +LVS L G ++E K + EM+
Sbjct: 237 RILMQALCRKSQVNGAVDLLEDMLNKGFVPD----RTLVSGLCDMGMLDEASKYVEEMLS 292
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
F ++ C GR +A +L
Sbjct: 293 IDFSPHFAVVHALVKGFCNVGRVEDACGVL 322
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA-QGRTKN 308
I P +F+ +IK Y ++ + AL F+ + + +N P + ++ L + + +
Sbjct: 125 ITPTLFTY--LIKVYAEADLPDKALNSFYTI-LHFNCKPLPKHLNRILEVLVSHRNFIRP 181
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L + R G P +KSYN L+ A LNG++ +M ++ D +YR ++
Sbjct: 182 AFYLFKDAHRYGVEPDTKSYNILMRAFCLNGDISVAYSLFNKMFKRDLVPDIESYRILMQ 241
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGYT 396
+CR+ + A+ LL+++ NK + T
Sbjct: 242 ALCRKSQVNGAVDLLEDMLNKGFVPDRT 269
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 35/312 (11%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
++ F WA K+ F+HD++TY + R L + + EM + M+ +P G A ++ I+
Sbjct: 108 IQFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGP-AEWSEIL 166
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR- 239
+A+ +++A+ VF +K + C P+ YN L + G + I+ +Y E
Sbjct: 167 KILGKAKMVNKALSVFYQIKGRK---CNPTATVYNTLILMLMHEGHHEKIHELYNEICSE 223
Query: 240 --C-------------------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
C LF +M +G+ P +++ Y N V
Sbjct: 224 GNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEA 283
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
ALR+ +M P F+Y LI GL GR +A L M + G P N+L+
Sbjct: 284 ALRLVEEMK-GKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLI 342
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR-RGRAGEAMKLLKELQNKNL 391
+ L G +E+ +K +M Q + +TY TV+ I + A EA ++++ +
Sbjct: 343 NILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGI 402
Query: 392 I-DGYTYTKLLD 402
+TY L+D
Sbjct: 403 APSSFTYAILID 414
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 125/316 (39%), Gaps = 48/316 (15%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
EL+N + D TY + G + Y + ++M TE +Y TI+
Sbjct: 215 ELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKEN-GLHPTEKIYTTILA 273
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ + K+ A+ + + MK C P++ +Y L GK ++ Y L
Sbjct: 274 MYFKLNKVEAALRLVEEMKGKG---CAPTVFTYTELIKGL---GKVGRVDDAY-----SL 322
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL------ 287
F M+ DG +PD+ +N++I + + DAL++F +M V YN +
Sbjct: 323 FFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFE 382
Query: 288 ---------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
P+SF+Y LI G C R + A L +EM KGF P
Sbjct: 383 SKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPA 442
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y SL+ +L E + E+ E Y ++ GR +A+ L E+
Sbjct: 443 AYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEM 502
Query: 387 QNKNL-IDGYTYTKLL 401
+ D YTY L+
Sbjct: 503 KKLGCSPDVYTYNALM 518
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA--LYNTIIYFFAEARKLSRAVYV 195
+ Y + LG AK Y+ +++ ++ CG + +Y +I F +LS AV +
Sbjct: 442 AAYCSLIDSLGRAKRYEAANELFQELKEN---CGRSSARVYAVMIKHFGNCGRLSDAVDL 498
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F MK L C P + +YN L + + G ++ L + M +G PDI
Sbjct: 499 FCEMKK---LGCSPDVYTYNALMSGMIRAG--------MIDEAHSLMRNMRENGCTPDIK 547
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N ++ G + A+ +F +M +P++ SY+ ++ L G + A +L E
Sbjct: 548 SHNIILNGLAKTGGPKRAIEMFTKMK-ESEIMPDAVSYNTILSCLSRAGMFEMAAKLMRE 606
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEE 343
MK KGF S +Y+S++ A+ G+V+E
Sbjct: 607 MKLKGFEYDSITYSSILEAV---GKVDE 631
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
MIK + ++DA+ +F +M + P+ ++Y+ L+ G+ G A L M+
Sbjct: 482 MIKHFGNCGRLSDAVDLFCEMKKL-GCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMREN 540
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G P KS+N +++ LA G + ++ +M E + D ++Y T+L + R G A
Sbjct: 541 GCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMA 600
Query: 380 MKLLKELQNKNL-IDGYTYTKLLDVL 404
KL++E++ K D TY+ +L+ +
Sbjct: 601 AKLMREMKLKGFEYDSITYSSILEAV 626
>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 457
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 138/283 (48%), Gaps = 19/283 (6%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT---PSFCGTEALYNTIIYFFAE 185
K+ D +Y+ ++ + Q+ D+ ++ML + P YN +++ +
Sbjct: 69 KEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWS----YNILMHCYFR 124
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
K A VF+ + E PS+ SYN++ KN Y+N+ M LF+ +
Sbjct: 125 LGKPEEANGVFRDIFERG--EIYPSMASYNVMINGLC---KNGYVNNALM-----LFRNL 174
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
G P++ + N+MI G + + DA R+ ++ + + PN+ +Y ++ GR
Sbjct: 175 RRRGFVPEVLTYNAMINGLCKARRLADARRVLNEF-CDFGFEPNAITYTTVMKCCFRCGR 233
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
+ E+ EM+RKGF +Y ++V+AL G +EE + +M+ D +Y T
Sbjct: 234 LEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSNGLVPDLASYNT 293
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
+++ CR+GR EA++L+ E++ + + D YT+T ++ L D
Sbjct: 294 MINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKD 336
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 18/233 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + + A + MK + P + SYN L S G + +
Sbjct: 45 YNTLIDGYCRFVGIDAAYNILNRMKEA---GINPDVVSYNSL-----SSGA---VRKCLL 93
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL---SNHVNDALRIFHQMGVVYNYLPNSFS 292
+ LF +M+ GI PD++S N ++ Y N R + G +Y P+ S
Sbjct: 94 QKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIY---PSMAS 150
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ +I+GLC G NA L ++R+GFVP +YN++++ L + + + L E
Sbjct: 151 YNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFC 210
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ + ITY TV+ R GR + +++L E++ K DG+ Y ++ L
Sbjct: 211 DFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAAL 263
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
++M+++G+ PD+ S N+MI + ++ALR+ ++ + +++ +IHGLC
Sbjct: 277 EKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEK-QGMKCDQYTHTIIIHGLCK 335
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
G + A + D M GF + ++NS++ L G++++ VK M K D T
Sbjct: 336 DGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEVK----DSFT 391
Query: 363 YRTVLDEICRRGRAGEAMKLLK----------ELQNKNLIDGYTYTKLL 401
Y ++L +CR + A KLL + +IDG T + L+
Sbjct: 392 YTSLLHNLCRAKKFRIASKLLVASIEDGFQILRATQRAVIDGLTTSGLV 440
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 130/311 (41%), Gaps = 41/311 (13%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTR---KLGAAKMYQEMDDVVNQMLATPSFCGTEALYN 177
L+LF+ Q R D +Y+I+ +LG +E + V + + A YN
Sbjct: 97 LDLFD-EMLQSGIRPDVWSYNILMHCYFRLGKP---EEANGVFRDIFERGEIYPSMASYN 152
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS--------RGKNTY 229
+I + ++ A+ +F+ N R P + +YN + R N +
Sbjct: 153 VMINGLCKNGYVNNALMLFR---NLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEF 209
Query: 230 INH-------VYMETIRCLFK------------QMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ Y ++C F+ +M G D F+ +++ + + +
Sbjct: 210 CDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRI 269
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+A I +M + +P+ SY+ +I+ C QGR A L DE++++G ++
Sbjct: 270 EEADEIAEKM-MSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTI 328
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
++ L +G E K+L M + + + ++LD + G+AG+ K +K +
Sbjct: 329 IIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCL---GKAGDIDKAVKVFDSME 385
Query: 391 LIDGYTYTKLL 401
+ D +TYT LL
Sbjct: 386 VKDSFTYTSLL 396
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
+N I SN + A + G+ P+ +Y+ LI G C A + + M
Sbjct: 10 MNITISTMCKSNQIAKAETVLID-GIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRM 68
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
K G P SYNSL S +++++ EM++ D +Y ++ R G+
Sbjct: 69 KEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKP 128
Query: 377 GEAMKLLKEL 386
EA + +++
Sbjct: 129 EEANGVFRDI 138
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 129/309 (41%), Gaps = 55/309 (17%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F D TY + L E + +M A + Y +I + ++ A
Sbjct: 42 FHPDVYTYTAVIHALCVENRLHEARKFLEEM-ANRNLTPNVVTYTVLIDGLCKGGRVDEA 100
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFL--SRGKNTYINHVYMETIRCLFKQMVNDGI 250
V + M+ +C P+ +YN L + R Y L ++MV G
Sbjct: 101 VALLSKMRK----KCVPTAVTYNSLISGLCKAERASEAYD----------LLEEMVYSGC 146
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
PDIF+ ++I G+ S +DALR+F Q+ V + P+ +Y LI GLC +GR K A
Sbjct: 147 IPDIFTYTTLITGFCKSKKSDDALRVFEQL-VARGFRPDVVTYSCLIDGLCKEGRLKEAI 205
Query: 311 ELCDEMKRKG-FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL-- 367
+L M + G +P++ +YNSL+S G+++E + L M E D +TY T++
Sbjct: 206 DLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNG 265
Query: 368 ---------------------------------DEICRRGRAGEAMKLLKELQNKNLIDG 394
D +CR R +A+ +L E++ K+
Sbjct: 266 FCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPT 325
Query: 395 -YTYTKLLD 402
YTY +LD
Sbjct: 326 VYTYNTILD 334
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 16/251 (6%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYV 195
A TY+ + L A+ E D++ +M+ S C + Y T+I F +++K A+ V
Sbjct: 115 AVTYNSLISGLCKAERASEAYDLLEEMVY--SGCIPDIFTYTTLITGFCKSKKSDDALRV 172
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG-IEPDI 254
F+ + +R RP + +Y+ L G+ E I LF +M+ G P+
Sbjct: 173 FEQLV-ARGF--RPDVVTYSCLIDGLCKEGR-------LKEAID-LFGRMIKSGSCMPNT 221
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ NS+I G+ +++A+ + +M + P+ +Y L++G C R +A +L +
Sbjct: 222 VTYNSLISGFCRMGKMDEAMNLLERMAETGSS-PDVVTYTTLMNGFCKLARLDDAYDLLN 280
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M RKG P ++ SL+ L + + V L EM K TY T+LD CR
Sbjct: 281 QMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRAN 340
Query: 375 RAGEAMKLLKE 385
+ EA K + E
Sbjct: 341 QLEEARKFMLE 351
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+MV+ G PD+++ ++I + N +++A + +M N PN +Y LI GL
Sbjct: 33 FLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMAN-RNLTPNVVTYTVLIDGL 91
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C GR A L +M++K VP++ +YNSL+S L E L EM+ D
Sbjct: 92 CKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDI 150
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
TY T++ C+ ++ +A+++ ++L + D TY+ L+D L
Sbjct: 151 FTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 48/277 (17%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FR D TY + L +E D+ +M+ + S YN++I F K+ A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAF--LSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+ + + M + + P + +Y L F L+R + Y L QM G+
Sbjct: 241 MNLLERMAETGS---SPDVVTYTTLMNGFCKLARLDDAYD----------LLNQMTRKGL 287
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQM------GVVYNY------------------ 286
PD+ + S++ G N ++DA+ I +M VY Y
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARK 347
Query: 287 --------LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
PN S++ +I GLC R+ A EL +E +R+ P Y +++ L
Sbjct: 348 FMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCRE 407
Query: 339 GEVEETVKNLWEMIEKQRPV-DFITYRTVLDEICRRG 374
+V+E + +M+E+ + + ITY T++ +C G
Sbjct: 408 KKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAG 444
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 102/224 (45%), Gaps = 13/224 (5%)
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
M+AT S Y ++I + ++L +A+ M S+ P + +Y + A
Sbjct: 1 MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMV-SKGFH--PDVYTYTAVIHALC 57
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV 282
+ + R ++M N + P++ + +I G V++A+ + +M
Sbjct: 58 VENR--------LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR- 108
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+P + +Y+ LI GLC R A +L +EM G +P +Y +L++ + + +
Sbjct: 109 -KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ ++ +++ + D +TY ++D +C+ GR EA+ L +
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 211
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%)
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y LI GLC R + A +M KGF P +Y +++ AL + + E K L EM
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
+ + +TY ++D +C+ GR EA+ LL +++ K + TY L+ L
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGL 125
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTI+ + A +L A K+M ++C P++ S+NI+ +++ M
Sbjct: 329 YNTILDGYCRANQLEEA---RKFMLEE--MDCPPNVVSFNIMIRGLCKVNRSSEA----M 379
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + ++ N PD+ ++I G V++A R++ +M LPNS +Y
Sbjct: 380 ELVEEARRRRCN----PDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYST 435
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GLC G AR + KG VP+ +YN L+ A E+ + L +M+++
Sbjct: 436 LITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQR 490
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 145/327 (44%), Gaps = 47/327 (14%)
Query: 113 LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT 172
++E P + F W+ KQ ++ H+ Y + L AK + + +++ F T
Sbjct: 128 IREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKF-EFPMT 186
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+ N++I F + + ++V++ MK + P++ +YN L N ++
Sbjct: 187 VSPGNSLIKSFGKLGMVEELLWVWRKMKEN---GIEPTLYTYNFLM--------NGLVSA 235
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMGVVYN---- 285
+++++ +F+ M + I+PD+ + N+MIKGY + A LR+ G+ +
Sbjct: 236 MFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITY 295
Query: 286 -------YLPNSFS--------------------YDYLIHGLCAQGRTKNARELCDEMKR 318
Y + FS + +I GLC +G+ + + M R
Sbjct: 296 MTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIR 355
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG P+ Y L+ A G VE+ ++ L MI++ D +TY V++ +C+ GR E
Sbjct: 356 KGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEE 415
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLDVL 404
AM + + L I+ Y+ L+D L
Sbjct: 416 AMDYFQTCRFNGLAINSMFYSSLIDGL 442
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 126/272 (46%), Gaps = 15/272 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
R + D TY+ M + A Q+ + + +++ T + Y T+I S
Sbjct: 252 RIKPDVVTYNTMIKGYCKAGQTQKALEKL-RVMETKGLEADKITYMTMIQACYADSDFSS 310
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
V +++ M + + L+ P +++++ GK +N Y +F+ M+ G +
Sbjct: 311 CVALYQEM-DEKGLQVPP--HAFSLVIGGLCKEGK---LNEGY-----AVFENMIRKGSK 359
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++ +I GY + V DA+R+ H+M + + P+ +Y +++GLC GR + A +
Sbjct: 360 PNVAIYTVLIDGYAKTGSVEDAIRLLHRM-IDEGFNPDVVTYSVVVNGLCKNGRVEEAMD 418
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ G +S Y+SL+ L G V+E + EM EK D Y ++D
Sbjct: 419 YFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 372 RRGRAGEAMKLLKELQNKNLIDG--YTYTKLL 401
+ G+ EA+ L K ++ + D YTYT L+
Sbjct: 479 KHGKVDEALALFKRMEEEEGCDQTVYTYTILI 510
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 110/278 (39%), Gaps = 58/278 (20%)
Query: 152 MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
+YQEMD+ + L P ++ +I + KL+ VF+ M + +P++
Sbjct: 314 LYQEMDE---KGLQVPPHA-----FSLVIGGLCKEGKLNEGYAVFENMIRKGS---KPNV 362
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
Y +L + G + IR L +M+++G PD+ + + ++ G + V
Sbjct: 363 AIYTVLIDGYAKTGS-------VEDAIR-LLHRMIDEGFNPDVVTYSVVVNGLCKNGRVE 414
Query: 272 DALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+A+ F +N L NS Y LI GL GR A L +EM KG S YN+
Sbjct: 415 EAMDYFQT--CRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 331 LVSALALNGEVEETVK-----------------------------------NLWEM-IEK 354
L+ A +G+V+E + LW+M I+K
Sbjct: 473 LIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDK 532
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
R + +C G+ A K+L EL +I
Sbjct: 533 GITPTAACLRALSTGLCLSGKVARACKILDELAPMGVI 570
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF++M G D + N++I + V++AL +F +M ++Y LI G+
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGM 513
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ R + A +L D M KG P++ +L + L L+G+V K L E+ +D
Sbjct: 514 FKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILD- 572
Query: 361 ITYRTVLDEICRRGRAGEAMKL 382
+++ +C+ GR EA KL
Sbjct: 573 AACEDMINTLCKAGRIKEACKL 594
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG---TEALYNTIIYFFAEARKL 189
F D TY ++ L +E D T F G Y+++I +A ++
Sbjct: 393 FNPDVVTYSVVVNGLCKNGRVEEAMDY----FQTCRFNGLAINSMFYSSLIDGLGKAGRV 448
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND- 248
A +F+ M C YN L AF GK ++ LFK+M +
Sbjct: 449 DEAERLFEEMSEK---GCTRDSYCYNALIDAFTKHGK--------VDEALALFKRMEEEE 497
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G + +++ +I G + +AL+++ M + P + L GLC G+
Sbjct: 498 GCDQTVYTYTILISGMFKEHRNEEALKLWDMM-IDKGITPTAACLRALSTGLCLSGKVAR 556
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A ++ DE+ G + + + +++ L G ++E K + E+ R V +++
Sbjct: 557 ACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 615
Query: 369 EICRRGRAGEAMKLL 383
+ + G+A AMKL+
Sbjct: 616 ALRKVGKADLAMKLM 630
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 121/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVS----FNTLMNGYIKLGDLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K ME LF +M+N+G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MEDANELFDEMLNNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G +E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 108/216 (50%), Gaps = 10/216 (4%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL V+ + + S S+ +NIL +F+ G+ + + +F +
Sbjct: 113 KLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGE--------IRLAQSVFDAITK 164
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G+ P + S N+++ GYI +++ R+ + M P+ ++Y LI+GLC + + +
Sbjct: 165 WGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS-GVQPDVYTYSVLINGLCKESKME 223
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A EL DEM G VP+ ++ +L+ NG V+ ++ +M+ + D ITY T++
Sbjct: 224 DANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+C++G +A L E+ K L D TYT L+D
Sbjct: 284 YGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLID 319
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 79/185 (42%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRI----------------------------------FH 278
DI+ + +I Y+ S + DA+ F+
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFY 124
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
+ + Y Y + + ++ L+H +G + A+ + D + + G PS S+N+L++
Sbjct: 125 EESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M D TY +++ +C+ + +A +L E+ N L+ +G T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTF 244
Query: 398 TKLLD 402
T L+D
Sbjct: 245 TTLID 249
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLS-QSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G ++ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGSCKEG--------HLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G+VPS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 121/247 (48%), Gaps = 18/247 (7%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS L N I KL F+ +KN+ +
Sbjct: 148 KEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI-------KLGDLDEGFR-LKNAMQV 199
Query: 206 E-CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+
Sbjct: 200 SGVQPDVYTYSVLINGLCKESK--------MDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 252 CKNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPD 310
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 385 ELQNKNL 391
E+ N L
Sbjct: 371 EMLNVGL 377
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEET--VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-D 393
G+++E +KN + + +P D TY +++ +C+ + +A L E+ +K L+ +
Sbjct: 183 KLGDLDEGFRLKNAMQ-VSGVQP-DVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPN 240
Query: 394 GYTYTKLLD 402
G T+T L+D
Sbjct: 241 GVTFTTLID 249
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 26/256 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+I ++ AV +F M + P+ ++ IL +G +
Sbjct: 159 FTTLINGLCNEGRIKEAVELFNEMAGR---DAMPNTVTFTILVDVLCKKG--------MV 207
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
RC+F+ M G+EP+I++ N+++ GY L +NDA ++F M V P+ SY
Sbjct: 208 SEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIM-VGKGCAPSVHSYSI 266
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C R A+ L +M K +P++ +YN+L+ L + E + +M
Sbjct: 267 LINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSG 326
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVLE 405
+ TY +LD +C+ G EA+KLL +Q + LI G L+V +
Sbjct: 327 MLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAK 386
Query: 406 D----DFGNSIRHHLR 417
+ F N IR +R
Sbjct: 387 ELFSKLFANGIRPSVR 402
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
+Y I+ ++ E ++ QM + YNT++ A L A +FK
Sbjct: 263 SYSILINGYCKSRRIDEAKALLTQM-SEKELIPNTVTYNTLMQGLCHASSLLEAQELFKK 321
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M +S L P++R+Y+IL G ++E L M +EPDI N
Sbjct: 322 MCSSGML---PNLRTYSILLDGLCKHG--------HLEEALKLLTSMQERKLEPDIVLYN 370
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+I+G ++ + A +F ++ P+ +Y+ +I GL +G + A +L +M+
Sbjct: 371 ILIQGMFIAGKLEVAKELFSKL-FANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMED 429
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
GF+P S SYN ++ N + ++ + EM+ ++ D T++ +LD
Sbjct: 430 DGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ L QM G+ + ++LN +I +H++ A+ + +M P+S ++ L
Sbjct: 104 TVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKM-FKLGIQPDSVTFTTL 162
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I+GLC +GR K A EL +EM + +P++ ++ LV L G V E M EK
Sbjct: 163 INGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGV 222
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLD 402
+ TY +++ C R +A K+ + + K LI+GY ++ +D
Sbjct: 223 EPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRID 278
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 136/332 (40%), Gaps = 44/332 (13%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
LCN ++E +ELFN + + + T+ I+ L M E V M
Sbjct: 166 LCNEGRIKE----AVELFNEMAGRDAMPNTV-TFTILVDVLCKKGMVSEARCVFETMTEK 220
Query: 167 PSFCGTEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
G E YN ++ + +++ A VF+ M C PS+ SY+IL +
Sbjct: 221 ----GVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKG---CAPSVHSYSILINGYCK 273
Query: 224 RGK------------------NTYINHVYMETI---------RCLFKQMVNDGIEPDIFS 256
+ NT + M+ + + LFK+M + G+ P++ +
Sbjct: 274 SRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRT 333
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
+ ++ G H+ +AL++ M P+ Y+ LI G+ G+ + A+EL ++
Sbjct: 334 YSILLDGLCKHGHLEEALKLLTSMQE-RKLEPDIVLYNILIQGMFIAGKLEVAKELFSKL 392
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
G PS ++YN ++ L G +E K +M + D +Y ++ +
Sbjct: 393 FANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDP 452
Query: 377 GEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
A++L+ E+ + D T+ LLD+ D
Sbjct: 453 STAIQLIDEMVGRRFSADSSTFKMLLDLESHD 484
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I+ KL +V M + + P + + N + A G + V
Sbjct: 248 YNSLIHGLC---KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDV-- 302
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
M++ G+EP++ + N+++ G+ L N V+ A+++F M V + + N SY+
Sbjct: 303 ------VDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM-VHKDCVANVISYNT 355
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C A L +EM R+ P++ +YN+L+ L G +++ + EM+ +
Sbjct: 356 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 415
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ D +TYRT+ D +C+ +AM LLK ++ N D YT +LD
Sbjct: 416 QIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILD 463
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + + + + +A+Y+F+ M SR E P+ +YN L G+ +
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEM--SRQ-ELTPNTVTYNTLIHGLCHVGR--------L 401
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF +MV G PD+ + ++ + H++ A+ + + N+ P+ Y
Sbjct: 402 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG-SNWDPDIQIYTT 460
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ G+C G ++AR+L + KG P+ +YN ++ L G + E K EM +
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
+ TY + R A ++LL+E+ + +D T T L+ +L DD
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDD 573
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PS +N L T+ +++ K + T+ L +QM + GI PD+++L +I N
Sbjct: 68 PSTVDFNRLLTS-IAKTK-------HHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLN 119
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V+ A ++ + + P++ ++ LI GLC +G+ A L D+M +GF P+ +Y
Sbjct: 120 RVDFAFSALAKI-LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTY 178
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L++ L G ++ L M + + + + T++D +C+ + EA + E+
Sbjct: 179 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMIT 238
Query: 389 KNL 391
K +
Sbjct: 239 KGI 241
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 22/237 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+I K+ A+++F M +P++ +Y L G +
Sbjct: 143 FTTLIRGLCVEGKIGEALHLFDKMIGEG---FQPNVVTYGTLINGLCKVGNTS------- 192
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
IR L + M +P++ +++I V +A IF +M + PN +Y+
Sbjct: 193 AAIR-LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEM-ITKGISPNIVTYNS 250
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGLC K+ L +EM +P + N++V AL G V E + MI +
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 310
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLD 402
+ +TY ++D C R A+K+ + +K+ LI+GY + +D
Sbjct: 311 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 21/229 (9%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTI 179
LF S+Q + TY+ + L Q+ + ++M+A P Y T+
Sbjct: 372 LFEEMSRQ-ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL----VTYRTL 426
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ + R L +A+ + K ++ S P I+ Y + G+ +E R
Sbjct: 427 SDYLCKNRHLDKAMALLKAIEGSN---WDPDIQIYTTILDGMCRAGE--------LEDAR 475
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
LF + + G++P++++ N MI G + +A ++F +M PN +Y+ + G
Sbjct: 476 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK-NGCSPNDCTYNLITRG 534
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
EL +EM +GF + LV L+ +G ++++VK +
Sbjct: 535 FLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG-LDQSVKQI 582
>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
Length = 478
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 131/271 (48%), Gaps = 19/271 (7%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLAT-PSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
+T ++T +L +A ++++ PS E + ++ F+ + A+++F
Sbjct: 57 ATVSLLTSRLASAGHLPLATSLLSRSRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLF 116
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
+ + +L S RSYN + A ++ H ++ R L M G P +
Sbjct: 117 RSAPS--DLALPHSARSYNAVLAALVA--------HSHLPLARSLLADMRAAGFAPTAAT 166
Query: 257 LNSMIKGYI--LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
N ++K + + H+ DALR+F + P+ SY+ +I GLC +GR A ++
Sbjct: 167 YNVLLKAHCSDAAAHIEDALRLFRNIPK-----PDVCSYNTIIDGLCRRGRLAEALDMFS 221
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM K P+ +Y +++ LA G ++ +K EM + + +TY +++D +C+ G
Sbjct: 222 EMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGG 281
Query: 375 RAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
RA A++LL + + K L + TY+ ++D L
Sbjct: 282 RATSALELLDRMVKEKKLPNTITYSSVIDGL 312
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 129/293 (44%), Gaps = 17/293 (5%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+V+ L P F L + PL L LF A H A +Y+ + L A
Sbjct: 88 SVAALEPPFLG--LLRAFSRTHRPLAALHLFRSAPSDLALPHSARSYNAVLAALVAHSHL 145
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M A F T A YN ++ +A A ++ ++ RN+ +P + S
Sbjct: 146 PLARSLLADMRAA-GFAPTAATYNVLL----KAHCSDAAAHIEDALRLFRNIP-KPDVCS 199
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN + RG+ + +F +MV I P + + ++I +DA
Sbjct: 200 YNTIIDGLCRRGR--------LAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDA 251
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
L+IFH+MG PN +Y LI GLC GR +A EL D M ++ +P++ +Y+S++
Sbjct: 252 LKIFHEMGR-RGVSPNLVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTITYSSVID 310
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L + E ++ L M + R D + ++ +C GRA EA L E+
Sbjct: 311 GLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEM 363
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 17/276 (6%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F+ D +Y I+ G KM + QML +Y+TII + + ++ A
Sbjct: 111 FKLDQVSYAILMN--GLCKMGET--RAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDA 166
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
++ M P++ +++IL A K + L M+ G++P
Sbjct: 167 YRLYSEMIAKGIF---PNVYTFSILVDALCKDRKGKQAMN--------LLAMMMKKGVKP 215
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + +++ GY L N VN AL IF+ M V PN + Y+ +I+GLC + R A L
Sbjct: 216 NVVTYGAIMDGYCLVNQVNKALNIFNVM-VQEGVEPNVWCYNIIINGLCKKKRVDEAMNL 274
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM K P +YN L+ L G++ +++ + EM + VD ITY ++L +C+
Sbjct: 275 FKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCK 334
Query: 373 RGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVLEDD 407
+A+ L+KE++++ + TYT L+D L D
Sbjct: 335 NHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKD 370
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 19/264 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y + L K + + ++M+A F ++ ++ + RK +A+ +
Sbjct: 146 DVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT-FSILVDALCKDRKGKQAMNL 204
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAF-LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
M +P++ +Y + + L N +N +F MV +G+EP++
Sbjct: 205 LAMMMKKG---VKPNVVTYGAIMDGYCLVNQVNKALN---------IFNVMVQEGVEPNV 252
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N +I G V++A+ +F +M P+ +Y+ LI GLC G+ + EL D
Sbjct: 253 WCYNIIINGLCKKKRVDEAMNLFKEMHW-KKINPDVVTYNILIDGLCKLGKISTSLELVD 311
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM+ G +YNSL+ AL N +++ + + E+ ++ + TY T++D +C+ G
Sbjct: 312 EMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDG 371
Query: 375 RAGEAMKLLKELQNKNLIDGYTYT 398
R +A + +E+ L +GY T
Sbjct: 372 RLEDAYVIFQEI----LTEGYHIT 391
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 111/239 (46%), Gaps = 14/239 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y I+ + ++++A+ +F M P++ YNI+ + + +
Sbjct: 220 YGAIMDGYCLVNQVNKALNIFNVMVQEG---VEPNVWCYNIIINGLCKKKR--------V 268
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LFK+M I PD+ + N +I G ++ +L + +M + + + +Y+
Sbjct: 269 DEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTV-DIITYNS 327
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+H LC A L E+K +G P+ +Y +L+ L +G +E+ E++ +
Sbjct: 328 LLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEG 387
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLEDDFGNSIR 413
+ TY +++ +C++G EA+ LL +++ I D +Y ++ L + G +++
Sbjct: 388 YHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEK-GETVK 445
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN II + +++ A+ +FK M + P + +YNIL GK +
Sbjct: 255 YNIIINGLCKKKRVDEAMNLFKEMHWKK---INPDVVTYNILIDGLCKLGK--------I 303
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
T L +M + G DI + NS++ ++H++ A+ + ++ G+ PN +
Sbjct: 304 STSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGI----QPNVCT 359
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC GR ++A + E+ +G+ + +YN +++ L G +E + L M
Sbjct: 360 YTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRME 419
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ D ++Y T++ + +G + KLL
Sbjct: 420 DNACIPDAVSYETIIYALSEKGETVKTNKLL 450
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P I +N + + + INH T LF+Q+ +GI+P I +L ++ Y +
Sbjct: 8 PPILQFNHILASLVK------INH--YPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTG 59
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ I ++ + Y PNS ++ LI G+C G+ A D + GF SY
Sbjct: 60 GITFLFSILTKI-LKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSY 118
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRP-VDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
L++ L GE + +M+ K D + Y T++D +C+ +A +L E+
Sbjct: 119 AILMNGLCKMGETRAAM----QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMI 174
Query: 388 NKNLI-DGYTYTKLLDVLEDD 407
K + + YT++ L+D L D
Sbjct: 175 AKGIFPNVYTFSILVDALCKD 195
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 92/218 (42%), Gaps = 23/218 (10%)
Query: 124 FNWASKQPRFRHDASTYHIMTR---KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
+W P D TY+I+ KLG E+ D + + T YN+++
Sbjct: 278 MHWKKINP----DVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDI----ITYNSLL 329
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ + L +A+ + K +K+ +P++ +Y L G+ +E
Sbjct: 330 HALCKNHHLDQAITLVKEIKDQG---IQPNVCTYTTLIDGLCKDGR--------LEDAYV 378
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F++++ +G +++ N MI G ++AL + +M +P++ SY+ +I+ L
Sbjct: 379 IFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMED-NACIPDAVSYETIIYAL 437
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
+G T +L M +G K ++ + LN
Sbjct: 438 SEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADLN 475
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 48/299 (16%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
TY+I+ R L A +E VV M + C A+ YNT++ F A +L A V
Sbjct: 12 TYNILVRALCARGRLEEAVGVVGDMRG--AGCAPNAVTYNTLVAAFCRAGELDGAERVVS 69
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
M+ N +P++ ++N + G+ ME R +F +MV +G+ PD+ S
Sbjct: 70 LMREEGN--AKPNLVTFNSMVNGLCKAGR--------MEGARKVFDEMVREGLAPDVVSY 119
Query: 258 NSMIKGYILSNHVNDALRIFHQM---GVVYNYLP-------------------------- 288
N+++ GY ++++L +F +M G+V + +
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179
Query: 289 -----NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
N ++ LI G C +G +A +EM++ G PS YN+L++ G ++
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 239
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ + EM K+ D +TY T++ C+ G A +L +++ K ++ D TY+ L+
Sbjct: 240 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +YNIL A +RG+ +E + M G P+ + N+++ + +
Sbjct: 8 PNVYTYNILVRALCARGR--------LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAG 59
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ A R+ M N PN +++ +++GLC GR + AR++ DEM R+G P SY
Sbjct: 60 ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 119
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+S G + E++ EM ++ D +T+ +++ C+ G +A+ L+ +++
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179
Query: 389 KNL-IDGYTYTKLLD 402
+ L ++ T+T L+D
Sbjct: 180 RGLRMNEVTFTALID 194
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 13/230 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E + +I F + L A+ + M R +PS+ YN L + G+
Sbjct: 186 EVTFTALIDGFCKKGFLDDALLAVEEM---RKCGIQPSVVCYNALINGYCKLGR------ 236
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
M+ R L ++M ++PD+ + +++I GY +++ A ++ +M + LP++ +
Sbjct: 237 --MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM-LKKGVLPDAIT 293
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC + R +A EL + M + G P +Y +L+ G VE+ + EMI
Sbjct: 294 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 353
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
K D +TY +++ + + R EA +LL +L +++ + D Y L+
Sbjct: 354 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 403
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 21/238 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ +L AV V M R C P+ +YN L AF G+
Sbjct: 13 YNILVRALCARGRLEEAVGVVGDM---RGAGCAPNAVTYNTLVAAFCRAGELDG-----A 64
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L ++ N +P++ + NSM+ G + + A ++F +M V P+ SY+
Sbjct: 65 ERVVSLMREEGN--AKPNLVTFNSMVNGLCKAGRMEGARKVFDEM-VREGLAPDVVSYNT 121
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C G + + EM ++G VP ++ SL+ A G +E+ V + +M E+
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN----------KNLIDGYTYTKLLDV 403
++ +T+ ++D C++G +A+ ++E++ LI+GY +D+
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 239
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V + PN ++Y+ L+ LCA+GR + A + +M+ G P++ +YN+LV+A GE+
Sbjct: 2 VRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 61
Query: 342 E--ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYT 398
+ E V +L +P + +T+ ++++ +C+ GR A K+ E+ + L D +Y
Sbjct: 62 DGAERVVSLMREEGNAKP-NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 399 KLL 401
LL
Sbjct: 121 TLL 123
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 32/234 (13%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
DA TY + R L K + ++ ML P E Y T+I + + +A
Sbjct: 290 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPD----EFTYTTLIDGHCKEGNVEKA 345
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK----QMVND 248
+ + M L P + +Y++L LS+ T H R LFK V D
Sbjct: 346 LSLHDEMIRKGVL---PDVVTYSVLING-LSKSARTKEAH------RLLFKLYHEDPVPD 395
Query: 249 GIEPDIF----------SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
I+ D S+ +++KG+ + + +A +++ M + N+ + Y LIH
Sbjct: 396 NIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM-LDRNWKLDGSVYSILIH 454
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
G C G + A +M R GF P+S S SLV L G V E + +++
Sbjct: 455 GHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 508
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M R G P+ +YN LV AL G +EE V + +M + +TY T++ CR G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 376 ---AGEAMKLLKELQN 388
A + L++E N
Sbjct: 61 LDGAERVVSLMREEGN 76
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLAS--- 206
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 207 GVQPDVYTYSVLINGLCKESK--------MDGANGLFDEMLVKGLVPNGVTFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A +L DEM KG P
Sbjct: 259 KNGRVDLAMEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 318 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLKPDTGTYTMIVN 395
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY ++ L + + ++ML + T+I + ++ A+ +
Sbjct: 211 DVYTYSVLINGLCKESKMDGANGLFDEMLV-KGLVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+K M + L P + +YN L +G ++ L +M G++PD F
Sbjct: 270 YKQMLSQSLL---PDLITYNTLIYGLCKKGD--------LKQAHDLIDEMSMKGLKPDKF 318
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ ++I G ++ A +M + N + +Y LI GLC +GR+ +A ++ E
Sbjct: 319 TYTTLIDGCCKEGDLDTAFEHRKRM-IQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
M G P + +Y +V+ G+V + K L EM +TY +++
Sbjct: 378 MLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 430
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF-----HQMGVVYN---------------------- 285
DI+ + +I Y+ S + DA+ + H++ V ++
Sbjct: 71 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 286 -------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M+ D TY +++ +C+ + A L E+ K L+ +G T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF 250
Query: 398 TKLLD 402
T L+D
Sbjct: 251 TTLID 255
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 124/265 (46%), Gaps = 48/265 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+TII + + A+ + K M+ C+P++ +YN + + + +
Sbjct: 48 YSTIINGLCKMGNTTMALQLLKKMEEKG---CKPNVVAYNTIIDSLCK-------DRLVT 97
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS----- 290
E + F +MV +GI PD+F+ +S++ G+ VN+A +F QM V N +PN
Sbjct: 98 EAMD-FFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQM-VERNVIPNKVTFTI 155
Query: 291 ------------------------------FSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
++Y+ L+ G C++ + A++L + M RKG
Sbjct: 156 LIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKG 215
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+ +SYN L++ +G ++E L EM K D TY T++ C+ GR EA
Sbjct: 216 CAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQ 275
Query: 381 KLLKELQNKNLIDGY-TYTKLLDVL 404
+LLKE+ + L+ TY+ +LD L
Sbjct: 276 ELLKEMCSYGLLPNLITYSIVLDGL 300
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 116/228 (50%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y++I++ F +++ A +FK M RN+ P+ ++ IL K I+ ++
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVE-RNV--IPNKVTFTILIDGLC---KKRMISEAWL 171
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+F+ M G+EPD+++ N+++ GY + +++A ++F+ M PN SY+
Sbjct: 172 -----VFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDR-KGCAPNVRSYNI 225
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C GR A+ L EM K P +Y++L+ G +E + L EM
Sbjct: 226 LINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYG 285
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ ITY VLD +C+ G EA +LLK +Q + + + YT L++
Sbjct: 286 LLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIE 333
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 90/161 (55%), Gaps = 2/161 (1%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M G++P + + N+++ G + DA+++F +M V + P+ +Y +I+GLC G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEM-VKMGHEPDVITYSTIINGLCKMG 59
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
T A +L +M+ KG P+ +YN+++ +L + V E + EM+++ P D TY
Sbjct: 60 NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
++L C GR EA L K++ +N+I + T+T L+D L
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGL 160
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
L +P++ ++N L + S+ K M+ ++ LF +MV G EPD+ + +++I G
Sbjct: 4 LGLQPTLVTFNTLLSGLCSKAK-------IMDAVK-LFDEMVKMGHEPDVITYSTIINGL 55
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ AL++ +M PN +Y+ +I LC A + EM ++G P
Sbjct: 56 CKMGNTTMALQLLKKMEE-KGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPD 114
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+Y+S++ G V E +M+E+ + +T+ ++D +C++ EA + +
Sbjct: 115 VFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFE 174
Query: 385 ELQNKNL-IDGYTYTKLLD 402
+ K L D YTY L+D
Sbjct: 175 TMTEKGLEPDVYTYNALVD 193
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 46/267 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ + ++ A +F M C P++RSYNIL G+ +
Sbjct: 188 YNALVDGYCSRSQMDEAQKLFNIMDRKG---CAPNVRSYNILINGHCKSGR--------I 236
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYL----- 287
+ + L +M + + PDIF+ +++++G+ +A + +M G++ N +
Sbjct: 237 DEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIV 296
Query: 288 --------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
PN F Y LI G+C G+ + AREL + KG
Sbjct: 297 LDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGI 356
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P+ +Y ++S L G E + EM + TY ++ R G A++
Sbjct: 357 QPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVR 416
Query: 382 LLKELQNKNL-IDGYTYTKLLDVLEDD 407
L++E+ K D T+ L D+ D
Sbjct: 417 LIEEMVGKGFSADSSTFRMLSDLESSD 443
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 145/333 (43%), Gaps = 73/333 (21%)
Query: 111 MTLQEDPLVCLELFNWASKQPRF---------------RHDASTYHIMTRKL-------G 148
+ LQ + L NW K +F R D TY + L
Sbjct: 162 LGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAA 221
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMK-------- 200
AA + ++M++ Q P+ Y+TII + R+++ A+ +F YMK
Sbjct: 222 AAGLLKKMEEAGCQ----PNV----VTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDI 273
Query: 201 ---NS---------------------RNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
NS R+L P I ++N+L GK + V
Sbjct: 274 FTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGV--- 330
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
K M G+EPD+ + +S++ GY L + V +A ++F M + P+ FSY+ L
Sbjct: 331 -----LKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM-ITKGCKPDVFSYNIL 384
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I+G C R A++L +EM +G P++ SYN+L+ L G + E +NL++ +
Sbjct: 385 INGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA-RNLFKNMHTNG 443
Query: 357 PV-DFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ + TY +LD C++G G+A +L + +Q+
Sbjct: 444 NLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQS 476
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 30/303 (9%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYN 177
L++F++ K D TY+ + + L ++E ++N+M + P L +
Sbjct: 258 LDIFSYM-KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVD 316
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
TI + K+S A V K M + P + +Y+ L + R + +
Sbjct: 317 TI----CKEGKVSEAQGVLKTMTE---MGVEPDVVTYSSLMYGYSLRSE--------VVE 361
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
R LF M+ G +PD+FS N +I GY +++A ++F++M + PN+ SY+ LI
Sbjct: 362 ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEM-IHQGLTPNNVSYNTLI 420
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
HGLC G + AR L M G +P+ +Y+ L+ G + + M
Sbjct: 421 HGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSK 480
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVLEDD 407
+ + Y ++D +C+ G +A KL EL K L I+G LLD +
Sbjct: 481 PNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEA 540
Query: 408 FGN 410
F N
Sbjct: 541 FRN 543
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + + +++ A +F M + P+ SYN L G +
Sbjct: 381 YNILINGYCKVKRIDEAKQLFNEMIHQ---GLTPNNVSYNTLIHGLCQLGS--------L 429
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
R LFK M +G P++F+ + ++ G+ + A R+F M Y+ PN Y+
Sbjct: 430 REARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSK-PNLVMYNI 488
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI +C G ++AR+L E+ KG P+++ Y ++++ L G ++E ++ M E
Sbjct: 489 LIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG 548
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
P D I+Y ++ A++L+ E+++K I
Sbjct: 549 CPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFI 585
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 16/229 (6%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L R F + L +P+I ++ L GK + + + LF MV
Sbjct: 146 LQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGK-------FAQAME-LFDDMVAR 197
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G PD+++ ++I G A + +M PN +Y +I R
Sbjct: 198 GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEA-GCQPNVVTYSTIIDSHRKDRRVNE 256
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A ++ MK KG P +YNSL+ L + +E L EM D +T+ ++D
Sbjct: 257 ALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVD 316
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDFGNSIRHHL 416
IC+ G+ EA +LK + + D TY+ L+ +G S+R +
Sbjct: 317 TICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLM------YGYSLRSEV 359
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 31/238 (13%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG---------- 225
YNTII + ++L +AV + M+ S C P+ +Y IL G
Sbjct: 13 YNTIINGLCKEKRLEKAVDLLVEMEGSS---CEPNSFTYCILMDGLCKEGRVEEAMRLLG 69
Query: 226 ----KNTYINHVYMETI-------------RCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
K ++ V T+ + LF +M+ GI P++ + +I G+
Sbjct: 70 EMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKG 129
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+A + H M P+ ++Y +I GLC GR + A +L D M KG PS+ +Y
Sbjct: 130 LWREATAVLHTM-TERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTY 188
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
N L++ L G + + K M+EK + ++ ++Y T++ +C G+ EAMKL L
Sbjct: 189 NVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+Y+T+I F L R +F M P++ Y+ L F +G +
Sbjct: 81 VVYSTLISGFCSKGCLDRGKALFDEMLEKG---ISPNVVVYSCLINGFCKKG-------L 130
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ E L M GI+PD+++ MI G AL +F M P++ +Y
Sbjct: 131 WREATAVL-HTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM-TEKGEEPSTVTY 188
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LI+GLC +G +A ++ + M KG SYN+L+ L NG+++E +K ++E
Sbjct: 189 NVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLE 248
Query: 354 KQRPV--DFITYRTVLDEICRRGRAGEAMKL 382
V D IT+ TV+ +C+ GR +A+++
Sbjct: 249 DGNYVEPDVITFNTVIQGLCKEGRLDKAVEI 279
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I KL A+ +F + N P + ++N + G+ +Y
Sbjct: 223 YNTLIMGLCNNGKLDEAMKLFSSLLEDGNY-VEPDVITFNTVIQGLCKEGRLDKAVEIY- 280
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF---HQMGVVYNYLPNSFS 292
M+ G ++F+ + +I YI S ++ A+ ++ H++G+V P+S +
Sbjct: 281 -------DTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLV----PSSTT 329
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y +I G C A+ L MK G P+ YN+L+++L +E+ + EM
Sbjct: 330 YSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMK 389
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
E D I++ ++D + G A +LL ++Q L D YTY+ ++ L
Sbjct: 390 ESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRL 442
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
I PDI S N++I G + A+ + +M + PNSF+Y L+ GLC +GR + A
Sbjct: 6 ILPDIVSYNTIINGLCKEKRLEKAVDLLVEM-EGSSCEPNSFTYCILMDGLCKEGRVEEA 64
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
L EMKRKG Y++L+S G ++ EM+EK + + Y +++
Sbjct: 65 MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLING 124
Query: 370 ICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
C++G EA +L + + + D YTYT ++ L D
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKD 163
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I F + L+ A +F MK S P++ YN L + +
Sbjct: 330 YSVMIDGFCKMHMLNFAKGLFSRMKISG---LSPTLFDYNTLMASLCKESS--------L 378
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMGVVYNYLPNSFS 292
E R LF++M EPD S N MI G + + ++ A L QMG+ P++++
Sbjct: 379 EQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLT----PDAYT 434
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y I+ L G+ + A+ D M G P + Y+SL+ LN E+EE + L +M
Sbjct: 435 YSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMA 494
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ +D ++L +C M+LL
Sbjct: 495 DMGVILDLEITNSILTFLCNSAEHLHVMELL 525
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
N LP+ SY+ +I+GLC + R + A +L EM+ P+S +Y L+ L G VEE
Sbjct: 5 NILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEA 64
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
++ L EM K VD + Y T++ C +G L E+ K +
Sbjct: 65 MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGI 111
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 130/287 (45%), Gaps = 18/287 (6%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRF-RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA 165
LCN L E ++LF+ + + D T++ + + L + ++ + M+
Sbjct: 230 LCNNGKLDE----AMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIE 285
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
SF G + +I + ++ + +A+ ++K + L PS +Y+++ F
Sbjct: 286 RGSF-GNLFTCHILIGEYIKSGIIDKAMELWKRV---HKLGLVPSSTTYSVMIDGFC--- 338
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
K +N + LF +M G+ P +F N+++ + + A R+F +M N
Sbjct: 339 KMHMLNFA-----KGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKE-SN 392
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P++ S++ +I G G +A+EL ++M++ G P + +Y+S ++ L+ G++EE
Sbjct: 393 CEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAK 452
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
MI D Y +++ E + LL+++ + +I
Sbjct: 453 GAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVI 499
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
MKR +P SYN++++ L +E+ V L EM + TY ++D +C+ GR
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLL 401
EAM+LL E++ K L +D Y+ L+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLI 87
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 135 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLASG-- 188
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 189 -VQPDVYTYSVLINGLCKESK--------MDGANGLFDEMLVKGLVPNGVTFTTLIDGHC 239
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A +L DEM KG P
Sbjct: 240 KNGRVDLAMEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 298
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 299 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 358
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 359 MLSVGLKPDTGTYTMIVN 376
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY ++ L + + ++ML + T+I + ++ A+ +
Sbjct: 192 DVYTYSVLINGLCKESKMDGANGLFDEMLV-KGLVPNGVTFTTLIDGHCKNGRVDLAMEI 250
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+K M + L P + +YN L +G ++ L +M G++PD F
Sbjct: 251 YKQMLSQSLL---PDLITYNTLIYGLCKKGD--------LKQAHDLIDEMSMKGLKPDKF 299
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ ++I G ++ A +M + N + +Y LI GLC +GR+ +A ++ E
Sbjct: 300 TYTTLIDGCCKEGDLDTAFEHRKRM-IQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 358
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
M G P + +Y +V+ G+V + K L EM +TY +++
Sbjct: 359 MLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 411
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF-----HQMGVVYN---------------------- 285
DI+ + +I Y+ S + DA+ + H++ V ++
Sbjct: 52 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 111
Query: 286 -------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 171
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M+ D TY +++ +C+ + A L E+ K L+ +G T+
Sbjct: 172 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF 231
Query: 398 TKLLD 402
T L+D
Sbjct: 232 TTLID 236
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 107/196 (54%), Gaps = 10/196 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+ +
Sbjct: 207 QPDVYTYSVLINGLCKESK--------MDDANELFDEMLDKGLVPNGVTFTTLIDGHCKN 258
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ A+ ++ QM + + P+ +Y+ LI+GLC +G K A++L DEM+ KG P S
Sbjct: 259 GRVDLAMEVYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKIS 317
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L+ G++E ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E+
Sbjct: 318 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREML 377
Query: 388 NKNL-IDGYTYTKLLD 402
+ L D TYT +++
Sbjct: 378 SVGLRPDTGTYTMIIN 393
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 58/230 (25%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 105 FDTCRKVLEHLMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGD--------I 156
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI---FHQMGVVYNYLPNSFS 292
+F + G+ P + S N+++ GYI +++ R+ H GV P+ ++
Sbjct: 157 RVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQ----PDVYT 212
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+GLC + + +A EL DEM KG VP NG
Sbjct: 213 YSVLINGLCKESKMDDANELFDEMLDKGLVP--------------NG------------- 245
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+T+ T++D C+ GR AM++ K++ +++L D TY L+
Sbjct: 246 --------VTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLI 287
>gi|357124808|ref|XP_003564089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Brachypodium distachyon]
Length = 502
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 116/238 (48%), Gaps = 14/238 (5%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
+ + ++ D N+ L TP+ C +YN +I + + A V M+ + RP
Sbjct: 169 SDLIADLRDPRNKYLPTPNTC----VYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRP 224
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN-DGIEPDIFSLNSMIKGYILSN 268
++ +Y+ L GK M+ LF++M+ D I PD + N +I G+
Sbjct: 225 NLVTYSTLIGGLCRAGK--------MKEAFELFEEMIEKDHIVPDQLTYNVIINGFCRLG 276
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V+ A IF M PN+F+Y L++G +G +N R + +EMK G P + SY
Sbjct: 277 QVDKARTIFGFMRK-NECEPNAFNYATLMNGHSRKGELENLRMVFEEMKSAGVEPDAVSY 335
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+L+ L +G V+E + + EM EK D +TY +++ +C+ R EAM LL+ L
Sbjct: 336 TALIGCLCRHGSVDEGIDLVREMREKGCKADVVTYNLLIEGLCKDKRMVEAMDLLRSL 393
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 19/278 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R + TY + L A +E ++ +M+ + YN II F ++ +A
Sbjct: 223 RPNLVTYSTLIGGLCRAGKMKEAFELFEEMIEKDHIVPDQLTYNVIINGFCRLGQVDKAR 282
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F +M+ + EC P+ +Y L +G+ +E +R +F++M + G+EPD
Sbjct: 283 TIFGFMRKN---ECEPNAFNYATLMNGHSRKGE--------LENLRMVFEEMKSAGVEPD 331
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
S ++I V++ + + +M G + + +Y+ LI GLC R A
Sbjct: 332 AVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADVV----TYNLLIEGLCKDKRMVEAM 387
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+L + +G + SY ++++L G++E+ V L M+ + + +L +
Sbjct: 388 DLLRSLPLEGVQLNVASYRIVMNSLCSCGDMEKAVGLLGLMLGRGFLPHYAASNDLLIGL 447
Query: 371 CRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
C GR +A L L + D + KL++ + D
Sbjct: 448 CGVGRVADATVALYGLASVGFKPDTSCWGKLVEAVCRD 485
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
D L+ C + +L D + P++ YN L+ NG+ E + L EM E
Sbjct: 157 DRLVSSRCPDVLSDLIADLRDPRNKYLPTPNTCVYNILIKHYVKNGDSETAFRVLDEMRE 216
Query: 354 ----KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLD 402
RP + +TY T++ +CR G+ EA +L +E+ K+ I D TY +++
Sbjct: 217 YTCGDVRP-NLVTYSTLIGGLCRAGKMKEAFELFEEMIEKDHIVPDQLTYNVIIN 270
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 19/245 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 88 FDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGD--------I 139
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + G+ P + S N+++ GYI +++ R+ M + P+ ++Y
Sbjct: 140 RVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM-LASGVQPDVYTYSV 198
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM KG VP+ ++ +L+ NG V+ ++ +M+ +
Sbjct: 199 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 258
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSI 412
D ITY T++ +C++G +A L+ E+ K L D TYT L+D E D ++
Sbjct: 259 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAF 318
Query: 413 RHHLR 417
H R
Sbjct: 319 EHRKR 323
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 135 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLASG-- 188
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 189 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLVPNGVTFTTLIDGHC 239
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A L DEM K P
Sbjct: 240 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDK 298
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 299 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 358
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ N L D TYT +++
Sbjct: 359 MLNVGLKPDSRTYTMIIN 376
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 174/401 (43%), Gaps = 57/401 (14%)
Query: 57 LCSCYSAIALSRSSSR--GVGKRSKADSKPALDDTQFRCAVSELPP----RFNNEELCNV 110
+C C + S SSR GV + S+P+ PP R E++ +
Sbjct: 4 VCCCSGVLGGSPPSSRTAGVSSPGLSPSRPSKRRIGRARVQPRAPPPCDERRAAEDVIHA 63
Query: 111 MTLQEDPLVCLELFNWASKQPRFRHDASTYHIM---TRKLGAAKMYQEMDDVVNQMLATP 167
+ + P LE F A+++PR H ++ + M R G E+ DV+ + +
Sbjct: 64 LRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKA 123
Query: 168 SF---------CGTEA----------------------LYNTIIYFFAEARKLSRAVYVF 196
+ G E YN ++YF ++ A+ V+
Sbjct: 124 NVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY 183
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
+ M + PS+R+Y++L AF R +ET+ L ++M G++P+++S
Sbjct: 184 RVMMVDGVV---PSVRTYSVLMVAFGKRRD--------VETVLWLLREMEAHGVKPNVYS 232
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
I+ + ++A RI +M P+ ++ LI LC GR +A+++ +M
Sbjct: 233 YTICIRVLGQAKRFDEAYRILAKM-ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 291
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD-FITYRTVLDEICRRGR 375
K+ P +Y +L+ NG+ ++V +W ++ D + Y V+D +C+ GR
Sbjct: 292 KKSDQKPDRVTYITLLDKFGDNGD-SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 350
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLD--VLEDDFGNSIR 413
EA+++ E++ K ++ + Y+Y L+ + D FG+++
Sbjct: 351 VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALE 391
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 42/264 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+++ +G + +EM V +M + T YNTII ++R+L +A+ +
Sbjct: 789 DEFTYNLLLDAMGKSMRIEEMLKVQEEM-HRKGYESTYVTYNTIISGLVKSRRLEQAIDL 847
Query: 196 F-------------------------KYMKNSRNL-------ECRPSIRSYNILFTAFLS 223
+ ++++ NL C+ + YNIL
Sbjct: 848 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 907
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
G + H LF+ MV+ GI PDI S +I + +ND L F Q+ +
Sbjct: 908 AGNTEKVCH--------LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQL-LE 958
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
P+ +Y+ LI GL R + A L +EM++KG VP+ +YNSL+ L G+ E
Sbjct: 959 MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1018
Query: 344 TVKNLWEMIEKQRPVDFITYRTVL 367
K E++ K + TY ++
Sbjct: 1019 AGKMYEELLTKGWKPNVFTYNALI 1042
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 134/328 (40%), Gaps = 65/328 (19%)
Query: 126 WASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
W K+ + D TY + K G Q + ++ N M A + Y +I +
Sbjct: 289 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKAD-GYNDNVVAYTAVIDALCQ 347
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------------------N 227
++ A+ +F MK + P SYN L + FL + N
Sbjct: 348 VGRVFEALEMFDEMKQKGIV---PEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 404
Query: 228 TYINHVYM-------ETIRCL--FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
Y + +++ E+I+ + ++ M + GI PD+ + N+++ G S + A R+FH
Sbjct: 405 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 464
Query: 279 Q---MGV-----VY--------------------------NYLPNSFSYDYLIHGLCAQG 304
+ MGV Y N +P+ + + LI L G
Sbjct: 465 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 524
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R A + ++K P+ +YN+L++ L G+V+E + L EM P + ITY
Sbjct: 525 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 584
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLI 392
T+LD +C+ G +A+ +L + K I
Sbjct: 585 TILDCLCKNGAVNDALDMLYSMTTKGCI 612
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 70/327 (21%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI-IYFFAEARKLSRAVYVFK 197
+Y I R LG AK + E ++ +M C + + +T+ I +A ++S A VF
Sbjct: 232 SYTICIRVLGQAKRFDEAYRILAKM--ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFW 289
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV---------------YMETIRCL- 241
MK S +P +Y L F G + + + Y I L
Sbjct: 290 KMKKSDQ---KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALC 346
Query: 242 -----------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV-------- 282
F +M GI P+ +S NS+I G++ ++ DAL +F M +
Sbjct: 347 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 406
Query: 283 ----VYNY----------------------LPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
NY +P+ + + ++ GL GR A+ + E+
Sbjct: 407 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 466
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
K G P + +Y ++ + + +E VK ++MIE D + +++D + + GR
Sbjct: 467 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 526
Query: 377 GEAMKLLKELQNKNL--IDGYTYTKLL 401
EA ++ +L+ NL DG TY LL
Sbjct: 527 DEAWRIFYQLKEMNLEPTDG-TYNTLL 552
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 105/220 (47%), Gaps = 13/220 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +++ A++ +L A VF +K + P +Y ++ K + E
Sbjct: 444 NAVLFGLAKSGRLGMAKRVFHELKA---MGVSPDTITYTMMIKCCSKASK-------FDE 493
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
++ +F M+ + PD+ ++NS+I + ++A RIF+Q+ + N P +Y+ L
Sbjct: 494 AVK-IFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM-NLEPTDGTYNTL 551
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ GL +G+ K L +EM + P+ +YN+++ L NG V + + L+ M K
Sbjct: 552 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 611
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
D +Y TV+ + + R EA + +++ K LI Y
Sbjct: 612 IPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYA 650
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 110/259 (42%), Gaps = 38/259 (14%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------- 226
LYN++I + + A +F MK L C P +YN+L A GK
Sbjct: 756 GLYNSLICGLVDENLIDIAEGLFAEMKE---LGCGPDEFTYNLLLDAM---GKSMRIEEM 809
Query: 227 -------------------NTYINHVY----METIRCLFKQMVNDGIEPDIFSLNSMIKG 263
NT I+ + +E L+ +++ G P + ++ G
Sbjct: 810 LKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDG 869
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ + + DA +F++M + Y N Y+ L++G G T+ L +M +G P
Sbjct: 870 LLKAGRIEDAENLFNEM-LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINP 928
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
KSY ++ L G++ + + +++E D ITY ++D + + R EA+ L
Sbjct: 929 DIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLF 988
Query: 384 KELQNKNLIDG-YTYTKLL 401
E+Q K ++ YTY L+
Sbjct: 989 NEMQKKGIVPNLYTYNSLI 1007
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L K+ + G+ NS+I G + N ++ A +F +M + P+ F+Y+ L+ +
Sbjct: 742 LVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL-GCGPDEFTYNLLLDAM 800
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
R + ++ +EM RKG+ + +YN+++S L + +E+ + + ++ +
Sbjct: 801 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 860
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL 386
TY +LD + + GR +A L E+
Sbjct: 861 CTYGPLLDGLLKAGRIEDAENLFNEM 886
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 52/240 (21%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTEALYNTIIYFFAEARKLS 190
F TY + L A ++ +++ N+ML + C +YN ++ A
Sbjct: 856 FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANC---TIYNILLNGHRIAGNTE 912
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVYMETIRCLFKQMVNDG 249
+ ++F+ M + P I+SY I+ G+ N + + F+Q++ G
Sbjct: 913 KVCHLFQDMVDQG---INPDIKSYTIIIDTLCKAGQLNDGLTY---------FRQLLEMG 960
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV-----YNYL-------------- 287
+EPD+ + N +I G S + +A+ +F++M G+V YN L
Sbjct: 961 LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAG 1020
Query: 288 ------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
PN F+Y+ LI G G T +A M G +P+S +Y L + L
Sbjct: 1021 KMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPNQL 1080
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 103/257 (40%), Gaps = 32/257 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKN------SRNLECRPSIRSYNILFTA-------FL 222
YNT+IY + + + A +F MK + PS ++ A FL
Sbjct: 618 YNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 677
Query: 223 SRGKNTYIN--HVYMETI--------RCLFKQMV-NDGIEPDIFSLNSMIKGYILSNHVN 271
G T + H ME I F +++ + GI D F L +IK
Sbjct: 678 QPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKAL 737
Query: 272 DA---LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+A ++ F GV + Y+ LI GL + A L EMK G P +Y
Sbjct: 738 EAHELVKKFKSFGVSL----KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTY 793
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N L+ A+ + +EE +K EM K ++TY T++ + + R +A+ L L +
Sbjct: 794 NLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 853
Query: 389 KNLIDGY-TYTKLLDVL 404
+ TY LLD L
Sbjct: 854 QGFSPTPCTYGPLLDGL 870
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 14/239 (5%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
F E Y T+I + K A+ + + M+ RP++ YN++ G
Sbjct: 156 GFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKG---GVRPNLIMYNMVVDGLCKEG-- 210
Query: 228 TYINHVYMETIRC-LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
+ T C L +MV GI D+F+ NS+I G+ + A+R+ ++M + +
Sbjct: 211 -------LVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDV 263
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
P+ ++++ L+ LC G AR + M ++G P S N+L++ L G + E +
Sbjct: 264 RPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKE 323
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
M+E+ + + I+Y T+++ C+ EA++LL E+ +NL+ D TY LLD L
Sbjct: 324 VFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGL 382
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 21/276 (7%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R + Y+++ L + E + ++M+ C YN++I+ F A + AV
Sbjct: 193 RPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGK-GICIDVFTYNSLIHGFCGAGQFQGAV 251
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ M ++ RP + ++NIL A G + R +F M+ G+EPD
Sbjct: 252 RLLNEMVMKEDV--RPDVYTFNILVDALCKLG--------MVAEARNVFGLMIKRGLEPD 301
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ S N+++ G+ L +++A +F +M V LPN SY LI+G C A L
Sbjct: 302 VVSCNALMNGWCLRGCMSEAKEVFDRM-VERGKLPNVISYSTLINGYCKVKMVDEALRLL 360
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP----VDFITYRTVLDE 369
EM ++ VP + +YN L+ L+ +G V W+++E R D ITY +LD+
Sbjct: 361 TEMHQRNLVPDTVTYNCLLDGLSKSGRVLYE----WDLVEAMRASGQAPDLITYNVLLDD 416
Query: 370 ICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
+R +A+ L + + + + TY L+D L
Sbjct: 417 YLKRECLDKALALFQHIVDTGISPNIRTYNILIDGL 452
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I + + + + A+ + M + RNL P +YN L G+ Y
Sbjct: 340 YSTLINGYCKVKMVDEALRLLTEM-HQRNLV--PDTVTYNCLLDGLSKSGRVLYEWD--- 393
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L + M G PD+ + N ++ Y+ ++ AL +F + V PN +Y+
Sbjct: 394 -----LVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHI-VDTGISPNIRTYNI 447
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC GR K A+E+ + KG P+ ++YN +++ L G ++E L EM++
Sbjct: 448 LIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDG 507
Query: 356 RPVDFITY 363
P + +T+
Sbjct: 508 FPPNAVTF 515
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI-EPDIFSLNSMIKGYILS 267
PSI S N L ++ + + T+ L + + G +P + +L+ I
Sbjct: 53 PSIVSLNKLLSSIMKTK--------HYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHL 104
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ A + ++ V + + F+ L+ GLC +GRT A L D KGF
Sbjct: 105 GQMGLAFSVMAKI-VKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVC 163
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L++ L G+ + ++ L +M + + I Y V+D +C+ G EA L E+
Sbjct: 164 YGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMV 223
Query: 388 NKNL-IDGYTYTKLL 401
K + ID +TY L+
Sbjct: 224 GKGICIDVFTYNSLI 238
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K R +Y + ++ R P + +YN+L +L R ++ LF+ +V+
Sbjct: 384 KSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRE--------CLDKALALFQHIVD 435
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI P+I + N +I G + A IF Q+ V PN +Y+ +I+GL +G
Sbjct: 436 TGISPNIRTYNILIDGLCKGGRMKAAKEIF-QLLSVKGCRPNIRTYNIMINGLRREGLLD 494
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSAL 335
A L EM GF P++ +++ LV AL
Sbjct: 495 EAEALLLEMVDDGFPPNAVTFDPLVRAL 522
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I+ KL +V M + + P + + N + A G + V
Sbjct: 248 YNSLIHGLC---KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDV-- 302
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
M++ G+EP++ + N+++ G+ L N V+ A+++F M V + + N SY+
Sbjct: 303 ------VDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM-VHKDCVANVISYNT 355
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C A L +EM R+ P++ +YN+L+ L G +++ + EM+ +
Sbjct: 356 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 415
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ D +TYRT+ D +C+ +AM LLK ++ N D YT +LD
Sbjct: 416 QIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILD 463
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + + + + +A+Y+F+ M E P+ +YN L G+ +
Sbjct: 353 YNTLINGYCKIQSVDKAMYLFEEMSRQ---ELTPNTVTYNTLIHGLCHVGR--------L 401
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF +MV G PD+ + ++ + H++ A+ + + N+ P+ Y
Sbjct: 402 QDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG-SNWDPDIQIYTT 460
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ G+C G ++AR+L + KG P+ +YN ++ L G + E K EM +
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
+ TY + R A ++LL+E+ + +D T T L+ +L DD
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDD 573
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PS +N L T+ +++ K + T+ L +QM + GI PD+++L +I N
Sbjct: 68 PSTVDFNRLLTS-IAKTK-------HHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLN 119
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V+ A ++ + + P++ ++ LI GLC +G+ A L D+M +GF P+ +Y
Sbjct: 120 RVDFAFSALAKI-LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTY 178
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L++ L G ++ L M + + + + T++D +C+ + EA + E+
Sbjct: 179 GTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMIT 238
Query: 389 KNL 391
K +
Sbjct: 239 KGI 241
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 22/237 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+I K+ A+++F M +P++ +Y L G +
Sbjct: 143 FTTLIRGLCVEGKIGEALHLFDKMIGEG---FQPNVVTYGTLINGLCKVGNTS------- 192
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
IR L + M +P++ +++I V +A IF +M + PN +Y+
Sbjct: 193 AAIR-LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEM-ITKGISPNIVTYNS 250
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGLC K+ L +EM +P + N++V AL G V E + MI +
Sbjct: 251 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 310
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLD 402
+ +TY ++D C R A+K+ + +K+ LI+GY + +D
Sbjct: 311 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 21/229 (9%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTI 179
LF S+Q + TY+ + L Q+ + ++M+A P Y T+
Sbjct: 372 LFEEMSRQ-ELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL----VTYRTL 426
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ + R L +A+ + K ++ S P I+ Y + G+ +E R
Sbjct: 427 SDYLCKNRHLDKAMALLKAIEGSN---WDPDIQIYTTILDGMCRAGE--------LEDAR 475
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
LF + + G++P++++ N MI G + +A ++F +M PN +Y+ + G
Sbjct: 476 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNK-NGCSPNDCTYNLITRG 534
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
EL +EM +GF + LV L+ +G ++++VK +
Sbjct: 535 FLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG-LDQSVKQI 582
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 31/335 (9%)
Query: 74 VGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRF 133
V K S S P + + C +S P+ + N++ ++ L F W S++ F
Sbjct: 51 VSKISTILSSPKWEHSSELCHLS---PKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFF 107
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+HD S + M +L +++ D V M+ + C E + F +E +
Sbjct: 108 KHDMSCFVSMLNRLVRDRLFAPADHVRILMIKS---CRNEGEVKRVTQFLSEIN----SK 160
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
Y F Y ++ S+ T + GK + + R ++ +M+N GI P
Sbjct: 161 YDFGY-----------TLCSFT---TLLIQLGKFDMV-----DLARDMYIKMLNSGIRPS 201
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + N+MI V +A I + Y+ PN+F+Y LI G C A +
Sbjct: 202 LLTFNTMINILCKKGRVQEAKLIMSHI-FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMF 260
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
D M + G P+S +Y++L++ L G +EE + L EM++K TY L +C
Sbjct: 261 DRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDA 320
Query: 374 GRAGEAMKLLKELQNKNLIDGY-TYTKLLDVLEDD 407
G + EA++LL +++ + + T+T L+ L D
Sbjct: 321 GCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 14/264 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + +L ++ + ML+ S T+ YN II F + +A+ +F
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT-YNEIIKCFCLMGDIQKAMVIFDK 437
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + + P++ +YN L + +G + L + M +G++PD ++
Sbjct: 438 MLKAGS---SPNVITYNTLIYGYCKQGN--------LNNAMRLLEIMKGNGLKPDAWTYT 486
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+I G+ + A +F+ M + + PN +Y +I G + +A L +M
Sbjct: 487 ELISGFSRGGKLEHATSLFYGM-MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G +PSS++YN ++S + + E +M+++ + ITY + +D +CR GR G
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL 605
Query: 379 AMKLLKELQNKNLIDG-YTYTKLL 401
A K+ E++ +N YTY+ L+
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLI 629
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+IY + + L+ A+ + + MK + +P +Y L + F GK +
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNG---LKPDAWTYTELISGFSRGGK--------L 498
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF M+ GI P+ + ++I GY V+DAL +F +M V LP+S +Y+
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM-VESGNLPSSQTYNV 557
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G A C +M ++G +P+ +Y S + L NG K EM ++
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617
Query: 356 RPVDFITYRTVLDEICRRGRAGEA 379
+ TY +++ +C+ GRA +A
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDA 641
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 115/227 (50%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I +L A+ + + M + +E P++ +Y I + G ++
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQ-KGIE--PTVYTYTIPLVSLCDAGCSS------- 324
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +M G P+I + ++I G A+ ++H+M + +P + +Y+
Sbjct: 325 EAVE-LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM-LADGLVPTTVTYNA 382
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+ LC +GR + A + M G +PS+++YN ++ L G++++ + +M++
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG 442
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ ITY T++ C++G AM+LL+ ++ L D +TYT+L+
Sbjct: 443 SSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELI 489
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 48/266 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y II + K+ A+ +F M S NL PS ++YN++ + F + N +
Sbjct: 520 YTAIIDGYFNLAKVDDALALFWKMVESGNL---PSSQTYNVMISGF------SKTNSISE 570
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------------- 280
C +MV G+ P++ + S I G + A +IFH+M
Sbjct: 571 AENFC--GKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 281 ------------GVVYNYL---------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
+YN L PN +Y L+ GLC +GR A +L M++K
Sbjct: 629 IYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKK 688
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G PS + Y +L+ N +VE + + M + Y+ ++ +C+ EA
Sbjct: 689 GLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEA 748
Query: 380 MKLLKELQNKNL-IDGYTYTKLLDVL 404
+ + + K+ D +T LLD L
Sbjct: 749 QCIFQTMLEKHWNSDEVVWTVLLDGL 774
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 116/231 (50%), Gaps = 10/231 (4%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
L+NT+I+ ++++L V +F+ MK+ + C P++ +YNI+ L + K
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDN-LCKAKQ------- 354
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++ + L +M N G+ PD+ + ++++ G ++ A + +M P+SF+
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSK-EGVFPDSFTDA 413
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+++ L G+ A + MK +G P +YN+L+ L G ++E + L +M+
Sbjct: 414 SILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAA 473
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ D +Y ++ +CR G+A A + +E+ + ++ D Y LLD L
Sbjct: 474 KCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGL 524
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 127/268 (47%), Gaps = 19/268 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+IM L AK E ++VN+M A Y+ ++ + KL RA + +
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEM-ANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEE 399
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTY-INHVYMETIRCLFKQMVNDGIEPDIFSL 257
M P + + A GK Y ++H +ET++ G PD+ +
Sbjct: 400 MSKEGVF---PDSFTDASILNALSKAGKVDYALSH--LETMK-------ARGSTPDLVTY 447
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+++ G + +++A+ +M V P+ FSY +I LC G+ A + EM
Sbjct: 448 NTLLDGLCKAGRIDEAITFLAKM-VAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
++G +P + Y+SL+ LA NG + ++ L + K DF+ ++ VLD +C+ G+A
Sbjct: 507 KRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKP---DFVMHKMVLDGLCKAGKAE 563
Query: 378 EAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+A ++++ + + D +TY ++ L
Sbjct: 564 DACEVVERMADAGFPADAFTYISVVSGL 591
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 15/275 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
+ LF+W +Q ++H TY+ L A Q + QM + + Y+ ++
Sbjct: 22 VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM-QRRGYPPDDFTYSIVL 80
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+A +L +A + ++ S + ++ +Y+++ K + ++
Sbjct: 81 RGLCKAGELDKAKELLGQLRESG---VKLNVITYSVVIDGCC---KASRVDDALE----- 129
Query: 241 LFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+FK M + G PD+ + NS++KG +++A +F M PN SY L+ G
Sbjct: 130 IFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKA-GCEPNVISYSTLLDG 188
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC GR A L +EM K VP +Y S V+ L V E +M+ K D
Sbjct: 189 LCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKAD 248
Query: 360 FITYRTVLDEICRRGRAGEAM-KLLKELQNKNLID 393
+ + TV+ +C++G A EA ++++ L ++D
Sbjct: 249 AVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLD 283
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ +A ++ A+ M ++ C P + SY I+ TA G+ + +
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAK---CTPDVFSYTIIITALCRSGQAAGAHAI-- 501
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F++MV G+ PD +S++ G + + AL + P+ +
Sbjct: 502 ------FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK----TSLCKPDFVMHKM 551
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
++ GLC G+ ++A E+ + M GF + +Y S+VS L G+V++
Sbjct: 552 VLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKA 600
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++ +R+F +G Y + F+Y+ + L + A E +M+R+G+ P +
Sbjct: 16 GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y+ ++ L GE+++ + L ++ E ++ ITY V+D C+ R +A+++ K +
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135
Query: 388 NKN--LIDGYTYTKLLDVL 404
+ + D T+ LL L
Sbjct: 136 SGGGCVPDVVTFNSLLKGL 154
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 32/245 (13%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---------LSRGKNTY---INH--- 232
K+ AV +F M SR PSI +N L +A +S G+ I+H
Sbjct: 63 KVDDAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 233 VYMETIRC------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
Y I C + +M+ G EPDI +L+S++ GY S ++DA+ + QM
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
V Y P++F++ LIHGL + A L D+M ++G P +Y ++V+ L G+
Sbjct: 180 -VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
++ + L +M + + D + Y T++D +C+ +A+ L E+ NK + D +TY+
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 400 LLDVL 404
L+ L
Sbjct: 299 LISCL 303
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
+ T+I+ K S AV + M C+P + +Y + RG
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQR---GCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 227 --------------NTYINHV----YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
NT I+ + +M+ LF +M N GI PD+F+ +S+I
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+DA R+ M + PN ++ LI +G+ A +L DEM ++ P +Y
Sbjct: 308 RWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 329 NSLVSALALNGEVEETVKNLWE-MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+SL++ ++ ++E K+++E MI K + +TY T++ C+ R E M+L +E+
Sbjct: 367 SSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 388 NKNLI-DGYTYTKLL 401
+ L+ + TYT L+
Sbjct: 426 QRGLVGNTVTYTTLI 440
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 119/254 (46%), Gaps = 21/254 (8%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+Y EM + + + F Y+++I F +L A ++F+ M + +C
Sbjct: 347 AEKLYDEM---IKRSIDPDIFT-----YSSLINGFCMHDRLDEAKHMFELMISK---DCF 395
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +Y+ L F + +E LF++M G+ + + ++I G+ +
Sbjct: 396 PNVVTYSTLIKGFCKAKR--------VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++A +F QM V PN +Y+ L+ GLC G+ A + + ++R P +Y
Sbjct: 448 DCDNAQMVFKQM-VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-Q 387
N ++ + G+VE+ + + K + I Y T++ CR+G EA LLK++ +
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 388 NKNLIDGYTYTKLL 401
+ L + TY L+
Sbjct: 567 DGPLPNSGTYNTLI 580
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 47/244 (19%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + + AK +E ++ +M + G Y T+I+ F +AR A VFK
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + + P+I +YNIL GK + +F+ + +EPDI++ N
Sbjct: 459 MVS---VGVHPNILTYNILLDGLCKNGK--------LAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 259 SMIKGYILSNHVNDALRIFHQMG--------VVYNY------------------------ 286
MI+G + V D +F + + YN
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 287 --LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
LPNS +Y+ LI G + + EL EM+ GF + + LV+ + +G ++++
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS 626
Query: 345 VKNL 348
++
Sbjct: 627 FLDM 630
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 116/231 (50%), Gaps = 10/231 (4%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
L+NT+I+ ++++L V +F+ MK+ + C P++ +YNI+ L + K
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDN-LCKAKQ------- 354
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++ + L +M N G+ PD+ + ++++ G ++ A + +M P+SF+
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSK-EGVFPDSFTDA 413
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+++ L G+ A + MK +G P +YN+L+ L G ++E + L +M+
Sbjct: 414 SILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAA 473
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ D +Y ++ +CR G+A A + +E+ + ++ D Y LLD L
Sbjct: 474 KCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGL 524
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 122/275 (44%), Gaps = 15/275 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
+ LF+W +Q ++H TY+ L A Q + QM + + Y+ ++
Sbjct: 22 VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM-QRRGYPPDDFTYSIVL 80
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+A +L +A + ++ S + ++ +Y+++ K + ++
Sbjct: 81 RGLCKAGELDKAKELLGQLRESG---VKLNVITYSVVIDGCC---KASRVDDALE----- 129
Query: 241 LFKQM-VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+FK M G PD+ + NS++KG +++A +F M PN SY L+ G
Sbjct: 130 IFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKA-GCEPNVISYSTLLDG 188
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC GR A L +EM K VP +Y S V+ L V E +M+ K D
Sbjct: 189 LCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKAD 248
Query: 360 FITYRTVLDEICRRGRAGEAM-KLLKELQNKNLID 393
+ + TV+ +C++G A EA ++++ L ++D
Sbjct: 249 AVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLD 283
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 126/265 (47%), Gaps = 19/265 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+IM L AK E ++VN+M A Y+ ++ + KL RA + +
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEM-ANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEE 399
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTY-INHVYMETIRCLFKQMVNDGIEPDIFSL 257
M P + + A GK Y ++H +ET++ G PD+ +
Sbjct: 400 MSKEGVF---PDSFTDASILNALSKAGKVDYALSH--LETMK-------ARGSTPDLVTY 447
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+++ G + +++A+ +M V P+ FSY +I LC G+ A + EM
Sbjct: 448 NTLLDGLCKAGRIDEAITFLAKM-VAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMV 506
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
++G +P + Y+SL+ LA NG + ++ L + K DF+ ++ V+D +C+ G+A
Sbjct: 507 KRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKP---DFVMHKMVVDGLCKAGKAE 563
Query: 378 EAMKLLKELQNKNL-IDGYTYTKLL 401
+A ++++ + + D +TY ++
Sbjct: 564 DACEVVERMADAGFPADAFTYINVV 588
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ +A ++ A+ M ++ C P + SY I+ TA G+ + +
Sbjct: 447 YNTLLDGLCKAGRIDEAITFLAKMVAAK---CTPDVFSYTIIITALCRSGQAAGAHAI-- 501
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F++MV G+ PD +S++ G + + AL + P+ +
Sbjct: 502 ------FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK----TSLCKPDFVMHKM 551
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
++ GLC G+ ++A E+ + M GF + +Y ++V L G+V++
Sbjct: 552 VVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKA 600
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++ +R+F +G Y + F+Y+ + L + A E +M+R+G+ P +
Sbjct: 16 GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y+ ++ L GE+++ + L ++ E ++ ITY V+D C+ R +A+++ K +
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135
Query: 388 NKN--LIDGYTYTKLLDVL 404
+ D T+ LL L
Sbjct: 136 AGGGCVPDVVTFNSLLKGL 154
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 18/282 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D TY I+ Y++ ++++M A C + + YN ++ + ++ A+
Sbjct: 190 DVVTYTILLEATCKRSGYKQAMKLLDEMRA--KGCAPDIITYNVVVNGICQEGRVDDAI- 246
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+++K+ + C P+ SYNI+ + + E L +M G P++
Sbjct: 247 --EFLKSLPSHGCEPNTVSYNIVLKGLCTAER--------WEDAEKLMAEMSQKGYPPNV 296
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N +I V A+ + Q+ Y PNS SY+ ++H C Q + A +
Sbjct: 297 VTFNMLISFLCRRGLVEPAMEVLDQI-PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 355
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M +G P SYN+L++AL GEV+ V+ L ++ +K I+Y TV+D + + G
Sbjct: 356 LMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 415
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFGNSIR 413
+ EA++LL E+ K L D TY+ + L ED +IR
Sbjct: 416 KTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIR 457
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 4/138 (2%)
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
EPD+ + N+M+ GY ++ ++ A R+ M + P+S++Y+ LI GLC +GRT NA
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADMPME----PDSYTYNTLIRGLCGRGRTGNAL 176
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ D+M R+G VP +Y L+ A ++ +K L EM K D ITY V++ I
Sbjct: 177 VVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGI 236
Query: 371 CRRGRAGEAMKLLKELQN 388
C+ GR +A++ LK L +
Sbjct: 237 CQEGRVDDAIEFLKSLPS 254
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 14/267 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
+Y+I+ + L A+ +++ + ++ +M + + +N +I F + A+ V
Sbjct: 263 SYNIVLKGLCTAERWEDAEKLMAEM-SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQ 321
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+ C P+ SYN + AF + K M+ + MV+ G PDI S N
Sbjct: 322 IPK---YGCTPNSLSYNPILHAFCKQKK--------MDRAMAFVELMVSRGCYPDIVSYN 370
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+++ V+ A+ + HQ+ P SY+ +I GL G+TK A EL +EM
Sbjct: 371 TLLTALCRGGEVDAAVELLHQLKD-KGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVT 429
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG P +Y+++ S L +EE ++ ++ + + + Y +L +C+R
Sbjct: 430 KGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHN 489
Query: 379 AMKL-LKELQNKNLIDGYTYTKLLDVL 404
A+ L + + N + + TYT L++ L
Sbjct: 490 AIDLFIYMISNGCMPNESTYTILIEGL 516
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 131/305 (42%), Gaps = 72/305 (23%)
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF-CGTEAL-YNTIIYFFAEAR 187
Q + + T++++ L + + +V++Q+ P + C +L YN I++ F + +
Sbjct: 289 QKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQI---PKYGCTPNSLSYNPILHAFCKQK 345
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------------------- 226
K+ RA+ + M SR C P I SYN L TA G+
Sbjct: 346 KMDRAMAFVELMV-SRG--CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLI 402
Query: 227 --NTYINHVYM-----ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF-- 277
NT I+ + E + L +MV G++PDI + +++ G + + +A+R F
Sbjct: 403 SYNTVIDGLTKAGKTKEALE-LLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCK 461
Query: 278 -HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
MG+ PN+ Y+ ++ GLC + T NA +L M G +P+ +Y L+ L
Sbjct: 462 VQDMGI----RPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLT 517
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK---NLID 393
G V+E R +L E+C RG K L NK L+D
Sbjct: 518 YEGLVKEA-------------------RELLGELCSRGVVS------KGLINKAAIRLLD 552
Query: 394 GYTYT 398
G T+T
Sbjct: 553 GTTHT 557
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P + +YN + + G+ ++ R L M +EPD ++ N++I+G
Sbjct: 120 CEPDVMAYNAMVAGYCVTGQ--------LDAARRLVADMP---MEPDSYTYNTLIRGLCG 168
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+AL + M + +P+ +Y L+ C + K A +L DEM+ KG P
Sbjct: 169 RGRTGNALVVLDDM-LRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDII 227
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN +V+ + G V++ ++ L + + ++Y VL +C R +A KL+ E+
Sbjct: 228 TYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEM 287
Query: 387 QNKN 390
K
Sbjct: 288 SQKG 291
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 12/147 (8%)
Query: 258 NSMIKGYILSNHVNDALRIFHQM-GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N ++G + + +ALR+ M G+ + P + LI LCA GRT AR +
Sbjct: 63 NDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAA--LIKKLCASGRTAEARRVLAAC 120
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
+ P +YN++V+ + G+++ + + +M P D TY T++ +C RGR
Sbjct: 121 E-----PDVMAYNAMVAGYCVTGQLDAARRLVADM--PMEP-DSYTYNTLIRGLCGRGRT 172
Query: 377 GEAMKLLKELQNKNLI-DGYTYTKLLD 402
G A+ +L ++ + + D TYT LL+
Sbjct: 173 GNALVVLDDMLRRGCVPDVVTYTILLE 199
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 31/335 (9%)
Query: 74 VGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRF 133
V K S S P + + C +S P+ + N++ ++ L F W S++ F
Sbjct: 51 VSKISTILSSPKWEHSSELCHLS---PKLKPHHVVNILQTHKNTDSVLRFFFWISRRKFF 107
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+HD S + M +L +++ D V M+ + C E + F +E +
Sbjct: 108 KHDMSCFVSMLNRLVRDRLFAPADHVRILMIKS---CRNEGEVKRVTQFLSEIN----SK 160
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
Y F Y ++ S+ T + GK + + R ++ +M+N GI P
Sbjct: 161 YDFGY-----------TLCSFT---TLLIQLGKFDMV-----DLARDMYIKMLNSGIRPS 201
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + N+MI V +A I + Y+ PN+F+Y LI G C A +
Sbjct: 202 LLTFNTMINILCKKGRVQEAKLIMSHI-FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMF 260
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
D M + G P+S +Y++L++ L G +EE + L EM++K TY L +C
Sbjct: 261 DRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDA 320
Query: 374 GRAGEAMKLLKELQNKNLIDGY-TYTKLLDVLEDD 407
G + EA++LL +++ + + T+T L+ L D
Sbjct: 321 GCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 14/264 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + +L ++ + ML+ S T+ YN II F + +A+ +F
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT-YNEIIKCFCLMGDIQKAMVIFDK 437
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + + P++ +YN L + +G + L + M +G++PD ++
Sbjct: 438 MLKAGS---SPNVITYNTLIYGYCKQGN--------LNNAMRLLEIMKGNGLKPDAWTYT 486
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+I G+ + A +F+ M + + PN +Y +I G + +A L +M
Sbjct: 487 ELISGFSRGGKLEHATSLFYGM-MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G +PSS++YN ++S + + E +M+++ + ITY + +D +CR GR G
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL 605
Query: 379 AMKLLKELQNKNLIDG-YTYTKLL 401
A K+ E++ +N YTY+ L+
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLI 629
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+IY + + L+ A+ + + MK + +P +Y L + F GK +
Sbjct: 450 YNTLIYGYCKQGNLNNAMRLLEIMKGNG---LKPDAWTYTELISGFSRGGK--------L 498
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF M+ GI P+ + ++I GY V+DAL +F +M V LP+S +Y+
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM-VESGNLPSSQTYNV 557
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G A C +M ++G +P+ +Y S + L NG K EM ++
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617
Query: 356 RPVDFITYRTVLDEICRRGRAGEA 379
+ TY +++ +C+ GRA +A
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDA 641
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 115/227 (50%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I +L A+ + + M + +E P++ +Y I + G ++
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQ-KGIE--PTVYTYTIPLVSLCDAGCSS------- 324
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +M G P+I + ++I G A+ ++H+M + +P + +Y+
Sbjct: 325 EAVE-LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKM-LADGLVPTTVTYNA 382
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+ LC +GR + A + M G +PS+++YN ++ L G++++ + +M++
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAG 442
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ ITY T++ C++G AM+LL+ ++ L D +TYT+L+
Sbjct: 443 SSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELI 489
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 48/266 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y II + K+ A+ +F M S NL PS ++YN++ + F + N +
Sbjct: 520 YTAIIDGYFNLAKVDDALALFWKMVESGNL---PSSQTYNVMISGF------SKTNSISE 570
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------------- 280
C +MV G+ P++ + S I G + A +IFH+M
Sbjct: 571 AENFC--GKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 281 ------------GVVYNYL---------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
+YN L PN +Y L+ GLC +GR A +L M++K
Sbjct: 629 IYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKK 688
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G PS + Y +L+ N +VE + + M + Y+ ++ +C+ EA
Sbjct: 689 GLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEA 748
Query: 380 MKLLKELQNKNL-IDGYTYTKLLDVL 404
+ + + K+ D +T LLD L
Sbjct: 749 QCIFQTMLEKHWNSDEVAWTVLLDGL 774
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 78/195 (40%), Gaps = 10/195 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++IY + + A ++ + + C P++ +Y L G+ +
Sbjct: 625 YSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQ--- 680
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L M G++P +++ G + V AL IF+ M + L S Y
Sbjct: 681 -----LVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLS-DYKA 734
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI LC + + A+ + M K + ++ L+ L GE + +K L M +
Sbjct: 735 LICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRN 794
Query: 356 RPVDFITYRTVLDEI 370
++F TY + E+
Sbjct: 795 CTLNFQTYVMLAREL 809
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 19/245 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 90 FDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGD--------I 141
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + G+ P + S N+++ GYI +++ R+ M + P+ ++Y
Sbjct: 142 RIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM-LASGVQPDVYTYSV 200
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM KG VP+S ++ +L+ NG V+ ++ +M+ +
Sbjct: 201 LINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 260
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSI 412
D ITY T++ +C++G +A L+ E+ K L D TYT L+D + D +
Sbjct: 261 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAF 320
Query: 413 RHHLR 417
H R
Sbjct: 321 EHRKR 325
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 137 KDGDIRIAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLAS--- 189
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K N LF +M+ G+ P+ + ++I G+
Sbjct: 190 GVQPDVYTYSVLINGLCKESKIDDANE--------LFDEMLVKGLVPNSVTFTTLIDGHC 241
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A L DEM KG P
Sbjct: 242 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDK 300
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ +G+++ ++ MI++ +D + Y ++ +CR G + +A K+L+E
Sbjct: 301 ITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLRE 360
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 361 MLSVGLKPDARTYTMIIN 378
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 30/273 (10%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
TY I+ L A+ +++ + N+M A + G LY +I + A + RA V
Sbjct: 248 GTYTILVDSLSTARDISKVEALFNEMKAN-NVVGDVYLYTAVINAYCRAGNMRRAAKVLD 306
Query: 198 YMKNSRNLEC-----RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
EC P+ R+Y +L F G+ ME L M G+
Sbjct: 307 --------ECVGNGVEPNERTYGVLINGFCKIGQ--------MEAAEMLLADMQGQGVGL 350
Query: 253 DIFSLNSMIKGYILSNHVNDALRI---FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ N+MI GY V+DAL+I +MGV + ++Y+ L GLC R A
Sbjct: 351 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDI----YTYNTLACGLCRVNRLDEA 406
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+ L M G VP+ +Y +L+S +G++ E + EM EK +TY ++D
Sbjct: 407 KTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDG 466
Query: 370 ICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
++G EA + KE++ K + D YTY L+
Sbjct: 467 YTKKGSIREAERFRKEMEKKGFVPDVYTYASLV 499
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ + ++ GLC GR +AR L D+M R G ++ YNSL+ + + V+ +
Sbjct: 176 SPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKD-DGRVQEI 234
Query: 349 WEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD---- 402
E++E + TY ++D + + L E++ N++ D Y YT +++
Sbjct: 235 LEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCR 294
Query: 403 ---------VLEDDFGNSIRHHLR 417
VL++ GN + + R
Sbjct: 295 AGNMRRAAKVLDECVGNGVEPNER 318
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 155/348 (44%), Gaps = 67/348 (19%)
Query: 102 FNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVN 161
++E ++M + DP L++FN AS+Q F H+ +TY ++ L K + +D +++
Sbjct: 55 ISHESTVSLMKRERDPQRALDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILH 114
Query: 162 QM-LATPSFCGTEALYNTIIYFFA------EARKLSRAVYVFKYMKNS------------ 202
QM T F E+L+ ++ F+ + ++ + V +K S
Sbjct: 115 QMKYETCRF--QESLFLNLMRHFSRFDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLI 172
Query: 203 ----------------RNLECRPSIRSYNILF----------TAF-----LSRGKNTYIN 231
NL +P+ +NIL +AF + R +Y N
Sbjct: 173 DSGEVDLARKLLLYAKHNLALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPN 232
Query: 232 HV-YMETIRCLFKQ------------MVND-GIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+ Y + CLF Q M++ GI PD N MI G+ S V A I
Sbjct: 233 SITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMIL 292
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
M PN ++Y L++G C +G+ + A+++ DE+K+ G + Y +L++ L
Sbjct: 293 DFMK-KNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCR 351
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
NGE++E +K L EM + D +TY +L + GR+ EA+++L +
Sbjct: 352 NGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQ 399
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 116/245 (47%), Gaps = 12/245 (4%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + L A +E ++ M++ ++N +I F + ++ RA + +
Sbjct: 235 TYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDF 294
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
MK + C P++ +Y+ L F GK ++ + +F ++ G++ D
Sbjct: 295 MKKNG---CNPNVYNYSALMNGFCKEGK--------IQEAKQVFDEVKKTGLKLDTVGYT 343
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+++ + +++A+++ +M ++ +Y+ ++ GL ++GR++ A ++ D+
Sbjct: 344 TLMNCLCRNGEIDEAMKLLGEMKA-SRCRADALTYNVILRGLSSEGRSEEALQMLDQWGC 402
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G + SY +++AL NGE+E+ VK L M ++ T+ ++ +C G
Sbjct: 403 EGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESGNTEI 462
Query: 379 AMKLL 383
+++L
Sbjct: 463 GVRVL 467
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 115/230 (50%), Gaps = 16/230 (6%)
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
++ P+ C ++N ++ + + A V K M+NS+ P++ +Y+ L
Sbjct: 267 LVYKPNVC----IFNILVKYHCRRGDIDSAFEVVKEMRNSK--YSYPNVITYSTLMDGLC 320
Query: 223 SRGKNTYINHVYMETIRCLFKQMVN-DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
G+ ++ LF++MV+ D I PD + N +I G+ + A + M
Sbjct: 321 RNGR--------LKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMK 372
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
PN F+Y L+ GLC G+ ++A+ + EMK G P + +Y SL++ + NG++
Sbjct: 373 N-NGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQI 431
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+E ++ L EM E D +T+ +L +CR GR EA+ ++++L + +
Sbjct: 432 DEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGV 481
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 143/299 (47%), Gaps = 18/299 (6%)
Query: 109 NVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPS 168
N++ ++DP L++FN S+Q F H+ +TY + +KL K +Q +D V++QM T
Sbjct: 138 NLIKREKDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVLHQM--TYE 195
Query: 169 FCG-TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
C E ++ ++ +++ + F ++ + +PS ++ + + +
Sbjct: 196 ACKFHEGVFINLMKHYSKCGFHEKVFDAFLSIQTI--VREKPSPKAISSCLNLLVDSNQV 253
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-GVVYNY 286
+ + + R L +P++ N ++K + ++ A + +M Y+Y
Sbjct: 254 DLVRKLLLYAKRSLV-------YKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSY 306
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG-FVPSSKSYNSLVSALALNGEVEETV 345
PN +Y L+ GLC GR K A EL +EM K VP +YN L++ G+ +
Sbjct: 307 -PNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRA- 364
Query: 346 KNLWEMIEKQRPV-DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+N+ E ++ + Y ++D +C+ G+ +A +L E+++ L D TYT L++
Sbjct: 365 RNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLIN 423
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 117/248 (47%), Gaps = 12/248 (4%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + L +E ++ +M++ YN +I F K RA V ++
Sbjct: 311 TYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEF 370
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
MKN+ C P++ +Y+ L GK ++ + + +M + G++PD +
Sbjct: 371 MKNN---GCCPNVFNYSALVDGLCKAGK--------LQDAKGVLAEMKSSGLKPDAITYT 419
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
S+I + + +++A+ + +M + ++ +++ ++ GLC +GR A ++ +++ +
Sbjct: 420 SLINFFSRNGQIDEAIELLTEMKE-NDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQ 478
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G + SY ++++L N E+ + K L M+ + + T +L +C+ G A +
Sbjct: 479 QGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMAND 538
Query: 379 AMKLLKEL 386
A L +L
Sbjct: 539 AATALFDL 546
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 103/228 (45%), Gaps = 11/228 (4%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T++ +L A +F+ M + + P +YN+L F GK
Sbjct: 312 YSTLMDGLCRNGRLKEAFELFEEMVSKDQI--VPDPLTYNVLINGFCREGK--------A 361
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R + + M N+G P++F+ ++++ G + + DA + +M P++ +Y
Sbjct: 362 DRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKS-SGLKPDAITYTS 420
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+ G+ A EL EMK + ++N ++ L G +E + + ++ ++
Sbjct: 421 LINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQG 480
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDV 403
++ +YR VL+ + + +A KLL + ++ + Y + L V
Sbjct: 481 VYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLV 528
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 138/309 (44%), Gaps = 52/309 (16%)
Query: 133 FRHDAS----TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEAR 187
RH + TY+I+ R L A +E VV M + C A+ YNT++ F A
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRG--AGCAPNAVTYNTLVAAFCRAG 201
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L A V M+ N +P++ ++N + G+ ME R +F +MV
Sbjct: 202 ELDGAERVVSLMREEGN--AKPNLVTFNSMVNGLCKAGR--------MEGARKVFDEMVR 251
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLP---------------- 288
+G+ PD+ S N+++ GY ++++L +F +M G+V + +
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
Query: 289 ---------------NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
N ++ LI G C +G +A +EM++ G PS YN+L++
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 371
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI- 392
G ++ + + EM K+ D +TY T++ C+ G A +L +++ K ++
Sbjct: 372 GYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 431
Query: 393 DGYTYTKLL 401
D TY+ L+
Sbjct: 432 DAITYSSLI 440
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 116/228 (50%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ ++A S ++ +++ P++ +YNIL A +RG+ +
Sbjct: 121 YNAVLLALSDASLPSARRFLSSMLRHG----VAPNVYTYNILVRALCARGR--------L 168
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + M G P+ + N+++ + + ++ A R+ M N PN +++
Sbjct: 169 EEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNS 228
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+++GLC GR + AR++ DEM R+G P SYN+L+S G + E++ EM ++
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D +T+ +++ C+ G +A+ L+ +++ + L ++ T+T L+D
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 13/230 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E + +I F + L A+ + M R +PS+ YN L + G+
Sbjct: 328 EVTFTALIDGFCKKGFLDDALLAVEEM---RKCGIQPSVVCYNALINGYCKLGR------ 378
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
M+ R L ++M ++PD+ + +++I GY +++ A ++ +M + LP++ +
Sbjct: 379 --MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM-LKKGVLPDAIT 435
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC + R +A EL + M + G P +Y +L+ G VE+ + EMI
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
K D +TY +++ + + R EA +LL +L +++ + D Y L+
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 21/238 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ +L AV V M R C P+ +YN L AF G+
Sbjct: 155 YNILVRALCARGRLEEAVGVVGDM---RGAGCAPNAVTYNTLVAAFCRAGELDGA----- 206
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L ++ N +P++ + NSM+ G + + A ++F +M V P+ SY+
Sbjct: 207 ERVVSLMREEGN--AKPNLVTFNSMVNGLCKAGRMEGARKVFDEM-VREGLAPDVVSYNT 263
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C G + + EM ++G VP ++ SL+ A G +E+ V + +M E+
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN----------KNLIDGYTYTKLLDV 403
++ +T+ ++D C++G +A+ ++E++ LI+GY +D+
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 381
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 26/231 (11%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + R L K + ++ ML E Y T+I + + +A+ +
Sbjct: 432 DAITYSSLIRGLCEEKRLNDACELFENMLQL-GVQPDEFTYTTLIDGHCKEGNVEKALSL 490
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK----QMVNDGIE 251
M L P + +Y++L LS+ T H R LFK V D I+
Sbjct: 491 HDEMIRKGVL---PDVVTYSVLING-LSKSARTKEAH------RLLFKLYHEDPVPDNIK 540
Query: 252 PDIF----------SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
D S+ +++KG+ + + +A +++ M + N+ + Y LIHG C
Sbjct: 541 YDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM-LDRNWKLDGSVYSILIHGHC 599
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
G + A +M R GF P+S S SLV L G V E + +++
Sbjct: 600 RGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650
>gi|413950866|gb|AFW83515.1| hypothetical protein ZEAMMB73_465290 [Zea mays]
Length = 478
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 131/271 (48%), Gaps = 19/271 (7%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLAT-PSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
+T ++T +L +A ++++ PS E + ++ F+ + A+++F
Sbjct: 57 ATVSLLTSRLASAGHLPLATSLLSRSRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLF 116
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
+ + +L S RSYN + A + H ++ R L M G P +
Sbjct: 117 RSAPS--DLALPHSARSYNAVLAAL--------VAHSHLPLARSLLADMRAAGFAPTAAT 166
Query: 257 LNSMIKGYI--LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
N ++K + + H+ DALR+F + P+ SY+ +I GLC +GR A ++
Sbjct: 167 YNVLLKAHCSDAAAHIEDALRLFRNIPK-----PDVCSYNTIIDGLCRRGRLAEALDMFS 221
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM K P+ +Y +++ LA G ++ +K EM + + +TY +++D +C+ G
Sbjct: 222 EMVGKCIAPTVVTYTTVIHWLAREGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGG 281
Query: 375 RAGEAMKLL-KELQNKNLIDGYTYTKLLDVL 404
RA A++LL + ++ K L + TY+ ++D L
Sbjct: 282 RATSALELLDRMIKEKKLPNMITYSSVIDGL 312
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 17/293 (5%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+V+ L P F L + PL L LF A H A +Y+ + L A
Sbjct: 88 SVAALEPPFLG--LLRAFSRTHRPLAALHLFRSAPSDLALPHSARSYNAVLAALVAHSHL 145
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M A F T A YN ++ +A A ++ ++ RN+ +P + S
Sbjct: 146 PLARSLLADMRAA-GFAPTAATYNVLL----KAHCSDAAAHIEDALRLFRNIP-KPDVCS 199
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN + RG+ + +F +MV I P + + ++I +DA
Sbjct: 200 YNTIIDGLCRRGR--------LAEALDMFSEMVGKCIAPTVVTYTTVIHWLAREGCFDDA 251
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
L+IFH+MG PN +Y LI GLC GR +A EL D M ++ +P+ +Y+S++
Sbjct: 252 LKIFHEMGR-RGVSPNLVTYSSLIDGLCKGGRATSALELLDRMIKEKKLPNMITYSSVID 310
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L + E ++ L M + R D + ++ +C GRA EA L E+
Sbjct: 311 GLCKEHMLSEAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEM 363
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 137/298 (45%), Gaps = 15/298 (5%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
+C V+ Q D V L F WA +Q R+ H Y+ + L K+ Q V+ M
Sbjct: 166 VCAVLRSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRR 225
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
EA + ++ ++ A KL A+ V M+ + P++ N + K
Sbjct: 226 GIELSPEA-FGCVMVSYSRAGKLRNALRVLTLMQKA---GVEPNLSICNTTIYVLVKGCK 281
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
+E ++M GI+PDI + NS+IKGY N + DAL + +
Sbjct: 282 --------LEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLP-SKGC 332
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+ SY ++ LC + + + + L ++M + +P +YN+L+ L+ +G ++ +
Sbjct: 333 PPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDAL 392
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
L E +K +D + Y ++ C++GR EA L+ ++ +++ D TYT ++D
Sbjct: 393 AFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVD 450
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 131/306 (42%), Gaps = 50/306 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +Y+ + L K +++ ++ +M+ + + YNT+I+ + K A
Sbjct: 335 DKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLS---KHGHADDA 391
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
++K + + Y+ + +F +G+ M+ + L M + PD+
Sbjct: 392 LAFLKEAEDKGFHIDKVGYSAIVHSFCQKGR--------MDEAKSLVIDMYSRSCNPDVV 443
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL--- 312
+ +++ G+ +++A ++ QM + PN+ SY L++GLC G++ ARE+
Sbjct: 444 TYTAIVDGFCRLGRIDEAKKMLQQM-YKHGCKPNTVSYTALLNGLCHSGKSLEAREMINV 502
Query: 313 -----------------------------CD---EMKRKGFVPSSKSYNSLVSALALNGE 340
CD EM KGF P+ N L+ +L N +
Sbjct: 503 SEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQK 562
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE--LQNKNLIDGYTYT 398
V E K L E + K ++ + + TV+ C+ G A+ +L++ L NK+ D TYT
Sbjct: 563 VVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKH-PDAVTYT 621
Query: 399 KLLDVL 404
L D L
Sbjct: 622 ALFDAL 627
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ +Y ++ F GK + L ++MV G P +N +I+ +
Sbjct: 510 PNAITYGVVMHGFRREGK--------LSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 561
Query: 269 HVNDALRIFHQ---MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V +A + + G N + ++ +IHG C G + A + ++M P +
Sbjct: 562 KVVEAKKYLEECLNKGCAINVV----NFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDA 617
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L AL G ++E + + +M+ K +T+R+V+ C+ GR + + LL
Sbjct: 618 VTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDR 677
Query: 386 LQNKNLIDGYTYTKLLDVLEDDFGN 410
+ + Y +++ L DFGN
Sbjct: 678 MVKRKPFR-TIYNHVIEKL-CDFGN 700
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 109/271 (40%), Gaps = 18/271 (6%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
E+ N S++ + +A TY ++ E D+ +M+ F T N +I
Sbjct: 498 EMIN-VSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEK-GFFPTPVEINLLIQ 555
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ +K+ A KY++ N C ++ ++ + F G ME +
Sbjct: 556 SLCQNQKVVEAK---KYLEECLNKGCAINVVNFTTVIHGFCQIGD--------MEAALSV 604
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+ M PD + ++ +++A + +M + P ++ +IH C
Sbjct: 605 LEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKM-LSKGLDPTPVTFRSVIHRYC 663
Query: 302 AQGRTKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
GR + L D M KRK P YN ++ L G +EE K L +++ +D
Sbjct: 664 QWGRVDDMLNLLDRMVKRK---PFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDA 720
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
T +++ ++G A A K+ ++ +NL
Sbjct: 721 NTCHVLMESCLKKGVALSAYKVACQMFRRNL 751
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
R + + M GIE + ++ Y + + +ALR+ M PN + I+
Sbjct: 216 RRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKA-GVEPNLSICNTTIY 274
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
L + + A + M+ G P +YNSL+ +E+ ++ + + K P
Sbjct: 275 VLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPP 334
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLI-DGYTYTKLLDVL 404
D ++Y TV+ +C+ + + L++++ Q+ NLI D TY L+ +L
Sbjct: 335 DKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHML 382
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 19/245 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 107 FDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGD--------I 158
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + G+ P + S N+++ GYI +++ R+ M + P+ ++Y
Sbjct: 159 RJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM-LASGVQPDVYTYSV 217
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM KG VP+ ++ +L+ NG V+ ++ +M+ +
Sbjct: 218 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 277
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSI 412
D ITY T++ +C++G +A L+ E+ K L D TYT L+D E D ++
Sbjct: 278 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAF 337
Query: 413 RHHLR 417
H R
Sbjct: 338 EHRKR 342
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 154 KDGDIRJAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLAS--- 206
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 207 GVQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLVPNGVTFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A L DEM KG P
Sbjct: 259 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLKPDARTYTMIIN 395
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 138/296 (46%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ ++ L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHGAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF + RG+ +M R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YDALFKVIMRRGR-------FMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G C + + A + EMK K P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K
Sbjct: 229 GYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDK 284
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVITYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
Y PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ G
Sbjct: 247 K-GYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCKVG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDII 358
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 23/240 (9%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
PSF E +YN + A+ A+ F++++ S E R ++ L G
Sbjct: 7 VPSF-DHELVYNVL----HGAKNSEHALQFFRWVERSNLFEHN---RETHLKIIEIL--G 56
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
+ + +NH RC+ M G+E D MI Y V +++++F +M GV
Sbjct: 57 RASKLNHA-----RCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGV 111
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
SYD L + +GR A+ ++M +G P+ ++N ++ L+G+VE
Sbjct: 112 ERTIK----SYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVE 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+ +M ++ D ITY T+++ CR + EA K E++ KN+ TYT L+
Sbjct: 168 TANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLI 227
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 121/247 (48%), Gaps = 18/247 (7%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS L N I KL F+ +KN+ +
Sbjct: 148 KEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI-------KLGDLDEGFR-LKNAMQV 199
Query: 206 E-CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+
Sbjct: 200 SGVQPDVYTYSVLINGLCKESK--------MDDANXLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 252 CKNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPD 310
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 385 ELQNKNL 391
E+ N L
Sbjct: 371 EMLNVGL 377
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEET--VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-D 393
G+++E +KN + + +P D TY +++ +C+ + +A L E+ +K L+ +
Sbjct: 183 KLGDLDEGFRLKNAMQ-VSGVQP-DVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPN 240
Query: 394 GYTYTKLLD 402
G T+T L+D
Sbjct: 241 GVTFTTLID 249
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 205 LECR--PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
LEC S+ +NIL F G + + +F + G+ P + S N+++
Sbjct: 116 LECGYPASLYFFNILMHRFCKDGD--------IRVAQSVFDAITKWGLRPSVVSYNTLMN 167
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
GYI +++ R+ M + P+ ++Y LI+GLC + + +A EL DEM KG V
Sbjct: 168 GYIRLGDLDEGFRLKSAM-LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 226
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P+ ++ +L+ NG V+ ++ +M+ + D ITY T++ +C++G +A L
Sbjct: 227 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGL 286
Query: 383 LKELQNKNL-IDGYTYTKLLD--VLEDDFGNSIRHHLR 417
+ E+ K L D +TYT L+D E D + H R
Sbjct: 287 IDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKR 324
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 136 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLASG-- 189
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 190 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLVPNGVTFTTLIDGHC 240
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G A L DEM KG P
Sbjct: 241 KNGRVDLAMEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDK 299
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR +A K+L+E
Sbjct: 300 FTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLRE 359
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 360 MLSVGLKPDTGTYTMIIN 377
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
++KQM++ + PD+ + N++I G +N A + +M + P+ F+Y LI G
Sbjct: 251 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSM-KGLKPDKFTYTTLIDGC 309
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A E M ++ +Y +++S L G + K L EM+ D
Sbjct: 310 CKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDT 369
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGYTYTKLLD 402
TY +++E C++G + KLLKE+Q N ++ TY L++
Sbjct: 370 GTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMN 412
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS L N I KL F+ K +
Sbjct: 152 KEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI-------KLGDLNEXFRLKKAMQAS 204
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+
Sbjct: 205 GVQPDVYTYSVLINGLCKESK--------MDDXNELFDEMLDXGLVPNGVTFTTLIDGHC 256
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 257 KNGRVDLAMEIYKQM-LSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 315
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 316 ITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 375
Query: 386 LQNKNL 391
+ + L
Sbjct: 376 MLSVGL 381
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H C +G + A+ + D + + G PS S+N+L++
Sbjct: 127 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 186
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G++ E + M D TY +++ +C+ + + +L E+ + L+ +G
Sbjct: 187 KLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGV 246
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 247 TFTTLID 253
>gi|242058297|ref|XP_002458294.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
gi|241930269|gb|EES03414.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
Length = 534
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 144/315 (45%), Gaps = 24/315 (7%)
Query: 99 PPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDA-----STYHIMTRKLGAAKMY 153
P + L ++ + DP L +F+ A+ D +T ++T +L +A
Sbjct: 12 PKTLTADHLHRLVRAERDPRRALAIFDAATAASTSAPDPITPSPATVSLLTSRLASAGHL 71
Query: 154 QEMDDVVNQMLAT-PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
++++ PS E + ++ F+ + A+++F+ + +L S R
Sbjct: 72 PLATSLLSRSRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPS--DLALPHSAR 129
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI--LSNHV 270
SYN + A + H ++ R L M G P + N ++K + +
Sbjct: 130 SYNAVLAAL--------VAHSHLPLARSLLADMRAAGFAPTAATYNVLLKAQCSDAAADI 181
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
DALR+F + P+ SY+ +I GLC +GR A E+ EM K P+ +Y +
Sbjct: 182 KDALRLFRNIPK-----PDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTVVTYTT 236
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL-KELQNK 389
L+ LA G ++ +K EM + + +TY +++D +C+ GRA A++L+ + ++ K
Sbjct: 237 LIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEK 296
Query: 390 NLIDGYTYTKLLDVL 404
L + TY+ ++D L
Sbjct: 297 KLPNTITYSSVIDGL 311
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 128/293 (43%), Gaps = 17/293 (5%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+V+ L P F L + PL L LF A H A +Y+ + L A
Sbjct: 87 SVAALEPPFLG--LLRAFSRTHRPLAALHLFRSAPSDLALPHSARSYNAVLAALVAHSHL 144
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M A F T A YN ++ +A+ A + ++ RN+ +P + S
Sbjct: 145 PLARSLLADMRAA-GFAPTAATYNVLL----KAQCSDAAADIKDALRLFRNIP-KPDVCS 198
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN + RG+ + +F +MV I P + + ++I +DA
Sbjct: 199 YNTIIDGLCRRGR--------LAAALEMFSEMVGKCIAPTVVTYTTLIHWLAREGCFDDA 250
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
L+IF +MG PN +Y LI GLC GR +A EL D M ++ +P++ +Y+S++
Sbjct: 251 LKIFDEMGR-RGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEKKLPNTITYSSVID 309
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L + E ++ L M + R D + ++ +C GRA EA L E+
Sbjct: 310 GLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDEM 362
>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 753
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 146/318 (45%), Gaps = 21/318 (6%)
Query: 89 TQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLG 148
T+ + ++ L P F++ + NV+ + L+ F W + F++D T+ + LG
Sbjct: 94 TRLQNSIRNLVPHFDHSLVYNVLHAARNSEHALQFFRWVERAGLFKNDRDTHMKIIEILG 153
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A ++ M E ++ +I + +A + AV +F M L
Sbjct: 154 RASKLNHARCILLDM-PKKGVEWDEYMFVVLIESYGKAGIVQEAVKIFNKMNE---LGVE 209
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
SI+SY+ LF L RG+ YM R +F +M+NDGI+P + N M+ G+ LS
Sbjct: 210 RSIKSYDALFKVILRRGR-------YMMAKR-VFNKMLNDGIQPTRHTYNIMLWGFFLSL 261
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ A+R + M G+ P+ +Y+ +I+G + + A +L EMK K P+
Sbjct: 262 RLETAMRFYDDMKNRGIS----PDVVTYNTMINGFYRFKKMEEAEKLFVEMKGKNIAPTV 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
SY +++ V++ ++ L EM + TY T+L +C + EA +L E
Sbjct: 318 ISYTTMIKGYVAVDRVDDGLRLLEEMKSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILIE 377
Query: 386 LQNKNLI--DGYTYTKLL 401
+ ++L D + +LL
Sbjct: 378 MVARHLAPKDNSIFLRLL 395
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 22/232 (9%)
Query: 157 DDVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSRAV-YVFKYMKNSRNLECRPSIR- 212
+DV+N M L P+ G Y +I F +A + RAV Y+ K ++ L + ++
Sbjct: 408 EDVLNTMMRLHIPTEAGH---YGVLIENFCKAEEYDRAVKYLDKLIEKEIILRPQSTLEI 464
Query: 213 ---SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+YN + S G+ F+Q++ G++ D + N++I G+ +
Sbjct: 465 ESNAYNPMIQYLCSHGQTG--------KAEIFFRQLMKKGVQ-DPLAFNNLICGHAKEGY 515
Query: 270 VNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A IF MG +P ++ +Y +I +G +A+ D M G VP +
Sbjct: 516 PDSAFEIFKIMG--KRGVPRDADAYRLIIESYLRKGEPADAKTALDGMLEDGHVPDPSVF 573
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
S++ +L +G V+ + + M+EK + +L+ + RG EA+
Sbjct: 574 RSVMESLFEDGRVQTASRVMKSMVEKGVKENMDLVGKILEALLMRGHVEEAL 625
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL---RIFHQMGVVYNYLPNSF 291
++T + K MV G++ ++ + +++ ++ HV +AL + Q G N+
Sbjct: 586 VQTASRVMKSMVEKGVKENMDLVGKILEALLMRGHVEEALGRIELLMQSGFHVNF----- 640
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
D L+ L +G+T A +L D + F KSY+ ++ AL G+ L ++
Sbjct: 641 --DDLLSVLSEKGKTIAALKLLDFALERDFNLDFKSYDKVLDALLAAGKTLNAYSILCKI 698
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEA 379
++K D+ + + ++ + + G +A
Sbjct: 699 MQKGGVSDWSSSKDLIKSLNQEGNTKQA 726
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F +A +L A V MK+ L P + +YNI+ +F SRGK +
Sbjct: 141 YNALISGFIKANQLENANRVLDRMKSRGFL---PDVVTYNIMIGSFCSRGK--------L 189
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F++++ D EP + + +I+ IL ++ A+++ +M + P++ +Y+
Sbjct: 190 DLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEM-LSKGLEPDTLTYNA 248
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C + A EL + +G P +YN L+ L G+ E K + EMI
Sbjct: 249 IIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG 308
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ +T+ ++ +CR G+ EA+ LL+ ++ K L D Y Y L+
Sbjct: 309 CKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLI 355
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 31/240 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YN II + + +A F+ +++ + C+P I +YNIL LSRGK
Sbjct: 246 YNAIIRGMCKEMMVDKA---FELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLIS 302
Query: 227 --------NTYINHVYMETIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ H + C L + M G++PD + + +I G+
Sbjct: 303 EMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREG 362
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ A M + LP+ +Y+ ++ GLC G+ A E+ +++ G P+ SY
Sbjct: 363 RLDLATEFLEYM-ISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSY 421
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L SAL +G+ ++ + +++ + D ITY +++ +CR G EA++LL ++Q+
Sbjct: 422 NTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQS 481
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 130/278 (46%), Gaps = 25/278 (8%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI-IYFFAEARKLSRA 192
+ D TY+I+ R L + + E + ++++M++ C + ++I I K+ A
Sbjct: 275 KPDIITYNILLRTLLSRGKWSEGEKLISEMISIG--CKPNVVTHSILIGTLCRDGKVEEA 332
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V + + MK +P Y+ L F G+ ++ + M++DG P
Sbjct: 333 VNLLRSMKEKG---LKPDAYCYDPLIAGFCREGR--------LDLATEFLEYMISDGCLP 381
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
DI + N+++ G + + AL +F ++ V PN SY+ L L + G A E+
Sbjct: 382 DIVNYNTIMAGLCRTGKADQALEVFEKLDEV-GCPPNVSSYNTLFSALWSSGDRYRALEM 440
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++ +G P +YNSL+S L +G V+E ++ L +M + + ++Y +L +C+
Sbjct: 441 ILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCK 500
Query: 373 RGRAGEAMKLLKELQNKN----------LIDGYTYTKL 400
RA +A+++L + K LI+G ++ L
Sbjct: 501 VNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGL 538
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 86/155 (55%), Gaps = 2/155 (1%)
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+PD+F+ N++I G+I +N + +A R+ +M +LP+ +Y+ +I C++G+ A
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKS-RGFLPDVVTYNIMIGSFCSRGKLDLAL 193
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
E+ +E+ + P+ +Y L+ A L+G ++ +K L EM+ K D +TY ++ +
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253
Query: 371 CRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
C+ +A +LL+ L ++ D TY LL L
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTL 288
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY-LPNSFSYDYLIHGLCAQ 303
MV+ G PD+ +IKG+ S ++ A R+ M ++ Y P+ F+Y+ LI G
Sbjct: 95 MVDKGYTPDVILCTKLIKGFFNSRNIGKATRV---MEILERYGKPDVFAYNALISGFIKA 151
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
+ +NA + D MK +GF+P +YN ++ + G+++ ++ E+++ ITY
Sbjct: 152 NQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITY 211
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+++ G AMKLL E+ +K L D TY ++
Sbjct: 212 TILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAII 250
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 116/248 (46%), Gaps = 25/248 (10%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 90 FDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGD--------I 141
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI---FHQMGVVYNYLPNSFS 292
+ +F + G+ P + S N+++ GYI +++ R+ H GV P+ ++
Sbjct: 142 MVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQ----PDVYT 197
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+GLC + + +A E+ DEM KG VP+ ++ +L+ NG V+ ++ +M+
Sbjct: 198 YSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 257
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFG 409
+ D ITY T++ +C++G +A L+ E+ K L D TYT L+D E D
Sbjct: 258 SQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLE 317
Query: 410 NSIRHHLR 417
+ H R
Sbjct: 318 TAFEHRKR 325
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 103/196 (52%), Gaps = 10/196 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + +Y++L K M+ +F +M++ G+ P+ + ++I G+ +
Sbjct: 192 QPDVYTYSVLINGLCKESK--------MDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKN 243
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A +L DEM KG P +
Sbjct: 244 GRVDLAMEIYKQM-LSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 302
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L+ G++E ++ MI++ +D + Y ++ +C+ R +A K+L+E+
Sbjct: 303 YTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREML 362
Query: 388 NKNL-IDGYTYTKLLD 402
+ L D TYT +++
Sbjct: 363 SVGLKPDTGTYTMIIN 378
>gi|242063722|ref|XP_002453150.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
gi|241932981|gb|EES06126.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
Length = 757
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 19/244 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I+ F +K+ AV VF MK P + +YN L A++ G +
Sbjct: 254 YNTLIWGFGLCKKMETAVRVFGEMKGH---GVTPDVTTYNALLNAWVRTGD--------L 302
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E+ R +F +M GIE + S N MIKGY+ N V +A+ +F +MG L + ++
Sbjct: 303 ESARKVFDEMTGKGIERNSVSYNVMIKGYVEGNRVEEAVALFAEMGEKGLRL-SEKTFAA 361
Query: 296 LIHGLC-AQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNGEVEETVKNLWEMIE 353
L+ GLC QGR AR+ D+M + P KS + LV+ L G+++ ++ + +
Sbjct: 362 LMPGLCDDQGRAAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLDGALEVHRKSGQ 421
Query: 354 -KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNSI 412
K VD Y +++ +C G++ A+++L EL K G + VLE N +
Sbjct: 422 FKHVLVDPRQYGVLMEGLCAGGKSEMAIEVLDELMEK----GTLLSPKSPVLEASAYNPV 477
Query: 413 RHHL 416
HL
Sbjct: 478 IEHL 481
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 117/294 (39%), Gaps = 48/294 (16%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
+ L+ F +A ++ FR D T+ ++ L + +M +V + + S E
Sbjct: 127 LALQFFRFAYRRGGFRPDGDTFALLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAA 186
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
+I + A AV +F+ M + L + SYN + A L RG+ +Y
Sbjct: 187 LISAYGRAAIPQEAVKLFRMMPD---LGVPRTALSYNAVLKAILCRGREAMARRIY---- 239
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
M+ DG+ PD+ + N++I G+
Sbjct: 240 ----NAMIADGVAPDVSTYNTLIWGF---------------------------------- 261
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC + T A + EMK G P +YN+L++A G++E K EM K
Sbjct: 262 GLCKKMET--AVRVFGEMKGHGVTPDVTTYNALLNAWVRTGDLESARKVFDEMTGKGIER 319
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDFGNS 411
+ ++Y ++ R EA+ L E+ K L + T+ L+ L DD G +
Sbjct: 320 NSVSYNVMIKGYVEGNRVEEAVALFAEMGEKGLRLSEKTFAALMPGLCDDQGRA 373
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 18/221 (8%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
L + +I A A + A+ F++ R RP ++ +L A SR +NH
Sbjct: 111 LVHGVISGAASAGRAELALQFFRFA--YRRGGFRPDGDTFALLVPALASR---RMLNHA- 164
Query: 235 METIRCL-FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNS 290
RCL M + + PD +L ++I Y + +A+++F M GV L
Sbjct: 165 ----RCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPDLGVPRTAL--- 217
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
SY+ ++ + +GR AR + + M G P +YN+L+ L ++E V+ E
Sbjct: 218 -SYNAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGE 276
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
M D TY +L+ R G A K+ E+ K +
Sbjct: 277 MKGHGVTPDVTTYNALLNAWVRTGDLESARKVFDEMTGKGI 317
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN + S G T F+Q++ G++ D + NS+I+G+
Sbjct: 473 AYNPVIEHLCSNGSTT--------KAETFFRQLMKKGVD-DKAAFNSLIRGHAKEGVPEA 523
Query: 273 ALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
A I M +P + S+ L+ + +A+ D M + G +PS + S+
Sbjct: 524 AQEILAIM--TRREVPTDPESHVLLVDSFLKKNEPADAKTALDSMMQHGHLPSPALFKSV 581
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
+ AL +G ++ + + MIEK + +L+ + RG EA+
Sbjct: 582 MEALFNDGRIQTASRVMKSMIEKGVTENMDMAHKILEALFTRGHVEEAI 630
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 113/287 (39%), Gaps = 28/287 (9%)
Query: 129 KQPRFRH---DASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFCGTEA-LYNTI 179
K +F+H D Y ++ L A + +V++++ L +P EA YN +
Sbjct: 418 KSGQFKHVLVDPRQYGVLMEGLCAGGKSEMAIEVLDELMEKGTLLSPKSPVLEASAYNPV 477
Query: 180 IYFFAEARKLSRAVYVFK-YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
I ++A F+ MK + + ++N L G + E +
Sbjct: 478 IEHLCSNGSTTKAETFFRQLMKKGVDDKA-----AFNSLIRGHAKEG----VPEAAQEIL 528
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+ ++ V E + ++S +K N DA M + + +LP+ + ++
Sbjct: 529 AIMTRREVPTDPESHVLLVDSFLK----KNEPADAKTALDSM-MQHGHLPSPALFKSVME 583
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
L GR + A + M KG + + ++ AL G VEE + + M+E
Sbjct: 584 ALFNDGRIQTASRVMKSMIEKGVTENMDMAHKILEALFTRGHVEEAIGRVNLMVENGCMP 643
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +L +C R EA KL +++ + TY ++L+ L
Sbjct: 644 DL---DKLLVGLCDNDRVMEAQKLADFALDRDFDVSFSTYDRVLEAL 687
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLAS--- 206
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ ++I G+
Sbjct: 207 GVQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLVPNGVIFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K L DEM KG P
Sbjct: 259 KNGRVDLAMEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ +MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ N L D TYT +++
Sbjct: 378 MLNVGLKPDARTYTMIIN 395
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++ G+++E
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ M+ D TY +++ +C+ + +A +L E+ K L+ +G +T L+D
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLID 255
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ F L AV + + M RP+ +YN + S K +
Sbjct: 152 YGTLVDGFCRVGDLDGAVELVRKMTERGY---RPNAITYNNIMHGLCSGRK--------L 200
Query: 236 ETIRCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++ LFK+M G PD+F+ ++++ + S V+DA R+ M V PN +Y
Sbjct: 201 DSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAM-VSKGCSPNVVTYS 259
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+HGLC G+ A L M R G P+ +YN+++ G ++E L EM++
Sbjct: 260 SLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG 319
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+ +TY +LD C+ G+A +A+ L++ + K + +TY LLD+
Sbjct: 320 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 370
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 121/233 (51%), Gaps = 15/233 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
++ +I+ +A + S AV F+ M + C P +YN + K+ ++
Sbjct: 11 GVHKSILRGLCDAGQCSDAVLHFREMSKT----CPPDSVTYNTMINGL---SKSDRLD-- 61
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ IR L ++MV++G P++FS N+++ G+ +N V +AL + QM V+ P+ SY
Sbjct: 62 --DAIR-LLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM-VMRGCPPDVVSY 117
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+I+GLC + A + D+M ++G P+ +Y +LV G+++ V+ + +M E
Sbjct: 118 TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 177
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVL 404
+ + ITY ++ +C + A++L KE++ D +TY+ ++D L
Sbjct: 178 RGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSL 230
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 15/268 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTI 179
L+LF + D TY + L + + +V M++ C + Y+++
Sbjct: 204 LQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG--CSPNVVTYSSL 261
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
++ +A KL A + + M S C P+I +YN + G+ I+ Y
Sbjct: 262 LHGLCKAGKLDEATALLQRMTRSG---CSPNIVTYNTIIDGHCKLGR---IDEAYH---- 311
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
L ++MV+ G +P++ + ++ + DA+ + M V Y+PN F+Y+ L+
Sbjct: 312 -LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM-VEKGYVPNLFTYNSLLDM 369
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
C + + A +L M +KG VP+ SYN++++ L +V E V L +M+ D
Sbjct: 370 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 429
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQ 387
+T+ T++D +C+ R A +L +Q
Sbjct: 430 IVTFNTIIDAMCKTYRVDIAYELFNLIQ 457
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 22/233 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I + ++ A V M C+P++ +Y L F G +
Sbjct: 117 YTTVINGLCKLDQVDEACRVMDKMIQRG---CQPNVITYGTLVDGFCRVGD--------L 165
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L ++M G P+ + N+++ G ++ AL++F +M + P+ F+Y
Sbjct: 166 DGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYST 225
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ L G+ +A L + M KG P+ +Y+SL+ L G+++E L M
Sbjct: 226 IVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 285
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG------YTYTKLLD 402
+ +TY T++D C+ GR EA LL+E ++DG TYT LLD
Sbjct: 286 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEE-----MVDGGCQPNVVTYTVLLD 333
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NTII + ++ A +F ++ S C P++ +YN L + ++
Sbjct: 433 FNTIIDAMCKTYRVDIAYELFNLIQESG---CTPNLVTYNSLVHGLCKSRRFDQAEYLLR 489
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R KQ G PDI + N++I G S V+ A ++F QM + P+ +Y
Sbjct: 490 EMTR---KQ----GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM-LSDGLAPDDVTYSI 541
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC A + + M + GF P + +Y +L+ G +++ ++ L ++ K
Sbjct: 542 VISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG 601
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D +T+ +D + +RGR +A +LL+ + L+ D TY LL
Sbjct: 602 SYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLL 648
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 12/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I +A K+ V + + M ++ C P I ++N + A TY +
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNN---CVPDIVTFNTIIDAMC----KTYRVDIAY 450
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF + G P++ + NS++ G S + A + +M P+ +Y+
Sbjct: 451 E----LFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 506
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC R A +L +M G P +Y+ ++S+L ++E L M++
Sbjct: 507 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 566
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK-NLIDGYTYTKLLDVL 404
ITY T++D C+ G +A+++L+ L +K + D T++ +D L
Sbjct: 567 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWL 616
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E+ +++ + TP+ YN++++ ++R+ +A Y+ + M +R C P I +Y
Sbjct: 451 ELFNLIQESGCTPNL----VTYNSLVHGLCKSRRFDQAEYLLREM--TRKQGCSPDIITY 504
Query: 215 NI----------------LFTAFLSRG----KNTYINHV-------YMETIRCLFKQMVN 247
N LF LS G TY + +M+ + + M+
Sbjct: 505 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 564
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+G +P + ++I G+ + +++ AL I Q+ + P+ ++ I L +GR +
Sbjct: 565 NGFDPGAITYGTLIDGFCKTGNLDKALEIL-QLLLSKGSYPDVVTFSIFIDWLSKRGRLR 623
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A EL + M R G VP + +YN+L+ E+ V M + D TY T++
Sbjct: 624 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683
Query: 368 DEI 370
+
Sbjct: 684 GHL 686
>gi|225435096|ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Vitis vinifera]
Length = 501
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 147/306 (48%), Gaps = 45/306 (14%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
+DP L LFN +Q F+HD +Y + KL ++ ++ ++ +++ + C E
Sbjct: 101 QDPDDALSLFN-QYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRC-RET 158
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYM--------------------KNSRNLEC------- 207
L+ +I + +++ +AV +F+ M +N R L+
Sbjct: 159 LFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRS 218
Query: 208 ------RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMI 261
R SI S+NI+ +L +G+ V F++M++ ++P + + NS+I
Sbjct: 219 TKMGFRRNSI-SFNIIIKGWLGKGEWDKAWQV--------FEEMIDKEVKPTVVTFNSLI 269
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
++ A+ + M + + PN+ +Y L+ GLC+ G+ K A+++ +M +G
Sbjct: 270 GFLCGKGDLDGAMGLLEDM-IQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGC 328
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P ++ L+S L G ++++ L EM ++ D +TY +++ +C+ GRA EA K
Sbjct: 329 KPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYK 388
Query: 382 LLKELQ 387
+L E+Q
Sbjct: 389 VLVEMQ 394
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 132/289 (45%), Gaps = 22/289 (7%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRK-LGAA---KMYQEMDDVVNQ 162
L NV+ + L + +F+ ++K FR ++ +++I+ + LG K +Q ++++++
Sbjct: 198 LLNVLVENDRFLDAIGIFDRSTKMG-FRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDK 256
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
+ T +N++I F L A+ + + M R+ RP+ +Y +L
Sbjct: 257 EVKP-----TVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRH---RPNAVTYALLMEGLC 308
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV 282
S GK Y E + +F M G +P + + ++ ++D+ + +M
Sbjct: 309 SLGK-------YKEAKKMMF-DMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKR 360
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+ P+ +Y+ LI+ LC +GR A ++ EM+ G P++ +Y +V + E
Sbjct: 361 -RRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFE 419
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+K L M+ ++ ++ + + G+ A +L+E++ + +
Sbjct: 420 GGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKM 468
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I+ Y S A+ +F +M +N S++ L++ L R +A + D +
Sbjct: 162 ALIQHYGKSQMPEKAVELFQRM-PSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTK 220
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
GF +S S+N ++ GE ++ + EMI+K+ +T+ +++ +C +G
Sbjct: 221 MGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDG 280
Query: 379 AMKLLKEL-QNKNLIDGYTYTKLLDVL 404
AM LL+++ Q ++ + TY L++ L
Sbjct: 281 AMGLLEDMIQKRHRPNAVTYALLMEGL 307
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 147/354 (41%), Gaps = 79/354 (22%)
Query: 118 LVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVV-----NQMLATPSFCGT 172
+V F WA KQ + H +H + L + YQ M DVV +M+ +FC
Sbjct: 37 MVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLMWDVVKVMKSKRMVNVETFC-- 94
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
I+ +A A+K+ AVY F M + P++ ++N L +A L + KN
Sbjct: 95 -----IIMRKYARAQKVEEAVYTFNIMD---KYDVPPNLAAFNGLLSA-LCKSKNVRKAQ 145
Query: 233 VYMETI---------------------------RCLFKQMVNDGIEPDIFSLNSMIKGYI 265
++I R +F++MV++G PDI + M+
Sbjct: 146 EIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLC 205
Query: 266 LSNHVNDALRIFHQMG--------VVYNYL--------------------------PNSF 291
+ V++AL I ++M +Y+ L P+
Sbjct: 206 KAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVA 265
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
Y+ LI C R KN + +EM KG P+S+++N ++S+L GE +E + M
Sbjct: 266 VYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRM 325
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
I+ P D TY ++ C R +A+K+ K ++ K + +T+ L++ L
Sbjct: 326 IKVCEP-DADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGL 378
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 24/259 (9%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-TEALYNTIIYFFAEARKLSRA 192
R D TY IM L A E +VN+M +T C T +Y+ +++ + ++ A
Sbjct: 191 RPDIVTYGIMVDVLCKAGRVDEALGIVNEMDST--VCKPTPFIYSVLVHTYGIENRIEDA 248
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAF--LSRGKNTYINHVYMETIRCLFKQMVNDGI 250
V F M+N+ P + YN L AF +R KN Y R L +M G+
Sbjct: 249 VSTFLEMENN---GIEPDVAVYNALIGAFCKANRLKNVY---------RVL-NEMDCKGV 295
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P+ + N ++ I ++A R+F +M V P++ +Y +I C + K A
Sbjct: 296 TPNSRTFNIILSSLIGRGETDEAYRVFLRMIKVCE--PDADTYTMMIKMFCERDELKKAL 353
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
++ MK K F+PS ++ L++ L G+V + L EMIEK +T+ + +
Sbjct: 354 KVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLL 413
Query: 371 CRRGRAGEAMKLLKELQNK 389
+ GR +LK LQ K
Sbjct: 414 IKEGRED----VLKFLQKK 428
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 132/305 (43%), Gaps = 45/305 (14%)
Query: 118 LVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFC-- 170
++ L F WA KQ F+++ +Y+ + LG K ++ + +VN+M L +F
Sbjct: 138 VIALSFFTWAEKQKGFKYNTESYNALIEALGKIKQFKLIRSLVNEMKSRKLLNKDTFALI 197
Query: 171 ------------GTEAL--------------YNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
EA +N ++ ++R + +A VF MK R
Sbjct: 198 SRRHARARKVEEAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRF 257
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+ P I+SY IL + ++ VY+E M DG EPD+ + +I Y
Sbjct: 258 V---PDIKSYTILLEGWGKEHNLLRLDEVYLE--------MKYDGFEPDVVTYGILISAY 306
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ + A+ +FH+M N P Y LI+GL ++ R A E + K GF P
Sbjct: 307 CKAKKYDAAIELFHEMEA-KNCKPTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPE 365
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ +YNSLV A + +++ + + EM + + TY +L + + R EA +
Sbjct: 366 APTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQ 425
Query: 385 ELQNK 389
++ N+
Sbjct: 426 KMSNE 430
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 124/298 (41%), Gaps = 57/298 (19%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
K+ RF D +Y I+ G +D+V +M F Y +I + +A+K
Sbjct: 253 KKRRFVPDIKSYTILLEGWGKEHNLLRLDEVYLEM-KYDGFEPDVVTYGILISAYCKAKK 311
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
A+ +F M+ ++N C+P+ Y L S + + F++ +
Sbjct: 312 YDAAIELFHEME-AKN--CKPTPHVYCTLINGLGSEKR--------LSEALEFFERFKSC 360
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL-------- 300
G P+ + NS++ Y S ++DA ++ +M ++ PNS +YD ++H L
Sbjct: 361 GFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRK-HSAGPNSRTYDIILHHLIKARRTNE 419
Query: 301 ----------------------------CAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
C + R A+++ D+MK KG +P Y+ L+
Sbjct: 420 AYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLI 479
Query: 333 SALALNGEVEETVKNLWEMIEK--QRPVDFIT--YRTVLDEICRRGRAGEAMKLLKEL 386
++L ++ E K EM++ + P + + +LDE G+ EA+ L +++
Sbjct: 480 TSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDE----GKNDEALNLARKI 533
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 13/298 (4%)
Query: 89 TQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLG 148
T+ + ++ L P+F++ + NV+ + L+ F W + FRHD T+ + LG
Sbjct: 104 TRLQNSIRSLVPQFDHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILG 163
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A ++ M E L+ +I + +A + +V VF+ MK L
Sbjct: 164 RASKLNHARCILLDM-PKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMK---ELGVE 219
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+I+SY+ LF L RG+ YM R F M+N+G+ P + N MI G+ LS
Sbjct: 220 RTIKSYDALFKVILRRGR-------YMMAKR-YFNAMLNEGVMPTCHTYNIMIWGFFLSL 271
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V A R F +M P+ +Y+ +I+G + + A + EMK + P+ SY
Sbjct: 272 KVETANRFFEEMK-ERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISY 330
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+++ G V++ ++ EM + +TY T+L +C + EA ++KE+
Sbjct: 331 TTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEM 388
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIE--PDIFSLNSMIKGYILSNHVNDALRIFHQM-- 280
G+ + +NH RC+ M G+E D+F L +I Y + V +++++F +M
Sbjct: 163 GRASKLNHA-----RCILLDMPKKGVEWDEDLFVL--LIDSYGKAGIVQESVKVFQKMKE 215
Query: 281 -GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
GV SYD L + +GR A+ + M +G +P+ +YN ++ L+
Sbjct: 216 LGVERTIK----SYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSL 271
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+VE + EM E++ D +TY T+++ R + EA K E++ +N+
Sbjct: 272 KVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNI 323
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 26/241 (10%)
Query: 158 DVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK-------YMKNSRNLECR 208
DV+ M L+ P+ G Y +I F ++ RAV + ++ +LE
Sbjct: 419 DVLKAMIRLSIPTEAGH---YGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEME 475
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
S YN++ + G+ + LF+Q++ G++ D + N++I+G+
Sbjct: 476 SS--GYNLIIEYLCNSGQTS--------KAETLFRQLMKKGVQ-DPIAFNNLIRGHSKEG 524
Query: 269 HVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
A I MG +P + +Y LI +G +A+ D M G +P S
Sbjct: 525 APESAFEILKIMG--RREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSL 582
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ S++ +L +G ++ + + M+EK + +L+ + RG EA+ + L
Sbjct: 583 FRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLM 642
Query: 388 N 388
N
Sbjct: 643 N 643
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 104/266 (39%), Gaps = 19/266 (7%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ +A TY + L + E +VV +M+ +++ +I +A +L A
Sbjct: 358 IKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAA 417
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V K M L Y +L F G VY ++ L K + + I
Sbjct: 418 ADVLKAMIR---LSIPTEAGHYGVLIENFCKSG-------VYDRAVKLLDKLIEKEIILR 467
Query: 253 DIFSLNSMIKGYIL-------SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
SL GY L S + A +F Q+ + + + +++ LI G +G
Sbjct: 468 PQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQL--MKKGVQDPIAFNNLIRGHSKEGA 525
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
++A E+ M R+ + +Y L+ + GE + L MIE D +R+
Sbjct: 526 PESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRS 585
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL 391
V++ + GR A +++ + K +
Sbjct: 586 VMESLFEDGRIQTASRVMNNMVEKGV 611
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS-- 292
++T + MV G++ ++ + +++ +L HV +AL G + + N
Sbjct: 596 IQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEAL------GRIDLLMNNGCEPD 649
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+D L+ LCA+G+T A +L D + + S SY +++ AL G+ L +++
Sbjct: 650 FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAYSILCKIM 709
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
+K D+ + + ++ + G +A L + ++ + + G
Sbjct: 710 QKGGATDWSSCKDLIRSLNEEGNTKQADILSRMIKGEEKVHG 751
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 118/227 (51%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + +L A+ K++ N + C+P++ ++NI+ + S G+ +M
Sbjct: 281 YNVLINGICKEGRLDEAI---KFLNNMPSYGCKPNVITHNIILRSMCSTGR-------WM 330
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R L M+ G P + + N +I + A+ + +M + +PNS SY+
Sbjct: 331 DAER-LLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK-HGCVPNSLSYNP 388
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+HG C + + A E + M +G P +YN+L++AL +G+V+ V+ L ++ K
Sbjct: 389 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
ITY TV+D + + G+ A++LL+E++ K L D TY+ LL
Sbjct: 449 CSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLL 495
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 22/291 (7%)
Query: 122 ELFNWASKQPRF--RHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALY 176
E + + P + + + T++I+ R + + + + + +++ ML +PS +
Sbjct: 296 EAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSV----VTF 351
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +I F R L RA+ V + M C P+ SYN L F K M+
Sbjct: 352 NILINFLCRKRLLGRAIDVLEKMPKH---GCVPNSLSYNPLLHGFCQEKK--------MD 400
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ MV+ G PDI + N+++ V+ A+ I +Q+ P +Y+ +
Sbjct: 401 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSS-KGCSPVLITYNTV 459
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GL G+T+ A EL +EM+RKG P +Y++L+ L G+V+E +K +M
Sbjct: 460 IDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSI 519
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVLED 406
+TY ++ +C+ + A+ L + K TYT L++ + D
Sbjct: 520 KPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + + L F GK + ME + N G PD+ + N +I GY S
Sbjct: 139 PDVIACTSLIRGFCRSGKTKKATRI-MEILE-------NSGAVPDVITYNVLIGGYCKSG 190
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ AL + +M V P+ +Y+ ++ LC G+ K A E+ D ++ P +Y
Sbjct: 191 EIDKALEVLERMSVA----PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITY 246
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L+ A + V + +K L EM +K D +TY +++ IC+ GR EA+K L +
Sbjct: 247 TILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 304
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN--YLPNSFSYDYLIHG 299
++M+ G PD+ + S+I+G+ S A RI M ++ N +P+ +Y+ LI G
Sbjct: 129 LERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRI---MEILENSGAVPDVITYNVLIGG 185
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
C G A E+ ++R P +YN+++ +L +G+++E ++ L ++++ D
Sbjct: 186 YCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPD 242
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
ITY +++ C G+AMKLL E++ K D TY L++
Sbjct: 243 VITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
F+ N ++ + + + + L+ +M + +P+ + LI G C G+TK A + +
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERM-IYQGDIPDVIACTSLIRGFCRSGKTKKATRIME 165
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
++ G VP +YN L+ +GE+++ ++ L M D +TY T+L +C G
Sbjct: 166 ILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSG 222
Query: 375 RAGEAMKLL-KELQNKNLIDGYTYTKLLDVLEDDFG 409
+ EAM++L ++LQ + D TYT L++ +D G
Sbjct: 223 KLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSG 258
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 107/227 (47%), Gaps = 16/227 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + ++ ++ +A+ V + M + P + +YN + + GK
Sbjct: 179 YNVLIGGYCKSGEIDKALEVLERMSVA------PDVVTYNTILRSLCDSGK-------LK 225
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +Q+ + PD+ + +I+ + V A+++ +M P+ +Y+
Sbjct: 226 EAMEVLDRQLQRE-CYPDVITYTILIEATCNDSGVGQAMKLLDEMRK-KGCKPDVVTYNV 283
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G+C +GR A + + M G P+ ++N ++ ++ G + + L +M+ K
Sbjct: 284 LINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+T+ +++ +CR+ G A+ +L+++ + + +Y LL
Sbjct: 344 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLL 390
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 17/228 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K +LEC S+ +NIL +F+ G+ +
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE--------I 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + + P + S N+++ GYI +++ R+ + M P+ ++Y
Sbjct: 153 RLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS-GVQPDVYTYSV 211
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM G VP+ ++ +L+ NG V+ ++ +M+ +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY T++ +C++G +A L+ E+ K L D TYT L+D
Sbjct: 272 LSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 121/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWSLRPSVVS----FNTLMNGYIKLGDLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + + +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLS-QSLSADLITYNTLIYGLCKKGDLKQAQDLIDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGNCKEGD--------LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G++PS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P ++E + NV+ ++ L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRNLVPSIDHELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E L+ +I + +A + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEE---LGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF L RG+ YM R F +M+++GIEP + N M+ G+ LS V A
Sbjct: 118 YDALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M +P+ +Y+ +++G C + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMKS-REIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
V++ ++ + EM + ITY T+L +C + EA +LKE+ K
Sbjct: 229 GYVSVDRVDDALRLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEK 284
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML + T +N +++ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKML-SEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSR---EIMPDVVTYNTMV-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S G
Sbjct: 247 KG-FGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISGQCKAG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+++ L MI P + Y +++ C+ G +A+KLL ++ K++I
Sbjct: 306 DLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDII 358
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y + V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SYD L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ CR + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 13/298 (4%)
Query: 89 TQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLG 148
T+ + ++ L P+F++ + NV+ + L+ F W + FRHD T+ + LG
Sbjct: 104 TRLQNSIRSLVPQFDHSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILG 163
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A ++ M E L+ +I + +A + +V VF+ MK L
Sbjct: 164 RASKLNHARCILLDM-PKKGVEWDEDLFVLLIDSYGKAGIVQESVKVFQKMK---ELGVE 219
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+I+SY+ LF L RG+ YM R F M+N+G+ P + N MI G+ LS
Sbjct: 220 RTIKSYDALFKVILRRGR-------YMMAKR-YFNAMLNEGVMPTCHTYNIMIWGFFLSL 271
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V A R F +M P+ +Y+ +I+G + + A + EMK + P+ SY
Sbjct: 272 KVETANRFFEEMK-ERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISY 330
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+++ G V++ ++ EM + +TY T+L +C + EA ++KE+
Sbjct: 331 TTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEM 388
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 13/218 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I+ F + K+ A F+ MK R P + +YN + N Y M
Sbjct: 260 YNIMIWGFFLSLKVETANRFFEEMKERR---ISPDVVTYNTMI--------NGYYRIKKM 308
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E F +M IEP + S +MIKGY+ V+D LR+F +M + PN+ +Y
Sbjct: 309 EEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVGRVDDGLRLFEEMK-SFGIKPNAVTYST 367
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GLC + A+ + EM + P S + L++ G+++ L MI
Sbjct: 368 LLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRL 427
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
P + Y +++ C+ G A+KLL +L K +I
Sbjct: 428 SIPTEAGHYGVLIENFCKSGVYDRAVKLLDKLIEKEII 465
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIE--PDIFSLNSMIKGYILSNHVNDALRIFHQM-- 280
G+ + +NH RC+ M G+E D+F L +I Y + V +++++F +M
Sbjct: 163 GRASKLNHA-----RCILLDMPKKGVEWDEDLFVL--LIDSYGKAGIVQESVKVFQKMKE 215
Query: 281 -GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
GV SYD L + +GR A+ + M +G +P+ +YN ++ L+
Sbjct: 216 LGVERTIK----SYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSL 271
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+VE + EM E++ D +TY T+++ R + EA K E++ +N+
Sbjct: 272 KVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNI 323
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 26/241 (10%)
Query: 158 DVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK-------YMKNSRNLECR 208
DV+ M L+ P+ G Y +I F ++ RAV + ++ +LE
Sbjct: 419 DVLKAMIRLSIPTEAGH---YGVLIENFCKSGVYDRAVKLLDKLIEKEIILRPQNSLEME 475
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
S YN++ + G+ + LF+Q++ G++ D + N++I+G+
Sbjct: 476 SS--GYNLIIEYLCNSGQTS--------KAETLFRQLMKKGVQ-DPIAFNNLIRGHSKEG 524
Query: 269 HVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
A I MG +P + +Y LI +G +A+ D M G +P S
Sbjct: 525 APESAFEILKIMG--RREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSL 582
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ S++ +L +G ++ + + M+EK + +L+ + RG EA+ + L
Sbjct: 583 FRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEALGRIDLLM 642
Query: 388 N 388
N
Sbjct: 643 N 643
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 104/266 (39%), Gaps = 19/266 (7%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ +A TY + L + E +VV +M+ +++ +I +A +L A
Sbjct: 358 IKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAA 417
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V K M L Y +L F G VY ++ L K + + I
Sbjct: 418 ADVLKAMIR---LSIPTEAGHYGVLIENFCKSG-------VYDRAVKLLDKLIEKEIILR 467
Query: 253 DIFSLNSMIKGYIL-------SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
SL GY L S + A +F Q+ + + + +++ LI G +G
Sbjct: 468 PQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQL--MKKGVQDPIAFNNLIRGHSKEGA 525
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
++A E+ M R+ + +Y L+ + GE + L MIE D +R+
Sbjct: 526 PESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENGHIPDSSLFRS 585
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL 391
V++ + GR A +++ + K +
Sbjct: 586 VMESLFEDGRIQTASRVMNNMVEKGV 611
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS-- 292
++T + MV G++ ++ + +++ +L HV +AL G + + N
Sbjct: 596 IQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEAL------GRIDLLMNNGCEPD 649
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+D L+ LCA+G+T A +L D + + S SY +++ AL G+ L +++
Sbjct: 650 FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDALLTAGKTLNAYSILCKIM 709
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
+K D+ + + ++ + G +A L + ++ + + G
Sbjct: 710 QKGGATDWSSCKDLIRSLNEEGNTKQADILSRMIKGEEKVHG 751
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 146/344 (42%), Gaps = 69/344 (20%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F+ D +Y + + L AAK +++++++ +M+ E ++ ++ FF + RA
Sbjct: 277 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM-PNEVTFDMLVRFFCRGGMVERA 335
Query: 193 VYV--------------------------------FKYMKNSRNLECRPSIRSYNILFTA 220
+ V F+++ N + C P SY +
Sbjct: 336 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 395
Query: 221 FLSRG---------------KNTYINHVYMETIRC-------------LFKQMVNDGIEP 252
L R KN N V T C L +QM G E
Sbjct: 396 -LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 454
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+I + N+++ G+ + V+ AL +F+ M PN+ +Y L+ GLC R A EL
Sbjct: 455 NIVTYNALVNGFCVQGRVDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAEL 510
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM +K P+ ++N LVS G ++E ++ + +M+E + ITY T+LD I +
Sbjct: 511 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 570
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFGNSIR 413
+ EA++LL L + + D TY+ ++ VL ED +I+
Sbjct: 571 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIK 614
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 19/258 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
DA TY + R L E +++ ML PS Y ++ ++ +A
Sbjct: 175 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV----VTYTVLLEAVCKSTGFGQA 230
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ V M R C P+I +YN++ G+ ++ R ++ + G +P
Sbjct: 231 MEVLDEM---RAKGCTPNIVTYNVIINGMCREGR--------VDDAREFLNRLSSYGFQP 279
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D S +++KG + D +F +M + N +PN ++D L+ C G + A ++
Sbjct: 280 DTVSYTTVLKGLCAAKRWEDVEELFAEM-MEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 338
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++M G ++ N +++ + G V++ + L M D I+Y TVL +CR
Sbjct: 339 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 398
Query: 373 RGRAGEAMKLLKELQNKN 390
R +A +LLKE+ KN
Sbjct: 399 AERWEDAKELLKEMVRKN 416
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G D+F+ N+++ GY ++ A R+ M V P++++Y +I GLC +GR
Sbjct: 139 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA----PDAYTYTPIIRGLCDRGRVGE 194
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L D+M +G PS +Y L+ A+ + + ++ L EM K + +TY +++
Sbjct: 195 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 254
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+CR GR +A + L L + D +YT +L L
Sbjct: 255 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 291
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 18/240 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ A +L A + M +C P++ ++N+L + F +G M
Sbjct: 491 YTTLLTGLCNAERLDAAAELLAEMLQK---DCAPNVVTFNVLVSFFCQKG--------LM 539
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
+ L +QM+ G P++ + N+++ G + +AL + H G+V N + P+ +Y
Sbjct: 540 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLH--GLVSNGVSPDIVTYS 597
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I L + R + A ++ ++ G P + YN ++ AL + + M+
Sbjct: 598 SIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN 657
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNSIRH 414
+ +TY T+++ + E LL+EL ++ +++ LL+ F N H
Sbjct: 658 GCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLN----KNLLEEWRPKFSNQTVH 713
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+ + LI LC +GRT +A + +R G +YN+LV+ G+++ +
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL 166
Query: 348 LWEMIEKQRPV--DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+ M PV D TY ++ +C RGR GEA+ LL ++ ++ TYT LL+ +
Sbjct: 167 IASM-----PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 221
Query: 405 --EDDFGNSI 412
FG ++
Sbjct: 222 CKSTGFGQAM 231
>gi|115443739|ref|NP_001045649.1| Os02g0110400 [Oryza sativa Japonica Group]
gi|41052925|dbj|BAD07836.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535180|dbj|BAF07563.1| Os02g0110400 [Oryza sativa Japonica Group]
gi|215706484|dbj|BAG93340.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622028|gb|EEE56160.1| hypothetical protein OsJ_05062 [Oryza sativa Japonica Group]
Length = 747
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 15/286 (5%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
+ F +A ++ F + +T+ ++ L + +M ++ + + S EA +I
Sbjct: 121 QFFRFAYRRAGFSPEPATFSLLIPILASHRMLNHARCILLDTMPSFSIAPEEATVAALIA 180
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ +A +V +F+ M + L + SYN + A L RG+ +Y
Sbjct: 181 AYGKANIPQESVKLFRLMPD---LGIARTALSYNAVLKAILCRGREAMARRIY------- 230
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
M+ D + PD+ + N++I G+ L + ALR+F M + P+ +Y+ L++
Sbjct: 231 -NAMIADAVTPDLSTYNTLIWGFGLCKKMEAALRVFGDMKD-HGVTPDVTTYNTLLNAWV 288
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G ++AR++ DEM GF +S SYN ++ G+VEE V EM EK +
Sbjct: 289 RAGDLESARKVFDEMPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSEMGEKGLRLSEK 348
Query: 362 TYRTVLDEIC-RRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVL 404
T+ ++ +C GR EA K + ++ + L D + +L+ L
Sbjct: 349 TFAALMPGLCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTL 394
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 30/260 (11%)
Query: 159 VVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
+ N M+A TP + YNT+I+ F +K+ A+ VF MK+ P + +YN
Sbjct: 229 IYNAMIADAVTPDL----STYNTLIWGFGLCKKMEAALRVFGDMKDH---GVTPDVTTYN 281
Query: 216 ILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
L A++ G +E+ R +F +M G + S N MIKGY+ + V +A+
Sbjct: 282 TLLNAWVRAGD--------LESARKVFDEMPGAGFAQNSVSYNVMIKGYVEAGKVEEAVG 333
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCA-QGRTKNARELCDEMKRKGFVPSSKS-YNSLVS 333
+F +MG L ++ L+ GLC +GR AR+ D+M + P KS + LV+
Sbjct: 334 LFSEMGEKGLRLSEK-TFAALMPGLCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVT 392
Query: 334 ALALNGEVEETVKNLWEMIE-KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-- 390
L G+++ + + + K VD Y +++ +C G+ A++++ EL K
Sbjct: 393 TLCRAGDLDGALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMDELLEKGTL 452
Query: 391 ------LIDGYTYTKLLDVL 404
+++G Y +++ L
Sbjct: 453 LSPKSPVLEGPAYNPVIEYL 472
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYI---LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
F+Q++ G++ D + NS+I+G+ + + L I + GV + P S + L+
Sbjct: 484 FFRQLMKKGVD-DKAAFNSLIRGHAKEGVPEAAQEILAIMTRRGVRTD--PES--HALLV 538
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
+ +A+ D M +G VPS + S++ AL +G V+ + + MIEK
Sbjct: 539 DSFLKKNEPADAKTALDSMMEQGHVPSPSLFMSVMVALFNSGRVQTASRVMKSMIEKGVT 598
Query: 358 VDFITYRTVLDEICRRGRAGEAM 380
+ +L+ + RG EA+
Sbjct: 599 ENMDMAHKILEALFMRGHVEEAI 621
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 108/276 (39%), Gaps = 21/276 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +TY+ + A + V ++M F YN +I + EA K+ AV +
Sbjct: 276 DVTTYNTLLNAWVRAGDLESARKVFDEMPGA-GFAQNSVSYNVMIKGYVEAGKVEEAVGL 334
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP-DI 254
F M + L R S +++ L + + R M + P D
Sbjct: 335 FSEM-GEKGL--RLSEKTFAALMPGLCD-------DEGRVVEARKAMDDMAERRLTPKDK 384
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
++ + ++ AL + + G + L + Y L+ LCA G+ A E+ D
Sbjct: 385 SVFLRLVTTLCRAGDLDGALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMD 444
Query: 315 EMKRKGFVPSSKS-------YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
E+ KG + S KS YN ++ L NG + + + + K+ D + +++
Sbjct: 445 ELLEKGTLLSPKSPVLEGPAYNPVIEYLCSNGNTSKA-ETFFRQLMKKGVDDKAAFNSLI 503
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ G A ++L + + + D ++ L+D
Sbjct: 504 RGHAKEGVPEAAQEILAIMTRRGVRTDPESHALLVD 539
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 110/287 (38%), Gaps = 28/287 (9%)
Query: 129 KQPRFRH---DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA------LYNTI 179
K +F+H D Y ++ L A +V++++L + ++ YN +
Sbjct: 409 KSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMDELLEKGTLLSPKSPVLEGPAYNPV 468
Query: 180 IYFFAEARKLSRAVYVFK-YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
I + S+A F+ MK + + ++N L G E
Sbjct: 469 IEYLCSNGNTSKAETFFRQLMKKGVDDKA-----AFNSLIRGHAKEG--------VPEAA 515
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+ + M G+ D S ++ ++ N DA M + ++P+ + ++
Sbjct: 516 QEILAIMTRRGVRTDPESHALLVDSFLKKNEPADAKTALDSM-MEQGHVPSPSLFMSVMV 574
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
L GR + A + M KG + + ++ AL + G VEE + + M+E
Sbjct: 575 ALFNSGRVQTASRVMKSMIEKGVTENMDMAHKILEALFMRGHVEEAIGRVNLMVENGCLP 634
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +L +C + EA KL +++ + TY ++L+ L
Sbjct: 635 DL---DKLLIALCENDKVMEAHKLADFALDRDFDVSFSTYDRVLEAL 678
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 15/270 (5%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA K+ F+HD STY + R L A++Y EM + +++ + A+ +
Sbjct: 108 VKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSE 167
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
++ A+ +S+A+ VF K + C+P+ +YN + + G++ ++ VY E
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRK---CKPTSSTYNSVILMLMQEGQHEKVHEVYTE-- 222
Query: 239 RCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYL 296
M N+G PD + +++I Y + A+R+F +M N + P Y L
Sbjct: 223 ------MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK--DNCMQPTEKIYTTL 274
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ G+ + A +L +EMKR G P+ +Y L+ L G V+E +M+
Sbjct: 275 LGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D + +++ + + GR E + E+
Sbjct: 335 TPDVVFLNNLMNILGKVGRVEELTNVFSEM 364
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 125/300 (41%), Gaps = 55/300 (18%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
S+Y + R A +++ EM D Q TE +Y T++ + + K+ +A+ +F+
Sbjct: 241 SSYEKLGRNDSAIRLFDEMKDNCMQ--------PTEKIYTTLLGIYFKVGKVEKALDLFE 292
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
MK + C P++ +Y L GK ++ Y +K M+ DG+ PD+ L
Sbjct: 293 EMKRAG---CSPTVYTYTELIKGL---GKAGRVDEAY-----GFYKDMLRDGLTPDVVFL 341
Query: 258 NSMIKGYILSNHVNDALRIFHQMG--------VVYNYL---------------------- 287
N+++ V + +F +MG V YN +
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
Query: 288 -----PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
P+ F+Y LI G C R + A L +EM KGF P +Y SL++AL E
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ E+ E V Y ++ + G+ EA+ L E++N+ D Y Y L+
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 152 MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMK-NSRNLECRPS 210
+ +EMD+ F A Y ++I +A++ A +FK +K N N+ S
Sbjct: 431 LLEEMDE--------KGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV----S 478
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
R Y ++ F GK + LF +M N G PD+++ N+++ G + + +
Sbjct: 479 SRVYAVMIKHFGKCGK--------LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 271 NDA---LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
N+A LR + G + S++ +++G G + A E+ + +K G P +
Sbjct: 531 NEANSLLRKMEENGC----RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
YN+L+ A G EE + + EM +K D ITY ++LD +
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 113/301 (37%), Gaps = 52/301 (17%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY + + LG A E ML TP N ++ + ++ V
Sbjct: 305 TYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV----VFLNNLMNILGKVGRVEELTNV 360
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M R C P++ SYN + A + ++ + F +M D + P F
Sbjct: 361 FSEMGMWR---CTPTVVSYNTVIKALFE-------SKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS--------------- 292
+ + +I GY +N V AL + +M Y L N+
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 293 -----------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
Y +I G+ A +L +EMK +G P +YN+L+S + G +
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKL 400
E L +M E D ++ +L+ R G A+++ + +++ + DG TY L
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 401 L 401
L
Sbjct: 591 L 591
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLASG-- 207
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 208 -VQPDVYTYSVLINGLCKESK--------MDGANELFDEMLVKGLVPNGVTFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A +L DEM KG P
Sbjct: 259 KNGRVDLAMEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 318 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLKPDTGTYTMIIN 395
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
++KQM++ + PD+ + N++I G + A + +M + P+ F+Y LI G
Sbjct: 269 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM-KGLKPDKFTYTTLIDGC 327
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A E M ++ +Y +L+S L G + K L EM+ D
Sbjct: 328 CKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDT 387
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQ 387
TY +++E C++G + KLLKE+
Sbjct: 388 GTYTMIINEFCKKGDVWKGSKLLKEMH 414
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 13/233 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY ++ L +++ ++ML + T+I + ++ A+ +
Sbjct: 211 DVYTYSVLINGLCKESKMDGANELFDEMLV-KGLVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+K M + L P + +YN L +G ++ L +M G++PD F
Sbjct: 270 YKQMLSQSLL---PDLITYNTLIYGLCKKGD--------LKQAHDLIDEMSMKGLKPDKF 318
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ ++I G ++ A +M + N + +Y LI GLC +GR+ +A ++ E
Sbjct: 319 TYTTLIDGCCKEGDLDTAFEHRKRM-IQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
M G P + +Y +++ G+V + K L EM +TY +++
Sbjct: 378 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMN 430
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF-----HQMGVVYN---------------------- 285
DI+ + +I Y+ S + DA+ + H++ V ++
Sbjct: 71 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 286 -------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M+ D TY +++ +C+ + A +L E+ K L+ +G T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTF 250
Query: 398 TKLLD 402
T L+D
Sbjct: 251 TTLID 255
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 13/237 (5%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E + V+ +M++ +Y T+I+ F KL K+ + + P +Y
Sbjct: 346 EAEKVLREMMSQ-KIIPDNVVYTTLIHGFF---KLGHVRTANKWFDEMLSKKISPDYITY 401
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
L F GK + LF +M++ G++PD + ++I Y + + +A
Sbjct: 402 TTLIQGFGQGGKVIEPQN--------LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+ ++M V PN +Y LI GLC G A EL DEM++KG + YNS+V+
Sbjct: 454 SLHNEM-VQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ G +E+ +K + EM D ITY TV+D CR G +A KLL+E+ ++ L
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 14/267 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + + G E ++ ++M++ E Y T+I + +A ++ A
Sbjct: 397 DYITYTTLIQGFGQGGKVIEPQNLFHEMISR-GLKPDEVTYTTLIDVYCKAGEMVNA--- 452
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F + P+I +Y L G+ ++T L +M G++ ++
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGE--------LDTANELLDEMRKKGLQLNVC 504
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
NSM+ G + ++ A+++ +M V P++ +Y +I C G A +L E
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVA-GIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +G P+ ++N L++ + G +E+ + L M+EK D ITY T++ + C R
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
K+ K ++N+ + D TY L+
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILI 650
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 10/192 (5%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
SYNI+ + GK ++ L QM PD+ S +++I GY +
Sbjct: 260 SYNIIIYSLCRLGK--------VKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKK 311
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
AL++ M + PN ++Y+ +I LC G++ A ++ EM + +P + Y +L+
Sbjct: 312 ALKLMDDMQI-KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
G V K EM+ K+ D+ITY T++ + G+ E L E+ ++ L
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430
Query: 392 IDGYTYTKLLDV 403
D TYT L+DV
Sbjct: 431 PDEVTYTTLIDV 442
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 213 SYNILFT-----AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
SY ++ T AFLSR N E I K GI + S N +I
Sbjct: 218 SYGLVVTVDSCNAFLSRIANN------SEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRL 271
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V +A R+ QM + P+ SY +I G C G K A +L D+M+ KG P+ +
Sbjct: 272 GKVKEAHRLLMQMDF-RSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYT 330
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YNS++ L G+ E K L EM+ ++ D + Y T++ + G A K E+
Sbjct: 331 YNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEML 390
Query: 388 NKNLIDGY-TYTKLL 401
+K + Y TYT L+
Sbjct: 391 SKKISPDYITYTTLI 405
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 106/213 (49%), Gaps = 22/213 (10%)
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
R +Y +KY P+ +++I F + G ++ R L ++++ G+
Sbjct: 178 RLIYTYKYWG--------PNPIAFDIFFQVLVEIG--------HLSEARKLLDKLLSYGL 221
Query: 251 EPDIFSLNSMIKGYIL-SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ S N+ + S + A+++F + G+ +N + SY+ +I+ LC G+ K A
Sbjct: 222 VVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWN----TTSYNIIIYSLCRLGKVKEA 277
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
L +M + P SY++++ GE+++ +K + +M K + TY +++
Sbjct: 278 HRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILL 337
Query: 370 ICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+C+ G++ EA K+L+E+ ++ +I D YT L+
Sbjct: 338 LCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN+++ +A + +A+ K MK P +Y + A+ G
Sbjct: 505 IYNSMVNGICKAGNIEQAI---KLMKEMEVAGIDPDAITYTTVIDAYCRLGD-------- 553
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
++ L ++M++ G++P + + N ++ G+ + + D R+ M G+V P++
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV----PDAI 609
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ L+ C + ++ M+ +G P S +YN L+ ++E EM
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM 669
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
IEK +Y ++ ++ + EA +L +E++ L+ DG Y +D+
Sbjct: 670 IEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDM 722
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 13/237 (5%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E + V+ +M++ +Y T+I+ F KL K+ + + P +Y
Sbjct: 346 EAEKVLREMMSQ-KIIPDNVVYTTLIHGFF---KLGHVRTANKWFDEMLSKKISPDYITY 401
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
L F GK + LF +M++ G++PD + ++I Y + + +A
Sbjct: 402 TTLIQGFGQGGKVIEPQN--------LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAF 453
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+ ++M V PN +Y LI GLC G A EL DEM++KG + YNS+V+
Sbjct: 454 SLHNEM-VQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNG 512
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ G +E+ +K + EM D ITY TV+D CR G +A KLL+E+ ++ L
Sbjct: 513 ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 14/267 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + + G E ++ ++M++ E Y T+I + +A ++ A
Sbjct: 397 DYITYTTLIQGFGQGGKVIEPQNLFHEMISR-GLKPDEVTYTTLIDVYCKAGEMVNA--- 452
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F + P+I +Y L G+ ++T L +M G++ ++
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGE--------LDTANELLDEMRKKGLQLNVC 504
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
NSM+ G + ++ A+++ +M V P++ +Y +I C G A +L E
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVA-GIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +G P+ ++N L++ + G +E+ + L M+EK D ITY T++ + C R
Sbjct: 564 MLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNS 623
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
K+ K ++N+ + D TY L+
Sbjct: 624 MNTTTKIYKRMRNQGVAPDSNTYNILI 650
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 10/192 (5%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
SYNI+ + GK ++ L QM PD+ S +++I GY +
Sbjct: 260 SYNIIIYSLCRLGK--------VKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKK 311
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
AL++ M + PN ++Y+ +I LC G++ A ++ EM + +P + Y +L+
Sbjct: 312 ALKLMDDMQI-KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
G V K EM+ K+ D+ITY T++ + G+ E L E+ ++ L
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430
Query: 392 IDGYTYTKLLDV 403
D TYT L+DV
Sbjct: 431 PDEVTYTTLIDV 442
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 213 SYNILFT-----AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
SY ++ T AFLSR N E I K GI + S N +I
Sbjct: 218 SYGLVVTVDSCNAFLSRIANNS------EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRL 271
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V +A R+ QM + P+ SY +I G C G K A +L D+M+ KG P+ +
Sbjct: 272 GKVKEAHRLLMQMDF-RSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYT 330
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YNS++ L G+ E K L EM+ ++ D + Y T++ + G A K E+
Sbjct: 331 YNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEML 390
Query: 388 NKNLIDGY-TYTKLL 401
+K + Y TYT L+
Sbjct: 391 SKKISPDYITYTTLI 405
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 106/213 (49%), Gaps = 22/213 (10%)
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
R +Y +KY P+ +++I F + G ++ R L ++++ G+
Sbjct: 178 RLIYTYKYWG--------PNPIAFDIFFQVLVEIG--------HLSEARKLLDKLLSYGL 221
Query: 251 EPDIFSLNSMIKGYIL-SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ S N+ + S + A+++F + G+ +N + SY+ +I+ LC G+ K A
Sbjct: 222 VVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWN----TTSYNIIIYSLCRLGKVKEA 277
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
L +M + P SY++++ GE+++ +K + +M K + TY +++
Sbjct: 278 HRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILL 337
Query: 370 ICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+C+ G++ EA K+L+E+ ++ +I D YT L+
Sbjct: 338 LCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 104/233 (44%), Gaps = 19/233 (8%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN+++ +A + +A+ K MK P +Y + A+ G
Sbjct: 505 IYNSMVNGICKAGNIEQAI---KLMKEMEVAGIDPDAITYTTVIDAYCRLGD-------- 553
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
++ L ++M++ G++P + + N ++ G+ + + D R+ M G+V P++
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV----PDAI 609
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ L+ C + ++ M+ +G P S +YN L+ ++E EM
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM 669
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
IEK +Y ++ ++ + EA +L +E++ L+ DG Y +D+
Sbjct: 670 IEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDM 722
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I + + +A + + M + R L+ P++ ++N+L F G +
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLD-RGLQ--PTVVTFNVLMNGFCMLG--------ML 589
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
E L M+ GI PD + N+++K + + N +N +I+ +M GV P+S +
Sbjct: 590 EDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA----PDSNT 645
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI G C K A L EM KG+VP+ SYN+L+ ++ E + EM
Sbjct: 646 YNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMR 705
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
D Y +D G + L E K L++
Sbjct: 706 GHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEKCLLN 746
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPS----AVSYNTLMNGYIRLGVLDEGFRLKSAMLAS--- 206
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 207 GVQPDVYTYSVLINGLSKESK--------MDDADELFDEMLVKGLVPNGVTFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A +L D+M RKG P
Sbjct: 259 KNGRVDLAMEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLNPDTGTYTMIIN 395
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 115/284 (40%), Gaps = 35/284 (12%)
Query: 123 LFNWASK--QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
F W S FRH +Y M L +M+ E ++ +++ A++ I+
Sbjct: 3 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAIL 62
Query: 181 YFFAEARKLSRA-VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
E + R+ +YVF + L TA+L G + I
Sbjct: 63 ----ETKGTQRSDIYVF------------------SGLITAYLESG-------FLRDAIE 93
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
C + P F + Y++ + F++ + Y + + ++ L+H
Sbjct: 94 CYRLTREHKLWVP--FDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHR 151
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
C G + A+ + D + + G PS+ SYN+L++ G ++E + M+ D
Sbjct: 152 FCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPD 211
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
TY +++ + + + +A +L E+ K L+ +G T+T L+D
Sbjct: 212 VYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLID 255
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 105/196 (53%), Gaps = 10/196 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + +Y++L K N LF +M++ G+ P+ + ++I G+ +
Sbjct: 203 QPDVYTYSVLINGLCKESKMNEAND--------LFNEMLDKGLVPNGVTFTTLIDGHCKN 254
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ A+ + QM + +LP+ +Y+ LI+GLC +G K A++L DEM+ KG P +
Sbjct: 255 GKVDSAMETYKQM-LSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKIT 313
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L+ G+++ + M+++ +D + Y ++ +C+ GRA +A K+L+E+
Sbjct: 314 YTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREML 373
Query: 388 NKNL-IDGYTYTKLLD 402
+ L D TYT +++
Sbjct: 374 SVGLKPDNGTYTMIIN 389
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 58/230 (25%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G+ +
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGE--------I 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI---FHQMGVVYNYLPNSFS 292
+ +F + G+ P + S N+++ GYI ++ ++ H GV P+ ++
Sbjct: 153 WIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQ----PDVYT 208
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+GLC + + A +L +EM KG VP NG
Sbjct: 209 YSVLINGLCKESKMNEANDLFNEMLDKGLVP--------------NG------------- 241
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+T+ T++D C+ G+ AM+ K++ ++ + D TY L+
Sbjct: 242 --------VTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLI 283
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 82/215 (38%), Gaps = 32/215 (14%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY ++ L E +D+ N+ML + T+I + K+ A+
Sbjct: 205 DVYTYSVLINGLCKESKMNEANDLFNEML-DKGLVPNGVTFTTLIDGHCKNGKVDSAMET 263
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRG-----------------KNTYINHVYMETI 238
+K M + L P + +YN L +G K I + +
Sbjct: 264 YKQMLSQCFL---PDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDG 320
Query: 239 RC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
C L + MV + I D + ++I G DA ++ +M V P
Sbjct: 321 NCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSV-GLKP 379
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
++ +Y +I+ C + K A +L EM+R+G VP
Sbjct: 380 DNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVP 414
>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 148/306 (48%), Gaps = 45/306 (14%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
+DP L LFN +Q F+HD +Y + KL ++ ++ ++ +++ + C E
Sbjct: 463 QDPDDALSLFN-QYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRC-RET 520
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYM--------------------KNSRNLEC------- 207
L+ +I + +++ +AV +F+ M +N R L+
Sbjct: 521 LFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRS 580
Query: 208 ------RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMI 261
R SI S+NI+ +L +G+ + +F++M++ ++P + + NS+I
Sbjct: 581 TKMGFRRNSI-SFNIIIKGWLGKGE--------WDKAWQVFEEMIDKEVKPTVVTFNSLI 631
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
++ A+ + M + + PN+ +Y L+ GLC+ G+ K A+++ +M +G
Sbjct: 632 GFLCGKGDLDGAMGLLEDM-IQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGC 690
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P ++ L+S L G ++++ L EM ++ D +TY +++ +C+ GRA EA K
Sbjct: 691 KPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYK 750
Query: 382 LLKELQ 387
+L E+Q
Sbjct: 751 VLVEMQ 756
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 132/289 (45%), Gaps = 22/289 (7%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRK-LGAA---KMYQEMDDVVNQ 162
L NV+ + L + +F+ ++K FR ++ +++I+ + LG K +Q ++++++
Sbjct: 560 LLNVLVENDRFLDAIGIFDRSTKM-GFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDK 618
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
+ T +N++I F L A+ + + M R+ RP+ +Y +L
Sbjct: 619 EVKP-----TVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRH---RPNAVTYALLMEGLC 670
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV 282
S GK Y E + +F M G +P + + ++ ++D+ + +M
Sbjct: 671 SLGK-------YKEAKKMMF-DMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEMKR 722
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+ P+ +Y+ LI+ LC +GR A ++ EM+ G P++ +Y +V + E
Sbjct: 723 -RRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFE 781
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+K L M+ ++ ++ + + G+ A +L+E++ + +
Sbjct: 782 GGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKM 830
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I+ Y S A+ +F +M +N S++ L++ L R +A + D +
Sbjct: 524 ALIQHYGKSQMPEKAVELFQRM-PSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTK 582
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
GF +S S+N ++ GE ++ + EMI+K+ +T+ +++ +C +G
Sbjct: 583 MGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDG 642
Query: 379 AMKLLKEL-QNKNLIDGYTYTKLLDVL 404
AM LL+++ Q ++ + TY L++ L
Sbjct: 643 AMGLLEDMIQKRHRPNAVTYALLMEGL 669
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 15/270 (5%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA K+ F+HD STY + R L A++Y EM + +++ + A+ +
Sbjct: 108 VKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSE 167
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
++ A+ +S+A+ VF K + C+P+ +YN + + G++ ++ VY E
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRK---CKPTSSTYNSVILMLMQEGQHEKVHEVYTE-- 222
Query: 239 RCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYL 296
M N+G PD + +++I Y + A+R+F +M N + P Y L
Sbjct: 223 ------MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK--DNCMQPTEKIYTTL 274
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ G+ + A +L +EMKR G P+ +Y L+ L G V+E +M+
Sbjct: 275 LGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D + +++ + + GR E + E+
Sbjct: 335 TPDVVFLNNLMNILGKVGRVEELTNVFSEM 364
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 125/300 (41%), Gaps = 55/300 (18%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
S+Y + R A +++ EM D Q TE +Y T++ + + K+ +A+ +F+
Sbjct: 241 SSYEKLGRNDSAIRLFDEMKDNCMQ--------PTEKIYTTLLGIYFKVGKVEKALDLFE 292
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
MK + C P++ +Y L GK ++ Y +K M+ DG+ PD+ L
Sbjct: 293 EMKRAG---CSPTVYTYTELIKGL---GKAGRVDEAY-----GFYKDMLRDGLTPDVVFL 341
Query: 258 NSMIKGYILSNHVNDALRIFHQMG--------VVYNYL---------------------- 287
N+++ V + +F +MG V YN +
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
Query: 288 -----PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
P+ F+Y LI G C R + A L +EM KGF P +Y SL++AL E
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ E+ E V Y ++ + G+ EA+ L E++N+ D Y Y L+
Sbjct: 462 AADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 152 MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMK-NSRNLECRPS 210
+ +EMD+ F A Y ++I +A++ A +FK +K N N+ S
Sbjct: 431 LLEEMDE--------KGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNV----S 478
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
R Y ++ F GK + LF +M N G PD+++ N+++ G + + +
Sbjct: 479 SRVYAVMIKHFGKCGK--------LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 271 NDA---LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
N+A LR + G + S++ +++G G + A E+ + +K G P +
Sbjct: 531 NEANSLLRKMEENGC----RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
YN+L+ A G EE + + EM +K D ITY ++LD +
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 113/301 (37%), Gaps = 52/301 (17%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY + + LG A E ML TP N ++ + ++ V
Sbjct: 305 TYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV----VFLNNLMNILGKVGRVEELTNV 360
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M R C P++ SYN + A + ++ + F +M D + P F
Sbjct: 361 FSEMGMWR---CTPTVVSYNTVIKALFE-------SKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS--------------- 292
+ + +I GY +N V AL + +M Y L N+
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKEL 470
Query: 293 -----------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
Y +I G+ A +L +EMK +G P +YN+L+S + G +
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKL 400
E L +M E D ++ +L+ R G A+++ + +++ + DG TY L
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 401 L 401
L
Sbjct: 591 L 591
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 146/344 (42%), Gaps = 69/344 (20%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F+ D +Y + + L AAK +++++++ +M+ E ++ ++ FF + RA
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM-PNEVTFDMLVRFFCRGGMVERA 304
Query: 193 VYV--------------------------------FKYMKNSRNLECRPSIRSYNILFTA 220
+ V F+++ N + C P SY +
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 364
Query: 221 FLSRG---------------KNTYINHVYMETIRC-------------LFKQMVNDGIEP 252
L R KN N V T C L +QM G E
Sbjct: 365 -LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+I + N+++ G+ + V+ AL +F+ M PN+ +Y L+ GLC R A EL
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAEL 479
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM +K P+ ++N LVS G ++E ++ + +M+E + ITY T+LD I +
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 539
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFGNSIR 413
+ EA++LL L + + D TY+ ++ VL ED +I+
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIK 583
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 19/258 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
DA TY + R L E +++ ML PS Y ++ ++ +A
Sbjct: 144 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV----VTYTVLLEAVCKSTGFGQA 199
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ V M R C P+I +YN++ G+ ++ R ++ + G +P
Sbjct: 200 MEVLDEM---RAKGCTPNIVTYNVIINGMCREGR--------VDDAREFLNRLSSYGFQP 248
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D S +++KG + D +F +M + N +PN ++D L+ C G + A ++
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEM-MEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 307
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++M G ++ N +++ + G V++ + L M D I+Y TVL +CR
Sbjct: 308 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 367
Query: 373 RGRAGEAMKLLKELQNKN 390
R +A +LLKE+ KN
Sbjct: 368 AERWEDAKELLKEMVRKN 385
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G D+F+ N+++ GY ++ A R+ M V P++++Y +I GLC +GR
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA----PDAYTYTPIIRGLCDRGRVGE 163
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L D+M +G PS +Y L+ A+ + + ++ L EM K + +TY +++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+CR GR +A + L L + D +YT +L L
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 18/240 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ A +L A + M +C P++ ++N+L + F +G M
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQK---DCAPNVVTFNVLVSFFCQKG--------LM 508
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
+ L +QM+ G P++ + N+++ G + +AL + H G+V N + P+ +Y
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLH--GLVSNGVSPDIVTYS 566
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I L + R + A ++ ++ G P + YN ++ AL + + M+
Sbjct: 567 SIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN 626
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNSIRH 414
+ +TY T+++ + E LL+EL ++ +++ LL+ F N H
Sbjct: 627 GCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLN----KNLLEEWRPKFSNQTVH 682
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+ ++ I + + +A R+ + P+ + LI LC +GRT +A + +
Sbjct: 47 NARLRRLIARDDLAEAARLVDR-ATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAE 105
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDEICRRGR 375
R G +YN+LV+ G+++ + + M PV D TY ++ +C RGR
Sbjct: 106 RSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM-----PVAPDAYTYTPIIRGLCDRGR 160
Query: 376 AGEAMKLLKELQNKNLIDG-YTYTKLLDVL--EDDFGNSI 412
GEA+ LL ++ ++ TYT LL+ + FG ++
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 17/280 (6%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
+DP V L F+W +QP FRHD TY M LG A+ + + ++ QM+ C
Sbjct: 355 QDPSVALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVK--DGCQPNV 412
Query: 175 L-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+ YN +I+ + A L A+ VF M+ + C P +Y L G
Sbjct: 413 VTYNRLIHCYGCANYLKEALNVFNEMQ---EVGCEPDRVTYCTLIDIHAKAG-------- 461
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+++ ++K+M G+ PD F+ + +I + ++ A +F +M V + +PN +Y
Sbjct: 462 FIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEM-VEHGCVPNLVTY 520
Query: 294 DYLIHGLCAQGRT-KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ +I L A+ R + A +L +M+ GF P +Y+ ++ AL G +EE EM
Sbjct: 521 NIMI-ALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQ 579
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+K D Y ++D + G +A + + + N L+
Sbjct: 580 QKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLL 619
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 29/292 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY ++ R A Q D++ +M P T ++YN ++ ++ K+ A+ V
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQ----------- 244
K MK+ C+P + ++N L G+ V E R F
Sbjct: 77 VKNMKDG---ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLING 133
Query: 245 -----------MVNDGI--EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+V G+ PD + N++I G+ S ++ A +M P++F
Sbjct: 134 LSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193
Query: 292 SYDYLIHGLCAQGRTKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y LI+GLC + A EL EM RK S ++N+LV +++ + L
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
M+E D +TY T++D +CR G + LL+++ ++ D TYT L+
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLV 305
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 15/270 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F + TY+ + L +A E V+ M TP YN II+ F ++ ++ RA
Sbjct: 120 FAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPD----TQTYNAIIHGFCKSGEIDRA 175
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ MK C P +Y+IL + + E I
Sbjct: 176 YGFLEEMKQRAG--CSPDTFTYSILINGLCKSSNLRKADELLQEMIG-------RKDCCA 226
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + N+++ GY + ++ A + M + + P+ +Y +I GLC G L
Sbjct: 227 SVVAFNTLVDGYCKAQDLDRARELLSSM-LEHGCAPDVVTYSTIIDGLCRCGDVDKGFAL 285
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++M +G P +Y LV+ L G++ E + + M+E + +TY V D +C+
Sbjct: 286 LEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ A LL +++K I D + LL
Sbjct: 346 IDKLDMANDLLTSIRDKGRITDVVAFEALL 375
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN I EA +L AV + M+ P + +YN L + H
Sbjct: 225 YNIWIRGLCEAGRLPEAVRLVDGMRAY----AVPDVVTYNTLIRGLCKKSMPQEAMH--- 277
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++M+N G PD F+ N++I GY + V +A + V ++P+ +Y
Sbjct: 278 -----YLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD-AVFKGFVPDQVTYCS 331
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLCA+G + A EL +E + KG P YNSLV L L G + ++ + EM E+
Sbjct: 332 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 391
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLD 402
D TY V++ +C+ G +A ++ + K L D +T+ L+D
Sbjct: 392 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 439
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 14/267 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + M QE +++ + F + Y ++I + RA+ +
Sbjct: 290 DDFTYNTIIDGYCKISMVQEATELLKDAVFK-GFVPDQVTYCSLINGLCAEGDVERALEL 348
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F ++ +P I YN L +G I H + +M +G PDI
Sbjct: 349 FN---EAQAKGIKPDIVVYNSLVKGLCLQG---LILHALQ-----VMNEMAEEGCHPDIQ 397
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N +I G +++DA + + ++ YLP+ F+++ LI G C + + +A +L +
Sbjct: 398 TYNIVINGLCKMGNISDATVVMND-AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVER 456
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G P + +YNS+++ L G+V E + EMI K + ITY +++ CR +
Sbjct: 457 MWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK 516
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLL 401
EA K++ ++ + L D ++ L+
Sbjct: 517 MEEASKVIVKMSQEGLHPDAVSFNTLI 543
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
++ + M C P I++YNI+ G + + + G P
Sbjct: 378 LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN--------ISDATVVMNDAIMKGYLP 429
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+F+ N++I GY ++ AL++ +M Y P++ +Y+ +++GLC G+ E
Sbjct: 430 DVFTFNTLIDGYCKRLKLDSALQLVERMWE-YGIAPDTITYNSVLNGLCKAGKVNEVNET 488
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM KG P+ +YN L+ + ++EE K + +M ++ D +++ T++ CR
Sbjct: 489 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 548
Query: 373 RGRAGEAMKLLKELQNKNLIDGYTYT 398
G A L ++L+ K GY+ T
Sbjct: 549 NGDLEGAYLLFQKLEEK----GYSAT 570
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 21/246 (8%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LY I +A A +L AV F+ M C P+ +YN + A + + + VY
Sbjct: 53 LYVASIRAYARAGRLRDAVDAFERMDL---FACPPAAPAYNAIMDALVDAAYHDQAHKVY 109
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN--SFS 292
+ +M+ G+ PD+ + ++ + L+ + ALR+ LP+ + +
Sbjct: 110 V--------RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRA-------LPHRGAVA 154
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y ++ GL A G T +AR+L D+M P+ ++N ++ AL G+V E L ++I
Sbjct: 155 YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVI 214
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL-EDDFGNS 411
++ ++ TY + +C GR EA++L+ ++ + D TY L+ L +
Sbjct: 215 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQE 274
Query: 412 IRHHLR 417
H+LR
Sbjct: 275 AMHYLR 280
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I + + KL A+ + + M P +YN + GK +N
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERM---WEYGIAPDTITYNSVLNGLCKAGKVNEVNET-- 488
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F++M+ G P+ + N +I+ + SN + +A ++ +M P++ S++
Sbjct: 489 ------FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ-EGLHPDAVSFNT 541
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA--LNGEVEETVKNLWEMIE 353
LI+G C G + A L +++ KG+ ++ ++N+L+ A + LN + E + + EM+
Sbjct: 542 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFD--EMLS 599
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
K D TYR ++D C+ A L E+ K I
Sbjct: 600 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFI 638
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 12/208 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ +A K++ F+ M C P+ +YNIL F K M
Sbjct: 469 YNSVLNGLCKAGKVNEVNETFQEMILKG---CHPNPITYNILIENFCRSNK--------M 517
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +M +G+ PD S N++I G+ + + A +F ++ Y + +++
Sbjct: 518 EEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE-KGYSATADTFNT 576
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI + A ++ DEM KG S +Y L+ V+ +L EMI+K
Sbjct: 577 LIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG 636
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL 383
T+ V++ + R +A+ ++
Sbjct: 637 FIPSMSTFGRVINSLTVNHRVFQAVGII 664
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 15/219 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D TY+ + L A E+++ +M+ C + YN +I F + K+ A
Sbjct: 465 DTITYNSVLNGLCKAGKVNEVNETFQEMIL--KGCHPNPITYNILIENFCRSNKMEEASK 522
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
V M P S+N L F G +E LF+++ G
Sbjct: 523 VIVKMSQEG---LHPDAVSFNTLIYGFCRNGD--------LEGAYLLFQKLEEKGYSATA 571
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N++I + +++ A +IF +M + + +S++Y LI G C A
Sbjct: 572 DTFNTLIGAFSGKLNMHMAEKIFDEM-LSKGHRADSYTYRVLIDGSCKTANVDRAYMHLV 630
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
EM +KGF+PS ++ ++++L +N V + V + M++
Sbjct: 631 EMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK 669
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 142/327 (43%), Gaps = 32/327 (9%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFR--HDASTYHIMTRKLGAAKMYQEMDDVVNQMLATP 167
V+ + +D V L F W ++ R H+ T + + R L A+ + + + L
Sbjct: 40 VLQVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQ 99
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
YNT+I F +A + RA + MK + P + +++ + A + G
Sbjct: 100 HCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGH---SPDVVTHSSIVQALCNTGNL 156
Query: 228 TYINHVYMETIRC-------------------------LFKQMVNDGIEPDIFSLNSMIK 262
+ + E++ C + ++M GI PD+ + NS+I
Sbjct: 157 SRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLID 216
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
G S + +A ++ M V PN +Y+ LI+G C G T A +L + M + G
Sbjct: 217 GLCKSYRMEEARQLLETM-VKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTH 275
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P ++NSL+S ++++ + L M + + +TY ++ +C GRA EA +L
Sbjct: 276 PDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACEL 335
Query: 383 LKELQNKNLI-DGYTYTKLLDVLEDDF 408
L E+ + ++ D TY L+ + +F
Sbjct: 336 LSEMDGRGILPDIITYNSLIGIFCRNF 362
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 18/272 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D+ ++I+ L A E ++ +M + YN++I ++ ++ A +
Sbjct: 172 DSVLFNILVHGLCKANQLSEARQMIEEM-SERGIVPDVVTYNSLIDGLCKSYRMEEARQL 230
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M + RP++ +YN L + G + L ++M+ G PD+
Sbjct: 231 LETMVKRK---VRPNLVTYNTLIYGYCKTGCTGLAHQ--------LIERMIQSGTHPDVV 279
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM--GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ NS+I G+ + ++ A + H M G+ PN +Y+ LI GLC GR A EL
Sbjct: 280 TFNSLISGFCQKSKIDKACEVLHLMKKGLCA---PNLVTYNVLISGLCDAGRANEACELL 336
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
EM +G +P +YNSL+ N ++E+ + M+E+ D I+Y T+ + +
Sbjct: 337 SEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKS 396
Query: 374 GRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
R EA LL + + I +T+ L++ L
Sbjct: 397 ERFDEAFALLDNMFDAGAIPNLFTFNSLMEGL 428
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 45/239 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N++I F + K+ +A V MK C P++ +YN+L + G+
Sbjct: 281 FNSLISGFCQKSKIDKACEVLHLMKKGL---CAPNLVTYNVLISGLCDAGRANEACE--- 334
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVY--- 284
L +M GI PDI + NS+I + + + A +I + M G+ Y
Sbjct: 335 -----LLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTL 389
Query: 285 -----------------------NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+PN F+++ L+ GLC R AR L M+R G
Sbjct: 390 AVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGC 449
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P++ +Y LV+ L G V++ + L M+ + + T++ + R G+ A+
Sbjct: 450 DPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLAL 508
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 150/339 (44%), Gaps = 60/339 (17%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDAS--TYHIMTR-KLGAAKMYQEMDDVVNQMLATPSFC 170
Q D + L+ +WA Q F HI+TR KL + VVN + T
Sbjct: 58 QFDSSLVLKFLDWARSQQFFSFQCKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDL 117
Query: 171 ------------GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
+ A+++ ++ A +++A+ + K+ + P + SYN +
Sbjct: 118 FQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFM---PGVLSYNAIL 174
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
A + ++ I +FK+MV G+ P++++ N +I+G+ + ++ L F
Sbjct: 175 DAVIRTKQSVKI-------AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFG 227
Query: 279 QMG--------VVYNYL--------------------------PNSFSYDYLIHGLCAQG 304
+M V YN + PN SY+ +I+GLC +G
Sbjct: 228 EMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREG 287
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ K E+ +EM ++ +VP ++N+L++ G + + EM++ + +TY
Sbjct: 288 QMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYT 347
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
T+++ +C+ G AM+ L +++++ L +G TYT L+D
Sbjct: 348 TLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID 386
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 134/281 (47%), Gaps = 18/281 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
+Y+++ L +E +++ +M + + +NT+I + +A+ +
Sbjct: 275 SYNVVINGLCREGQMKETSEILEEM-SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333
Query: 199 M-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
M KN + P++ +Y L + G +N ME QM + G+ P+ +
Sbjct: 334 MVKNGLS----PNVVTYTTLINSMCKAGN---LNRA-ME----FLDQMRDRGLHPNGRTY 381
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
++I G+ + A +I +M V + P +Y+ LI+G C GR ++A L EM
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEM-VENGFTPTIITYNALINGHCILGRMEDASGLLQEMI 440
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
+GF+P SY++++S N E+E+ + EM+ K D TY +++ +C++ R G
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500
Query: 378 EAMKLLKELQNKNL-IDGYTYTKLLDV--LEDDFGNSIRHH 415
E L +E+ + L D TYT L++ +E D ++R H
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I F++ L +A + K M + P+I +YN L G+ M
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEMVENG---FTPTIITYNALINGHCILGR--------M 429
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L ++M+ G PD+ S +++I G+ + + A ++ +M V P+ +Y
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM-VAKGISPDVATYSS 488
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC Q R +L EM G P +Y SL++A + G++++ ++ EMI+K
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMK-LLKELQNKNLIDGYTYTKLLD 402
D +TY +++ ++ R EA + LLK L +++ + TY L+D
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A Y+++I + R+L +F+ M +L P +Y L A+ G
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEM---LSLGLPPDEVTYTSLINAYCIEGD------- 533
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
++ L +M+ G PDI + N +I G+ + +A R+ ++ + +PN +Y
Sbjct: 534 -LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL-LYEESVPNEITY 591
Query: 294 DYLI---------------HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
+ LI G C +G A + + M +KG+ + + YN ++ +
Sbjct: 592 NTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKV 651
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
G +E+ EM+ +T + + G+ E +LL
Sbjct: 652 GNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +TY + + L + E+ D+ +ML+ E Y ++I + L +A+ +
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSL-GLPPDEVTYTSLINAYCIEGDLDKALRL 540
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAF-----LSRGKNTYINHVYMETI--RCLFKQMVND 248
M P I +YN+L F K + +Y E++ + ++++
Sbjct: 541 HDEMIQKG---FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN 597
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
+ S +++KG+ + +N+A R+ M + Y N Y+ +IHG G +
Sbjct: 598 CNNLEFKSALALMKGFCMKGLMNEADRVLESM-LQKGYKLNEEVYNVIIHGHSKVGNIEK 656
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNG-EVE 342
A L EM GF P S + +L +L G EVE
Sbjct: 657 AYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE 691
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 115/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F +A ++ A V MK R E P + +YNIL F RG+ +
Sbjct: 149 YNAVISGFCKADRVDHASKVLDRMK-KRGFE--PDVVTYNILIGNFCGRGR--------L 197
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + Q++ D +P + + +I+ I +++A+++ +M + P+ ++Y+
Sbjct: 198 DLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEM-LSRGLRPDRYTYNV 256
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+++G+C +G A E + + G V +YN L+ L G+ E K + +M+ K
Sbjct: 257 VVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ ITY T++ +CR G+ EA +LK ++ K L DGY+Y L+ L
Sbjct: 317 CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISAL 366
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 19/269 (7%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYV 195
STY+I+ R L ++ + +++ ML C + Y+T+I K+ A V
Sbjct: 286 VSTYNILLRDLLNEGKWEYGEKLMSDMLVKG--CEPNPITYSTLITALCRDGKIDEAKNV 343
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
K MK P SY+ L +A GK ++ M++ G PDI
Sbjct: 344 LKVMKEK---ALAPDGYSYDPLISALCREGK--------VDLAIEFLDDMISGGHLPDIL 392
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S NS++ + + ++AL IF ++G V PN+ SY+ L L + G A + E
Sbjct: 393 SYNSILASLCKNGNADEALNIFEKLGEV-GCPPNAGSYNTLFGALWSSGDKIRALGMILE 451
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR--PVDFITYRTVLDEICRR 373
M G P +YNSL+S L +G V++ ++ L +M E ++ P I+Y TVL +C+
Sbjct: 452 MLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPT-VISYNTVLLGLCKV 510
Query: 374 GRAGEAMKLLKELQNKN-LIDGYTYTKLL 401
R +A+++L + N+ L + TYT L+
Sbjct: 511 QRIIDAIEVLAAMVNEGCLPNETTYTLLI 539
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F +L A+ V + C+P++ +Y IL A +++G +
Sbjct: 184 YNILIGNFCGRGRLDLALRVMDQLLKDN---CKPTVITYTILIEATITQGG--------I 232
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-------GV-VYNYL 287
+ L +M++ G+ PD ++ N ++ G ++ A ++ GV YN L
Sbjct: 233 DEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNIL 292
Query: 288 --------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
PN +Y LI LC G+ A+ + MK K
Sbjct: 293 LRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKAL 352
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P SY+ L+SAL G+V+ ++ L +MI D ++Y ++L +C+ G A EA+
Sbjct: 353 APDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALN 412
Query: 382 LLKEL 386
+ ++L
Sbjct: 413 IFEKL 417
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ MVN G +PD+ +IKG+ + A+++ + + P+ F+Y+ +I G
Sbjct: 99 FLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILE--KHGKPDVFAYNAVISGF 156
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C R +A ++ D MK++GF P +YN L+ G ++ ++ + ++++
Sbjct: 157 CKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTV 216
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTY 397
ITY +++ +G EAMKLL E+ ++ L D YTY
Sbjct: 217 ITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTY 254
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ + L RA F+++ C + +YNIL L+ GK Y
Sbjct: 254 YNVVVNGMCKEGMLDRA---FEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEK--- 307
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMGVVYNYLPNSFS 292
L M+ G EP+ + +++I +++A L++ + + P+ +S
Sbjct: 308 -----LMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALA----PDGYS 358
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
YD LI LC +G+ A E D+M G +P SYNS++++L NG +E + ++
Sbjct: 359 YDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLG 418
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
E P + +Y T+ + G A+ ++ E+ + + D TY L+ L
Sbjct: 419 EVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCL 471
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 13/254 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
R D TY+++ + M + ++++ G + YN ++ K
Sbjct: 247 LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGV-STYNILLRDLLNEGKWE-- 303
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
Y K M + C P+ +Y+ L TA GK ++ + + K M + P
Sbjct: 304 -YGEKLMSDMLVKGCEPNPITYSTLITALCRDGK--------IDEAKNVLKVMKEKALAP 354
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D +S + +I V+ A+ M + +LP+ SY+ ++ LC G A +
Sbjct: 355 DGYSYDPLISALCREGKVDLAIEFLDDM-ISGGHLPDILSYNSILASLCKNGNADEALNI 413
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+++ G P++ SYN+L AL +G+ + + EM+ D ITY +++ +CR
Sbjct: 414 FEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCR 473
Query: 373 RGRAGEAMKLLKEL 386
G +A++LL ++
Sbjct: 474 DGLVDQAIELLVDM 487
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+I+ + A+ +F+ + + C P+ SYN LF A S G
Sbjct: 394 YNSILASLCKNGNADEALNIFEKLGE---VGCPPNAGSYNTLFGALWSSG---------- 440
Query: 236 ETIRCL--FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ IR L +M+++GI+PD + NS+I V+ A+ + M P SY
Sbjct: 441 DKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISY 500
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
+ ++ GLC R +A E+ M +G +P+ +Y L+ + G
Sbjct: 501 NTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAG 546
>gi|356541205|ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Glycine max]
Length = 768
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 126/256 (49%), Gaps = 10/256 (3%)
Query: 147 LGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
L A M E + V ++ F YN I+ F L+ +FK MK
Sbjct: 186 LRKADMRVEFEQVFQRLREKRGFSFDTWGYNVCIHAFGCWGDLATCFALFKEMKGGNKGF 245
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
P + +YN L TA GK ++ +++++ +PD F+ ++I+
Sbjct: 246 VAPDLCTYNSLITALCRLGK--------VDDAITVYEELNGSAHQPDRFTYTNLIQACSK 297
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ + DA+RIF+QM + P++ +Y+ L+ G + A +L ++M ++G PS
Sbjct: 298 TYRMEDAIRIFNQMQS-NGFRPDTLAYNSLLDGHFKATKVMEACQLFEKMVQEGVRPSCW 356
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN L+ L NG E ++ +K + VD ITY V+ ++C+ G+ EA++L++E+
Sbjct: 357 TYNILIHGLFRNGRAEAAYTMFCDLKKKGQFVDGITYSIVVLQLCKEGQLEEALQLVEEM 416
Query: 387 QNKN-LIDGYTYTKLL 401
+++ ++D T T LL
Sbjct: 417 ESRGFVVDLVTITSLL 432
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 215 NILFTAFLSRGKNTYINHVYMETIRC-LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
N + FL++GK ++ C LF+ + G++P ++ NS++ ++ + +A
Sbjct: 566 NTFLSIFLAKGK---------LSLACKLFEIFSDAGVDPVSYTYNSIMSSFVKKGYFAEA 616
Query: 274 LRIFHQMGVVYNYLPNSF-SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
I +MG + P +Y+ +I GL GR A + D + R+G YN+L+
Sbjct: 617 WAILTEMG--EKFCPTDIATYNMIIQGLGKMGRADLASAVLDRLLRQGGYLDIVMYNTLI 674
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+AL ++E K +M D +TY T+++ + GR +A K LK + +
Sbjct: 675 NALGKASRIDEVNKLFEQMRSSGINPDVVTYNTLIEVHSKAGRLKDAYKFLKMMLDAGCS 734
Query: 393 DGYTYTKLLDVL 404
+ LD L
Sbjct: 735 PNHVTDTTLDYL 746
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN I EA +L AV + M+ P + +YN L + H
Sbjct: 224 YNIWIRGLCEAGRLPEAVRLVDGMRAY----AVPDVVTYNTLIRGLCKKSMPQEAMH--- 276
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++M+N G PD F+ N++I GY + V +A + V ++P+ +Y
Sbjct: 277 -----YLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD-AVFKGFVPDQVTYCS 330
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLCA+G + A EL +E + KG P YNSLV L L G + ++ + EM E+
Sbjct: 331 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 390
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLD 402
D TY V++ +C+ G +A ++ + K L D +T+ L+D
Sbjct: 391 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 438
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 14/267 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + M QE +++ + F + Y ++I + RA+ +
Sbjct: 289 DDFTYNTIIDGYCKISMVQEATELLKDAVFK-GFVPDQVTYCSLINGLCAEGDVERALEL 347
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F ++ +P I YN L +G I H + +M +G PDI
Sbjct: 348 FN---EAQAKGIKPDIVVYNSLVKGLCLQG---LILHALQ-----VMNEMAEEGCHPDIQ 396
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N +I G +++DA + + ++ YLP+ F+++ LI G C + + +A +L +
Sbjct: 397 TYNIVINGLCKMGNISDATVVMND-AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVER 455
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G P + +YNS+++ L G+V E + EMI K + ITY +++ CR +
Sbjct: 456 MWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK 515
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLL 401
EA K++ ++ + L D ++ L+
Sbjct: 516 MEEASKVIVKMSQEGLHPDAVSFNTLI 542
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
++ + M C P I++YNI+ G + + + G P
Sbjct: 377 LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN--------ISDATVVMNDAIMKGYLP 428
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+F+ N++I GY ++ AL++ +M Y P++ +Y+ +++GLC G+ E
Sbjct: 429 DVFTFNTLIDGYCKRLKLDSALQLVERMWE-YGIAPDTITYNSVLNGLCKAGKVNEVNET 487
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM KG P+ +YN L+ + ++EE K + +M ++ D +++ T++ CR
Sbjct: 488 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 547
Query: 373 RGRAGEAMKLLKELQNKNLIDGYTYT 398
G A L ++L+ K GY+ T
Sbjct: 548 NGDLEGAYLLFQKLEEK----GYSAT 569
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 21/246 (8%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LY I +A A +L AV F+ M C P+ +YN + A + + + VY
Sbjct: 52 LYVASIRAYARAGRLRDAVDAFERMDL---FACPPAAPAYNAIMDALVDAAYHDQAHKVY 108
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN--SFS 292
+ +M+ G+ PD+ + ++ + L+ + ALR+ LP+ + +
Sbjct: 109 V--------RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRA-------LPHRGAVA 153
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y ++ GL A G T +AR+L D+M P+ ++N ++ AL G+V E L ++I
Sbjct: 154 YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVI 213
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL-EDDFGNS 411
++ ++ TY + +C GR EA++L+ ++ + D TY L+ L +
Sbjct: 214 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQE 273
Query: 412 IRHHLR 417
H+LR
Sbjct: 274 AMHYLR 279
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I + + KL A+ + + M P +YN + GK +N
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERM---WEYGIAPDTITYNSVLNGLCKAGKVNEVNET-- 487
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F++M+ G P+ + N +I+ + SN + +A ++ +M P++ S++
Sbjct: 488 ------FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ-EGLHPDAVSFNT 540
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA--LNGEVEETVKNLWEMIE 353
LI+G C G + A L +++ KG+ ++ ++N+L+ A + LN + E + + EM+
Sbjct: 541 LIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFD--EMLS 598
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
K D TYR ++D C+ A L E+ K I
Sbjct: 599 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFI 637
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 12/208 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ +A K++ F+ M C P+ +YNIL F K M
Sbjct: 468 YNSVLNGLCKAGKVNEVNETFQEMILKG---CHPNPITYNILIENFCRSNK--------M 516
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +M +G+ PD S N++I G+ + + A +F ++ Y + +++
Sbjct: 517 EEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE-KGYSATADTFNT 575
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI + A ++ DEM KG S +Y L+ V+ +L EMI+K
Sbjct: 576 LIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG 635
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL 383
T+ V++ + R +A+ ++
Sbjct: 636 FIPSMSTFGRVINSLTVNHRVFQAVGII 663
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 15/219 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D TY+ + L A E+++ +M+ C + YN +I F + K+ A
Sbjct: 464 DTITYNSVLNGLCKAGKVNEVNETFQEMIL--KGCHPNPITYNILIENFCRSNKMEEASK 521
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
V M P S+N L F G +E LF+++ G
Sbjct: 522 VIVKMSQEG---LHPDAVSFNTLIYGFCRNGD--------LEGAYLLFQKLEEKGYSATA 570
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N++I + +++ A +IF +M + + +S++Y LI G C A
Sbjct: 571 DTFNTLIGAFSGKLNMHMAEKIFDEM-LSKGHRADSYTYRVLIDGSCKTANVDRAYMHLV 629
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
EM +KGF+PS ++ ++++L +N V + V + M++
Sbjct: 630 EMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK 668
>gi|212275340|ref|NP_001130930.1| uncharacterized protein LOC100192035 [Zea mays]
gi|195614146|gb|ACG28903.1| hypothetical protein [Zea mays]
gi|219885707|gb|ACL53228.1| unknown [Zea mays]
gi|413935208|gb|AFW69759.1| hypothetical protein ZEAMMB73_548432 [Zea mays]
Length = 748
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 15/220 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I+ F +K+ AV VF MK P + +YN L A++ G +
Sbjct: 246 YNTLIWGFGLCKKMETAVRVFGDMKGH---GVTPDVTTYNTLLNAWVRAGD--------L 294
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E+ R +F +M +G E + S N MIKGY+ N V +A+ +F +M L ++
Sbjct: 295 ESARKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEK-TFAA 353
Query: 296 LIHGLC-AQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNGEVEETVKNLWEMIE 353
L+ GLC QGR AR+ D+M + P KS + LV+ L G+++ ++ W+ +
Sbjct: 354 LMPGLCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLDGALEVHWKSGQ 413
Query: 354 -KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
K VD Y +++ +C G+ A+++L EL K +
Sbjct: 414 FKHVLVDPRQYGVLMEGLCAGGKCETAIEVLDELMEKGTL 453
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 116/292 (39%), Gaps = 48/292 (16%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
+ L+ F +A ++ F + +T+ ++ L + +M +V + + S E
Sbjct: 119 LALQFFRFAYRRGGFSPEGATFALLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAA 178
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
+I + A AV +F+ M N + + SYN + A L RG+ +Y
Sbjct: 179 LISAYGRAAIPQEAVKLFRMMPN---IGVPRTALSYNAVLKAILCRGREAMARRIY---- 231
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
M+ DG+ PD+ + N++I G+
Sbjct: 232 ----NAMIADGVAPDVSTYNTLIWGF---------------------------------- 253
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC + T A + +MK G P +YN+L++A G++E K EM +
Sbjct: 254 GLCKKMET--AVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTER 311
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDFG 409
+ ++Y ++ R EA+ L E+ K L + T+ L+ L DD G
Sbjct: 312 NSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALMPGLCDDQG 363
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 12/217 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
L + +I A A + A+ F++ P ++ +L A SR +NH
Sbjct: 103 LVHGVISGAASAGRADLALQFFRFAYRRGGFS--PEGATFALLVPALASR---RMLNHA- 156
Query: 235 METIRCL-FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
RCL M + + PD +L ++I Y + +A+++F M + + SY
Sbjct: 157 ----RCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPNI-GVPRTALSY 211
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ ++ + +GR AR + + M G P +YN+L+ L ++E V+ +M
Sbjct: 212 NAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKG 271
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
D TY T+L+ R G A K+ E+ +
Sbjct: 272 HGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEG 308
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 139/338 (41%), Gaps = 37/338 (10%)
Query: 80 ADSKPALDDTQFRCAVSELPPRFNNEELCNVMTL--QEDPLVCLELFNWASKQPRFRH-- 135
A+++ A+DD R L P+ + L V TL D LE+ +W S Q F+H
Sbjct: 366 AEARKAVDDMAER----RLTPKDKSVFLRLVTTLCKAGDLDGALEV-HWKSGQ--FKHVL 418
Query: 136 -DASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFCGTEA-LYNTIIYFFAEARK 188
D Y ++ L A + +V++++ L +P EA YN +I F
Sbjct: 419 VDPRQYGVLMEGLCAGGKCETAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEFLCSNGS 478
Query: 189 LSRAVYVFK-YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
++A F+ MK + + ++N L G + E + + ++ V
Sbjct: 479 TAKAETFFRQLMKKGVDDKA-----AFNSLIRGHAKEG----VPEAAQEILAIMTRREVP 529
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+P+ +L ++ ++ N DA M + +LP+ + ++ L GR +
Sbjct: 530 --TDPESHAL--LVDSFLKKNEPADAKTALDSM-MQQGHLPSPALFKSVMEALFNDGRVQ 584
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A + M KG + + ++ AL G VEE + + M+E D +L
Sbjct: 585 TASRVMKSMIEKGVTENMDVAHKILEALFTRGHVEEAIGRVNLMVENGCMPDL---DKLL 641
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+C GR EA KL +++ + TY ++L+ L
Sbjct: 642 VGLCDNGRVMEAQKLADFALDRDFDVSFSTYDRVLEAL 679
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 45/302 (14%)
Query: 118 LVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML------------- 164
+ L F WA KQ F+H +Y+++ LG K + + ++V+ M
Sbjct: 137 FLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRETFALI 196
Query: 165 ------------ATPSFCGTEAL--------YNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
A SF E +N ++ ++R + +A VF MK+ R
Sbjct: 197 TRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGR- 255
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+P I+SY IL + +N VY ++M ++G EPD+ + +I +
Sbjct: 256 --FKPDIKSYTILLEGWGQDQNLLKLNEVY--------REMRDEGFEPDVVTFGILINAH 305
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ ++A+R+FH+M N P+ + LI+GL ++ R K A E +++K GF P
Sbjct: 306 CKARKYDEAIRLFHEMEA-KNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPE 364
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ +YN++V A + ++ + + EM + + TY +L + + ++ EA + +
Sbjct: 365 APTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQ 424
Query: 385 EL 386
+
Sbjct: 425 RM 426
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F D T+ I+ A+ Y E + ++M A + + ++ T+I ++L A
Sbjct: 291 FEPDVVTFGILINAHCKARKYDEAIRLFHEMEAK-NIKPSPHVFCTLINGLGSEKRLKEA 349
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ F+ +K S P +YN + A+ K Y + +M G+ P
Sbjct: 350 LEFFEQLKLS---GFAPEAPTYNAVVGAYCWSMKMAYAYR--------MVDEMRKSGVGP 398
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + + ++ I +A +F +M P +YD +I C + R A ++
Sbjct: 399 NSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQI 458
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
DEMK KG +P +++L+++L ++E+ EM++
Sbjct: 459 WDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLD 499
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 187 RKLSRAVYV----FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
+KLS A ++ F++ + + + + SYN+L A GK N ++ L
Sbjct: 130 KKLSNAGFLALSFFRWAEKQKGF--KHTTESYNLLIEAL---GKIKQFNVIWN-----LV 179
Query: 243 KQMVNDGI-EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
M GI + F+L + + Y + V +A+ F +M + + ++ L+ LC
Sbjct: 180 SDMKRKGILSRETFAL--ITRRYARARKVKEAVESFEKMEK-FGFQMGVSDFNRLLDTLC 236
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
K A+E+ D+MK F P KSY L+ + + + + EM ++ D +
Sbjct: 237 KSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVV 296
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
T+ +++ C+ + EA++L E++ KN+
Sbjct: 297 TFGILINAHCKARKYDEAIRLFHEMEAKNI 326
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 13/215 (6%)
Query: 147 LGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
LG+ K +E + Q L F YN ++ + + K++ Y ++ + R
Sbjct: 340 LGSEKRLKEALEFFEQ-LKLSGFAPEAPTYNAVVGAYCWSMKMA---YAYRMVDEMRKSG 395
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
P+ R+Y+I+ + K+ V+ R G EP + + + MI+ +
Sbjct: 396 VGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSR-------EPGCEPTLSTYDIMIRMFCN 448
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V+ A++I+ +M LP + LI+ LC + + ++A EM G P +
Sbjct: 449 EERVDMAIQIWDEMKA-KGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPAT 507
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+++L AL +G ++T + E I+K R +
Sbjct: 508 MFSNLKQALLDDGR-KDTALLMAEKIKKLRKAPLV 541
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 29/292 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY ++ R A Q D++ +M P T ++YN ++ ++ K+ A+ V
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQ----------- 244
K MK+ C+P + ++N L G+ V E R F
Sbjct: 77 VKNMKDG---ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLING 133
Query: 245 -----------MVNDGI--EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+V G+ PD + N++I G+ S ++ A +M P++F
Sbjct: 134 LSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193
Query: 292 SYDYLIHGLCAQGRTKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y LI+GLC + A EL EM RK S ++N+LV +++ + L
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
M+E D +TY T++D +CR G + LL+++ ++ D TYT L+
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLV 305
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 14/260 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F + TY+ + L +A E V+ M TP YN II+ F ++ ++ RA
Sbjct: 120 FAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPD----TQTYNAIIHGFCKSGEIDRA 175
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ MK C P +Y+IL + + E I
Sbjct: 176 YGFLEEMKQRAG--CSPDTFTYSILINGLCKSSNLRKADELLQEMIG-------RKDCCA 226
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + N+++ GY + ++ A + M + + P+ +Y +I GLC G L
Sbjct: 227 SVVAFNTLVDGYCKAQDLDRARELLSSM-LEHGCAPDVVTYSTIIDGLCRCGDVDKGFAL 285
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++M +G P +Y LV+ L G++ E + + M+E + +TY V D +C+
Sbjct: 286 LEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345
Query: 373 RGRAGEAMKLLKELQNKNLI 392
+ A LL +++K +
Sbjct: 346 IDKLDMANDLLTSIRDKGRV 365
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY I+ L + ++ D+++ +M+ C + +NT++ + +A+ L RA +
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAREL 250
Query: 196 FKYMKNSRNLE--CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
M LE C P + +Y+ + G ++ L ++MV+ G +PD
Sbjct: 251 LSSM-----LEHGCAPDVVTYSTIIDGLCRCGD--------VDKGFALLEKMVSRGCKPD 297
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + ++ G + + +A R+ +M + PN+ +Y + GLC + A +L
Sbjct: 298 VVTYTVLVTGLCKAGKMVEACRLVKRM-LEDGCTPNAVTYSLVFDGLCKIDKLDMANDLL 356
Query: 314 DEMKRKGFVPSSKSYNSLV 332
++ KG V ++ +L+
Sbjct: 357 TSIRDKGRVTDVVAFETLL 375
>gi|194690470|gb|ACF79319.1| unknown [Zea mays]
Length = 671
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 15/220 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I+ F +K+ AV VF MK P + +YN L A++ G +
Sbjct: 169 YNTLIWGFGLCKKMETAVRVFGDMKGH---GVTPDVTTYNTLLNAWVRAGD--------L 217
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E+ R +F +M +G E + S N MIKGY+ N V +A+ +F +M L ++
Sbjct: 218 ESARKVFDEMAGEGTERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEK-TFAA 276
Query: 296 LIHGLC-AQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNGEVEETVKNLWEMIE 353
L+ GLC QGR AR+ D+M + P KS + LV+ L G+++ ++ W+ +
Sbjct: 277 LMPGLCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLDGALEVHWKSGQ 336
Query: 354 -KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
K VD Y +++ +C G+ A+++L EL K +
Sbjct: 337 FKHVLVDPRQYGVLMEGLCAGGKCETAIEVLDELMEKGTL 376
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 116/292 (39%), Gaps = 48/292 (16%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
+ L+ F +A ++ F + +T+ ++ L + +M +V + + S E
Sbjct: 42 LALQFFRFAYRRGGFSPEGATFALLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAA 101
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
+I + A AV +F+ M N + + SYN + A L RG+ +Y
Sbjct: 102 LISAYGRAAIPQEAVKLFRMMPN---IGVPRTALSYNAVLKAILCRGREAMARRIY---- 154
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
M+ DG+ PD+ + N++I G+
Sbjct: 155 ----NAMIADGVAPDVSTYNTLIWGF---------------------------------- 176
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC + T A + +MK G P +YN+L++A G++E K EM +
Sbjct: 177 GLCKKMET--AVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTER 234
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDFG 409
+ ++Y ++ R EA+ L E+ K L + T+ L+ L DD G
Sbjct: 235 NSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALMPGLCDDQG 286
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
L + +I A A + A+ F++ R P ++ +L A SR +NH
Sbjct: 26 LVHGVISGAASAGRADLALQFFRFA--YRRGGFSPEGATFALLVPALASR---RMLNHA- 79
Query: 235 METIRCL-FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
RCL M + + PD +L ++I Y + +A+++F M + + SY
Sbjct: 80 ----RCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPNI-GVPRTALSY 134
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ ++ + +GR AR + + M G P +YN+L+ L ++E V+ +M
Sbjct: 135 NAVLKAILCRGREAMARRIYNAMIADGVAPDVSTYNTLIWGFGLCKKMETAVRVFGDMKG 194
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
D TY T+L+ R G A K+ E+ +
Sbjct: 195 HGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEG 231
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 139/338 (41%), Gaps = 37/338 (10%)
Query: 80 ADSKPALDDTQFRCAVSELPPRFNNEELCNVMTL--QEDPLVCLELFNWASKQPRFRH-- 135
A+++ A+DD R L P+ + L V TL D LE+ +W S Q F+H
Sbjct: 289 AEARKAVDDMAER----RLTPKDKSVFLRLVTTLCKAGDLDGALEV-HWKSGQ--FKHVL 341
Query: 136 -DASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFCGTEA-LYNTIIYFFAEARK 188
D Y ++ L A + +V++++ L +P EA YN +I F
Sbjct: 342 VDPRQYGVLMEGLCAGGKCETAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEFLCSNGS 401
Query: 189 LSRAVYVFK-YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
++A F+ MK + + ++N L G + E + + ++ V
Sbjct: 402 TAKAETFFRQLMKKGVDDKA-----AFNSLIRGHAKEG----VPEAAQEILAIMTRREVP 452
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+P+ +L ++ ++ N DA M + +LP+ + ++ L GR +
Sbjct: 453 --TDPESHAL--LVDSFLKKNEPADAKTALDSM-MQQGHLPSPALFKSVMEALFNDGRVQ 507
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A + M KG + + ++ AL G VEE + + M+E D +L
Sbjct: 508 TASRVMKSMIEKGVTENMDVAHKILEALFTRGHVEEAIGRVNLMVENGCMPDL---DKLL 564
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+C GR EA KL +++ + TY ++L+ L
Sbjct: 565 VGLCDNGRVMEAQKLADFALDRDFDVSFSTYDRVLEAL 602
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 143/314 (45%), Gaps = 41/314 (13%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATP--------------S 168
F WA + P F H +YHI+ LG++K + + D ++ M T +
Sbjct: 100 FFLWAKRLPGFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRA 159
Query: 169 FCGTEALYNTIIYFF--------AEARKLSRAVYVF---KYMKNSR------NLECRPSI 211
+C + I F A + + +YV K++K ++ N+E P+
Sbjct: 160 YCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNA 219
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
++Y+IL + G ++ R LF++M G D+ + NS+++ +V+
Sbjct: 220 KTYSILMRGWGDVGDSS--------EARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVD 271
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
+A ++F +MG P++ SY I C +A ++ D M+R VP+ +YN +
Sbjct: 272 EAYKLFREMGS-NGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCI 330
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
V L + +V+E + L EMIE+ D +Y + C +A++L+ ++ +N
Sbjct: 331 VKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENC 390
Query: 392 I-DGYTYTKLLDVL 404
+ D +TY +L +L
Sbjct: 391 MPDRHTYNMVLKML 404
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 21/210 (10%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+++EM N + P C Y+ I + E + A F+ + R
Sbjct: 273 AYKLFREMGS--NGL--APDACS----YSIFIRAYCEVNDIHSA---FQVLDRMRRYNLV 321
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +YN + K+ ++ Y L +M+ G+ PD++S N++ +
Sbjct: 322 PNVFTYNCIVKKLC---KSEKVDEAYQ-----LLDEMIERGVSPDLWSYNAIQAFHCDHC 373
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
VN ALR+ +M N +P+ +Y+ ++ L GR ++ M+ +GF P++ +Y
Sbjct: 374 EVNKALRLISRMEK-ENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTY 432
Query: 329 NSLVSALA-LNGEVEETVKNLWEMIEKQRP 357
+V G++EE K MI+ P
Sbjct: 433 AVMVHGFCKKKGKLEEACKYFEMMIDDGIP 462
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 145/313 (46%), Gaps = 31/313 (9%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTR---KLGAAKMYQEMDDVVNQM 163
LC M +++ L+ E+ K D TY I+ K+G + + D + +
Sbjct: 465 LCEAMKVEKAFLLFQEM-----KSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESV 519
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
+PS Y +++ + + +++ +A +F M ++ C P+ +Y+ L
Sbjct: 520 GCSPSV----VTYTALLHAYLKTKQVPQASDIFHRMVDAG---CAPNTITYSALVDGLCK 572
Query: 224 RGKNTYINHVYMETIRC--------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
G++ VY + I F+ D I P++ + ++I G ++ V DA
Sbjct: 573 AGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 632
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+ M PN YD LI G C G+ NA+E+ M + G++P+ +Y SL+ A+
Sbjct: 633 LLDVMSS-NGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAM 691
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ----NKNL 391
+ ++ +K L +M+E + +TY ++D +CR G +A+KLL ++ N N+
Sbjct: 692 FKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNV 751
Query: 392 IDGYTYTKLLDVL 404
+ TYT L+D L
Sbjct: 752 V---TYTSLIDGL 761
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 27/265 (10%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE---------------ALYNTIIYFF 183
TY + L A Q+ +V +M+ T G++ Y +I
Sbjct: 562 TYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGL 621
Query: 184 AEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK 243
+A K+ A + M ++ C P+ Y+ L F GK V+ +C
Sbjct: 622 CKAHKVVDAQELLDVMSSNG---CEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKC--- 675
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
G P + + S+I ++ A+++ QM + + PN +Y +I GLC
Sbjct: 676 -----GYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQM-LESSCTPNVVTYTAMIDGLCRI 729
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G + A +L M+++G P+ +Y SL+ L +G+V+ +++ +MI + +++TY
Sbjct: 730 GECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTY 789
Query: 364 RTVLDEICRRGRAGEAMKLLKELQN 388
R +++ C G EA LL E++
Sbjct: 790 RVLINHCCAAGLLDEAHSLLSEMKQ 814
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 101/245 (41%), Gaps = 23/245 (9%)
Query: 168 SFCG---TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR 224
S CG T Y ++I + R+L A+ V M S C P++ +Y +
Sbjct: 673 SKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLES---SCTPNVVTYTAMIDGLCRI 729
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
G+ + L M G P++ + S+I G S V+ +L++F QM +
Sbjct: 730 GE--------CQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQM-ITQ 780
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
PN +Y LI+ CA G A L EMK+ + + Y S+V +
Sbjct: 781 GCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIAS-- 838
Query: 345 VKNLWEMIEKQRPVDFI-TYRTVLDEICRRGRAGEAMKLLKEL----QNKNLIDGYTYTK 399
L E +E V Y ++D + GR +A++L KE+ + N+ TYT
Sbjct: 839 -LGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTS 897
Query: 400 LLDVL 404
L+ L
Sbjct: 898 LIQAL 902
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 99/268 (36%), Gaps = 52/268 (19%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
L +I EA A+ ++ R C P++ +Y L FL + + + +
Sbjct: 276 LCTQMISGLMEASLFDEAI---SFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRI- 331
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNY 286
M+N+G P+ NS++ Y + A ++ ++M VVYN
Sbjct: 332 -------ISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNI 384
Query: 287 LPNSFS-----------------YDYLIHG---------------LCAQGRTKNARELCD 314
S Y+ ++ LC G+ A ++
Sbjct: 385 FIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIK 444
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M RKGFVP + +Y+ +++ L +VE+ EM D TY ++D C+ G
Sbjct: 445 LMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVG 504
Query: 375 RAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+A E+++ TYT LL
Sbjct: 505 LIEQARSWFDEMESVGCSPSVVTYTALL 532
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 114/301 (37%), Gaps = 43/301 (14%)
Query: 102 FNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTY-------HIMTRKLGAAKMYQ 154
N+ + V+ P +C+ F WA +Q + H + Y H R ++ +
Sbjct: 102 LNDAVVVAVLRSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLR 161
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E+ + ++L L N I+ ++A+ +K + RPS +Y
Sbjct: 162 EIGEDDREVLGR--------LLNVIVRKCCRHGAWAKALEELGRLK---DFGYRPSGATY 210
Query: 215 NILFTAFLSRGKNTYINHVYME-----------TIRCLFKQMVNDG--------IEPDIF 255
N L + G+ V E T+ C + + +G IE + F
Sbjct: 211 NALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDF 270
Query: 256 SLNS-----MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
L++ MI G + ++ ++A+ H+M + +PN +Y L+ G + + +
Sbjct: 271 KLDTVLCTQMISGLMEASLFDEAISFLHRMR-CNSCIPNVVTYRTLLAGFLKKKQLGWCK 329
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ M +G P+ +NSLV + + K L M P ++ Y + I
Sbjct: 330 RIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSI 389
Query: 371 C 371
C
Sbjct: 390 C 390
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 92/251 (36%), Gaps = 45/251 (17%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+L+N++++ + AR Y +K + C P YNI F + G+
Sbjct: 345 SLFNSLVHSYCNARDYP---YAYKLLNRMAGCGCPPGYVVYNI-FIGSICSGEEL----- 395
Query: 234 YMETIRCLFKQMVNDGIEPDIFSL-----NSMIKGYILSNHVNDA--LRIFHQMG----- 281
PD+ +L M+ + N VN A R MG
Sbjct: 396 ----------------PSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKA 439
Query: 282 -------VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+ ++P++ +Y +I LC + + A L EMK G +P +Y L+ +
Sbjct: 440 FQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDS 499
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-D 393
G +E+ EM +TY +L + + +A + + + +
Sbjct: 500 FCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPN 559
Query: 394 GYTYTKLLDVL 404
TY+ L+D L
Sbjct: 560 TITYSALVDGL 570
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%)
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ C G A E +K G+ PS +YN+LV LA G+++ + EM E
Sbjct: 178 IVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELG 237
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLK 384
D T +C+ GR +A+ +++
Sbjct: 238 FCTDKFTVGCFAQALCKEGRWSDALVMIE 266
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 19/279 (6%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
R D T+ + L E V + M+A + YN ++ +A K+ R
Sbjct: 176 RVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAG-GYVPNVITYNALVNGLCKADKMER 234
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A + + M + P + +Y++L AF K + ++ L M + G
Sbjct: 235 AHAMIESMVDKG---VTPDVITYSVLVDAFC---KASRVDEALE-----LLHGMASRGCT 283
Query: 252 PDIF-----SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
P++ + N +I G + + A +F +M V N P+ ++ LI GLC G+
Sbjct: 284 PNVLVPDKVTFNILIAGACKAGNFEQASALFEEM-VAKNLQPDVMTFGALIDGLCKAGQV 342
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
+ AR++ D M G P+ +YN+LV L +G +EE + L EM+ D ITY ++
Sbjct: 343 EAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSL 402
Query: 367 LDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +CR R +A++L+ EL++ D TY L+D L
Sbjct: 403 VYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL 441
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 17/272 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPS-FCGTEALYNTIIYFFAEARKLSR 191
D TY ++ A E ++++ M + TP+ + +N +I +A +
Sbjct: 250 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQ 309
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A +F+ M ++NL+ P + ++ L G+ +E R + M N G+
Sbjct: 310 ASALFEEMV-AKNLQ--PDVMTFGALIDGLCKAGQ--------VEAARDILDLMGNLGVP 358
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++ + N+++ G S + +A + +M V +P+S +Y L++ LC RT +A +
Sbjct: 359 PNVVTYNALVHGLCKSGRIEEACQFLEEM-VSSGCVPDSITYGSLVYALCRASRTDDALQ 417
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L E+K G+ P + +YN LV L +G+ E+ + L EM+ K D T+ +
Sbjct: 418 LVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLH 477
Query: 372 RRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
R G M+LL+ + K ++ D T + +LD
Sbjct: 478 RSGNLAGTMELLRVVLAKGMLPDATTCSSILD 509
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY+ + L A + ++ M+ TP Y+ ++ F +A ++ A+ +
Sbjct: 218 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDV----ITYSVLVDAFCKASRVDEALEL 273
Query: 196 FKYMKNSRNLECRPSIR-----SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
M SR C P++ ++NIL G E LF++MV +
Sbjct: 274 LHGMA-SRG--CTPNVLVPDKVTFNILIAGACKAGN--------FEQASALFEEMVAKNL 322
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+PD+ + ++I G + V A I MG + PN +Y+ L+HGLC GR + A
Sbjct: 323 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNL-GVPPNVVTYNALVHGLCKSGRIEEAC 381
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ +EM G VP S +Y SLV AL ++ ++ + E+ D +TY ++D +
Sbjct: 382 QFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL 441
Query: 371 CRRGRAGEAMKLLKELQNKN 390
+ G+ +A+ +L+E+ K
Sbjct: 442 WKSGKTEQAITVLEEMVGKG 461
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ YNI+ + G ++ +M DG+ P I + N++I G SN +
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFR-------GEMARDGVAPTIVTYNTIINGLCKSNDL 53
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ +F ++ V + P+ +Y+ LI LC G + AR L +M +G VP+ +Y+
Sbjct: 54 GAGMELFEEL-VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSV 112
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDEICRRGRAGEAMKLLKELQN 388
L++ L G ++E + + EM K V + ITY + LD +C++ EA +L++ L++
Sbjct: 113 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRD 172
Query: 389 KNL---IDGYTYTKLLDVL 404
+L D T++ L+D L
Sbjct: 173 GSLRVSPDTVTFSTLIDGL 191
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 13/252 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D T++I+ L AK D++ ++ Y ++I + +A ++ A+ V
Sbjct: 252 DTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSV 311
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M S RP+ +YN+L N Y + ME+ +++Q++ PD+
Sbjct: 312 YNDMLESGT---RPNTVTYNVLI--------NGYGKALDMESAVRMYRQLILRRCPPDVV 360
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +S+I GY ++DA+RI+ +MG ++ PN +++ +IH LC Q R+ A E
Sbjct: 361 TFSSLIDGYCRCGQLDDAMRIWKEMGQ-HHIQPNVYTFSIIIHSLCKQNRSAEALGFLRE 419
Query: 316 MK-RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+ R P + YN ++ L G+VEE + +M EK D TY ++ C +G
Sbjct: 420 LNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKG 479
Query: 375 RAGEAMKLLKEL 386
R EA+ L ++
Sbjct: 480 RIPEAITLFHKM 491
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 129/297 (43%), Gaps = 31/297 (10%)
Query: 136 DASTYHIMT------RKLGAAKMYQEMDDVVNQMLATPSF------CGTEALYNTIIYFF 183
+ S H++T R A K++ +M D + F C L + +
Sbjct: 111 EQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLL 170
Query: 184 AEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG----KNTYINHVYMETIR 239
+A + R + + Y L R + LF +++ G N V R
Sbjct: 171 TKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCR 230
Query: 240 C--------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVN---DALRIFHQMGVVYNYLP 288
L ++M G PD + N ++ G + VN D LR + GV +P
Sbjct: 231 VGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVC---MP 287
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
N +Y +I G C GR ++A + ++M G P++ +YN L++ ++E V+
Sbjct: 288 NVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMY 347
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
++I ++ P D +T+ +++D CR G+ +AM++ KE+ ++ + YT++ ++ L
Sbjct: 348 RQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSL 404
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 38/190 (20%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS------------------- 290
+ P S + +I S DAL++F QM YLP++
Sbjct: 107 VPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAA 166
Query: 291 ----------------FSYDYLIHGLCAQGRTKNARELCDEMKRKG-FVPSSKSYNSLVS 333
++Y+ L++ L A+GR ++A L + + G + P S+N ++
Sbjct: 167 VTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIK 226
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI- 392
+ G ++ ++ + M E D IT+ ++D +CR + LL+ LQ +
Sbjct: 227 GVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCM 286
Query: 393 -DGYTYTKLL 401
+ TYT ++
Sbjct: 287 PNVVTYTSVI 296
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 45/302 (14%)
Query: 118 LVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML------------- 164
+ L F WA KQ F+H +Y+++ LG K + + ++V+ M
Sbjct: 137 FLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRETFALI 196
Query: 165 ------------ATPSFCGTEAL--------YNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
A SF E +N ++ ++R + +A VF MK+ R
Sbjct: 197 TRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGR- 255
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+P I+SY IL + +N VY ++M ++G EPD+ + +I +
Sbjct: 256 --FKPDIKSYTILLEGWGQDQNLLKLNEVY--------REMRDEGFEPDVVTFGILINAH 305
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ ++A+R+FH+M N P+ + LI+GL ++ R K A E +++K GF P
Sbjct: 306 CKARKYDEAIRLFHEMEA-KNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPE 364
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ +YN++V A + ++ + + EM + + TY +L + + ++ EA + +
Sbjct: 365 APTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQ 424
Query: 385 EL 386
+
Sbjct: 425 RM 426
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 12/221 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F D T+ I+ A+ Y E + ++M A + + ++ T+I ++L A
Sbjct: 291 FEPDVVTFGILINAHCKARKYDEAIRLFHEMEAK-NIKPSPHVFCTLINGLGSEKRLKEA 349
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ F+ +K S P +YN + A+ K Y + +M G+ P
Sbjct: 350 LEFFEQLKLS---GFAPEAPTYNAVVGAYCWSMKMAYAYR--------MVDEMRKSGVGP 398
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + + ++ I +A +F +M P +YD +I C + R A ++
Sbjct: 399 NSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQI 458
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
DEMK KG +P +++L+++L ++E+ EM++
Sbjct: 459 WDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLD 499
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 187 RKLSRAVYV----FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
+KLS A ++ F++ + + + + SYN+L A GK N ++ L
Sbjct: 130 KKLSNAGFLALSFFRWAEKQKGF--KHTTESYNLLIEAL---GKIKQFNVIWN-----LV 179
Query: 243 KQMVNDGI-EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
M GI + F+L + + Y + V +A+ F +M + + ++ L+ LC
Sbjct: 180 SDMKRKGILSRETFAL--ITRRYARARKVKEAVESFEKMEK-FGFQMGVSDFNRLLDTLC 236
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
K A+E+ D+MK F P KSY L+ + + + + EM ++ D +
Sbjct: 237 KSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVV 296
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
T+ +++ C+ + EA++L E++ KN+
Sbjct: 297 TFGILINAHCKARKYDEAIRLFHEMEAKNI 326
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 13/215 (6%)
Query: 147 LGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
LG+ K +E + Q L F YN ++ + + K++ Y ++ + R
Sbjct: 340 LGSEKRLKEALEFFEQ-LKLSGFAPEAPTYNAVVGAYCWSMKMA---YAYRMVDEMRKSG 395
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
P+ R+Y+I+ + K+ V+ R G EP + + + MI+ +
Sbjct: 396 VGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSR-------EPGCEPTLSTYDIMIRMFCN 448
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V+ A++I+ +M LP + LI+ LC + + ++A EM G P +
Sbjct: 449 EERVDMAIQIWDEMKA-KGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPAT 507
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+++L AL +G ++T + E I K R +
Sbjct: 508 MFSNLKQALLDDGR-KDTALLMAEKIXKLRKAPLV 541
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 134/315 (42%), Gaps = 39/315 (12%)
Query: 85 ALDDTQFRCAVSELPP---RFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYH 141
ALD T R + P RF N ++ F WASKQ + H YH
Sbjct: 12 ALDQTGIRISPEIAEPVLRRFENA-----------GMLAYRFFEWASKQRNYVHSVRAYH 60
Query: 142 IMTRKLGAAKMYQEMDDVVNQM-----LATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
M L + YQ + D+VN M L +FC I+ +A A+K+ AVY F
Sbjct: 61 SMIESLAKIRQYQMVWDLVNAMRNKEILNVEAFC-------IIMRKYARAQKVEEAVYTF 113
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M+ +P++ ++N L +A L + KN + + +F M D PD +
Sbjct: 114 NVMEK---YNMKPNVAAFNGLLSA-LCKSKN-------VRKAQEIFDNM-KDQFVPDSKT 161
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
+ +I+G+ + ++ A I+ +M + +P+ +Y ++ LC GR A E+ EM
Sbjct: 162 YSILIEGWGRAPNLPKAREIYREM-IDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEM 220
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
PSS Y+ LV + +E+ V EM D Y ++ C+ +
Sbjct: 221 DYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKM 280
Query: 377 GEAMKLLKELQNKNL 391
++LK++ K +
Sbjct: 281 KNVYRVLKDMDLKGV 295
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 23/257 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQM----LATPSFCGTEALYNTIIYFFAEARKLSR 191
D TY IM L A E ++V +M SF +Y+ +++ + ++
Sbjct: 193 DEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSF-----IYSVLVHTYGVENRIED 247
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
AV F M+ + + + +YN L +AF K M+ + + K M G+
Sbjct: 248 AVSTFLEMERNGVM---ADVAAYNALISAFCKANK--------MKNVYRVLKDMDLKGVN 296
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P+ + N +I I ++A +IF +M V P+ SY +I C + A +
Sbjct: 297 PNSRTCNIIINSLIGRGETDEAFKIFRRMIKVCE--PDVDSYTMIIKMFCGRKELDMALK 354
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ MK+K FVPS +++ L++ L G + L EMIEK T+ + +
Sbjct: 355 IWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLI 414
Query: 372 RRGRAGEAMKLLKELQN 388
+ GR + +K L+E N
Sbjct: 415 KEGRK-DVLKFLQEKMN 430
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 143/329 (43%), Gaps = 43/329 (13%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASK----QPRFR--HDASTYHIMTRKL 147
A + L F E C V+ + LV L+ A K RF+ +D T++I+ R L
Sbjct: 157 ATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 148 ---GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
G A+ E+ V++ P YNT+I F ++ +L++A +FK +K+
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDI----VTYNTLIQGFCKSNELNKASEMFKDVKSGS- 271
Query: 205 LECRPSIRSYNILFTAFLSRGK---------------------------NTYINHVYMET 237
C P + +Y + + + GK + Y M T
Sbjct: 272 -VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ +M++ G PD+ + S+I GY V+ R++ +M PN+F+Y LI
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA-RGMFPNAFTYSILI 389
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
+ LC + R AREL ++ K +P YN ++ G+V E + EM +K+
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D IT+ ++ C +GR EA+ + ++
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 134/329 (40%), Gaps = 46/329 (13%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V L +P + + ++ + RH TY+++TR L A ++ D+ QM
Sbjct: 76 VKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLH----DLAGQMFECMKS 131
Query: 170 CGTEA---LYNTIIYFFAEARKLSRAVYVF------------------------------ 196
G L ++ FAE KL A +
Sbjct: 132 DGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAM 191
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
K + +++NIL GK E L M G EPDI +
Sbjct: 192 KLFDEHLRFQSCNDTKTFNILIRGLCGVGK--------AEKALELLGVMSGFGCEPDIVT 243
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N++I+G+ SN +N A +F + P+ +Y +I G C G+ + A L D+M
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
R G P++ ++N LV A GE+ + +MI D +T+ +++D CR G+
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 377 GEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ +L +E+ + + + +TY+ L++ L
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINAL 392
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 138/304 (45%), Gaps = 49/304 (16%)
Query: 140 YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYM 199
Y+ + + K+ E D+ ++M++ Y+ +I F KL+ A+ +F M
Sbjct: 199 YNTIIDSMCKVKLVNEAFDLYSEMVSK-GISPDVVTYSALISGFCILGKLNDAIGLFNKM 257
Query: 200 KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNS 259
+ E P + +++IL F G+ ++ + + M+ GI+PD+ + S
Sbjct: 258 ISE---EINPDVYTFSILVDGFCKEGR--------VKEAKNVLAMMMKQGIKPDVVTYCS 306
Query: 260 MIKGYILSNHVNDALRIFHQM---GVVYNY------------------------------ 286
++ GY L VN A IF+ M GV N
Sbjct: 307 LMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKN 366
Query: 287 -LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK-SYNSLVSALALNGEVEET 344
+P+ +Y+ LI GLC G+ A +L DEM +G VP K +YNS++ AL N +V++
Sbjct: 367 IIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG-VPHDKITYNSILDALCKNHQVDKA 425
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDV 403
+ L +M ++ D TY ++D +C+ GR +A + ++L K I YTYT ++
Sbjct: 426 IALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQG 485
Query: 404 LEDD 407
D+
Sbjct: 486 FCDN 489
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I + + S A+ + + + +P++ YN T S K +N +
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKL---VQPNVVMYN---TIIDSMCKVKLVNEAFD 217
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L+ +MV+ GI PD+ + +++I G+ + +NDA+ +F++M + P+ +++
Sbjct: 218 -----LYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKM-ISEEINPDVYTFSI 271
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C +GR K A+ + M ++G P +Y SL+ L +V + M +
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ +Y +++ C+ + EAM L KE+ KN+I D TY L+D L
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGL 381
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
++NIL F G + V F ++ G EP+ +L ++IKG L ++
Sbjct: 93 TFNILINCFSQLGHTHFSFSV--------FANILKKGYEPNAITLTTLIKGLCLKGQIHQ 144
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
AL FH V + N Y LI+GLC G+T A +L + K P+ YN+++
Sbjct: 145 ALH-FHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTII 203
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
++ V E EM+ K D +TY ++ C G+ +A+ L ++ ++ +
Sbjct: 204 DSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEIN 263
Query: 392 IDGYTYTKLLD 402
D YT++ L+D
Sbjct: 264 PDVYTFSILVD 274
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + +K+ A+ +FK M + +N+ P + +YN L GK +Y
Sbjct: 339 YNIMINGFCKIKKVDEAMNLFKEM-HCKNI--IPDVVTYNSLIDGLCKSGKISYALK--- 392
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
L +M + G+ D + NS++ ++ V+ A+ + +M G+ P+ ++
Sbjct: 393 -----LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQ----PDMYT 443
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC GR K+A+ + +++ KG+ + +Y ++ N ++ + L +M
Sbjct: 444 YTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKME 503
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY 395
+ + TY ++ + + A KLL+E+ + L+ G+
Sbjct: 504 DNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLLFGW 546
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I +A ++S+AV + + MK +R C P + +Y IL K V
Sbjct: 194 YSVLIDGLCKANRVSQAVELLESMK-ARG--CSPDVITYTILVDGLCKESKVAAAWEV-- 248
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++M++ G P++ + NS++ G + V+DAL + M PN +Y
Sbjct: 249 ------LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM-TCRGCTPNVVTYGT 301
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC GR K+A + +M KG P YN L++ L +V+E++ L +
Sbjct: 302 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +TY +V+ +CR R EA +LL ++++ D Y+ L+D L
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 411
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 117/238 (49%), Gaps = 22/238 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++IY + +L A + Y+K SR C P + Y+ L GK ++ +
Sbjct: 369 YSSVIYGLCRSNRLDEACRLLLYVK-SRG--CPPDVILYSTLIDGLCKAGK---VDEAFD 422
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L++ M DG + D+ + +++I G + V++A + +M V P++ +Y+
Sbjct: 423 -----LYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARM-VRMGTPPSTMTYNS 476
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC A EL +EM+R PS+ +YN L+ + V+ V L + K
Sbjct: 477 LIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQ--AKA 534
Query: 356 RPV-------DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLE 405
R V D I Y +++D +C+ GR EA+ +E+ + +I D TY+ LL+ L+
Sbjct: 535 RCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLK 592
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 18/237 (7%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+Y ++ + ++L +A+ + M R+ C P++ +YN L +
Sbjct: 81 IYTALLSGLWKEKRLDQALAILHEM---RDHGCEPNVVTYNSLIDGLCKNNEPDRAQE-- 135
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------GVVYNYLP 288
LF+ M + P + + N+++ G + + A+ +F +M + P
Sbjct: 136 ------LFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSP 189
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
N +Y LI GLC R A EL + MK +G P +Y LV L +V + L
Sbjct: 190 NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVL 249
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
EM++ + +TY ++L +CR R +A+ L++++ + + TY L+D L
Sbjct: 250 REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 50/240 (20%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C+P + +Y L F G+ + RC F +M + + P++F + +I G
Sbjct: 5 CQPDVYTYAALLRGFCRGGEID-------QAQRC-FDEMRSKNLVPNVFLCSILIDGLCK 56
Query: 267 SNHVNDALRIFHQM--------GVVYNYL--------------------------PNSFS 292
+ DALR F M V+Y L PN +
Sbjct: 57 AKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVT 116
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI GLC A+EL + MK PS +YN+L+ L G++E + EM+
Sbjct: 117 YNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEML 176
Query: 353 EKQR-------PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+++ + ITY ++D +C+ R +A++LL+ ++ + D TYT L+D L
Sbjct: 177 DRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGL 236
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 50/208 (24%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LY+T+I +A K+ A +++ M C + +Y+ L G+ ++ +
Sbjct: 403 LYSTLIDGLCKAGKVDEAFDLYEVMAGD---GCDADVVTYSTLIDGLCKAGR---VDEAH 456
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNY 286
+ L +MV G P + NS+IKG NH+++A+ + +M V YN
Sbjct: 457 L-----LLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNI 511
Query: 287 LP-------------------------------NSFSYDYLIHGLCAQGRTKNARELCDE 315
L ++ +Y LI GLC GR A + E
Sbjct: 512 LIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQE 571
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEE 343
M G +P +Y+ L+ L + ++ E
Sbjct: 572 MIDNGVIPDHITYSILLEGLKKSKDLHE 599
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 21/234 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLE-CRPSIRSYNILFTAFLSRGKNTYINHVY 234
Y+ +I F KL A+ +F N LE +P ++NIL F K
Sbjct: 233 YSALISGFFVVGKLKDAIDLF----NKIILENIKPDGYTFNILVDGFCKDRK-------- 280
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
M+ + +F M+ GI PD+ + NS++ GY L VN A IF+ M GV P+
Sbjct: 281 MKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVN----PDIR 336
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
SY+ LI+G C + A L +EM K +P+ +YNSL+ L+ +G + ++ + +M
Sbjct: 337 SYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM 396
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
++ P + +TY +++D + + + +A+ L+ + +++ + YTYT L+D L
Sbjct: 397 HDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGL 450
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ F + RK+ VF M + P + +YN L + + +
Sbjct: 268 FNILVDGFCKDRKMKEGKTVFAMMMKQGII---PDVVTYNSLMDGYCLVKE--------V 316
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
T + +F M G+ PDI S N +I G+ V+ A+ +F++M N +PN +Y+
Sbjct: 317 NTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHC-KNIIPNVVTYNS 375
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GL GR A +L D+M +G P+ +YNS++ AL +V++ + + + ++
Sbjct: 376 LIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQG 435
Query: 356 RPVDFITYRTVLDEI--------------------CRRGRAGEAMKLLKELQNKNLI-DG 394
TY ++D + C++G EA+ LL ++++ + I +
Sbjct: 436 IQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNA 495
Query: 395 YTYT----KLLDVLEDD 407
TY LLD E+D
Sbjct: 496 VTYEITIRSLLDNNEND 512
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGY----ILSNHVNDALRIFHQMGVVYNYLPNSF 291
T+ L ++M GI+P++F+ N +I + ++ ++ A +FH V + +
Sbjct: 103 HTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAF-LFHDKLVALGFHLDQV 161
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
SY LIHGLC G T+ A +L + K ++ YN+++ + + V + EM
Sbjct: 162 SYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEM 221
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ K + +TY ++ G+ +A+ L ++ +N+ DGYT+ L+D
Sbjct: 222 VSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVD 273
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + +K+ +A+ +F M + +N+ P++ +YN L G+ +Y
Sbjct: 338 YNILINGFCKIKKVDKAMNLFNEM-HCKNI--IPNVVTYNSLIDGLSKSGRISYALQ--- 391
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI---FHQMGV-----VYNYL 287
L QM + G+ P+I + NS+I ++ V+ A+ + F G+ Y L
Sbjct: 392 -----LVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTIL 446
Query: 288 PNSF-----------SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
+ +Y+ +IHG C +G A L +MK +P++ +Y + +L
Sbjct: 447 IDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLL 506
Query: 337 LNGEVEETVKNLWEMIEK 354
N E ++ K EMI +
Sbjct: 507 DNNENDKAEKLFREMITR 524
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
++V G D S ++I G AL + ++ L N+ Y+ +I+G+C
Sbjct: 150 KLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQL-NAVMYNTVIYGMCKD 208
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
+A +L EM KG P+ +Y++L+S + G++++ + ++I + D T+
Sbjct: 209 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTF 268
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
++D C+ + E + + + +I D TY L+D
Sbjct: 269 NILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMD 308
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 20/221 (9%)
Query: 205 LECR--PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
LEC S+ +NIL F G + + +F + G+ P + S N+++
Sbjct: 115 LECGYPASLYFFNILMHRFCKEGD--------IRLAQSVFDAITKWGLRPSVVSFNTLMN 166
Query: 263 GYILSNHVNDALRI---FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
GYI +++ R+ H GV P+ ++Y LI+GLC + + +A EL DEM K
Sbjct: 167 GYIRLGDLDEGFRLKNAMHASGVQ----PDVYTYSVLINGLCKESKMDDANELFDEMLDK 222
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G VP+ ++ +L+ NG V+ ++ +M+ + D ITY T+ +C++G +A
Sbjct: 223 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQA 282
Query: 380 MKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSIRHHLR 417
L+ E+ K L D TYT L+D E D + H R
Sbjct: 283 HDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKR 323
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 20/248 (8%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF--FAEARKLSRAVYVFKYMKNSR 203
K G ++ Q + D + + PS L N I E +L A++
Sbjct: 135 KEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASG------ 188
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G
Sbjct: 189 ---VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLDKGLVPNGVTFTTLIDG 237
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ + V+ A+ I+ QM + + P+ +Y+ L +GLC +G K A +L DEM KG P
Sbjct: 238 HCKNGRVDLAMEIYKQM-LSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKP 296
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+Y +L+ G++E ++ MI++ +D + Y ++ +C+ GR+ +A K+L
Sbjct: 297 DKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKML 356
Query: 384 KELQNKNL 391
+E+ + L
Sbjct: 357 REMLSVGL 364
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I F + + S A + + M + P + +YN L AF+ GK +
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGK-------FF 342
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+ +M+ GI P+ + +SMI G+ N ++ A +F+ M PN +++
Sbjct: 343 EAEE-LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT-KGCSPNLITFNT 400
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C R + EL EM G V + +YN+L+ L G++ + L EMI
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
D +T T+LD +C G+ +A+++ K +Q
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 112/228 (49%), Gaps = 12/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+++ ++S A+ +F M + CRP++ ++ L G+ +
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETT---CRPNVVTFTTLMNGLCREGR-------IV 201
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +M+ DG++P + +++ G AL + +M V + +PN Y
Sbjct: 202 EAV-ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC GR +A+ L EM+ KG P +YNS++ +G + + L EM+E++
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +TY +++ + G+ EA +L E+ + +I + TY+ ++D
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 18/260 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +TY+ + D++ +M+++ C +T++ + KL A+ +
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEM 487
Query: 196 FKYMKNSR-NLEC-------RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
FK M+ S+ +L+ P +++YNIL + ++ GK ++E L+++M +
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK-------FLEAEE-LYEEMPH 539
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI PD + +SMI G + +++A ++F MG ++ PN ++ LI+G C GR
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVD 598
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+ EL EM R+G V ++ +Y +L+ G + + EMI D IT R +L
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Query: 368 DEICRRGRAGEAMKLLKELQ 387
+ + A+ +L++LQ
Sbjct: 659 TGLWSKEELKRAVAMLEKLQ 678
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T+ Y TI+ + A+ + + M+ ++ P++ Y+ + + G+++
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI--IPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ LF +M GI PD+F+ NSMI G+ S +DA ++ +M + P+
Sbjct: 276 N--------LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM-LERKISPDVV 326
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LI+ +G+ A EL DEM +G +P++ +Y+S++ ++ + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
K + IT+ T++D C R + M+LL E+ L+ D TY L+
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 134/308 (43%), Gaps = 42/308 (13%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
+ D TY+ + + E +++ ++ML T Y+++I F + +L
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT-ITYSSMIDGFCKQNRLDA 378
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NT 228
A ++F M C P++ ++N L + + NT
Sbjct: 379 AEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 229 YINHVYM----ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
I+ Y+ L ++M++ G+ PDI + ++++ G + + DAL +F M
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 285 NYL----------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
L P+ +Y+ LI GL +G+ A EL +EM +G VP + +Y+S++
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-D 393
L ++E + M K + +T+ T+++ C+ GR + ++L E+ + ++ +
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615
Query: 394 GYTYTKLL 401
TY L+
Sbjct: 616 AITYITLI 623
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T++ + AK + +++++M T T YNT+I+ F L+ A+ + +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT-YNTLIHGFYLVGDLNAALDLLQE 455
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGK---NTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M +S P I + + L GK + V ++ + L +G+EPD+
Sbjct: 456 MISSGLC---PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ N +I G I +A ++ +M G+V P++ +Y +I GLC Q R A ++
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRGIV----PDTITYSSMIDGLCKQSRLDEATQM 568
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M K F P+ ++ +L++ G V++ ++ EM + + ITY T++ +
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 373 RGRAGEAMKLLKEL 386
G A+ + +E+
Sbjct: 629 VGNINGALDIFQEM 642
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 14/227 (6%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
F E + L A+ +F M SR L PS+ + L + + + +Y
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLMGVVVRMERPDLVISLY-------- 102
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
++M I DI+S +IK + + + AL F ++ P+ +++ L+HGLC
Sbjct: 103 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKI-TKLGLHPDVVTFNTLLHGLCV 161
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ R A L +M P+ ++ +L++ L G + E V L M+E IT
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVLEDD 407
Y T++D +C++G A+ LL++++ + I + Y+ ++D L D
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I F + + S A + + M + P + +YN L AF+ GK +
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGK-------FF 342
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+ +M+ GI P+ + +SMI G+ N ++ A +F+ M PN +++
Sbjct: 343 EAEE-LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT-KGCSPNLITFNT 400
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C R + EL EM G V + +YN+L+ L G++ + L EMI
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
D +T T+LD +C G+ +A+++ K +Q
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 111/228 (48%), Gaps = 12/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+++ ++S A+ +F M + CRP++ ++ L G+ +
Sbjct: 152 FTTLLHGLCVEDRVSEALNLFHQMFETT---CRPNVVTFTTLMNGLCREGR-------IV 201
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +M+ DG++P + +++ G AL + +M V + +PN Y
Sbjct: 202 EAV-ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC GR +A+ L EM+ KG P +YNS++ +G + + L EM+E++
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +TY +++ + G+ EA +L E+ + +I + TY+ ++D
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 18/260 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +TY+ + D++ +M+++ C +T++ + KL A+ +
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEM 487
Query: 196 FKYMKNSR-NLEC-------RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
FK M+ S+ +L+ P +++YNIL + ++ GK ++E L+++M +
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK-------FLEAEE-LYEEMPH 539
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI PD + +SMI G + +++A ++F MG ++ PN ++ LI+G C GR
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVD 598
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+ EL EM R+G V ++ +Y +L+ G + + EMI D IT R +L
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Query: 368 DEICRRGRAGEAMKLLKELQ 387
+ + A+ +L++LQ
Sbjct: 659 TGLWSKEELKRAVAMLEKLQ 678
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T+ Y TI+ + A+ + + M+ ++ P++ Y+ + + G+++
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI--IPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ LF +M GI PD+F+ NSMI G+ S +DA ++ +M + P+
Sbjct: 276 N--------LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM-LERKISPDVV 326
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LI+ +G+ A EL DEM +G +P++ +Y+S++ ++ + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
K + IT+ T++D C R + M+LL E+ L+ D TY L+
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 134/308 (43%), Gaps = 42/308 (13%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
+ D TY+ + + E +++ ++ML T Y+++I F + +L
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT-ITYSSMIDGFCKQNRLDA 378
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NT 228
A ++F M C P++ ++N L + + NT
Sbjct: 379 AEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 229 YINHVYM----ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
I+ Y+ L ++M++ G+ PDI + ++++ G + + DAL +F M
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 285 NYL----------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
L P+ +Y+ LI GL +G+ A EL +EM +G VP + +Y+S++
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-D 393
L ++E + M K + +T+ T+++ C+ GR + ++L E+ + ++ +
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615
Query: 394 GYTYTKLL 401
TY L+
Sbjct: 616 AITYITLI 623
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 14/227 (6%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
F E + L A+ +F M SR L PS+ + L + + + +Y
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLMGVVVRMERPDLVISLY-------- 102
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
++M I DI+S N +IK + + + AL F ++ P+ ++ L+HGLC
Sbjct: 103 QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKI-TKLGLHPDVVTFTTLLHGLCV 161
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ R A L +M P+ ++ +L++ L G + E V L M+E IT
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVLEDD 407
Y T++D +C++G A+ LL++++ + I + Y+ ++D L D
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T++ + AK + +++++M T T YNT+I+ F L+ A+ + +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT-YNTLIHGFYLVGDLNAALDLLQE 455
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGK---NTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M +S P I + + L GK + V ++ + L +G+EPD+
Sbjct: 456 MISSGLC---PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ N +I G I +A ++ +M G+V P++ +Y +I GLC Q R A ++
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRGIV----PDTITYSSMIDGLCKQSRLDEATQM 568
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M K F P+ ++ +L++ G V++ ++ EM + + ITY T++ +
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 373 RGRAGEAMKLLKEL 386
G A+ + +E+
Sbjct: 629 VGNINGALDIFQEM 642
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I F + + S A + + M + P + +YN L AF+ GK +
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGK-------FF 342
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+ +M+ GI P+ + +SMI G+ N ++ A +F+ M PN +++
Sbjct: 343 EAEE-LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT-KGCSPNLITFNT 400
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C R + EL EM G V + +YN+L+ L G++ + L EMI
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
D +T T+LD +C G+ +A+++ K +Q
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 112/228 (49%), Gaps = 12/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+++ ++S A+ +F M + CRP++ ++ L G+ +
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETT---CRPNVVTFTTLMNGLCREGR-------IV 201
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +M+ DG++P + +++ G AL + +M V + +PN Y
Sbjct: 202 EAV-ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC GR +A+ L EM+ KG P +YNS++ +G + + L EM+E++
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +TY +++ + G+ EA +L E+ + +I + TY+ ++D
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 18/260 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +TY+ + D++ +M+++ C +T++ + KL A+ +
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEM 487
Query: 196 FKYMKNSR-NLEC-------RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
FK M+ S+ +L+ P +++YNIL + ++ GK ++E L+++M +
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK-------FLEAEE-LYEEMPH 539
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI PD + +SMI G + +++A ++F MG ++ PN ++ LI+G C GR
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVD 598
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+ EL EM R+G V ++ +Y +L+ G + + EMI D IT R +L
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Query: 368 DEICRRGRAGEAMKLLKELQ 387
+ + A+ +L++LQ
Sbjct: 659 TGLWSKEELKRAVAMLEKLQ 678
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T+ Y TI+ + A+ + + M+ ++ P++ Y+ + + G+++
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI--IPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ LF +M GI PD+F+ NSMI G+ S +DA ++ +M + P+
Sbjct: 276 N--------LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM-LERKISPDVV 326
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LI+ +G+ A EL DEM +G +P++ +Y+S++ ++ + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
K + IT+ T++D C R + M+LL E+ L+ D TY L+
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 134/308 (43%), Gaps = 42/308 (13%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
+ D TY+ + + E +++ ++ML T Y+++I F + +L
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT-ITYSSMIDGFCKQNRLDA 378
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NT 228
A ++F M C P++ ++N L + + NT
Sbjct: 379 AEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 229 YINHVYM----ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
I+ Y+ L ++M++ G+ PDI + ++++ G + + DAL +F M
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 285 NYL----------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
L P+ +Y+ LI GL +G+ A EL +EM +G VP + +Y+S++
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-D 393
L ++E + M K + +T+ T+++ C+ GR + ++L E+ + ++ +
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615
Query: 394 GYTYTKLL 401
TY L+
Sbjct: 616 AITYITLI 623
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T++ + AK + +++++M T T YNT+I+ F L+ A+ + +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT-YNTLIHGFYLVGDLNAALDLLQE 455
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGK---NTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M +S P I + + L GK + V ++ + L +G+EPD+
Sbjct: 456 MISSGLC---PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ N +I G I +A ++ +M G+V P++ +Y +I GLC Q R A ++
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRGIV----PDTITYSSMIDGLCKQSRLDEATQM 568
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M K F P+ ++ +L++ G V++ ++ EM + + ITY T++ +
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 373 RGRAGEAMKLLKEL 386
G A+ + +E+
Sbjct: 629 VGNINGALDIFQEM 642
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 14/227 (6%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
F E + L A+ +F M SR L PS+ + L + + + +Y
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLMGVVVRMERPDLVISLY-------- 102
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
++M I DI+S +IK + + + AL F ++ P+ +++ L+HGLC
Sbjct: 103 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKL-TKLGLHPDVVTFNTLLHGLCV 161
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ R A L +M P+ ++ +L++ L G + E V L M+E IT
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVLEDD 407
Y T++D +C++G A+ LL++++ + I + Y+ ++D L D
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 143/329 (43%), Gaps = 43/329 (13%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASK----QPRFR--HDASTYHIMTRKL 147
A + L F E C V+ + LV L+ A K RF+ +D T++I+ R L
Sbjct: 157 ATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 148 ---GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
G A+ E+ V++ P YNT+I F ++ +L++A +FK +K+
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDI----VTYNTLIQGFCKSNELNKASEMFKDVKSGS- 271
Query: 205 LECRPSIRSYNILFTAFLSRGK---------------------------NTYINHVYMET 237
C P + +Y + + + GK + Y M T
Sbjct: 272 -VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ +M++ G PD+ + S+I GY V+ R++ +M PN+F+Y LI
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA-RGMFPNAFTYSILI 389
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
+ LC + R AREL ++ K +P YN ++ G+V E + EM +K+
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D IT+ ++ C +GR EA+ + ++
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 134/329 (40%), Gaps = 46/329 (13%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V L +P + + ++ + RH TY+++TR L A ++ D+ QM
Sbjct: 76 VKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLH----DLAGQMFECMKS 131
Query: 170 CGTEA---LYNTIIYFFAEARKLSRAVYVF------------------------------ 196
G L ++ FAE KL A +
Sbjct: 132 DGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAM 191
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
K + +++NIL GK E L M G EPDI +
Sbjct: 192 KLFDEHLRFQSCNDTKTFNILIRGLCGVGK--------AEKALELLGVMSGFGCEPDIVT 243
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N++I+G+ SN +N A +F + P+ +Y +I G C G+ + A L D+M
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
R G P++ ++N LV A GE+ + +MI D +T+ +++D CR G+
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 377 GEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ +L +E+ + + + +TY+ L++ L
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINAL 392
>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 484
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 136/296 (45%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ ++ L+ F W + F H+ T+H + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHGAKNXEHALQFFRWVERSNLFEHNRETHHKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E L+ +I + +A + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDLWVLLIDSYGKAGIVQESVKLFQKMEE---LGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF L RG+ YM R F +M+++G EP + N MI G+ LS V A
Sbjct: 118 YDALFKVILRRGR-------YMMAKR-YFNKMLSEGNEPTRHTFNIMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M +P+ +Y+ +I G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMKS-REIMPDVVTYNTMIXGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
V++ ++ + EM + ITY T+L +C + EA +LKE+ K
Sbjct: 229 GYVSVDRVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAQKMSEARSILKEMVEK 284
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D +I Y + V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDLWVLLIDSYGKAGIVQESVKLFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SYD L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYDALFKVILRRGRYMMAKRYFNKMLSEGNEPTRHTFNIMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREIMPDVVTYNTMIXGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 12/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F +A ++ A V MK P + ++NI+ F +GK V+
Sbjct: 47 YNAVISGFCKANRIESAKTVLDRMKRKG---FSPDVVTHNIMIGTFCGKGKIDLALKVFE 103
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E ++ ++ +P + + +I+ YIL +++AL++ +M + P++F+Y+
Sbjct: 104 ELLK-------DNNCKPTLITYTILIEAYILEGGIDEALKLLDEM-LSRGLEPDTFTYNV 155
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+ GLC +G+ A E + +G P +YN L+ AL G+ +E K + E+ +
Sbjct: 156 ITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRG 215
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ +TY ++ +CR G+ E++ L+K ++ K L D Y Y L+
Sbjct: 216 CEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLI 262
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 134/297 (45%), Gaps = 40/297 (13%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKL----GAAKMYQEMDDVVNQMLATPSFCGTEALY 176
L++F K + TY I+ G + + +D+++++ L +F Y
Sbjct: 99 LKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTF-----TY 153
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK----NTYINH 232
N I + K+ RA F++++ + C+P + +YNIL A L++GK +++
Sbjct: 154 NVITRGLCKEGKVDRA---FEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSE 210
Query: 233 VY-----------------------METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
++ +E L K M G+ PD + + +I +
Sbjct: 211 IFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGK 270
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
++ A+ M + +LP+ +Y+ ++ LC G +A E+ ++ G P+ SYN
Sbjct: 271 LDMAIEFLDCM-ICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYN 329
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+++SAL +G+ + + +M+ K D ITY +++ +CR G EA+ LL ++
Sbjct: 330 TMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADM 386
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 20/273 (7%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLS 190
+ D TY+I+ R L + E + ++++ + G E Y+ +I K+
Sbjct: 182 KPDVITYNILLRALLNQGKWDEGEKWMSEIFSR----GCEPNVVTYSILISSLCRDGKIE 237
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+V + K MK P Y+ L AF GK + +E + C M+ DG
Sbjct: 238 ESVNLVKVMKEKG---LTPDAYCYDPLIAAFCREGKL----DMAIEFLDC----MICDGF 286
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
PDI + N+++ + + + A+ IF ++ V PN SY+ ++ L + G A
Sbjct: 287 LPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEV-GCPPNVSSYNTMLSALWSSGDRYRAL 345
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ +M KG P +YNSL+S L +G V+E + L +M+ + + ++Y+TVL +
Sbjct: 346 GMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGL 405
Query: 371 CRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLD 402
C+ R +A+++L + +N + TYT L++
Sbjct: 406 CKAHRIDDAIEVLAAMIENGCQPNETTYTLLIE 438
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 8/157 (5%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY-LPNSFSYDYLIHGLCAQ 303
MV +PD+ +IKG+ S +++ A R+ MG++ + P+ F+Y+ +I G C
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRV---MGILEKHGKPDVFAYNAVISGFCKA 57
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ--RPVDFI 361
R ++A+ + D MKRKGF P ++N ++ G+++ +K E+++ +P I
Sbjct: 58 NRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPT-LI 116
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTY 397
TY +++ G EA+KLL E+ ++ L D +TY
Sbjct: 117 TYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTY 153
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 21/266 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQM----LATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
TY I+ L +E ++V M L ++C Y+ +I F KL A+
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYC-----YDPLIAAFCREGKLDMAIE 276
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
M L P I +YN + A G + + F ++ G P++
Sbjct: 277 FLDCMICDGFL---PDIVNYNTIMAALCKNGNGDHAVEI--------FGKLDEVGCPPNV 325
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
S N+M+ S AL + QM + P+ +Y+ LI LC G A L
Sbjct: 326 SSYNTMLSALWSSGDRYRALGMISQM-LSKGIDPDVITYNSLISCLCRDGMVDEAIGLLA 384
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M F P+ SY +++ L +++ ++ L MIE + TY +++ I G
Sbjct: 385 DMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSG 444
Query: 375 RAGEAMKLLKELQNKNLIDGYTYTKL 400
+AM+L L N I ++ +L
Sbjct: 445 SRTQAMELANSLYIMNAISEDSFKRL 470
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 116/233 (49%), Gaps = 13/233 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y +I+ F EAR++ A+ +F M C P++R+Y ++ A G+ T
Sbjct: 274 EVSYTNLIHGFCEARRVDEALKLFSQMHEDN---CWPTVRTYTVIIFALCQLGRKT---- 326
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
E + +FK+M +P++ + +I ++ +DA +I + M + +P+ +
Sbjct: 327 ---EALN-MFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGM-LEKGLIPSVVT 381
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI G C +G + +A E+ M+ P++++YN L+ + + + L +M+
Sbjct: 382 YNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKML 441
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
E++ + +TY ++ C+ G G A KLL + L+ D +TY+ +D L
Sbjct: 442 ERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTL 494
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 138/344 (40%), Gaps = 58/344 (16%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P + + L DP L FNW ++ F+H+ + H+ + Y
Sbjct: 67 SLKNLIPSIAPSHISALFALNLDPQTALAFFNWIGQKHGFKHNVQS-HVSMLNILVPNGY 125
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
+ + + ++ + AL+ R ++R V FK+ + ++R
Sbjct: 126 LRIAENMRILMIKSTDSSENALF-----VLEMLRSMNRRVDAFKF---------KLTLRC 171
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN+L LSR + ++ ++ ++ +M++D + P+IF+LN+M+ GY +V +A
Sbjct: 172 YNMLLM-LLSR-------FLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEA 223
Query: 274 -------------LRIFHQMGVVYNY---------------------LPNSFSYDYLIHG 299
L F ++ Y L N SY LIHG
Sbjct: 224 ELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHG 283
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
C R A +L +M P+ ++Y ++ AL G E + EM EK +
Sbjct: 284 FCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPN 343
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
TY ++ +C +A K+L + K LI TY L+D
Sbjct: 344 VHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALID 387
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 32/255 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YN +I F + + +A+ + M + +P++ +YNIL G
Sbjct: 417 YNELILGFCRGKNIHKAMSLLHKMLERK---LQPNVVTYNILIHGQCKEGDLGSAYKLLS 473
Query: 227 ---------NTYINHVYMETI---------RCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ + V+++T+ R LF+ + GI+ + +++I GY
Sbjct: 474 LMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVG 533
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V+D + +M + +PNS +Y+ LI G C + K AR L D M ++ P++ +Y
Sbjct: 534 KVSDGRFLLDKM-LSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTY 592
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
L+ L + E ++ +M+ D Y + C GR +A L+ ++
Sbjct: 593 TILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNA 652
Query: 389 KNLI-DGYTYTKLLD 402
K ++ D YT +D
Sbjct: 653 KGIMPDTMLYTLFID 667
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 121/312 (38%), Gaps = 52/312 (16%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
A TY I+ L + + D+ +QML+T S +Y I+ + +L A +
Sbjct: 589 ADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDV-FIYTAFIHAYCSHGRLKDAEVLI 647
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M N++ + P Y + A+ G+ I+ + + K+M G EP ++
Sbjct: 648 CKM-NAKGI--MPDTMLYTLFIDAY---GRFGSIDGAFG-----ILKRMHEVGCEPSYYT 696
Query: 257 LNSMIKGY--------------------ILSNHVNDALR---------IFHQMGVVYNYL 287
+ +IK + SN ++ R +F +M +
Sbjct: 697 YSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAE-HGCA 755
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN+ +Y I GLC G + A L D MK KG P+ YNSL+ G E ++
Sbjct: 756 PNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRW 815
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL----------KELQNKNLIDGYTY 397
L MIE + + + +L + G +A ++ E+ K LIDG
Sbjct: 816 LDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLK 875
Query: 398 TKLLDVLEDDFG 409
L D D FG
Sbjct: 876 KGLSDKCSDLFG 887
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWSLRPSVVS----FNTLMNGYIKLGDLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMIDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 17/228 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K +LEC S+ +NIL +F+ G+ +
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE--------I 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + + P + S N+++ GYI +++ R+ + M P+ ++Y
Sbjct: 153 RLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS-GVQPDVYTYSV 211
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM G VP+ ++ +L+ NG V+ ++ +M+ +
Sbjct: 212 LINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY T++ +C++G +A L+ E+ K L D TYT L+D
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGNCKEGD--------LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G++PS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 142/295 (48%), Gaps = 26/295 (8%)
Query: 118 LVCLELFN--WASKQPRFR--HDASTYH---IMTR--KLGAAKMYQEMDDVVNQMLATPS 168
LV L+ FN WA + + AS Y +M R K G ++ Q + D + + PS
Sbjct: 111 LVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPS 170
Query: 169 FCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
YNT++ + L+ FK +P + +Y++L K
Sbjct: 171 VVS----YNTLMNGYIRLGDLNEG---FKLKSAMHASGVQPDVYTYSVLINGLCKESK-- 221
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
M+ LF++M+ G+ P+ + ++I G+ + V+ A+ ++ QM + + LP
Sbjct: 222 ------MDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQM-LSQSLLP 274
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ +Y+ LI+GLC +G A +L DEM KG P +Y +L+ G+++ ++
Sbjct: 275 DLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHR 334
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
MI++ +D + Y ++ +C+ GR+ +A K+++E+ + L D TYT +++
Sbjct: 335 KRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIIN 389
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 205 LECR--PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
LEC S+ +NIL F G + + +F + G+ P + S N+++
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGD--------IRLAQSVFDAITKWGLRPSVVSYNTLMN 179
Query: 263 GYILSNHVNDALRI---FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
GYI +N+ ++ H GV P+ ++Y LI+GLC + + +A EL +EM K
Sbjct: 180 GYIRLGDLNEGFKLKSAMHASGVQ----PDVYTYSVLINGLCKESKMDDANELFEEMLVK 235
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G VP+ ++ +L+ NG V+ ++ +M+ + D ITY T++ +C++G +A
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQA 295
Query: 380 MKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSIRHHLR 417
L+ E+ K L D TYT L+D E D + H R
Sbjct: 296 HDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKR 336
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
+V QML + S YNT+IY + L++A + M + + L +P +Y L
Sbjct: 262 EVYKQML-SQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
G +T H K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGCCKEGDLDTAFEHR---------KRMIQENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M + + P++ +Y +I+ C +G +L EM+R G PS
Sbjct: 369 MREM-LSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPS 415
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 120/223 (53%), Gaps = 17/223 (7%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K AV +F+ M SR L P++ +N LF+A +++ K E + L KQM +
Sbjct: 68 KADDAVDLFRDMIQSRPL---PTVIDFNRLFSA-IAKTKQ-------YELVLALCKQMES 116
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV--YNYLPNSFSYDYLIHGLCAQGR 305
GI I++L+ MI + ++ A F MG + Y P++ ++ L++GLC + R
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYA---FSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A EL D M G P+ + N+LV+ L LNG+V + V + M+E + +TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
VL+ +C+ G+ AM+LL++++ +N+ +D Y+ ++D L D
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 109 NVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPS 168
NVM + +EL ++ + DA Y I+ L ++ N+M
Sbjct: 236 NVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKG 293
Query: 169 FCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
F YNT+I F A + + + M + P++ ++++L +F+ GK
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK---ISPNVVTFSVLIDSFVKEGKLR 350
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
+ L K+M+ GI P+ + NS+I G+ N + +A+++ M + P
Sbjct: 351 EADQ--------LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM-ISKGCDP 401
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ +++ LI+G C R + EL EM +G + ++ +YN+LV +G++E K
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
EM+ ++ D ++Y+ +LD +C G +A+++ +++ +
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 116/244 (47%), Gaps = 14/244 (5%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
++++M+ T F E Y ++ ++ + + A+ + + M+ RN++ Y+I+
Sbjct: 215 LIDRMVET-GFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAV--KYSIII 270
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
G ++ LF +M G + DI + N++I G+ + +D ++
Sbjct: 271 DGLCKDGS--------LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
M + PN ++ LI +G+ + A +L EM ++G P++ +YNSL+
Sbjct: 323 DM-IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
+EE ++ + MI K D +T+ +++ C+ R + ++L +E+ + +I + TY
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 398 TKLL 401
L+
Sbjct: 442 NTLV 445
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 46/261 (17%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
+ +I F RKLS Y F M L P +N L + + E
Sbjct: 127 SIMINCFCRCRKLS---YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVS-------E 176
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------------GVVY 284
+ L +MV G +P + +LN+++ G L+ V+DA+ + +M G V
Sbjct: 177 ALE-LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 285 NYLPNS----------------------FSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
N + S Y +I GLC G NA L +EM+ KGF
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
+YN+L+ G ++ K L +MI+++ + +T+ ++D + G+ EA +L
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 383 LKELQNKNLI-DGYTYTKLLD 402
LKE+ + + + TY L+D
Sbjct: 356 LKEMMQRGIAPNTITYNSLID 376
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ II + L A +F M+ + I +YN L F + G+
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIK---GFKADIITYNTLIGGFCNAGR--------W 314
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L + M+ I P++ + + +I ++ + +A ++ +M + PN+ +Y+
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM-MQRGIAPNTITYNS 373
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C + R + A ++ D M KG P ++N L++ +++ ++ EM +
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
+ +TY T++ C+ G+ A KL +E+ ++ + D +Y LLD L D+
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 116/290 (40%), Gaps = 32/290 (11%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T+ ++ +E D ++ +M+ YN++I F + +L A+ +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTYINHV-- 233
M + C P I ++NIL + + NT +
Sbjct: 394 MISK---GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 234 --YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+E + LF++MV+ + PDI S ++ G + + AL IF ++ L
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
Y +IHG+C + +A +L + KG +++YN ++S L + + +M
Sbjct: 511 -YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
E+ D +TY ++ A A +L++E+++ + K++
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ F ++ KL A +F+ M + R RP I SY IL G+ +
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRR---VRPDIVSYKILLDGLCDNGE--------L 489
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +F ++ +E DI +I G ++ V+DA +F + + L ++ +Y+
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL-DARAYNI 548
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC + A L +M +G P +YN L+ A + + + + EM
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Query: 356 RPVDFITYRTVLD 368
P D T + V++
Sbjct: 609 FPADVSTVKMVIN 621
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 14/265 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + L + E ++ ++M+A + YN+II+ K S +V
Sbjct: 216 TYNTIIDCLFKDRQVNEALNIFSEMIA-KGISPNVSTYNSIIHGLC---KFSEWKHVATL 271
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + + P++ + L A G T + V M+ G+EPD+ +
Sbjct: 272 MNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDV--------VDVMIQRGVEPDVVTYT 323
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+++ G+ L + +++A ++F M V PN SY LI+G C R A L +EM +
Sbjct: 324 ALMDGHCLRSEMDEADKVFDTM-VRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQ 382
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+ VP+ +YN+L+ L G + + + EM+ + D +TYR +LD +C+ +
Sbjct: 383 RELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQ 442
Query: 379 AMKLLKELQNKNLI-DGYTYTKLLD 402
AM +LK ++ NL D +Y ++D
Sbjct: 443 AMAMLKAIEGSNLAPDIQSYNIVID 467
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+ STY+ + L ++ + ++N+M+ + ++ T++ + ++ A V
Sbjct: 248 NVSTYNSIIHGLCKFSEWKHVATLMNEMVDS-KIMPNVVIFTTLVDALCKEGMVTIAHDV 306
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M R +E P + +Y L R + M+ +F MV G P++
Sbjct: 307 VDVMIQ-RGVE--PDVVTYTALMDGHCLRSE--------MDEADKVFDTMVRKGCAPNVI 355
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S +++I GY ++ A+ +F +M +PN +Y+ LIHGLC GR ++A L E
Sbjct: 356 SYSTLINGYCKIQRIDKAMYLFEEM-CQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G +P +Y L+ L +++ + L + D +Y V+D +CR G
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGE 474
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
A L L +K L D +TYT +++ L
Sbjct: 475 LEAAGDLFSSLSSKGLHPDVWTYTIMINGL 504
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I + + +++ +A+Y+F+ M E P+I +YN L G+ +
Sbjct: 357 YSTLINGYCKIQRIDKAMYLFEEMCQR---ELVPNIVTYNTLIHGLCHVGR--------L 405
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +MV G PD+ + ++ + H++ A+ + + N P+ SY+
Sbjct: 406 RDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEG-SNLAPDIQSYNI 464
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C G + A +L + KG P +Y +++ L L G + E K EM
Sbjct: 465 VIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDG 524
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
D TY + R A++LL+E+ + D T T ++++L DD
Sbjct: 525 CSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDD 577
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G +PD + ++I+G + + +AL +F +M V + PN +Y LIHGLC G ++
Sbjct: 139 GHQPDTATFTTLIRGLCVEGKIGEALHLFDKM-VGEGFQPNGVTYGTLIHGLCKVGNSRA 197
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L M +K P+ +YN+++ L + +V E + EMI K + TY +++
Sbjct: 198 AIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIH 257
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGYT-YTKLLDVLEDDFGNSIRH 414
+C+ L+ E+ + ++ +T L+D L + +I H
Sbjct: 258 GLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAH 304
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
N + T+ L KQM + GI D+++L +I + N V+ + ++ + P++
Sbjct: 86 NMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKI-FKLGHQPDT 144
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
++ LI GLC +G+ A L D+M +GF P+ +Y +L+ L G ++ L
Sbjct: 145 ATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRS 204
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
M++K + ITY T++D + + + EA+ + E+ K +
Sbjct: 205 MVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGI 245
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 10/215 (4%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L+R + F + L +P ++ L GK H LF +MV +
Sbjct: 122 LNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALH--------LFDKMVGE 173
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G +P+ + ++I G + A+R+ M V N PN +Y+ +I L +
Sbjct: 174 GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSM-VQKNCEPNVITYNTIIDCLFKDRQVNE 232
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A + EM KG P+ +YNS++ L E + + EM++ + + + + T++D
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+C+ G A ++ + + + D TYT L+D
Sbjct: 293 ALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMD 327
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I+ +L A+ +F M S + P + +Y IL +L + + ++
Sbjct: 392 YNTLIHGLCHVGRLRDAIALFHEMVASGQI---PDLVTYRILLD-YLCKTR-------HL 440
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + K + + PDI S N +I G + A +F + P+ ++Y
Sbjct: 441 DQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSS-KGLHPDVWTYTI 499
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+GLC QG A +L EM G P +YN + N E ++ L EM+ +
Sbjct: 500 MINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRG 559
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
D T +++ + G ++L E
Sbjct: 560 FSADASTITLIVEMLSDDGLDQSVKQILHE 589
>gi|255586858|ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525946|gb|EEF28343.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 113/240 (47%), Gaps = 20/240 (8%)
Query: 151 KMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
K+ +EM++ F T+ N+I + + +S A+ + K M R C P
Sbjct: 287 KLLKEMEE--------SGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKM---RLYGCEPW 335
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
++ Y +L GK MV +G P+I + ++++ G I V
Sbjct: 336 VKHYTLLVRKLCKHGKAA--------EASIFLTDMVQEGFPPNIIAYSALLGGLIEVQEV 387
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ AL++F + P+ +Y+ L+ GL RT+ AR L +EM KG +PS +YN
Sbjct: 388 DQALKLFKDISA-RGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVVTYNL 446
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ NG +++ + L M K+R + TY T++D +C+ GR +A+ L E++ +
Sbjct: 447 LIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEMRRRG 506
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 130 QPRFRHDASTYHIMTRKL----GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
+P +H Y ++ RKL AA+ + D+V + P+ AL +I E
Sbjct: 333 EPWVKH----YTLLVRKLCKHGKAAEASIFLTDMVQEGFP-PNIIAYSALLGGLI----E 383
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
+++ +A+ +FK + S C P + +YNIL K Y H E R LF +M
Sbjct: 384 VQEVDQALKLFKDI--SARGRC-PDVIAYNILM-------KGLYEAH-RTEEARNLFNEM 432
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
V G+ P + + N +I G+ + ++DA+ M PN F+Y LI GLC GR
Sbjct: 433 VMKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKERE-PNVFTYTTLIDGLCKAGR 491
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+A L +EM+R+G P+ ++ + L
Sbjct: 492 PDDAVMLWNEMRRRGCRPNRVAFMGFIHGL 521
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 106/247 (42%), Gaps = 13/247 (5%)
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
DDV ++ A ++ +I +A KL AV +F+ M + C + YN
Sbjct: 215 DDVQYKLFRDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAE---IGCNRDLLLYNN 271
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
L N N +E L K+M G +P F+LNS+ V+ AL +
Sbjct: 272 LI--------NGLCNSDRLEESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDL 323
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
+M + Y P Y L+ LC G+ A +M ++GF P+ +Y++L+ L
Sbjct: 324 VKKMRL-YGCEPWVKHYTLLVRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSALLGGLI 382
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-Y 395
EV++ +K ++ + R D I Y ++ + R EA L E+ K LI
Sbjct: 383 EVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVV 442
Query: 396 TYTKLLD 402
TY L+D
Sbjct: 443 TYNLLID 449
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 113/256 (44%), Gaps = 51/256 (19%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------- 226
+LY+ +I F +KL +A+ ++ MK L+ +P I + L ++F GK
Sbjct: 115 SLYDVLIGGFCSNKKLDKALSLYAEMK---MLKIQPDIGVVSKLISSFPEEGKLIDILEE 171
Query: 227 ------------------NTYINHVYMETIRCLFKQMVNDG--------------IEPDI 254
++ +N ++ CL + M+ +G I P+
Sbjct: 172 TLEDMNIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDDDVQYKLFRDEKIRPNT 231
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
S + +I G + + ++ A+ +F M + + Y+ LI+GLC R + + +L
Sbjct: 232 ASFSIVINGLMQACKLDLAVCLFQDMAEI-GCNRDLLLYNNLINGLCNSDRLEESYKLLK 290
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD---FITYRTVL-DEI 370
EM+ GF P+ + NS+ L +V + ++++K R ++ + T+L ++
Sbjct: 291 EMEESGFKPTQFTLNSIFGCLCKRQDVSGAL----DLVKKMRLYGCEPWVKHYTLLVRKL 346
Query: 371 CRRGRAGEAMKLLKEL 386
C+ G+A EA L ++
Sbjct: 347 CKHGKAAEASIFLTDM 362
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I G++ + V+ +++F++M Y P+ YD LI G C+ + A L EMK
Sbjct: 84 NLIHGFVKQSRVDKGVQLFYKMQK-YGLSPDISLYDVLIGGFCSNKKLDKALSLYAEMKM 142
Query: 319 KGFVPSSKSYNSLVSALALNGE----VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
P + L+S+ G+ +EET++++ IE Q + +VL + G
Sbjct: 143 LKIQPDIGVVSKLISSFPEEGKLIDILEETLEDM--NIETQT----LLCNSVLSSLVNSG 196
Query: 375 RAGEAMKLLKELQNKNLIDGYTYTKLLD 402
+A LL+ + D Y D
Sbjct: 197 LIDKACCLLRNMMGNGDDDDVQYKLFRD 224
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I F + + S A + + M + P + +YN L AF+ GK +
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGK-------FF 342
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+ +M+ GI P+ + +SMI G+ N ++ A +F+ M PN +++
Sbjct: 343 EAEE-LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT-KGCSPNLITFNT 400
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C R + EL EM G V + +YN+L+ L G++ + L EMI
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
D +T T+LD +C G+ +A+++ K +Q
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 18/260 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +TY+ + D++ +M+++ C +T++ + KL A+ +
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEM 487
Query: 196 FKYMKNSR-NLEC-------RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
FK M+ S+ +L+ P +++YNIL + ++ GK ++E L+++M +
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK-------FLEAEE-LYEEMPH 539
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI PD + +SMI G + +++A ++F MG ++ PN ++ LI+G C GR
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVD 598
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+ EL EM R+G V ++ +Y +L+ G + + EMI D IT R +L
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Query: 368 DEICRRGRAGEAMKLLKELQ 387
+ + A+ +L++LQ
Sbjct: 659 TGLWSKEELKRAVAMLEKLQ 678
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 12/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+++ ++S A+ F M + CRP++ ++ L G+ +
Sbjct: 152 FTTLLHGLCVEDRVSEALDFFHQMFETT---CRPNVVTFTTLMNGLCREGR-------IV 201
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +M+ DG++P + +++ G AL + +M V + +PN Y
Sbjct: 202 EAV-ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC GR +A+ L EM+ KG P +YNS++ +G + + L EM+E++
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +TY +++ + G+ EA +L E+ + +I + TY+ ++D
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T+ Y TI+ + A+ + + M+ ++ P++ Y+ + + G+++
Sbjct: 218 TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI--IPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ LF +M GI PD+F+ NSMI G+ S +DA ++ +M + P+
Sbjct: 276 N--------LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM-LERKISPDVV 326
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LI+ +G+ A EL DEM +G +P++ +Y+S++ ++ + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
K + IT+ T++D C R + M+LL E+ L+ D TY L+
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 134/308 (43%), Gaps = 42/308 (13%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
+ D TY+ + + E +++ ++ML T Y+++I F + +L
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT-ITYSSMIDGFCKQNRLDA 378
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NT 228
A ++F M C P++ ++N L + + NT
Sbjct: 379 AEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 229 YINHVYM----ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
I+ Y+ L ++M++ G+ PDI + ++++ G + + DAL +F M
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 285 NYL----------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
L P+ +Y+ LI GL +G+ A EL +EM +G VP + +Y+S++
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-D 393
L ++E + M K + +T+ T+++ C+ GR + ++L E+ + ++ +
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615
Query: 394 GYTYTKLL 401
TY L+
Sbjct: 616 AITYITLI 623
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 14/227 (6%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
F E + L A+ +F M SR L PS+ + L + + + +Y
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLMGVVVRMERPDLVISLY-------- 102
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
++M I DI+S N +IK + + + AL F ++ P+ ++ L+HGLC
Sbjct: 103 QKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKI-TKLGLHPDVVTFTTLLHGLCV 161
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ R A + +M P+ ++ +L++ L G + E V L M+E IT
Sbjct: 162 EDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVLEDD 407
Y T++D +C++G A+ LL++++ + I + Y+ ++D L D
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T++ + AK + +++++M T T YNT+I+ F L+ A+ + +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT-YNTLIHGFYLVGDLNAALDLLQE 455
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGK---NTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M +S P I + + L GK + V ++ + L +G+EPD+
Sbjct: 456 MISSGLC---PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ N +I G I +A ++ +M G+V P++ +Y +I GLC Q R A ++
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRGIV----PDTITYSSMIDGLCKQSRLDEATQM 568
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M K F P+ ++ +L++ G V++ ++ EM + + ITY T++ +
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 373 RGRAGEAMKLLKEL 386
G A+ + +E+
Sbjct: 629 VGNINGALDIFQEM 642
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I F + + S A + + M + P + +YN L AF+ GK +
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGK-------FF 342
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+ +M+ GI P+ + +SMI G+ N ++ A +F+ M PN +++
Sbjct: 343 EAEE-LYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT-KGCSPNLITFNT 400
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C R + EL EM G V + +YN+L+ L G++ + L EMI
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
D +T T+LD +C G+ +A+++ K +Q
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 112/228 (49%), Gaps = 12/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+++ ++S A+ +F M + CRP++ ++ L G+ +
Sbjct: 152 FNTLLHGLCVEDRVSEALNLFHQMFETT---CRPNVVTFTTLMNGLCREGR-------IV 201
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +M+ DG++P + +++ G AL + +M + + +PN Y
Sbjct: 202 EAV-ALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSA 260
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC GR +A+ L EM+ KG P +YNS++ +G + + L EM+E++
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +TY +++ + G+ EA +L E+ + +I + TY+ ++D
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 18/260 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +TY+ + D++ +M+++ C +T++ + KL A+ +
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEM 487
Query: 196 FKYMKNSR-NLEC-------RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
FK M+ S+ +L+ P +++YNIL + ++ GK ++E L+++M +
Sbjct: 488 FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK-------FLEAEE-LYEEMPH 539
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI PD + +SMI G + +++A ++F MG ++ PN ++ LI+G C GR
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVD 598
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+ EL EM R+G V ++ +Y +L+ G + + EMI D IT R +L
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Query: 368 DEICRRGRAGEAMKLLKELQ 387
+ + A+ +L++LQ
Sbjct: 659 TGLWSKEELKRAVAMLEKLQ 678
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T+ Y TI+ + A+ + + M+ ++ P++ Y+ + + G+++
Sbjct: 218 TQITYGTIVDGMCKIGDTVSALDLLRKMEEISHI--IPNVVIYSAIIDSLCKDGRHSDAQ 275
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ LF +M GI PD+F+ NSMI G+ S +DA ++ +M + P+
Sbjct: 276 N--------LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM-LERKISPDVV 326
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LI+ +G+ A EL DEM +G +P++ +Y+S++ ++ + M
Sbjct: 327 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLM 386
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
K + IT+ T++D C R + M+LL E+ L+ D TY L+
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 134/308 (43%), Gaps = 42/308 (13%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
+ D TY+ + + E +++ ++ML T Y+++I F + +L
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT-ITYSSMIDGFCKQNRLDA 378
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NT 228
A ++F M C P++ ++N L + + NT
Sbjct: 379 AEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 229 YINHVYM----ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
I+ Y+ L ++M++ G+ PDI + ++++ G + + DAL +F M
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495
Query: 285 NYL----------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
L P+ +Y+ LI GL +G+ A EL +EM +G VP + +Y+S++
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-D 393
L ++E + M K + +T+ T+++ C+ GR + ++L E+ + ++ +
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615
Query: 394 GYTYTKLL 401
TY L+
Sbjct: 616 AITYITLI 623
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T++ + AK + +++++M T T YNT+I+ F L+ A+ + +
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT-YNTLIHGFYLVGDLNAALDLLQE 455
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGK---NTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M +S P I + + L GK + V ++ + L +G+EPD+
Sbjct: 456 MISSGLC---PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ N +I G I +A ++ +M G+V P++ +Y +I GLC Q R A ++
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRGIV----PDTITYSSMIDGLCKQSRLDEATQM 568
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M K F P+ ++ +L++ G V++ ++ EM + + ITY T++ +
Sbjct: 569 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRK 628
Query: 373 RGRAGEAMKLLKEL 386
G A+ + +E+
Sbjct: 629 VGNINGALDIFQEM 642
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 14/227 (6%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
F E + L A+ +F M SR L PS+ + L + + + +Y
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPL---PSVVDFCKLMGVVVRMERPDLVISLY-------- 102
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
++M I DI+S +IK + + + AL F ++ P+ +++ L+HGLC
Sbjct: 103 QKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKI-TKLGLHPDVVTFNTLLHGLCV 161
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ R A L +M P+ ++ +L++ L G + E V L M+E IT
Sbjct: 162 EDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQIT 221
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVLEDD 407
Y T++D +C+ G A+ LL++++ + I + Y+ ++D L D
Sbjct: 222 YGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKD 268
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 50/284 (17%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC--RPSIR 212
E +++ ++A + Y +I F KL A Y F M +EC ++
Sbjct: 382 EEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM-----IECGISATVY 436
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
SYN + GK M+ LFK+MV+ G++P + + S+I GY V
Sbjct: 437 SYNSMINCQCKFGK--------MKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPK 488
Query: 273 ALRIFHQM---GVVYN-------------------------------YLPNSFSYDYLIH 298
A +++H+M G+ N LPN +Y+ LI
Sbjct: 489 AFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIE 548
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G C +G T A EL DEM +KG P + +Y L++ L G V E + + ++ K + +
Sbjct: 549 GHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRL 608
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D + Y +L C+ GR EA+ +E+ + L +D +Y L+
Sbjct: 609 DELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLI 652
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 126/286 (44%), Gaps = 23/286 (8%)
Query: 121 LELFNW---ASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-Y 176
LELF+ A +P D Y ++ + L K + + +++NQ A + C + Y
Sbjct: 210 LELFDTLVNAGVKP----DCYIYTVVVKCLCELKDFNKAKEIINQ--AEGNGCSLSIVTY 263
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N I +++++ AV V + + + + +Y L L R + + M+
Sbjct: 264 NVFINGLCKSKRVWEAVEVKRSLGEK---GLKADLVTYCTLVLG-LCRIQEFEVGMEMMD 319
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+M+ G P +++ +I+G I + A + +++G + +PN F Y+ +
Sbjct: 320 -------EMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKL-GVVPNLFVYNSM 371
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I+ LC G+ + A L M +G P+ +Y L+ +++ +MIE
Sbjct: 372 INSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGI 431
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLL 401
+Y ++++ C+ G+ A L KE+ +K L TYT L+
Sbjct: 432 SATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLI 477
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNH--VNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
++MV G++ D+ S +I G + N + + LR H G+ P++ Y LI G
Sbjct: 634 QEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQ----PDNVIYTILIDGF 689
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
G K A E M +G+VP+S +Y +LV+ L G V E M+ + +
Sbjct: 690 IKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNH 749
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
ITY LD + + G A++L + + + TY L+
Sbjct: 750 ITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILI 790
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 104/262 (39%), Gaps = 46/262 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
++ +I + + +++ V V M R+ P +R+ + L A L+R +
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLM---RDYGLLPEVRTLSALLNA-LARIRK-------F 206
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL 287
+ LF +VN G++PD + ++K N A I +Q V YN
Sbjct: 207 RQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVF 266
Query: 288 PNSF--------------------------SYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
N +Y L+ GLC + E+ DEM G+
Sbjct: 267 INGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGY 326
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
VPS + + L+ L G +E + L ++ + + Y ++++ +C+ G+ EA
Sbjct: 327 VPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAEL 386
Query: 382 LLKELQNKNL-IDGYTYTKLLD 402
L + + L + TYT L+D
Sbjct: 387 LFSVMAERGLNPNDVTYTILID 408
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 94/219 (42%), Gaps = 15/219 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+Y +I F ++ L +A + M + P+ +Y L G
Sbjct: 680 VIYTILIDGFIKSGNLKKAFEFWYIMIGEGYV---PNSVTYTALVNGLFKAG-------- 728
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
Y+ + LFK+M+ P+ + + ++ +AL++ + M + N+ +Y
Sbjct: 729 YVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM--LQGSFANTVTY 786
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE-MI 352
+ LI G C G+ + A +L D M G VP +Y++ + G V+ + ++WE M+
Sbjct: 787 NILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAM-DMWECML 845
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
++ D + + ++ C G A++L ++ + L
Sbjct: 846 QRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGL 884
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N +I+GY +A ++ M + +P+ +Y I+ C +G A ++ + M
Sbjct: 787 NILIRGYCQIGKFQEAAKLLDVM-IGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECML 845
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
++G P +N L+ A LNGE++ ++ +M+ + TY +++ ++ +R R
Sbjct: 846 QRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRAR 903
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 25/248 (10%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 107 FDTCRKVLEHLMKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGD--------I 158
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI---FHQMGVVYNYLPNSFS 292
+ +F + G+ P + S N+++ GYI +++ ++ H GV P+ ++
Sbjct: 159 RVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVX----PDVYT 214
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+GLC + + A EL DEM KG VP+ ++ +L+ NG V+ ++ +M+
Sbjct: 215 YSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFG 409
+ D ITY T++ +C++G +A L+ E+ K L D TYT L+D E D
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLD 334
Query: 410 NSIRHHLR 417
+ H R
Sbjct: 335 TAFEHRKR 342
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L FK
Sbjct: 154 KEGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEG---FKLKSAMHAS 206
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 207 GVXPDVYTYSVLINGLCKESK--------MDXANELFDEMLVKGLVPNGVTFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G A +L DEM KG P
Sbjct: 259 KNGRVDLAMEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+++E
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLKPDTGTYTMIIN 395
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY ++ L +++ ++ML + T+I + ++ A+ +
Sbjct: 211 DVYTYSVLINGLCKESKMDXANELFDEMLV-KGLVPNGVTFTTLIDGHCKNGRVDLAMEI 269
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+K M + L P + +YN L +G + L +M G++PD
Sbjct: 270 YKQMLSQSLL---PDLITYNTLIYGLCKKGD--------LNQAHDLIDEMSMKGLKPDKI 318
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ ++I G ++ A +M + N + +Y LI GLC +GR+ +A ++ E
Sbjct: 319 TYTTLIDGCCKEGDLDTAFEHRKRM-IQENIRLDDVAYTALISGLCQEGRSVDAEKMMRE 377
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
M G P + +Y +++ + G+V + K L EM +TY +++
Sbjct: 378 MLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMN 430
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 104/196 (53%), Gaps = 10/196 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+ S
Sbjct: 192 QPDVYTYSVLINGLCKESK--------MDDANELFDEMLDKGLVPNGVTFTTLIDGHCKS 243
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A +L DEM KG P +
Sbjct: 244 GRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 302
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L+ G++E ++ MI++ +D + Y ++ +C+ GR +A K+L+E+
Sbjct: 303 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREML 362
Query: 388 NKNL-IDGYTYTKLLD 402
+ L D TYT +++
Sbjct: 363 SAGLKPDTGTYTMIIN 378
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 58/230 (25%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 90 FDTCRKVLEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGD--------I 141
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI---FHQMGVVYNYLPNSFS 292
+ +F + G+ P + S N+++ GYI +++ R+ H GV P+ ++
Sbjct: 142 RVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQ----PDVYT 197
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+GLC + + +A EL DEM KG VP NG
Sbjct: 198 YSVLINGLCKESKMDDANELFDEMLDKGLVP--------------NG------------- 230
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+T+ T++D C+ GR AM++ K++ +++L D TY L+
Sbjct: 231 --------VTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLI 272
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 131/309 (42%), Gaps = 31/309 (10%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
F WA + P F H +YHI+ LG ++ + + D + +M + F + + +
Sbjct: 98 FFLWAKRIPGFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRS 157
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF------------TAFLSRGKNTYI 230
++ A S A+ F M RPS+ + L F R K+ +
Sbjct: 158 YSRANLPSDAIRAFDRMAE---FGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFE 214
Query: 231 NHVYMETI--------------RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
+I R +F +M G D+ + NS+++ +V++A ++
Sbjct: 215 AKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKM 274
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F ++G + P++ SY I C + + D MKR VP+ +YN ++ L
Sbjct: 275 FREIGS-HGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLC 333
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGY 395
NG+VE+ + L EM+E+ D +Y T+L C A KL+ + N L D +
Sbjct: 334 KNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRH 393
Query: 396 TYTKLLDVL 404
+Y LL +L
Sbjct: 394 SYNMLLKLL 402
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 9/203 (4%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ AV K R C + +YN L A L +G N ++ Y +F+++ +
Sbjct: 230 IGEAVEARKVFDEMRGRGCALDVLAYNSLLEA-LCKGGN--VDEAYK-----MFREIGSH 281
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+EPD S I+ Y +N+++ + +M Y+ +PN F+Y+ +I LC G+ ++
Sbjct: 282 GVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKR-YDLVPNVFTYNCIIKKLCKNGKVED 340
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L EM +G P + SYN++++ + EV K + M++ D +Y +L
Sbjct: 341 AYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLK 400
Query: 369 EICRRGRAGEAMKLLKELQNKNL 391
+ R GR A ++ + + +
Sbjct: 401 LLVRVGRFDRATEIWESMGERGF 423
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 21/210 (10%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A KM++E + P C Y I + EA + VF + + +
Sbjct: 271 AYKMFRE----IGSHGVEPDACS----YAIFIRAYCEANNIHS---VFSVLDRMKRYDLV 319
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +YN + GK +E L +M+ G+ PD +S N+++ + +
Sbjct: 320 PNVFTYNCIIKKLCKNGK--------VEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHS 371
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
VN A ++ M V N LP+ SY+ L+ L GR A E+ + M +GF PS +Y
Sbjct: 372 EVNRATKLISIM-VKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTY 430
Query: 329 NSLVSALA-LNGEVEETVKNLWEMIEKQRP 357
+ ++ L G++EE + MI++ P
Sbjct: 431 SVMIHGLCKKKGKLEEACRYFETMIDEGIP 460
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 134/268 (50%), Gaps = 27/268 (10%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A ++++EMDD P + +I F ++ A+ ++K M R+ +
Sbjct: 184 AWEVFKEMDD----FGVAPDV----RSFTILIGGFCRVGEIEEALKIYKEM---RHRGIK 232
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + S++ L F RGK + Y+ +RC G+ PD +I G+ +
Sbjct: 233 PDLVSFSCLIGLFARRGKMDHA-MAYLREMRCF-------GLVPDGVIYTMVIGGFCRAG 284
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++DALR+ +M V LP+ +Y+ L++GLC + R +A L +EM+ +G P ++
Sbjct: 285 LMSDALRVRDEM-VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTF 343
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ + G++++ ++ M+ ++ D +TY T++D +CR+G +A L ++ +
Sbjct: 344 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 403
Query: 389 KNLIDGY-TYTKLLDV------LEDDFG 409
+ + + TY+ L+D +ED FG
Sbjct: 404 REIFPNHVTYSILIDSHCEKGQVEDAFG 431
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 127/285 (44%), Gaps = 38/285 (13%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY+ + L + + + ++N+M P C + T+I+ + KL +A
Sbjct: 304 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLC----TFTTLIHGYCIEGKLDKA 359
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG--------------KNTYINHV----- 233
+ +F M N R RP I +YN L +G + + NHV
Sbjct: 360 LQLFDTMLNQR---LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 416
Query: 234 --------YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+E +M+N GI P+I + NS+IKGY S +V+ + +M +V
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM-MVNK 475
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+ +Y+ LIHG + + +A +L + M+++ P +YN L++ +++G V+E
Sbjct: 476 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 535
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+M K D TY ++++ G + EA +L E+ +
Sbjct: 536 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + R+L A + M R P + ++ L + GK +
Sbjct: 308 YNTLLNGLCKERRLLDAEGLLNEM---RERGVPPDLCTFTTLIHGYCIEGK--------L 356
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF M+N + PDI + N++I G ++ A ++ M PN +Y
Sbjct: 357 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS-REIFPNHVTYSI 415
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI C +G+ ++A DEM KG +P+ +YNS++ +G V + K L +M+ +
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY T++ + + +A KLL ++ + + D TY L++
Sbjct: 476 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLIN 523
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
Y + + + + +M + PD+ + N M+ + A+ + M V P
Sbjct: 105 YCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM-VSKGLKP 163
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+Y+ ++ GLC G A E+ EM G P +S+ L+ GE+EE +K
Sbjct: 164 GIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIY 223
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
EM + D +++ ++ RRG+ AM L+E++ L+ DG YT ++
Sbjct: 224 KEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVI 277
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 48/100 (48%)
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
N+++ + ++H C + EM+++ P ++N +V A G+ E + +
Sbjct: 94 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
M+ K +TY +VL +CR G +A ++ KE+ +
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD 193
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 115/233 (49%), Gaps = 13/233 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y TII+ EA ++ + +FK M+ +C P++R+Y ++ A +N
Sbjct: 284 EVSYTTIIHGLCEAGRIDEGISLFKKMRED---DCYPTVRTYTVIIHALFGNDRN----- 335
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+E + LF +M EP++ + M+ ++++ RI ++M + +P+ +
Sbjct: 336 --LEGMD-LFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEM-MEKGLVPSVVT 391
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI G C +GR + A E+ M+ P+ ++YN L+ + V + + L +M+
Sbjct: 392 YNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKML 451
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
E + +TY +++ C+ G A KLL L+ L+ D +TY+ +D L
Sbjct: 452 ESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTL 504
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 33/237 (13%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK----NTYIN 231
YN ++ A + V+ M N + P+I + N + A+ G N Y++
Sbjct: 182 YNELLMMLARFLMIDEMKRVYTEMLNDMIV---PNIYTLNTMVNAYSKMGNIVEANLYVS 238
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN-- 289
++ G+ PD F+ S+I GY +N VN A ++F N +PN
Sbjct: 239 KIFQA------------GLSPDSFTYTSLILGYCRNNDVNSAYKVF-------NMMPNKG 279
Query: 290 ----SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
SY +IHGLC GR L +M+ P+ ++Y ++ AL N E +
Sbjct: 280 CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM 339
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
EM E+ + TY ++D +C+ + E+ ++L E+ K L+ TY L+
Sbjct: 340 DLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALI 396
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 112/261 (42%), Gaps = 32/261 (12%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG------- 225
E YN +I F++ + + +A+ + M S+ PS+ +YN L G
Sbjct: 424 ERTYNELICGFSKRKHVHKAMTLLSKMLESK---LTPSLVTYNSLIHVQCKAGHFDSAYK 480
Query: 226 -----------KNTYINHVYMETI--------RC-LFKQMVNDGIEPDIFSLNSMIKGYI 265
+ + V+++T+ C LF + GI+ + ++I G+
Sbjct: 481 LLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHC 540
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ +++A+ + +M + LPNS +Y+ LI+G+C +G+ + + + M + G P+
Sbjct: 541 KAGKIDEAISLLERMHS-EDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTV 599
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y L+ + G+ + + +M+ D TY + C G EA ++
Sbjct: 600 ATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMAR 659
Query: 386 LQNKNLI-DGYTYTKLLDVLE 405
+ ++ D TYT L+ E
Sbjct: 660 MIEAGVMPDSLTYTLLISAYE 680
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 13/199 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + L +K +E D+ N L E +Y +I +A K+ A+ +
Sbjct: 493 DQWTYSVFIDTLCKSKRMEEACDLFNS-LKEKGIKANEVMYTALIDGHCKAGKIDEAISL 551
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M + +C P+ +YN L GK ++ + + M G++P +
Sbjct: 552 LERMHSE---DCLPNSSTYNSLIYGVCKEGK--------VQEGLSMVENMSKMGVKPTVA 600
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +I+ + + A R+F+QM V + + P+ ++Y IH C G K A +
Sbjct: 601 TYTILIEEMLREGDFDHANRVFNQM-VSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMAR 659
Query: 316 MKRKGFVPSSKSYNSLVSA 334
M G +P S +Y L+SA
Sbjct: 660 MIEAGVMPDSLTYTLLISA 678
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVS----FNTLMNGYIKLGDLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYXQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + G PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G+++E + M D TY +++ +C+ + +A +L E+ + L+ +G
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 12/149 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+IY + L +A + M + + L +P +Y L G +
Sbjct: 279 YNTLIYGLCKKGDLKQAQDLXDEM-SMKGL--KPDKITYTTLIDGSCKEGD--------L 327
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
ET K+M+ + I D + ++I G DA ++ +M V P +Y
Sbjct: 328 ETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSV-GLKPEIGTYTM 386
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+I+ C +G +L EM+R G+VPS
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYN 177
LE+F + ++ R DA TY+ + L + + + ++ M+ P+ AL +
Sbjct: 204 LEVF-YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T F + L A ++K M + P++ +YN L F G +
Sbjct: 263 T----FVKEGNLLEARNLYKEMIRRSVV---PNVFTYNSLINGFCIHG--------CLGD 307
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ +F MV+ G PD+ + N++I G+ S V D +++F +M + ++F+Y+ LI
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-TYQGLVGDAFTYNTLI 366
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
HG C G+ A+++ + M G P +YN L+ L NG++E+ + + ++ + +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
VD ITY ++ +CR + EA L + L K + D Y ++ L
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 130/300 (43%), Gaps = 33/300 (11%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FR T + +QE +V+ M F +YNT+I + R L+ A
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF-GFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------------------------- 226
+ VF M+ R +YN L + + G+
Sbjct: 204 LEVFYCMEKK---GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260
Query: 227 -NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+T++ + R L+K+M+ + P++F+ NS+I G+ + + DA +F M V
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM-VSKG 319
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+ +Y+ LI G C R ++ +L EM +G V + +YN+L+ G++
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
K M++ D +TY +LD +C G+ +A+ ++++LQ + +D TY ++ L
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
+M+ G P I +L S++ G+ N +A+ + M + ++PN Y+ +I+GLC
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG-FGFVPNVVIYNTVINGLCKN 197
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
NA E+ M++KG + +YN+L+S L+ +G + + L +M++++ + I +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
++D + G EA L KE+ ++++ + +TY L++
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 23/199 (11%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + +K ++ + +M G YNT+I+ + +A KL+ A V
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEM-TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 196 FKYMKNSRNLEC--RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
F +R ++C P I +YNIL + GK +E + + + ++ D
Sbjct: 382 F-----NRMVDCGVSPDIVTYNILLDCLCNNGK--------IEKALVMVEDLQKSEMDVD 428
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
I + N +I+G ++ + +A +F + GV P++ +Y +I GLC +G + A
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK----PDAIAYITMISGLCRKGLQREAD 484
Query: 311 ELCDEMKRKGFVPSSKSYN 329
+LC MK GF+PS + Y+
Sbjct: 485 KLCRRMKEDGFMPSERIYD 503
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN I EA +L AV + M+ P + +YN L + H
Sbjct: 227 YNIWIRGLCEAGRLPEAVRLVDGMRAY----AVPDVVTYNTLIRGLCKKSMPQEAMH--- 279
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++M+N G PD F+ N++I GY + V +A + V ++P+ +Y
Sbjct: 280 -----YLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD-AVFKGFVPDQVTYCS 333
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLCA+G + A EL +E + KG P YNSLV L L G + ++ + EM E+
Sbjct: 334 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 393
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLD 402
D TY V++ +C+ G +A ++ + K L D +T+ L+D
Sbjct: 394 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLID 441
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 13/256 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + M QE +++ + F + Y ++I + RA+ +
Sbjct: 292 DDFTYNTIIDGYCKISMVQEATELLKDAVFK-GFVPDQVTYCSLINGLCAEGDVERALEL 350
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F ++ +P I YN L +G I H + +M +G PDI
Sbjct: 351 FN---EAQAKGIKPDIVVYNSLVKGLCLQG---LILHALQ-----VMNEMAEEGCHPDIQ 399
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N +I G +++DA + + ++ YLP+ F+++ LI G C + + +A +L +
Sbjct: 400 TYNIVINGLCKMGNISDATVVMND-AIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVER 458
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G P + +YNS+++ L G+V E + EMI K + ITY +++ CR +
Sbjct: 459 MWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK 518
Query: 376 AGEAMKLLKELQNKNL 391
EA K++ ++ + L
Sbjct: 519 MEEASKVIVKMSQEGL 534
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
++ + M C P I++YNI+ G + + + G P
Sbjct: 380 LHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGN--------ISDATVVMNDAIMKGYLP 431
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+F+ N++I GY ++ AL++ +M Y P++ +Y+ +++GLC G+ E
Sbjct: 432 DVFTFNTLIDGYCKRLKLDSALQLVERMWE-YGIAPDTITYNSVLNGLCKAGKVNEVNET 490
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM KG P+ +YN L+ + ++EE K + +M ++ D +++ T++ CR
Sbjct: 491 FQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCR 550
Query: 373 RGRAGEAMKLLKELQNKNLIDGYTYT 398
G A L ++L+ K GY+ T
Sbjct: 551 NGDLEGAYLLFQKLEEK----GYSAT 572
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 21/246 (8%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LY I +A A +L AV F+ M C P+ +YN + A + + + VY
Sbjct: 55 LYVASIRAYARAGRLRDAVDAFERMDL---FACPPAAPAYNAIMDALVDAAYHDQAHKVY 111
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN--SFS 292
+ +M+ G+ PD+ + ++ + L+ + ALR+ LP+ + +
Sbjct: 112 V--------RMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRA-------LPHRGAVA 156
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y ++ GL A G T +AR+L D+M P+ ++N ++ AL G+V E L ++I
Sbjct: 157 YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVI 216
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL-EDDFGNS 411
++ ++ TY + +C GR EA++L+ ++ + D TY L+ L +
Sbjct: 217 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQE 276
Query: 412 IRHHLR 417
H+LR
Sbjct: 277 AMHYLR 282
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 134/341 (39%), Gaps = 50/341 (14%)
Query: 86 LDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTR 145
L D F+ V P + L N + + D LELFN A + + D Y+ + +
Sbjct: 316 LKDAVFKGFV---PDQVTYCSLINGLCAEGDVERALELFNEAQAK-GIKPDIVVYNSLVK 371
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
L + V+N+M + YN +I + +S A V M ++
Sbjct: 372 GLCLQGLILHALQVMNEMAEEGCHPDIQT-YNIVINGLCKMGNISDATVV---MNDAIMK 427
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P + ++N L + R K +++ L ++M GI PD + NS++ G
Sbjct: 428 GYLPDVFTFNTLIDGYCKRLK--------LDSALQLVERMWEYGIAPDTITYNSVLNGLC 479
Query: 266 LSNHVNDALRIFHQM--------GVVYNYL--------------------------PNSF 291
+ VN+ F +M + YN L P++
Sbjct: 480 KAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAV 539
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
S++ LI+G C G + A L +++ KG+ ++ ++N+L+ A + + K EM
Sbjct: 540 SFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEM 599
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ K D TYR ++D C+ A L E+ K I
Sbjct: 600 LSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFI 640
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 12/208 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ +A K++ F+ M C P+ +YNIL F K M
Sbjct: 471 YNSVLNGLCKAGKVNEVNETFQEMILK---GCHPNPITYNILIENFCRSNK--------M 519
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +M +G+ PD S N++I G+ + + A +F ++ Y + +++
Sbjct: 520 EEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE-KGYSATADTFNT 578
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI + A ++ DEM KG S +Y L+ V+ +L EMI+K
Sbjct: 579 LIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG 638
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL 383
T+ V++ + R +A+ ++
Sbjct: 639 FIPSMSTFGRVINSLTVNHRVFQAVGII 666
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 15/219 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D TY+ + L A E+++ +M+ C + YN +I F + K+ A
Sbjct: 467 DTITYNSVLNGLCKAGKVNEVNETFQEMILKG--CHPNPITYNILIENFCRSNKMEEASK 524
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
V M P S+N L F G +E LF+++ G
Sbjct: 525 VIVKMSQE---GLHPDAVSFNTLIYGFCRNGD--------LEGAYLLFQKLEEKGYSATA 573
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N++I + +++ A +IF +M + + +S++Y LI G C A
Sbjct: 574 DTFNTLIGAFSGKLNMHMAEKIFDEM-LSKGHRADSYTYRVLIDGSCKTANVDRAYMHLV 632
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
EM +KGF+PS ++ ++++L +N V + V + M++
Sbjct: 633 EMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK 671
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 205 LECR--PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
LEC S+ +NIL F G + + +F + G+ P + S N+++
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGD--------IRLAQSVFDAITKWGLRPSVVSYNTLMN 185
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
GYI +++ R+ M + P+ ++Y LI+GLC + + +A EL DEM KG V
Sbjct: 186 GYIRLGDLDEGFRLKSAM-LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 244
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P+ ++ +L+ NG V+ ++ +M+ + D ITY T++ +C++G +A L
Sbjct: 245 PNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHL 304
Query: 383 LKELQNKNL-IDGYTYTKLLD--VLEDDFGNSIRHHLR 417
+ E+ K L D TYT L+D E D ++ H R
Sbjct: 305 IDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKR 342
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 154 KDGDIRLAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLAS--- 206
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 207 GVQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLVPNGVTFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A L DEM KG P
Sbjct: 259 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 318 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLKPDARTYTMIIN 395
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 13/252 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D T +I+ L K + +V+ ++ Y ++I + +A ++ A V
Sbjct: 116 DTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSV 175
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M S RP+ +YN+L N Y + ME+ ++ Q++ PD+
Sbjct: 176 YNDMLQSGT---RPNTVTYNVLI--------NGYGKALDMESAVRMYWQLILHSCPPDVV 224
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NS+I GY ++DA+RI+ +MG ++ PN +++ +IH LC Q R+ A L E
Sbjct: 225 TFNSLIDGYCRCGQLDDAMRIWMEMGQ-HHIQPNVYTFSIIIHSLCTQNRSAEALSLLRE 283
Query: 316 MK-RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+ R VP + YN ++ L G+V+E + +M EK D TY ++ C +G
Sbjct: 284 LNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKG 343
Query: 375 RAGEAMKLLKEL 386
R EA+ L ++
Sbjct: 344 RIPEAVTLFHKM 355
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + S+N++ G ++ L ++M G PD + N ++ G
Sbjct: 80 PDVWSFNVVIKGVCRVGN--------LQKALELVERMTEFGCSPDTITQNILVDGLCRVK 131
Query: 269 HVN---DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
VN + LR + GV +PN +Y +I G C GR K+A + ++M + G P++
Sbjct: 132 QVNKGHEVLRRLQRDGVC---MPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNT 188
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+YN L++ ++E V+ W++I P D +T+ +++D CR G+ +AM++ E
Sbjct: 189 VTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWME 248
Query: 386 LQNKNL-IDGYTYTKLLDVL 404
+ ++ + YT++ ++ L
Sbjct: 249 MGQHHIQPNVYTFSIIIHSL 268
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G + ++ N+++ I DA+ +F Y P+ +S++ +I G+C G +
Sbjct: 41 GCRIEWYAYNNLLNTLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQK 100
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP----VDFITYR 364
A EL + M G P + + N LV L V++ K + QR + +TY
Sbjct: 101 ALELVERMTEFGCSPDTITQNILVDGLC---RVKQVNKGHEVLRRLQRDGVCMPNVVTYT 157
Query: 365 TVLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLD 402
+V+ C+ GR +A + + LQ+ + TY L++
Sbjct: 158 SVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLIN 196
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 17/228 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K +LEC S+ +NIL +F+ G+ +
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE--------I 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + + P + S N+++ GYI +++ R+ + M P+ ++Y
Sbjct: 153 RLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS-GVQPDVYTYSV 211
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM G VP+ ++ +L+ NG V+ ++ +M+ +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY T++ +C++G +A L+ E+ K L D TYT L+D
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 123/246 (50%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWSLRPSVVS----FNTLMNGYIKLGDLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + +MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGNCKEGD--------LETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G++PS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 134/274 (48%), Gaps = 22/274 (8%)
Query: 134 RHDASTYH---IMTR--KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
R+ AS Y +M R K G ++ Q + D + + PS +NT++ + +
Sbjct: 131 RYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVS----FNTLMNGYIKLGD 186
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L + M S +P + +Y++L K M+ LF +M++
Sbjct: 187 LDEGFRLKSAMHASG---VQPDVYTYSVLINGLCKESK--------MDEAHKLFDEMLDR 235
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+ P+ + ++I G+ + ++ A+ I+ QM + + P+ +Y+ LI+GLC +G
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQM-LSQGFSPDXITYNTLIYGLCKKGDLXQ 294
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A++L DEM KG P +Y +L+ G++E + MI++ +D ++Y ++
Sbjct: 295 AKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALIS 354
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+C+ GR+ +A K+L+E+ + L D TYT ++
Sbjct: 355 GLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVM 388
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 17/228 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K +LEC S+ +NIL +F+ G+ +
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE--------I 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + + P + S N+++ GYI +++ R+ + M P+ ++Y
Sbjct: 153 RLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS-GVQPDVYTYSV 211
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM G VP+ ++ +L+ NG V+ ++ +M+ +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY T++ +C++G +A L+ E+ K L D TYT L+D
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWSLRPSVVS----FNTLMNGYIKLGDLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGNCKEGD--------LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G++PS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 17/228 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K +LEC S+ +NIL +F+ G+ +
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGE--------I 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + + P + S N+++ GYI +++ R+ + M P+ ++Y
Sbjct: 153 RLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS-GVQPDVYTYSV 211
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM G VP+ ++ +L+ NG V+ ++ +M+ +
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY T++ +C++G +A L+ E+ K L D TYT L+D
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLID 319
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWSLRPSVVS----FNTLMNGYIKLGDLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGNCKEGD--------LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G +PS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPS 415
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 131/272 (48%), Gaps = 16/272 (5%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA K+ F HD +TY + R L ++ EM ++ +M+ +P+ A +
Sbjct: 77 VKIQFFKWAGKRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSE 136
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
++ +A+ +++A+ VF +K+ + C+P+ +YN + + G + I+ +Y E
Sbjct: 137 VVKILGKAKMVNKALSVFYQIKSRK---CKPTASTYNSMILMLMQEGHHEKIHELYHE-- 191
Query: 239 RCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYL 296
M N+G PD + + ++ ++ + A+R+F +M N L P + Y L
Sbjct: 192 ------MCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKA--NGLHPTAKIYTTL 243
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ G K A L EMK KG P+ +Y L+ L +G VE+ M++
Sbjct: 244 LAIYFKSGDEK-ALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGC 302
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
D + +++ + GR +A+KL ++++
Sbjct: 303 KPDVVLINNLINIFGKAGRLEDALKLFDQMRS 334
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 127/303 (41%), Gaps = 50/303 (16%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVYVFK 197
TY + + LG + ++ V ML C + L N +I F +A +L A+ +F
Sbjct: 273 TYTELIKGLGKSGRVEDAYSVFLNMLK--DGCKPDVVLINNLINIFGKAGRLEDALKLFD 330
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
M R+L+C P++ +YN + A + F++M +G+ P F+
Sbjct: 331 QM---RSLKCAPNVVTYNTVIKALFE-------SKAPASEAASWFEKMKANGVTPSSFTY 380
Query: 258 NSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS----------------- 292
+ +I G+ +N V AL + +M Y L N+
Sbjct: 381 SILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKE 440
Query: 293 ---------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
Y +I L GR A +L +EMK+ G P +YN+L+S L G +EE
Sbjct: 441 NCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEE 500
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLL 401
L M E D ++ +L+ + R GR +A ++ ++++ +LI D +Y +L
Sbjct: 501 AFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKD-SLIKPDAVSYNTIL 559
Query: 402 DVL 404
L
Sbjct: 560 GSL 562
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 6/156 (3%)
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
MIK ++A+ +F++M + P+ ++Y+ L+ GL G + A M+
Sbjct: 453 MIKNLGKCGRPSEAVDLFNEMKKI-GCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEEN 511
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G P S+N +++ LA G E+ + +M + D ++Y T+L + R G EA
Sbjct: 512 GCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEA 571
Query: 380 MKLLKELQNKNL-IDGYTYTKLLDVL----EDDFGN 410
KL++E+ ++ D TY+ +L+ + EDD N
Sbjct: 572 AKLMREMGSRGFEYDHITYSSILEAVGKVDEDDEPN 607
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 20/166 (12%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRA 192
R A Y +M + LG E D+ N+M C + YN ++ A + A
Sbjct: 444 RSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIG--CNPDVYAYNALMSGLVRAGMIEEA 501
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ M+ + C P + S+NI+ G+ ++M +M + I+P
Sbjct: 502 FSALRTMEENG---CTPDLNSHNIILNGLARTGRPEQATEMFM--------KMKDSLIKP 550
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
D S N+++ S +A ++ +MG F YD++ +
Sbjct: 551 DAVSYNTILGSLSRSGMFEEAAKLMREMG------SRGFEYDHITY 590
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 150/339 (44%), Gaps = 60/339 (17%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDAS--TYHIMTR-KLGAAKMYQEMDDVVNQMLATPSFC 170
Q D + L+ +WA Q F HI+TR KL + VVN + T
Sbjct: 58 QFDSSLVLKFLDWARSQQFFSFQCKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDL 117
Query: 171 ------------GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
+ A+++ ++ A +++A+ + K+ + P + SYN +
Sbjct: 118 FQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFM---PGVLSYNAIL 174
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
A + ++ I +FK+MV G+ P++++ N +I+G+ + ++ L F
Sbjct: 175 DAVIRTKQSVKI-------AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFG 227
Query: 279 QMG--------VVYNYL--------------------------PNSFSYDYLIHGLCAQG 304
+M V YN + PN SY+ +I+GLC +G
Sbjct: 228 EMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREG 287
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ K E+ +EM ++ +VP ++N+L++ G + + EM++ + +TY
Sbjct: 288 QMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYT 347
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
T+++ +C+ G AM+ L +++++ L +G TYT L+D
Sbjct: 348 TLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID 386
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 134/281 (47%), Gaps = 18/281 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
+Y+++ L +E +++ +M + + +NT+I + +A+ +
Sbjct: 275 SYNVVINGLCREGQMKETSEILEEM-SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333
Query: 199 M-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
M KN + P++ +Y L + G +N ME QM + G+ P+ +
Sbjct: 334 MVKNGLS----PNVVTYTTLINSMCKAGN---LNRA-ME----FLDQMRDRGLHPNGRTY 381
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
++I G+ + A +I +M V + P +Y+ LI+G C GR ++A L EM
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEM-VENGFTPTIITYNALINGHCILGRMEDASGLLQEMI 440
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
+GF+P SY++++S N E+E+ + EM+ K D TY +++ +C++ R G
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500
Query: 378 EAMKLLKELQNKNL-IDGYTYTKLLDV--LEDDFGNSIRHH 415
E L +E+ + L D TYT L++ +E D ++R H
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I F++ L +A + K M + P+I +YN L G+ M
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEMVENG---FTPTIITYNALINGHCILGR--------M 429
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L ++M+ G PD+ S +++I G+ + + A ++ +M V P+ +Y
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEM-VAKGISPDVATYSS 488
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC Q R +L EM G P +Y SL++A + G++++ ++ EMI+K
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMK-LLKELQNKNLIDGYTYTKLLD 402
D +TY +++ ++ R EA + LLK L +++ + TY L+D
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A Y+++I + R+L +F+ M +L P +Y L A+ G
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEM---LSLGLPPDEVTYTSLINAYCIEGD------- 533
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
++ L +M+ G PDI + N +I G+ + +A R+ ++ + +PN +Y
Sbjct: 534 -LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL-LYEESVPNEITY 591
Query: 294 DYLI---------------HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
+ LI G C +G A + + M +KG+ + + YN ++ +
Sbjct: 592 NTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKV 651
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
G +E+ EM+ +T + + G+ E +LL
Sbjct: 652 GNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 109/264 (41%), Gaps = 12/264 (4%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +TY + + L + E+ D+ +ML+ E Y ++I + L +A+ +
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSL-GLPPDEVTYTSLINAYCIEGDLDKALRL 540
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAF-----LSRGKNTYINHVYMETI--RCLFKQMVND 248
M P I +YN+L F K + +Y E++ + ++++
Sbjct: 541 HDEMIQKG---FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDN 597
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
+ S +++KG+ + +N+A R+ M + Y N Y+ +IHG G +
Sbjct: 598 CNNLEFKSALALMKGFCMKGLMNEADRVLESM-LQKGYKLNEEVYNVIIHGHSKVGNIEK 656
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L EM GF P S + +L +L G+ E + L ++ R + + ++
Sbjct: 657 AYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIG 716
Query: 369 EICRRGRAGEAMKLLKELQNKNLI 392
+ G +LK++ L+
Sbjct: 717 INSKEGNMDAVFNVLKDMALSGLL 740
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 117/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F E ++L +A+ + M+ S C S+ ++ IL AF GK M
Sbjct: 180 YNTVIRGFCEGKELEKALQLANEMQGSG---CSWSLVTWGILIDAFCKAGK--------M 228
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L K+M + G+E D+ S+I+G+ ++ +F ++ + P + +Y+
Sbjct: 229 DEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEV-LERGDSPCAITYNT 287
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C GR K A E+ + M +G P+ +Y L+ L G+ +E ++ L M++K
Sbjct: 288 LIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKD 347
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +TY +++++C+ +A+++++ ++ + D TY LL L
Sbjct: 348 EEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGL 397
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 17/276 (6%)
Query: 112 TLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG 171
+L D L +EL K+ R R D TY+ + L A E ++ ML S+
Sbjct: 366 SLVADALEIVELM----KKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 172 TEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
+ + +N +I+ + +L +A+ ++ + I + NIL + L G +
Sbjct: 422 PDVISFNALIHGLCKGNRLHQALDIYDLLVEKLG---AGDIVTTNILLNSTLKSGD---V 475
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
N ME L+KQ+ N I P+ + +MI G+ + +N A + +M + P+
Sbjct: 476 NKA-ME----LWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKM-RLSELPPSV 529
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
F Y+ L+ LC +G A L +EM+R P S+N ++ G+++ L
Sbjct: 530 FDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVG 589
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
M D TY +++ + G EA+ ++
Sbjct: 590 MSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 48/264 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN II + ++ A+ + + MK R RP +YN L ++G +
Sbjct: 355 YNIIINKLCKDSLVADALEIVELMKKRRT---RPDNITYNSLLGGLCAKGD--------L 403
Query: 236 ETIRCLFKQMVNDG--IEPDIFSLNSMIKGYILSNHVNDALRIF----HQMG----VVYN 285
+ L M+ D +PD+ S N++I G N ++ AL I+ ++G V N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTN 463
Query: 286 YL--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
L PNS +Y +I G C G A+ L +M+
Sbjct: 464 ILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLS 523
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
PS YN L+S+L G +++ + EM D I++ ++D + G A
Sbjct: 524 ELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSA 583
Query: 380 MKLLKELQNKNLI-DGYTYTKLLD 402
LL + + L D +TY+KL++
Sbjct: 584 ESLLVGMSHAGLSPDLFTYSKLIN 607
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L AV VF+ +S S N++ T SR NH E +++M+
Sbjct: 53 QLKNAVSVFQQAVDSGG---SLSFAGNNLMATLVRSR------NH---EVAFSFYRKMLE 100
Query: 248 DGIEPDIFSLNSMIKGYIL---SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
+ SL+ +++ ++ + + L + + G +N ++Y+ L+ GLC
Sbjct: 101 TDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNV----YNYNILLKGLCRNL 156
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
A L EM++ +P SYN+++ E+E+ ++ EM +T+
Sbjct: 157 EFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWG 216
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++D C+ G+ EAM LLKE+++K L D YT L+
Sbjct: 217 ILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLI 254
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 29/283 (10%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ---------EMDDVVNQM-----LATPS 168
L + K R Y ++ KLGA + + DV M ++
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK 489
Query: 169 FCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
Y T+I F + L+ A + M+ S E PS+ YN L ++ +G
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLS---ELPPSVFDYNCLLSSLCKKGT-- 544
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL- 287
++ LF++M D PD+ S N MI G + + + A + +G+ + L
Sbjct: 545 ------LDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLL--VGMSHAGLS 596
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+ F+Y LI+ G A D+M GF P + +S++ GE ++ +
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEF 656
Query: 348 LWEMIEKQRPVDFITYRTVLDEIC-RRGRAGEAMKLLKELQNK 389
+ ++++K +D TV+D +C G A +LL+ +K
Sbjct: 657 VKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVADDK 699
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 14/173 (8%)
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSL-------------NSMIKGYILSNHVNDA 273
+T+IN V + + F QM G + +L N ++KG + A
Sbjct: 102 DTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKA 161
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
+ + +M + +P+ SY+ +I G C + A +L +EM+ G S ++ L+
Sbjct: 162 VSLLREM-RQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILID 220
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
A G+++E + L EM K D I Y +++ C G L E+
Sbjct: 221 AFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEV 273
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 133/268 (49%), Gaps = 27/268 (10%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A ++++EMDD + +I F ++ A+ ++K M R+ +
Sbjct: 245 AWEVFKEMDDF--------GVAPDVRSFTILIGGFCRVGEIEEALKIYKEM---RHRGIK 293
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + S++ L F RGK + Y+ +RC G+ PD +I G+ +
Sbjct: 294 PDLVSFSCLIGLFARRGKMDHA-MAYLREMRCF-------GLVPDGVIYTMVIGGFCRAG 345
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++DALR+ +M V LP+ +Y+ L++GLC + R +A L +EM+ +G P ++
Sbjct: 346 LMSDALRVRDEM-VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTF 404
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ + G++++ ++ M+ ++ D +TY T++D +CR+G +A L ++ +
Sbjct: 405 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 464
Query: 389 KNLIDGY-TYTKLLDV------LEDDFG 409
+ + + TY+ L+D +ED FG
Sbjct: 465 REIFPNHVTYSILIDSHCEKGQVEDAFG 492
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY+ + L + + + ++N+M P C + T+I+ + KL +A
Sbjct: 365 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLC----TFTTLIHGYCIEGKLDKA 420
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG--------------KNTYINHV----- 233
+ +F M N R RP I +YN L +G + + NHV
Sbjct: 421 LQLFDTMLNQR---LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 477
Query: 234 --------YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+E +M+N GI P+I + NS+IKGY S +V+ + +M +V
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM-MVNK 536
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+ +Y+ LIHG + + +A +L + M+++ P +YN L++ +++G V+E
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 596
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+M K D TY ++++ G + EA +L E+ +
Sbjct: 597 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGF 642
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + R+L A + M R P + ++ L + GK +
Sbjct: 369 YNTLLNGLCKERRLLDAEGLLNEM---RERGVPPDLCTFTTLIHGYCIEGK--------L 417
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF M+N + PDI + N++I G ++ A ++ M PN +Y
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS-REIFPNHVTYSI 476
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI C +G+ ++A DEM KG +P+ +YNS++ +G V + K L +M+ +
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY T++ + + +A KLL ++ + + D TY L++
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLIN 584
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
Y + + + + +M + PD+ + N M+ + A+ + M V P
Sbjct: 166 YCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM-VSKGLKP 224
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+Y+ ++ GLC G A E+ EM G P +S+ L+ GE+EE +K
Sbjct: 225 GIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIY 284
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
EM + D +++ ++ RRG+ AM L+E++ L+ DG YT ++
Sbjct: 285 KEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVI 338
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 48/100 (48%)
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
N+++ + ++H C + EM+++ P ++N +V A G+ E + +
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
M+ K +TY +VL +CR G +A ++ KE+ +
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD 254
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 144/315 (45%), Gaps = 36/315 (11%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA+++ + HD STY + R L + Y EM ++ +M+ P T +
Sbjct: 101 VKMQFFRWAARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSD 160
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
II A+ +S+AV +F +K + C+P+ +YN + + G+ ++ +Y E
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKARK---CQPTAHAYNSMIIMLMHEGEYEKVHELYNEMS 217
Query: 239 ---RC-------------------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+C L +M ++G++P ++ ++V
Sbjct: 218 NEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNV 277
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ AL +F +M Y P+ F+Y LI GL GR A EM+R+G P + N+
Sbjct: 278 HGALGLFEEMRHQYCR-PDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNN 336
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPV-DFITYRTVLDEICR-RGRAGEAMKLLKELQN 388
+++ L G +++ +K L+E +E R + +TY T++ + + R E + ++
Sbjct: 337 MINFLGKAGRLDDAIK-LFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKG 395
Query: 389 KNLIDG-YTYTKLLD 402
+ +TY+ L+D
Sbjct: 396 SGISPSPFTYSILID 410
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 117/292 (40%), Gaps = 55/292 (18%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+++EM+ + PS YNTII E++ SR + + + +
Sbjct: 350 AIKLFEEME----TLRCIPSV----VTYNTIIKALFESK--SRVSEISSWFERMKGSGIS 399
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMI------K 262
PS +Y+IL F + E L ++M G P + S+I K
Sbjct: 400 PSPFTYSILIDGFCKTNRT--------EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 451
Query: 263 GYILSNHV-----------------------------NDALRIFHQMGVVYNYLPNSFSY 293
Y L+N + +DA+ +F +M + PN ++Y
Sbjct: 452 RYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRL-GCTPNVYAY 510
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L+ GL G A M+ G +P SYN +++ALA G + + L M +
Sbjct: 511 NALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQ 570
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D ++Y TVL + G EA KL+KE+ D TY+ +L+ +
Sbjct: 571 SAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAI 622
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 121/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVS----FNTLMNGYIKLGDLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K ME LF++M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MEDANELFEEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVXLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + G PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G+++E + M D TY +++ +C+ + +A +L +E+ + L+ +G
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGSCKEGD--------LETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G+VPS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ + + Y I+ EM D++N M+ ++N I +A+ + A
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN-GLSPDHHIFNIIFTAYAKKAMIDEA 397
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+++F MK P + +Y L A G+ ++ ++ F QM+N+G+ P
Sbjct: 398 MHIFNKMKQQ---GLSPDVVNYGALIDALCKLGR---VDDAVLK-----FNQMMNEGVAP 446
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+IF NS++ G + A + +M + P+ ++ ++ LC +G+ A+ L
Sbjct: 447 NIFVFNSLVYGLCTVDKWEKAKEFYFEM-LNQGIRPDVVFFNTILCNLCTKGQVMKAQRL 505
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M+R G P SY +L+ L G ++E K+L M+ D TY T+L CR
Sbjct: 506 IDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565
Query: 373 RGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
GR +A + +E+ + G TY+ +L
Sbjct: 566 AGRIDDAYGVFREMLRNGITPGVVTYSTIL 595
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 126/286 (44%), Gaps = 34/286 (11%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEAL--YNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
A ++ + MD +V +M P T + YNT++ F ++ A+ + M +S+
Sbjct: 142 AKRLCEAMDILVKRM---PELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRS 198
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETI---------------------------R 239
C P++ SY I+ F + G+ ++++E +
Sbjct: 199 CPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAE 258
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+F+QM++ G++PD + N +I GY+ + +R+ +M + P+ ++Y L++
Sbjct: 259 GVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA-HGLKPDCYTYGSLLNY 317
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC GR + AR L D M RKG P+ Y L+ A G + E L M+E D
Sbjct: 318 LCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPD 377
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ + ++ EAM + +++ + L D Y L+D L
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDAL 423
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N ++ +A++L A+ + +K L C P + SYN L F + + E
Sbjct: 133 NQLLKGLCDAKRLCEAMDIL--VKRMPELGCTPDVVSYNTLLKGFCNEKRAE-------E 183
Query: 237 TIRCLFKQMVNDG--IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+ L + G P++ S +I G+ V+ A +F +M + PN +Y
Sbjct: 184 ALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEM-MDRGIQPNVVTYT 242
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I GLC A + +M KG P + +YN L+ G+ +E V+ L EM
Sbjct: 243 TVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAH 302
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVL 404
D TY ++L+ +C GR EA L + K LI GY L +
Sbjct: 303 GLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEM 362
Query: 405 ED------DFGNSIRHHL 416
D + G S HH+
Sbjct: 363 HDLLNLMVENGLSPDHHI 380
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 12/217 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
++N+++Y K +A + M N RP + +N + ++G+
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQ---GIRPDVVFFNTILCNLCTKGQ-------V 499
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
M+ R L M G P + S ++I G+ L +++A + M V P+ ++Y+
Sbjct: 500 MKAQR-LIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSV-GLKPDEWTYN 557
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+HG C GR +A + EM R G P +Y++++ L E + MI
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ + Y +L+ + + EA KL + L +K+
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDF 654
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 13/225 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+NTI+ ++ +A + M+ + RP + SY L G+
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMER---VGTRPGVISYTTLIGGHCLVGRID----- 535
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
E + L M++ G++PD ++ N+++ GY + ++DA +F +M + P +Y
Sbjct: 536 --EAAKSL-DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREM-LRNGITPGVVTY 591
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
++HGL R A+EL M G + YN +++ L+ N V+E K +
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
K ++ T+ ++ + + GR +AM L + + L+ D +TY
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTY 696
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
V +F M ++ P +Y+IL F G+ +E F ++ G
Sbjct: 75 VVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGR--------LEHGFATFGLILKSGWR 126
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+ +N ++KG + + +A+ I + P+ SY+ L+ G C + R + A E
Sbjct: 127 VNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALE 186
Query: 312 LCDEM---KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
L M + + P+ SY +++ G+V++ EM+++ + +TY TV+D
Sbjct: 187 LLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+C+ A + +++ +K + D TY L+
Sbjct: 247 GLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLI 280
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 93/222 (41%), Gaps = 13/222 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D TY+ + A + V +ML G Y+TI++ R+ S A
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV-VTYSTILHGLFTTRRFSEA 607
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
++ M S + +I YNI+ KN ++ + LF+ + + +
Sbjct: 608 KELYLNMITSGK---QWNIWIYNIILNGL---SKNNCVDEAFK-----LFQSLCSKDFQL 656
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+I + N MI S DA+ +F + Y +P+ F+Y + L +G + +L
Sbjct: 657 EITTFNIMIGALFKSGRNEDAMHLFATISS-YGLVPDVFTYCLIAENLIEEGYLEEFDDL 715
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
M++ G P+S+ N+LV L G++ L ++ EK
Sbjct: 716 FSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEK 757
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 145/331 (43%), Gaps = 55/331 (16%)
Query: 113 LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV--VNQMLATPSFC 170
++E P + F W+ KQ ++ H+ Y + L AK ++D + V+ + F
Sbjct: 110 IREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAK---DVDRIRFVSSEIKKFEFP 166
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
T + N +I F + + ++V++ MK + P++ +YN L N +
Sbjct: 167 MTVSAANALIKSFGKLGMVEELLWVWRKMKENG---IEPTLYTYNFLM--------NGLV 215
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GV 282
+ +++++ +F+ M + I+PDI + N+MIKGY + A+ M +
Sbjct: 216 SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKI 275
Query: 283 VYNYL----------------------------PNSFSYDYLIHGLCAQGRTKNARELCD 314
Y + P++FS +I GLC +G+ + +
Sbjct: 276 TYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL--VIGGLCKEGKLNEGYTVFE 333
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M RKG P+ Y L+ A +G VE+ ++ L MI++ D +TY V++ +C+ G
Sbjct: 334 NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNG 393
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
R EA+ + L I+ Y+ L+D L
Sbjct: 394 RVEEALDYFHTCRFDGLAINSMFYSSLIDGL 424
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 15/272 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
R + D TY+ M + A Q+ + + M T + Y T+I
Sbjct: 234 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM-ETRGHEADKITYMTMIQACYADSDFGS 292
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
V +++ M + + ++ P +++++ GK +N Y +F+ M+ G +
Sbjct: 293 CVALYQEM-DEKGIQVPP--HAFSLVIGGLCKEGK---LNEGYT-----VFENMIRKGSK 341
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++ +I GY S V DA+R+ H+M + + P+ +Y +++GLC GR + A +
Sbjct: 342 PNVAIYTVLIDGYAKSGSVEDAIRLLHRM-IDEGFKPDVVTYSVVVNGLCKNGRVEEALD 400
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ G +S Y+SL+ L G V+E + EM EK D Y ++D
Sbjct: 401 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 460
Query: 372 RRGRAGEAMKLLKELQNKNLIDG--YTYTKLL 401
+ + EA+ L K ++ + D YTYT LL
Sbjct: 461 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 492
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 58/278 (20%)
Query: 152 MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
+YQEMD+ + + P ++ +I + KL+ VF+ M + +P++
Sbjct: 296 LYQEMDE---KGIQVPPHA-----FSLVIGGLCKEGKLNEGYTVFENMIRKGS---KPNV 344
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
Y +L + G + IR L +M+++G +PD+ + + ++ G + V
Sbjct: 345 AIYTVLIDGYAKSGS-------VEDAIR-LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 396
Query: 272 DALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+AL FH ++ L NS Y LI GL GR A L +EM KG S YN+
Sbjct: 397 EALDYFHT--CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 454
Query: 331 LVSALALNGEVEETVK-----------------------------------NLWEM-IEK 354
L+ A + +V+E + LW+M I+K
Sbjct: 455 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 514
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+R + +C G+ A K+L EL +I
Sbjct: 515 GITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 552
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF++M G D + N++I + V++A+ +F +M ++Y L+ G+
Sbjct: 436 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGM 495
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ R + A +L D M KG P++ + +L + L L+G+V K L E+ +D
Sbjct: 496 FKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD- 554
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+++ +C+ GR EA KL + + + G T +++ L
Sbjct: 555 AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINAL 599
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG---TEALYNTIIYFFAEARKL 189
F+ D TY ++ L +E D + T F G Y+++I +A ++
Sbjct: 375 FKPDVVTYSVVVNGLCKNGRVEEALDYFH----TCRFDGLAINSMFYSSLIDGLGKAGRV 430
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND- 248
A +F+ M C YN L AF H ++ LFK+M +
Sbjct: 431 DEAERLFEEMSEKG---CTRDSYCYNALIDAF--------TKHRKVDEAIALFKRMEEEE 479
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G + +++ ++ G + +AL+++ M + P + + L GLC G+
Sbjct: 480 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMM-IDKGITPTAACFRALSTGLCLSGKVAR 538
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A ++ DE+ G + + + +++ L G ++E K + E+ R V +++
Sbjct: 539 ACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 597
Query: 369 EICRRGRAGEAMKLL 383
+ + G+A AMKL+
Sbjct: 598 ALRKVGKADLAMKLM 612
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 145/331 (43%), Gaps = 55/331 (16%)
Query: 113 LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV--VNQMLATPSFC 170
++E P + F W+ KQ ++ H+ Y + L AK ++D + V+ + F
Sbjct: 128 IREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAK---DVDRIRFVSSEIKKFEFP 184
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
T + N +I F + + ++V++ MK + P++ +YN L N +
Sbjct: 185 MTVSAANALIKSFGKLGMVEELLWVWRKMKEN---GIEPTLYTYNFLM--------NGLV 233
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GV 282
+ +++++ +F+ M + I+PDI + N+MIKGY + A+ M +
Sbjct: 234 SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKI 293
Query: 283 VYNYL----------------------------PNSFSYDYLIHGLCAQGRTKNARELCD 314
Y + P++FS +I GLC +G+ + +
Sbjct: 294 TYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL--VIGGLCKEGKLNEGYTVFE 351
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M RKG P+ Y L+ A +G VE+ ++ L MI++ D +TY V++ +C+ G
Sbjct: 352 NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNG 411
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
R EA+ + L I+ Y+ L+D L
Sbjct: 412 RVEEALDYFHTCRFDGLAINSMFYSSLIDGL 442
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 15/272 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
R + D TY+ M + A Q+ + + M T + Y T+I
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM-ETRGHEADKITYMTMIQACYADSDFGS 310
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
V +++ M + + ++ P +++++ GK +N Y +F+ M+ G +
Sbjct: 311 CVALYQEM-DEKGIQVPP--HAFSLVIGGLCKEGK---LNEGYT-----VFENMIRKGSK 359
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++ +I GY S V DA+R+ H+M + + P+ +Y +++GLC GR + A +
Sbjct: 360 PNVAIYTVLIDGYAKSGSVEDAIRLLHRM-IDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ G +S Y+SL+ L G V+E + EM EK D Y ++D
Sbjct: 419 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 372 RRGRAGEAMKLLKELQNKNLIDG--YTYTKLL 401
+ + EA+ L K ++ + D YTYT LL
Sbjct: 479 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 510
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 58/278 (20%)
Query: 152 MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
+YQEMD+ + + P ++ +I + KL+ VF+ M + +P++
Sbjct: 314 LYQEMDE---KGIQVPPHA-----FSLVIGGLCKEGKLNEGYTVFENMIRKGS---KPNV 362
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
Y +L + G + IR L +M+++G +PD+ + + ++ G + V
Sbjct: 363 AIYTVLIDGYAKSGS-------VEDAIR-LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 272 DALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+AL FH ++ L NS Y LI GL GR A L +EM KG S YN+
Sbjct: 415 EALDYFHT--CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 331 LVSALALNGEVEETVK-----------------------------------NLWEM-IEK 354
L+ A + +V+E + LW+M I+K
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 532
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+R + +C G+ A K+L EL +I
Sbjct: 533 GITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF++M G D + N++I + V++A+ +F +M ++Y L+ G+
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGM 513
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ R + A +L D M KG P++ + +L + L L+G+V K L E+ +D
Sbjct: 514 FKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD- 572
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+++ +C+ GR EA KL + + + G T +++ L
Sbjct: 573 AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINAL 617
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG---TEALYNTIIYFFAEARKL 189
F+ D TY ++ L +E D + T F G Y+++I +A ++
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFH----TCRFDGLAINSMFYSSLIDGLGKAGRV 448
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND- 248
A +F+ M C YN L AF H ++ LFK+M +
Sbjct: 449 DEAERLFEEMSEK---GCTRDSYCYNALIDAF--------TKHRKVDEAIALFKRMEEEE 497
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G + +++ ++ G + +AL+++ M + P + + L GLC G+
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMM-IDKGITPTAACFRALSTGLCLSGKVAR 556
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A ++ DE+ G + + + +++ L G ++E K + E+ R V +++
Sbjct: 557 ACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 615
Query: 369 EICRRGRAGEAMKLL 383
+ + G+A AMKL+
Sbjct: 616 ALRKVGKADLAMKLM 630
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 91/168 (54%), Gaps = 1/168 (0%)
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+R F + + G PD F+ N ++ + + + +A+ + +MG PN+FSY+ +I
Sbjct: 148 VRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVI 207
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
G+ GR +A E+ DEM + +P+ +YN+++ G++E + +M+
Sbjct: 208 AGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLK 267
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ ITY +L +CR GR GE LL E+ ++ ++ DG+TY+ L D L
Sbjct: 268 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 315
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 130/276 (47%), Gaps = 22/276 (7%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ +A TY+++ L A E ++++M + + +I++ S+A
Sbjct: 266 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV--PDGFTYSILFDGLSRNGDSKA 323
Query: 193 VYVF--KYMKNSRNLECRPSIRSY--NILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ KY+KN +I Y +IL GK + V + +VN
Sbjct: 324 MLSLFGKYLKNGV------TIGDYTCSILLNGLCKDGKVSIAEEV--------LQSLVNA 369
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+ P N++I GY + + A F QM + P+ +Y+ LI+GLC R N
Sbjct: 370 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH-IKPDHITYNALINGLCKAERITN 428
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A++L EM+ G P+ +++N+L+ A G++E+ L EM E + ++Y ++++
Sbjct: 429 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 488
Query: 369 EICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
C+ G+ EA+ +L ++ +K+++ + Y ++D
Sbjct: 489 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDA 524
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 21/252 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N + A L AV + + M R+ P+ SYN++ G+ V
Sbjct: 167 WNKAVQACVAAGDLGEAVGMLRRM--GRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV-- 222
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F +M + P+ + N+MI G+I + R+ QM V + PN+ +Y+
Sbjct: 223 ------FDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM-VCHGLKPNAITYNV 275
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC GR L DEM + VP +Y+ L L+ NG+ + + + ++
Sbjct: 276 LLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG 335
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVLE 405
+ T +L+ +C+ G+ A ++L+ L N LI+GY T L+
Sbjct: 336 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAF 395
Query: 406 DDFGNSIRHHLR 417
FG H++
Sbjct: 396 STFGQMKSRHIK 407
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 15/244 (6%)
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
V Q L T +YNT+I + + +L A F MK SR++ +P +YN L
Sbjct: 362 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK-SRHI--KPDHITYNALIN 418
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
+ T + ME M ++G+ P + + N++I Y + + + +
Sbjct: 419 GLCKAERITNAQDLLME--------MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 470
Query: 280 MGVVYNYL-PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
M N L PN SY +++ C G+ A + D+M K +P+++ YN+++ A +
Sbjct: 471 M--QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEH 528
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G ++ + +M +TY ++ +C + + EA +++ L N LI D +Y
Sbjct: 529 GPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 588
Query: 398 TKLL 401
L+
Sbjct: 589 NTLI 592
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I +A +++ A + M+++ P++ ++N L A+ G+ +
Sbjct: 413 YNALINGLCKAERITNAQDLLMEMQDN---GVNPTVETFNTLIDAYGRTGQ--------L 461
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +M +G++P++ S S++ + + + +A+ I M + LPN+ Y+
Sbjct: 462 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM-FHKDVLPNAQVYNA 520
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G A L ++MK G PS +YN L+ L ++ E + + + +
Sbjct: 521 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 580
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
D ++Y T++ C RG +A+ L + +
Sbjct: 581 LIPDAVSYNTLISACCYRGNIDKALDLQQRMH 612
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I+ F + K+ AV + M + L P+ + YN + A++ G N
Sbjct: 483 YGSIVNAFCKNGKIPEAVAILDDMFHKDVL---PNAQVYNAIIDAYVEHGPN-------- 531
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L ++M ++GI P I + N +IKG + +++A I + + + +P++ SY+
Sbjct: 532 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN-HRLIPDAVSYNT 590
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI C +G A +L M + G + ++Y+ L+S L G + E +M++
Sbjct: 591 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNN 650
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKN 390
+ +++ + G +A L KE LQ +N
Sbjct: 651 VVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRN 686
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYN 177
LE+F + ++ R DA TY+ + L + + + ++ M+ P+ AL +
Sbjct: 729 LEVF-YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 787
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T F + L A ++K M + P++ +YN L F G +
Sbjct: 788 T----FVKEGNLLEARNLYKEMIRRSVV---PNVFTYNSLINGFCIHG--------CLGD 832
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ +F MV+ G PD+ + N++I G+ S V D +++F +M + ++F+Y+ LI
Sbjct: 833 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-TYQGLVGDAFTYNTLI 891
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
HG C G+ A+++ + M G P +YN L+ L NG++E+ + + ++ + +
Sbjct: 892 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 951
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
VD ITY ++ +CR + EA L + L K + D Y ++ L
Sbjct: 952 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 999
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 130/300 (43%), Gaps = 33/300 (11%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FR T + +QE +V+ M F +YNT+I + R L+ A
Sbjct: 670 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF-GFVPNVVIYNTVINGLCKNRDLNNA 728
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------------------------- 226
+ VF M+ R +YN L + + G+
Sbjct: 729 LEVFYCMEKK---GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 785
Query: 227 -NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+T++ + R L+K+M+ + P++F+ NS+I G+ + + DA +F M V
Sbjct: 786 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM-VSKG 844
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+ +Y+ LI G C R ++ +L EM +G V + +YN+L+ G++
Sbjct: 845 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 904
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
K M++ D +TY +LD +C G+ +A+ ++++LQ + +D TY ++ L
Sbjct: 905 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 964
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ +M+ G EP I + S++ G+ L N + DA + M V Y PN Y+ LI GL
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM-VKSGYEPNVVVYNTLIDGL 186
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G A EL +EM++KG +YN+L++ L +G + + L +M+++ D
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL 386
+T+ ++D ++G EA +L KE+
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEM 272
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 13/223 (5%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
F + + A +F M +S+ L PSI + L TA N ET+
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPL---PSIVDFTRLLTA--------TANLRRYETVIYFS 94
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
++M GI D++S +I + + ++ AL + +M + Y P+ ++ L+HG C
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKM-MKLGYEPSIVTFGSLLHGFCL 153
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
R +A L M + G+ P+ YN+L+ L NGE+ ++ L EM +K D +T
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
Y T+L +C GR +A ++L+++ +++ D T+T L+DV
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
+M+ G P I +L S++ G+ N +A+ + M + ++PN Y+ +I+GLC
Sbjct: 664 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG-FGFVPNVVIYNTVINGLCKN 722
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
NA E+ M++KG + +YN+L+S L+ +G + + L +M++++ + I +
Sbjct: 723 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 782
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
++D + G EA L KE+ ++++ + +TY L++
Sbjct: 783 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YNT+I + +L+ A+ + M+ + +YN L T G+
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKK---GLGADVVTYNTLLTGLCYSGR------- 226
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ + R + + M+ I PD+ + ++I ++ ++++A ++ +M + + PN+ +Y
Sbjct: 227 WSDAAR-MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM-IQSSVDPNNVTY 284
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ +I+GLC GR +A++ D M KG P+ +YN+L+S V+E +K M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ D TY T++ C+ G+ A+ +
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 125/284 (44%), Gaps = 15/284 (5%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
+ LEL N K+ D TY+ + L + + + ++ M+ S +
Sbjct: 194 IALELLNEMEKKG-LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR-SINPDVVTFTA 251
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
+I F + L A ++K M S P+ +YN + G+ +
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQS---SVDPNNVTYNSIINGLCMHGR--------LYDA 300
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+ F M + G P++ + N++I G+ V++ +++F +M + + F+Y+ LIH
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC-EGFNADIFTYNTLIH 359
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G C G+ + A ++ M + P ++ L+ L +NGE+E + +M E ++ +
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ Y ++ +C+ + +A +L L + + D TYT ++
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+II +L A F M + C P++ +YN L + F +
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASK---GCFPNVVTYNTLISGFCKF-------RMVD 333
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E ++ LF++M +G DIF+ N++I GY + AL IF M V P+ ++
Sbjct: 334 EGMK-LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM-VSRRVTPDIITHCI 391
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM---- 351
L+HGLC G ++A D+M+ +YN ++ L +VE+ WE+
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKA----WELFCRL 447
Query: 352 -IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+E +P D TY ++ +C+ G EA +L++ ++ + +I
Sbjct: 448 PVEGVKP-DARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 23/199 (11%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + +K ++ + +M G YNT+I+ + +A KL+ A V
Sbjct: 848 DVVTYNTLITGFCKSKRVEDGMKLFCEM-TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 906
Query: 196 FKYMKNSRNLEC--RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
F +R ++C P I +YNIL + GK +E + + + ++ D
Sbjct: 907 F-----NRMVDCGVSPDIVTYNILLDCLCNNGK--------IEKALVMVEDLQKSEMDVD 953
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
I + N +I+G ++ + +A +F + GV P++ +Y +I GLC +G + A
Sbjct: 954 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK----PDAIAYITMISGLCRKGLQREAD 1009
Query: 311 ELCDEMKRKGFVPSSKSYN 329
+LC MK GF+PS + Y+
Sbjct: 1010 KLCRRMKEDGFMPSERIYD 1028
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 106/239 (44%), Gaps = 26/239 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF--LSRGKNTYINHV 233
+ +I+ F +LS A+ V M L PSI ++ L F ++R + +
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMK---LGYEPSIVTFGSLLHGFCLVNRIGDAF---- 161
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
L MV G EP++ N++I G + +N AL + ++M + +Y
Sbjct: 162 ------SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK-KGLGADVVTY 214
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L+ GLC GR +A + +M ++ P ++ +L+ G ++E + EMI+
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLD 402
+ +TY ++++ +C GR +A K + +K LI G+ +++D
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 10/194 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ YN L G+ ++ +E L +M G+ D+ + N+++ G S
Sbjct: 174 PNVVVYNTLIDGLCKNGEL----NIALE----LLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+DA R+ M + + P+ ++ LI QG A+EL EM + P++ +Y
Sbjct: 226 RWSDAARMLRDM-MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
NS+++ L ++G + + K M K + +TY T++ C+ E MKL + +
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 389 KNL-IDGYTYTKLL 401
+ D +TY L+
Sbjct: 345 EGFNADIFTYNTLI 358
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 125/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLAS--- 206
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ + P+ + ++I G+
Sbjct: 207 GVQPDVYTYSVLINGLCKENK--------MDDANKLFDEMLVKALVPNGVTFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A +L DEM KG P
Sbjct: 259 KNGRVDLAMEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLKPDARTYTMIIN 395
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF--------------------HQMGVVY-------- 284
DI+ + +I GY+ S + DA+ + H M + Y
Sbjct: 71 DIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 285 ------NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M+ D TY +++ +C+ + +A KL E+ K L+ +G T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTF 250
Query: 398 TKLLD 402
T L+D
Sbjct: 251 TTLID 255
>gi|224124330|ref|XP_002329996.1| predicted protein [Populus trichocarpa]
gi|222871421|gb|EEF08552.1| predicted protein [Populus trichocarpa]
Length = 725
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 141/330 (42%), Gaps = 47/330 (14%)
Query: 91 FRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAA 150
F + L + + L V+ D +++F WA+ Q +F H A TY+ + KLG A
Sbjct: 46 FDVKIQSLRNKLYPDNLIKVLKSTSDVNSAVKIFKWAALQRKFNHTADTYYWIIFKLGMA 105
Query: 151 KMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
+EM+ M+ G E + +++ F +L+ A+ V M + +PS
Sbjct: 106 GNVEEMEGFCQNMVKERC-TGEEDVLVSLVDAFVRNCRLNEAMRVLFNMNLAG---IKPS 161
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM---------- 260
I +N + A + K + + V+ ++K+MV G+ P I +LN +
Sbjct: 162 IDVFNFVLGALVEE-KRGFQDVVF------VYKEMVKAGVAPSIDTLNYLLEVLFETDRV 214
Query: 261 -------------------------IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
IKG I ++ V+D++ I H+M + LP Y
Sbjct: 215 DSALDQYRRINKKGCRPDGKTFEIVIKGLIANDRVDDSVSILHEM-LELGCLPELSFYRT 273
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
I C + R + L +MK F P S Y +L+ L ++E V L EM+E Q
Sbjct: 274 TIPLFCREDRLEEGIRLFRKMKESNFTPDSFIYGALIQCLCKQLRLDEAVNLLEEMMESQ 333
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
D + V++ C+ G+ EA+KLL++
Sbjct: 334 LEGDNNVFVDVVNGFCKLGKINEAVKLLED 363
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 115/273 (42%), Gaps = 21/273 (7%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE-ALYNTIIYFFAEARKLSRA 192
R D T+ I+ + L A + ++++ML C E + Y T I F +L
Sbjct: 230 RPDGKTFEIVIKGLIANDRVDDSVSILHEMLELG--CLPELSFYRTTIPLFCREDRLEEG 287
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F+ MK S P Y L + ++ L ++M+ +E
Sbjct: 288 IRLFRKMKESN---FTPDSFIYGALIQCL--------CKQLRLDEAVNLLEEMMESQLEG 336
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D ++ G+ +N+A+++ V+ + ++ L+ C + A+ L
Sbjct: 337 DNNVFVDVVNGFCKLGKINEAVKLLEDKHVL-----ETSPHNALLRCCCDADKFLMAKGL 391
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++M + + S+N L+ L E+ + + L MI D+ TY ++ CR
Sbjct: 392 LEKMSERN-IDDCDSWNILIRWLCEREEMVKAYELLGRMIISSLIPDYATYSALVAGNCR 450
Query: 373 RGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
+ +A++L +L K ++D +Y++L++ L
Sbjct: 451 LSKYEDALQLFLQLHAKCWILDPASYSELIEGL 483
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 108/254 (42%), Gaps = 18/254 (7%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
K+ F D+ Y + + L E +++ +M+ + G ++ ++ F + K
Sbjct: 295 KESNFTPDSFIYGALIQCLCKQLRLDEAVNLLEEMMES-QLEGDNNVFVDVVNGFCKLGK 353
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
++ AV K +++ LE P +N L K + L ++M
Sbjct: 354 INEAV---KLLEDKHVLETSP----HNALLRCCCDADK--------FLMAKGLLEKMSER 398
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
I+ D S N +I+ + A + +M ++ + +P+ +Y L+ G C + ++
Sbjct: 399 NID-DCDSWNILIRWLCEREEMVKAYELLGRM-IISSLIPDYATYSALVAGNCRLSKYED 456
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L ++ K ++ SY+ L+ L + E VK M E + + + + ++
Sbjct: 457 ALQLFLQLHAKCWILDPASYSELIEGLCRGEKYLEAVKVFCYMSENRCSLQSLPFIMLIK 516
Query: 369 EICRRGRAGEAMKL 382
IC G GEA++L
Sbjct: 517 GICDMGMIGEAVRL 530
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
N+ +Y LI L AQ R K+ + M KG VP S + +L+S LA + ++ +L
Sbjct: 577 NTEAYCILIQSLIAQNRIKDCSMFLNVMINKGLVPDSDTLYNLLSCLAKHSQLYLISVSL 636
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
++ +D Y +++ + + G +A +LL + K + D T+ L+
Sbjct: 637 DKLASDCEVLDSAMYNILINGMWKEGNKNDARRLLDLMLEKGWVPDAMTHGLLI 690
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP------NSFSYDYLIH 298
M+N G+ PD +L +++ L+ H + + V + L +S Y+ LI+
Sbjct: 604 MINKGLVPDSDTLYNLLS--CLAKHSQ-----LYLISVSLDKLASDCEVLDSAMYNILIN 656
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
G+ +G +AR L D M KG+VP + ++ L+ +
Sbjct: 657 GMWKEGNKNDARRLLDLMLEKGWVPDAMTHGLLIGS 692
>gi|218189906|gb|EEC72333.1| hypothetical protein OsI_05540 [Oryza sativa Indica Group]
Length = 747
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 131/286 (45%), Gaps = 15/286 (5%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
+ F +A ++ F + +T+ ++ L + M ++ + + S EA +I
Sbjct: 121 QFFRFAYRRAGFSPEPATFSLLIPILASHSMLNHARCILLDTMPSFSIAPEEATVAALIA 180
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ +A +V +F+ M + L + SYN + A L RG+ +Y
Sbjct: 181 AYGKANIPQESVKLFRLMPD---LGIARTALSYNAVLKAILCRGREAMARRIY------- 230
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
M+ D + PD+ + N++I G+ L + ALR+F M + P+ +Y+ L++
Sbjct: 231 -NAMIADAVTPDLSTYNTLIWGFGLCKKMEAALRVFGDMKD-HGVTPDVTTYNTLLNAWV 288
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G ++AR++ DEM GF +S SYN ++ G+VEE V EM EK +
Sbjct: 289 RAGDLESARKVFDEMPGAGFAQNSVSYNVMIKGYVEAGKVEEAVGLFSEMGEKGLRLSEK 348
Query: 362 TYRTVLDEIC-RRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVL 404
T+ ++ +C GR EA K + ++ + L D + +L+ L
Sbjct: 349 TFAALMPGLCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTL 394
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 124/260 (47%), Gaps = 30/260 (11%)
Query: 159 VVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
+ N M+A TP + YNT+I+ F +K+ A+ VF MK+ P + +YN
Sbjct: 229 IYNAMIADAVTPDL----STYNTLIWGFGLCKKMEAALRVFGDMKDH---GVTPDVTTYN 281
Query: 216 ILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
L A++ G +E+ R +F +M G + S N MIKGY+ + V +A+
Sbjct: 282 TLLNAWVRAGD--------LESARKVFDEMPGAGFAQNSVSYNVMIKGYVEAGKVEEAVG 333
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCA-QGRTKNARELCDEMKRKGFVPSSKS-YNSLVS 333
+F +MG L ++ L+ GLC +GR AR+ D+M + P KS + LV+
Sbjct: 334 LFSEMGEKGLRLSEK-TFAALMPGLCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVT 392
Query: 334 ALALNGEVEETVKNLWEMIE-KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-- 390
L G+++ + + + K VD Y +++ +C G+ A++++ EL K
Sbjct: 393 TLCRAGDLDGALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMDELLEKGTL 452
Query: 391 ------LIDGYTYTKLLDVL 404
+++G Y +++ L
Sbjct: 453 LSPKSPVLEGPAYNPVIEYL 472
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYI---LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
F+Q++ G++ D + NS+I+G+ + + L I + GV + P S + L+
Sbjct: 484 FFRQLMKKGVD-DKAAFNSLIRGHAKEGVPEAAQEILAIMTRRGVRTD--PES--HALLV 538
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
+ +A+ D M +G VPS + S++ AL G V+ + + MIEK
Sbjct: 539 DSFLKKNEPADAKTALDSMMEQGHVPSPSLFMSVMVALFNGGRVQTASRVMKSMIEKGVT 598
Query: 358 VDFITYRTVLDEICRRGRAGEAM 380
+ +L+ + RG EA+
Sbjct: 599 ENMDMAHKILEALFMRGHVEEAI 621
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 108/276 (39%), Gaps = 21/276 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +TY+ + A + V ++M F YN +I + EA K+ AV +
Sbjct: 276 DVTTYNTLLNAWVRAGDLESARKVFDEMPGA-GFAQNSVSYNVMIKGYVEAGKVEEAVGL 334
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP-DI 254
F M + L R S +++ L + + R M + P D
Sbjct: 335 FSEM-GEKGL--RLSEKTFAALMPGLCD-------DEGRVVEARKAMDDMAERRLTPKDK 384
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
++ + ++ AL + + G + L + Y L+ LCA G+ A E+ D
Sbjct: 385 SVFLRLVTTLCRAGDLDGALDVHQKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVEVMD 444
Query: 315 EMKRKGFVPSSKS-------YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
E+ KG + S KS YN ++ L NG + + + + K+ D + +++
Sbjct: 445 ELLEKGTLLSPKSPVLEGPAYNPVIEYLCSNGNTSKA-ETFFRQLMKKGVDDKAAFNSLI 503
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ G A ++L + + + D ++ L+D
Sbjct: 504 RGHAKEGVPEAAQEILAIMTRRGVRTDPESHALLVD 539
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 141/315 (44%), Gaps = 36/315 (11%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA+K+ ++HD STY + L + Y EM ++ +M+ +P T +
Sbjct: 105 VKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQ 164
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME-- 236
+I A+ + +A+ +F +K + C+P+ ++YN + + G+ ++ +Y E
Sbjct: 165 VIRMLGNAKMIGKAITIFYQIKARK---CQPTAQAYNSMIIMLIHEGQYEKVHELYNEMS 221
Query: 237 ---------------------------TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
IR L +M +G++P +I + ++
Sbjct: 222 NEGHCHPDTVTYSALISAFCKLGRQDSAIR-LLNEMKENGMQPTAKIYTMIISLFFKLDN 280
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
V+ AL +F +M +Y P+ F+Y LI GL GR A EM+R+ P + N
Sbjct: 281 VHGALSLFEEMRYMYCR-PDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMN 339
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR-RGRAGEAMKLLKELQN 388
++++ L G +++ +K EM + +TY T++ + + R E + ++
Sbjct: 340 NMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKG 399
Query: 389 KNLIDG-YTYTKLLD 402
+ +TY+ L+D
Sbjct: 400 SGISPSPFTYSILID 414
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 46/306 (15%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R D TY + R LG A E ++M T + N +I F +A +L +
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDT-VVMNNMINFLGKAGRLDDGL 355
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F+ M S C P++ +YN + A + ++ V+ F++M GI P
Sbjct: 356 KLFEEMGVSH---CIPNVVTYNTIIKALFE--SKSRVSEVF-----SWFERMKGSGISPS 405
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS------------- 292
F+ + +I G+ +N + A+ + +M Y L ++
Sbjct: 406 PFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ 465
Query: 293 -------------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
Y +I L GR +A L DEM + G P+ +YN+L+S LA
Sbjct: 466 ELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARAC 525
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYT 398
++E + + +M E D +Y +L+ + + G AM++L ++N + D +Y
Sbjct: 526 MLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYN 585
Query: 399 KLLDVL 404
+L L
Sbjct: 586 TVLSAL 591
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 122 ELFNWAS--KQPRFRHDASTYHIM------TRKLGAAKMY-QEMDDVVNQMLATPSFCGT 172
E+F+W K TY I+ T ++ A M +EMD+ F
Sbjct: 389 EVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE--------KGFPPC 440
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYIN 231
A Y ++I +A++ A +F+ +K + S R Y ++ G+ + IN
Sbjct: 441 PAAYCSLIDALGKAKRYDLACELFQELKENCG---SSSARVYAVMIKHLGKAGRLDDAIN 497
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
LF +M G P++++ N+++ G + +++AL +M + LP+
Sbjct: 498 ---------LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQE-HGCLPDIN 547
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
SY+ +++GL G A E+ MK P + SYN+++SAL+ G EE + + EM
Sbjct: 548 SYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM 607
Query: 352 IEKQRPVDFITYRTVLDEICR 372
D ITY ++L+ I +
Sbjct: 608 NALGFEYDLITYSSILEAIGK 628
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 47/265 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTII E++ SR VF + + + PS +Y+IL F + +
Sbjct: 373 YNTIIKALFESK--SRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNR--------I 422
Query: 236 ETIRCLFKQMVNDGIEP----------------------DIFS-------------LNSM 260
E L ++M G P ++F M
Sbjct: 423 EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVM 482
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
IK + ++DA+ +F +M + PN ++Y+ L+ GL A +M+ G
Sbjct: 483 IKHLGKAGRLDDAINLFDEMSKL-GCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHG 541
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
+P SYN +++ LA G ++ L M D ++Y TVL + G EA
Sbjct: 542 CLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAA 601
Query: 381 KLLKELQNKNL-IDGYTYTKLLDVL 404
+L+KE+ D TY+ +L+ +
Sbjct: 602 ELMKEMNALGFEYDLITYSSILEAI 626
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 152/303 (50%), Gaps = 23/303 (7%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQ--PRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM 163
++ +M ++D + +F+ A+ + + HD S++ M +L +A ++ +D++ +M
Sbjct: 18 QVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRM 77
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
+ +E + +I + + ++ VF MK+ +C PS ++Y + +
Sbjct: 78 -KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKD---FDCDPSQKAYVTVLAILVE 133
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA-LRIFHQMGV 282
+ +N + +K M G+ P + SLN +IK ++ DA L+IF +M
Sbjct: 134 ENQ---LNLAFK-----FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPK 185
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
P+S++Y LI GLC GR A++L EM K P+ +Y SL++ L + V+
Sbjct: 186 -RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK----NLIDGYTYT 398
E ++ L EM K + TY +++D +C+ GR+ +AM+L + + + N++ TYT
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV---TYT 301
Query: 399 KLL 401
L+
Sbjct: 302 TLI 304
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 16/233 (6%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
++ Y T++ E +L+ A FK+ KN R + P++ S N+L A L R T
Sbjct: 120 SQKAYVTVLAILVEENQLNLA---FKFYKNMREIGLPPTVASLNVLIKA-LCRNDGTVDA 175
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ +F +M G +PD ++ ++I G +++A ++F +M V + P
Sbjct: 176 GLK------IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM-VEKDCAPTVV 228
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y LI+GLC A +EMK KG P+ +Y+SL+ L +G + ++ L+EM
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME-LFEM 287
Query: 352 IEKQ--RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ + RP + +TY T++ +C+ + EA++LL + + L D Y K++
Sbjct: 288 MMARGCRP-NMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 20/237 (8%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T Y ++I ++ + A+ + MK S+ +E P++ +Y+ L G++
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMK-SKGIE--PNVFTYSSLMDGLCKDGRSLQA- 281
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
ME LF+ M+ G P++ + ++I G + +A+ + +M + P++
Sbjct: 282 ---ME----LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNL-QGLKPDAG 333
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS-------KSYNSLVSALALNGEVEET 344
Y +I G CA + + A DEM G P+ K+ N +V L N
Sbjct: 334 LYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAF 393
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
L M + V+ T +++ +C++G +A++L+ E+ I KLL
Sbjct: 394 TLYL-SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ ++ L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHGAKNAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF RG+ YM + R F +MVN+GIEP + N +I G+ LS V A
Sbjct: 118 YDALFKVISRRGR-------YMMSKR-YFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F + P+ +Y+ +I+G + + A + EMK K P+ +Y +L+
Sbjct: 170 NRFFEDLK-SREITPDVVTYNTMINGYTRVKKMEEAEKYFLEMKEKKIDPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
A V++ ++ + EM + ITY T+L +C + EA LLKE+ +K
Sbjct: 229 GYASIDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCDAEKMSEARSLLKEMVDK 284
>gi|255660872|gb|ACU25605.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 484
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 13/298 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSNTXEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEE---LXVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YNALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMKS-REISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA JLKE+ +K L
Sbjct: 229 GYVSVDQVDDALRLVZEMKGXGIKPNAITYSTLLPGLCNAEKMSEARVJLKEMMDKYL 286
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMING 194
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
+ K ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 195 YYRVKK--------MEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVZEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
PN+ +Y L+ GLC + AR J EM K P+ S + L+ + +G
Sbjct: 247 KGX-GIKPNAITYSTLLPGLCNAEKMSEARVJLKEMMDKYLAPTDNSIFMRLIXSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHXGXLIENFCKVGQYDKAVKLLDKLIEKDII 358
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 49/275 (17%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS------ 202
AA ++++M++ Q+ Y+T+I+ + R+++ A+ +F YMK
Sbjct: 99 AAGLFKKMEEAGCQL--------NVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTI 150
Query: 203 --------------------------RNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
+L P++ ++N+L F GK V
Sbjct: 151 FTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGV--- 207
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
K M G+EPD+ + NS++ GY + V +A ++F M + P+ FSY L
Sbjct: 208 -----LKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVM-ITKGCKPDVFSYSIL 261
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I+G C R A++L +EM +G P++ SYN+L+ L G + E M
Sbjct: 262 INGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGN 321
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ TY +LD C++G G+A +L + +Q+ L
Sbjct: 322 LPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYL 356
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 117/250 (46%), Gaps = 17/250 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + + L ++E ++N+M + + +N ++ F + K+ A V K
Sbjct: 152 TYTSLIQGLCNFSRWKEASALLNEM-TSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKT 210
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI--RCLFKQMVNDGIEPDIFS 256
M + P + +YN L + ++ E + R LF M+ G +PD+FS
Sbjct: 211 MTE---MGVEPDVVTYNSLMYGY----------SMWTEVVEARKLFDVMITKGCKPDVFS 257
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
+ +I GY + +++A ++F++M + PN+ SY+ LIHGLC GR + A++L M
Sbjct: 258 YSILINGYCKAKRIDEAKQLFNEM-IHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNM 316
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
G +P+ +Y L+ G + + + M + + Y +++ +C+ G
Sbjct: 317 HTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNL 376
Query: 377 GEAMKLLKEL 386
+A +L EL
Sbjct: 377 KDARELFSEL 386
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I + +A+++ A +F M + + P+ SYN L G+ +
Sbjct: 258 YSILINGYCKAKRIDEAKQLFNEMIHQGS---TPNNVSYNTLIHGLCQLGR--------L 306
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LFK M +G P++++ ++ G+ ++ A R+F M Y PN Y+
Sbjct: 307 REAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTY-LKPNLVMYNI 365
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L++ +C G K+AREL E+ G P+ + Y ++++ L G ++E ++ M +
Sbjct: 366 LVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDG 425
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
P D +Y ++ + A+ L+ E++++ I
Sbjct: 426 CPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFI 462
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 10/215 (4%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L R F + L +P+I ++ L GK + + + LF MV
Sbjct: 22 QLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK-------FAQAVE-LFDDMVA 73
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G +PD ++ ++I G A +F +M L N +Y LIH LC R
Sbjct: 74 RGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQL-NVVTYSTLIHSLCKYRRVN 132
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A ++ MK K P+ +Y SL+ L +E L EM + +T+ ++
Sbjct: 133 EALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLV 192
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D C+ G+ A +LK + + D TY L+
Sbjct: 193 DTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLM 227
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+ P+ +LN +I + V+ + + G+ P ++ LI+GL G+
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAK-GIKLGLQPTIVTFTTLINGLGKVGKFAQ 63
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A EL D+M +G P +Y ++++ L GE +M E ++ +TY T++
Sbjct: 64 AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIH 123
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+C+ R EA+ + ++ K++ +TYT L+ L
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGL 160
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G++P I + ++I G A+ +F M V P+ ++Y +I+GLC G T
Sbjct: 40 GLQPTIVTFTTLINGLGKVGKFAQAVELFDDM-VARGCQPDDYTYTTIINGLCKIGETAL 98
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L +M+ G + +Y++L+ +L V E + M K TY +++
Sbjct: 99 AAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQ 158
Query: 369 EICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+C R EA LL E+ + N++ + T+ L+D
Sbjct: 159 GLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVD 193
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 154/319 (48%), Gaps = 18/319 (5%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASK-QPRFRHDASTYHIMTRKLGAAKM 152
+ P R + L +++T Q++ + L++F +A K P F H+ TYH + KL A+
Sbjct: 37 TIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARA 96
Query: 153 YQEMDDVVNQMLAT--PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
+ ++ ++ + + P CG E L+ ++ + A + ++ +F + + + S
Sbjct: 97 FDPVESLMADLRNSYPPIKCG-ENLFIDLLRNYGLAGRYESSMRIFLRIPD---FGVKRS 152
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND-GIEPDIFSLNSMIKGYILSNH 269
+RS N L N I + + + +FK GI P+IF+ N ++K N
Sbjct: 153 VRSLNTLL--------NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKND 204
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ A ++ ++ + +PN +Y ++ G A+G ++A+ + +EM +G+ P + +Y
Sbjct: 205 IESAYKVLDEIPAM-GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYT 263
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
L+ G E + +M + + + +TY ++ +C+ ++GEA + E+ ++
Sbjct: 264 VLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDR 323
Query: 390 NLI-DGYTYTKLLDVLEDD 407
+ + D K++D L +D
Sbjct: 324 SFMPDSSLCCKVIDALCED 342
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +Y + +++RG ME+ + + ++M++ G PD + ++ GY
Sbjct: 222 PNLVTYTTILGGYVARGD--------MESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLG 273
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++A + M PN +Y +I LC + ++ AR + DEM + F+P S
Sbjct: 274 RFSEAATVMDDMEK-NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLC 332
Query: 329 NSLVSALALNGEVEETVKNLW-EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
++ AL + +V+E LW +M++ D T++ +C+ GR EA KL E
Sbjct: 333 CKVIDALCEDHKVDEAC-GLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFD 391
Query: 388 NKNLIDGYTYTKLL 401
++ TY L+
Sbjct: 392 KGSIPSLLTYNTLI 405
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L+++M+ + PD L+++I V++A ++F + +P+ +Y+ LI G+
Sbjct: 351 LWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFD--KGSIPSLLTYNTLIAGM 408
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A L D+M + P++ +YN L+ L+ NG V+E V+ L EM+E +
Sbjct: 409 CEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNK 468
Query: 361 ITYRTVLDEICRRGRAGEAMKLL 383
T+ + + + + G+ +A+K++
Sbjct: 469 TTFLILFEGLQKLGKEEDAIKIV 491
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 53/334 (15%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ Q+DPL L +FN K+ F+H TY M KLG + M+ V+ +M
Sbjct: 13 VLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDN 72
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
E +Y + + + K+ AV VF+ M C PSI SYN + + G
Sbjct: 73 SLLEGVYVSAMRNYGRKGKVQEAVDVFERMD---FYNCEPSIFSYNAIMNILVEYGYFNQ 129
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------G 281
+ VY+ +M ++GI PD+ + IK + + ALR+ + M
Sbjct: 130 AHKVYL--------RMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNA 181
Query: 282 VVY----------NY----------------LPNSFSYDYLIHGLCAQGRTKNARELCDE 315
VVY NY P+ +++ L+H LC +G + +L ++
Sbjct: 182 VVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNK 241
Query: 316 MKRKGFVPSSKSYNSLVSAL-------ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
+ + G P+ ++N + L N +V E L +M+ K D TY T++
Sbjct: 242 VLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIY 301
Query: 369 EICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ G+ +A ++LK+ + K + D +TY L+
Sbjct: 302 GYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLI 335
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 129/288 (44%), Gaps = 10/288 (3%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY 176
PL L L N Q +A Y + E ++ N+ML F A +
Sbjct: 162 PLAALRLLNNMPSQG-CELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHI-ATF 219
Query: 177 NTIIYFFAEARKLSRAVYVF-KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
N +++ + L + K +KN C P++ ++NI +G N +
Sbjct: 220 NKLMHILCKKGHLQEGEKLLNKVLKNGV---C-PNLFTFNIFIQGLCRKGVLEGANSKVV 275
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L K MVN G+EPD F+ N++I GY + DA RI ++P+ F+Y
Sbjct: 276 EAENYLHK-MVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD-AKFKGFVPDEFTYCS 333
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G+C G +A L +E KG PS YN+L+ L+ G V + ++ + +M ++
Sbjct: 334 LIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEG 393
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLD 402
D TY V++ +C+ G +A LL K L D +T+ L+D
Sbjct: 394 MSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLID 441
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 111/225 (49%), Gaps = 12/225 (5%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
F E Y ++I + + A+ +F+ + +PSI YN L +G
Sbjct: 323 GFVPDEFTYCSLIIGVCQDGDIDHALALFE---EALGKGLKPSIVLYNTLIKGLSQQG-- 377
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
+ ++ ++ L M +G+ PDI++ N +I G V+DA + + + YL
Sbjct: 378 -----LVLKALQ-LMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNA-AIAKGYL 430
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+ F+++ LI G C + + NA + D M G P +YNS+++ L + E+ ++
Sbjct: 431 PDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMET 490
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++EK + ITY +++ +C+ + EA+ LL+E++N+ LI
Sbjct: 491 FKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLI 535
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P I ++N L + R K M+ + M + G+ PD+ + NS++ G +
Sbjct: 431 PDIFTFNTLIDGYCKRLK--------MDNAIGILDSMWSHGVTPDVITYNSILNGLCKAA 482
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
D + F +M + LPN +Y+ LI LC + A +L +E++ +G +P S+
Sbjct: 483 KPEDVMETF-KMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSF 541
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDEICRRGRAGEAMKLLKEL 386
+++S NG+++E + L+ +E+Q + TY +++ + A KL E+
Sbjct: 542 GTVISGFCNNGDLDEAYQ-LFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEM 600
Query: 387 QNKNL-IDGYTYTKLLD 402
+K D YTY ++D
Sbjct: 601 GDKGCDPDSYTYRVMID 617
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
LYNT+I ++ + +A+ + M + P I +YN++ G + N+
Sbjct: 364 VLYNTLIKGLSQQGLVLKAL---QLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANN- 419
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
L + G PDIF+ N++I GY +++A+ I M + P+ +Y
Sbjct: 420 -------LLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWS-HGVTPDVITY 471
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ +++GLC + ++ E + KG +P+ +YN L+ +L +V E + L E+
Sbjct: 472 NSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRN 531
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+ D +++ TV+ C G EA +L + ++ +
Sbjct: 532 RGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQ 567
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 106/263 (40%), Gaps = 52/263 (19%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+I+ +A K + FK + C P+I +YNIL + K T
Sbjct: 471 YNSILNGLCKAAKPEDVMETFKMIMEKG---CLPNIITYNILIESLCKARKVT------- 520
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG---------VVYNY 286
E + L +++ N G+ PD S ++I G+ + +++A ++F +M YN
Sbjct: 521 EALD-LLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNI 579
Query: 287 L--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+ P+S++Y +I G C G + + + G
Sbjct: 580 MINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIG 639
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
FVPS ++ +++ L + V E V + M+ + + T+ D +A A
Sbjct: 640 FVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV--TIFDA---DKKAVAAP 694
Query: 381 KLLKE-LQNKNLIDGYTYTKLLD 402
K++ E L K+ I Y Y L D
Sbjct: 695 KIIVEDLLKKSHITYYAYELLYD 717
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 145/344 (42%), Gaps = 69/344 (20%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F+ D +Y + + L AAK +++++++ +M+ E ++ ++ FF + RA
Sbjct: 246 FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCM-PNEVTFDMLVRFFCRGGMVERA 304
Query: 193 VYV--------------------------------FKYMKNSRNLECRPSIRSYNILFTA 220
+ V F+++ N + C P SY +
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 364
Query: 221 FLSRG---------------KNTYINHVYMETIRC-------------LFKQMVNDGIEP 252
L R KN N V T C L +QM G E
Sbjct: 365 -LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+I + N+++ G+ + V+ AL +F+ M PN+ +Y L+ GLC R A EL
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAEL 479
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM +K P+ ++N LVS G ++E ++ + +M+E + ITY T+LD I
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITN 539
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFGNSIR 413
+ EA++LL L + + D TY+ ++ VL ED +I+
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIK 583
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 19/258 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
DA TY + R L E +++ ML PS Y ++ ++ +A
Sbjct: 144 DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV----VTYTVLLEAVCKSTGFGQA 199
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ V M R C P+I +YN++ G+ ++ R ++ + G +P
Sbjct: 200 MEVLDEM---RAKGCTPNIVTYNVIINGMCREGR--------VDDAREFLNRLSSYGFQP 248
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D S +++KG + D +F +M + N +PN ++D L+ C G + A ++
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEM-MEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 307
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++M G ++ N +++ + G V++ + L M D I+Y TVL +CR
Sbjct: 308 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCR 367
Query: 373 RGRAGEAMKLLKELQNKN 390
R +A +LLKE+ KN
Sbjct: 368 AERWEDAKELLKEMVRKN 385
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G D+F+ N+++ GY ++ A R+ M V P++++Y +I GLC +GR
Sbjct: 108 GTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA----PDAYTYTPIIRGLCDRGRVGE 163
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L D+M +G PS +Y L+ A+ + + ++ L EM K + +TY +++
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+CR GR +A + L L + D +YT +L L
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 18/240 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ A +L A + M +C P++ ++N+L + F +G M
Sbjct: 460 YTTLLTGLCNAERLDAAAELLAEMLQK---DCAPNVVTFNVLVSFFCQKG--------LM 508
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
+ L +QM+ G P++ + N+++ G + +AL + H G+V N + P+ +Y
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLH--GLVSNGVSPDIVTYS 566
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I L + R + A ++ ++ G P + YN ++ AL + + M+
Sbjct: 567 SIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN 626
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNSIRH 414
+ +TY T+++ + E LL+EL ++ +++ LL+ F N H
Sbjct: 627 GCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLN----KNLLEEWRPKFSNKTVH 682
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+ ++ I + + +A R+ + P+ + LI LC +GRT +A + +
Sbjct: 47 NARLRRLIARDDLAEAARLVDR-ATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAE 105
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDEICRRGR 375
R G +YN+LV+ G+++ + + M PV D TY ++ +C RGR
Sbjct: 106 RSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM-----PVAPDAYTYTPIIRGLCDRGR 160
Query: 376 AGEAMKLLKELQNKNLIDG-YTYTKLLDVL--EDDFGNSI 412
GEA+ LL ++ ++ TYT LL+ + FG ++
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 154 KEGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMHASG-- 207
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 208 -VHPDVYTYSVLINGLCKESK--------MDDANKLFDEMLEKGLVPNSVTFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A +L DEM G P
Sbjct: 259 KNGWVDLAMEIYKQM-LSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLKPDTRTYTMIIN 395
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
Y + + ++ L+H C +G + A+ + D + + G PS SYN+L++ G+++E
Sbjct: 137 GYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ M D TY +++ +C+ + +A KL E+ K L+ + T+T L+D
Sbjct: 197 FRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLID 255
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 173/400 (43%), Gaps = 57/400 (14%)
Query: 57 LCSCYSAIALSRSSSR--GVGKRSKADSKPALDDTQFRCAVSELPP----RFNNEELCNV 110
+C C + S SSR GV + S+P+ PP R E++ +
Sbjct: 129 VCCCSGVLGGSPPSSRTAGVSSPGLSPSRPSKRRIGRARVQPRAPPPCDERRAAEDVIHA 188
Query: 111 MTLQEDPLVCLELFNWASKQPRFRHDASTYHIM---TRKLGAAKMYQEMDDVVNQMLATP 167
+ + P LE F A+++PR ++ + M R G E+ DV+ + +
Sbjct: 189 LRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDVMQRQIVKA 248
Query: 168 SF---------CGTEA----------------------LYNTIIYFFAEARKLSRAVYVF 196
+ G E YN ++YF ++ A+ V+
Sbjct: 249 NVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVY 308
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
+ M + PS+R+Y++L AF R +ET+ L ++M G++P+++S
Sbjct: 309 RVMMVDGVV---PSVRTYSVLMVAFGKRRD--------VETVLWLLREMEAHGVKPNVYS 357
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
I+ + ++A RI +M P+ ++ LI LC GR +A+++ +M
Sbjct: 358 YTICIRVLGQAKRFDEAYRILAKM-ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 416
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD-FITYRTVLDEICRRGR 375
K+ P +Y +L+ NG+ ++V +W ++ D + Y V+D +C+ GR
Sbjct: 417 KKSDQKPDRVTYITLLDKFGDNGD-SQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 475
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLD--VLEDDFGNSI 412
EA+++ E++ K ++ + Y+Y L+ + D FG+++
Sbjct: 476 VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 515
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 42/264 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+++ +G + +EM V +M + T YNTII ++R+L +A+ +
Sbjct: 914 DEFTYNLLLDAMGKSMRIEEMLKVQEEM-HRKGYESTYVTYNTIISGLVKSRRLEQAIDL 972
Query: 196 F-------------------------KYMKNSRNL-------ECRPSIRSYNILFTAFLS 223
+ ++++ NL C+ + YNIL
Sbjct: 973 YYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRI 1032
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
G + H LF+ MV+ GI PDI S +I + +ND L F Q+ +
Sbjct: 1033 AGNTEKVCH--------LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQL-LE 1083
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
P+ +Y+ LI GL R + A L +EM++KG VP+ +YNSL+ L G+ E
Sbjct: 1084 MGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAE 1143
Query: 344 TVKNLWEMIEKQRPVDFITYRTVL 367
K E++ K + TY ++
Sbjct: 1144 AGKMYEELLTKGWKPNVFTYNALI 1167
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 134/328 (40%), Gaps = 65/328 (19%)
Query: 126 WASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
W K+ + D TY + K G Q + ++ N M A + Y +I +
Sbjct: 414 WKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKAD-GYNDNVVAYTAVIDALCQ 472
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------------------N 227
++ A+ +F MK + P SYN L + FL + N
Sbjct: 473 VGRVFEALEMFDEMKQKGIV---PEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 529
Query: 228 TYINHVYM-------ETIRCL--FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
Y + +++ E+I+ + ++ M + GI PD+ + N+++ G S + A R+FH
Sbjct: 530 GYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFH 589
Query: 279 Q---MGV-----VY--------------------------NYLPNSFSYDYLIHGLCAQG 304
+ MGV Y N +P+ + + LI L G
Sbjct: 590 ELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAG 649
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R A + ++K P+ +YN+L++ L G+V+E + L EM P + ITY
Sbjct: 650 RGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYN 709
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLI 392
T+LD +C+ G +A+ +L + K I
Sbjct: 710 TILDCLCKNGAVNDALDMLYSMTTKGCI 737
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 134/330 (40%), Gaps = 70/330 (21%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI-IYFFAEARKLSRAVYVFK 197
+Y I R LG AK + E ++ +M C + + +T+ I +A ++S A VF
Sbjct: 357 SYTICIRVLGQAKRFDEAYRILAKM--ENEGCKPDVITHTVLIQVLCDAGRISDAKDVFW 414
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV---------------YMETIRCL- 241
MK S + +P +Y L F G + + + Y I L
Sbjct: 415 KMKKS---DQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALC 471
Query: 242 -----------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV-------- 282
F +M GI P+ +S NS+I G++ ++ DAL +F M +
Sbjct: 472 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 531
Query: 283 ----VYNY----------------------LPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
NY +P+ + + ++ GL GR A+ + E+
Sbjct: 532 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 591
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
K G P + +Y ++ + + +E VK ++MIE D + +++D + + GR
Sbjct: 592 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRG 651
Query: 377 GEAMKLLKELQNKNL--IDGYTYTKLLDVL 404
EA ++ +L+ NL DG TY LL L
Sbjct: 652 DEAWRIFYQLKEMNLEPTDG-TYNTLLAGL 680
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 105/220 (47%), Gaps = 13/220 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +++ A++ +L A VF +K + P +Y ++ K + E
Sbjct: 569 NAVLFGLAKSGRLGMAKRVFHELKA---MGVSPDTITYTMMIKCCSKASK-------FDE 618
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
++ +F M+ + PD+ ++NS+I + ++A RIF+Q+ + N P +Y+ L
Sbjct: 619 AVK-IFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM-NLEPTDGTYNTL 676
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ GL +G+ K L +EM + P+ +YN+++ L NG V + + L+ M K
Sbjct: 677 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 736
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
D +Y TV+ + + R EA + +++ K LI Y
Sbjct: 737 IPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYA 775
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 32/256 (12%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------- 226
LYN++I + + A +F MK L C P +YN+L A +
Sbjct: 881 GLYNSLICGLVDENLIDIAEGLFAEMKE---LGCGPDEFTYNLLLDAMGKSMRIEEMLKV 937
Query: 227 ----------------NTYINHVY----METIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
NT I+ + +E L+ +++ G P + ++ G +
Sbjct: 938 QEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLK 997
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ + DA +F++M + Y N Y+ L++G G T+ L +M +G P K
Sbjct: 998 AGRIEDAENLFNEM-LEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIK 1056
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
SY ++ L G++ + + +++E D ITY ++D + + R EA+ L E+
Sbjct: 1057 SYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEM 1116
Query: 387 QNKNLIDG-YTYTKLL 401
Q K ++ YTY L+
Sbjct: 1117 QKKGIVPNLYTYNSLI 1132
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L K+ + G+ NS+I G + N ++ A +F +M + P+ F+Y+ L+ +
Sbjct: 867 LVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL-GCGPDEFTYNLLLDAM 925
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
R + ++ +EM RKG+ + +YN+++S L + +E+ + + ++ +
Sbjct: 926 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 985
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL 386
TY +LD + + GR +A L E+
Sbjct: 986 CTYGPLLDGLLKAGRIEDAENLFNEM 1011
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 103/257 (40%), Gaps = 32/257 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKN------SRNLECRPSIRSYNILFTA-------FL 222
YNT+IY + + + A +F MK + PS ++ A FL
Sbjct: 743 YNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFL 802
Query: 223 SRGKNTYIN--HVYMETI--------RCLFKQMV-NDGIEPDIFSLNSMIKGYILSNHVN 271
G T + H ME I F +++ + GI D F L +IK
Sbjct: 803 QPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKAL 862
Query: 272 DA---LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+A ++ F GV + Y+ LI GL + A L EMK G P +Y
Sbjct: 863 EAHELVKKFKSFGVSL----KTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTY 918
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N L+ A+ + +EE +K EM K ++TY T++ + + R +A+ L L +
Sbjct: 919 NLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 978
Query: 389 KNLIDGY-TYTKLLDVL 404
+ TY LLD L
Sbjct: 979 QGFSPTPCTYGPLLDGL 995
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 114/287 (39%), Gaps = 53/287 (18%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTEALYNTIIYFFAEARKLS 190
F TY + L A ++ +++ N+ML + C +YN ++ A
Sbjct: 981 FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANC---TIYNILLNGHRIAGNTE 1037
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVYMETIRCLFKQMVNDG 249
+ ++F+ M + P I+SY I+ G+ N + + F+Q++ G
Sbjct: 1038 KVCHLFQDMVDQ---GINPDIKSYTIIIDTLCKAGQLNDGLTY---------FRQLLEMG 1085
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYN--------------------- 285
+EPD+ + N +I G S + +A+ +F++M G+V N
Sbjct: 1086 LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAG 1145
Query: 286 ----------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+ PN F+Y+ LI G G T +A M G +P+S + +S S+
Sbjct: 1146 KMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTDSSNCSSP 1205
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
G V + + + + P +R + RR AG A ++
Sbjct: 1206 EAVGTVRKQITSHRSYHNAKEPTT-KAWRWLSKGCLRRAAAGNAQQI 1251
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 130/329 (39%), Gaps = 76/329 (23%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
TY I+ L A+ +++ + N+M A + G LY +I + A + RA V
Sbjct: 202 GTYTILVDSLSTARDISKVEALFNEMKAN-NVVGDVYLYTAVINAYCRAGNMRRAAKVLD 260
Query: 198 YMKNSRNLEC-----RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
EC P+ R+Y +L F G+ ME L M G+
Sbjct: 261 --------ECVGNGVEPNERTYGVLIKGFCKIGQ--------MEAAEMLLADMQGQGVGL 304
Query: 253 DIFSLNSMIKGYILSNHVNDALRI----------------------FHQMGVVYNYL--- 287
+ N+MI GY V+DAL+I +MGVV NY+
Sbjct: 305 NQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYT 364
Query: 288 ----------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
P+ +Y +IHG +GR + A EM++K
Sbjct: 365 TLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKK 424
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
GFVP +Y SLV +NG+V+ +K EM ++ + + Y ++ + + GR+ A
Sbjct: 425 GFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAA 484
Query: 380 MKLLKELQNKNLI-DGYTYTKLLDVLEDD 407
+L ++ LI D Y+ L+ L D
Sbjct: 485 FQLYDDMLKAGLIPDDSLYSALVGSLHTD 513
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ F+ ++ GLC GR +AR L D+M R G ++ YNSL+ + + V+ +
Sbjct: 130 SPFAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKD-DGRVQEI 188
Query: 349 WEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
E++E + TY ++D + + L E++ N++ D Y YT +++
Sbjct: 189 LEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVIN 244
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 10/206 (4%)
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
+M N + P++ +Y L + S+GK IN + +R L+ +M GI P I++
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGK---IN----KALR-LYHEMTGKGIAPSIYTF 510
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
+++ G + + DA+++F++M +N PN +Y+ +I G C +G A E EM
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG VP + SY L+ L L G+ E + + + ++ I Y +L CR G+
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 378 EAMKLLKELQNKNL-IDGYTYTKLLD 402
EA+ + +E+ + + +D Y L+D
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLID 655
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN +I + RK A +F M + RP+ +Y+IL F RGK
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGK---IGLRPNDVTYSILIDMFCRRGK-------- 417
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++T +MV+ G++ ++ NS+I G+ ++ A +M + P +Y
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM-INKKLEPTVVTYT 476
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ G C++G+ A L EM KG PS ++ +L+S L G + + VK EM E
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ +TY +++ C G +A + LKE+ K ++ D Y+Y L+
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 135/343 (39%), Gaps = 65/343 (18%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY--------------QEMDDVV 160
+DP + L FN+ F H +++ I+ L A ++ + DV
Sbjct: 82 DDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVF 141
Query: 161 NQMLATPSFC--GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
N + + C + + ++ +I + +R++ V VFK M +L P +R+ + L
Sbjct: 142 NVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSL--LPEVRTLSALL 199
Query: 219 TAFLSRGKNTYINH--VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
+ H + ME LF MV+ GI PD++ +I+ ++ A +
Sbjct: 200 HGLVK------FRHFGLAME----LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 277 FHQMG--------VVYNYL--------------------------PNSFSYDYLIHGLCA 302
M V YN L P+ +Y L++GLC
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ E+ DEM F PS + +SLV L G++EE + + +++ +
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
Y ++D +C+ + EA L + L + TY+ L+D+
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 17/285 (5%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YN 177
+ +ELFN R D Y + R L K +++ M AT C + YN
Sbjct: 210 LAMELFN-DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATG--CDVNIVPYN 266
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
+I + +K+ AV + K + + +P + +Y L L + + I M+
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGK---DLKPDVVTYCTLVYG-LCKVQEFEIGLEMMDE 322
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ CL P +++S+++G + +AL + ++ V + PN F Y+ LI
Sbjct: 323 MLCL-------RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV-VDFGVSPNLFVYNALI 374
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
LC + A L D M + G P+ +Y+ L+ G+++ + L EM++
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+ Y ++++ C+ G A + E+ NK L TYT L+
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 15/234 (6%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y +++ F KL A+ V + M R ++ + Y +L L H
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQEMVQ-RGVDL--DLVCYGVLIDGSL--------KH 660
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ L K+M + G++PD SMI + +A I+ M + +PN +
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM-INEGCVPNEVT 719
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE-ETVKNLWEM 351
Y +I+GLC G A LC +M+ VP+ +Y + L GEV+ + L
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT-KGEVDMQKAVELHNA 778
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
I K + TY ++ CR+GR EA +L+ + + D TYT +++ L
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN+L F +G+ +E L +M+ DG+ PD + +MI N V
Sbjct: 789 TYNMLIRGFCRQGR--------IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A+ +++ M P+ +Y+ LIHG C G A EL +EM R+G +P++K+ +
Sbjct: 841 AIELWNSM-TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTT 899
Query: 333 S 333
S
Sbjct: 900 S 900
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 36/187 (19%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-------------------- 280
++ M+N+G P+ + ++I G + VN+A + +M
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 281 --------------GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++ L N+ +Y+ LI G C QGR + A EL M G P
Sbjct: 764 KGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 327 SYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y ++++ L +V++ ++ LW M EK D + Y T++ C G G+A +L E
Sbjct: 824 TYTTMINELCRRNDVKKAIE-LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 386 LQNKNLI 392
+ + LI
Sbjct: 883 MLRQGLI 889
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 120/233 (51%), Gaps = 19/233 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLE-CRPSIRSYNILFTAFLSRGKNTYINHVY 234
Y+ +I F KL A+ +F N LE +P ++NIL F K
Sbjct: 115 YSALISGFFVVGKLKDAIDLF----NKIILENIKPDGYTFNILVDGFCKDRK-------- 162
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--GVVYNYLPNSFS 292
M+ + +F M+ GI PD+ + NS++ GY L VN A IF+ M G V P+ S
Sbjct: 163 MKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVN---PDIRS 219
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI+G C + A L +EM K +P+ +YNSL+ L+ +G + ++ + +M
Sbjct: 220 YNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMH 279
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
++ P + +TY +++D + + + +A+ L+ + +++ + YTYT L+D L
Sbjct: 280 DRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGL 332
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF-LSRGKNTYINHVY 234
+N ++ F + RK+ VF M + P + +YN L + L + NT
Sbjct: 150 FNILVDGFCKDRKMKEGKTVFAMMMKQGII---PDVVTYNSLVDGYRLVKEVNT------ 200
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+ +F M G+ PDI S N +I G+ V+ A+ +F++M N +PN +Y+
Sbjct: 201 ---AKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHC-KNIIPNVVTYN 256
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GL GR A +L D+M +G P+ +YNS++ AL +V++ + + + ++
Sbjct: 257 SLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQ 316
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
TY ++D +C+ GR +A + ++L
Sbjct: 317 GIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G P+ +LN++IKG L ++ A +FH V + + SY LIHGLC G T+
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAF-LFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L + K ++ YN+++ + + V + EM+ K + +TY ++
Sbjct: 61 ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
G+ +A+ L ++ +N+ DGYT+ L+D
Sbjct: 121 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVD 155
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 138/266 (51%), Gaps = 10/266 (3%)
Query: 140 YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYM 199
+ ++ + G A + ++ D+ ++M T +N+++ + RA+ + ++
Sbjct: 128 FIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHV 187
Query: 200 KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNS 259
++ + P++ ++N++ A G + + I+ +F+ M EPD+++ +
Sbjct: 188 IGAKGVSISPNVLTFNLVIKAMCKVG-------LVDDAIQ-VFRDMTIRKCEPDVYTYCT 239
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
++ G ++ +++A+ + +M + P+ +++ LI+GLC +G A +L D M K
Sbjct: 240 LMDGLCKADRIDEAVSLLDEMQI-DGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLK 298
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G +P+ +YN+L+ L L G++E+ + L M+ + + +TY T+++ + ++GRA +
Sbjct: 299 GCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDG 358
Query: 380 MKLLKELQNKN-LIDGYTYTKLLDVL 404
+L ++ + ++ Y Y+ L+ L
Sbjct: 359 ACVLALMEERGYCVNEYVYSTLISGL 384
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 118/247 (47%), Gaps = 17/247 (6%)
Query: 148 GAAKMYQEMDDV-VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
G K + +D V ++ +C E +Y+T+I + K A+++FK M + E
Sbjct: 348 GLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEM-TVKGYE 406
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
+ Y+ + GK V E M N G P+ ++ +S++KG+
Sbjct: 407 LNTIV--YSAVIDGLCRDGKPDDAVEVLSE--------MTNKGCTPNAYTCSSLMKGFFE 456
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ + + A+ ++ M +N+ N Y LIHGLC G+ K A + +M KG P
Sbjct: 457 AGNSHRAVEVWKDMAK-HNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVV 515
Query: 327 SYNSLVSALALNGEVEETVKNLWEMI---EKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+Y+S+++ L++ G VE+ ++ EM+ +P D +TY +L+ +C++ A+ LL
Sbjct: 516 AYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQP-DVVTYNILLNTLCKQSSISRAIDLL 574
Query: 384 KELQNKN 390
+ ++
Sbjct: 575 NSMLDRG 581
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ +A ++ AV + M+ C PS ++N+L +G +
Sbjct: 237 YCTLMDGLCKADRIDEAVSLLDEMQIDG---CFPSPVTFNVLINGLCKKGD--------L 285
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L M G P+ + N++I G L + A+ + +M V +PN +Y
Sbjct: 286 SRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRM-VSSKCVPNVVTYGT 344
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+GL QGR + + M+ +G+ + Y++L+S L G+ +E + EM K
Sbjct: 345 IINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKG 404
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
++ I Y V+D +CR G+ +A+++L E+ NK + YT + L+
Sbjct: 405 YELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLM 451
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 121/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVS----FNTLMNGYIKLGDLDEGFRLKNXMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G +E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + G PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G+++E + M D TY +++ +C+ + +A +L E+ + L+ +G
Sbjct: 183 KLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLS-QSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G ++ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGSCKEG--------HLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G+VPS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + + A+ + + MK+ P I SY+IL AF + G +
Sbjct: 263 YNALIQGFCQKGRPDEALKLLEEMKDEG---ISPDIYSYSILVNAFCTEGD--------I 311
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E+ L ++M + +P + S++ G VND L FH++ Y + SY
Sbjct: 312 ESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSA-KGYKHDLISYST 370
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHG K+A L EM++ G VP Y SL+ G ++E +KN + M++
Sbjct: 371 LIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDG 430
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
D IT ++D+ C RG+ EA+ + +++++N++ + YTY+ +++ L
Sbjct: 431 LQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWL 480
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 11/191 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y TI+ +A ++ + +K + L C+P + +L F RGK M
Sbjct: 508 YTTIMDGYA--KQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGK--------M 557
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LFK+M +G+ D F+ ++I GY +V A ++ +M N PN +Y
Sbjct: 558 SKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKR-NNVTPNVKTYTC 616
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C R A L D+MKR P K+Y +L++ ++ + EM +K
Sbjct: 617 LVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKG 676
Query: 356 RPVDFITYRTV 366
D I Y T+
Sbjct: 677 TLPDHIAYLTL 687
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 14/257 (5%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLSRAV 193
A+ ++ + + KM + DV Q G E + N ++ AE KL
Sbjct: 115 ATVLSLLIKVFASNKMLADAKDVFMQAKKI----GVELNISSCNFLLKCLAEGDKLEAVR 170
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F +KNS P++ +Y I+ + K + ++ ME + ++M G P
Sbjct: 171 SLFDDLKNSGP---SPNVYTYTIMINFYC---KERHGQNIDMEQASLILEEMEEKGENPT 224
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + I G + DA + N N + Y+ LI G C +GR A +L
Sbjct: 225 VVTYGVYIHGLCRVGSIEDAWNKIQDLRSS-NQPLNIYCYNALIQGFCQKGRPDEALKLL 283
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+EMK +G P SY+ LV+A G++E + + EM + + +VL + +
Sbjct: 284 EEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTK 343
Query: 374 GRAGEAMKLLKELQNKN 390
G + + EL K
Sbjct: 344 GLVNDCLNFFHELSAKG 360
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 18/233 (7%)
Query: 164 LATPSFCGTEA-LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
L +P G A + + +I FA + L+ A VF ++ + +I S N L
Sbjct: 105 LDSPECVGRSATVLSLLIKVFASNKMLADAKDVFM---QAKKIGVELNISSCNFLLKCLA 161
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH-----VNDALRIF 277
K +E +R LF + N G P++++ MI Y H + A I
Sbjct: 162 EGDK--------LEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLIL 213
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+M P +Y IHGLC G ++A +++ + YN+L+
Sbjct: 214 EEMEEKGEN-PTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQ 272
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
G +E +K L EM ++ D +Y +++ C G M L++E+++ N
Sbjct: 273 KGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCN 325
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F Q G+E +I S N ++K + + +F + PN ++Y +I+
Sbjct: 137 VFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNS-GPSPNVYTYTIMINFY 195
Query: 301 CAQGRTKN-----ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
C + +N A + +EM+ KG P+ +Y + L G +E+ + ++
Sbjct: 196 CKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSN 255
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+P++ Y ++ C++GR EA+KLL+E++++ + D Y+Y+ L++
Sbjct: 256 QPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAF 305
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 96/236 (40%), Gaps = 15/236 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ II + + + + +A V M PS+ Y + + + KN M
Sbjct: 473 YSVIINWLCKYQAVEKAWEVLPVMFKDNIF---PSVIHYTTIMDGYAKQFKNP------M 523
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + L+++M G +PD +L ++ + ++ AL +F +M + F++
Sbjct: 524 KAWK-LYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAE-EGLSRDEFAFTA 581
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C G K A + +MKR P+ K+Y LV ++ + +M
Sbjct: 582 IIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNS 641
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKL---LDVLEDD 407
D TY ++ R A ++ E++ K L D Y L DV+ +D
Sbjct: 642 VTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTLGLGADVVTED 697
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 129/296 (43%), Gaps = 44/296 (14%)
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
RK G ++ + V + PS +YN +I + KL A +F M +
Sbjct: 331 RKKGNIGSAFDLVNKVKKFGVAPSL----FVYNALINSMCKDGKLDEAESLFNNMGHKGL 386
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINH-------------VY--------------MET 237
P+ +Y+IL +F RGK H VY +
Sbjct: 387 F---PNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRA 443
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ LF +M+ +G++P++ S+I GY +++A R++H+M PN++++ LI
Sbjct: 444 AKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM-TGKGISPNTYTFTALI 502
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GLC R A +L EM +P+ +YN L+ G + L EM+EK
Sbjct: 503 SGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNK----NLIDG-----YTYTKLLDVL 404
D TYR ++ +C GR EA + + +LQ + N I+G TYT L++ L
Sbjct: 563 PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGL 618
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 103/259 (39%), Gaps = 56/259 (21%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ +I A +++ A +F M + P+ +YN+L G
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVI---PNEVTYNVLIEGHCKEGN--------- 545
Query: 236 ETIRC--LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF-------HQMGVVYNY 286
T+R L +MV G+ PD ++ +I G + V++A ++ +
Sbjct: 546 -TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGC 604
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKR---------------------------- 318
LPN +Y LI+GLC G A LC EM
Sbjct: 605 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 664
Query: 319 ------KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+GF+ ++ +YN L+ G ++E + L MI+ D I+Y T++ E CR
Sbjct: 665 LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCR 724
Query: 373 RGRAGEAMKLLKELQNKNL 391
RG EA+KL + + N+ +
Sbjct: 725 RGDLKEAIKLWESMLNRGV 743
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YNIL F G+ V + M++ GI PD S +++I Y + +
Sbjct: 679 TYNILIRGFCKLGRIQEAAEVLV--------NMIDSGISPDCISYSTIIYEYCRRGDLKE 730
Query: 273 ALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
A++++ M GV P++ +Y++LI+G C G A EL D+M R+G P+ +YN
Sbjct: 731 AIKLWESMLNRGVN----PDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYN 786
Query: 330 SLVSALALNGEVEET 344
SL+ L V T
Sbjct: 787 SLIHGTCLMSSVSST 801
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 139/374 (37%), Gaps = 65/374 (17%)
Query: 75 GKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFR 134
G R K + A D P F L N M LFN + F
Sbjct: 329 GLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFP 388
Query: 135 HDASTYHIMTRKLGA-AKMYQEMDDVVNQMLATPSFCGTEAL---YNTIIYFFAEARKLS 190
+D TY I+ K+ DV L + G +A Y+++I + KL
Sbjct: 389 NDV-TYSILIDSFCKRGKL-----DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLR 442
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A +F M + +P++ Y L + + G+ + L+ +M GI
Sbjct: 443 AAKSLFDEMIAN---GLKPNVVIYTSLISGYCKEGE--------LHNAFRLYHEMTGKGI 491
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P+ ++ ++I G +N + +A ++F +M V +N +PN +Y+ LI G C +G T A
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEM-VEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550
Query: 311 ELCDEMKRKGFVPSS-------------------------------------------KS 327
EL DEM KG VP + +
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVT 610
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L++ L G +++ EM+ + TY LD + G +A++L L
Sbjct: 611 YTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL 670
Query: 388 NKNLIDGYTYTKLL 401
L + TY L+
Sbjct: 671 EGFLANTVTYNILI 684
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 123/288 (42%), Gaps = 20/288 (6%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL 175
D LV + L P+ R + + + R D++V+ L + +
Sbjct: 163 DGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVY-----V 217
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++ E + RA V M++S C S+ +YN+ N
Sbjct: 218 YTAVVRSLCELKDFIRAREVIGRMESS---GCDLSVATYNVFIRGLCK-------NQRVW 267
Query: 236 ETIRCLFKQMVN-DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
E + K +++ G+ D+ + +++ G + ++M + + ++P+ +
Sbjct: 268 EAVE--IKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM-IEFGFVPSEAAVS 324
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GL +G +A +L +++K+ G PS YN+L++++ +G+++E M K
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ +TY ++D C+RG+ A+ L ++ + Y Y+ L+
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLI 432
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 107/255 (41%), Gaps = 15/255 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-TEALYNTIIYFFAEARKLSR 191
R D Y + R L K + +V+ +M S C + A YN I + +++
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREVIGRM--ESSGCDLSVATYNVFIRGLCKNQRVWE 268
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
AV + K + + + L R + +Y L + E + +M+ G
Sbjct: 269 AVEI-KNLLSYKGL--RADVGTYCTLVLGLCKVEE--------FEAGEEMMNEMIEFGFV 317
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P ++++++ G ++ A + +++ + P+ F Y+ LI+ +C G+ A
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK-FGVAPSLFVYNALINSMCKDGKLDEAES 376
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L + M KG P+ +Y+ L+ + G+++ + L +M E Y +++ C
Sbjct: 377 LFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHC 436
Query: 372 RRGRAGEAMKLLKEL 386
+ G+ A L E+
Sbjct: 437 KLGKLRAAKSLFDEM 451
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P++ +Y L G M+ L ++M+ P+ + +
Sbjct: 604 CLPNVVTYTALINGLCKIG--------LMDKAELLCREMLASNSLPNQNTYACFLDYLTS 655
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++ A+++ H + ++ +L N+ +Y+ LI G C GR + A E+ M G P
Sbjct: 656 EGNIEKAIQL-HDV-LLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 713
Query: 327 SYNSLVSALALNGEVEETVKNLWE-MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
SY++++ G+++E +K LWE M+ + D + Y ++ C G +A +L +
Sbjct: 714 SYSTIIYEYCRRGDLKEAIK-LWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDD 772
Query: 386 LQNKNL 391
+ + +
Sbjct: 773 MMRRGV 778
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 130/334 (38%), Gaps = 52/334 (15%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEM--------------DDVV 160
+D + L FN+ F H +++ I+ L + +Y + +
Sbjct: 71 DDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLF 130
Query: 161 NQMLATPSFC--GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI-- 216
L + C T ++ +I + + R+ + V + M + L P IR+ +
Sbjct: 131 ESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGIL---PQIRTLSGVL 187
Query: 217 --------------LFTAFLSRGKNTYINHVYMETIRCL------------FKQMVNDGI 250
LF +S G + +VY +R L +M + G
Sbjct: 188 NGLIRIRQFRMALHLFDEIVSSGLRPDV-YVYTAVVRSLCELKDFIRAREVIGRMESSGC 246
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLCAQGRTKNA 309
+ + + N I+G + V +A+ I + + Y L + +Y L+ GLC +
Sbjct: 247 DLSVATYNVFIRGLCKNQRVWEAVEIKNLLS--YKGLRADVGTYCTLVLGLCKVEEFEAG 304
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
E+ +EM GFVPS + ++LV L G + + ++ + Y +++
Sbjct: 305 EEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364
Query: 370 ICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+C+ G+ EA L + +K L + TY+ L+D
Sbjct: 365 MCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+G + + N +I+G+ + +A + M + P+ SY +I+ C +G K
Sbjct: 671 EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNM-IDSGISPDCISYSTIIYEYCRRGDLK 729
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A +L + M +G P + +YN L+ + GE+ + + +M+ + + TY +++
Sbjct: 730 EAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 789
Query: 368 DEIC 371
C
Sbjct: 790 HGTC 793
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + + S A + + M + P++ +YN L AF+ GK +
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERK---ISPNVVTYNALINAFVKEGK-------FF 340
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+ +M+ GI P+ + NSMI G+ + ++ A +F+ M P+ F++
Sbjct: 341 EAAE-LYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT-KGCSPDVFTFTT 398
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C R + EL EM R+G V ++ +YN+L+ L G++ + +MI
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D +T T+LD +C G+ +A+++ K +Q +
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 118/244 (48%), Gaps = 18/244 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSR-NLEC-------RP 209
D+ QM+++ C NT++ + KL A+ +FK M+ S+ +L+ P
Sbjct: 449 DLSQQMISS-GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 507
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+ +YNIL ++ GK ++E L+++M + GI PD + +SMI G +
Sbjct: 508 DVLTYNILICGLINEGK-------FLEAEE-LYEEMPHRGIVPDTITYSSMIDGLCKQSR 559
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+++A ++F MG ++ PN +++ LI+G C GR + EL EM R+G V + Y
Sbjct: 560 LDEATQMFVSMGS-KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYI 618
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+L+ G + + EMI D IT R +L + A+ +L++LQ
Sbjct: 619 TLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRY 678
Query: 390 NLID 393
L D
Sbjct: 679 QLED 682
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 25/243 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+++ ++S A+ +F + CRP + ++ L G+ +
Sbjct: 154 FTTLLHGLCLDHRVSEALDLFHQI-------CRPDVLTFTTLMNGLCREGR-------VV 199
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +MV +G++PD + + + G AL + +M + + PN Y
Sbjct: 200 EAV-ALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSA 258
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC GR ++ L EM+ KG P+ +YN ++ ++G + L EM+E++
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK----------NLIDGYTYTKLLDVLE 405
+ +TY +++ + G+ EA +L E+ + ++IDG+ LD E
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378
Query: 406 DDF 408
D F
Sbjct: 379 DMF 381
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 38/236 (16%)
Query: 185 EARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET----IRC 240
E + L A+ +F M SR L PS+ +N L A + + + +Y + IRC
Sbjct: 58 EIKGLEDAIDLFSDMLRSRPL---PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114
Query: 241 -----------------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
F ++ G+ PD+ + +++ G L + V++AL +F
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
HQ+ P+ ++ L++GLC +GR A L D M G P +Y + V +
Sbjct: 175 HQI-----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229
Query: 338 NGEVEETVKNLWEM--IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
G+ + L +M I +P + + Y ++D +C+ GR ++ L E+Q+K +
Sbjct: 230 MGDTVSALNLLRKMEEISHIKP-NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGI 284
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL----------PNS 290
L +QM++ G+ PDI + N+++ G + + DAL +F M L P+
Sbjct: 450 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDV 509
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y+ LI GL +G+ A EL +EM +G VP + +Y+S++ L ++E +
Sbjct: 510 LTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 569
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
M K + +T+ T+++ C+ GR + ++L E+ + ++ D Y L+
Sbjct: 570 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 621
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ Y+ + G+++ +++++E M + GI P+I + N MI G+ +S
Sbjct: 250 KPNVVIYSAIIDGLCKDGRHSDSHNLFIE--------MQDKGIFPNIVTYNCMIGGFCIS 301
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ A R+ +M + PN +Y+ LI+ +G+ A EL DEM +G +P++ +
Sbjct: 302 GRWSAAQRLLQEM-LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 360
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YNS++ ++ + M K D T+ T++D C R + M+LL E+
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420
Query: 388 NKNLI-DGYTYTKLL 401
+ L+ + TY L+
Sbjct: 421 RRGLVANTVTYNTLI 435
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 116/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + +L A+ +M + C+P++ ++NI+ + S G+ +M
Sbjct: 285 YNVLINGICKEGRLDEAIRFLNHMPS---YGCQPNVITHNIILRSMCSTGR-------WM 334
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + +M+ G P + + N +I + A+ + +M + PNS SY+
Sbjct: 335 DAEK-FLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKM-PQHGCTPNSLSYNP 392
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+H LC + + A E D M +G P +YN+L++AL +G+V+ V+ L ++ K
Sbjct: 393 LLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG 452
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
ITY TV+D + + G+ +A+KLL E++ K L D TY+ L+ L
Sbjct: 453 CSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGL 502
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 29/275 (10%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
T++I+ R + + + + + + +M+ +PS +N +I F + RA+ V
Sbjct: 319 THNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSV----VTFNILINFLCRKGLIGRAIDV 374
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M C P+ SYN L A K ME MV+ G PDI
Sbjct: 375 LEKMPQH---GCTPNSLSYNPLLHALCKDKK--------MERAIEYLDIMVSRGCYPDIV 423
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N+++ V+ A+ I +Q+G P +Y+ +I GL G+T +A +L DE
Sbjct: 424 TYNTLLTALCKDGKVDVAVEILNQLGS-KGCSPVLITYNTVIDGLSKVGKTDDAIKLLDE 482
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
MK KG P +Y++LV L+ G+V+E + ++ E + ITY +++ +C+ +
Sbjct: 483 MKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQ 542
Query: 376 AGEAMKLLKELQNKN----------LIDGYTYTKL 400
A+ L + + LI+G Y L
Sbjct: 543 TVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGL 577
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 187 RKLSRAVYVFKYMKNSRNLECR---PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK 243
R+L R + + K ++ CR P I + L GK V ME +
Sbjct: 118 RRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRV-MEILE---- 172
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
+ G PD+ + N +I GY + + AL++ +M V P+ +Y+ ++ LC
Sbjct: 173 ---DSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVS----PDVVTYNTILRTLCDS 225
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G+ K A E+ D ++ P +Y L+ A V + +K L EM +K D +TY
Sbjct: 226 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 285
Query: 364 RTVLDEICRRGRAGEAMKLLKEL 386
+++ IC+ GR EA++ L +
Sbjct: 286 NVLINGICKEGRLDEAIRFLNHM 308
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 42/245 (17%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
T++I+ L + DV+ +M C +L YN +++ + +K+ RA+ +
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKM--PQHGCTPNSLSYNPLLHALCKDKKMERAI---E 408
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTYINHVY 234
Y+ + C P I +YN L TA GK NT I+ +
Sbjct: 409 YLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLS 468
Query: 235 M-----ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH---QMGVVYNY 286
+ I+ L +M G++PDI + ++++ G V++A+ FH +MGV
Sbjct: 469 KVGKTDDAIK-LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVK--- 524
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
PN+ +Y+ ++ GLC +T A + M +G P+ SY L+ LA G +E ++
Sbjct: 525 -PNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALE 583
Query: 347 NLWEM 351
L E+
Sbjct: 584 LLNEL 588
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 16/233 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + + ++ A+ + M S P + +YN + GK
Sbjct: 183 YNVLISGYCKTGEIGSALQLLDRMSVS------PDVVTYNTILRTLCDSGK-------LK 229
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +QM + PD+ + +I+ + V A+++ +M P+ +Y+
Sbjct: 230 EAMEVLDRQMQRE-CYPDVITYTILIEATCKESGVGQAMKLLDEM-RDKGCKPDVVTYNV 287
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G+C +GR A + M G P+ ++N ++ ++ G + K L EMI K
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVLEDD 407
+T+ +++ +CR+G G A+ +L+++ Q+ + +Y LL L D
Sbjct: 348 CSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKD 400
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 15/213 (7%)
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
++I + K +A V + +++S + P + +YN+L + + G+
Sbjct: 150 SLIRGLCKTGKTWKATRVMEILEDSGAV---PDVITYNVLISGYCKTGE----------- 195
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
I + + + PD+ + N++++ S + +A+ + + Y P+ +Y LI
Sbjct: 196 IGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECY-PDVITYTILI 254
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
C + A +L DEM+ KG P +YN L++ + G ++E ++ L M
Sbjct: 255 EATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQ 314
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+ IT+ +L +C GR +A K L E+ K
Sbjct: 315 PNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV- 358
L G + + ++M +G +P + SL+ L G+ + + + E++E V
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATR-VMEILEDSGAVP 178
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLED 406
D ITY ++ C+ G G A++LL + D TY +L L D
Sbjct: 179 DVITYNVLISGYCKTGEIGSALQLLDRMSVSP--DVVTYNTILRTLCD 224
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 48/287 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
DA +Y+ + + L QE D+V +M C + + +NT+I+ F + ++S+A
Sbjct: 194 DAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 253
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+F M + P + +YN + A L + + M+ + +QMV+ G+EPD
Sbjct: 254 LFNEMVQKGVV---PDVGTYNSIVDA-LCKARA-------MDKAEFVLRQMVDKGVEPDG 302
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N++I GY S H ++ ++F +M +P++ ++ + LC GR+K+A E+
Sbjct: 303 VTYNAIIHGYSCSGHWKESAKMFRKM-TSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQ 361
Query: 315 EMKRKGFVPSSKSY-----------------------------------NSLVSALALNG 339
M KG +P SY N L+SA A G
Sbjct: 362 YMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRG 421
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++E + EM + + +TY T++ CR GR +AM+ ++
Sbjct: 422 MMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQM 468
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 130/284 (45%), Gaps = 14/284 (4%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
E+F + + + D +Y I+ + +M+++ + M A N +I
Sbjct: 358 EIFQYMTTKGHMP-DIVSYSILLHGYATEGRFADMNNLFHSM-ADKGIVSNCHCINILIS 415
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
A+ + A+ VF M+ RP++ +Y+ L +AF G+ ME
Sbjct: 416 AHAKRGMMDEAMLVFTEMQGQ---GVRPNVVTYSTLISAFCRMGRLAD----AMEK---- 464
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F QM++ GIEP+ +S+I G+ + + A +M + PN + +IH LC
Sbjct: 465 FSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLC 524
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+GR +A+++ + + G P+ ++NSL+ L G++E+ L M+ D +
Sbjct: 525 IEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVV 584
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
T T++ C+ G+ + + L +E+ +K + TY +LD L
Sbjct: 585 TNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGL 628
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 12/244 (4%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
AK E DV+ ++ S C +A+ YNT+I + A+ + + M C
Sbjct: 172 AKRTDEAVDVLLHRMSELS-CVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGG-RCS 229
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + S+N + F +G+ + + LF +MV G+ PD+ + NS++ +
Sbjct: 230 PDVVSFNTVIHGFFKQGEVSKACN--------LFNEMVQKGVVPDVGTYNSIVDALCKAR 281
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ A + QM V P+ +Y+ +IHG G K + ++ +M KG +P + ++
Sbjct: 282 AMDKAEFVLRQM-VDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTF 340
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+S +S+L +G ++ + M K D ++Y +L GR + L + +
Sbjct: 341 SSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMAD 400
Query: 389 KNLI 392
K ++
Sbjct: 401 KGIV 404
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 11/213 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A+Y+++I+ F L +A M S+ L RP+I ++ + + G+ V
Sbjct: 478 AVYHSLIHGFCMHGDLVKAKEFISEMM-SKGLH-RPNIVFFSSIIHSLCIEGRVMDAQDV 535
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
F +++ G P I + NS+I GY L + A + M V P+ +
Sbjct: 536 --------FNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAM-VSVGIEPDVVTN 586
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L+ G C G+ + L EM K P++ +YN ++ L G K EMI+
Sbjct: 587 NTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMID 646
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
VD TY+ +L +CR EA+ L +L
Sbjct: 647 SGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 679
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 2/171 (1%)
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
E + L +M PD S N++IK + +AL + +M P+ S++
Sbjct: 177 EAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFN 236
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+IHG QG A L +EM +KG VP +YNS+V AL +++ L +M++K
Sbjct: 237 TVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDK 296
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
D +TY ++ G E+ K+ +++ +K LI D T++ + L
Sbjct: 297 GVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSL 347
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 95/196 (48%), Gaps = 13/196 (6%)
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
++R+Y IL R + + ++ +++ G++ + +K +
Sbjct: 123 TVRTYGILMDC-CCRARRPDLGPAFVA-------RLLRAGLKTGTIQATTFLKCLCHAKR 174
Query: 270 VNDALRIF-HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG--FVPSSK 326
++A+ + H+M + + +P++ SY+ +I LC R++ A ++ M ++G P
Sbjct: 175 TDEAVDVLLHRMSEL-SCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVV 233
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
S+N+++ GEV + EM++K D TY +++D +C+ +A +L+++
Sbjct: 234 SFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQM 293
Query: 387 QNKNL-IDGYTYTKLL 401
+K + DG TY ++
Sbjct: 294 VDKGVEPDGVTYNAII 309
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
NT++ + ++ K+ + +F+ M + + +P+ +YNI+ L G+ +
Sbjct: 587 NTLVSGYCKSGKIDDGLILFREMLHKK---VKPTTVTYNIVLDGLLRAGRTS-------- 635
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ +F +M++ G DI + ++KG ++ ++A+ +FH++G + + + +
Sbjct: 636 AAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI-LNTM 694
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
I+ L R + A +L + G VP+ +Y ++ L G VEE ++ +EK
Sbjct: 695 INALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEA-DTMFSSMEK 751
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + + S A + + M + P++ +YN L AF+ GK +
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERK---ISPNVVTYNALINAFVKEGK-------FF 340
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+ +M+ GI P+ + NSMI G+ + ++ A +F+ M P+ F++
Sbjct: 341 EAAE-LYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT-KGCSPDVFTFTT 398
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C R + EL EM R+G V ++ +YN+L+ L G++ + +MI
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D +T T+LD +C G+ +A+++ K +Q +
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 25/243 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+++ ++S A+ +F + CRP + ++ L G+ +
Sbjct: 154 FTTLLHGLCLDHRVSEALDLFHQI-------CRPDVLTFTTLMNGLCREGR-------VV 199
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +MV +G++PD + + + G AL + +M + + PN Y
Sbjct: 200 EAV-ALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSA 258
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC GR ++ L EM+ KG P+ +YN ++ ++G + L EM+E++
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK----------NLIDGYTYTKLLDVLE 405
+ +TY +++ + G+ EA +L E+ + ++IDG+ LD E
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378
Query: 406 DDF 408
D F
Sbjct: 379 DMF 381
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 18/238 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSR-NLEC-------RP 209
D+ QM+++ C NT++ + KL A+ +FK M+ S+ +L+ P
Sbjct: 449 DLSQQMISS-GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 507
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+ +YNIL ++ GK ++E L+++M + GI PD + +SMI G +
Sbjct: 508 DVLTYNILICGLINEGK-------FLEAEE-LYEEMPHRGIVPDTITYSSMIDGLCKQSR 559
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+++A ++F MG ++ PN +++ LI+G C GR + EL EM R+G V + Y
Sbjct: 560 LDEATQMFVSMGS-KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYI 618
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+L+ G + + EMI D IT R +L + A+ +L++LQ
Sbjct: 619 TLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 38/236 (16%)
Query: 185 EARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET----IRC 240
E + L A+ +F M SR L PS+ +N L A + + + +Y + IRC
Sbjct: 58 EIKGLEDAIDLFSDMLRSRPL---PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114
Query: 241 -----------------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
F ++ G+ PD+ + +++ G L + V++AL +F
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
HQ+ P+ ++ L++GLC +GR A L D M G P +Y + V +
Sbjct: 175 HQI-----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229
Query: 338 NGEVEETVKNLWEM--IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
G+ + L +M I +P + + Y ++D +C+ GR ++ L E+Q+K +
Sbjct: 230 MGDTVSALNLLRKMEEISHIKP-NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGI 284
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ Y+ + G+++ +++++E M + GI P+I + N MI G+ +S
Sbjct: 250 KPNVVIYSAIIDGLCKDGRHSDSHNLFIE--------MQDKGIFPNIVTYNCMIGGFCIS 301
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ A R+ +M + PN +Y+ LI+ +G+ A EL DEM +G +P++ +
Sbjct: 302 GRWSAAQRLLQEM-LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 360
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YNS++ ++ + M K D T+ T++D C R + M+LL E+
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420
Query: 388 NKNLI-DGYTYTKLL 401
+ L+ + TY L+
Sbjct: 421 RRGLVANTVTYNTLI 435
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL----------PNS 290
L +QM++ G+ PDI + N+++ G + + DAL +F M L P+
Sbjct: 450 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDV 509
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y+ LI GL +G+ A EL +EM +G VP + +Y+S++ L ++E +
Sbjct: 510 LTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 569
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
M K + +T+ T+++ C+ GR + ++L E+ + ++ D Y L+
Sbjct: 570 MGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 621
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 21/221 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I+ F L+ A+ + + M +S P I + N L GK +
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVC---PDIVTCNTLLDGLCDNGKL----KDAL 483
Query: 236 ETIRCLFKQMVN-------DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYN 285
E + + K ++ +G+EPD+ + N +I G I +A ++ +M G+V
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV-- 541
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P++ +Y +I GLC Q R A ++ M K F P+ ++N+L++ G V++ +
Sbjct: 542 --PDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 599
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ EM + D I Y T++ + G A+ + +E+
Sbjct: 600 ELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 640
>gi|225450452|ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62590-like [Vitis vinifera]
Length = 730
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 147/325 (45%), Gaps = 19/325 (5%)
Query: 69 SSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFN-------NEELCNVMTLQEDPLVCL 121
+S + ++ + P +D T+ +E P+F ++L V+ D +
Sbjct: 22 ASMSSISCANRIQAVPEIDQTKTPPNDNEFEPKFQFLRNRLMPDDLIRVLDTTHDLNSAI 81
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
++F WAS+Q RFRH A TY + KLG ++M+ ++M+ G E L +I
Sbjct: 82 KVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAFCSEMVREKCPGGEETLI-ALIS 140
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
F + R+LS A+ V M ++ + SI +N L A + ++ I +
Sbjct: 141 SFVKHRRLSEAIRVLVIMTSNGY---KFSIIEFNGLLGALVRERRD-------FREILLV 190
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+K++V GI P++ +LN +I+ N ++ AL + +M PNS ++D LI GL
Sbjct: 191 YKEIVKAGIVPNVDTLNYLIEALFELNWIDLALDQYRRMS-KKGCSPNSKTFDILISGLI 249
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
A+ + + + EM Y S++ +VEE + W M + D +
Sbjct: 250 ARNLVEKSVVVLGEMIELECEADLSFYTSVIPLFCSVHQVEEGMMLFWRMRASKLVPDLL 309
Query: 362 TYRTVLDEICRRGRAGEAMKLLKEL 386
YR ++ + +A+ LL+E+
Sbjct: 310 IYRVLIQCLSESLWLDDAINLLEEM 334
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 119/271 (43%), Gaps = 21/271 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE-ALYNTIIYFFAEARKLSRAVY 194
++ T+ I+ L A + ++ V+ +M+ C + + Y ++I F ++ +
Sbjct: 237 NSKTFDILISGLIARNLVEKSVVVLGEMIELE--CEADLSFYTSVIPLFCSVHQVEEGMM 294
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+F M+ S+ + P + Y +L ++++ L ++M+ G+ P+
Sbjct: 295 LFWRMRASKLV---PDLLIYRVLIQCL--------SESLWLDDAINLLEEMIGCGLTPED 343
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
++KG+ N+A F + V+ P ++ L+ G C G A+ +
Sbjct: 344 DVFVYIVKGFCKLGKFNEA-EFFLKDKCVFGTDP----HNALLEGYCTAGDFHGAKVFLE 398
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
++ + + + S+N LV L N + + L MI D TY ++ C+
Sbjct: 399 KIFDRNII-DNFSWNILVRWLCENAWTSKAFELLSRMIVSSFTPDSATYSALVIGNCKLS 457
Query: 375 RAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
+ + ++L ++ +KN ++D +Y +L++ L
Sbjct: 458 KCKDGLELFHQVCSKNWVLDSASYAELVETL 488
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 113/271 (41%), Gaps = 16/271 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDV-VNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
F D++TY + +G K+ + D + + + + ++ A Y ++ + ++
Sbjct: 439 FTPDSATYSALV--IGNCKLSKCKDGLELFHQVCSKNWVLDSASYAELVETLCQMERIQE 496
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A VF YM ++ C S ++L GK E IR L G
Sbjct: 497 AAEVFCYMSSNG---CALKSSSLDMLMKGICVTGKVD-------EAIR-LLVLACYSGTS 545
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
S +++ G +D L + +M +V + + +Y L+ +CA RT++
Sbjct: 546 CTNASYKAIMLGLSKLGKDSDILVVLSKM-LVEGCILDVEAYCILVQSMCALSRTEDIAR 604
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ M +G VP S++ +L+S L + ++ + + ++ ++ Y ++ +
Sbjct: 605 FFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLASDGEILNSSMYNLLIIGLL 664
Query: 372 RRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ G EA +LL + K + D T+ L+
Sbjct: 665 KEGYKSEACRLLDLMLEKGWVPDASTHGLLI 695
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 12/165 (7%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T A Y I+ ++ K S + V M C + +Y IL + + +
Sbjct: 547 TNASYKAIMLGLSKLGKDSDILVVLSKMLVEG---CILDVEAYCILVQSMCALSRT---- 599
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
E I F MV++G+ PD ++ +++ + ++ L ++ L NS
Sbjct: 600 ----EDIARFFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLASDGEIL-NSS 654
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
Y+ LI GL +G A L D M KG+VP + ++ L+ ++
Sbjct: 655 MYNLLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIGSVV 699
>gi|147780248|emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
Length = 730
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 141/310 (45%), Gaps = 19/310 (6%)
Query: 84 PALDDTQFRCAVSELPPRFN-------NEELCNVMTLQEDPLVCLELFNWASKQPRFRHD 136
P +D T+ +E P+F ++L V+ D +++F WAS+Q RFRH
Sbjct: 37 PEIDQTKTPPNDNEFEPKFQFLRNRLMPDDLIRVLDTTHDLNSAIKVFKWASRQKRFRHT 96
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
A TY + KLG ++M+ ++M+ G E L +I F + R+LS A+ V
Sbjct: 97 ADTYFRVILKLGMGGKIEDMEAFCSEMVREKCPGGEETLI-ALISSFVKHRRLSEAIRVL 155
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M ++ + SI +N L A + ++ I ++K++V GI P++ +
Sbjct: 156 VIMTSNGY---KFSIIEFNGLLGALVRERRD-------FREILLVYKEIVKAGIVPNVDT 205
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
LN +I+ N ++ AL + +M PNS ++D LI GL A+ + + + EM
Sbjct: 206 LNYLIEALFELNWIDLALDQYRRMS-KKGCSPNSKTFDILISGLIARNLVEKSVVVLGEM 264
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
Y S++ +VEE + W M + D + YR ++ +
Sbjct: 265 IELECEADLSFYTSVIPLFCSVHQVEEGMMLFWRMRASKLVPDLLIYRVLIQCLSESLWL 324
Query: 377 GEAMKLLKEL 386
+A+ LL+E+
Sbjct: 325 DDAINLLEEM 334
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 118/276 (42%), Gaps = 23/276 (8%)
Query: 108 CNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATP 167
C+V ++E + LF W + + D Y ++ + L + + +++ +M+
Sbjct: 284 CSVHQVEEGMM----LF-WRMRASKLVPDLLIYRVLIQCLSESLWLDDAINLLEEMIG-- 336
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
CG + +Y KL + ++K+ +C +N L + + G +
Sbjct: 337 --CGLTPEDDVFVYIVKGFCKLGKFNEAEFFLKD----KCVFGTDPHNALLEGYCTAG-D 389
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
+ V++E I F + + D FS N +++ + + A + +M +V ++
Sbjct: 390 FHGAKVFLEKI---FDRNIIDN-----FSWNILVRWLCENAWTSKAFELLSRM-IVSSFT 440
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+S +Y L+ G C + K+ EL ++ K +V S SY LV L ++E +
Sbjct: 441 PDSATYSALVIGNCKLSKCKDGLELFHQVCSKNWVLDSASYAELVETLCQMERIQEAAEV 500
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
M + + + ++ IC G+ EA++LL
Sbjct: 501 FCYMSSNRCALKSSSLDMLMKGICVTGKVDEAIRLL 536
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 119/271 (43%), Gaps = 21/271 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE-ALYNTIIYFFAEARKLSRAVY 194
++ T+ I+ L A + ++ V+ +M+ C + + Y ++I F ++ +
Sbjct: 237 NSKTFDILISGLIARNLVEKSVVVLGEMIELE--CEADLSFYTSVIPLFCSVHQVEEGMM 294
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+F M+ S+ + P + Y +L ++++ L ++M+ G+ P+
Sbjct: 295 LFWRMRASKLV---PDLLIYRVLIQCL--------SESLWLDDAINLLEEMIGCGLTPED 343
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
++KG+ N+A F + V+ P ++ L+ G C G A+ +
Sbjct: 344 DVFVYIVKGFCKLGKFNEA-EFFLKDKCVFGTDP----HNALLEGYCTAGDFHGAKVFLE 398
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
++ + + + S+N LV L N + + L MI D TY ++ C+
Sbjct: 399 KIFDRNII-DNFSWNILVRWLCENAWTSKAFELLSRMIVSSFTPDSATYSALVIGNCKLS 457
Query: 375 RAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
+ + ++L ++ +KN ++D +Y +L++ L
Sbjct: 458 KCKDGLELFHQVCSKNWVLDSASYAELVETL 488
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 115/271 (42%), Gaps = 16/271 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDV-VNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
F D++TY + +G K+ + D + + + + ++ A Y ++ + ++
Sbjct: 439 FTPDSATYSALV--IGNCKLSKCKDGLELFHQVCSKNWVLDSASYAELVETLCQMERIQE 496
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A VF YM ++R C S ++L GK E IR L + G
Sbjct: 497 AAEVFCYMSSNR---CALKSSSLDMLMKGICVTGKVD-------EAIRLLVLACYS-GTS 545
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
S +++ G +D L + +M +V + + +Y L+ +CA RT++
Sbjct: 546 CTNASYKAIMLGLSKLGKDSDILVVLSKM-LVEGCILDVEAYCILVQSMCALSRTEDIAR 604
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ M +G VP S++ +L+S L + ++ + + ++ ++ Y ++ +
Sbjct: 605 FFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLASDGEILNSSMYNLLIIGLL 664
Query: 372 RRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ G EA +LL + K + D T+ L+
Sbjct: 665 KEGYKSEACRLLDLMLEKGWVPDASTHGLLI 695
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 105 EELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML 164
E LC + +QE E+F + S R +S+ ++ + + ++D+ + ++L
Sbjct: 486 ETLCQMERIQEAA----EVFCYMSSN-RCALKSSSLDMLMKGICVTG---KVDEAI-RLL 536
Query: 165 ATPSFCGTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+ GT A Y I+ ++ K S + V M C + +Y IL +
Sbjct: 537 VLACYSGTSCTNASYKAIMLGLSKLGKDSDILVVLSKMLVEG---CILDVEAYCILVQSM 593
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
+ + E I F MV++G+ PD ++ +++ + ++ L ++
Sbjct: 594 CALSRT--------EDIARFFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLA 645
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
L NS Y+ LI GL +G A L D M KG+VP + ++ L+ ++
Sbjct: 646 SDGEIL-NSSMYNLLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIGSVV 699
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 17/271 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
DA TY I+ A E+ + LA C A+ YN II F +L+ A
Sbjct: 230 DAFTYGILVNAHCRAGQMHEVASFME--LARHDGCALSAVNYNFIIQGFIRCGRLAEATQ 287
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+F+ ++ E P + +YN+L L + K +E LF++ G+ D+
Sbjct: 288 LFE---STMTKESVPDVFTYNLLIA--LCKSKQ-------LEEALTLFQEAEQGGVVLDV 335
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
F+ + ++ + + AL +F+ M +P++ Y+ LI L QG+ A EL +
Sbjct: 336 FTYSYLMDAFGKAGRAAKALEVFYNMQKA-GCMPDTVVYNVLISCLGKQGKVDEALELLE 394
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M RKG +P ++YN ++ L+ G E+ M ++ D +TY T+L+ + +
Sbjct: 395 DMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLR 454
Query: 375 RAGEAMKLLKELQ-NKNLIDGYTYTKLLDVL 404
R EA L E+Q NK + D T+ L+D L
Sbjct: 455 RTDEACDLFDEMQANKCMPDLTTFGTLIDTL 485
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 12/188 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + R+ A +F M+ ++ C P + ++ L G+ M
Sbjct: 443 YNTLLNGLKKLRRTDEACDLFDEMQANK---CMPDLTTFGTLIDTLAKAGR--------M 491
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E ++V G P+ + N++I G+ S V+ +F M + + P+S +Y
Sbjct: 492 EDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDM-IECSCFPDSITYTI 550
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G +G T A EL EM R+G P+ +YN L+ +L++ G+VE+ EMI K
Sbjct: 551 LVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKG 610
Query: 356 RPVDFITY 363
D TY
Sbjct: 611 FNPDMQTY 618
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 18/280 (6%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
LC L+E L LF A +Q D TY + G A + +V M
Sbjct: 310 LCKSKQLEE----ALTLFQEA-EQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKA 364
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
T +YN +I + K+ A+ + + M N + + P R+YNI+ S G+
Sbjct: 365 GCMPDT-VVYNVLISCLGKQGKVDEALELLEDM-NRKGI--MPDCRTYNIVIDVLSSCGR 420
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
E F M PD+ + N+++ G ++A +F +M
Sbjct: 421 --------YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQA-NKC 471
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+P+ ++ LI L GR ++A E + + G P+S YN+L+S +G+V++ +
Sbjct: 472 MPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYE 531
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+MIE D ITY ++ RRG AM+LL+E+
Sbjct: 532 LFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEM 571
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 13/226 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + + +A F MK ++ P + +YN L L + + T
Sbjct: 408 YNIVIDVLSSCGRYEKAYSFFGMMKRRKH---SPDVVTYNTLLNG-LKKLRRT------- 456
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF +M + PD+ + ++I + + DAL ++ V + PNS+ Y+
Sbjct: 457 DEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARL-VKMGHAPNSYIYNA 515
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C G+ EL +M P S +Y LV + G ++ L EM+ +
Sbjct: 516 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 575
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKL 400
TY ++ + G+ +A L KE+ K D TY+ L
Sbjct: 576 HTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 115/275 (41%), Gaps = 38/275 (13%)
Query: 169 FCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
FC + + + +++ E R++ +A+ +F M+ + +C P + +YN L + G
Sbjct: 84 FCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRET--CDCAPDVVAYNTLIAGYCKAGDG 141
Query: 228 TYI---------------NHVYMETI-------------RCLFKQMVNDGIEPDIFSLNS 259
N V +T+ +F++M+ G++ D+ N+
Sbjct: 142 DRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNT 201
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
+I + A R+ H M + ++F+Y L++ C G+ + +
Sbjct: 202 LIHCTCRLGMLRQARRLLHHM-TAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHD 260
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G S+ +YN ++ G + E + + K+ D TY +L +C+ + EA
Sbjct: 261 GCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTY-NLLIALCKSKQLEEA 319
Query: 380 MKLLKELQNKNLI-DGYTYTKLLDVLEDDFGNSIR 413
+ L +E + ++ D +TY+ L+D FG + R
Sbjct: 320 LTLFQEAEQGGVVLDVFTYSYLMDA----FGKAGR 350
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 125/292 (42%), Gaps = 46/292 (15%)
Query: 134 RHDASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA 186
+ D TY + L A +++EM+ T + YN+++ +A
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEME--------TKGIKSSVVTYNSLVRGLCKA 276
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR------- 239
K + + K M + E P++ ++N+L F+ GK N +Y E I
Sbjct: 277 GKWNDGALLLKDMVSR---EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 240 ----------CL----------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
C+ MV + PDI + S+IKGY + V+D +++F
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
+ + N+ +Y L+ G C G+ K A EL EM G +P +Y L+ L NG
Sbjct: 394 ISK-RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
++E+ ++ ++ + + + + Y T+++ +C+ G+ +A L L K +
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ +F+ M SR L PS+ ++ F+A ++R K + KQ+ +GI
Sbjct: 72 AIALFQEMIRSRPL---PSLVDFSRFFSA-IARTKQ-------FNLVLDFCKQLELNGIA 120
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+I++LN MI + A + ++ + Y P++ +++ LI GL +G+ A
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKV-MKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L D M G P +YNS+V+ + +G+ + L +M E+ D TY T++D +C
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 372 RRGRAGEAMKLLKELQNKNL 391
R G A+ L KE++ K +
Sbjct: 240 RDGCIDAAISLFKEMETKGI 259
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 10/213 (4%)
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+ + + + L P ++N L GK + E + L +MV +G
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS-------EAV-VLVDRMVENGC 189
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+PD+ + NS++ G S + AL + +M N + F+Y +I LC G A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
L EM+ KG S +YNSLV L G+ + L +M+ ++ + IT+ +LD
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 371 CRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
+ G+ EA +L KE+ + + TY L+D
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 199 MKNSRNLECRPSIR---SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
MK RN+ R + +Y+IL F GK LF++MV+ G+ PD+
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE--------LFQEMVSHGVLPDVM 439
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM-------GVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
+ ++ G + + AL IF + G+V Y +I G+C G+ ++
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM--------YTTIIEGMCKGGKVED 491
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L + KG P+ +Y ++S L G + E L +M E + TY T++
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 369 EICRRGRAGEAMKLLKELQN 388
R G + KL++E+++
Sbjct: 552 AHLRDGDLTASAKLIEEMKS 571
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ ++ F ++ K+ A +F+ M + L P + +Y IL GK +
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVL---PDVMTYGILLDGLCDNGK--------L 454
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +F+ + ++ I ++I+G V DA +F + PN +Y
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC-KGVKPNVMTYTV 513
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC +G A L +M+ G P+ +YN+L+ A +G++ + K + EM
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 356 RPVDFITYRTVLD 368
D + + V+D
Sbjct: 574 FSADASSIKMVID 586
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 136 DASTYHIMTRKL---GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+A TY I+ + G K+ +E+ Q + + Y ++ + KL +A
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEEL----FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F+ ++ S+ I Y + GK +E LF + G++P
Sbjct: 458 LEIFEDLQKSKM---DLGIVMYTTIIEGMCKGGK--------VEDAWNLFCSLPCKGVKP 506
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + MI G +++A + +M N PN +Y+ LI G + +L
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
+EMK GF + S ++ L L+GE++++
Sbjct: 566 IEEMKSCGFSADASSIKMVIDML-LSGELDKS 596
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 121/258 (46%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 154 KDGDIRJAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLASG-- 207
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K N LF +M+ G+ P+ ++I G+
Sbjct: 208 -VQPDVYTYSVLINGXCKESKXDDANE--------LFDEMLVKGLVPNXVXFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A L DEM KG P
Sbjct: 259 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C GR+ +A K+L+E
Sbjct: 318 ITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLKPDARTYTMIIN 395
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++ G+++E
Sbjct: 137 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 196
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ M+ D TY +++ C+ + +A +L E+ K L+ + +T L+D
Sbjct: 197 FRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLID 255
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 12/232 (5%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T YN++I +A + S A + + M S C P I +Y L T F K+
Sbjct: 53 TAVTYNSLISGLCKAERASEAYDLLEEMVYS---GCIPDIFTYTTLITGFCKSKKSD--- 106
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ +R +F+Q+V G PD+ + + +I G + +A+ +F +M + +PN+
Sbjct: 107 ----DALR-VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTV 161
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LI G C G+ A L + M G P +Y +L++ +++ L +M
Sbjct: 162 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 221
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
K + +T+ +++D +CR R +A+ +L E++ K+ YTY +LD
Sbjct: 222 TRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILD 273
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 15/270 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + +K + V Q++A F Y+ +I + +L A+ +
Sbjct: 88 DIFTYTTLITGFCKSKKSDDALRVFEQLVAR-GFRPDVVTYSCLIDGLCKEGRLKEAIDL 146
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M S + C P+ +YN L + F GK M+ L ++M G PD+
Sbjct: 147 FGRMIKSGS--CMPNTVTYNSLISGFCRMGK--------MDEAMNLLERMAETGSSPDVV 196
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +++ G+ ++DA + +QM PN ++ L+ GLC + R +A + E
Sbjct: 197 TYTTLMNGFCKLARLDDAYDLLNQM-TRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGE 255
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+RK P+ +YN+++ ++EE K + E E P + +++ ++ +C+ R
Sbjct: 256 MRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE--EMDCPPNVVSFNIMIRGLCKVNR 313
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ EAM+L++E + + D YT ++DVL
Sbjct: 314 SSEAMELVEEARRRRCNPDVVMYTTVIDVL 343
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 16/251 (6%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYV 195
A TY+ + L A+ E D++ +M+ S C + Y T+I F +++K A+ V
Sbjct: 54 AVTYNSLISGLCKAERASEAYDLLEEMVY--SGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG-IEPDI 254
F+ + +R RP + +Y+ L G+ E I LF +M+ G P+
Sbjct: 112 FEQLV-ARGF--RPDVVTYSCLIDGLCKEGR-------LKEAID-LFGRMIKSGSCMPNT 160
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ NS+I G+ +++A+ + +M + P+ +Y L++G C R +A +L +
Sbjct: 161 VTYNSLISGFCRMGKMDEAMNLLERMAETGSS-PDVVTYTTLMNGFCKLARLDDAYDLLN 219
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M RKG P+ ++ SL+ L + + V L EM K TY T+LD CR
Sbjct: 220 QMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVN 279
Query: 375 RAGEAMKLLKE 385
+ EA K + E
Sbjct: 280 QLEEARKFMLE 290
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 20/257 (7%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FR D TY + L +E D+ +M+ + S YN++I F K+ A
Sbjct: 120 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 179
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAF--LSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+ + + M + + P + +Y L F L+R + Y L QM G+
Sbjct: 180 MNLLERMAETGS---SPDVVTYTTLMNGFCKLARLDDAYD----------LLNQMTRKGL 226
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P++ + S++ G N ++DA+ I +M + P ++Y+ ++ G C + + AR
Sbjct: 227 TPNVVTFTSLMDGLCRENRLSDAVHILGEMRR-KSCSPTVYTYNTILDGYCRVNQLEEAR 285
Query: 311 E-LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+ + +EM P+ S+N ++ L E ++ + E ++ D + Y TV+D
Sbjct: 286 KFMLEEMD---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDV 342
Query: 370 ICRRGRAGEAMKLLKEL 386
+CR + EA ++ +++
Sbjct: 343 LCREKKVDEACRVYRKM 359
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%)
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+P + +Y+ LI GLC R A +L +EM G +P +Y +L++ + + ++ ++
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+++ + D +TY ++D +C+ GR EA+ L +
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRM 150
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
VP++ +YNSL+S L E L EM+ D TY T++ C+ ++ +A++
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 382 LLKELQNKNL-IDGYTYTKLLDVL 404
+ ++L + D TY+ L+D L
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGL 134
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 21/245 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTII + R+++ A +F M P I +YN L A N
Sbjct: 171 YNTIIDSLCKDRQVTEAFNLFSEMVTK---GISPDIFTYNSLIHAL--------CNLCEW 219
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + L +MV+ I PD+ S N+++ V +A + +M +PN SY+
Sbjct: 220 KHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNT 279
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C R A L EM R+ +P + +Y++L+ L +++ + EM+
Sbjct: 280 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 339
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVLE 405
+ + +TYR +LD +C+ EAM LLK ++ NL IDG L+
Sbjct: 340 QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 399
Query: 406 DDFGN 410
D F N
Sbjct: 400 DLFSN 404
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 22/221 (9%)
Query: 209 PSIRSYNILFTAF--LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
P+I + +IL +F L+RGK H LF +M+ +G PD+ + ++I G
Sbjct: 94 PNIYTLHILINSFCHLNRGKIGEALH--------LFDKMIGEGFRPDVVTYGTLINGLCK 145
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ + A+R+ M V N PN F+Y+ +I LC + A L EM KG P
Sbjct: 146 VGNTSAAIRLLGSM-VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIF 204
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YNSL+ AL E + L EM++ + D +++ TV+D +C+ G+ EA ++ ++
Sbjct: 205 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM 264
Query: 387 QNKN-----------LIDGYTYTKLLDVLEDDFGNSIRHHL 416
+ LI+GY + +D FG R L
Sbjct: 265 IQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 305
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 130/319 (40%), Gaps = 49/319 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + L ++ + ++N+M+ + + +NT++ + K++ A V
Sbjct: 202 DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS-FNTVVDALCKEGKVTEAHDV 260
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M C P++ SYN L N Y ++ LF +M + PD
Sbjct: 261 VDKMIQRGG--CMPNVISYNTLI--------NGYCKIQRIDKAMYLFGEMCRQELIPDTV 310
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY----DYL--------------- 296
+ +++I G + DA+ +FH+M V + +PN +Y DYL
Sbjct: 311 TYSTLIHGLCHVERLQDAIALFHEM-VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKA 369
Query: 297 ----------------IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
I G+C G + AR+L + KG P +Y+ +++ L G
Sbjct: 370 IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGL 429
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
++E K EM E ++ Y T+ R A++LL+E+ + D T T
Sbjct: 430 LDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTL 489
Query: 400 LLDVLEDD-FGNSIRHHLR 417
+ +L DD S++ LR
Sbjct: 490 FVKMLSDDGLDQSLKQILR 508
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L+ + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVS----FNTLMNGYIKLGDLNEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANVLFDEMLDKGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + G PS S+N+L++
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G++ E + M D TY +++ +C+ + +A L E+ +K L+ +G
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M +P +Y L
Sbjct: 262 EIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKG---LKPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGNCKEGD--------LETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G++PS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 132/306 (43%), Gaps = 47/306 (15%)
Query: 134 RHDASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA 186
+ D TY + L A +++EM+ T + YN+++ +A
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEME--------TKGIKSSVVTYNSLVRGLCKA 276
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR------- 239
K + + K M + E P++ ++N+L F+ GK N +Y E I
Sbjct: 277 GKWNDGALLLKDMVSR---EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 240 ----------CL----------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
C+ MV + PDI + S+IKGY + V+D +++F
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
+ + N+ +Y L+ G C G+ K A EL EM G +P +Y L+ L NG
Sbjct: 394 ISK-RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYT 398
++E+ ++ ++ + + + + Y T+++ +C+ G+ +A L L K + + TYT
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 512
Query: 399 KLLDVL 404
++ L
Sbjct: 513 VMISGL 518
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ +F+ M SR L PS+ ++ F+A ++R K + KQ+ +GI
Sbjct: 72 AIALFQEMIRSRPL---PSLVDFSRFFSA-IARTKQ-------FNLVLDFCKQLELNGIA 120
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+I++LN MI + A + ++ + Y P++ +++ LI GL +G+ A
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKV-MKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L D M G P +YNS+V+ + +G+ + L +M E+ D TY T++D +C
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 372 RRGRAGEAMKLLKELQNKNL 391
R G A+ L KE++ K +
Sbjct: 240 RDGCIDAAISLFKEMETKGI 259
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 10/213 (4%)
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+ + + + L P ++N L GK + E + L +MV +G
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS-------EAV-VLVDRMVENGC 189
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+PD+ + NS++ G S + AL + +M N + F+Y +I LC G A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
L EM+ KG S +YNSLV L G+ + L +M+ ++ + IT+ +LD
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 371 CRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
+ G+ EA +L KE+ + + TY L+D
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR---SYNILFTAFLSRGKNTYINH 232
+ ++I + +++ + VF RN+ R + +Y+IL F GK
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVF------RNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-------GVVYN 285
LF++MV+ G+ PD+ + ++ G + + AL IF + G+V
Sbjct: 425 --------LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM- 475
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
Y +I G+C G+ ++A L + KG P+ +Y ++S L G + E
Sbjct: 476 -------YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
L +M E + TY T++ R G + KL++E+++
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ ++ F ++ K+ A +F+ M + L P + +Y IL GK +
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVL---PDVMTYGILLDGLCDNGK--------L 454
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +F+ + ++ I ++I+G V DA +F + PN +Y
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC-KGVKPNVMTYTV 513
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC +G A L +M+ G P+ +YN+L+ A +G++ + K + EM
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 356 RPVDFITYRTVLD 368
D + + V+D
Sbjct: 574 FSADASSIKMVID 586
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 19/203 (9%)
Query: 136 DASTYHIMTRKL---GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+A TY I+ + G K+ +E+ Q + + Y ++ + KL +A
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEEL----FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F+ ++ S+ I Y + GK +E LF + G++P
Sbjct: 458 LEIFEDLQKSKM---DLGIVMYTTIIEGMCKGGK--------VEDAWNLFCSLPCKGVKP 506
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + MI G +++A + +M N PN +Y+ LI G + +L
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 313 CDEMKRKGFVPSSKSYNSLVSAL 335
+EMK GF + S ++ L
Sbjct: 566 IEEMKSCGFSADASSIKMVIDML 588
>gi|297807861|ref|XP_002871814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317651|gb|EFH48073.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 12/263 (4%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L FNWA P + + Y + + L + K Y+ M ++ QM E L II
Sbjct: 95 LRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLC-FII 153
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ + + +AV +F + + L C+ ++ YN L A + + H IR
Sbjct: 154 EQYGKNGHVDQAVELFNGV--PKTLGCQQTVDVYNALLHALC----DVKMFHGAYALIR- 206
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+M+ G++PD + ++ G+ + + +A +M + P + D LI GL
Sbjct: 207 ---RMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR-KGFNPPARGRDLLIEGL 262
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
G ++A+E+ D+M + GFVP ++N+L+ A++ +GEVE ++ + + VD
Sbjct: 263 LNAGYLESAKEIVDKMTKGGFVPDILTFNTLIEAISKSGEVEFCIEMYYTACKLGLCVDI 322
Query: 361 ITYRTVLDEICRRGRAGEAMKLL 383
TY+T++ + + G+ EA +LL
Sbjct: 323 DTYKTLIPAVSKIGKIDEAFRLL 345
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 114/227 (50%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F++A ++ A VF M+ SR P + +YNI+ + SRGK +
Sbjct: 134 YNAMISGFSKANQIDSANQVFDRMR-SRGFS--PDVVTYNIMIGSLCSRGK--------L 182
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +++ DG +P + + +I+ IL +N+AL +F ++ V P+ ++Y+
Sbjct: 183 ELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDEL-VSRGLRPDLYTYNA 241
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C +G A + + +G P SYN L+ + E+ + + +M+
Sbjct: 242 IIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSG 301
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ +T+ ++ CR GR EA+ +L+ ++ K L D Y+Y L+
Sbjct: 302 CEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLI 348
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 46/286 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +Y+ M A + V ++M + F YN +I KL A
Sbjct: 130 DVYSYNAMISGFSKANQIDSANQVFDRM-RSRGFSPDVVTYNIMIGSLCSRGKLELA--- 185
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ M C+PS+ +Y IL A + G+ IN LF ++V+ G+ PD++
Sbjct: 186 FEVMDELLKDGCKPSVITYTILIEATILEGR---INEALE-----LFDELVSRGLRPDLY 237
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL-------------------- 287
+ N++I+G + AL + V YN L
Sbjct: 238 TYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDM 297
Query: 288 ------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
PN ++ LI C +GR + A + + MK KG P S SY+ L+SA G +
Sbjct: 298 VLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRL 357
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ ++ L +M+ D + Y T+L +C+ G A A+ + ++L
Sbjct: 358 DLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLD 403
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 15/267 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI-IYFFAEARKLSRAVY 194
D +Y+I+ R +++ + ++ M+ S C + ++I I F ++ AV
Sbjct: 270 DVVSYNILLRSFLNKSRWEDGERLMKDMVL--SGCEPNVVTHSILISSFCREGRVREAVN 327
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
V + MK P SY+ L +AF G+ + Y+E +MV+DG PDI
Sbjct: 328 VLEVMKEKG---LTPDSYSYDPLISAFCKEGR-LDLAIEYLE-------KMVSDGCLPDI 376
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N+++ + AL +F ++ V P +Y+ + L + G A E+
Sbjct: 377 VNYNTILATLCKFGCADLALDVFEKLDEV-GCPPTVRAYNTMFSALWSCGNKIKALEMIS 435
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM RKG P +YNSL+S L +G V+E + L +M + I++ VL +C+
Sbjct: 436 EMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAH 495
Query: 375 RAGEAMKLLKELQNKNLIDGYTYTKLL 401
R E ++LL + K + T LL
Sbjct: 496 RVFEGIELLITMVEKGCLPNETSYVLL 522
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 95/181 (52%), Gaps = 10/181 (5%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHG 299
+ +V+ G +PD+ +IKG+ S ++ A+R+ M ++ Y P+ +SY+ +I G
Sbjct: 84 FLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRV---MEILETYGDPDVYSYNAMISG 140
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
+ +A ++ D M+ +GF P +YN ++ +L G++E + + E+++
Sbjct: 141 FSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPS 200
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL-----DVLEDDFGNSIR 413
ITY +++ GR EA++L EL ++ L D YTY ++ + +ED + +R
Sbjct: 201 VITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVR 260
Query: 414 H 414
H
Sbjct: 261 H 261
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 16/268 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTI 179
LELF+ + R D TY+ + R + M D V + A C + + YN +
Sbjct: 221 LELFDELVSR-GLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARG--CNPDVVSYNIL 277
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ F + + K M S C P++ +++IL ++F G+ E +
Sbjct: 278 LRSFLNKSRWEDGERLMKDMVLSG---CEPNVVTHSILISSFCREGR-------VREAVN 327
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
L + M G+ PD +S + +I + ++ A+ +M V LP+ +Y+ ++
Sbjct: 328 VL-EVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKM-VSDGCLPDIVNYNTILAT 385
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC G A ++ +++ G P+ ++YN++ SAL G + ++ + EMI K D
Sbjct: 386 LCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPD 445
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQ 387
ITY +++ +CR G EA+ LL +++
Sbjct: 446 EITYNSLISCLCRDGLVDEAIGLLVDME 473
>gi|357499665|ref|XP_003620121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495136|gb|AES76339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 408
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 35/273 (12%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLS 190
++D Y + L K+ + D+ +M+A +P YN +IY F +L
Sbjct: 151 QYDVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDV----FTYNAMIYGFCVVGRLK 206
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A+ +F MK N+E ++N L +AF G + + + M+ +G+
Sbjct: 207 DAIGLFNDMK-LENVEADE--YTFNTLVSAFCKEGN--------VREGKAVVAVMMKEGV 255
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNY--------------LPNSFSY 293
+PDI + NS++ GY L V+ A IF+ M GV N +P++ +Y
Sbjct: 256 KPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRTMNLFQEMHCKEIIPDTIAY 315
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI G C GR A EL DEM +G P+ +YNS++ AL VE+T+ L ++
Sbjct: 316 SSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKV 375
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
K D TY + + + + GR EA ++ +L
Sbjct: 376 KGIQPDAYTYTILTNGLFKDGRLEEAREIFPDL 408
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 33/227 (14%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETI---RC----------LFKQMVNDGIEPDI 254
+P + +YN+L F G +++ V ET+ C L K++ ++ D+
Sbjct: 95 KPDLFTYNVLINCFSQLGHTHFLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDV 154
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
++I G V+DA ++ +M V P+ F+Y+ +I+G C GR K+A L +
Sbjct: 155 VMYTAIINGLCKDKLVDDAFDLYTEM-VAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFN 213
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC--- 371
+MK + ++N+LVSA G V E + M+++ D ITY +++D C
Sbjct: 214 DMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVK 273
Query: 372 -------------RRGRAGEA--MKLLKELQNKNLI-DGYTYTKLLD 402
+RG M L +E+ K +I D Y+ L+D
Sbjct: 274 EVDKAKNIFNTMVQRGVTANVRTMNLFQEMHCKEIIPDTIAYSSLID 320
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
GI+PD+F+ N +I F Q+G + + + SY+ LI+GLC G T+
Sbjct: 93 GIKPDLFTYNVLIN-------------CFSQLG--HTHFLDRVSYETLINGLCKVGETRA 137
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L E+ K Y ++++ L + V++ EM+ K+ D TY ++
Sbjct: 138 ALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIY 197
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
C GR +A+ L +++ +N+ D YT+ L+
Sbjct: 198 GFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLV 231
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S L
Sbjct: 151 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGHLDEGFRLKSAMLASGVL 206
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 207 ---PDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLIPNGVTFTTLIDGHC 255
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ +M + + LP+ +Y+ LI+GLC +G K A +L DEM KG P
Sbjct: 256 KNGRVDFAMEIYKRM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 314
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 315 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLRE 374
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 375 MLSVGLKPDTGTYTMIIN 392
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
++K+M++ + PD+ + N++I G + A + +M + P+ F+Y LI G
Sbjct: 266 IYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM-KGLKPDKFTYTTLIDGC 324
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A E M ++ +Y +L+S L G + K L EM+ D
Sbjct: 325 CKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDT 384
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQ 387
TY +++E C++G + KLLKE+Q
Sbjct: 385 GTYTMIINEFCKKGDVWKGSKLLKEMQ 411
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++ G ++E
Sbjct: 134 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEG 193
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ M+ D TY +++ +C+ + +A +L E+ K LI +G T+T L+D
Sbjct: 194 FRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLID 252
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 125/292 (42%), Gaps = 46/292 (15%)
Query: 134 RHDASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA 186
+ D TY + L A +++EM+ T + YN+++ +A
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEME--------TKGIKSSVVTYNSLVRGLCKA 276
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR------- 239
K + + K M + E P++ ++N+L F+ GK N +Y E I
Sbjct: 277 GKWNDGALLLKDMVSR---EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 240 ----------CL----------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
C+ MV + PDI + S+IKGY + V+D +++F
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
+ + N+ +Y L+ G C G+ K A EL EM G +P +Y L+ L NG
Sbjct: 394 ISK-RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
++E+ ++ ++ + + + + Y T+++ +C+ G+ +A L L K +
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ +F+ M SR L P + ++ F+A ++R K + KQ+ +GI
Sbjct: 72 AIALFQEMIRSRPL---PGLVDFSRFFSA-IARTKQ-------FNLVLDFCKQLELNGIA 120
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+I++LN MI + A + ++ + Y P++ +++ LI+GLC +G+ A
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKV-MKLGYEPDTTTFNTLINGLCLEGKVSKAVV 179
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L D M G P +YNS+V+ + +G+ L +M E+ D TY T++D +C
Sbjct: 180 LVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLC 239
Query: 372 RRGRAGEAMKLLKELQNKNL 391
R G A+ L KE++ K +
Sbjct: 240 RDGCIDAAISLFKEMETKGI 259
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 10/213 (4%)
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+ + + + L P ++N L GK + L +MV +G
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGK--------VSKAVVLVDRMVENGC 189
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+PD+ + NS++ G S + A + +M N + F+Y +I LC G A
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
L EM+ KG S +YNSLV L G+ + L +M+ ++ + IT+ +LD
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 371 CRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
+ G+ EA +L KE+ + + TY L+D
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 199 MKNSRNLECRPSIR---SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
MK RN+ R + +Y+IL F GK LF++MV+ G+ PD+
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE--------LFQEMVSHGVLPDVM 439
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM-------GVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
+ ++ G + + AL IF + G+V Y +I G+C G+ ++
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM--------YTTIIEGMCKGGKVED 491
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L + KG P+ +Y ++S L G + E L +M E + TY T++
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 369 EICRRGRAGEAMKLLKELQN 388
R G + KL++E+++
Sbjct: 552 AHLRDGDLTASAKLIEEMKS 571
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ ++ F ++ K+ A +F+ M + L P + +Y IL GK +
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVL---PDVMTYGILLDGLCDNGK--------L 454
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +F+ + ++ I ++I+G V DA +F + PN +Y
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC-KGVKPNVMTYTV 513
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC +G A L +M+ G P+ +YN+L+ A +G++ + K + EM
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 356 RPVDFITYRTVLD 368
D + + V+D
Sbjct: 574 FSADASSIKMVID 586
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 136 DASTYHIMTRKL---GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+A TY I+ + G K+ +E+ Q + + Y ++ + KL +A
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEEL----FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F+ ++ S+ I Y + GK +E LF + G++P
Sbjct: 458 LEIFEDLQKSKM---DLGIVMYTTIIEGMCKGGK--------VEDAWNLFCSLPCKGVKP 506
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + MI G +++A + +M N PN +Y+ LI G + +L
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
+EMK GF + S ++ L L+GE++++
Sbjct: 566 IEEMKSCGFSADASSIKMVIDML-LSGELDKS 596
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 1/168 (0%)
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+R F + + G PD F+ N ++ + + + +A+ + +MG PN+FSY+ +I
Sbjct: 144 VRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVI 203
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
G+ GR +A E+ DEM + +P+ +YN+++ G++E +M+
Sbjct: 204 AGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLK 263
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ ITY +L +CR GR GE LL E+ ++ ++ DG+TY+ L D L
Sbjct: 264 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 311
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 90/164 (54%), Gaps = 2/164 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ + +VN G+ P N++I GY + + A F QM + P+ +Y+ LI+GL
Sbjct: 358 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH-IKPDHITYNALINGL 416
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C R NA++L EM+ G P+ +++N+L+ A G++E+ L EM E +
Sbjct: 417 CKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNV 476
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
++Y ++++ C+ G+ EA+ +L ++ +K+++ + Y ++D
Sbjct: 477 VSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDA 520
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 106/252 (42%), Gaps = 21/252 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N + A L AV + + M R+ P+ SYN++ G+ V
Sbjct: 163 WNKAVQACVAAGDLGEAVGMLRRM--GRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV-- 218
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F +M + P+ + N+MI G+I + + QM V + PN+ +Y+
Sbjct: 219 ------FDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQM-VCHGLKPNAITYNV 271
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC GR L DEM + VP +Y+ L L+ NG+ + + + ++
Sbjct: 272 LLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNG 331
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVLE 405
+ T +L+ +C+ G+ A ++L+ L N LI+GY T L+
Sbjct: 332 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAF 391
Query: 406 DDFGNSIRHHLR 417
FG H++
Sbjct: 392 STFGQMKSRHIK 403
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 15/244 (6%)
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
V Q L T +YNT+I + + +L A F MK SR++ +P +YN L
Sbjct: 358 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK-SRHI--KPDHITYNALIN 414
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
+ T + ME M ++G+ P + + N++I Y + + + +
Sbjct: 415 GLCKAERITNAQDLLME--------MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 466
Query: 280 MGVVYNYL-PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
M N L PN SY +++ C G+ A + D+M K +P+++ YN+++ A +
Sbjct: 467 M--QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEH 524
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G ++ + +M +TY ++ +C + + EA +++ L N LI D +Y
Sbjct: 525 GPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 584
Query: 398 TKLL 401
L+
Sbjct: 585 NTLI 588
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 104/272 (38%), Gaps = 57/272 (20%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I A + AV VF M L P+ +YN + + G +
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVL---PNHITYNTMIDGHIKGGD--------L 247
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY-- 293
E L QMV G++P+ + N ++ G + + + + +M +P+ F+Y
Sbjct: 248 EAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM-ASQKMVPDGFTYSI 306
Query: 294 -----------------------------DY----LIHGLCAQGRTKNARELCDEMKRKG 320
DY L++GLC G+ A E+ + G
Sbjct: 307 LFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 366
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
VP+ YN+L++ GE+E +M + D ITY +++ +C+ R A
Sbjct: 367 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 426
Query: 381 KLLKELQNKN----------LIDGYTYTKLLD 402
LL E+Q+ LID Y T L+
Sbjct: 427 DLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 458
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I +A +++ A + M+++ P++ ++N L A+ G+ +
Sbjct: 409 YNALINGLCKAERITNAQDLLMEMQDNG---VNPTVETFNTLIDAYGRTGQ--------L 457
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +M +G++P++ S S++ + + + +A+ I M + LPN+ Y+
Sbjct: 458 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM-FHKDVLPNAQVYNA 516
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G A L ++MK G PS +YN L+ L ++ E + + + +
Sbjct: 517 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 576
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
D ++Y T++ C RG +A+ L + +
Sbjct: 577 LIPDAVSYNTLISACCYRGNIDKALDLQQRMH 608
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I+ F + K+ AV + M + L P+ + YN + A++ G N
Sbjct: 479 YGSIVNAFCKNGKIPEAVAILDDMFHKDVL---PNAQVYNAIIDAYVEHGPN-------- 527
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L ++M ++GI P I + N +IKG + +++A I + + + +P++ SY+
Sbjct: 528 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN-HRLIPDAVSYNT 586
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI C +G A +L M + G + ++Y+ L+S L G + E +M++
Sbjct: 587 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNN 646
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKN 390
+ +++ + G +A L KE LQ +N
Sbjct: 647 VVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRN 682
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L+ + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVS----FNTLMNGYIKLGDLNEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANVLFDEMLDKGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+HG +G + A+ + D + + G PS S+N+L++
Sbjct: 123 FYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G++ E + M D TY +++ +C+ + +A L E+ +K L+ +G
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 121/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVS----FNTLMNGYIKLGNLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G +E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + G PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G ++E + M D TY +++ +C+ + +A +L E+ + L+ +G
Sbjct: 183 KLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G ++ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGSCKEG--------HLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G+ PS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPS 415
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 91/168 (54%), Gaps = 1/168 (0%)
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+R F + + G PD F+ N ++ + + + +A+ + +MG PN+FSY+ +I
Sbjct: 11 VRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVI 70
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
G+ GR +A E+ DEM + +P+ +YN+++ G++E + +M+
Sbjct: 71 AGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLK 130
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ ITY +L +CR GR GE LL E+ ++ ++ DG+TY+ L D L
Sbjct: 131 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 178
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 130/276 (47%), Gaps = 22/276 (7%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ +A TY+++ L A E ++++M + + +I++ S+A
Sbjct: 129 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV--PDGFTYSILFDGLSRNGDSKA 186
Query: 193 VYVF--KYMKNSRNLECRPSIRSY--NILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ KY+KN +I Y +IL GK + V + +VN
Sbjct: 187 MLSLFGKYLKNG------VTIGDYTCSILLNGLCKDGKVSIAEEV--------LQSLVNA 232
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+ P N++I GY + + A F QM + P+ +Y+ LI+GLC R N
Sbjct: 233 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH-IKPDHITYNALINGLCKAERITN 291
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A++L EM+ G P+ +++N+L+ A G++E+ L EM E + ++Y ++++
Sbjct: 292 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 351
Query: 369 EICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
C+ G+ EA+ +L ++ +K+++ + Y ++D
Sbjct: 352 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDA 387
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 21/252 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N + A L AV + + M R+ P+ SYN++ G+ V
Sbjct: 30 WNKAVQACVAAGDLGEAVGMLRRM--GRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEV-- 85
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F +M + P+ + N+MI G+I + R+ QM V + PN+ +Y+
Sbjct: 86 ------FDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM-VCHGLKPNAITYNV 138
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC GR L DEM + VP +Y+ L L+ NG+ + + + ++
Sbjct: 139 LLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG 198
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVLE 405
+ T +L+ +C+ G+ A ++L+ L N LI+GY T L+
Sbjct: 199 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAF 258
Query: 406 DDFGNSIRHHLR 417
FG H++
Sbjct: 259 STFGQMKSRHIK 270
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 15/244 (6%)
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
V Q L T +YNT+I + + +L A F MK SR++ +P +YN L
Sbjct: 225 VLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK-SRHI--KPDHITYNALIN 281
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
+ T + ME M ++G+ P + + N++I Y + + + +
Sbjct: 282 GLCKAERITNAQDLLME--------MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSE 333
Query: 280 MGVVYNYL-PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
M N L PN SY +++ C G+ A + D+M K +P+++ YN+++ A +
Sbjct: 334 M--QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEH 391
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G ++ + +M +TY ++ +C + + EA +++ L N LI D +Y
Sbjct: 392 GPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSY 451
Query: 398 TKLL 401
L+
Sbjct: 452 NTLI 455
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 98/212 (46%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I +A +++ A + M+++ P++ ++N L A+ G+ +
Sbjct: 276 YNALINGLCKAERITNAQDLLMEMQDNG---VNPTVETFNTLIDAYGRTGQ--------L 324
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +M +G++P++ S S++ + + + +A+ I M + LPN+ Y+
Sbjct: 325 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM-FHKDVLPNAQVYNA 383
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G A L ++MK G PS +YN L+ L ++ E + + + +
Sbjct: 384 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 443
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
D ++Y T++ C RG +A+ L + +
Sbjct: 444 LIPDAVSYNTLISACCYRGNIDKALDLQQRMH 475
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 13/216 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I+ F + K+ AV + M + L P+ + YN + A++ G N
Sbjct: 346 YGSIVNAFCKNGKIPEAVAILDDMFHKDVL---PNAQVYNAIIDAYVEHGPN-------- 394
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L ++M ++GI P I + N +IKG + +++A I + + + +P++ SY+
Sbjct: 395 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN-HRLIPDAVSYNT 453
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI C +G A +L M + G + ++Y+ L+S L G + E +M++
Sbjct: 454 LISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNN 513
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKN 390
+ +++ + G +A L KE LQ +N
Sbjct: 514 VVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRN 549
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I++ +A KL A+ +F MK + +PSI +YN L + +G M
Sbjct: 404 YNNLIHWHCQAHKLREALNLFDRMKKA---GVKPSINTYNSLLMGYCKKG--------CM 452
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ L+ +M +G +P++ + ++++GYI ++A + +M GV N ++
Sbjct: 453 DEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCN----DYT 508
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI+G+C R + +GF+P+ +YNS+++ G + +M
Sbjct: 509 YNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMR 568
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
EK P + ITY + +D CR G + A+K+L +++ + L
Sbjct: 569 EKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGL 607
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 14/269 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F+ + TY + R A K + ++++M C + YN +I + R
Sbjct: 467 FKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSC-NDYTYNVLINGIC---MVDRV 522
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V +K+ + P++ +YN + F+ G M + +++QM G+ P
Sbjct: 523 CEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAG--------MMGSAFTVYQQMREKGLPP 574
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+I + S I GY + + AL++ + + P+ +Y+ LI+G C +G +A +L
Sbjct: 575 NIITYTSFIDGYCRTGCSDMALKMLNDV-RRRGLQPDIVAYNALINGFCQEGNMSHALQL 633
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+ + G P++ YNSL++ ++E K MI+ D TY T++D +
Sbjct: 634 LVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSK 693
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKL 400
G A++L E+ K I D +T+T L
Sbjct: 694 DGNVAFALELYSEMMAKGYIPDAFTFTAL 722
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +QM G+ P F L+ ++KG + DA+ +F +M + LP+ F+Y+ LIH
Sbjct: 354 LCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMA--DSGLPDVFTYNNLIHWH 411
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C + + A L D MK+ G PS +YNSL+ G ++E VK EM + +
Sbjct: 412 CQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNV 471
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLD 402
+TY T++ + A LL E+ QN + YTY L++
Sbjct: 472 VTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLIN 514
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 122/297 (41%), Gaps = 45/297 (15%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+++ + E+D ++ ++ F T YN+II F +A + A V++
Sbjct: 508 TYNVLINGICMVDRVCEVDGMLKSFMSE-GFIPTMMTYNSIINGFVKAGMMGSAFTVYQQ 566
Query: 199 MK--------------------------------NSRNLECRPSIRSYNILFTAFLSRGK 226
M+ + R +P I +YN L F G
Sbjct: 567 MREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGN 626
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
++H L ++ DG+ P+ NS+I GY N + + + + M +
Sbjct: 627 ---MSHALQ-----LLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESM-IKGGI 677
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ ++ +Y LI G G A EL EM KG++P + ++ +L L +G+++ K
Sbjct: 678 VADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKK 737
Query: 347 NLWEMIE-KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
L EM RP FI Y +++ R + EA +L E+ N + D TY L+
Sbjct: 738 LLEEMRRLDVRPNVFI-YNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
CLF++M + G+ PD+F+ N++I + ++ + +AL +F +M P+ +Y+ L+ G
Sbjct: 388 CLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKA-GVKPSINTYNSLLMG 445
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
C +G A +L EM +GF P+ +Y +L+ + + L EM + +
Sbjct: 446 YCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCN 505
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
TY +++ IC R E +LK ++ I
Sbjct: 506 DYTYNVLINGICMVDRVCEVDGMLKSFMSEGFI 538
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-GVVYNYLPNSFSYDYLIHG 299
LF +M G D + ++++ + DA+R+F +M G + P+ Y I
Sbjct: 179 LFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEID--PDQRVYALAITA 236
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC G A + EMK GF +Y ++V L G +EE ++ EM + + +D
Sbjct: 237 LCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMD 296
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
I T++ C R G A+ L KE L DG TK++
Sbjct: 297 VIVATTLMRGYCLRQEVGNALNLFKE----TLKDGIVPTKVM 334
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+ MV G+ PDI S ++ + DAL +F +M Y +++ +D L+
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEM-RGRGYRVDAWMFDALMSACL 203
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+G ++A L DEM P + Y ++AL G+ ++ L EM E
Sbjct: 204 KEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDF 263
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKN 390
TYRT++D + + GR EA+++ E+++
Sbjct: 264 TYRTMVDVLVKTGRMEEALRVNDEMRDAG 292
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 9/162 (5%)
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGL 300
+M + G + D+ ++++GY L V +AL +F + G+V P Y LI G
Sbjct: 287 EMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIV----PTKVMYGVLIRGC 342
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
G T+ A ELC +M +G +PS+ + ++ L + ++ V EM + P D
Sbjct: 343 DQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DV 401
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLL 401
TY ++ C+ + EA+ L ++ + TY LL
Sbjct: 402 FTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLL 443
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L+ +M+ G PD F+ ++ G S ++ A ++ +M + + PN F Y+ LI+G
Sbjct: 703 LYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRL-DVRPNVFIYNMLINGY 761
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
+ + A L DEM G P +Y+ LVS
Sbjct: 762 LRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
K+A L EM+ +G+ + +++L+SA G E+ V+ EM + D Y
Sbjct: 173 AKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYAL 232
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLID-GYTYTKLLDVL 404
+ +C+ G G A+++L+E++ +TY ++DVL
Sbjct: 233 AITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVL 272
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 26/295 (8%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL- 175
P + ++ F+WA +Q ++HD +Y+ + L + V +L S C +
Sbjct: 7 PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLH--SGCSPNLVT 64
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ +I +A + +RA ++++ P + +N L G
Sbjct: 65 FKILIRGNCKAGQATRA---LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPD------- 114
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM----GVVYNYLPNSF 291
+ ++ LF+ M + + PDIF+ N++I G S ++ A + +M G P+
Sbjct: 115 QAVK-LFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGG---KSAPDIV 170
Query: 292 SYDYLIH-GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y+ LI+ G+C G + A E+ D MK G P +YNS++ AL + G V E + L
Sbjct: 171 TYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKT 230
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
M P D +T+ T+LD C+ G A+++L+E+ +N++ D TYT L++ L
Sbjct: 231 M--SCSP-DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGL 282
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 135/324 (41%), Gaps = 49/324 (15%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
E+ L L+ A P D TY+ + L A E +++ M +P
Sbjct: 187 EEALEILDGMKLAGPAP----DVITYNSIIHALCVAGRVVEAAEILKTMSCSPDL----V 238
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG--------- 225
+NT++ F +A L RA+ V + M L P + +Y IL G
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENIL---PDVITYTILVNGLCRVGQVQVAFYLL 295
Query: 226 ----KNTYINHVYMET-----------------------IRCLFKQMVNDGIEPDIFSLN 258
+ YI V T R + +MV+ + P +F+ N
Sbjct: 296 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYN 355
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++ G I ++ A+ + + V Y+P+ +Y+ LI GLC R + A +L DEM
Sbjct: 356 IVLGGLIKDGSISKAVSLISDL-VARGYVPDVVTYNTLIDGLCKANRVREACDLADEMAS 414
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G P+ + S+V L G V++ + EM K+ + + Y +++D +C+ R +
Sbjct: 415 LGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDD 474
Query: 379 AMKLLKELQNKNL-IDGYTYTKLL 401
A +L ++ + + +D + Y KL+
Sbjct: 475 ACVVLDAMRGQGVALDDFAYRKLI 498
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 132/285 (46%), Gaps = 27/285 (9%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTII-YFFAEARKL 189
R D TY+ + L + ++ +++ +M+ + + YNT+I + +
Sbjct: 127 RVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDV 186
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A+ + MK + P + +YN + A G+ + ++T+ C
Sbjct: 187 EEALEILDGMKLAGP---APDVITYNSIIHALCVAGRVVEAAEI-LKTMSC--------- 233
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
PD+ + N+++ G+ + + AL + +M N LP+ +Y L++GLC G+ + A
Sbjct: 234 -SPDLVTFNTLLDGFCKAGMLPRALEVLEEM-CRENILPDVITYTILVNGLCRVGQVQVA 291
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI-------- 361
L +E+ R+G++P +Y SLV L +GE+EE K + EM ++ + +
Sbjct: 292 FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPL 351
Query: 362 -TYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
TY VL + + G +A+ L+ +L + + D TY L+D L
Sbjct: 352 FTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGL 396
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 10/217 (4%)
Query: 185 EARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQ 244
EA KL + + + + ++ P + +YNI+ + G + L
Sbjct: 325 EAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGS--------ISKAVSLISD 376
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
+V G PD+ + N++I G +N V +A + +M + + PN + ++ GLC G
Sbjct: 377 LVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF-PNDVTLGSVVFGLCRVG 435
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R +A L EM RK P+ Y SL+ L + +++ L M + +D YR
Sbjct: 436 RVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYR 495
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKL 400
++ + GR EAM + E+ + + DG T L
Sbjct: 496 KLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 20/184 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I +A ++ A + M + L C P+ + + G+ +
Sbjct: 389 YNTLIDGLCKANRVREACDLADEMAS---LGCFPNDVTLGSVVFGLCRVGR--------V 437
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ L +M P++ S+I G S+ ++DA + M GV + F+
Sbjct: 438 DDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALD----DFA 493
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI + GR A + DEM +GF+P + +L A N E T NL E
Sbjct: 494 YRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFEWT--NLEENA 551
Query: 353 EKQR 356
R
Sbjct: 552 SSDR 555
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHGAKKSEHALQFFRWVZRSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E L+ +I + +A + +V +F M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLQWDEDLWVLMIDSYGKAGIVQESVKLFHKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y++LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YDVLFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M + P+ +Y+ +I+G + + A + EMK + P+ ++ +L+
Sbjct: 170 XRFFEDMK-SRDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
V++ ++ + EM + ITY T L +C + EA LKE+ +K
Sbjct: 229 GYVAVDRVDDALRLVEEMKGFGIKPNAITYSTXLPGLCNAEKMSEARSXLKEMVDK 284
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 32/250 (12%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
PSF E +YN + A+K A+ F++++ S E R ++ L G
Sbjct: 7 VPSF-DHELVYNVL----HGAKKSEHALQFFRWVZRSNLFEHN---RETHLKIIEIL--G 56
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
+ + +NH RC+ M G++ D MI Y + V +++++FH+M GV
Sbjct: 57 RASKLNHA-----RCILLDMPKKGLQWDEDLWVLMIDSYGKAGIVQESVKLFHKMEELGV 111
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
SYD L + +GR A+ ++M +G P+ ++N ++ L+G+VE
Sbjct: 112 ERTIK----SYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVE 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LI 392
+ +M + D ITY T+++ R + EA K E++ +N LI
Sbjct: 168 TAXRFFEDMKSRDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLI 227
Query: 393 DGYTYTKLLD 402
GY +D
Sbjct: 228 KGYVAVDRVD 237
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 146/332 (43%), Gaps = 23/332 (6%)
Query: 75 GKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFR 134
G R K + A D P F L N M LFN + F
Sbjct: 329 GLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFP 388
Query: 135 HDASTYHIMTRKLGA-AKMYQEMDDVVNQMLATPSFCGTEAL---YNTIIYFFAEARKLS 190
+D TY I+ K+ DV L + G +A Y+++I + KL
Sbjct: 389 NDV-TYSILIDSFCKRGKL-----DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLR 442
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A +F M + +P++ Y L + + G+ + L+ +M GI
Sbjct: 443 AAKSLFDEMIAN---GLKPNVVIYTSLISGYCKEGE--------LHNAFRLYHEMTGKGI 491
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P+ ++ ++I G +N + +A ++F +M V +N +PN +Y+ LI G C +G T A
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEM-VEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
EL DEM KG VP + +Y L+S L G V E + + ++ +Q+ ++ + + +L
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGY 610
Query: 371 CRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
C+ GR +A+ +E+ + + +D Y+ L+
Sbjct: 611 CKEGRLDDALDACREMLGRGVAMDLVCYSVLI 642
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 15/282 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
R D TY + L + ++ ++++N+M+ F +EA + ++ RK
Sbjct: 281 LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEF-GFVPSEAAVSNLV---DGLRKKGNI 336
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
F + + PS+ YN L + GK ++ LF M + G+ P
Sbjct: 337 GSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK--------LDEAESLFNNMGHKGLFP 388
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + + +I + ++ AL +M V + Y LI G C G+ + A+ L
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEV-GIKATVYPYSSLISGHCKLGKLRAAKSL 447
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
DEM G P+ Y SL+S GE+ + EM K + T+ ++ +C
Sbjct: 448 FDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH 507
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLEDDFGNSIR 413
R EA KL E+ N+I + TY L++ + GN++R
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE-GNTVR 548
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YNIL F G+ V + M++ GI PD S +++I Y + +
Sbjct: 776 TYNILIRGFCKLGRIQEAAEVLV--------NMIDSGISPDCISYSTIIYEYCRRGDLKE 827
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A++++ M + P++ +Y++LI+G C G A EL D+M R+G P+ +YNSL+
Sbjct: 828 AIKLWESM-LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886
Query: 333 SALALNGEVEET 344
L V T
Sbjct: 887 HGTCLMSSVSST 898
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
LY T+I A+A L A ++ M + C P++ +Y L G
Sbjct: 671 VLYTTMIDANAKAGNLKMAFGLWDIMVSE---GCLPNVVTYTALINGLCKIG-------- 719
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
M+ L ++M+ P+ + + ++ A+++ H + ++ +L N+ +Y
Sbjct: 720 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDV-LLEGFLANTVTY 777
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE-MI 352
+ LI G C GR + A E+ M G P SY++++ G+++E +K LWE M+
Sbjct: 778 NILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIK-LWESML 836
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ D + Y ++ C G +A +L ++ + +
Sbjct: 837 NRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGV 875
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 17/232 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ +I A +++ A +F M + P+ +YN+L G
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVI---PNEVTYNVLIEGHCKEGN--------- 545
Query: 236 ETIRC--LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
T+R L +MV G+ PD ++ +I G + V++A + + L N +
Sbjct: 546 -TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL-NEMCF 603
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
L+HG C +GR +A + C EM +G Y+ L+ + + + L +M +
Sbjct: 604 SALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHD 663
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
+ D + Y T++D + G A L + ++ L + TYT L++ L
Sbjct: 664 QGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGL 715
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 130/334 (38%), Gaps = 52/334 (15%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEM--------------DDVV 160
+D + L FN+ F H +++ I+ L + +Y + +
Sbjct: 71 DDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLF 130
Query: 161 NQMLATPSFC--GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI-- 216
L + C T ++ +I + + R+ + V + M + L P IR+ +
Sbjct: 131 ESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGIL---PQIRTLSGVL 187
Query: 217 --------------LFTAFLSRGKNTYINHVYMETIRCL------------FKQMVNDGI 250
LF +S G + +VY +R L +M + G
Sbjct: 188 NGLIRIRQFRMALHLFDEIVSSGLRPDV-YVYTAVVRSLCELKDFIRAREVIGRMESSGC 246
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLCAQGRTKNA 309
+ + + N I+G + V +A+ I + + Y L + +Y L+ GLC +
Sbjct: 247 DLSVATYNVFIRGLCKNQRVWEAVEIKNLLS--YKGLRADVGTYCTLVLGLCKVEEFEAG 304
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
E+ +EM GFVPS + ++LV L G + + ++ + Y +++
Sbjct: 305 EEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364
Query: 370 ICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+C+ G+ EA L + +K L + TY+ L+D
Sbjct: 365 MCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 7/162 (4%)
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNH---VNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
++M+ G+ D+ + +I G + + D L+ H G+ P++ Y +I
Sbjct: 624 REMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGL----RPDNVLYTTMIDA 679
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
G K A L D M +G +P+ +Y +L++ L G +++ EM+ +
Sbjct: 680 NAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 739
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
TY LD + G +A++L L L + TY L+
Sbjct: 740 QNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILI 781
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ A + A + M +C ++NIL F G +
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQK---DCPLDDVTFNILVDFFCQNG--------LV 372
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + L +QM++ G PD+ + ++I G+ +++A+ + M PN+ SY
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC-GCKPNTVSYTI 431
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC+ GR +A EL +M ++G P+ ++N+L++ L G VE+ ++ L +M+
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D I+Y TV+D + + G+ EA++LL + NK +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 142/333 (42%), Gaps = 48/333 (14%)
Query: 72 RGVGKRSK-ADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQ 130
RG+ R + AD+ LD+ F+ + +PP ++ V LE A +
Sbjct: 119 RGLCTRGRIADALEVLDEMSFK-GCAPIPPMYH---------------VILEA---ACRS 159
Query: 131 PRFRHDASTYHIMTRK------------LGAAKMYQEMDDVVNQMLATPSFCGTEA---L 175
FR+ M K L A +D+ V +L +F G EA
Sbjct: 160 GGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVG-LLRKLAFFGCEADIVS 218
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ A++ V + M ++C P+I ++N L +L R N ++
Sbjct: 219 YNAVLKGLCMAKRWGD---VEELMDEMVRVDCAPNIVTFNTLI-GYLCR------NGLF- 267
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + + QM G PDI ++I G H+ A I ++M Y PN Y+
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS-YGLKPNVVCYNT 326
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC+ R K A EL EM +K ++N LV NG V+ ++ L +M+
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
D ITY TV++ C+ G EA+ LLK + +
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 16/274 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D T++I+ + + +++ QML+ C + + Y T+I F + + AV
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLS--HGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ K M + C+P+ SY I+ S G+ L QM+ G P+
Sbjct: 413 LLKSMSSCG---CKPNTVSYTIVLKGLCSAGRWVDAEE--------LMSQMIQQGCPPNP 461
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N++I V A+ + QM +V P+ SY +I GL G+T+ A EL +
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQM-LVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 520
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M KG P++ Y+S+ AL+ G V + ++ + + D + Y V+ +C+R
Sbjct: 521 VMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRW 580
Query: 375 RAGEAMKLLKEL-QNKNLIDGYTYTKLLDVLEDD 407
A+ + N + + TYT L+ L +
Sbjct: 581 ETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASE 614
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +++ G E DI S N+++KG ++ D + +M V + PN +++ LI L
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTFNTLIGYL 261
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G + E+ +M G P + Y +++ + G +E + L M +
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ Y TVL +C R EA +LL E+ K+ +D T+ L+D
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + N+M+ GY + + A R+ + V PN++++ ++ GLC +GR +A E+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVP----PNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM KG P Y+ ++ A +G +V+ L M K +D VL+ IC +
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 374 GRAGEAMKLLKEL 386
G EA+ LL++L
Sbjct: 195 GCVDEAVGLLRKL 207
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 9/185 (4%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P Y+++ A G + ++R L + M G D + N ++
Sbjct: 142 CAPIPPMYHVILEAACRSGG-------FRNSVRVL-EAMHAKGCTLDTGNCNLVLNAICE 193
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V++A+ + ++ + + SY+ ++ GLC R + EL DEM R P+
Sbjct: 194 QGCVDEAVGLLRKLAF-FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++N+L+ L NG E + L +M E D Y T++D IC+ G A ++L +
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 387 QNKNL 391
+ L
Sbjct: 313 PSYGL 317
>gi|297853270|ref|XP_002894516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340358|gb|EFH70775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 477
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 146/343 (42%), Gaps = 43/343 (12%)
Query: 81 DSKPALDDTQFRCAVSELPPRFNNEELCNVM-TLQED-----PLVCLELFNWASKQPRFR 134
++K ALDD +S L R E L ++ TL D + + F W Q FR
Sbjct: 95 NTKSALDD--LNVTISGLLVR---EVLVGILRTLSYDNKTRCAKLAYKFFVWFGGQENFR 149
Query: 135 HDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
H A+ YH++ + Y+ M ++++M+ + T +N +I EA L+R V
Sbjct: 150 HTANCYHLLMKIFAECGEYKAMCRLIDEMIK-DGYPTTACTFNLLICTCGEA-GLARDV- 206
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC-------------- 240
V +++K S+ RP SYN + + L + I+ VY + +
Sbjct: 207 VEQFIK-SKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFSPDVLTYNIVMF 265
Query: 241 -------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
L +MV DG PD+++ N ++ N AL + M V
Sbjct: 266 ANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLTHMREV-GVE 324
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P + L+ GL G+ + + DEM + G P Y +++ GE+E+ +
Sbjct: 325 PGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVGCTPDVVCYTVMITGYISGGELEKAEEM 384
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
EM EK + + TY +++ C G+ EA LLKE++++
Sbjct: 385 FKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRG 427
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 24/248 (9%)
Query: 122 ELFNWASKQ---PRFRHDASTYHIM---TRKLGAA-KMYQEMDDVVNQMLATPSFCGTEA 174
+L +W +Q F D TY+I+ +LG ++Y+ +D++V + +
Sbjct: 239 KLIDWVYEQMLEDGFSPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYT---- 294
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
YN +++ A K A+ + +M R + P + + L GK
Sbjct: 295 -YNILLHHLATGNKPLAALNLLTHM---REVGVEPGVIHFTTLVDGLSRAGK-------- 342
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E + +MV G PD+ MI GYI + A +F +M LPN F+Y+
Sbjct: 343 LEACKYFMDEMVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEM-TEKGQLPNVFTYN 401
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I G C G+ K A L EM+ +G P+ Y++LV+ L G+V E + + +M+EK
Sbjct: 402 SMIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYSTLVNNLRNAGKVLEAHEIVKDMVEK 461
Query: 355 QRPVDFIT 362
V I+
Sbjct: 462 GHYVHLIS 469
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +M+ DG + N +I + D + F + +NY P SY+ ++H L
Sbjct: 174 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIK-SKTFNYRPYKHSYNAILHSL 232
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ K + ++M GF P +YN ++ A G+ + + L EM++ D
Sbjct: 233 LGVKQYKLIDWVYEQMLEDGFSPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 292
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT-YTKLLDVL 404
TY +L + + A+ LL ++ + G +T L+D L
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLTHMREVGVEPGVIHFTTLVDGL 337
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 134/281 (47%), Gaps = 16/281 (5%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ + + V ++ F WA K+ F HD++TY + L A M EM + +M+ +
Sbjct: 97 VLKIDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCV 156
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
G L + I+ +A+ +++A+ +F +K + C+P+ +YN + + G
Sbjct: 157 IGPADL-SEIVKVLGKAKMVNKALSIFYQIKGRK---CKPTSNTYNSMILMLMQEG---- 208
Query: 230 INHVYMETIRCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL- 287
+ E + L+ +M N+G PD + +++I + + A+ +F +M N L
Sbjct: 209 ----HHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMK--ENGLH 262
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P + Y ++ GR + A L EMK KG + +Y L+ + G+VEE
Sbjct: 263 PTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSI 322
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
M+++ D + +++ + + GR +A+KL +E+++
Sbjct: 323 FMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMES 363
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 47/266 (17%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T +Y TI+ + + ++ +A+ + + MK C ++ +Y L GK
Sbjct: 264 TAKIYTTILGIYFKLGRVEKALGLVQEMKEKG---CALTVYTYTELIKGVGKAGK----- 315
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VV 283
+E +F M+ +G +PD+ +N++I + + DA+++F +M V
Sbjct: 316 ---VEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVT 372
Query: 284 YN---------------------------YLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
YN +P+SF+Y LI G C R + A L +EM
Sbjct: 373 YNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEM 432
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
KGF P +Y SL++AL E + E+ E Y ++ + + GR
Sbjct: 433 DEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRL 492
Query: 377 GEAMKLLKELQNKNL-IDGYTYTKLL 401
EA+ L E++ D Y Y L+
Sbjct: 493 SEAVDLFNEMKKLGCNPDVYAYNALM 518
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 134/341 (39%), Gaps = 91/341 (26%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVYVFK 197
TY + + +G A +E + ML C + L N +I +A +L+ A+ +F+
Sbjct: 302 TYTELIKGVGKAGKVEEAYSIFMNMLKEG--CKPDVVLINNLINLLGKAGRLADAIKLFE 359
Query: 198 YMKNSRNLECRPSIRSYNILFTAFL---SRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
M++ L+C P++ +YN + A +R ++ +++M +G+ P
Sbjct: 360 EMES---LQCTPNVVTYNTVIKALFESKARASEAFL----------WYEKMKENGVVPSS 406
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS-------------- 292
F+ + +I G+ +N V AL + +M Y L N+
Sbjct: 407 FTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQE 466
Query: 293 ------------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
Y +I L GR A +L +EMK+ G P +YN+L+S + G
Sbjct: 467 LRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGM 526
Query: 341 VEETVKNLWEMIE------------------------------------KQRPVDFITYR 364
+E L M E K +P D ++Y
Sbjct: 527 TDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKP-DVVSYN 585
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
TVL + R G EA KL+KE+ +K D TY+ +L+ +
Sbjct: 586 TVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAV 626
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVS----FNTLMNGYIKLGDLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVVLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + G PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G+++E + M D TY +++ +C+ + +A +L E+ + L+ +G
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGSCKEGD--------LETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G+VPS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 154/321 (47%), Gaps = 24/321 (7%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASK-QPRFRHDASTYHIMTRKLGAAKMY 153
+ P R + L +++T Q++ + L++F +A K P F H+ TYH + KL A+ +
Sbjct: 40 IKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAF 99
Query: 154 QEMDDVVNQMLAT--PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
++ ++ + + P CG E L+ ++ + A + ++ +F + + + S+
Sbjct: 100 DPVESLMADLRNSYPPIKCG-ENLFIDLLRNYGLAGRYESSMRIFLRIP---DFGVKRSV 155
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND-GIEPDIFSLNSMIKGYILSNHV 270
RS N L N I + + + +FK GI P+IF+ N ++K N +
Sbjct: 156 RSLNTLL--------NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 207
Query: 271 NDALRIFHQ---MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
A ++ + MG+V PN +Y ++ G A+G ++A+ + +EM +G+ P + +
Sbjct: 208 ESAYKVLDEIPSMGLV----PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATT 263
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y L+ G E + +M + + + +TY ++ +C+ ++GEA + E+
Sbjct: 264 YTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEML 323
Query: 388 NKNLI-DGYTYTKLLDVLEDD 407
++ + D K++D L +D
Sbjct: 324 ERSFMPDSSLCCKVIDALCED 344
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+K + ++ P++ +Y + +++RG ME+ + + ++M++ G PD
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGD--------MESAKRVLEEMLDRGWYPDA 261
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ ++ GY ++A + M PN +Y +I LC + ++ AR + D
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEK-NEIEPNEVTYGVMIRALCKEKKSGEARNMFD 320
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFITYRTVLDEICRR 373
EM + F+P S ++ AL + +V+E LW +M++ D T++ +C+
Sbjct: 321 EMLERSFMPDSSLCCKVIDALCEDHKVDEAC-GLWRKMLKNNCMPDNALLSTLIHWLCKE 379
Query: 374 GRAGEAMKLLKELQNKNLIDGYTYTKLL 401
GR EA KL E + ++ TY L+
Sbjct: 380 GRVTEARKLFDEFEKGSIPSLLTYNTLI 407
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++ + + + S A V M+ + E P+ +Y ++ A K+
Sbjct: 264 YTVLMDGYCKLGRFSEAATVMDDMEKN---EIEPNEVTYGVMIRALCKEKKSG------- 313
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
R +F +M+ PD +I + V++A ++ +M + N +P++
Sbjct: 314 -EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM-LKNNCMPDNALLST 371
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEK 354
LIH LC +GR AR+L DE + KG +PS +YN+L++ + GE+ E + LW +M E+
Sbjct: 372 LIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGR-LWDDMYER 429
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ + TY +++ + + G E +++L+E+
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM 461
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L+++M+ + PD L+++I V +A ++F + +P+ +Y+ LI G+
Sbjct: 353 LWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE--KGSIPSLLTYNTLIAGM 410
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A L D+M + P++ +YN L+ L+ NG V+E V+ L EM+E +
Sbjct: 411 CEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNK 470
Query: 361 ITYRTVLDEICRRGRAGEAMKLL 383
T+ + + + + G+ +AMK++
Sbjct: 471 TTFLILFEGLQKLGKEEDAMKIV 493
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PS+ S N+L + L G++ +R F +V G PD F+ N +++ + +
Sbjct: 120 PSLSSCNLLLESLLFVGRHA--------DVRAAFGLLVAAGARPDTFAWNKVVQACVAAG 171
Query: 269 HVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++ AL + +MG P ++FSY+ +I GL G+ +A ++ DEM G P+ +
Sbjct: 172 DLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRIT 231
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN+++ G++E + +M+ + +TY +L +CR GR E L+ E+
Sbjct: 232 YNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMA 291
Query: 388 NKNLI-DGYTYTKLLDVL 404
+ +++ DG+TY+ L D L
Sbjct: 292 SHSMLPDGFTYSILFDGL 309
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 18/235 (7%)
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
V +ML T +YNT+I + + R L A +F+ MK SR++ RP +YN L
Sbjct: 356 VFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMK-SRHI--RPDHITYNALIN 412
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
T + ME M G++P + + N++I Y + + +
Sbjct: 413 GLCKLEMVTKAEDLVME--------MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD 464
Query: 280 M---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
M G+ + + S+ ++ C G+ A + D+M K P+++ YNS++ A
Sbjct: 465 MQQKGIKSDVI----SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+G+ E+ + + +M +TY +L +CR + EA +L+ L+N+ L
Sbjct: 521 ESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 10/217 (4%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A L A+ + + M S P SYN++ GK + V
Sbjct: 160 WNKVVQACVAAGDLDVALAMLRRMGRSEGAP-PPDAFSYNVVIAGLWRSGKGSDALKV-- 216
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F +MV+ G+ P+ + N+MI G++ + R+ QM + PN +Y+
Sbjct: 217 ------FDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQM-LHDGPKPNVVTYNV 269
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC GR R L DEM +P +Y+ L L GE + + E ++K
Sbjct: 270 LLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKG 329
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ T +L+ +C+ G+ +A ++ + L + L+
Sbjct: 330 VMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLV 366
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F+ +V+ G+ P N++I GY + A IF QM + P+ +Y+ LI+GL
Sbjct: 356 VFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH-IRPDHITYNALINGL 414
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C A +L EM++ G PS +++N+L+ A G++E+ L +M +K D
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
I++ +V+ C+ G+ EA+ +L ++ K++ + Y ++D
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 517
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD FS N +I G S +DAL++F +M V PN +Y+ +I G G +
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEM-VDMGVAPNRITYNTMIDGHVKGGDLEAGFR 250
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L D+M G P+ +YN L+S L G ++ET + EM D TY + D +
Sbjct: 251 LRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLT 310
Query: 372 RRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLDVLEDD 407
R G + + L E L+ ++ YT + LL+ L D
Sbjct: 311 RTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKD 347
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 117/290 (40%), Gaps = 32/290 (11%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
K R D TY+ + L +M + +D+V +M + E +NT+I + A +
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVET-FNTLIDAYGTAGQ 454
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK---------------------- 226
L + V M+ + + S+ + AF GK
Sbjct: 455 LEKCFTVLSDMQQK---GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511
Query: 227 -----NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
+ YI E L ++M N G+ I + N ++KG S+ +++A + + +
Sbjct: 512 YNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL- 570
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
P+ SY+ +I C +G T A EL EM + G P+ ++ ++LVSALA G V
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRV 630
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ +M+ K Y ++D R + L KE+ K +
Sbjct: 631 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 123/283 (43%), Gaps = 30/283 (10%)
Query: 136 DASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
DA +Y+++ L A K++ EM D M P+ YNT+I +
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVD----MGVAPN----RITYNTMIDGHVKGGD 244
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L F+ + +P++ +YN+L + G+ M+ R L +M +
Sbjct: 245 LEAG---FRLRDQMLHDGPKPNVVTYNVLLSGLCRTGR--------MDETRALMDEMASH 293
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
+ PD F+ + + G + L +F + + + +++ L++GLC G+
Sbjct: 294 SMLPDGFTYSILFDGLTRTGESQTMLSLFAE-SLKKGVMLGAYTCSILLNGLCKDGKVAK 352
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A+++ + + G VP++ YN+L++ ++ +M + D ITY +++
Sbjct: 353 AKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 412
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNS 411
+C+ +A L+ E++ K+ +D T + L D +G +
Sbjct: 413 GLCKLEMVTKAEDLVMEME-KSGVDPSVET--FNTLIDAYGTA 452
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ A + A + M +C ++NIL F G +
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQK---DCPLDDVTFNILVDFFCQNG--------LV 372
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + L +QM++ G PD+ + ++I G+ +++A+ + M PN+ SY
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC-GCKPNTVSYTI 431
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC+ GR +A EL +M ++G P+ ++N+L++ L G VE+ ++ L +M+
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D I+Y TV+D + + G+ EA++LL + NK +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 142/333 (42%), Gaps = 48/333 (14%)
Query: 72 RGVGKRSK-ADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQ 130
RG+ R + AD+ LD+ F+ + +PP ++ V LE A +
Sbjct: 119 RGLCTRGRIADALEVLDEMSFK-GCAPIPPMYH---------------VILEA---ACRS 159
Query: 131 PRFRHDASTYHIMTRK------------LGAAKMYQEMDDVVNQMLATPSFCGTEA---L 175
FR+ M K L A +D+ V +L +F G EA
Sbjct: 160 GGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVG-LLRKLAFFGCEADIVS 218
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ A++ V + M ++C P+I ++N L +L R N ++
Sbjct: 219 YNAVLKGLCMAKRWGD---VEELMDEMVRVDCAPNIVTFNTLI-GYLCR------NGLF- 267
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + + QM G PDI ++I G H+ A I ++M Y PN Y+
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS-YGLKPNVVCYNT 326
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC+ R K A EL EM +K ++N LV NG V+ ++ L +M+
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
D ITY TV++ C+ G EA+ LLK + +
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 16/274 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D T++I+ + + +++ QML+ C + + Y T+I F + + AV
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLS--HGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ K M + C+P+ SY I+ S G+ L QM+ G P+
Sbjct: 413 LLKSMSSCG---CKPNTVSYTIVLKGLCSAGRWVDAEE--------LMSQMIQQGCPPNP 461
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N++I V A+ + QM +V P+ SY +I GL G+T+ A EL +
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQM-LVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 520
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M KG P++ Y+S+ AL+ G V + ++ + + D + Y V+ +C+R
Sbjct: 521 VMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRW 580
Query: 375 RAGEAMKLLKEL-QNKNLIDGYTYTKLLDVLEDD 407
A+ + N + + TYT L+ L +
Sbjct: 581 ETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASE 614
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +++ G E DI S N+++KG ++ D + +M V + PN +++ LI L
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTFNTLIGYL 261
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G + E+ +M G P + Y +++ + G +E + L M +
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ Y TVL +C R EA +LL E+ K+ +D T+ L+D
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + N+M+ GY + + A R+ + V PN++++ ++ GLC +GR +A E+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVP----PNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM KG P Y+ ++ A +G +V+ L M K +D VL+ IC +
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 374 GRAGEAMKLLKEL 386
G EA+ LL++L
Sbjct: 195 GCVDEAVGLLRKL 207
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 9/185 (4%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P Y+++ A G + ++R L + M G D + N ++
Sbjct: 142 CAPIPPMYHVILEAACRSGG-------FRNSVRVL-EAMHAKGCTLDTGNCNLVLNAICE 193
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V++A+ + ++ + + SY+ ++ GLC R + EL DEM R P+
Sbjct: 194 QGCVDEAVGLLRKLAF-FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++N+L+ L NG E + L +M E D Y T++D IC+ G A ++L +
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 387 QNKNL 391
+ L
Sbjct: 313 PSYGL 317
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FR DA+ Y+ + L A+ + ++++ M A + + Y T+I ++ L A
Sbjct: 6 FRLDAAIYNTLIAGLCKARKPRHALELLHVMAAN-GYDASVVTYTTLIDGLCKSGDLDAA 64
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M ++ C P++ +Y L + H ++T+ K+M+ G EP
Sbjct: 65 QALLQKMADA---GCAPNVVTYTALIDGLCKARRP----HDAIQTV----KRMLRSGCEP 113
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + NS+I G ++N ++DA + ++ + +P+ +Y+ I GLC G+ E+
Sbjct: 114 DLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEM 173
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+EM R G P ++ S++S L +++ + M+E+ D +TY +LD + R
Sbjct: 174 LEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSR 233
Query: 373 RGRAGEAMKLLKEL 386
R ++L+ +
Sbjct: 234 ANRLDTVEEVLEHM 247
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 134/313 (42%), Gaps = 48/313 (15%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAA-------KMYQEMD-- 157
LC + + LV EL + + P D TY+ L A +M +EMD
Sbjct: 125 LCMANRMDDAGLVLQELMIESGRIP----DVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180
Query: 158 ----DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
DVV +FC +II +A ++ A VFK M C P +
Sbjct: 181 GISPDVV-------TFC-------SIISGLCKANRIDDAFQVFKGMLER---GCVPDSLT 223
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+I+ LSR ++T+ + + MV G + +I I + + A
Sbjct: 224 YSIMLDN-LSRANR-------LDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESA 275
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
+ Q + + ++++ I LC G+ A+ + M G +P+ SYN ++
Sbjct: 276 SWAYEQ-AMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVID 334
Query: 334 ALALNGEVEETVKNLWEMIEKQ--RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
L +G V++ K +M++ +P D I + T++ C+ GR +A +LLKE++ KN+
Sbjct: 335 GLCKSGNVDDAWKLSRKMLDSGCCKP-DVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNI 393
Query: 392 I--DGYTYTKLLD 402
D TY ++D
Sbjct: 394 CVPDVVTYNTMID 406
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 116/285 (40%), Gaps = 51/285 (17%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
TY + L A+ + V +ML S C + + YN++I+ A ++ A V +
Sbjct: 82 TYTALIDGLCKARRPHDAIQTVKRMLR--SGCEPDLVTYNSLIHGLCMANRMDDAGLVLQ 139
Query: 198 -YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M S + P + +YN + GK ++ + ++M GI PD+ +
Sbjct: 140 ELMIESGRI---PDVVTYNTFISGLCKAGK--------LDKGLEMLEEMDRGGISPDVVT 188
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
S+I G +N ++DA ++F M + +P+S +Y ++ L R E+ + M
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGM-LERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHM 247
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEET-------------------------------- 344
+ G S +Y L+ AL G++E
Sbjct: 248 VKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKF 307
Query: 345 --VKN-LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
KN L MIE + ++Y V+D +C+ G +A KL +++
Sbjct: 308 PLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKM 352
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 130/272 (47%), Gaps = 16/272 (5%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA K+ F HD++TY + L A M EM + +M+ + G L +
Sbjct: 106 VKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADL-SE 164
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
I+ +A+ +++A+ +F +K + C+P+ +YN + + G + E +
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRK---CKPTSNTYNSMILMLMQEG--------HHEKV 213
Query: 239 RCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYL 296
L+ +M N+G PD + +++I + + A+ +F +M N L P + Y +
Sbjct: 214 HELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMK--ENGLHPTAKIYTTI 271
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ GR + A L EMK KG + +Y L+ + G+VEE M+++
Sbjct: 272 LGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGC 331
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
D + +++ + + GR +A+KL +E+++
Sbjct: 332 KPDVVLINNLINLLGKAGRLADAIKLFEEMES 363
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 125/323 (38%), Gaps = 62/323 (19%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLG-------AAKMYQEMDDVVNQMLATPSFCGTEA 174
EL+N + D TY + G A ++ EM + T
Sbjct: 215 ELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKE--------NGLHPTAK 266
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+Y TI+ + + ++ +A+ + + MK C ++ +Y L GK
Sbjct: 267 IYTTILGIYFKLGRVEKALGLVQEMKEKG---CALTVYTYTELIKGVGKAGK-------- 315
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYN- 285
+E +F M+ +G +PD+ +N++I + + DA+++F +M V YN
Sbjct: 316 VEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNT 375
Query: 286 --------------------------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
+P+SF+Y LI G C R + A L +EM K
Sbjct: 376 VIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEK 435
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
GF P +Y SL++AL E + E+ E Y ++ + + GR EA
Sbjct: 436 GFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEA 495
Query: 380 MKLLKELQNKNL-IDGYTYTKLL 401
+ L E++ D Y Y L+
Sbjct: 496 VDLFNEMKKLGCNPDVYAYNALM 518
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 134/341 (39%), Gaps = 91/341 (26%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVYVFK 197
TY + + +G A +E + ML C + L N +I +A +L+ A+ +F+
Sbjct: 302 TYTELIKGVGKAGKVEEAYSIFMNMLKEG--CKPDVVLINNLINLLGKAGRLADAIKLFE 359
Query: 198 YMKNSRNLECRPSIRSYNILFTAFL---SRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
M++ L+C P++ +YN + A +R ++ +++M +G+ P
Sbjct: 360 EMES---LQCTPNVVTYNTVIKALFESKARASEAFL----------WYEKMKENGVVPSS 406
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS-------------- 292
F+ + +I G+ +N V AL + +M Y L N+
Sbjct: 407 FTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQE 466
Query: 293 ------------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
Y +I L GR A +L +EMK+ G P +YN+L+S + G
Sbjct: 467 LRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGM 526
Query: 341 VEETVKNLWEMIE------------------------------------KQRPVDFITYR 364
+E L M E K +P D ++Y
Sbjct: 527 TDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKP-DVVSYN 585
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
TVL + R G EA KL+KE+ +K D TY+ +L+ +
Sbjct: 586 TVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAV 626
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 40/285 (14%)
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
A +++EM+ T + YN+++ +A K + + K M + E
Sbjct: 236 AAISLFKEME--------TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR---EI 284
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIR-----------------CL--------- 241
P++ ++N+L F+ GK N +Y E I C+
Sbjct: 285 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 344
Query: 242 -FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
MV + PDI + S+IKGY + V+D +++F + + N+ +Y L+ G
Sbjct: 345 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK-RGLVANAVTYSILVQGF 403
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G+ K A EL EM G +P +Y L+ L NG++E+ ++ ++ + + +
Sbjct: 404 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 463
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ Y T+++ +C+ G+ +A L L K + + TYT ++ L
Sbjct: 464 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 508
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ +F+ M SR L PS+ ++ F+A ++R K + KQ+ +GI
Sbjct: 62 AIALFQEMIRSRPL---PSLVDFSRFFSA-IARTKQ-------FNLVLDFCKQLELNGIA 110
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+I++LN MI + A + ++ + Y P++ +++ LI GL +G+ A
Sbjct: 111 HNIYTLNIMINCFCRCCKTCFAYSVLGKV-MKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 169
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L D M G P +YNS+V+ + +G+ + L +M E+ D TY T++D +C
Sbjct: 170 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 229
Query: 372 RRGRAGEAMKLLKELQNKNL 391
R G A+ L KE++ K +
Sbjct: 230 RDGCIDAAISLFKEMETKGI 249
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 10/213 (4%)
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+ + + + L P ++N L GK + E + L +MV +G
Sbjct: 128 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS-------EAV-VLVDRMVENGC 179
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+PD+ + NS++ G S + AL + +M N + F+Y +I LC G A
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAI 238
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
L EM+ KG S +YNSLV L G+ + L +M+ ++ + IT+ +LD
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 298
Query: 371 CRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
+ G+ EA +L KE+ + + TY L+D
Sbjct: 299 VKEGKLQEANELYKEMITRGISPNIITYNTLMD 331
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 106/240 (44%), Gaps = 33/240 (13%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR---SYNILFTAFLSRGKNTYINH 232
+ ++I + +++ + VF RN+ R + +Y+IL F GK
Sbjct: 361 FTSLIKGYCMVKRVDDGMKVF------RNISKRGLVANAVTYSILVQGFCQSGK------ 408
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-------GVVYN 285
++ LF++MV+ G+ PD+ + ++ G + + AL IF + G+V
Sbjct: 409 --IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM- 465
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
Y +I G+C G+ ++A L + KG P+ +Y ++S L G + E
Sbjct: 466 -------YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 518
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
L +M E + TY T++ R G + KL++E+++ D + ++D+L
Sbjct: 519 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 82/203 (40%), Gaps = 19/203 (9%)
Query: 136 DASTYHIMTRKL---GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+A TY I+ + G K+ +E+ Q + + Y ++ + KL +A
Sbjct: 392 NAVTYSILVQGFCQSGKIKLAEEL----FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 447
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F+ ++ S+ I Y + GK +E LF + G++P
Sbjct: 448 LEIFEDLQKSK---MDLGIVMYTTIIEGMCKGGK--------VEDAWNLFCSLPCKGVKP 496
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + MI G +++A + +M N PN +Y+ LI G + +L
Sbjct: 497 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNTLIRAHLRDGDLTASAKL 555
Query: 313 CDEMKRKGFVPSSKSYNSLVSAL 335
+EMK GF + S ++ L
Sbjct: 556 IEEMKSCGFSADASSIKMVIDML 578
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 135/297 (45%), Gaps = 13/297 (4%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
+ L P F++E + NV+ L+ F W + F H+ T+ + LG A
Sbjct: 3 IRNLVPSFDHELVYNVLHSSNTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
++ M E ++ +I + + + +V +F+ M+ L +I+SY
Sbjct: 63 HARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEE---LGVERTIKSY 118
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 119 NALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 171 RFFEDMKS-REISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKG 229
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 230 YVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 ---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALA 336
G+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+
Sbjct: 247 KGSGIK----PNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHC 302
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+G ++ L MI P + Y ++++ C+ G+ +A+KLL +L K++I
Sbjct: 303 KSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDII 358
>gi|147858028|emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
Length = 1051
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 144/305 (47%), Gaps = 43/305 (14%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
+DP L LFN +Q F+HD +Y + KL ++ ++ ++ +++ + C E
Sbjct: 392 QDPDDALSLFN-QYQQMGFKHDYPSYSALVYKLARSRNFEAVETLLDYLQNINIRC-RET 449
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKN--------------------------------S 202
L+ +I + +++ +A+ +F+ M + S
Sbjct: 450 LFIALIQHYGKSQMPEKAIELFQRMPSFNCHRTIVSFNTLLNVLVEIDRFLDAIGIFDRS 509
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
+ R + S+NI+ +L +G+ + +F++M++ ++P + + NS+I
Sbjct: 510 TKMGFRRNSISFNIIIKGWLGKGE--------WDKAWQVFEEMIDKEVKPTVVTFNSLIG 561
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
++ A+ + M + + PN+ +Y L+ GLC+ G+ K A+++ +M +G
Sbjct: 562 FLCGKGDLDGAMGLLZDM-IQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCK 620
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P ++ L+S L G +++ L EM ++ D +TY +++ +C+ GRA EA K+
Sbjct: 621 PRLLNFGVLMSDLGRRGRIDDXKTLLLEMKRRRFKPDVVTYNILINXLCKEGRAXEAYKV 680
Query: 383 LKELQ 387
L E+Q
Sbjct: 681 LVEMQ 685
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 131/289 (45%), Gaps = 22/289 (7%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRK-LGAA---KMYQEMDDVVNQ 162
L NV+ + L + +F+ ++K FR ++ +++I+ + LG K +Q ++++++
Sbjct: 489 LLNVLVEIDRFLDAIGIFDRSTKM-GFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDK 547
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
+ T +N++I F L A+ + + M R+ RP+ +Y +L
Sbjct: 548 EVKP-----TVVTFNSLIGFLCGKGDLDGAMGLLZDMIQKRH---RPNAVTYALLMEGLC 599
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV 282
S GK Y E + +F M G +P + + ++ ++D + +M
Sbjct: 600 SLGK-------YKEAKKMMF-DMDYQGCKPRLLNFGVLMSDLGRRGRIDDXKTLLLEMKR 651
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+ P+ +Y+ LI+ LC +GR A ++ EM+ G P++ +Y +V + E
Sbjct: 652 -RRFKPDVVTYNILINXLCKEGRAXEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDFE 710
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+K L M+ ++ ++ + + G+ A +L+E++ + +
Sbjct: 711 GGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKRKM 759
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I+ Y S A+ +F +M +N S++ L++ L R +A + D +
Sbjct: 453 ALIQHYGKSQMPEKAIELFQRM-PSFNCHRTIVSFNTLLNVLVEIDRFLDAIGIFDRSTK 511
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
GF +S S+N ++ GE ++ + EMI+K+ +T+ +++ +C +G
Sbjct: 512 MGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDG 571
Query: 379 AMKLLKEL-QNKNLIDGYTYTKLLDVL 404
AM LL+++ Q ++ + TY L++ L
Sbjct: 572 AMGLLZDMIQKRHRPNAVTYALLMEGL 598
>gi|255660916|gb|ACU25627.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 484
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F+ E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRNLVPSFDQELVYNVLHGAKTSEHALQFFRWVERSNLFEHNRDTHLKIIEILGRALKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + +A + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEE---LGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF + RG+ +M R F +M+++GIEP + N +I G+ LS V+ A
Sbjct: 118 YDALFKVIMRRGR-------FMMAKR-YFNKMLSEGIEPTRHTFNVLIWGFFLSGKVDTA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + A + EMK + P+ SY +L+
Sbjct: 170 NRFFEDMKS-REISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGRNIEPTVVSYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+V++ ++ + EM + ITY T+L +C G+ EA +LKE+ +K
Sbjct: 229 GYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCDAGKMSEAQSILKEMVDK 284
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 32/250 (12%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
PSF E +YN + A+ A+ F++++ S E R ++ L G
Sbjct: 7 VPSF-DQELVYNVL----HGAKTSEHALQFFRWVERSNLFEHN---RDTHLKIIEIL--G 56
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
+ +NH RC+ M G+E D MI Y + V +++++F +M GV
Sbjct: 57 RALKLNHA-----RCILLDMPKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEELGV 111
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
SYD L + +GR A+ ++M +G P+ ++N L+ L+G+V+
Sbjct: 112 ERTIK----SYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVD 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LI 392
+ +M ++ D +TY T+++ R + EA K E++ +N LI
Sbjct: 168 TANRFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGRNIEPTVVSYTTLI 227
Query: 393 DGYTYTKLLD 402
GY +D
Sbjct: 228 KGYVSVDQVD 237
>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 538
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 63/344 (18%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
++ +Q+D L+ E FNWA + H T+ I+ L + ++ + ++ +L
Sbjct: 88 LLKIQKDYLLSFEFFNWAKTRNPASHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGV 147
Query: 170 ----------------C-GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
C T +++++ FA +K A F MK+ L P++
Sbjct: 148 DLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFL---PTVE 204
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
S N ++ L +G+ Y E RC I P+ ++LN ++ GY S ++
Sbjct: 205 SCNAYMSSLLGQGRVDIALRFYREMRRC--------KISPNTYTLNMVMSGYCRSGKLDK 256
Query: 273 ALRIFHQMG--------VVYNYL--------------------------PNSFSYDYLIH 298
+ + M V YN L PN +++ LIH
Sbjct: 257 GIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIH 316
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G C + + A ++ EMK P++ +YN+L++ + G+ E + +M+
Sbjct: 317 GFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQR 376
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D +TY T++ +C++ + +A + +KEL +NL+ + T++ L+
Sbjct: 377 DILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I+ F A KL A VF MK L P+ +YN L + +G +
Sbjct: 311 FNTLIHGFCRAVKLQEASKVFGEMKA---LNLPPNTVTYNTLINGYSQQGDH-------- 359
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E ++ MV +GI+ DI + N++I G A + ++ N +PNS ++
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDK-ENLVPNSSTFSA 418
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C + EL M R G P+ +++N L+SA N + + + L EM+ +
Sbjct: 419 LIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMVRRS 478
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
P+D T V + + +G+ +LL+E++ K +
Sbjct: 479 IPLDSRTVHQVCNGLNHQGKDQLVKELLQEMEGKKFL 515
>gi|298204661|emb|CBI25159.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 61/330 (18%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFC---------- 170
L +F WA+ FRHD STY M + L + ++ ++ M++ P C
Sbjct: 192 LHIFTWAATIDSFRHDQSTYEWMVKTLAITDRFDDLHSLLQGMVSNP--CPYSDGIFSMI 249
Query: 171 ---GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
+ A+YN +I + R+ + + V++ M R +P + ++N L + S +N
Sbjct: 250 DGKPSVAMYNILINGYVNCREHEKVMTVYEKMIKDR---VKPDVFTFNSLIS---SCCRN 303
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------- 280
+ + +E +FK+M + G P++ S N++IKG + + + ++M
Sbjct: 304 SQFG-LALE----MFKEMKDKGCSPNVVSFNTLIKGSFRERKFEEGIGMAYEMLELGCEF 358
Query: 281 ---------------GVVY------------NYLPNSFSYDYLIHGLCAQGRTKNARELC 313
G V LPN F Y LI LC + A EL
Sbjct: 359 SNVTCEILVDGLCREGRVLEACDLLIDFSGKGALPNGFDYFCLIEALCGEENVDRALELL 418
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
D++ RKG PSS + + + L + EE + + +M+ + D +T +L ++C
Sbjct: 419 DQLWRKGNAPSSIACTAFIEGLRRFRKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEV 478
Query: 374 GRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
GR+ EA +L +K L DG T+ L++
Sbjct: 479 GRSFEANELRLLASSKGLDSDGMTFNILVN 508
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L Q+ G P + + I+G +A ++ +M + LP+S + + L+ L
Sbjct: 417 LLDQLWRKGNAPSSIACTAFIEGLRRFRKTEEAFQLMEKM-LREGILPDSVTCNCLLQDL 475
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C GR+ A EL KG ++N LV+ + G+ +E + L EM++ D
Sbjct: 476 CEVGRSFEANELRLLASSKGLDSDGMTFNILVNGYSREGKRKEGKRLLNEMLDLGFIPDL 535
Query: 361 ITYRTVLDEICRRGRA 376
+Y +++ + G +
Sbjct: 536 ASYNRLMNGLSNGGSS 551
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 121/258 (46%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 137 KDGDIRJAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLASG-- 190
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K N LF +M+ G+ P+ ++I G+
Sbjct: 191 -VQPDVYTYSVLINGXCKESKXDDANE--------LFDEMLVKGLVPNXVXFTTLIDGHC 241
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A L DEM KG P
Sbjct: 242 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDK 300
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C GR+ +A K+L+E
Sbjct: 301 ITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLRE 360
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 361 MLSVGLKPDARTYTMIIN 378
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++ G+++E
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 179
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ M+ D TY +++ C+ + +A +L E+ K L+ + +T L+D
Sbjct: 180 FRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLID 238
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ A + A + M +C ++NIL F G +
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQK---DCPLDDVTFNILVDFFCQNG--------LV 372
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + L +QM++ G PD+ + ++I G+ +++A+ + M PN+ SY
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC-GCKPNTVSYTI 431
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC+ GR +A EL +M ++G P+ ++N+L++ L G VE+ ++ L +M+
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D I+Y TV+D + + G+ EA++LL + NK +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 140/333 (42%), Gaps = 48/333 (14%)
Query: 72 RGVGKRSK-ADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQ 130
RG+ R + AD+ LD+ F+ + +PP ++ + A +
Sbjct: 119 RGLCTRGRIADALEVLDEMSFK-GCAPIPPMYH------------------VILEAACRS 159
Query: 131 PRFRHDASTYHIMTRK------------LGAAKMYQEMDDVVNQMLATPSFCGTEA---L 175
FR+ M K L A +D+ V +L +F G EA
Sbjct: 160 GGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVG-LLRKLAFFGCEADIVS 218
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ A++ V + M ++C P+I ++N L +L R N ++
Sbjct: 219 YNAVLKGLCMAKRWGD---VEELMDEMVRVDCAPNIVTFNTLI-GYLCR------NGLF- 267
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + + QM G PDI ++I G H+ A I ++M Y PN Y+
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS-YGLKPNVVCYNT 326
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC+ R K A EL EM +K ++N LV NG V+ ++ L +M+
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
D ITY TV++ C+ G EA+ LLK + +
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 16/274 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D T++I+ + + +++ QML+ C + + Y T+I F + + AV
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLS--HGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ K M + C+P+ SY I+ S G+ L QM+ G P+
Sbjct: 413 LLKSMSSCG---CKPNTVSYTIVLKGLCSAGRWVDAEE--------LMSQMIQQGCPPNP 461
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N++I V A+ + QM +V P+ SY +I GL G+T+ A EL +
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQM-LVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 520
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M KG P++ Y+S+ AL+ G V + ++ + + D + Y V+ +C+R
Sbjct: 521 VMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRW 580
Query: 375 RAGEAMKLLKEL-QNKNLIDGYTYTKLLDVLEDD 407
A+ + N + + TYT L+ L +
Sbjct: 581 ETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASE 614
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +++ G E DI S N+++KG ++ D + +M V + PN +++ LI L
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTFNTLIGYL 261
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G + E+ +M G P + Y +++ + G +E + L M +
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ Y TVL +C R EA +LL E+ K+ +D T+ L+D
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + N+M+ GY + + A R+ + V PN++++ ++ GLC +GR +A E+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVP----PNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM KG P Y+ ++ A +G +V+ L M K +D VL+ IC +
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 374 GRAGEAMKLLKEL 386
G EA+ LL++L
Sbjct: 195 GCVDEAVGLLRKL 207
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 12/213 (5%)
Query: 182 FFAEARKL---SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
FF R L R + + C P Y+++ A G + ++
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGG-------FRNSV 166
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
R + + M G D + N ++ V++A+ + ++ + + SY+ ++
Sbjct: 167 R-VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVLK 224
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC R + EL DEM R P+ ++N+L+ L NG E + L +M E
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D Y T++D IC+ G A ++L + + L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ A + A + M +C ++NIL F G +
Sbjct: 324 YNTVLKGLCSAERWKEAEELLSEMFQK---DCPLDDVTFNILVDFFCQNG--------LV 372
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + L +QM++ G PD+ + ++I G+ +++A+ + M PN+ SY
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC-GCKPNTVSYTI 431
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC+ GR +A EL +M ++G P+ ++N+L++ L G VE+ ++ L +M+
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D I+Y TV+D + + G+ EA++LL + NK +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGI 527
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 140/333 (42%), Gaps = 48/333 (14%)
Query: 72 RGVGKRSK-ADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQ 130
RG+ R + AD+ LD+ F+ + +PP ++ + A +
Sbjct: 119 RGLCTRGRIADALEVLDEMSFK-GCAPIPPMYH------------------VILEAACRS 159
Query: 131 PRFRHDASTYHIMTRK------------LGAAKMYQEMDDVVNQMLATPSFCGTEA---L 175
FR+ M K L A +D+ V +L +F G EA
Sbjct: 160 GGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVG-LLRKLAFFGCEADIVS 218
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ A++ V + M ++C P+I ++N L +L R N ++
Sbjct: 219 YNAVLKGLCMAKRWGD---VEELMDEMVRVDCAPNIVTFNTLI-GYLCR------NGLF- 267
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + + QM G PDI ++I G H+ A I ++M Y PN Y+
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS-YGLKPNVVCYNT 326
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC+ R K A EL EM +K ++N LV NG V+ ++ L +M+
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
D ITY TV++ C+ G EA+ LLK + +
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSS 419
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 16/274 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D T++I+ + + +++ QML+ C + + Y T+I F + + AV
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLS--HGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ K M + C+P+ SY I+ S G+ L QM+ G P+
Sbjct: 413 LLKSMSSCG---CKPNTVSYTIVLKGLCSAGRWVDAEE--------LMSQMIQQGCPPNP 461
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N++I V A+ + QM +V P+ SY +I GL G+T+ A EL +
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQM-LVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 520
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M KG P++ Y+S+ AL+ G V + ++ + + D + Y V+ +C+R
Sbjct: 521 VMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRW 580
Query: 375 RAGEAMKLLKEL-QNKNLIDGYTYTKLLDVLEDD 407
A+ + N + + TYT L+ L +
Sbjct: 581 ETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASE 614
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +++ G E DI S N+++KG ++ D + +M V + PN +++ LI L
Sbjct: 203 LLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTFNTLIGYL 261
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G + E+ +M G P + Y +++ + G +E + L M +
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ Y TVL +C R EA +LL E+ K+ +D T+ L+D
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + N+M+ GY + + A R+ + V PN++++ ++ GLC +GR +A E+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVP----PNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM KG P Y+ ++ A +G +V+ L M K +D VL+ IC +
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 374 GRAGEAMKLLKEL 386
G EA+ LL++L
Sbjct: 195 GCVDEAVGLLRKL 207
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 12/213 (5%)
Query: 182 FFAEARKL---SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
FF R L R + + C P Y+++ A G + ++
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGG-------FRNSV 166
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
R + + M G D + N ++ V++A+ + ++ + + SY+ ++
Sbjct: 167 R-VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVLK 224
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC R + EL DEM R P+ ++N+L+ L NG E + L +M E
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D Y T++D IC+ G A ++L + + L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 12/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ F +A++L+ A +F+ MK + +CRP++ +Y++L + G+ +
Sbjct: 152 YNTLVNGFCKAKRLAEARVLFEAMK--KGGDCRPNLVTYSVLIDCYCKSGE--------V 201
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L ++M +G++ D+F +S+I + + +F +M + PN +Y
Sbjct: 202 GEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEM-LRRKVSPNVVTYSC 260
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GL GR + A E+ +M +G P +Y L L NG + +K L M++K
Sbjct: 261 LMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKG 320
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
+TY V++ +C+ R +A +++ + K D TY LL L
Sbjct: 321 EEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGL 370
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 20/242 (8%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECR-PSIRSYNILFTAFLSRGKNTYINHVYM 235
N ++ F + + +A+ +F MK RN +C P +YN L F + +
Sbjct: 116 NLVLKGFCRSGQCDKAMSLFSQMK--RNYDCVVPDCVTYNTLVNGFCKAKR--------L 165
Query: 236 ETIRCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
R LF+ M G P++ + + +I Y S V + L + +M + F Y
Sbjct: 166 AEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMER-EGLKADVFVYS 224
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI C +G + REL DEM R+ P+ +Y+ L+ L G E + L +M +
Sbjct: 225 SLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTAR 284
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL------DVLEDD 407
D + Y + D +C+ GRAG+A+K+L + K G TY ++ D ++D
Sbjct: 285 GVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDA 344
Query: 408 FG 409
FG
Sbjct: 345 FG 346
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 131/290 (45%), Gaps = 20/290 (6%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV--VNQMLATPSFCGTE 173
D + L+L ++P TY+++ L MDD V +M+
Sbjct: 308 DAIKVLDLMVQKGEEP----GTLTYNVVVNGLCKE---DRMDDAFGVVEMMVKKGKKPDA 360
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
YNT++ A K+ A+ ++K + S +P + + N L G+ +
Sbjct: 361 VTYNTLLKGLCGAGKIHEAMDLWKLLL-SEKFHVKPDVFTCNNLIQGLCKEGRVHDAARI 419
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ MV G++ +I + N +I+GY+ + + +AL+++ + V + PNS +Y
Sbjct: 420 H--------SSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLW-KYAVESGFSPNSMTY 470
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+I+GLC AR L +MK G P+ YN+L+++L +E+ EM
Sbjct: 471 SVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRN 530
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
VD +++ ++D + G A +LL E+ +L+ D T++ L++
Sbjct: 531 VNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILIN 580
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 120/293 (40%), Gaps = 28/293 (9%)
Query: 113 LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT------ 166
++ D C L K+ R HDA+ H ++G + ++ LA
Sbjct: 393 VKPDVFTCNNLIQGLCKEGRV-HDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEA 451
Query: 167 ---------PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
F Y+ +I + + LS A +F MK+S RP++ YN L
Sbjct: 452 LKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSG---IRPTVIDYNAL 508
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
T+ +E R LF++M N D+ S N +I G + + V A +
Sbjct: 509 MTSLCREDS--------LEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELL 560
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+M + + +P++ ++ LI+ G A L ++M G VP ++SL+ L
Sbjct: 561 SEM-FMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGL 619
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
GE E+ + L +M +K +D T+L +C R + K+L + ++
Sbjct: 620 KGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQQS 672
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
P+ +E +T+I +AR+ V V+ M ++ L P S + L +F++
Sbjct: 36 PTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVL---PRFTSLSALTESFVNTHH 92
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN- 285
++ V M G ++++LN ++KG+ S + A+ +F QM Y+
Sbjct: 93 PSFAFSV--------LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDC 144
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV-PSSKSYNSLVSALALNGEVEET 344
+P+ +Y+ L++G C R AR L + MK+ G P+ +Y+ L+ +GEV E
Sbjct: 145 VVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEG 204
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ L EM + D Y +++ C G +L E+
Sbjct: 205 LGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEM 246
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 123/283 (43%), Gaps = 21/283 (7%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKL-GAAKMYQEMDDVVNQMLATPSFCGTE 173
+D +E+ K+P DA TY+ + + L GA K+++ MD + ++L + F
Sbjct: 342 DDAFGVVEMMVKKGKKP----DAVTYNTLLKGLCGAGKIHEAMD--LWKLLLSEKFHVKP 395
Query: 174 ALY--NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
++ N +I + ++ A + M + + +I +YN L +L+ K
Sbjct: 396 DVFTCNNLIQGLCKEGRVHDAARIHSSMVE---MGLQGNIVTYNFLIEGYLAARK----- 447
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+E ++ L+K V G P+ + + MI G ++ A +F +M P
Sbjct: 448 --LIEALK-LWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKD-SGIRPTVI 503
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
Y+ L+ LC + + AR L EM+ S+N ++ G+V+ + L EM
Sbjct: 504 DYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEM 563
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
D +T+ +++ + G EAM L +++ + + G
Sbjct: 564 FMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPG 606
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 136/294 (46%), Gaps = 45/294 (15%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY-FFAEARKLSRAVYVFKYMKNSRN 204
KL A Y+E D+V + +A T A YN +++ F +AR S A V + M+ +
Sbjct: 234 KLDVALQYRE--DMVQRGIAM-----TVATYNLLMHALFMDARA-SDAYAVLEEMQKN-- 283
Query: 205 LECRPSIRSYNILFTAFLSRGKN--------------------TYINHVYM--------E 236
P + +YNIL + G TY + +Y+ E
Sbjct: 284 -GFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQE 342
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T R LF V GI PD+ N++I + + A I +M P+ +Y+ L
Sbjct: 343 TDR-LFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEK-KRIPPDDMTYNTL 400
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ G C GR AR L DEM ++G P SYN+L+S ++ G++++ ++ EM++K
Sbjct: 401 MRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGF 460
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL--EDD 407
+TY ++ +C+ + +A L+KE+ K + D TY L++ L ED+
Sbjct: 461 NPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 17/286 (5%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY 176
P+ LEL + PR +A TY+ + A Q +V+ +M + Y
Sbjct: 132 PVRALELLR---QMPR--PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTY 186
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
T+I + + ++ AV VF M E PS YN L + GK ++
Sbjct: 187 ATLISGWCKIGRMEDAVKVFDEMLTKG--EVAPSAVMYNALIGGYCDVGK--------LD 236
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ MV GI + + N ++ + +DA + +M + P+ F+Y+ L
Sbjct: 237 VALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQ-KNGFSPDVFTYNIL 295
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I+G C +G K A E+ +EM +KG ++ +Y SL+ + G+V+ET + ++K
Sbjct: 296 INGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGI 355
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D + Y +++ C G A +++ E++ K + D TY L+
Sbjct: 356 RPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLM 401
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 122/267 (45%), Gaps = 20/267 (7%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
++ H + L +A + D+ L C T +N ++ K RA+ + +
Sbjct: 86 ASLHPLLSSLPSAPAFALFADIYRLRL---PLCTTT--FNIMLRHLCATGKPVRALELLR 140
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
M RP+ +YN + F +RG+ +E +R + ++ GI PD ++
Sbjct: 141 QMP-------RPNAVTYNTVIAGFCARGRV----QAALEVMREMRER---GGIAPDKYTY 186
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
++I G+ + DA+++F +M P++ Y+ LI G C G+ A + ++M
Sbjct: 187 ATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMV 246
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
++G + +YN L+ AL ++ + L EM + D TY +++ C+ G
Sbjct: 247 QRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEK 306
Query: 378 EAMKLLKELQNKNL-IDGYTYTKLLDV 403
+A+++ +E+ K + TYT L+ V
Sbjct: 307 KALEVFEEMSQKGVRATAVTYTSLIYV 333
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 92/221 (41%), Gaps = 14/221 (6%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI 179
LE+F S Q R A TY + QE D + N + +YN +
Sbjct: 308 ALEVFEEMS-QKGVRATAVTYTSLIYVFSRKGQVQETDRLFN-VAVKKGIRPDVVMYNAL 365
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
I + RA + M+ R P +YN L F G+ ++ R
Sbjct: 366 INSHCTGGDMERAYEIMAEMEKKR---IPPDDMTYNTLMRGFCLLGR--------LDEAR 414
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
L +M GI+PD+ S N++I GY + + DALR+ +M + + P +Y+ LI G
Sbjct: 415 TLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEM-MDKGFNPTLMTYNALIQG 473
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
LC + +A L EM KG P +Y SL+ L E
Sbjct: 474 LCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L+ + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVS----FNTLMNGYIKLGDLNEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANVLFDEMLDKGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 FTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + G PS S+N+L++
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G++ E + M D TY +++ +C+ + +A L E+ +K L+ +G
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 104/196 (53%), Gaps = 10/196 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+ +
Sbjct: 203 QPDVYTYSVLINGLCKESK--------MDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKN 254
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A +L DEM KG P +
Sbjct: 255 RRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 313
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L+ G++E ++ MI++ +D + Y ++ +C+ GR +A K+L+E+
Sbjct: 314 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREML 373
Query: 388 NKNL-IDGYTYTKLLD 402
+ L D TYT +++
Sbjct: 374 SVGLKPDTGTYTMIIN 389
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 94/230 (40%), Gaps = 58/230 (25%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K L+C S+ +NIL F G +
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGD--------I 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI---FHQMGVVYNYLPNSFS 292
+ +F + G+ P + S N+++ GYI +++ R+ H GV P+ ++
Sbjct: 153 RVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQ----PDVYT 208
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+GLC + + +A L DEM KG VP NG
Sbjct: 209 YSVLINGLCKESKMDDANGLFDEMLDKGLVP--------------NG------------- 241
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+T+ T++ C+ R AM++ K++ +++L D TY L+
Sbjct: 242 --------VTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLS-QSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGCCKEGD--------LETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVL 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+M V P++ +Y +I+ C +G +L EM+R G VPS S
Sbjct: 370 REMLSV-GLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 18/297 (6%)
Query: 111 MTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV--VNQMLATPS 168
M LQ+ P + L+ F WA KQ ++ H+ Y + + ++D+V V
Sbjct: 71 MELQKRPDLALKFFTWAGKQKKYTHNLQCY---VSSIDVLAINGDLDNVKSVFCKFRGMG 127
Query: 169 FCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
F + N++I F + ++V++ MK + PS+ +YN L N
Sbjct: 128 FLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENG---VEPSLFTYNFLL--------NG 176
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
+N V++E+ + + M N I PD+ + N+MIKGY A F M + N P
Sbjct: 177 LVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMEL-RNVAP 235
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ +Y LI A+G L EM G +Y+ ++ L G+ E
Sbjct: 236 DKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVF 295
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+MI+K V+ Y ++D + G GEAM L + ++ + L D TY +++ +
Sbjct: 296 EKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCM 352
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 115/288 (39%), Gaps = 55/288 (19%)
Query: 152 MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
+Y EMD+ N + P Y+ +I + K VF+ M C+ ++
Sbjct: 259 LYHEMDE--NGLEIPPH------AYSLVIGGLCKEGKCVEGYAVFEKMIQKG---CKVNV 307
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
Y L + G M LF++M +G+EPD+ + ++ S ++
Sbjct: 308 AIYTALIDSNAKCGN--------MGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLD 359
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
+A+ + + V N+ Y LI GL GR A +L +EM +KG P S YN+L
Sbjct: 360 EAME-YLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNAL 418
Query: 332 VSALALNGEVEETV-----------------------------KN-----LWE-MIEKQR 356
+ ALA G+ +E + KN +W+ MI+K
Sbjct: 419 IDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGI 478
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
+R + +C G+ A KLL EL +I + +L+VL
Sbjct: 479 TPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPETAFEDMLNVL 526
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 141/334 (42%), Gaps = 55/334 (16%)
Query: 97 ELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGA------- 149
ELP + L ++ ++ PL L +F+ A ++P F ++ +H + R++ A
Sbjct: 3 ELPKSLSPHRLLKLLKAEKSPLSALNVFDAAVRRPGFSPSSAVFHHILRRVAADPGLLLA 62
Query: 150 ---------------------------AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
+M E V M T +NT++
Sbjct: 63 HAPRIIAAIHCPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNA 122
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
F E+ + +RA FKY + +R P++ +YN+L +G+ E R L
Sbjct: 123 FVESHQWARAENFFKYFEAAR---VSPNVETYNVLMKVMCKKGE--------FEKGRGLL 171
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHG 299
M G+ PD + ++I G S + AL +F +M GV P+ Y+ +I G
Sbjct: 172 TWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVE----PDVVCYNMIIDG 227
Query: 300 LCAQGRTKNARELCDEMKRKGFV-PSSKSYNSLVSALALNGEVEETVKNLWEMIEK-QRP 357
+G A E+ + + R+ V PS SYN ++S L G E ++ +WE ++K +R
Sbjct: 228 FFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLE-IWERMKKNERK 286
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D TY ++ + G G A K+ +E+ + +
Sbjct: 287 CDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGV 320
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +I F + KL AV VF+ M C ++ SYNIL L + + E
Sbjct: 465 NVLIDGFVKHSKLDSAVKVFREMSGKG---CSLTVVSYNILINGLLRAER-------FRE 514
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
C+ +M+ G +PDI + +++I G SN ++ ALR++HQ + + P+ Y+ +
Sbjct: 515 AYDCV-NEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQF-LDTGHKPDIIMYNIV 572
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
IH LC+ G+ ++A +L +++K V + ++N+++ G E K ++E +
Sbjct: 573 IHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNTIMEGFYKVGNCEMASKIWAHILEDEL 631
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKL 400
D I+Y L +C GR +A+ L + L+ G+ T +
Sbjct: 632 QPDIISYNITLKGLCSCGRVTDAVGFL----DDALVRGFLPTAI 671
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 38/267 (14%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A +M++ + + + L PS YN +I + + S + +++ MK + E +
Sbjct: 237 AGEMWERL---LREELVFPSVVS----YNVMISGLCKCGRFSEGLEIWERMKKN---ERK 286
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ +Y+ L G + R ++++MV G+ PD+ + N+M+ G +
Sbjct: 287 CDLFTYSALIHGLSEAGD--------LGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAG 338
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+V + ++ +MG L N SY+ + GL G+ +A L D + S +Y
Sbjct: 339 NVEECFELWEEMGKC--SLRNVRSYNIFLKGLFENGKVDDAMMLWDGL----LEADSATY 392
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQ--RPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+V L NG V ++ L E ++ VD Y ++++ +C+ GR EA ++ EL
Sbjct: 393 GVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVV-EL 451
Query: 387 QNKN-----------LIDGYTYTKLLD 402
NK LIDG+ LD
Sbjct: 452 MNKRGCKFNSHVCNVLIDGFVKHSKLD 478
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N +I G++ + ++ A+++F +M L SY+ LI+GL R + A + +EM
Sbjct: 465 NVLIDGFVKHSKLDSAVKVFREMSGKGCSL-TVVSYNILINGLLRAERFREAYDCVNEML 523
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG+ P +Y++L+ L + ++ ++ + ++ D I Y V+ +C G+
Sbjct: 524 EKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVE 583
Query: 378 EAMKLLKELQNKNLIDGYTYTKLLD 402
+A++L L+ K ++ T+ +++
Sbjct: 584 DALQLYSTLRQKKCVNLVTHNTIME 608
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 120/293 (40%), Gaps = 34/293 (11%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
+Y++M L + E ++ +M C Y+ +I+ +EA L A V++
Sbjct: 256 SYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFT-YSALIHGLSEAGDLGGARKVYEE 314
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC--------------LFK- 243
M RP + + N + G ++ E +C LF+
Sbjct: 315 MVGRG---VRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFEN 371
Query: 244 ------QMVNDGI-EPDIFSLNSMIKGYILSNHVNDALRIF----HQMGVVYNYLPNSFS 292
M+ DG+ E D + ++ G + +VN AL++ H+ G + F+
Sbjct: 372 GKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREG---GMDVDEFA 428
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+ LC +GR A + + M ++G +S N L+ + +++ VK EM
Sbjct: 429 YSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMS 488
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
K + ++Y +++ + R R EA + E+ K D TY+ L+ L
Sbjct: 489 GKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGL 541
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 98/197 (49%), Gaps = 14/197 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
+Y+I+ L A+ ++E D VN+ML + Y+T+I E+ + A+ ++
Sbjct: 498 SYNILINGLLRAERFREAYDCVNEMLEK-GWKPDIITYSTLIGGLYESNMMDAALRLWHQ 556
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
++ + +P I YNI+ S GK +Y T+R K+ VN + + N
Sbjct: 557 FLDTGH---KPDIIMYNIVIHRLCSSGKVEDALQLY-STLR--QKKCVN------LVTHN 604
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++++G+ + A +I+ + + P+ SY+ + GLC+ GR +A D+
Sbjct: 605 TIMEGFYKVGNCEMASKIWAHI-LEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALV 663
Query: 319 KGFVPSSKSYNSLVSAL 335
+GF+P++ ++N LV A+
Sbjct: 664 RGFLPTAITWNILVRAV 680
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+++K Y + N+AL +F M V+ P S++ L++ + A +
Sbjct: 82 TLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
P+ ++YN L+ + GE E+ L M D ITY T++ + + G G
Sbjct: 142 ARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGF 201
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLD 402
A+++ E++ + + D Y ++D
Sbjct: 202 ALEVFDEMRERGVEPDVVCYNMIID 226
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PS+ S N+L + L G++ +R F +V G PD F+ N +++ + +
Sbjct: 120 PSLSSCNLLLESLLFVGRHA--------DVRAAFGLLVAAGARPDTFAWNKVVQACVAAG 171
Query: 269 HVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++ AL + +MG P ++FSY+ +I GL G+ +A ++ DEM G VP+ +
Sbjct: 172 DLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWIT 231
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN+++ G++E + +M+ + +TY +L +CR GR E L+ E+
Sbjct: 232 YNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMA 291
Query: 388 NKNLI-DGYTYTKLLDVL 404
+ ++ DG+TY+ L D L
Sbjct: 292 SHSMFPDGFTYSILFDGL 309
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 116/260 (44%), Gaps = 43/260 (16%)
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE------------- 206
V +ML T +YNT+I + + R L A +F+ MK SR++
Sbjct: 356 VLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMK-SRHIRPDHITYNALINGL 414
Query: 207 CR--------------------PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
C+ PS+ ++N L A+ + G+ +E + M
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQ--------LEKCFTVLSDMQ 466
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
GI+ D+ S S++K + + + +A+ I M + + PN+ Y+ +I G T
Sbjct: 467 QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDM-IYKDVAPNAQVYNSIIDAYIESGDT 525
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
+ A L ++MK G S +YN L+ L + +++E + ++ + + D ++Y T+
Sbjct: 526 EQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTI 585
Query: 367 LDEICRRGRAGEAMKLLKEL 386
+ C +G +A++LL+E+
Sbjct: 586 ISACCNKGDTDKALELLQEM 605
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 10/217 (4%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A L A+ + + M S P SYN++ GK + V
Sbjct: 160 WNKVVQACVAAGDLDVALAMVRRMGRSEGAP-PPDAFSYNVVIAGLWRSGKGSDALKV-- 216
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F +MV+ G+ P+ + N+MI G++ + R+ QM + PN +Y+
Sbjct: 217 ------FDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQM-LHDGPKPNIVTYNV 269
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC GR R L DEM P +Y+ L L GE + E ++K
Sbjct: 270 LLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKG 329
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ T +L+ +C+ G+ +A ++L+ L + L+
Sbjct: 330 VMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 366
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ + +V+ G+ P N++I GY + A IF QM + P+ +Y+ LI+GL
Sbjct: 356 VLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH-IRPDHITYNALINGL 414
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C A +L EM++ G PS +++N+L+ A G++E+ L +M +K D
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
I++ +V+ C+ G+ EA+ +L ++ K++ + Y ++D
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIID 517
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 118/290 (40%), Gaps = 32/290 (11%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
K R D TY+ + L +M + +D+V +M + E +NT+I + A +
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVET-FNTLIDAYGTAGQ 454
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK---------------------- 226
L + V M+ + + S+ + AF GK
Sbjct: 455 LEKCFTVLSDMQQK---GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511
Query: 227 -----NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
+ YI E L ++M N G+ I + N ++KG S+ +++A + + +
Sbjct: 512 YNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL- 570
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
P+ SY+ +I C +G T A EL EM + G P+ ++Y++LVSALA G V
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRV 630
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ +M+ K Y ++D R + L KE+ K +
Sbjct: 631 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD FS N +I G S +DAL++F +M V +PN +Y+ +I G G +
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEM-VDMGVVPNWITYNTMIDGHVKGGDLEAGFR 250
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L D+M G P+ +YN L+S L G ++ET + EM D TY + D +
Sbjct: 251 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 310
Query: 372 RRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLDVLEDD 407
R G + + L E L+ ++ YT + LL+ L D
Sbjct: 311 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKD 347
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 107/230 (46%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + K S A+ VF M + + P+ +YN + + G +
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVD---MGVVPNWITYNTMIDGHVKGGD--------L 245
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L QM++DG +P+I + N ++ G + +++ + +M ++ P+ F+Y
Sbjct: 246 EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMAS-HSMFPDGFTYSI 304
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L GL G ++ L E +KG + + + + L++ L +G+V + + L ++
Sbjct: 305 LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 364
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ Y T+++ C+ A + ++++++++ D TY L++ L
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414
>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 481
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 13/298 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YNXLFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 229 GYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMING 194
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
+ K ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 195 YYRVKK--------MEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 129/266 (48%), Gaps = 20/266 (7%)
Query: 140 YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYM 199
Y+ + L K+ + ++ +QM+A ++ +IY F +L A +F+ M
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIA-KKISPDVVTFSALIYGFCIVGQLEEAFGLFREM 269
Query: 200 KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNS 259
+N+ P ++NIL A G ++ + + M+ +G+ P++ + +S
Sbjct: 270 V-LKNI--NPDYYTFNILVDALCKEGN--------LKGAKNMLVVMMKEGVMPNVVTYSS 318
Query: 260 MIKGYILSNHVNDA---LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
++ GY L N VN A L QMG PN+ SY +I+G C A L ++M
Sbjct: 319 LMDGYCLVNQVNKAKHVLNTISQMGAA----PNAHSYCTMINGFCKIKMVDEALSLFNDM 374
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
+ KG P +YNSL+ L +G + + + EM + +P + TY ++D +C+
Sbjct: 375 QFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHV 434
Query: 377 GEAMKLLKELQNKNL-IDGYTYTKLL 401
+A+ L+K+++++ + D YT+ L+
Sbjct: 435 DQAIALVKKIKDQGIQPDMYTFNILI 460
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 202 SRNLE---CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
SR LE P I ++NIL N Y + M + +++ G EPD + N
Sbjct: 91 SRRLEFHGITPDIFTFNILI--------NCYCHMAEMNFAFSMMAKILKMGYEPDTITFN 142
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++IKG L+ V +AL FH + + + FSY LI+GLC G T+ A ++ ++
Sbjct: 143 TLIKGLCLNGKVKEALH-FHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDG 201
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
K + YN+++ +L + V + + +MI K+ D +T+ ++ C G+ E
Sbjct: 202 KLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEE 261
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLDVL 404
A L +E+ KN+ D YT+ L+D L
Sbjct: 262 AFGLFREMVLKNINPDYYTFNILVDAL 288
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 119/241 (49%), Gaps = 28/241 (11%)
Query: 158 DVVNQMLATP---SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
+ ++QM A P S+C T+I F + + + A+ +F M+ P +Y
Sbjct: 337 NTISQMGAAPNAHSYC-------TMINGFCKIKMVDEALSLFNDMQFKG---IAPDKVTY 386
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N L G+ +Y L +M ++G +IF+ N +I ++HV+ A+
Sbjct: 387 NSLIDGLCKSGRISYAWE--------LVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAI 438
Query: 275 RIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
+ ++ G+ P+ ++++ LI+GLC GR KNA+++ ++ KG+ ++ +YN +
Sbjct: 439 ALVKKIKDQGIQ----PDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIM 494
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
V+ L G +E L +M + D +TY T++ + + +A KLL+E+ +++
Sbjct: 495 VNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDV 554
Query: 392 I 392
+
Sbjct: 555 V 555
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 205 LECRP--SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
L +P SI +N + + + N Y T L +++ GI PDIF+ N +I
Sbjct: 58 LRTKPTSSIIEFNKILGSLVKSNNNHY------PTAISLSRRLEFHGITPDIFTFNILIN 111
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
Y +N A + ++ + Y P++ +++ LI GLC G+ K A D + GF
Sbjct: 112 CYCHMAEMNFAFSMMAKI-LKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFH 170
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
SY +L++ L GE ++ L ++ K ++ + Y T++D +C+ +A +L
Sbjct: 171 LDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYEL 230
Query: 383 LKELQNKNL-IDGYTYTKLL------DVLEDDFG 409
++ K + D T++ L+ LE+ FG
Sbjct: 231 YSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFG 264
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 145/340 (42%), Gaps = 55/340 (16%)
Query: 83 KPALDDTQFRCAVSELPPRFNNEELC--------NVMTLQEDPLVCLELFNWASKQPRFR 134
KP T F A + P + N+ +C V+ + D + LE F S F+
Sbjct: 12 KPRKSPTPFVLATNPNPEKANSLNVCPVSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFK 71
Query: 135 HDASTYHIMTRKLGAAKMYQEMDDV---VNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
H TY M KLG EMD V + QM C E L+ +I + + +
Sbjct: 72 HTHLTYETMIDKLGRN---NEMDGVSYLLQQMKLENVPCSQE-LFQFVIKCYRRSNLGEQ 127
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
+ +F + R C PS++ YN++ A LS+ + I L+ M ++G+E
Sbjct: 128 GLKMFYRI---REFGCEPSVKIYNLVLDALLSQN--------LFKMINALYNNMKSEGLE 176
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMG-----------------------------V 282
P++F+ N ++K + V+ A ++ +M +
Sbjct: 177 PNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL 236
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+ P Y+ LIHG+C + R K A +L +EM +G P+ SY++++S L+ G VE
Sbjct: 237 AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVE 296
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
++ M + + T+ +++ RGR G+A+ L
Sbjct: 297 LSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGL 336
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 13/251 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+ Y+ + L + E V NQM S Y+TIIY FA++ L A
Sbjct: 348 NVVAYNTLIHGLCSDGNMDEAISVWNQM-EKDSIRPNVTTYSTIIYGFAKSGDLVSACET 406
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M N CRP++ Y + + L M++DG P +
Sbjct: 407 WNKMINCG---CRPNVVVYTCMVDVLCQMS--------MFDQAFDLIDNMISDGCPPTVI 455
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N+ IKG + V A+ + QM Y LPN +Y+ L+ GL + A L E
Sbjct: 456 TFNNFIKGLCRAGRVEWAMNVLDQMEK-YECLPNIRTYNELLDGLFRANAFREACGLIRE 514
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
++ + +YN+++ + NG ++ ++ L +M+ +D IT T ++ C+ G+
Sbjct: 515 LEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGK 574
Query: 376 AGEAMKLLKEL 386
A+K+L +
Sbjct: 575 VKTAIKVLDNI 585
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 99/212 (46%), Gaps = 12/212 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN +I+ + + A F M + P++ SY+ + + G
Sbjct: 246 VYNALIHGVCKECRFKEA---FDLMNEMVDRGVDPNVISYSTVISCLSDMGN-------- 294
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E +F +M G P++ + S+IKG+ + V DA+ +++ M + PN +Y+
Sbjct: 295 VELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLM-IREGVSPNVVAYN 353
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LIHGLC+ G A + ++M++ P+ +Y++++ A +G++ + +MI
Sbjct: 354 TLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINC 413
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ + Y ++D +C+ +A L+ +
Sbjct: 414 GCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNM 445
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 89/170 (52%), Gaps = 12/170 (7%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +MV+ G++P++ S +++I +V +L +F +M V PN ++ LI G
Sbjct: 266 LMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRM-FVRGCRPNVQTFTSLIKGF 324
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ--RPV 358
+GR +A L + M R+G P+ +YN+L+ L +G ++E + ++W +EK RP
Sbjct: 325 FVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAI-SVWNQMEKDSIRP- 382
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQN----KNLIDGYTYTKLLDVL 404
+ TY T++ + G A + ++ N N++ YT ++DVL
Sbjct: 383 NVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVV---VYTCMVDVL 429
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 97/167 (58%), Gaps = 6/167 (3%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--GVVYNYLPNSFSYDYLIH 298
+F M+ G +P++ + +S++ GY L VN A IF+ M G V P+ SY+ LI+
Sbjct: 241 VFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVN---PDIQSYNILIN 297
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G C T A L +EM + +P+ +YNSL+ L +G++ +K + EM ++ +P
Sbjct: 298 GFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPP 357
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D ITY ++LD +C+ +A+ LL +L+++ L + YTYT L++ L
Sbjct: 358 DIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGL 404
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 10/171 (5%)
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+ +F M G+ PDI S N +I G+ + A+ +F +M +PN +Y+ LI
Sbjct: 274 KSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHC-RKIIPNVVTYNSLID 332
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC G+ A +L DEM +G P +Y+SL+ AL N ++ + L ++ ++
Sbjct: 333 GLCKSGKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQP 392
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-----TYTKLLDVL 404
+ TY +++ +C+ GR +A + ++L L+ GY TYT ++ V
Sbjct: 393 NMYTYTILINGLCKGGRPEDAQNIFEDL----LVKGYNINVNTYTVMIHVF 439
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 13/232 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y++++ + +++++A +F M P I+SYNIL F + K T
Sbjct: 257 YSSLMDGYCLVKEVNKAKSIFNNMAQGG---VNPDIQSYNILINGF-CKIKMT------- 305
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF++M I P++ + NS+I G S ++ AL++ +M P+ +Y
Sbjct: 306 DAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMH-DRGQPPDIITYSS 364
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ LC A L ++K +G P+ +Y L++ L G E+ +++ K
Sbjct: 365 LLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLLVKG 424
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
++ TY ++ C G GEA+ +L +++ I + TY ++ L D
Sbjct: 425 YNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFD 476
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 20/221 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR---PSIRSYNILFTAFLSRGKNTYINH 232
YN +I F + + A+ +F+ M CR P++ +YN L GK +Y
Sbjct: 292 YNILINGFCKIKMTDAAMNLFEEM------HCRKIIPNVVTYNSLIDGLCKSGKISYA-- 343
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND-ALRIFHQMGVVYNYLPNSF 291
L +M + G PDI + +S++ + NH D A+ + ++ PN +
Sbjct: 344 ------LKLVDEMHDRGQPPDIITYSSLLDA-LCKNHPGDKAIALLTKLKD-QGLQPNMY 395
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y LI+GLC GR ++A+ + +++ KG+ + +Y ++ NG E + L +M
Sbjct: 396 TYTILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKM 455
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
E + +TY ++ + + +A KLL E+ + L+
Sbjct: 456 EENGCIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGLL 496
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 23/249 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y++II+ + A +F M + P++ ++N+L A GK NH
Sbjct: 276 YSSIIHGMCHTGRWEGAKGLFNEMVDEG---VHPNVVTFNVLIDALCKAGKMEEANH--- 329
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L K M+ G PD F+ N++I G+ L ++DA +F M ++ SY+
Sbjct: 330 -----LLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSM-ESKGIETDAVSYNV 383
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C GR A++L EM K +P+ +YN+L++ L G+V + EM
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVLE 405
+ TY +LD +C+ EAM+L L+N + LIDG + +++
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503
Query: 406 DDFGNSIRH 414
+ F N + H
Sbjct: 504 ELF-NRLSH 511
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y TII + + + +F MK R + P + +Y+ + G+
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEMK-GRGIS--PDVVAYSSIIHGMCHTGR--------W 289
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + LF +MV++G+ P++ + N +I + + +A + M + P++F+Y+
Sbjct: 290 EGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLM-IQRGESPDTFTYNT 348
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +GR +AR+L M+ KG + SYN L++ +G + E K EM+ K+
Sbjct: 349 LIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE 408
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
ITY T+L + R G+ +A L E++ +L + TY LLD L
Sbjct: 409 IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGL 458
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 115/233 (49%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + ++ ++ A +++ M E P++ +YN L T GK +
Sbjct: 381 YNVLINGYCKSGRMVEAKKLYREMMCK---EIMPTVITYNTLLTGLFREGK--------V 429
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +M + P+ + N ++ G +NH+++A+ +FH + +++ P+ ++
Sbjct: 430 RDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYL-ENHDFQPSIQIFNC 488
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC + + AREL + + +G P+ +Y ++ L +G++E M EK
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
+ +T+ T++ C+ + ++LL+E+ K+ D T + ++D+L D
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKD 601
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 27/255 (10%)
Query: 136 DASTYHIMT-------RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
DA +Y+++ R + A K+Y+EM + +++ T YNT++ K
Sbjct: 377 DAVSYNVLINGYCKSGRMVEAKKLYREM--MCKEIMPT------VITYNTLLTGLFREGK 428
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ A +F MK + P +YNIL KN +++ ME LF + N
Sbjct: 429 VRDAWNLFGEMKVH---DLTPESCTYNILLDGLC---KNNHLSEA-ME----LFHYLENH 477
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
+P I N +I G + + A +F+++ PN +Y +IHGLC G+ +N
Sbjct: 478 DFQPSIQIFNCLIDGLCKARKIEIARELFNRLSH-EGLEPNVITYTVMIHGLCKSGQLEN 536
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A++L M+ KG P+ ++N+L+ N E+++ V+ L EM EK D T V+D
Sbjct: 537 AKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVD 596
Query: 369 EICRRGRAGEAMKLL 383
+ + + E + LL
Sbjct: 597 LLSKDEKYREYLHLL 611
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG------IEPDIFSLNSMI 261
RP++ +Y L G M ++ L ++M+N I+P++ ++I
Sbjct: 194 RPNVVTYGTLLNGLCMTGNT-------MLAVK-LHEEMLNGNGGFGVTIKPNLVCYCTII 245
Query: 262 KGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++ +F +M G+ P+ +Y +IHG+C GR + A+ L +EM
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGIS----PDVVAYSSIIHGMCHTGRWEGAKGLFNEMVD 301
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G P+ ++N L+ AL G++EE L MI++ D TY T++D C GR +
Sbjct: 302 EGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDD 361
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLD 402
A L +++K + D +Y L++
Sbjct: 362 ARDLFVSMESKGIETDAVSYNVLIN 386
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 8/174 (4%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F +++ P I S N+++ D + ++ +M ++ P+ + + LI+
Sbjct: 79 VFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLI-GLAPDFITLNILINCY 137
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C + + EM R+G P++ ++ SLV L L + E L +M+ +
Sbjct: 138 CNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNV 197
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT-------YTKLLDVLEDD 407
+TY T+L+ +C G A+KL +E+ N N G T Y ++D L D
Sbjct: 198 VTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKD 251
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 13/297 (4%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
++ M E ++ +I + + + +V +F+ M+ L +I+SY
Sbjct: 63 HARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKSY 118
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 119 NALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 171 RFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKG 229
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 230 YVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGILIENFCKAGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L+ + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWGLRPSVVS----FNTLMNGYIKLGDLNEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANVLFDEMLDKGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 FTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + G PS S+N+L++
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G++ E + M D TY +++ +C+ + +A L E+ +K L+ +G
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F E ++L +A+ + MK S C S+ ++ IL AF GK M
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSG---CSWSLVTWGILIDAFCKAGK--------M 228
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ K+M G+E D+ S+I+G+ ++ +F ++ + P + +Y+
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV-LERGDSPCAITYNT 287
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C G+ K A E+ + M +G P+ +Y L+ L G+ +E ++ L MIEK
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKD 347
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +TY +++++C+ G +A+++++ ++ + D TY LL L
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 22/246 (8%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
A KM + M L F G EA +Y ++I F + +L R +F + +
Sbjct: 225 AGKMDEAM-----GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD- 278
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P +YN L F G+ + + F+ M+ G+ P++++ +I G
Sbjct: 279 --SPCAITYNTLIRGFCKLGQLKEASEI--------FEFMIERGVRPNVYTYTGLIDGLC 328
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+AL+ + M + + PN+ +Y+ +I+ LC G +A E+ + MK++ P +
Sbjct: 329 GVGKTKEALQPLNLM-IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQR--PVDFITYRTVLDEICRRGRAGEAMKLL 383
+YN L+ L G+++E K L+ M++ D I+Y ++ +C+ R +A+ +
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 384 KELQNK 389
L K
Sbjct: 448 DLLVEK 453
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 22/240 (9%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---LSRGK--NTYINHVYME- 236
F+ RK+ ++ S LEC +R F L RG N Y +++ ++
Sbjct: 92 FSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKG 151
Query: 237 ---TIRC-----LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYN 285
+ C L ++M + + PD+FS N++I+G+ + AL + ++M G ++
Sbjct: 152 LCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWS 211
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+ ++ LI C G+ A EMK G Y SL+ GE++
Sbjct: 212 LV----TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGK 267
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
E++E+ ITY T++ C+ G+ EA ++ + + + + + YTYT L+D L
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGL 327
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEAR 187
K+ R R D TY+I+ L A E ++ ML S+ + + YN +I+ +
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L +A+ ++ + R + NIL + L G +N ME L+KQ+ +
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTT---NILLNSTLKAGD---VNKA-ME----LWKQISD 487
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
I + + +MI G+ + +N A + +M V P+ F Y+ L+ LC +G
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV-SELQPSVFDYNCLLSSLCKEGSLD 546
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A L +EM+R P S+N ++ G+++ L M D TY ++
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Query: 368 DEICRRGRAGEAMKLLKEL 386
+ + G EA+ ++
Sbjct: 607 NRFLKLGYLDEAISFFDKM 625
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 48/264 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN II + ++ AV + + MK R RP +YNIL ++G +
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRT---RPDNITYNILLGGLCAKGD--------L 403
Query: 236 ETIRCLFKQMVNDG--IEPDIFSLNSMIKGYILSNHVNDALRIF----HQMG----VVYN 285
+ L M+ D +PD+ S N++I G N ++ AL I+ ++G V N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 286 YLPNSF--------------------------SYDYLIHGLCAQGRTKNARELCDEMKRK 319
L NS +Y +I G C G A+ L +M+
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
PS YN L+S+L G +++ + EM D +++ ++D + G A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 380 MKLLKELQNKNLI-DGYTYTKLLD 402
LL + L D +TY+KL++
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 103/263 (39%), Gaps = 26/263 (9%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ---------EMDDVVNQM-----LATPS 168
L + K+ R Y ++ KLGA + DV M ++
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 169 FCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
Y +I F + L+ A + M+ S E +PS+ YN L ++ G
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS---ELQPSVFDYNCLLSSLCKEGS-- 544
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
++ LF++M D PD+ S N MI G + + + A + M P
Sbjct: 545 ------LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA-GLSP 597
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ F+Y LI+ G A D+M GF P + +S++ GE ++ + +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657
Query: 349 WEMIEKQRPVDFITYRTVLDEIC 371
++++K +D TV+D +C
Sbjct: 658 KKLVDKDIVLDKELTCTVMDYMC 680
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 13/297 (4%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
++ M E ++ +I + + + +V +F+ M+ L +I+SY
Sbjct: 63 HARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKSY 118
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 119 NALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 171 RFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKG 229
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 230 YVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIIMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + L + M S
Sbjct: 148 KEGEMRLAQSVFDEITKWGLRPSVVS----FNTLMNGYIRLGDLDEGFRLKSAMHGSG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K N LF +M+ +G+ P+ + ++I G+
Sbjct: 202 -IQPDVYTYSVLINGLCKESKMNDANE--------LFDEMIGNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ ++ A+ + +M + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KTGSIDLAMEAYKEM-LRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E K MI++ +D + Y ++ +CR G++ A K+L+E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLRE 371
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 372 MLSVGLKPDNGTYTMIIN 389
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF--------------------HQMGVVY-------- 284
D++ + +I Y+ S ++DAL F H M + Y
Sbjct: 65 DVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFY 124
Query: 285 ------NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C +G + A+ + DE+ + G PS S+N+L++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRL 184
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M D TY +++ +C+ + +A +L E+ L+ +G T+
Sbjct: 185 GDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTF 244
Query: 398 TKLLD 402
T L+D
Sbjct: 245 TTLID 249
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 132/341 (38%), Gaps = 81/341 (23%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
F WASKQP +RH Y M + LG + + + ++ +M + T ++ ++
Sbjct: 127 FFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRR 186
Query: 183 FAEARKLSRAVYVFKYM--------------------KNSRNLEC-----------RPSI 211
FA R + +AV V M KN E P++
Sbjct: 187 FASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNL 246
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
R + L + GK HV + Q+ G EPDI N+++ GY + +
Sbjct: 247 RHFTSLLYGWCREGKIMEAKHVLV--------QIKEAGFEPDIVVYNNLLGGYAQAGKMR 298
Query: 272 DALRIFHQMGVV--------YNYLPNSF--------------------------SYDYLI 297
DA + +M V + L SF +Y LI
Sbjct: 299 DAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 358
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
G C G T A E+ D+M +KG PS SY ++ A E+EE + E+IE+ R
Sbjct: 359 SGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECM----ELIEEMRK 414
Query: 358 V----DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
+ D Y T++ +C+ G EA++L E+Q L G
Sbjct: 415 IGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPG 455
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 121/312 (38%), Gaps = 39/312 (12%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEAR 187
K+ F D Y+ + A ++ D++ +M CG A + +I F +
Sbjct: 273 KEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVN--CGPNAASFTILIQSFCKTE 330
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR-------- 239
K+ A+ +F M+ S C + +Y L + F G + + I+
Sbjct: 331 KMDEAMRIFTEMQGSG---CEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQL 387
Query: 240 -----------------C--LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
C L ++M G PD+ N+MI+ + +A+R++ +M
Sbjct: 388 SYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEM 447
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV--PSSKSYNSLVSALALN 338
P +Y ++HG +QG A + EM +G + P + L +AL L
Sbjct: 448 QA-GGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNAL-LR 505
Query: 339 GEVEETVKNLWE-MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYT 396
E E KN+W M K ++ + + + G EA ++ + +L+ T
Sbjct: 506 AEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDT 565
Query: 397 YTKLLDVLEDDF 408
+ KL+ L+ F
Sbjct: 566 FAKLMRGLKKLF 577
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 126/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L+ + M S
Sbjct: 152 KDGDIRIAQSVFDAIAKWGLRPSVVS----YNTLMNGYIRLGDLNEGFRLKSAMLAS--- 204
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 205 GVQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLXPNGVTFTTLIDGHC 256
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A +L DEM KG
Sbjct: 257 KNGRVDLAMEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDK 315
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 316 ITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 375
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 376 MLSVGLKPDTXTYTMIIN 393
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
++ L+H C G + A+ + D + + G PS SYN+L++ G++ E + M+
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D TY +++ +C+ + +A +L E+ K L +G T+T L+D
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLID 253
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 162/368 (44%), Gaps = 68/368 (18%)
Query: 102 FNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVN 161
++E ++M + DP L++FN AS+Q F H+ +TY ++ L K + +D +++
Sbjct: 54 ISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILH 113
Query: 162 QM-LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMK-------------------- 200
QM T F E+L+ ++ F+ + + + +F ++
Sbjct: 114 QMKYETCRF--QESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLI 171
Query: 201 --------------NSRNLECRPSIRSYNILFT----------AFL-----SRGKNTYIN 231
NL +P+ +NIL AFL R +Y N
Sbjct: 172 DSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPN 231
Query: 232 HV-YMETIRCLF-----KQMVN--------DGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+ Y + CLF K+ V +GI PD + N MI G+ + V A +I
Sbjct: 232 SITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKIL 291
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
M PN ++Y L++G C G+ + A++ DE+K+ G + Y +L++
Sbjct: 292 DFMK-KNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR 350
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYT 396
NGE +E +K L EM + D +TY +L + GR+ EA+++L + ++ + ++ +
Sbjct: 351 NGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGS 410
Query: 397 YTKLLDVL 404
Y +L+ L
Sbjct: 411 YRIILNAL 418
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 119/259 (45%), Gaps = 12/259 (4%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
++ TY + L A +E ++ M++ +N +I F A ++ RA +
Sbjct: 231 NSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKI 290
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+MK + C P++ +Y+ L F GK ++ + F ++ G++ D
Sbjct: 291 LDFMKKNG---CNPNVYNYSALMNGFCKVGK--------IQEAKQTFDEVKKTGLKLDTV 339
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+++ + + ++A+++ +M ++ +Y+ ++ GL ++GR++ A ++ D+
Sbjct: 340 GYTTLMNCFCRNGETDEAMKLLGEMKA-SRCRADTLTYNVILRGLSSEGRSEEALQMLDQ 398
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
+G + SY +++AL NGE+E+ VK L M E+ T+ ++ +C G
Sbjct: 399 WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGY 458
Query: 376 AGEAMKLLKELQNKNLIDG 394
+++L LI G
Sbjct: 459 TEIGVRVLIGFLRIGLIPG 477
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ F + A+ + MK SR CR +YN++ S G++
Sbjct: 341 YTTLMNCFCRNGETDEAMKLLGEMKASR---CRADTLTYNVILRGLSSEGRS-------- 389
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + Q ++G+ + S ++ + + A++ M P+ +++
Sbjct: 390 EEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSE-RGIWPHHATWNE 448
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
L+ LC G T+ + R G +P KS+ ++V ++
Sbjct: 449 LVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESI 488
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 37/283 (13%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y + L K+ + ++ ++M+ T T N++IY + + A +
Sbjct: 210 DVVMYSTIIDGLCKDKLVNDAYELYSEMI-TKRISPTVVTLNSLIYGYCIVGQFKEAFGL 268
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M +N+ P + ++NIL A GK ++ + M+ +G+ PD+
Sbjct: 269 LREMV-LKNI--NPDVYTFNILVDALCKEGK--------IKEAKSGIAVMMKEGVMPDVV 317
Query: 256 SLNSMIKGYILSNHVNDA--------------------LRIFHQMGVVYNYLPNSFSYDY 295
+ +S++ GY L N VN A L +F++M P++ +Y+
Sbjct: 318 TYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRC-RRIAPDTVTYNS 376
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC GR A EL DEM+ G +YNSL+ AL N V++ + + ++ ++
Sbjct: 377 LIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQG 436
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYT 398
+D TY ++D +C++GR +A + ++L LI GY T
Sbjct: 437 IQLDMYTYNILIDGLCKQGRLKDAQVIFQDL----LIKGYNLT 475
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 10/198 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P+I S +IL + G+ M +F +++ G P+ +L +++KG+ L+
Sbjct: 103 KPNIVSLSILINCYCHLGQ--------MRFAFSIFAKILKMGYHPNTITLTTLVKGFCLN 154
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ V +AL FH + + N SY LI+GLC G T+ A ++ +++ K
Sbjct: 155 HKVKEALH-FHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVM 213
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y++++ L + V + + EMI K+ +T +++ C G+ EA LL+E+
Sbjct: 214 YSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMV 273
Query: 388 NKNL-IDGYTYTKLLDVL 404
KN+ D YT+ L+D L
Sbjct: 274 LKNINPDVYTFNILVDAL 291
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 142 IMTRKLGAAKMYQE--MDDVVNQMLATPSFC------GTEALYNTIIYFFAEARKLSRAV 193
I K G A M +E M DVV +C + +Y+ +I F + + + +A+
Sbjct: 297 IKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKAL 356
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F M+ R P +YN L G+ +Y L +M + G D
Sbjct: 357 SLFYEMRCRR---IAPDTVTYNSLIDGLCKSGRISYAWE--------LVDEMRDSGQPAD 405
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
I + NS+I ++HV+ A+ + ++ G+ + ++Y+ LI GLC QGR K+A+
Sbjct: 406 IITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDM----YTYNILIDGLCKQGRLKDAQ 461
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ ++ KG+ + +Y +++ L L G + E L +M + D +T T++ +
Sbjct: 462 VIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRAL 521
Query: 371 CRRGRAGEAMKLLKELQNKNLI 392
+ A KLL+E+ + L+
Sbjct: 522 FENDKNERAEKLLREMIARGLL 543
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ LF Q+ +GI+P+I SL+ +I Y + A IF ++ + Y PN+ + L
Sbjct: 89 TVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKI-LKMGYHPNTITLTTL 147
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ G C + K A D + GF + SY +L++ L GE ++ L ++ K
Sbjct: 148 VKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLV 207
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D + Y T++D +C+ +A +L E+ K +
Sbjct: 208 STDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRI 242
>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 481
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 140/310 (45%), Gaps = 15/310 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ + L+ F W + F+HD T+ + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHGAKKTEHALQFFRWVERSNLFQHDRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E L+ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDLWVLMIDSYGKKGIVQESVKLFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF L RG+ +M R F +M+N+GIEP + N MI G+ LS V A
Sbjct: 118 YDALFKVILRRGR-------FMMAKR-YFNKMLNEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
F M + P+ +Y+ LI+G + + A EMK + P+ +Y +L+
Sbjct: 170 NXFFEDMK-SRDITPDVITYNTLINGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-- 391
V++ + + EM + ITY T+L +C + EA +LKE+ +K +
Sbjct: 229 GYVSVDRVDDALSLMEEMKGFGIKPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAP 288
Query: 392 IDGYTYTKLL 401
D + KL+
Sbjct: 289 TDNSIFLKLI 298
>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 484
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 13/298 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YNXLFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 229 GYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 484
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 13/298 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YNALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 229 GYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 12/218 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+Y T+I F + + A +F M+ R + P +Y + GK + V
Sbjct: 81 VVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIV---PDFIAYTAVICGLCRCGKMMEADKV 137
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
F +M + G+EPD + ++I GY S + A + +QM V PN +Y
Sbjct: 138 --------FNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQM-VQSGLTPNVVTY 188
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
L GLC G+ A EL EM KG + +YNSLV+ L +G + + VK + EM
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D IT+ T++D C+ G +A +LL+E+ ++ L
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGL 286
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 4/156 (2%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G PD+ S +++I GY L + L++ +M + PN ++Y+ +I LC G+ +
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQM-KGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV-DFITYRTVL 367
A + EM +G VP + Y +L+ G ++ K L++ +EKQR V DFI Y V+
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYK-LFDEMEKQRIVPDFIAYTAVI 122
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+CR G+ EA K+ ++ ++ + D TYT L+D
Sbjct: 123 CGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLID 158
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 14/213 (6%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + SY+ + + G+ ++ + L ++M G++P++++ NS+I S
Sbjct: 8 PDVVSYSTVINGYCLGGE--------LQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSG 59
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V+DA R+ +M + +P++ Y LI G C G + A +L DEM+++ VP +Y
Sbjct: 60 KVDDAERVLREM-INQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAY 118
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+++ L G++ E K +M + D +TY T++D C+ G +A L ++
Sbjct: 119 TAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQ 178
Query: 389 KNLI-DGYTYTKLLDVL----EDDFGNSIRHHL 416
L + TYT L D L + D N + H +
Sbjct: 179 SGLTPNVVTYTALADGLCKLGQVDTANELLHEM 211
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 113/257 (43%), Gaps = 17/257 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
KLG + ++ D + + P F Y +I K+ A VF M SR +
Sbjct: 92 KLGNIQAAYKLFDEMEKQRIVPDFIA----YTAVICGLCRCGKMMEADKVFNKM-FSRGV 146
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
E P +Y L + G+ ME L QMV G+ P++ + ++ G
Sbjct: 147 E--PDEVTYTTLIDGYCKSGE--------MEKAFSLHNQMVQSGLTPNVVTYTALADGLC 196
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V+ A + H+M N +Y+ L++GLC G + A +L +EM+ G P +
Sbjct: 197 KLGQVDTANELLHEM-CGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDT 255
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
++ +L+ A GE+ + + L EM+++ IT+ +++ C G + +LL
Sbjct: 256 ITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAW 315
Query: 386 LQNKNLI-DGYTYTKLL 401
+ K ++ + TY L+
Sbjct: 316 MLEKGIMPNTTTYNSLM 332
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T++ + + ++ +A + + M + R L+ P++ ++N+L F G +
Sbjct: 258 FTTLMDAYCKTGEMVKAHELLREMLD-RGLQ--PTVITFNVLMNGFCMSG--------ML 306
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L M+ GI P+ + NS++K Y + N++ I+ M +P+S +Y+
Sbjct: 307 EDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGM-CARGVMPDSNTYNI 365
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C K A L EM KGF ++ SYNS++ ++ E + EM +
Sbjct: 366 LIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREG 425
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
D Y +D G A++L E
Sbjct: 426 MAADAEIYNLFVDISYGEGNMETALELCDE 455
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 116/307 (37%), Gaps = 53/307 (17%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNT 178
+LF+ KQ R D Y + L E D V N+M + P E Y T
Sbjct: 101 KLFDEMEKQ-RIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPD----EVTYTT 155
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
+I + ++ ++ +A + M S P++ +Y L G+ ++T
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSG---LTPNVVTYTALADGLCKLGQ--------VDTA 204
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY------------ 286
L +M G++ +I + NS++ G S ++ A+++ +M V Y
Sbjct: 205 NELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDA 264
Query: 287 ----------------------LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
P +++ L++G C G ++ L M KG +P+
Sbjct: 265 YCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPN 324
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ +YNSL+ + + T + M + D TY ++ C+ EA L K
Sbjct: 325 TTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHK 384
Query: 385 ELQNKNL 391
E+ K
Sbjct: 385 EMAEKGF 391
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
MK +G P SY+++++ L GE+++ +K + EM K + TY +++ +C+ G+
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+A ++L+E+ N+ ++ D YT L+D
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLID 88
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 13/297 (4%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
++ M E ++ +I + + + +V +F+ M+ L +I+SY
Sbjct: 63 HARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKSY 118
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 119 NALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 171 RFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKG 229
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 230 YVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ V L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAVDVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 19/230 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +IY + L A VFK MKNS L P + SY+IL F +G+ + V
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGIL---PDVYSYSILIDGFCRKGRVDQASEV-- 337
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
FK+M N GI P+I+S + +I G+ V+ AL +F +M G+ LP+ +S
Sbjct: 338 ------FKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGI----LPDVYS 387
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI G C +G +A + +EM F PS+ +Y SL+ + + +K M
Sbjct: 388 YSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQ 447
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ D I +L CR+ +A+ L ++ Q + + Y+Y + +
Sbjct: 448 KLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFI 497
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
RP+I +Y I+ F RG ++ + + ++ G P++ + + IKG
Sbjct: 203 RPNIHTYTIMMN-FFCRGVGCSVD---IRRASEILGKIYMSGETPNVVTYGTYIKGLCKV 258
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
A R+ + N N+ ++ +I+GLC G A E+ EMK G +P S
Sbjct: 259 GLFGVAWRLIQNL-CRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYS 317
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y+ L+ G V++ + EM + +Y ++D C+ GR +A+++ +E++
Sbjct: 318 YSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMK 377
Query: 388 NKNLI-DGYTYTKLLD 402
N ++ D Y+Y+ L+D
Sbjct: 378 NSGILPDVYSYSILID 393
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 46/261 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I F + ++ +A+ VF+ MKNS L P + SY+IL F +G M
Sbjct: 353 YSILIDGFCKEGRVDKALEVFEEMKNSGIL---PDVYSYSILIDGFCRKGD--------M 401
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL---RIFHQMGV---------- 282
++ +++M ++ P F+ S+IKGY S +AL RI ++G+
Sbjct: 402 DSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHI 461
Query: 283 --VYNYLP-------------------NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+Y P N +SY+ IH +C + A +L M ++
Sbjct: 462 LSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNV 521
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P +Y++L+S A E+ V +M + + TY +++ + A +
Sbjct: 522 LPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYR 581
Query: 382 LLKELQNKNLI-DGYTYTKLL 401
L K ++ + D YT L+
Sbjct: 582 LFKGMKESRVYPDQIAYTSLV 602
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 13/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I FA+ +AV +F M + ++++Y IL F+S K M
Sbjct: 528 YSTLISCFAKRLNSEKAVMLFIKMTK---VGITFNVKTYTILINLFISDCK--------M 576
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LFK M + PD + S++ G+ + + A +F +M PN +Y
Sbjct: 577 DVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSR-EGCSPNVVTYTC 635
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
I+ + A +L ++MK +G P Y L++A GE+ EM ++
Sbjct: 636 FINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEG 695
Query: 356 RPV-DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
R + + Y +++ + + +A KL +E++ K L
Sbjct: 696 RCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 15/185 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + +Y+ L + F R + E LF +M GI ++ + +I +I
Sbjct: 523 PDVVNYSTLISCFAKRLNS--------EKAVMLFIKMTKVGITFNVKTYTILINLFISDC 574
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ A R+F M Y P+ +Y L+ G C G AR L DEM R+G P+ +Y
Sbjct: 575 KMDVAYRLFKGMKESRVY-PDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTY 633
Query: 329 NSLVSA-LALNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDEICRRGRAGEAMKLLKE 385
++ L LN L+E + K+R V D I Y ++ C G A L E
Sbjct: 634 TCFINEYLKLNK--NNQAHKLYEKM-KERGVYPDQILYTMLIAAFCNTGEMNRAEALFDE 690
Query: 386 LQNKN 390
++ +
Sbjct: 691 MKQEG 695
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 11/171 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +++ F +++RA +F M C P++ +Y +L KN + +Y
Sbjct: 598 YTSLVAGFCNTGEMTRARALFDEMSRE---GCSPNVVTYTCFINEYLKLNKNNQAHKLY- 653
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++M G+ PD +I + + +N A +F +M PN Y
Sbjct: 654 -------EKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTC 706
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
LI+ + A +L +EM+ KG S S+ + +V +T K
Sbjct: 707 LINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWCCRHQVLKTGK 757
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 8/165 (4%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLI 297
L M+ + PD+ + +++I + + A+ +F +M G+ +N +Y LI
Sbjct: 512 LLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVK----TYTILI 567
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
+ + + A L MK P +Y SLV+ GE+ EM +
Sbjct: 568 NLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCS 627
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ +TY ++E + + +A KL ++++ + + D YT L+
Sbjct: 628 PNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLI 672
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 132/341 (38%), Gaps = 81/341 (23%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
F WASKQP +RH Y M + LG + + + ++ +M + T ++ ++
Sbjct: 150 FFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRR 209
Query: 183 FAEARKLSRAVYVFKYM--------------------KNSRNLEC-----------RPSI 211
FA R + +AV V M KN E P++
Sbjct: 210 FASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNL 269
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
R + L + GK HV + Q+ G EPDI N+++ GY + +
Sbjct: 270 RHFTSLLYGWCREGKIMEAKHVLV--------QIKEAGFEPDIVVYNNLLGGYAQAGKMR 321
Query: 272 DALRIFHQMGVV--------YNYLPNSF--------------------------SYDYLI 297
DA + +M V + L SF +Y LI
Sbjct: 322 DAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 381
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
G C G T A E+ D+M +KG PS SY ++ A E+EE + E+IE+ R
Sbjct: 382 SGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECM----ELIEEMRK 437
Query: 358 V----DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
+ D Y T++ +C+ G EA++L E+Q L G
Sbjct: 438 IGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPG 478
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 121/312 (38%), Gaps = 39/312 (12%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEAR 187
K+ F D Y+ + A ++ D++ +M CG A + +I F +
Sbjct: 296 KEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVN--CGPNAASFTILIQSFCKTE 353
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR-------- 239
K+ A+ +F M+ S C + +Y L + F G + + I+
Sbjct: 354 KMDEAMRIFTEMQGSG---CEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQL 410
Query: 240 -----------------C--LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
C L ++M G PD+ N+MI+ + +A+R++ +M
Sbjct: 411 SYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEM 470
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV--PSSKSYNSLVSALALN 338
P +Y ++HG +QG A + EM +G + P + L +AL L
Sbjct: 471 QA-GGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNAL-LR 528
Query: 339 GEVEETVKNLWE-MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYT 396
E E KN+W M K ++ + + + G EA ++ + +L+ T
Sbjct: 529 AEKLEMAKNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDT 588
Query: 397 YTKLLDVLEDDF 408
+ KL+ L+ F
Sbjct: 589 FAKLMRGLKKLF 600
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 13/297 (4%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
++ M E ++ +I + + + +V +F+ M+ L +I+SY
Sbjct: 63 HARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKSY 118
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 119 NALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 171 RFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKG 229
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 230 YVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 125/240 (52%), Gaps = 16/240 (6%)
Query: 147 LGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
L A++++++M +++ L P T +N ++ F + L A + + MK + NL
Sbjct: 273 LEASRIFRDMQ--IDEELGLPRPNITT--FNLMLEGFCKEGMLEEAKTLVESMKRNGNL- 327
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
+ SYNI + GK + + K+MV+ GIEP+I+S N+++ G
Sbjct: 328 --MELESYNIWLLGLVRNGK--------LLEAQLALKEMVDKGIEPNIYSFNTVMDGLCK 377
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ ++DA R+ + + P++ +Y L+HG C+ G+ A + EM R+G P++
Sbjct: 378 NGLISDA-RMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTY 436
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ N L+ +L G + E K L +M E+ +D +T V+D +C+ G+ EA+++++ +
Sbjct: 437 TCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGM 496
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 11/246 (4%)
Query: 142 IMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKN 201
I+T L AKM ++D + +L P +L +I A++ A F+ +
Sbjct: 49 IITHILIRAKMISQIDHLQQLLLQQPQEVSHVSLI-ALIRILAKSGLSDLAFSQFQSFR- 106
Query: 202 SRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMI 261
S+ P + YN++ + L K +++ L+K MV G+ P+ ++LN +I
Sbjct: 107 SQVPANPPPVYLYNMVLESSLREDK--------VDSFSWLYKDMVVAGVSPETYTLNLLI 158
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
G S DA +F +MGV PN FS+ L+ G C G + A EL D M G
Sbjct: 159 AGLCDSGRFEDAREVFDKMGV-KGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGV 217
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P+ YN+L+S+ G EE + + M E D +T+ + + +C G+ EA +
Sbjct: 218 QPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASR 277
Query: 382 LLKELQ 387
+ +++Q
Sbjct: 278 IFRDMQ 283
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 142/318 (44%), Gaps = 22/318 (6%)
Query: 91 FRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQ---PRFRHDASTYHIMTRKL 147
FR V PP + +L+ED + + F+W K + T +++ L
Sbjct: 105 FRSQVPANPPPVYLYNMVLESSLREDKV---DSFSWLYKDMVVAGVSPETYTLNLLIAGL 161
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
+ +++ +V ++M E + ++ + A RA+ + M +
Sbjct: 162 CDSGRFEDAREVFDKM-GVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGS---FGV 217
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P+ YN L ++F G+N E L ++M DG+ PD+ + NS I +
Sbjct: 218 QPNKVIYNTLISSFCREGRN--------EEAERLVERMREDGLFPDVVTFNSRISALCSA 269
Query: 268 NHVNDALRIFHQMGVVYNY---LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ +A RIF M + PN +++ ++ G C +G + A+ L + MKR G +
Sbjct: 270 GKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLME 329
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+SYN + L NG++ E L EM++K + ++ TV+D +C+ G +A ++
Sbjct: 330 LESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMG 389
Query: 385 ELQNKNL-IDGYTYTKLL 401
+ + + D TY+ LL
Sbjct: 390 LMISSGIGPDTVTYSTLL 407
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD+ + + +I G + +++A + F +M V + P+S YD IH C G+ +A
Sbjct: 526 PDLITYSIIINGLCKAGRLDEARKKFIEM-VGKSLHPDSIIYDTFIHSFCKHGKISSAFR 584
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ +M+++G S ++YNSL+ L ++ E L +M EK + TY ++ +C
Sbjct: 585 VLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLC 644
Query: 372 RRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
GR +A LL E+ K + + +LL
Sbjct: 645 EGGRIKDATSLLDEMLQKGISPNISSFRLL 674
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 11/231 (4%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC-RPSIRSYNILFTAFLSRGKNTYINHVY 234
+N+ I A K+ A +F+ M+ L RP+I ++N++ F G
Sbjct: 259 FNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEG--------M 310
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E + L + M +G ++ S N + G + + + +A +M V PN +S++
Sbjct: 311 LEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEM-VDKGIEPNIYSFN 369
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ GLC G +AR + M G P + +Y++L+ G+V + L EM+ +
Sbjct: 370 TVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRR 429
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ T +L + + GR EA KLL+++ ++ +D T ++D L
Sbjct: 430 GCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGL 480
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 116/302 (38%), Gaps = 47/302 (15%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
+ L + +S + D TY I+ L A E +M+ S +Y+T I
Sbjct: 512 IGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGK-SLHPDSIIYDTFI 570
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ F + K+S A F+ +K+ C S+++YN L S+ N ++ I
Sbjct: 571 HSFCKHGKISSA---FRVLKDMEKRGCNKSLQTYNSLILGLGSK------NQIF--EIYG 619
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L M GI P+I + N+MI + DA + +M + PN S+ LI
Sbjct: 620 LLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEM-LQKGISPNISSFRLLIKAF 678
Query: 301 CAQ----------------------------------GRTKNARELCDEMKRKGFVPSSK 326
C G A+EL D + F +
Sbjct: 679 CKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNF 738
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
YN L+ L + +E L +MI+K D ++ V+D + +RG+ +A +L + +
Sbjct: 739 QYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERM 798
Query: 387 QN 388
+
Sbjct: 799 MD 800
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 13/297 (4%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 3 IRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
++ M E ++ +I + + + +V +F+ M+ L +I+SY
Sbjct: 63 HARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKSY 118
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 119 NALFXVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 171 RFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKG 229
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 230 YVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYL 286
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDII 358
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 108/240 (45%), Gaps = 23/240 (9%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
PSF E +YN + A+ A+ F++++ S E R ++ L G
Sbjct: 7 VPSF-DHELVYNVL----HSAKTSEHALQFFRWVERSNLFEHN---RETHLKIIEIL--G 56
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
+ + +NH RC+ M G+E D MI Y V +++++F +M GV
Sbjct: 57 RASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGV 111
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+VE
Sbjct: 112 ERTIK----SYNALFXVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVE 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+ +M ++ D +TY T+++ R + EA K E++ +N+ TYT L+
Sbjct: 168 TANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLI 227
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 146/292 (50%), Gaps = 19/292 (6%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGA-AKMYQEMDDVVNQMLATPSFCGT 172
+++PL L LF AS+ H A +H + R+L A +++ + +V+ + A C
Sbjct: 23 EKNPLSALSLFESASRNKS--HSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPC-K 79
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E + T+I +A+ + ++A+ F+ M++ C+P +RSYN L AF+ +
Sbjct: 80 EDVALTVIKAYAKNKMSNKALDTFQNMQDI--FGCKPGVRSYNTLLNAFVELNEWD---- 133
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
E+ F+ M + P++ + N +IK + A+ + M N P+ FS
Sbjct: 134 -RAESFSRYFESM---DVSPNLQTYNILIKISCKKQQIEKAISLLDWMW-SQNLKPDVFS 188
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+G+ G A ++ DEM +G V YN L+ +G+ ++ K +WE +
Sbjct: 189 YGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKG-KEIWERL 247
Query: 353 EKQRPV--DFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
K V + +TY +++ +C+ GR E++++ + + +N+ D +TY+ L+
Sbjct: 248 VKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLI 299
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 121/279 (43%), Gaps = 28/279 (10%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFCGTEAL 175
L++F A P + DA Y M L E +VNQM P C
Sbjct: 416 LKIFKEAEDGPG-KLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVC----- 469
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
N +I F A KL A+ F+ M+ C P+I SYN L K + Y
Sbjct: 470 -NPLINGFVRASKLEDAINFFREMECKG---CSPTIVSYNTLIKGLC---KAERFSEAY- 521
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
K+M+ +PD+ + + ++ G + AL ++ Q + + P+ Y+
Sbjct: 522 ----SFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQ-ALDKGFKPDITMYNI 576
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+HGLC+ + ++A +L MKR VP+ + N+L+ L + E+ +W+ I K
Sbjct: 577 LMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKA-SEIWDCILKD 635
Query: 356 --RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
P D I+Y + +C R +A++ L + N+ ++
Sbjct: 636 GLHP-DIISYNITIKGLCSCSRISDAIEFLNDALNRGIL 673
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 145/335 (43%), Gaps = 70/335 (20%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRK-------LGAAKMYQEMDDVVNQMLATPSFCGTE 173
+ L +W Q + D +Y + LGA K++ EM V ++A +
Sbjct: 171 ISLLDWMWSQ-NLKPDVFSYGTLINGMVKVGDLLGALKVFDEMS--VRGVVADVT----- 222
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
YN +I F + + +++ + ++ P++ +YNI+ G+
Sbjct: 223 -CYNMLIDGFFKHGDYDKGKEIWERL--VKDCSVYPNVVTYNIMINGLCKCGR------- 272
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYN 285
+ E++ ++++M + E D+F+ +S+I G + +++ A+R++ ++ V +N
Sbjct: 273 FDESLE-IWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHN 331
Query: 286 YLPNSF-------------------------SYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+ N F SY+ LI GL G+ + A + + + +KG
Sbjct: 332 AMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCKKG 391
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P S +Y L+ L NG + + +K E + +D Y +++D +C+ GR EA+
Sbjct: 392 CRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAI 451
Query: 381 KLLKELQNKN----------LIDGYT-YTKLLDVL 404
++ ++ + LI+G+ +KL D +
Sbjct: 452 SIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAI 486
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 30/292 (10%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTE 173
LE++ +K R D TY + L GA ++Y+E + S
Sbjct: 277 LEIWERMTKNER-EKDMFTYSSLIHGLCEAGNIDGAVRVYKE--------IVESSLVVDA 327
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+N ++ F A K+ + ++ M C+ ++ SYNIL GK
Sbjct: 328 VTHNAMLNGFCRAGKIKESFELWMVMGKEN---CQ-TVVSYNILIKGLFENGK------- 376
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+E +++ + G P+ + +I G + +N AL+IF + L ++++Y
Sbjct: 377 -VEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKL-DAYAY 434
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
++ GLC +GR A + ++M ++G+ N L++ ++E+ + EM
Sbjct: 435 SSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMEC 494
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
K ++Y T++ +C+ R EA +KE+ K D T + L+D L
Sbjct: 495 KGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGL 546
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 14/266 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA T++ M A +E ++ M+ C T YN +I E K+ A+ +
Sbjct: 326 DAVTHNAMLNGFCRAGKIKESFEL--WMVMGKENCQTVVSYNILIKGLFENGKVEEAISI 383
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
++ + CRP +Y +L G+ +N +FK+ + + D +
Sbjct: 384 WELLCKKG---CRPESTTYGVLIHGLCKNGR---LNKALK-----IFKEAEDGPGKLDAY 432
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +SM+ G +++A+ I +QM Y + + LI+G + ++A E
Sbjct: 433 AYSSMVDGLCKEGRMDEAISIVNQMDK-RGYKLDPHVCNPLINGFVRASKLEDAINFFRE 491
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+ KG P+ SYN+L+ L E + EM+EK+ D IT ++D +C+ +
Sbjct: 492 MECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKK 551
Query: 376 AGEAMKLLKELQNKNLIDGYTYTKLL 401
A+ L ++ +K T +L
Sbjct: 552 IEMALNLWQQALDKGFKPDITMYNIL 577
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++IK Y + N AL F M ++ P SY+ L++ A +
Sbjct: 85 TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES 144
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
P+ ++YN L+ ++E+ + L M + D +Y T+++ + + G
Sbjct: 145 MDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLG 204
Query: 379 AMKLLKELQNKNLIDGYT-YTKLLD 402
A+K+ E+ + ++ T Y L+D
Sbjct: 205 ALKVFDEMSVRGVVADVTCYNMLID 229
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 13/298 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YNALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 229 GYVSVDQVDDALRLVEEMKGFGIKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMING 194
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
+ K ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 195 YYRVKK--------MEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ L MI P + Y ++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NPDAAADVLKAMIRLSVPTEAGHYGXLIXNFCKVGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 36/306 (11%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTE 173
DP L LF A +P A HI+ R A+ + + +++ + A P F
Sbjct: 83 DPDAALHLFRLAPSRPSLVSHAQLLHILAR----ARRFHDARALLSSLPPHAEPLFPHLA 138
Query: 174 ALY----------NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
+Y + ++ A+A +LS A+ VF M + CRPS+RS N L +
Sbjct: 139 EVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGK---VGCRPSLRSCNRLLNKLVQ 195
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ---M 280
G VY QM G+ PD F++ M K Y V A+ + M
Sbjct: 196 SGDPGMAAMVY--------GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGM 247
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
G+ N + +Y ++ C G T++AR + + ++RKG P+ +Y LV +G
Sbjct: 248 GLEVNLV----AYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGR 303
Query: 341 VEETVKNLWEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYT 398
+EE + + EM E VD + Y +++ C+RGR +A ++ E+++ + ++ + Y
Sbjct: 304 MEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYN 363
Query: 399 KLLDVL 404
+++ L
Sbjct: 364 TMINGL 369
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 12/214 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YNT+I KL R V K ++ ++ RP SYN L + G
Sbjct: 361 VYNTMINGLC---KLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS-------- 409
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
M + + MV +G+ + N+++KG+ + ++DALR++ M + PN S
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM-LKRGVAPNEISCS 468
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GL G+T+ A L E +G + ++N++++ L G + E + L M E
Sbjct: 469 TLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ P D +TYRT+ D C+ G+ G A L+ ++++
Sbjct: 529 RCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH 562
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 113/221 (51%), Gaps = 18/221 (8%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
++N II+ ++ +++ A +F+ ++N R L P +Y+ L + G I+ +
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFL---PDNFTYSSLIHGCAASGS---IDEAF 755
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
L M++ G+ P+I + NS+I G S ++ A+ +F+++ G+ PN
Sbjct: 756 -----SLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGIS----PNGI 806
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ LI C +G+T A +L +M +G P+ +Y+ L+ L G +EE +K L +M
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 866
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
IE ++ITY T++ + G E KL E+ + L+
Sbjct: 867 IENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLL 907
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 2/164 (1%)
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+ LF+ + N PD F+ +S+I G S +++A + M + PN +Y+ LI+
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM-LSAGLTPNIITYNSLIY 778
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC G+ A L ++++ KG P+ +YN+L+ G+ E K +M+E+
Sbjct: 779 GLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQP 838
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLL 401
ITY ++ +C +G EA+KLL ++ N+ Y TY L+
Sbjct: 839 TVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLI 882
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 19/200 (9%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAE 185
+ RF D TY + A+ E + + ML+ TP+ YN++IY +
Sbjct: 727 RNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNI----ITYNSLIYGLCK 782
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
+ KLSRAV +F ++ S+ + P+ +YN L + GK T E + L ++M
Sbjct: 783 SGKLSRAVNLFNKLQ-SKGIS--PNGITYNTLIDEYCKEGKTT-------EAFK-LKQKM 831
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
V +GI+P + + + +I G ++ +A+++ QM + N PN +Y LIHG G
Sbjct: 832 VEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM-IENNVDPNYITYCTLIHGYIKSGN 890
Query: 306 TKNARELCDEMKRKGFVPSS 325
+ +L DEM +G +P++
Sbjct: 891 MEEISKLYDEMHIRGLLPTN 910
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++ + + ++ A V K MK + ++ +Y ++ + RG+ M
Sbjct: 291 YTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEV--AYGMMINGYCQRGR--------M 340
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + +M + GI ++F N+MI G + + ++ +M V P+ +SY+
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV-GMRPDKYSYNT 399
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G + A E+C M R G ++ +YN+L+ +++ ++ + M+++
Sbjct: 400 LIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRG 459
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ I+ T+LD + + G+ +A+ L KE + L
Sbjct: 460 VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGL 495
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
+ Y + E R + + + G+ P++ + ++KGY + +A R+ +M +
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ + +Y +I+G C +GR +A + +EM+ G + YN++++ L G +EE K
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
L EM + D +Y T++D CR G +A ++ + + L TY LL
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL 436
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 31/264 (11%)
Query: 150 AKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRAVYV-FKYMKNSRNL 205
AK + +++D+ ++M A +P+ Y +I + + L A + F+ + N N
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNL----VTYGALIAGWCKEGNLHEACNLYFEMVNNGMN- 636
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR------CLFKQMVNDGIEPDIFSL-- 257
P++ + L + F GK N V + + C + D I + ++
Sbjct: 637 ---PNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIAD 693
Query: 258 ----------NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
N +I G S + DA +F + +LP++F+Y LIHG A G
Sbjct: 694 GNPHSANVMWNVIIFGLCKSGRIADAKSLFESL-RNKRFLPDNFTYSSLIHGCAASGSID 752
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A L D M G P+ +YNSL+ L +G++ V ++ K + ITY T++
Sbjct: 753 EAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLI 812
Query: 368 DEICRRGRAGEAMKLLKELQNKNL 391
DE C+ G+ EA KL +++ + +
Sbjct: 813 DEYCKEGKTTEAFKLKQKMVEEGI 836
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 100/253 (39%), Gaps = 39/253 (15%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I + +++ A + MK L C P +Y LF + G+ H
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMKE---LRCPPDSLTYRTLFDGYCKLGQLGTATH--- 555
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M + G P + NS I G+ ++ + I +M PN +Y
Sbjct: 556 -----LMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSA-RGLSPNLVTYGA 609
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET----------- 344
LI G C +G A L EM G P+ ++L+S G+V+E
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNID 669
Query: 345 --------------VKNLWEMIEKQRPVDF-ITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+ ++ + I P + + ++ +C+ GR +A L + L+NK
Sbjct: 670 MIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNK 729
Query: 390 NLI-DGYTYTKLL 401
+ D +TY+ L+
Sbjct: 730 RFLPDNFTYSSLI 742
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 97/230 (42%), Gaps = 12/230 (5%)
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+M+ T YNT++ F + A+ ++ ++ R + P+ S + L
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLW-FLMLKRGVA--PNEISCSTLLDGL 474
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
GK E L+K+ + G+ ++ + N++I G + +A + +M
Sbjct: 475 FKAGKT--------EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK 526
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
+ P+S +Y L G C G+ A L ++M+ GF PS + +NS ++ + +
Sbjct: 527 EL-RCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ EM + + +TY ++ C+ G EA L E+ N +
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 138/306 (45%), Gaps = 36/306 (11%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTE 173
DP L LF A +P A HI+ R A+ + + +++ + A P F
Sbjct: 83 DPDAALHLFRLAPSRPSLVSHAQLLHILAR----ARRFHDARALLSSLPPHAEPLFPHLA 138
Query: 174 ALY----------NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
+Y + ++ A+A +LS A+ VF M + CRPS+RS N L +
Sbjct: 139 EVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGK---VGCRPSLRSCNRLLNKLVQ 195
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ---M 280
G VY QM G+ PD F++ M K Y V A+ + M
Sbjct: 196 SGDPGMAAMVY--------GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGM 247
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
G+ N + +Y ++ C G T++AR + + ++RKG P+ +Y LV +G
Sbjct: 248 GLEVNLV----AYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGR 303
Query: 341 VEETVKNLWEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYT 398
+EE + + EM E VD + Y +++ C+RGR +A ++ E+++ + ++ + Y
Sbjct: 304 MEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYN 363
Query: 399 KLLDVL 404
+++ L
Sbjct: 364 TMINGL 369
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 12/214 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YNT+I KL R V K ++ ++ RP SYN L + G
Sbjct: 361 VYNTMINGLC---KLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS-------- 409
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
M + + MV +G+ + N+++KG+ + ++DALR++ M + PN S
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM-LKRGVAPNEISCS 468
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GL G+T+ A L E +G + ++N++++ L G + E + L M E
Sbjct: 469 TLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ P D +TYRT+ D C+ G+ G A L+ ++++
Sbjct: 529 RCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEH 562
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 37/277 (13%)
Query: 150 AKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRAVYV-FKYMKNSRNL 205
AK + +++D+ ++M A +P+ Y +I + + L A + F+ + N N
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNL----VTYGALIAGWCKEGNLHEACNLYFEMVNNGMN- 636
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR------CLFKQMVNDGIEPDIFSL-- 257
P++ + L + F GK N V + + C + D I + ++
Sbjct: 637 ---PNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIAD 693
Query: 258 ----------NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
N +I G S + DA +F + +LP++F+Y LIHG A G
Sbjct: 694 GNPHSANVMWNVIIFGLCKSGRIADAKSLFESL-RNKRFLPDNFTYSSLIHGCAASGSID 752
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A L D M G P+ +YNSL+ L +G++ V ++ K + ITY T++
Sbjct: 753 EAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLI 812
Query: 368 DEICRRGRAGEAMKLLKELQNKNLIDGYT--YTKLLD 402
DE C+ G+ EA K L+ K + +GY KLLD
Sbjct: 813 DEYCKEGKTTEAFK----LKQKMVEEGYMEEAIKLLD 845
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++ + + ++ A V K MK + ++ +Y ++ + RG+ M
Sbjct: 291 YTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEV--AYGMMINGYCQRGR--------M 340
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + +M + GI ++F N+MI G + + ++ +M V P+ +SY+
Sbjct: 341 DDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV-GMRPDKYSYNT 399
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G + A E+C M R G ++ +YN+L+ +++ ++ + M+++
Sbjct: 400 LIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRG 459
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ I+ T+LD + + G+ +A+ L KE + L
Sbjct: 460 VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGL 495
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
+ Y + E R + + + G+ P++ + ++KGY + +A R+ +M +
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ + +Y +I+G C +GR +A + +EM+ G + YN++++ L G +EE K
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
L EM + D +Y T++D CR G +A ++ + + L TY LL
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL 436
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+ LF+ + N PD F+ +S+I G S +++A + M + PN +Y+ LI+
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM-LSAGLTPNIITYNSLIY 778
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS----------------ALALNGEVE 342
GLC G+ A L ++++ KG P+ +YN+L+ + G +E
Sbjct: 779 GLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYME 838
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
E +K L +MIE ++ITY T++ + G E KL E+ + L+
Sbjct: 839 EAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLL 888
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 97/230 (42%), Gaps = 12/230 (5%)
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+M+ T YNT++ F + A+ ++ ++ R + P+ S + L
Sbjct: 418 RMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLW-FLMLKRGVA--PNEISCSTLLDGL 474
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
GK E L+K+ + G+ ++ + N++I G + +A + +M
Sbjct: 475 FKAGKT--------EQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK 526
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
+ P+S +Y L G C G+ A L ++M+ GF PS + +NS ++ + +
Sbjct: 527 EL-RCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ EM + + +TY ++ C+ G EA L E+ N +
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAE 185
+ RF D TY + A+ E + + ML+ TP+ YN++IY +
Sbjct: 727 RNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNII----TYNSLIYGLCK 782
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT--------YINHVYMET 237
+ KLSRAV +F ++ S+ + P+ +YN L + GK T + YME
Sbjct: 783 SGKLSRAVNLFNKLQ-SKGIS--PNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEE 839
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV 282
L QM+ + ++P+ + ++I GYI S ++ + +++ +M +
Sbjct: 840 AIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHI 884
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 141/310 (45%), Gaps = 15/310 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YNALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-- 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 229 GYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAP 288
Query: 392 IDGYTYTKLL 401
D + +L+
Sbjct: 289 TDNXIFMRLI 298
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMING 194
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
+ K ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 195 YYRVKK--------MEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNXIFMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDII 358
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 13/297 (4%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 3 IRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
++ M E ++ +I + + + +V +F+ M+ L +I+SY
Sbjct: 63 HARCILLDM-PKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKME---ELGVERTIKSY 118
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 119 NALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 171 RFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKG 229
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 230 YVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L M+ P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMVRLSVPTEAGHYGVLIENFCKAGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|357135887|ref|XP_003569539.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Brachypodium distachyon]
Length = 476
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 150/316 (47%), Gaps = 22/316 (6%)
Query: 96 SELPPRFNNEELCNVMTLQEDPLVCLELFNWA---SKQPRFRHDASTYHIMTRKLGAAKM 152
++ P L ++ + DP L LF+ A S T ++T +L +A +
Sbjct: 9 AKWPKTLTAGHLHRLVRAERDPRRALALFDAATAASVSAPILPSPDTVSLLTSRLASAGL 68
Query: 153 YQEMDDVVNQMLAT-PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
++++ A PS E + T++ F+ + A+ +F+ ++ L S
Sbjct: 69 LPLATSLLSRSRALFPSAADLEPPFLTLLRAFSRTHRPLAALQLFRSAPSALALPH--SA 126
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI--LSNH 269
RSY TA L+ T ++H ++ L M G P + N ++K + S
Sbjct: 127 RSY----TAVLA----TLVSHSHLPLAHSLLADMRAGGFAPTTATYNVLLKAHCSDASAP 178
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ DA+R+F + P++ SY+ +I GLC + R +A+E+ EM G P+ +Y
Sbjct: 179 IEDAVRLFRNIPK-----PDACSYNTVIDGLCRRSRRADAQEIFSEMVANGVAPTVVTYT 233
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QN 388
++++ LA +G +++ +K EM + +TY +++D +C+ GRA A++LL + +
Sbjct: 234 TVINWLARDGCLDDALKMFDEMGRIGIAPNVVTYSSLIDGLCKGGRAASALELLDRMAKE 293
Query: 389 KNLIDGYTYTKLLDVL 404
L + TY+ +++ L
Sbjct: 294 AKLPNTITYSSVINGL 309
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 19/272 (6%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY 176
PL L+LF A H A +Y + L + ++ M A F T A Y
Sbjct: 106 PLAALQLFRSAPSALALPHSARSYTAVLATLVSHSHLPLAHSLLADMRAG-GFAPTTATY 164
Query: 177 NTII--YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
N ++ + + + AV +F RN+ +P SYN + R + +
Sbjct: 165 NVLLKAHCSDASAPIEDAVRLF------RNIP-KPDACSYNTVIDGLCRRSRRADAQEI- 216
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
F +MV +G+ P + + ++I ++DAL++F +MG + PN +Y
Sbjct: 217 -------FSEMVANGVAPTVVTYTTVINWLARDGCLDDALKMFDEMGRI-GIAPNVVTYS 268
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GLC GR +A EL D M ++ +P++ +Y+S+++ L + E ++ L M +
Sbjct: 269 SLIDGLCKGGRAASALELLDRMAKEAKLPNTITYSSVINGLCKEDRLNEAMEVLDRMRLQ 328
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
R D + ++ +C GRA EA L E+
Sbjct: 329 GRKPDAGLFGKLIVGLCGAGRAVEAANYLDEM 360
>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 484
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 13/298 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YNALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 229 GYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMING 194
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
+ K ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 195 YYRVKK--------MEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKVGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 14/268 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +T++ + L E + + +++L C +N I + L RAV +
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKR-GVCPNLFTFNIFIQGLCKEGSLDRAVRL 352
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ RP + +YN + + + +E CL K MVN G EP+ F
Sbjct: 353 LGCVSRE---GLRPDVVTYNTVICGLCRKSR-------VVEAEECLHK-MVNGGFEPNDF 401
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NS+I GY V DA RI V + P+ F+Y L++G C G A + +
Sbjct: 402 TYNSIIDGYCKKGMVVDANRILKD-AVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
KG PS YN+L+ L G + ++ + EM EK D TY +++ +C+ G
Sbjct: 461 GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGC 520
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+A L+ + K I D +TY L+D
Sbjct: 521 LSDANHLIGDAITKGCIPDIFTYNTLVD 548
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 15/234 (6%)
Query: 161 NQMLATPSFCG---TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
N++L F G E Y +++ F + +A+ VFK + RPSI YN L
Sbjct: 420 NRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFK---DGLGKGLRPSIIVYNTL 476
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+G + + ++ L +M G +PDI++ N +I G ++DA +
Sbjct: 477 IKGLCQQG-------LILPALQ-LMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLI 528
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+ +P+ F+Y+ L+ G C Q + +A EL + M +G P +YN+L++ L
Sbjct: 529 GD-AITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCK 587
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ EE ++ M EK + ITY T+++ +C + EA+ LL E+++K L
Sbjct: 588 TAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 148/343 (43%), Gaps = 50/343 (14%)
Query: 97 ELPPRFNNEELCNVMTLQ-EDPLVCLELFNWASKQPR-FRHDASTYHIMTRKLGAAKMYQ 154
++ R + +L +V ++ ED VC+ K + F+H TY M +KLG +
Sbjct: 79 KMEGRRTDRDLVDVFCMKYED--VCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFN 136
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
EM++++++M + E +Y + F+ K+ AV F+ M C PS+ SY
Sbjct: 137 EMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMD---LFNCDPSVYSY 193
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N + + G + VYM +M + +E D+++ IK + + AL
Sbjct: 194 NAIMNILVEFGYFNQAHKVYM--------RMKDKKVESDVYTYTIRIKSFCRTGRPYAAL 245
Query: 275 RIFHQMGVV----------------YNY------------------LPNSFSYDYLIHGL 300
R+ M V+ Y + P+ +++ L+H L
Sbjct: 246 RLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHAL 305
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G + L D++ ++G P+ ++N + L G ++ V+ L + + D
Sbjct: 306 CKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDV 365
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+TY TV+ +CR+ R EA + L ++ N + +TY ++D
Sbjct: 366 VTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIID 408
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YNT+I + + A+ + M C+P I +YN++ G + NH
Sbjct: 472 VYNTLIKGLCQQGLILPALQLMNEMAEK---GCKPDIWTYNLIINGLCKMGCLSDANH-- 526
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
L + G PDIF+ N+++ GY ++ A+ + ++M P+ +Y+
Sbjct: 527 ------LIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWS-QGMTPDVITYN 579
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L++GLC +++ E+ M KG P+ +YN+++ +L + +V E V L EM K
Sbjct: 580 TLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSK 639
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
D +++ T++ C+ G A L + ++ +
Sbjct: 640 GLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQ 674
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 17/241 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL-SRGKNTYINHVY 234
YNT++ + K + +FK M C P+I +YN + + S+ N ++
Sbjct: 578 YNTLLNGLCKTAKSEEVMEIFKAMTEK---GCAPNIITYNTIIESLCNSKKVNEAVD--- 631
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
L +M + G+ PD+ S ++I G+ ++ A +F M Y+ + +Y+
Sbjct: 632 ------LLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYN 685
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I Q K A L EMK+ G P + +Y L+ G V + K L E IEK
Sbjct: 686 IIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEK 745
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNSIRH 414
T+ VL+ +C + EA+ ++ + K+++ T + E D I +
Sbjct: 746 GFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVNT----IFEADKKGHITY 801
Query: 415 H 415
H
Sbjct: 802 H 802
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 10/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ ++NI G ++ L + +G+ PD+ + N++I G +
Sbjct: 328 PNLFTFNIFIQGLCKEGS--------LDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKS 379
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V +A H+M V + PN F+Y+ +I G C +G +A + + KGF P +Y
Sbjct: 380 RVVEAEECLHKM-VNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTY 438
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
SLV+ +G+ ++ + + + K I Y T++ +C++G A++L+ E+
Sbjct: 439 CSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAE 498
Query: 389 KNL-IDGYTYTKLLDVL 404
K D +TY +++ L
Sbjct: 499 KGCKPDIWTYNLIINGL 515
>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 484
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 13/298 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YNALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 229 GYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L M P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 63/344 (18%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
++ +Q+D L+ LE FNWA + H T+ I+ L + ++ + ++ +L
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGV 147
Query: 170 ----------------C-GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
C T +++++ FA +K A F MK+ L P++
Sbjct: 148 DLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFL---PTVE 204
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
S N ++ L +G+ Y E RC I P+ ++LN ++ GY S ++
Sbjct: 205 SCNAYMSSLLGQGRVDIALRFYREMRRC--------KISPNPYTLNMVMSGYCRSGKLDK 256
Query: 273 ALRIFHQM--------GVVYNYL--------------------------PNSFSYDYLIH 298
+ + M V YN L PN +++ LIH
Sbjct: 257 GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G C + + A ++ EMK P++ +YN+L++ + G+ E + +M+
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQR 376
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D +TY ++ +C++ + +A + +KEL +NL+ + T++ L+
Sbjct: 377 DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I+ F A KL A VF MK + P+ +YN L + +G +
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKA---VNVAPNTVTYNTLINGYSQQGDH-------- 359
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E ++ MV +GI+ DI + N++I G A + ++ N +PNS ++
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK-ENLVPNSSTFSA 418
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C + EL M R G P+ +++N LVSA N + + + L EM+ +
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
P+D T V + + +G+ KLL+E++ K +
Sbjct: 479 IPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 128/263 (48%), Gaps = 47/263 (17%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
L+N ++ F +L A VF M+ S +P++ ++N L + + R ++
Sbjct: 188 LFNVLMRDFVRLGELVSARKVFDEMRRS----VQPTVVTFNTLISG-MCRARD------- 235
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV--------- 282
++ + L+K+M + G++PD+++ ++IKG+ + + +A+++F++M GV
Sbjct: 236 LDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTT 295
Query: 283 ----------------------VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
V +P+ +Y+ L++GLC K A + +EMK G
Sbjct: 296 LIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG 355
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P +Y +L+ +G+++ + +M EK+ +D +TY ++ + + GR +A
Sbjct: 356 LKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAE 415
Query: 381 KLLKELQNKNL-IDGYTYTKLLD 402
++L+E+ L D TYT ++D
Sbjct: 416 RVLREMMEAALEPDNTTYTMVID 438
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 57/294 (19%)
Query: 147 LGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
+ A K++ EM V + T +NT+I AR L ++K M + +
Sbjct: 203 VSARKVFDEMRRSVQPTVVT---------FNTLISGMCRARDLDAVDGLYKEMSD---VG 250
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
+P + +Y L F G+ ME +F +M + G+ P+ ++I +
Sbjct: 251 VKPDVYTYGALIKGFCRTGR--------MENAVKMFNEMRDTGVNPNAVVFTTLIDAHCK 302
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+VN + ++ M V +P+ +Y+ L++GLC K A + +EMK G P
Sbjct: 303 EGNVNAGMDLYQDMRV-RGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKV 361
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQ-------------------RPVDF------- 360
+Y +L+ +G+++ + +M EK+ RPVD
Sbjct: 362 TYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREM 421
Query: 361 ---------ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
TY V+D CR+G KLLKE+QNK G TY +++ L
Sbjct: 422 MEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGL 475
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 23/256 (8%)
Query: 149 AAKMYQEMDDV-VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
A KM+ EM D VN ++ T+I + ++ + +++ M R
Sbjct: 274 AVKMFNEMRDTGVNP---------NAVVFTTLIDAHCKEGNVNAGMDLYQDM---RVRGV 321
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
P + +YN L L R +N ++ + ++M N G++PD + ++I G
Sbjct: 322 MPDLVAYNALVNG-LCRARN-------LKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKD 373
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++ A+ I +M L + +Y LI GL GR +A + EM P + +
Sbjct: 374 GKLDMAMDIKQKMAEKEVSL-DEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTT 432
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y ++ A G+V+ K L EM K + +TY +++ +C+ G+ A LL +
Sbjct: 433 YTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAML 492
Query: 388 NKNL-IDGYTYTKLLD 402
N + D TY LLD
Sbjct: 493 NIGVSPDDITYNILLD 508
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 14/229 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ AR L A + + MKN+ +P +Y L GK +
Sbjct: 328 YNALVNGLCRARNLKAAESIVEEMKNA---GLKPDKVTYTTLIDGCCKDGK--------L 376
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + ++M + D + ++I G + DA R+ +M + P++ +Y
Sbjct: 377 DMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREM-MEAALEPDNTTYTM 435
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I C +G K +L EM+ KG P +YN +++ L G+++ L M+
Sbjct: 436 VIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIG 495
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
D ITY +LD C+ G+ + +L E + D YT L+ L
Sbjct: 496 VSPDDITYNILLDGQCKHGKVANSEEL--ESSKGMVPDFAVYTSLISEL 542
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
K+ MD + Q +A E Y +I ++A + A V + M + P
Sbjct: 374 GKLDMAMD--IKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEA---ALEP 428
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+Y ++ AF +G ++T L K+M N G +P + + N ++ G
Sbjct: 429 DNTTYTMVIDAFCRKGD--------VKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQ 480
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ +A + H M + P+ +Y+ L+ G C G+ N+ EL KG VP Y
Sbjct: 481 MKNADMLLHAM-LNIGVSPDDITYNILLDGQCKHGKVANSEEL---ESSKGMVPDFAVYT 536
Query: 330 SLVSALA 336
SL+S LA
Sbjct: 537 SLISELA 543
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 135 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRXGDLDEGFXLKSXMLASG-- 188
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 189 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLVPNGVTFTTLIDGHC 239
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A L DEM KG P
Sbjct: 240 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 298
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L++ G+++ ++ MI++ +D + Y ++ C+ GR+ +A K+L+E
Sbjct: 299 ITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLRE 358
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 359 MLSVGLKPDARTYTMIIN 376
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 19/245 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 88 FDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGD--------I 139
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + G+ P + S N+++ GYI +++ + M + P+ ++Y
Sbjct: 140 RVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXM-LASGVQPDVYTYSV 198
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM KG VP+ ++ +L+ NG V+ ++ +M+ +
Sbjct: 199 LINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 258
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSI 412
D ITY T++ +C++G +A L+ E+ K L D TYT L++ E D ++
Sbjct: 259 LSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLDSAF 318
Query: 413 RHHLR 417
H R
Sbjct: 319 EHRKR 323
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 15/271 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
R D TY ++ L E + ++ L YN++I + + +
Sbjct: 595 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE-LQEKGLLPNAFTYNSLISGSCKQGNVDK 653
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A + + M P I +YNIL G+ +E + LF + G+
Sbjct: 654 ASQLLEEMCIKG---INPDIVTYNILIDGLCKAGE--------IERAKNLFDDIEGRGLT 702
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P+ + +M+ GY S + A ++ +M ++ P++F Y+ +++ C + + + A +
Sbjct: 703 PNCVTYAAMVDGYCKSKNPTAAFQLLEEM-LLRGVPPDAFIYNVILNFCCKEEKFEKALD 761
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L EM KGF S+ S+N+L+ +G+++E L EMIEKQ + +TY +++D C
Sbjct: 762 LFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 820
Query: 372 RRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ G GEA +L E+Q +N++ TYT LL
Sbjct: 821 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 851
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 124/274 (45%), Gaps = 19/274 (6%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT---EALYNTIIYFFAEARK 188
R R +A TY A + D N+ML+ CG +Y +I +
Sbjct: 525 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLS----CGVLPNVGIYTALIEGHCKEGN 580
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
++ A VF+++ + R L+ +++Y++L GK M +F ++
Sbjct: 581 VTEAFSVFRFILSRRVLQ---DVQTYSVLIHGLSRNGK--------MHEAFGIFSELQEK 629
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+ P+ F+ NS+I G +V+ A ++ +M + P+ +Y+ LI GLC G +
Sbjct: 630 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEM-CIKGINPDIVTYNILIDGLCKAGEIER 688
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A+ L D+++ +G P+ +Y ++V + + L EM+ + P D Y +L+
Sbjct: 689 AKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILN 748
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLD 402
C+ + +A+ L +E+ K ++ L++
Sbjct: 749 FCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIE 782
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 22/234 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I F +A+++ A M R RP+ +Y + G+ M
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEMLERR---LRPNAHTYGAFIDGYSKAGE--------M 546
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E F +M++ G+ P++ ++I+G+ +V +A +F + + L + +Y
Sbjct: 547 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI-LSRRVLQDVQTYSV 605
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL G+ A + E++ KG +P++ +YNSL+S G V++ + L EM K
Sbjct: 606 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 665
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTK 399
D +TY ++D +C+ G A L +++ + L +DGY +K
Sbjct: 666 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 116/263 (44%), Gaps = 45/263 (17%)
Query: 177 NTIIY--FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
N++I+ RK+ V +N E RPS+ S N L L K
Sbjct: 144 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNK-------- 195
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNY 286
+E +F M + PD+++ +MI + +V DA R+ +MG V YN
Sbjct: 196 VELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNV 255
Query: 287 L--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+ P+ ++YD LI+G C + R++ A+ + EM G
Sbjct: 256 IIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 315
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P +YN+L+ G++E+ + EM+ + I + T+L+ +C+ G+ +A+
Sbjct: 316 LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL 375
Query: 381 KLLKELQNKNL-IDGYTYTKLLD 402
++++E+ K + D TY+ L++
Sbjct: 376 EIMQEMMEKGVEPDSQTYSLLIE 398
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF++M+ G + S N++I+GY S + +A + +M + ++PN +Y LI
Sbjct: 762 LFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEM-IEKQFIPNHVTYTSLIDHN 819
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G A+ L EM+ + +P++K+Y SL+ G + E EM+ K D
Sbjct: 820 CKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 879
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+TY ++D CR G EA KL E+ K +
Sbjct: 880 MTYYVMIDAYCREGNVMEACKLKDEILVKGM 910
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 113/261 (43%), Gaps = 46/261 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN II AR L A+ + + M + + P + +Y+IL F ++
Sbjct: 253 YNVIIGGLCRARLLDEAIELKRSMVDKGLV---PDLYTYDILINGFCMEKRS-------- 301
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL 287
+ + +M++ G++P+ + N++I G++ + A RI +M +++N L
Sbjct: 302 REAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTL 361
Query: 288 --------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
P+S +Y LI G C A EL DEMK++
Sbjct: 362 LNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL 421
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P+ +Y+ +++ L G ++ T L EM+ + + Y T++ + GR E+
Sbjct: 422 APTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 481
Query: 382 LLKELQNKNLI-DGYTYTKLL 401
+L+ ++ + ++ D + Y L+
Sbjct: 482 ILERMREQGILPDVFCYNSLI 502
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN I+ F + K +A+ +F+ M + S S+N L + GK NH
Sbjct: 742 IYNVILNFCCKEEKFEKALDLFQEMLE----KGFASTVSFNTLIEGYCKSGKLQEANH-- 795
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
L ++M+ P+ + S+I + + +A R++ +M N +P + +Y
Sbjct: 796 ------LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE-RNVMPTAKTYT 848
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+HG G L +EM KG P +Y ++ A G V E K E++ K
Sbjct: 849 SLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVK 908
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
P+ Y ++ +C++ E +KLL E+
Sbjct: 909 GMPMSVAAYDALIQALCKKEEFFEVLKLLNEI 940
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 122/295 (41%), Gaps = 39/295 (13%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY+++ L A++ E ++ M+ P + L N F E R + +
Sbjct: 252 TYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILING---FCMEKRSREAKLML 308
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTYINH 232
+ + ++ +P +YN L F+ +G NT +N
Sbjct: 309 LEMI----DVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNG 364
Query: 233 V----YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
V ME + ++M+ G+EPD + + +I+G+ ++ A + +M P
Sbjct: 365 VCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK-RKLAP 423
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+Y +I+GLC G + + EM G P++ Y +L++A A G VEE+ L
Sbjct: 424 TVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 483
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
M E+ D Y +++ C+ R EA L E+ + L + +TY +D
Sbjct: 484 ERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFID 538
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 103/246 (41%), Gaps = 29/246 (11%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKM--------------YQEMDDVVNQMLATPS 168
+ N+ K+ +F + M K A+ + QE + ++ +M+
Sbjct: 746 ILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEK-Q 804
Query: 169 FCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
F Y ++I +A + A ++ M+ RN+ P+ ++Y L + + G
Sbjct: 805 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ-ERNV--MPTAKTYTSLLHGYHNIGN-- 859
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
M + LF++MV GIEPD + MI Y +V +A ++ + ++ +P
Sbjct: 860 ------MSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDE--ILVKGMP 911
Query: 289 NSFS-YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
S + YD LI LC + +L +E+ GF + + + + G ++E +
Sbjct: 912 MSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEV 971
Query: 348 LWEMIE 353
L M++
Sbjct: 972 LRSMVK 977
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ + + Y I+ EM D++N M+ ++N I +A+ + A
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN-GLSPDHHIFNIIFTAYAKKAMIDEA 397
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+++F MK P + ++ L A G+ ++ ++ F QM+N+G+ P
Sbjct: 398 MHIFNKMKQQ---GLSPDVVNFGALIDALCKLGR---VDDAVLK-----FNQMMNEGVAP 446
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+IF NS++ G + A + +M + P+ ++ ++ LC +G+ A+ L
Sbjct: 447 NIFVFNSLVYGLCTVDKWEKAKEFYFEM-LNQGIRPDVVFFNTILCNLCTKGQVMKAQRL 505
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M+R G P SY +L+ L G ++E K+L M+ D TY T+L CR
Sbjct: 506 IDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCR 565
Query: 373 RGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
GR +A + +E+ + G TY+ +L
Sbjct: 566 AGRIDDAYGVFREMLRNGITPGVVTYSTIL 595
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 124/286 (43%), Gaps = 34/286 (11%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEAL--YNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
A ++ + MD ++ +M P T + YNT++ F ++ A+ + M +S+
Sbjct: 142 AKRLREAMDILIKRM---PELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRS 198
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETI---------------------------R 239
C P++ SY + F + G+ ++++E +
Sbjct: 199 CPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAE 258
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+F+QM++ G++PD + N +I GY+ + +R+ +M + P+ ++Y L++
Sbjct: 259 GVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMS-AHGLKPDCYTYGSLLNY 317
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC GR + AR D M RKG P+ Y L+ A G + E L M+E D
Sbjct: 318 LCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPD 377
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ + ++ EAM + +++ + L D + L+D L
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDAL 423
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 28/258 (10%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N ++ +A++L A+ + +K L C P + SYN L F + + E
Sbjct: 133 NQLLKGLCDAKRLREAMDIL--IKRMPELGCTPDVVSYNTLLKGFCNEKRAE-------E 183
Query: 237 TIRCLFKQMVNDG--IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+ L + G P++ S ++I G+ V+ A +F +M + PN +Y
Sbjct: 184 ALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEM-MDRGIQPNVVTYT 242
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I GLC A + +M KG P + +YN L+ G+ +E V+ L EM
Sbjct: 243 TVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAH 302
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVL 404
D TY ++L+ +C GR EA + K LI GY L +
Sbjct: 303 GLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEM 362
Query: 405 ED------DFGNSIRHHL 416
D + G S HH+
Sbjct: 363 HDLLNLMVENGLSPDHHI 380
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 16/239 (6%)
Query: 156 MDDVV---NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
+DD V NQM+ ++N+++Y K +A + M N RP +
Sbjct: 429 VDDAVLKFNQMM-NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ---GIRPDVV 484
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+N + ++G+ M+ R L M G PD+ S ++I G+ L +++
Sbjct: 485 FFNTILCNLCTKGQ-------VMKAQR-LIDLMERVGTRPDVISYTTLIGGHCLVGRIDE 536
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A + M V P+ ++Y+ L+HG C GR +A + EM R G P +Y++++
Sbjct: 537 AAKSLDVMLSV-GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTIL 595
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
L E + MI + + Y +L+ + + EA KL + L +K+
Sbjct: 596 HGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDF 654
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 102/225 (45%), Gaps = 13/225 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+NTI+ ++ +A + M+ + RP + SY L G+
Sbjct: 484 VFFNTILCNLCTKGQVMKAQRLIDLMER---VGTRPDVISYTTLIGGHCLVGRID----- 535
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
E + L M++ G++PD ++ N+++ GY + ++DA +F +M + P +Y
Sbjct: 536 --EAAKSL-DVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREM-LRNGITPGVVTY 591
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
++HGL R A+EL M G + YN +++ L+ N V+E K +
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
K ++ T+ ++ + + GR +AM L + + L+ D +TY
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTY 696
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 12/214 (5%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
V +F M ++ P + +Y+IL F G+ +E F ++ G
Sbjct: 75 VVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGR--------LEHGFATFGLILKSGWR 126
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+ +N ++KG + + +A+ I + P+ SY+ L+ G C + R + A E
Sbjct: 127 VNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALE 186
Query: 312 LCDEM---KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
L M + + P+ SY ++++ G+V++ EM+++ + +TY TV+D
Sbjct: 187 LLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVID 246
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+C+ A + +++ +K + D TY L+
Sbjct: 247 GLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLI 280
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 93/222 (41%), Gaps = 13/222 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D TY+ + A + V +ML G Y+TI++ R+ S A
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV-VTYSTILHGLFTTRRFSEA 607
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
++ M S + +I YNI+ KN ++ + LF+ + + +
Sbjct: 608 KELYLNMITSGK---QWNIWIYNIILNGL---SKNNCVDEAFK-----LFQSLCSKDFQL 656
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+I + N MI S DA+ +F + Y +P+ F+Y + L +G + +L
Sbjct: 657 EITTFNIMIGALFKSGRNEDAMHLFATISS-YGLVPDVFTYCLIAENLIEEGYLEEFDDL 715
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
M++ G P+S+ N+LV L G++ L ++ EK
Sbjct: 716 FSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEK 757
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 25/293 (8%)
Query: 121 LELFN-WASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT---PSFCGTEALY 176
L+LFN W SK DA TY+ + L ++E D++ +M P C T Y
Sbjct: 319 LKLFNTWISKGKAI--DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPD-CYT---Y 372
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N I+ A+A + F+ ++ +P + + NIL + G ++
Sbjct: 373 NAILCALADAEGQVEKAFQFRNKMVEKSF--KPDLFTCNILLRGLCTEG--------MLD 422
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
LF ++ G D + N++I G +A + +M +P+ +Y+ +
Sbjct: 423 NALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTI 482
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK--NLWEMIEK 354
I G C +G+ + A + ++M K F P + N L+ L G + + +K N W I K
Sbjct: 483 ILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTW--ISK 540
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
+ +D +TY T++ +C+ GR EA LL E++ K L D YTY +L L D
Sbjct: 541 GKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALAD 593
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 110/247 (44%), Gaps = 53/247 (21%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN-ILFTAFLSRG 225
PS C ++A++ +I F + KLS A+ + MK+ C P SYN IL +L R
Sbjct: 187 PSVCLSKAIFTNVIKFGVK-NKLSEAIGLIGKMKD---FSCFPDNASYNTILDVLWLCRS 242
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
T + I LN +++ G+V
Sbjct: 243 GKT----------------------DQSIDKLNELLES-----------------GLV-- 261
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+ +Y+ +IHG C +G+ + A + ++M K F P + N L+ L G ++ +
Sbjct: 262 --PHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNAL 319
Query: 346 K--NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
K N W I K + +D +TY T++ +C+ GR EA LL E++ K L D YTY +L
Sbjct: 320 KLFNTW--ISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILC 377
Query: 403 VLEDDFG 409
L D G
Sbjct: 378 ALADAEG 384
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 12/213 (5%)
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL 189
+ F+ D T +I+ R L M + N ++ YNTII + +
Sbjct: 398 EKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDA-VTYNTIISGLCKEGRF 456
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A + M+ L P +YN + + G+ +E +MV
Sbjct: 457 EEAFDLLAEMEEKNGL--VPDQTTYNTIILGYCREGQ--------VEKAFQFRNKMVEKS 506
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+PD+F+ N +++G + AL++F+ + ++ +Y+ +I GLC +GR + A
Sbjct: 507 FKPDLFTCNILLRGLCREGMLVKALKLFNTW-ISKGKAIDAVTYNTIISGLCKEGRFEEA 565
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+L EMK K P +YN+++ ALA G +E
Sbjct: 566 FDLLAEMKEKKLGPDCYTYNAILCALADAGRME 598
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 148/340 (43%), Gaps = 55/340 (16%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
++ +++D ++ E FNW Q TY I+ L ++ + V+ +L + S
Sbjct: 164 MLKIKKDHVLSFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGILGSGSI 223
Query: 170 CGTEALYNTIIY-----------------FFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
L+ I+Y +A+ +KL A+ VF MK+ L P +
Sbjct: 224 DHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFL---PRVE 280
Query: 213 SYNILFTAFLS--RG----------------KNTYINHVYM---------ETIRCLFKQM 245
S N +A +S RG N Y ++ M E +FK+M
Sbjct: 281 SCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRM 340
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALR---IFHQMGVVYNYLPNSFSYDYLIHGLCA 302
G P I S N++I GY +N ++ + + GV P+ +++ LI+G C
Sbjct: 341 ETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGV----RPDDVTFNTLINGFCR 396
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
G+ A ++ EMK VP++ +YN+L++ + G E + EM+ D +T
Sbjct: 397 GGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILT 456
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
Y ++ +C GR +A L+KEL +NL+ + T++ L+
Sbjct: 457 YNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALI 496
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 113/249 (45%), Gaps = 45/249 (18%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N ++ F + KL +A+ VFK M+ + P+I SYN L + ++G +
Sbjct: 318 NMVMCAFCKWGKLEKAIEVFKRMET---MGFSPTITSYNTLIAGYCNKG--------LLN 366
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNYLP 288
+ L M +G+ PD + N++I G+ +++A +IF +M + YN L
Sbjct: 367 SGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLI 426
Query: 289 NSFS--------------------------YDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
N +S Y+ LI GLC +GRTK A L E+ R+ V
Sbjct: 427 NGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLV 486
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P+S ++++L++ + E + MI ++ T++ ++ C+ A+++
Sbjct: 487 PNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEV 546
Query: 383 LKELQNKNL 391
++E+ +++
Sbjct: 547 VREMSERSI 555
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 21/235 (8%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+ +NT+I F KL A +F MK + + P+ +YN L + G +
Sbjct: 384 DVTFNTLINGFCRGGKLHEANKIFSEMKAN---DVVPNTITYNTLINGYSQVGNSEMGGR 440
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
++ E +R +GI+ DI + N++I G + A + ++ N +PNS +
Sbjct: 441 LHDEMLR--------NGIKADILTYNALILGLCMEGRTKKAAYLVKELDR-ENLVPNSST 491
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ LI G C + ++ A +L M R G P+ ++ L+S N + + V+ + EM
Sbjct: 492 FSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMS 551
Query: 353 EKQRPVDFITYRTVLDEICR----RGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
E+ D T L E+CR G+ A+KL KE++ K+L+ +G+ +K ++
Sbjct: 552 ERSIAPDSDT----LSELCRGLWLSGKEELALKLCKEMEMKHLMPEGFDKSKTIN 602
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 35/303 (11%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSR 191
+ ++ TY++M + E+D V +M S C + + YNT+I + + K+
Sbjct: 368 MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKM--EESGCLPDIVTYNTLISWHCKVGKMDE 425
Query: 192 AVYVFKYM-------------------------KNSRNLECRPSIRSYNILFTAFLSRGK 226
A + M + +L C R Y F +S G
Sbjct: 426 AFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGY---FVDEVSYGT 482
Query: 227 NT--YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
Y H L+ +M I P I + NSMI G N A+ ++ +
Sbjct: 483 LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL-LES 541
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
+P+ +Y+ +IHG C +G+ + A + ++M K F P + N+L+ L G +E+
Sbjct: 542 GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKA 601
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDV 403
+K I K + VD ++Y T++ +C+ R GEA LL+E++ K L D YTY +L
Sbjct: 602 LKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGG 661
Query: 404 LED 406
L D
Sbjct: 662 LTD 664
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 117/233 (50%), Gaps = 12/233 (5%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
++ L + I + + +A +F MK L +P++ + N L A + + +
Sbjct: 123 SKPLLDISIGAYVACGRPHQAAQIFNRMKR---LGMQPTLLTCNTLLNALVR-----FPS 174
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ + +F + G++ + S N +I G + N +A+R+ +M Y P++
Sbjct: 175 SHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRD-YGCPPDNI 233
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ ++ GLC +GR AR+L +MK KG P+ ++N LV G ++E N+ E+
Sbjct: 234 TYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAA-NVIEL 292
Query: 352 IEKQRPV-DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ + V D TY ++ C++GR EAM+L +E++N L D TY L++
Sbjct: 293 MSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLIN 345
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTI+ + +L+ A + MKN P+ ++NIL G ++
Sbjct: 235 YNTILDGLCKKGRLNEARDLLLDMKNKGLF---PNRTTFNILVVGCCRLG--------WL 283
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + M + + PD ++ N MI G+ + +A+R+ +M + P+ +Y+
Sbjct: 284 KEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENL-KLSPDVVTYNT 342
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G G ++ +L +EM+ +G P+S +YN +V G+++E K + +M E
Sbjct: 343 LINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESG 402
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +TY T++ C+ G+ EA +L+ E+ K L +D T +L L
Sbjct: 403 CLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRAL 452
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 15/259 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D T + M R L + E D++ F E Y T+I + + K S+A
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFV-DEVSYGTLIIGYFKHEKASQA 496
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIE 251
+ ++ MK E PSI +YN + GK N I+ + +++ G+
Sbjct: 497 LRLWDEMKEK---EIIPSIITYNSMIAGLCQMGKTNQAIDKL---------DELLESGLV 544
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD + N++I GY V A + FH V N+ P+ + + L+ GLC +G + A +
Sbjct: 545 PDEITYNTIIHGYCQEGQVEKAFQ-FHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALK 603
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L + KG + SYN+++ +L E L EM EK+ D TY +L +
Sbjct: 604 LFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLT 663
Query: 372 RRGRAGEAMKLLKELQNKN 390
GR +A + + ++ K
Sbjct: 664 DAGRMKDAEEFISKIAEKG 682
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P +YN++ + F +G+ E +R L ++M N + PD+ + N++I G
Sbjct: 300 PDAWTYNVMISGFCKQGR-------IAEAMR-LREEMENLKLSPDVVTYNTLINGCFEHG 351
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ ++ +M PNS +Y+ ++ +G+ + +M+ G +P +Y
Sbjct: 352 SSEEGFKLIEEMEG-RGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTY 410
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+S G+++E + + EM K +D +T T+L +CR + EA LL +
Sbjct: 411 NTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARR 470
Query: 389 KN-LIDGYTYTKLL 401
+ +D +Y L+
Sbjct: 471 RGYFVDEVSYGTLI 484
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC---AQGRTKNARELC 313
L+ I Y+ + A +IF++M + P + + L++ L + + ++ +
Sbjct: 127 LDISIGAYVACGRPHQAAQIFNRMKRL-GMQPTLLTCNTLLNALVRFPSSHSIRLSKAVF 185
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+ + G ++ S+N L+ + E ++ L +M + P D ITY T+LD +C++
Sbjct: 186 TDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKK 245
Query: 374 GRAGEAMKLLKELQNKNLIDGYTYTKLLDV 403
GR EA LL +++NK L T +L V
Sbjct: 246 GRLNEARDLLLDMKNKGLFPNRTTFNILVV 275
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 25/237 (10%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ M L + D ++++L + E YNTII+ + + ++ +A F++
Sbjct: 514 TYNSMIAGLCQMGKTNQAIDKLDELLES-GLVPDEITYNTIIHGYCQEGQVEKA---FQF 569
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+P + + N L G +E LF ++ G + D S N
Sbjct: 570 HNKMVEKNFKPDVVTCNTLLCGLCKEG--------MLEKALKLFNTWISKGKDVDAVSYN 621
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I +A + +M P+ ++Y+ ++ GL GR K+A E ++
Sbjct: 622 TIILSLCKEKRFGEAFDLLEEMEE-KKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAE 680
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
KG KS N + G+ ++ + E+ ++ P + I Y ++E+C +GR
Sbjct: 681 KG-----KSENQFLEL----GKRQDARTS--EIPQEPHP-NAIAYSNKINELCSQGR 725
>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 484
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 13/298 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YNALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 229 GYVSVDQVDDXLRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+D LR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKAGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 15/270 (5%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA K+ F+HD STY + R L A++Y EM + +++ + +
Sbjct: 108 VKIQFFKWAGKRRNFQHDCSTYMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSE 167
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
++ A+ +S+A+ VF K + C+P+ +YN + + G++ ++ VY E
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRK---CKPTSSTYNSVILMLMQEGQHEKVHEVYTE-- 222
Query: 239 RCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYL 296
M N+G PD + +++I Y + A+R+F +M N + P Y L
Sbjct: 223 ------MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK--DNCMQPTEKIYTTL 274
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ G+ + A +L +EMKR G P+ +Y L+ L G VEE M+
Sbjct: 275 LGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGL 334
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D + +++ + + GR E + E+
Sbjct: 335 TPDVVFLNNLMNILGKVGRLEELTNVFNEM 364
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 126/300 (42%), Gaps = 55/300 (18%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
S+Y + R A +++ EM D Q TE +Y T++ + + K+ +A+ +F+
Sbjct: 241 SSYEKLGRNDSAIRLFDEMKDNCMQ--------PTEKIYTTLLGIYFKVGKVEKALDLFE 292
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
MK + C P++ +Y L GK + Y L+K M+ DG+ PD+ L
Sbjct: 293 EMKRAG---CSPTVYTYTELIKGL---GKAGRVEEAY-----DLYKNMLTDGLTPDVVFL 341
Query: 258 NSMIKGYILSNHVNDALRIFHQMG--------VVYNYL---------------------- 287
N+++ + + +F++MG V YN +
Sbjct: 342 NNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMK 401
Query: 288 -----PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
P+ F+Y LI G C R + A L +EM KGF P +Y SL++AL E
Sbjct: 402 ADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ E+ E V Y ++ + G+ EA+ L E++N+ D Y Y L+
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 152 MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMK-NSRNLECRPS 210
+ +EMD+ F A Y ++I +A++ A +FK +K N N+ S
Sbjct: 431 LLEEMDE--------KGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV----S 478
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
R Y ++ F GK + LF +M N G PD+++ N+++ G + + V
Sbjct: 479 SRVYAVMIKHFGKCGK--------LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMV 530
Query: 271 NDA---LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
N+A LR + G + S++ +++G G + A E+ + MK G P +
Sbjct: 531 NEANSLLRKMEENGCT----ADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVT 586
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
YN+L+ A G EE + + EM +K D ITY ++LD +
Sbjct: 587 YNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAV 629
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 21/203 (10%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVYVF 196
+ Y + LG AK Y+ +++ ++ +F + +Y +I F + KLS AV +F
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKEL--KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLF 502
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
MKN + P + +YN L + + G N L ++M +G DI S
Sbjct: 503 NEMKNQGS---GPDVYAYNALMSGMVKAGMVNEANS--------LLRKMEENGCTADINS 551
Query: 257 LNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
N ++ G+ + A+ +F M G+ P+ +Y+ L+ G + A L
Sbjct: 552 HNIILNGFARTGVPRRAIEMFETMKHCGIK----PDGVTYNTLLGCFAHAGMFEEAARLM 607
Query: 314 DEMKRKGFVPSSKSYNSLVSALA 336
EMK KGF + +Y+S++ A+
Sbjct: 608 REMKDKGFEYDAITYSSILDAVG 630
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
MIK + +++A+ +F++M P+ ++Y+ L+ G+ G A L +M+
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKN-QGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEEN 543
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G S+N +++ A G ++ M D +TY T+L G EA
Sbjct: 544 GCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEA 603
Query: 380 MKLLKELQNKNL-IDGYTYTKLLDVL 404
+L++E+++K D TY+ +LD +
Sbjct: 604 ARLMREMKDKGFEYDAITYSSILDAV 629
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F E ++L +A+ + MK S C S+ ++ IL AF GK M
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSG---CSWSLVTWGILIDAFCKAGK--------M 228
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ K+M G+E D+ S+I+G+ ++ +F ++ + P + +Y+
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV-LERGDSPCAITYNT 287
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C G+ K A E+ + M +G P+ +Y L+ L G+ +E ++ L MIEK
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +TY +++++C+ G +A+++++ ++ + D TY LL L
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
A KM + M L F G EA +Y ++I F + +L R +F + +
Sbjct: 225 AGKMDEAM-----GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD- 278
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P +YN L F G+ + + F+ M+ G+ P++++ +I G
Sbjct: 279 --SPCAITYNTLIRGFCKLGQLKEASEI--------FEFMIERGVRPNVYTYTGLIDGLC 328
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+AL++ + M + + PN+ +Y+ +I+ LC G +A E+ + MK++ P +
Sbjct: 329 GVGKTKEALQLLNLM-IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQR--PVDFITYRTVLDEICRRGRAGEAMKLL 383
+YN L+ L G+++E K L+ M++ D I+Y ++ +C+ R +A+ +
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 384 KELQNK 389
L K
Sbjct: 448 DLLVEK 453
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 48/256 (18%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---LSRGK--NTYINHVYME- 236
F+ RK+ ++ S LEC +R F L RG N Y +++ ++
Sbjct: 92 FSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKG 151
Query: 237 ---TIRC-----LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG------- 281
+ C L ++M + + PD+FS N++I+G+ + AL + ++M
Sbjct: 152 LCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWS 211
Query: 282 -VVYNYLPNSFS--------------------------YDYLIHGLCAQGRTKNARELCD 314
V + L ++F Y LI G C G + L D
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
E+ +G P + +YN+L+ G+++E + MIE+ + TY ++D +C G
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 375 RAGEAMKLLKELQNKN 390
+ EA++LL + K+
Sbjct: 332 KTKEALQLLNLMIEKD 347
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEAR 187
K+ R R D TY+I+ L A E ++ ML S+ + + YN +I+ +
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L +A+ ++ + R + NIL + L G +N ME L+KQ+ +
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTT---NILLNSTLKAGD---VNKA-ME----LWKQISD 487
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
I + + +MI G+ + +N A + +M V P+ F Y+ L+ LC +G
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV-SELQPSVFDYNCLLSSLCKEGSLD 546
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A L +EM+R P S+N ++ G+++ L M D TY ++
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Query: 368 DEICRRGRAGEAMKLLKEL 386
+ + G EA+ ++
Sbjct: 607 NRFLKLGYLDEAISFFDKM 625
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 48/264 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN II + ++ AV + + MK R RP +YNIL ++G +
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRT---RPDNITYNILLGGLCAKGD--------L 403
Query: 236 ETIRCLFKQMVNDG--IEPDIFSLNSMIKGYILSNHVNDALRIF----HQMG----VVYN 285
+ L M+ D +PD+ S N++I G N ++ AL I+ ++G V N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 286 YLPNSF--------------------------SYDYLIHGLCAQGRTKNARELCDEMKRK 319
L NS +Y +I G C G A+ L +M+
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
PS YN L+S+L G +++ + EM D +++ ++D + G A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 380 MKLLKELQNKNLI-DGYTYTKLLD 402
LL + L D +TY+KL++
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 250 IEPDIF----SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
+E D F SL+ +++ Y+ A + M + + N ++++ L+ GLC
Sbjct: 99 LETDTFINFVSLSGLLECYVQMRKTGFAFGVLALM-LKRGFAFNVYNHNILLKGLCRNLE 157
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A L EM+R +P SYN+++ E+E+ ++ EM +T+
Sbjct: 158 CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++D C+ G+ EAM LKE++ L D YT L+
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 103/263 (39%), Gaps = 26/263 (9%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ---------EMDDVVNQM-----LATPS 168
L + K+ R Y ++ KLGA + DV M ++
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 169 FCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
Y +I F + L+ A + M+ S E +PS+ YN L ++ G
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS---ELQPSVFDYNCLLSSLCKEGS-- 544
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
++ LF++M D PD+ S N MI G + + + A + M P
Sbjct: 545 ------LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA-GLSP 597
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ F+Y LI+ G A D+M GF P + +S++ GE ++ + +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657
Query: 349 WEMIEKQRPVDFITYRTVLDEIC 371
++++K +D TV+D +C
Sbjct: 658 KKLVDKDIVLDKELTCTVMDYMC 680
>gi|15222753|ref|NP_175959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75140283|sp|Q7X6A5.1|PPR81_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g55630
gi|30793841|gb|AAP40373.1| unknown protein [Arabidopsis thaliana]
gi|30794021|gb|AAP40457.1| unknown protein [Arabidopsis thaliana]
gi|110739296|dbj|BAF01561.1| hypothetical protein [Arabidopsis thaliana]
gi|332195155|gb|AEE33276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 477
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 32/296 (10%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
+ F W Q FRH A+ YH++ + Y+ M ++++M+ + T +N +I
Sbjct: 137 KFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK-DGYPTTACTFNLLIC 195
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC- 240
EA L+R V V +++K S+ RP SYN + + L + I+ VY + +
Sbjct: 196 TCGEA-GLARDV-VEQFIK-SKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDG 252
Query: 241 --------------------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
L +MV DG PD+++ N ++ N AL
Sbjct: 253 FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+ + M V P + LI GL G+ + + DE + G P Y +++
Sbjct: 313 NLLNHMREV-GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
GE+E+ + EM EK + + TY +++ C G+ EA LLKE++++
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 24/248 (9%)
Query: 122 ELFNWASKQ---PRFRHDASTYHIM---TRKLGAA-KMYQEMDDVVNQMLATPSFCGTEA 174
+L +W +Q F D TY+I+ +LG ++Y+ +D++V + +
Sbjct: 239 KLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLY----- 293
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
YN +++ A K A+ + +M R + P + + L GK
Sbjct: 294 TYNILLHHLATGNKPLAALNLLNHM---REVGVEPGVIHFTTLIDGLSRAGK-------- 342
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E + + V G PD+ MI GYI + A +F +M LPN F+Y+
Sbjct: 343 LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEM-TEKGQLPNVFTYN 401
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I G C G+ K A L EM+ +G P+ Y++LV+ L G+V E + + +M+EK
Sbjct: 402 SMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Query: 355 QRPVDFIT 362
V I+
Sbjct: 462 GHYVHLIS 469
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +M+ DG + N +I + D + F + +NY P SY+ ++H L
Sbjct: 174 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIK-SKTFNYRPYKHSYNAILHSL 232
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ K + ++M GF P +YN ++ A G+ + + L EM++ D
Sbjct: 233 LGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 292
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT-YTKLLDVL 404
TY +L + + A+ LL ++ + G +T L+D L
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 15/271 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
R D TY ++ L E + ++ L YN++I + + +
Sbjct: 586 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE-LQEKGLLPNAFTYNSLISGSCKQGNVDK 644
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A + + M P I +YNIL G+ +E + LF + G+
Sbjct: 645 ASQLLEEMCIKG---INPDIVTYNILIDGLCKAGE--------IERAKNLFDDIEGRGLT 693
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P+ + +M+ GY S + A ++ +M ++ P++F Y+ +++ C + + + A +
Sbjct: 694 PNCVTYAAMVDGYCKSKNPTAAFQLLEEM-LLRGVPPDAFIYNVILNFCCKEEKFEKALD 752
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L EM KGF S+ S+N+L+ +G+++E L EMIEKQ + +TY +++D C
Sbjct: 753 LFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNC 811
Query: 372 RRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ G GEA +L E+Q +N++ TYT LL
Sbjct: 812 KAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 842
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 27/245 (11%)
Query: 177 NTIIY--FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
N++I+ RK+ V +N E RPS+ S N L L K
Sbjct: 153 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNK-------- 204
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG------------- 281
+E +F M + PD+++ +MI + +V DA R+ +MG
Sbjct: 205 VELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELK 264
Query: 282 ---VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
V +P+ ++YD LI+G C + R++ A+ + EM G P +YN+L+
Sbjct: 265 RSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQ 324
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTY 397
G++E+ + EM+ + I + T+L+ +C+ G+ +A+++++E+ K + D TY
Sbjct: 325 GDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTY 384
Query: 398 TKLLD 402
+ L++
Sbjct: 385 SLLIE 389
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 124/274 (45%), Gaps = 19/274 (6%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT---EALYNTIIYFFAEARK 188
R R +A TY A + D N+ML+ CG +Y +I +
Sbjct: 516 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLS----CGVLPNVGIYTALIEGHCKEGN 571
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
++ A VF+++ + R L+ +++Y++L GK M +F ++
Sbjct: 572 VTEAFSVFRFILSRRVLQ---DVQTYSVLIHGLSRNGK--------MHEAFGIFSELQEK 620
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+ P+ F+ NS+I G +V+ A ++ +M + P+ +Y+ LI GLC G +
Sbjct: 621 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEM-CIKGINPDIVTYNILIDGLCKAGEIER 679
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A+ L D+++ +G P+ +Y ++V + + L EM+ + P D Y +L+
Sbjct: 680 AKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILN 739
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLD 402
C+ + +A+ L +E+ K ++ L++
Sbjct: 740 FCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIE 773
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 22/234 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I F +A+++ A M R RP+ +Y + G+ M
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLERR---LRPNAHTYGAFIDGYSKAGE--------M 537
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E F +M++ G+ P++ ++I+G+ +V +A +F + + L + +Y
Sbjct: 538 EIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI-LSRRVLQDVQTYSV 596
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL G+ A + E++ KG +P++ +YNSL+S G V++ + L EM K
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 656
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTK 399
D +TY ++D +C+ G A L +++ + L +DGY +K
Sbjct: 657 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF++M+ G + S N++I+GY S + +A + +M + ++PN +Y LI
Sbjct: 753 LFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEM-IEKQFIPNHVTYTSLIDHN 810
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G A+ L EM+ + +P++K+Y SL+ G + E EM+ K D
Sbjct: 811 CKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 870
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+TY ++D CR G EA KL E+ K +
Sbjct: 871 MTYYVMIDAYCREGNVMEACKLKDEILVKGM 901
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P +YN L F+ +G + E + C GIE ++ N+++ G +
Sbjct: 308 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC--------GIEANLIIWNTLLNGVCKA 359
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ AL I +M + P+S +Y LI G C A EL DEMK++ P+ +
Sbjct: 360 GKMEKALEIMQEM-MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLT 418
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y+ +++ L G ++ T L EM+ + + Y T++ + GR E+ +L+ ++
Sbjct: 419 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 478
Query: 388 NKNLI-DGYTYTKLL 401
+ ++ D + Y L+
Sbjct: 479 EQGILPDVFCYNSLI 493
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN I+ F + K +A+ +F+ M + S S+N L + GK NH
Sbjct: 733 IYNVILNFCCKEEKFEKALDLFQEMLE----KGFASTVSFNTLIEGYCKSGKLQEANH-- 786
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
L ++M+ P+ + S+I + + +A R++ +M N +P + +Y
Sbjct: 787 ------LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE-RNVMPTAKTYT 839
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+HG G L +EM KG P +Y ++ A G V E K E++ K
Sbjct: 840 SLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVK 899
Query: 355 QRPV 358
P+
Sbjct: 900 GMPM 903
>gi|225462369|ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Vitis vinifera]
Length = 393
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 141/306 (46%), Gaps = 19/306 (6%)
Query: 98 LPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD 157
L PR E+ + +P + + + SK+ F+ + + Y ++ KL A+M+ ++
Sbjct: 50 LSPR----EVLKIFDGLRNPESVMPVLDSVSKRKDFKPNEALYTLVINKLAQARMFDAIE 105
Query: 158 DVVNQMLATPSFCGTEAL--YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
DV+ + L C + YN I + A + RAV M C PS++++N
Sbjct: 106 DVI-KTLKIDKQCRLSDVFFYNVIKVYGNVAGQPDRAVETLFDMPK---FHCWPSVKTFN 161
Query: 216 ILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
++ +S + ++ VY G+E D LN ++KG S +V+ A
Sbjct: 162 LVLNMLVSAKRFDVVHKVYAGAPEL--------GVEIDACCLNILVKGLCRSGNVDAACE 213
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+ + PN ++ L+HGLC GR + A L + M+R+G P + +N L+S L
Sbjct: 214 LLDEYPK-QRCRPNVRTFSTLMHGLCESGRVEGALGLLERMEREGVYPDTVVFNILISGL 272
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY 395
G VEE ++ L M K + +Y+ VL + GR G+A + + ++ ++ + +
Sbjct: 273 RKRGRVEEGMELLGRMKLKGCYPNAGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSF 332
Query: 396 TYTKLL 401
K++
Sbjct: 333 VSYKMM 338
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR--PSIRSYNILFTAFLSRGKNTYINH 232
L+N+++ ++R S+A + R LE R P + +YN L + R K+T
Sbjct: 172 LFNSLLDALGKSRHASKAASLV------RALERRFPPDVVTYNTLADGW-CRVKDT---- 220
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM----GVVYNYLP 288
L +QM GI P + N ++KG+ + + A F QM N P
Sbjct: 221 ---SRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKP 277
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ SY +IHGL G+ AR+L DEM ++G P+ +YN+L+ + G VE+ V
Sbjct: 278 DVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVF 337
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+MI K + +TY ++ +C G+ AMKL++ ++N+
Sbjct: 338 DDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEG 379
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 124/268 (46%), Gaps = 16/268 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
RF D TY+ + K D++ QM A T+ YN I+ F A +L
Sbjct: 199 RFPPDVVTYNTLADGWCRVKDTSRALDLLRQM-AESGIAPTKTTYNVILKGFFRAGQLQH 257
Query: 192 AVYVFKYMK--NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A F MK S++ C+P + SY + G+ ++ R LF +M +G
Sbjct: 258 AWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQ--------LDKARKLFDEMSKEG 309
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
P I + N++I+ +V DA+ +F M + +Y+PN +Y LI GLC G+ A
Sbjct: 310 CPPTIATYNALIQVICKKGNVEDAVTVFDDM-IRKDYIPNVVTYTVLIRGLCHVGKIDRA 368
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVL 367
+L + MK +G P ++YN L+ GE+++ + +L+E + K + TY V+
Sbjct: 369 MKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKAL-HLFERMSKGEECLPNQDTYNIVI 427
Query: 368 DEICRRGRAGEAMKLLKELQNKNLIDGY 395
+ R RA E M + + + + GY
Sbjct: 428 SAMFVRKRA-EDMAIAARMVMEMVERGY 454
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 18/142 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I K+ RA+ + + MKN C P +++YN+L G+ M
Sbjct: 352 YTVLIRGLCHVGKIDRAMKLMERMKNE---GCEPVVQTYNVLIRYSFEEGE--------M 400
Query: 236 ETIRCLFKQMVNDGIE--PDIFSLNSMIKGYILSNHVND---ALRIFHQMGVVYNYLPNS 290
+ LF++M + G E P+ + N +I + D A R+ +M V YLP
Sbjct: 401 DKALHLFERM-SKGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVMEM-VERGYLPRR 458
Query: 291 FSYDYLIHGLCAQGRTKNAREL 312
F + +++GL G + +R+L
Sbjct: 459 FMLNRVLNGLMLTGNQQLSRDL 480
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 131/291 (45%), Gaps = 46/291 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
+A +Y+ + + L QE D+V +M C + + +NT+I+ F + ++S+A
Sbjct: 226 NAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACN 285
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ M + +E P + +YN + A L + + M+ + +QMV+ G+EPD
Sbjct: 286 LINEMVQ-KGVE--PDVVTYNSIVDA-LCKARA-------MDKAELVLRQMVDKGVEPDG 334
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQM-------GVVY----------------------- 284
+ ++I GY S H ++ ++F +M G+V
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394
Query: 285 ----NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
++P+ SY L+HG +GR + L M KG V + +N L+SA A G
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGM 454
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
++E + EM + D +TY T++ CR GR +AM+ ++ + L
Sbjct: 455 MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGL 505
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 131/284 (46%), Gaps = 14/284 (4%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
E+F + + + D +Y I+ + +M+++ + M A +N +I
Sbjct: 390 EIFQYMTTKGHMP-DLVSYSILLHGYATEGRFADMNNLFHSM-ADKGIVANCHCFNILIS 447
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
A+ + A+ VF M+ RP + +Y+ L +AF G+ ME
Sbjct: 448 AHAKRGMMDEAMLVFTEMQGQ---GVRPDVVTYSTLISAFCRMGRLADA----MEK---- 496
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F QM++ G+EP+ +S+I G+ + + A + +M PN + +IH LC
Sbjct: 497 FSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLC 556
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+GR +A ++ + + G P+ ++NSL+ L G++E+ L M+ D +
Sbjct: 557 NEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVV 616
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
TY T++ C+ G+ + + L +E+ +K + TY+ +LD L
Sbjct: 617 TYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGL 660
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 104/243 (42%), Gaps = 10/243 (4%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
AK E DV+ ++ YNT+I + A+ + + M C P
Sbjct: 204 AKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGG-RCSP 262
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+ S+N + F +G+ + + L +MV G+EPD+ + NS++ +
Sbjct: 263 DVVSFNTVIHGFFKQGEVSKACN--------LINEMVQKGVEPDVVTYNSIVDALCKARA 314
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
++ A + QM V P+ +Y +IHG G K + ++ +M KG +P ++N
Sbjct: 315 MDKAELVLRQM-VDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFN 373
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
S +S+L +G ++ + M K D ++Y +L GR + L + +K
Sbjct: 374 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADK 433
Query: 390 NLI 392
++
Sbjct: 434 GIV 436
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 11/212 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+Y+++I+ F L +A + M S+ + RP+I ++ + + + G+ + V
Sbjct: 511 VYHSLIHGFCMHGDLVKAKELVSEMM-SKGIP-RPNIVFFSSIIHSLCNEGRVMDAHDV- 567
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
F +++ G P I + NS+I GY L + A + M V P+ +Y+
Sbjct: 568 -------FNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAM-VSVGIEPDVVTYN 619
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ G C G+ + L EM K P++ +Y+ ++ L G K EMI+
Sbjct: 620 TLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDS 679
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
VD TY+ +L +CR EA+ L +L
Sbjct: 680 GTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 711
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
E + L +M + G P+ S N++IK + +AL + +M P+ S++
Sbjct: 209 EAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFN 268
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+IHG QG A L +EM +KG P +YNS+V AL +++ L +M++K
Sbjct: 269 TVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDK 328
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
D +TY ++ G E+ K+ +++ +K LI G
Sbjct: 329 GVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPG 368
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF-HQMGVVYNYLPNSFSYDYLIHG 299
F +++ G+ N+ +K + ++A+ + H+M + +PN+ SY+ +I
Sbjct: 178 FFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDL-GCVPNAISYNTVIKS 236
Query: 300 LCAQGRTKNARELCDEMKRKGF--VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
LC R++ A ++ M ++G P S+N+++ GEV + + EM++K
Sbjct: 237 LCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVE 296
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D +TY +++D +C+ +A +L+++ +K + DG TYT ++
Sbjct: 297 PDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAII 341
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + ++ K+ + +F+ M + + +P+ +Y+I+ G+ +
Sbjct: 618 YNTLVSGYCKSGKIDDGLILFREMLHKK---VKPTTVTYSIVLDGLFHAGRTS------- 667
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F +M++ G DI + ++KG ++ ++A+ +FH++G + + +
Sbjct: 668 -AAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI-LNT 725
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I+ L R + A +L + G VP+ +Y ++ L G VEE ++ +EK
Sbjct: 726 VINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEA-DTMFSSMEK 783
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 152/323 (47%), Gaps = 35/323 (10%)
Query: 113 LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT 172
++ DP + ++F K ++ ST++ + ++ ++ V+++M
Sbjct: 36 IEHDPPISDKIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVV-V 94
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG----KNT 228
E + I + +A +AV +F M + EC+ +++S+N + + G
Sbjct: 95 EKCFVVIFKAYGKAHLPEKAVGLFDRM--AYEFECKRTVKSFNSVLNVIIQEGLFYRALE 152
Query: 229 YINHVY----------METIRCLFKQM-----VNDGIE-----------PDIFSLNSMIK 262
+ NHV + T + K M V+D ++ PD+++ +++
Sbjct: 153 FYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMD 212
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
G ++ +++A+ + +M + P+ +++ LI+GLC +G +L D M KG
Sbjct: 213 GLCKADRIDEAVSLLDEMQI-DGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCA 271
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P+ +YN+L+ L L G++E+ + L M+ + + +TY T+++ + ++GRA + ++
Sbjct: 272 PNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARV 331
Query: 383 LKELQNKNL-IDGYTYTKLLDVL 404
L ++ + ++ Y Y+ L+ L
Sbjct: 332 LALMEERGYHVNEYVYSALISGL 354
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 20/286 (6%)
Query: 121 LELFN--WASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATP-SFCGTEA-LY 176
LE +N +K + T++++ + + + +DD V P S C + Y
Sbjct: 151 LEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGL---VDDAVQMFRDMPVSKCQPDVYTY 207
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
T++ +A ++ AV + M+ C PS ++N+L +G +
Sbjct: 208 CTLMDGLCKADRIDEAVSLLDEMQIDG---CFPSPVTFNVLINGLCKKGD--------LA 256
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ L M G P+ + N++I G L + A+ + +M V +PN +Y +
Sbjct: 257 RVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRM-VSSKCVPNVVTYGTI 315
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I+GL QGR + + M+ +G+ + Y++L+S L G+ +E ++ EM K+
Sbjct: 316 INGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKEC 375
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++ I Y V+D +CR G+ EA+++L E+ N + YTY+ L+
Sbjct: 376 ELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLM 421
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 106/220 (48%), Gaps = 14/220 (6%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y+ +I + K A+ +FK M EC + Y+ + GK
Sbjct: 344 EYVYSALISGLFKEGKSQEAMQLFKEMTVK---ECELNTIVYSAVIDGLCRDGKPD---- 396
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
E + L +M N+ +P+ ++ +S++KG+ + + + A+ ++ M +N+ N
Sbjct: 397 ---EALEVL-SEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAK-HNFTQNEVC 451
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LIHGLC G+ K A + +M KG P +Y S+++ L+ G VE+ ++ EM+
Sbjct: 452 YSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEML 511
Query: 353 --EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
E D +TY +L+ +C++ A+ LL + ++
Sbjct: 512 CQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRG 551
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 29/278 (10%)
Query: 127 ASKQPRFRH------DASTYHIMTRKLGAAKMYQ-EMDDVVN---QMLATPSFCGTEALY 176
+ P F H D S RK+ ++ ++DD VN M+ + F
Sbjct: 26 GTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPF------- 78
Query: 177 NTIIYF---FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+I+ F + K+++ V + +NL ++ +Y+IL F R +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ------- 131
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ + +M+ G EPDI +LNS++ G+ N ++DA+ + QM V Y P+SF++
Sbjct: 132 -LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM-VEMGYQPDSFTF 189
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LIHGL R A L D M KG P +Y +V+ L G+++ + L +M +
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ + Y T++D +C +A+ L E+ NK +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +++ L AF+ GK + L+ +M+ I+PDIF+ +S+I G+ + +
Sbjct: 324 PNVVTFSALIDAFVKEGK--------LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A +F M + + PN +Y+ LI G C R EL EM ++G V ++ +Y
Sbjct: 376 RLDEAKHMFELM-ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ E + +M+ D +TY +LD +C G+ A+ + + LQ
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 389 KNL-IDGYTYTKLLD 402
+ D YTY +++
Sbjct: 495 SKMEPDIYTYNIMIE 509
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 48/262 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I+ + S AV + M C+P + +Y I+ RG +
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVK---GCQPDLVTYGIVVNGLCKRGD--------I 237
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL 287
+ L K+M IEP + N++I +VNDAL +F +M V YN L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 288 --------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
PN ++ LI +G+ A +L DEM ++
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWE-MIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P +Y+SL++ ++ ++E K+++E MI K + +TY T++ C+ R E M
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 381 KLLKELQNKNLI-DGYTYTKLL 401
+L +E+ + L+ + TYT L+
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLI 438
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 52/292 (17%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+Y EM + + + F Y+++I F +L A ++F+ M + +C
Sbjct: 345 AEKLYDEM---IKRSIDPDIFT-----YSSLINGFCMHDRLDEAKHMFELMISK---DCF 393
Query: 209 PSIRSYNILFTAFL----------------SRG------KNTYINHVYMETIRC-----L 241
P++ +YN L F RG T + H + + C +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL------PNSFSYDY 295
FKQMV+DG+ PDI + + ++ G + V AL VV+ YL P+ ++Y+
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL-------VVFEYLQRSKMEPDIYTYNI 506
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C G+ ++ +L + KG P+ +Y +++S G EE EM E+
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
D TY T++ R G + +L++E+++ + D T + ++L D
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHD 618
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 13/250 (5%)
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKL---SRAVYVFKYMKNSRNLECRPSIRS 213
D +VN+ L S+ + + T++ + + + L SR + +L P I +
Sbjct: 244 DRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVT 303
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
+++L F G V K M G+EP++ + NS++ GY L V +A
Sbjct: 304 FSLLIDIFCKEGNVLEAQGV--------LKTMTEMGVEPNVITYNSLMHGYSLQMEVVEA 355
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
++F M + P+ FSY LI+G C R A++L +EM +G P++ SY +L+
Sbjct: 356 RKLFDVM-ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIH 414
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
A G++ E + +M D TY +L+ C++G G+A +L + +Q L
Sbjct: 415 AFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKP 474
Query: 394 GYT-YTKLLD 402
YT L+D
Sbjct: 475 NLVMYTILID 484
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 21/298 (7%)
Query: 112 TLQEDPLV--CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
+L +D LV L++F++ K +Y + + L + ++E ++N+M + +
Sbjct: 240 SLCKDRLVNEALDIFSYM-KAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEM-TSLNI 297
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
++ +I F + + A V K M + P++ +YN L +
Sbjct: 298 MPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTE---MGVEPNVITYNSLMHGY-------- 346
Query: 230 INHVYMETI--RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
+ ME + R LF M+ G +PD+FS + +I GY + +++A ++F++M +
Sbjct: 347 --SLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEM-IHQGLT 403
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN+ SY LIH C G+ + AREL +M G++P +Y+ L+ G + + +
Sbjct: 404 PNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRL 463
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
M + + Y ++D +C+ G A KL EL L D YT +++ L
Sbjct: 464 FRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGL 521
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 12/219 (5%)
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
R + A+ F +M + + L C I +N L +A + + Y + + L KQM
Sbjct: 69 RNIDDALASFNHMLHRKPLPC---IIQFNKLLSAIVRMRQ-------YYDAVISLSKQME 118
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
G+ P+ +LN +I + L HV+ + ++ + P ++ LI+GLC G
Sbjct: 119 LAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKV-IKLGLQPTIITFTTLINGLCKAGEF 177
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
A EL D+M +G P +Y ++++ L GE + +M E D +TY T+
Sbjct: 178 AQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTL 237
Query: 367 LDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+D +C+ EA+ + ++ K + +YT L+ L
Sbjct: 238 IDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGL 276
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I + +++ A +F M + P+ SY L AF GK +
Sbjct: 374 YSILINGYCMVKRIDEAKQLFNEMIHQG---LTPNTVSYTTLIHAFCQLGK--------L 422
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
R LFK M +G PD+ + + +++G+ ++ A R+F M Y PN Y
Sbjct: 423 REARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY-LKPNLVMYTI 481
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI +C G +AR+L E+ G P + Y ++++ L G ++E ++ +M E
Sbjct: 482 LIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDG 541
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
P + +Y ++ + A++L+ E+++K +
Sbjct: 542 CPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFV 578
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ +++ G++P I + ++I G + AL +F M V P+ ++Y +I+GL
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDM-VARGCQPDVYTYTTIINGL 206
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G T A L +M G P +Y++L+ +L + V E + M K
Sbjct: 207 CKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTV 266
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
++Y +++ +C R EA +L E+ + N++ D T++ L+D+
Sbjct: 267 VSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIF 311
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 9/191 (4%)
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F + L +P+I ++ L G+ + + + LF MV G +PD++
Sbjct: 146 FSVLAKVIKLGLQPTIITFTTLINGLCKAGE-------FAQALE-LFDDMVARGCQPDVY 197
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ ++I G A + +MG V P+ +Y LI LC A ++
Sbjct: 198 TYTTIINGLCKMGETAAAAGLIKKMGEV-GCQPDVVTYSTLIDSLCKDRLVNEALDIFSY 256
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
MK KG P+ SY SL+ L +E L EM D +T+ ++D C+ G
Sbjct: 257 MKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGN 316
Query: 376 AGEAMKLLKEL 386
EA +LK +
Sbjct: 317 VLEAQGVLKTM 327
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 126/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 140 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLAS--- 192
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G
Sbjct: 193 GVQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLIPNGVTFTTLIDGRC 244
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ +M + + LP+ +Y+ LI+GLC +G K A +L DEM KG P
Sbjct: 245 KNGRVDLAMEIYKRM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 303
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 304 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 363
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + +L D TYT +++
Sbjct: 364 MLSVDLKPDTGTYTMIIN 381
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 99/233 (42%), Gaps = 13/233 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY ++ L + +++ ++ML + T+I + ++ A+ +
Sbjct: 197 DVYTYSVLINGLCKESKMDDANELFDEMLV-KGLIPNGVTFTTLIDGRCKNGRVDLAMEI 255
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+K M + L P + +YN L +G ++ L +M G++PD F
Sbjct: 256 YKRMLSQSLL---PDLITYNTLIYGLCKKGD--------LKQAHDLIDEMSMKGLKPDKF 304
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ ++I G ++ A +M + N + +Y LI GLC +GR+ +A ++ E
Sbjct: 305 TYTTLIDGCCKEGDLDTAFEHRKRM-IQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 363
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
M P + +Y +++ G+V + K L EM +TY +++
Sbjct: 364 MLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 416
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++ G+++E
Sbjct: 123 GYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 182
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ M+ D TY +++ +C+ + +A +L E+ K LI +G T+T L+D
Sbjct: 183 FRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLID 241
>gi|255660948|gb|ACU25643.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 484
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRSLVPSFDHELVYNVLHGAKKAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E L+ +I + +A + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF L RG+ YM R F +M+++GIEP + N MI G+ LS V+ A
Sbjct: 118 YDALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNFMIWGFFLSGKVDTA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M +P+ +Y+ +I+G + + EMK + P+ +Y +L+
Sbjct: 170 NRFFEXMK-SREIMPDVITYNTMINGYYRVKKMEEXENYFMEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+++ ++ + EM + ITY T+L +C + EA +LKE+ +K
Sbjct: 229 GYVSVDRIDDALRLVEEMKGFGINPNAITYSTLLPGLCNAEKMSEAQSILKEMVDK 284
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 16/234 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNFMIWGFFLSGKVDTANRFFEXMKSR---EIMPDVITYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + ++DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEXENYFMEMKGRNIEPTVVTYTTLIKGYVSVDRIDDALRLVEEM 246
Query: 281 -GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALN 338
G N PN+ +Y L+ GLC + A+ + EM K P S + L+S
Sbjct: 247 KGFGIN--PNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPKDNSIFLRLISGQCKV 304
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
G ++ L MI P + Y +++ C+ G+ A+K L ++ K++I
Sbjct: 305 GNLDAAADVLKVMIRLSVPTEAGHYGVLIENCCKAGQYDRAVKFLDKVIEKDII 358
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 23/240 (9%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
PSF E +YN + A+K A+ F++++ S E R ++ L G
Sbjct: 7 VPSF-DHELVYNVL----HGAKKAEHALQFFRWVERSNLFEHN---RETHLKIIEIL--G 56
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
+ + +NH RC+ M G+E D MI Y + V +++++F +M GV
Sbjct: 57 RASKLNHA-----RCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGV 111
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
SYD L + +GR A+ ++M +G P+ ++N ++ L+G+V+
Sbjct: 112 ERTIK----SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNFMIWGFFLSGKVD 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+ M ++ D ITY T+++ R + E E++ +N+ TYT L+
Sbjct: 168 TANRFFEXMKSREIMPDVITYNTMINGYYRVKKMEEXENYFMEMKGRNIEPTVVTYTTLI 227
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ ++A L+ A F M + P++ +YNIL A RG +
Sbjct: 119 YNAVLLALSDA-SLTSARRFFDSMLSD---GVAPNVYTYNILIRALCGRG--------HR 166
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + M G P++ + N+++ + + V+ A R+ M + PN +++
Sbjct: 167 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM-LDGGLKPNLVTFNS 225
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+++G+C G+ ++AR++ DEM R+G P SYN+LV G E + EM +K
Sbjct: 226 MVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 285
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D +T+ +++ +C+ G A+ L+++++ + L ++ T+T L+D
Sbjct: 286 IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALID 333
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 105/217 (48%), Gaps = 19/217 (8%)
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+++ R C P++ +YN L AF G+ ++ L M++ G++P++
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGE--------VDGAERLVGMMLDGGLKPNLV 221
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NSM+ G + + DA ++F +M + P+ SY+ L+ G C G + A + E
Sbjct: 222 TFNSMVNGMCKAGKMEDARKVFDEM-MREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAE 280
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +KG +P ++ SL+ + G +E V + +M E+ ++ +T+ ++D C++G
Sbjct: 281 MTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 340
Query: 376 AGEAMKLLKELQN----------KNLIDGYTYTKLLD 402
+A+ ++ ++ LI+GY +D
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMD 377
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + +A A+ VF M + P + ++ L G +
Sbjct: 258 YNTLVGGYCKAGCSHEALSVFAEMTQKGIM---PDVVTFTSLIHVMCKAGN--------L 306
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L +QM G++ + + ++I G+ ++DAL M P+ Y+
Sbjct: 307 EWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQC-RIKPSVVCYNA 365
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C GR AREL EM+ KG P +Y++++SA N + + +M+EK
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY +++ +C R +A L K + L D +TYT L+D
Sbjct: 426 VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 473
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E + +I F + L A+ + M+ R +PS+ YN L + G+
Sbjct: 325 EVTFTALIDGFCKKGFLDDALLAVRGMRQCR---IKPSVVCYNALINGYCMVGR------ 375
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
M+ R L +M G++PD+ + +++I Y + + A + QM + LP++ +
Sbjct: 376 --MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQM-LEKGVLPDAIT 432
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI LC + R +A L M + G P +Y SL+ G VE + +M+
Sbjct: 433 YSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMV 492
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
+ D +TY +++ + + RA EA +LL +L ++ I T
Sbjct: 493 KAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANT 536
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 111/271 (40%), Gaps = 26/271 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + R L K + + M+ E Y ++I + + RA+ +
Sbjct: 429 DAITYSSLIRVLCEEKRLSDAHVLFKNMIKL-GLQPDEFTYTSLIDGHCKEGNVERALSL 487
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI----- 250
M + L P + +Y++L LS+ ME + LFK + I
Sbjct: 488 HDKMVKAGVL---PDVVTYSVLING-LSKSARA------MEAQQLLFKLYHEEPIPANTK 537
Query: 251 ---------EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+ ++ S+ +++KG+ + +N+A +++ M + N+ + Y LIHG C
Sbjct: 538 YDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSM-LDRNWNLDGSVYSVLIHGHC 596
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G A +M ++GF P+S S SL+ L NG V E + + +++ D
Sbjct: 597 RAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAE 656
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ ++D G + +L + L+
Sbjct: 657 ASKALIDLNLNEGNVDAVLDVLHGMAKDGLL 687
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 96/254 (37%), Gaps = 62/254 (24%)
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
+NQ + Y+++I E ++LS A +F
Sbjct: 417 LNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLF----------------------- 453
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
K M+ G++PD F+ S+I G+ +V AL + +
Sbjct: 454 -----------------------KNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDK 490
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV------- 332
M V LP+ +Y LI+GL R A++L ++ + +P++ Y++L+
Sbjct: 491 M-VKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAE 549
Query: 333 --SALAL------NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
S LAL G + E K M+++ +D Y ++ CR G +A+ K
Sbjct: 550 LKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHK 609
Query: 385 ELQNKNLIDGYTYT 398
++ + T T
Sbjct: 610 QMLQRGFAPNSTST 623
>gi|8778500|gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana]
Length = 554
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 32/296 (10%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
+ F W Q FRH A+ YH++ + Y+ M ++++M+ + T +N +I
Sbjct: 214 KFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK-DGYPTTACTFNLLIC 272
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC- 240
EA L+R V V +++K S+ RP SYN + + L + I+ VY + +
Sbjct: 273 TCGEA-GLARDV-VEQFIK-SKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDG 329
Query: 241 --------------------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
L +MV DG PD+++ N ++ N AL
Sbjct: 330 FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 389
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+ + M V P + LI GL G+ + + DE + G P Y +++
Sbjct: 390 NLLNHMREV-GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITG 448
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
GE+E+ + EM EK + + TY +++ C G+ EA LLKE++++
Sbjct: 449 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 504
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 24/248 (9%)
Query: 122 ELFNWASKQ---PRFRHDASTYHIM---TRKLGAA-KMYQEMDDVVNQMLATPSFCGTEA 174
+L +W +Q F D TY+I+ +LG ++Y+ +D++V + +
Sbjct: 316 KLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYT---- 371
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
YN +++ A K A+ + +M R + P + + L GK
Sbjct: 372 -YNILLHHLATGNKPLAALNLLNHM---REVGVEPGVIHFTTLIDGLSRAGK-------- 419
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E + + V G PD+ MI GYI + A +F +M LPN F+Y+
Sbjct: 420 LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEM-TEKGQLPNVFTYN 478
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I G C G+ K A L EM+ +G P+ Y++LV+ L G+V E + + +M+EK
Sbjct: 479 SMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 538
Query: 355 QRPVDFIT 362
V I+
Sbjct: 539 GHYVHLIS 546
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +M+ DG + N +I + D + F + +NY P SY+ ++H L
Sbjct: 251 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIK-SKTFNYRPYKHSYNAILHSL 309
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ K + ++M GF P +YN ++ A G+ + + L EM++ D
Sbjct: 310 LGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 369
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT-YTKLLDVL 404
TY +L + + A+ LL ++ + G +T L+D L
Sbjct: 370 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 414
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 121/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWSLRPSVVS----FNTLMNGYIKLGDLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++ + P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLDNXLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E K MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G+++E + M D TY +++ +C+ + +A +L E+ + L+ +G
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
++ QML+ S YNT+IY + L +A + M + + L +P +Y L
Sbjct: 262 EIYKQMLSQ-SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM-SMKGL--KPDKITYTTL 317
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
G +ET K+M+ + I D + ++I G DA ++
Sbjct: 318 IDGNCKEGD--------LETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKML 369
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+M V P +Y +I+ C +G +L EM+R G++PS
Sbjct: 370 REMLSV-GLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 14/220 (6%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y+T+I + K A+ ++K M C+P+I Y+ L GK
Sbjct: 347 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKG---CQPNIVVYSALIDGLCREGK------ 397
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
++ + + +MVN G P+ F+ +S+IKG+ + + A+R++ +M N +PN
Sbjct: 398 --LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK-NNCVPNEIC 454
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LIHGLC G+ + A + M +G P +Y+S++ L G VE +K EM+
Sbjct: 455 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514
Query: 353 --EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
E D +TY +L +C++ A+ LL + ++
Sbjct: 515 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 554
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 145/317 (45%), Gaps = 42/317 (13%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
++F AS+ ++ ST++ + + + + V ++M E + +
Sbjct: 49 QIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRM-KRERRVFIEKNFILVFR 107
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC- 240
+ +A +A+ +F M + +CR ++RS+N + + G + H +E C
Sbjct: 108 AYGKAHLPEKAIELFGRMVDE--FQCRRTVRSFNSVLNVIIQEG----LFHRALEFYECG 161
Query: 241 --------------------------------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+F++M EPD+F+ +++ G +
Sbjct: 162 VGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKED 221
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A+ + +M + P+S +++ LI+GLC +G +L D M KG VP+ +Y
Sbjct: 222 RIDEAVLLLDEMQI-EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTY 280
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N++++ L L G++++ V L M+ + + +TY T+++ + ++GR+ + + LL L+
Sbjct: 281 NTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEE 340
Query: 389 KN-LIDGYTYTKLLDVL 404
+ + Y Y+ L+ L
Sbjct: 341 RGHHANEYAYSTLISGL 357
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 15/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ + ++ AV + M+ C PS ++N+L +G M
Sbjct: 210 YCTLMDGLCKEDRIDEAVLLLDEMQIEG---CFPSSVTFNVLINGLCKKGD--------M 258
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L M G P+ + N++I G L ++ A+ + +M V +PN +Y
Sbjct: 259 VRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM-VASKCVPNDVTYGT 317
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEK 354
LI+GL QGR+ + L ++ +G + +Y++L+S L E E LW +M+EK
Sbjct: 318 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGL-FKEEKSEEAMGLWKKMVEK 376
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ + Y ++D +CR G+ EA ++L E+ NK + +TY+ L+
Sbjct: 377 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 424
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 12/219 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E YNTII KL +AV + M S+ C P+ +Y L + +G++ H
Sbjct: 277 EVTYNTIINGLCLKGKLDKAVSLLDRMVASK---CVPNDVTYGTLINGLVKQGRSVDGVH 333
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
L + G + ++ +++I G +A+ ++ +M V PN
Sbjct: 334 --------LLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKM-VEKGCQPNIVV 384
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC +G+ A+E+ EM KG P++ +Y+SL+ G ++ ++ EM
Sbjct: 385 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 444
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ + I Y ++ +C G+ EAM + + + L
Sbjct: 445 KNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGL 483
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 124/288 (43%), Gaps = 15/288 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
+E+F + Q + D TY + L E ++++M F + +N +I
Sbjct: 192 IEVFREMAIQ-KCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCF-PSSVTFNVLI 249
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ + R V K + N C P+ +YN + +GK ++
Sbjct: 250 NGLCKKGDMVR---VTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK--------LDKAVS 298
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +MV P+ + ++I G + D + + + + N ++Y LI GL
Sbjct: 299 LLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEE-RGHHANEYAYSTLISGL 357
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ +++ A L +M KG P+ Y++L+ L G+++E + L EM+ K +
Sbjct: 358 FKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNA 417
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLEDD 407
TY +++ + G + +A+++ KE+ N + + Y+ L+ L +D
Sbjct: 418 FTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 465
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 15/234 (6%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y +I+ E ++ + +FK M+ +C P++R+Y ++ A G+
Sbjct: 39 EVSYTNLIHGLCEVGRVDEGINIFKKMRED---DCYPTVRTYTVIVHALFESGRR----- 90
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
ME I LF +M G EP+I + MI + + RI +M V +P+ +
Sbjct: 91 --MEAIN-LFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEM-VEKGLVPSVPT 146
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI G C +G + A+E+ D M P+ ++YN L+ V + L +M+
Sbjct: 147 YNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKML 206
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVL 404
E + +TY +++ C+ G A +LL L N+N + D +TY+ +D L
Sbjct: 207 ESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLN-LMNENGVVPDQWTYSVFIDTL 259
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 124/276 (44%), Gaps = 22/276 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY +M + +E ++++M+ + YN +I + + + A +
Sbjct: 111 TYTVMINAMCKETKLEEGRRILDEMVEK-GLVPSVPTYNALIDGYCKEGMVEAAQEILDL 169
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M ++ C P+ R+YN L F R KN H M L +M+ + P + + N
Sbjct: 170 MHSN---SCNPNERTYNELICGF-CRKKNV---HRAMA----LLSKMLESRLTPSVVTYN 218
Query: 259 SMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S+I G +++ A R+ + M GVV P+ ++Y I LC +GR + A L +
Sbjct: 219 SLIHGQCKIGYLDSAYRLLNLMNENGVV----PDQWTYSVFIDTLCKKGRIEEANVLFNS 274
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
+K KG + Y +L+ G++++ L M+ + + TY ++D +C+ +
Sbjct: 275 LKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERK 334
Query: 376 AGEAMKLLKELQNKNL---IDGYTYTKLLDVLEDDF 408
EA+ L++ + K L + YT + + E DF
Sbjct: 335 VQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDF 370
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 36/285 (12%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G + QE+ D+++ P+ E YN +I F + + RA+ + M SR
Sbjct: 156 KEGMVEAAQEILDLMHSNSCNPN----ERTYNELICGFCRKKNVHRAMALLSKMLESR-- 209
Query: 206 ECRPSIRSYNILFTAFLSRG------------------KNTYINHVYMETI--------- 238
PS+ +YN L G + + V+++T+
Sbjct: 210 -LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEA 268
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
LF + GI+ + ++I GY + ++DA + +M + + LPNS +Y+ LI
Sbjct: 269 NVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRM-LTEDCLPNSSTYNALID 327
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC + + + A L + M +KG + +Y L+ A+ G+ + + L +M+
Sbjct: 328 GLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQP 387
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D Y + C RG EA ++ + + ++ D TYT ++D
Sbjct: 388 DVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVID 432
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Query: 266 LSNHVNDALRIFHQMGVVYNYLP------NSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
L+N VN A +F N +P N SY LIHGLC GR + +M+
Sbjct: 16 LNNDVNSAFSVF-------NMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMRED 68
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
P+ ++Y +V AL +G E + EM E+ + TY +++ +C+ + E
Sbjct: 69 DCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEG 128
Query: 380 MKLLKELQNKNLIDGY-TYTKLLD 402
++L E+ K L+ TY L+D
Sbjct: 129 RRILDEMVEKGLVPSVPTYNALID 152
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 125/302 (41%), Gaps = 51/302 (16%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
LFN + K+ + + Y + A + + ++++ML T + YN +I
Sbjct: 271 LFN-SLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML-TEDCLPNSSTYNALIDG 328
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
+ RK+ A+ + + M + L+C ++ +Y IL A L G Y + +
Sbjct: 329 LCKERKVQEALLLMESMI-QKGLKC--TVPTYTILIVAMLKEGDFDYAHRI--------L 377
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMGVVYNYLPNSFSYDYLIHG 299
QMV+ G +PD++ + I + ++ +A + + + GV +P++ +Y +I
Sbjct: 378 DQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGV----MPDALTYTLVIDA 433
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL----------- 348
G A ++ M G PS +Y+ L+ L L E+ + KN+
Sbjct: 434 YGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHL-LKEELTKKYKNVALCDSIPNVFF 492
Query: 349 ------WEMIEKQRPVDFI-------------TYRTVLDEICRRGRAGEAMKLLKELQNK 389
W+M++ + ++ TY ++ +C+ GR G A KL + +
Sbjct: 493 ADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNER 552
Query: 390 NL 391
+
Sbjct: 553 GV 554
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F M G + S ++I G V++ + IF +M Y P +Y ++H L
Sbjct: 26 VFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCY-PTVRTYTVIVHAL 84
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
GR A L EM+ +G P+ +Y +++A+ ++EE + L EM+EK
Sbjct: 85 FESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSV 144
Query: 361 ITYRTVLDEICRRGRAGEAMKLL 383
TY ++D C+ G A ++L
Sbjct: 145 PTYNALIDGYCKEGMVEAAQEIL 167
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 20/179 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG-KNTYINHVY 234
Y +I + L+ A V K M ++ C PS +Y+ L L Y N
Sbjct: 427 YTLVIDAYGGLGLLNPAFDVLKRMFDTG---CDPSHHTYSCLIKHLLKEELTKKYKNVAL 483
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++I +F D+ + M+K AL +F +M + + PN +Y
Sbjct: 484 CDSIPNVFF--------ADVADVWKMMK-------FETALELFEKM-LEHGCSPNINTYA 527
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI GLC GR A++L D M +G PS YNSL++ G + V+ + M+E
Sbjct: 528 KLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMME 586
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 16/230 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ A ++ A +F M + P + +Y IL + + G+ +
Sbjct: 265 YNILLKVLCGAGRVEDARQLFDEMASP------PDVVTYGILIHGYCALGE--------L 310
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L MV G+EP+ S++ V+DAL + M V + + + Y
Sbjct: 311 ENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDM-VHHKVILDEAVYTT 369
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ G C +G +AR DEM+RKG +Y +L++ L GE++E K L EM+ ++
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
VD +TY ++D C+RG+ EA ++ + + + TYT L D L
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGL 479
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 109/256 (42%), Gaps = 13/256 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + L A +E + V+ +MLA E Y ++ + + K++ A V
Sbjct: 398 DGVTYTTLINGLCRAGELKEAEKVLQEMLAR-RLDVDEVTYTVLVDGYCKRGKMAEAFQV 456
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M P++ +Y L +G N L +M N G+E +
Sbjct: 457 HNTMVQR---GVAPNVVTYTALSDGLCKQGDVQAANE--------LLHEMSNKGLELNAC 505
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NS+I G + +++ A+R M P+ ++Y LI LC G A +L E
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAA-GLKPDVYTYTTLIDALCKSGELDRAHDLLQE 564
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G P+ +YN L++ ++G VE K L M+EK + TY +++ + C
Sbjct: 565 MLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNN 624
Query: 376 AGEAMKLLKELQNKNL 391
++ K + ++N+
Sbjct: 625 MKSTTEIYKGMCSRNV 640
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 12/219 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
EA+Y T++ F L A F M+ R + + + +T + N
Sbjct: 364 EAVYTTVLSGFCNKGDLVSARRWFDEMQ-------RKGLATDGVTYTTLI----NGLCRA 412
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
++ + ++M+ ++ D + ++ GY + +A ++ + M V PN +
Sbjct: 413 GELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTM-VQRGVAPNVVT 471
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y L GLC QG + A EL EM KG ++ +YNSL++ L G +++ ++ + +M
Sbjct: 472 YTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMD 531
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D TY T++D +C+ G A LL+E+ + +
Sbjct: 532 AAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGI 570
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I A +L A V + M +R L+ +Y +L + RGK V+
Sbjct: 402 YTTLINGLCRAGELKEAEKVLQEML-ARRLDVDEV--TYTVLVDGYCKRGKMAEAFQVH- 457
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
MV G+ P++ + ++ G V A + H+M L N+ +Y+
Sbjct: 458 -------NTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL-NACTYNS 509
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC G A +M G P +Y +L+ AL +GE++ L EM++
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+TY +++ C GR KLL+ + KN+ + TY L+
Sbjct: 570 IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLM 616
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I ++ +L RA + + M ++ +P+I +YN+L F G+ +
Sbjct: 542 YTTLIDALCKSGELDRAHDLLQEMLDN---GIKPTIVTYNVLMNGFCMSGR--------V 590
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L + M+ I P+ + NS++K Y + N++ I+ M N PN +Y+
Sbjct: 591 EGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGM-CSRNVEPNENTYNI 649
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
LI G C K A+ +EM KGF ++ SY++L+ L
Sbjct: 650 LIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLL 689
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP--NSFSYDYLIH 298
L +++ GI P + N+++ L ++A+ +F LP N SY+ L+
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRLPL----DEAIELFQG-------LPDKNVCSYNILLK 270
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
LC GR ++AR+L DEM P +Y L+ GE+E VK L +M+ +
Sbjct: 271 VLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEP 327
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
+ Y +V+ +C +GR +A+ +++++ +K ++D YT +L
Sbjct: 328 NATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVL 371
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 150/340 (44%), Gaps = 39/340 (11%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
++ P + + + ++ +++P L +F+ ++ P + H +H + ++L K+
Sbjct: 1 MASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVA 60
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
+ +V + C E + T+I +A+ +A+ +F+ M C+P IRSY
Sbjct: 61 HVSRIVELIRTQKCKC-PEDVALTVIKAYAKNSMPDQALDIFQRMHEI--FGCQPGIRSY 117
Query: 215 NILFTAFLSRGKNTYINH--VYMET---------------IRCLFKQ----------MVN 247
N L A + K +Y ET I C KQ M
Sbjct: 118 NSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWE 177
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQG 304
G PD+FS ++I + +++DAL++F +M GV P+ Y+ LI G +G
Sbjct: 178 QGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVT----PDVACYNILIDGFFKKG 233
Query: 305 RTKNARELCDE-MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
NA E+ + +K P+ SYN +++ L G+ +E+ + M + +R D TY
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 293
Query: 364 RTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLD 402
T++ +C G A ++ KE+ +N D Y +L+
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 333
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 25/263 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML-----ATPSFCGTEALYNTIIYFFAEARKLS 190
D Y M L E+ V++QM P C N +I F A KL
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVC------NAVINGFVRASKLE 481
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A+ F M + C P++ +YN L K + Y L K+M++ G
Sbjct: 482 DALRFFGNMVSKG---CFPTVVTYNTLINGL---SKAERFSEAY-----ALVKEMLHKGW 530
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+P++ + + ++ G ++ AL ++ Q + + P+ ++ +IHGLC+ G+ ++A
Sbjct: 531 KPNMITYSLLMNGLCQGKKLDMALNLWCQ-ALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP-VDFITYRTVLDE 369
+L EMK++ VP+ ++N+L+ + E K +W+ I + P D I+Y L
Sbjct: 590 QLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK-IWDHILQYGPQPDIISYNITLKG 648
Query: 370 ICRRGRAGEAMKLLKELQNKNLI 392
+C R +A+ L + ++ ++
Sbjct: 649 LCSCHRISDAVGFLNDAVDRGVL 671
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 124/286 (43%), Gaps = 39/286 (13%)
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
GA ++Y+EM A +YNT++ + A ++ + ++K M+ C
Sbjct: 308 GATRVYKEM--------AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG---C 356
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
R ++ SYNIL K ++ +++ + D + ++ G +
Sbjct: 357 R-TVVSYNILIRGLFENAK--------VDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 407
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++N AL I + L ++F+Y +I+GLC +GR + D+M + G P+
Sbjct: 408 GYLNKALSILEEAENGRGDL-DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHV 466
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
N++++ ++E+ ++ M+ K +TY T+++ + + R EA L+KE+
Sbjct: 467 CNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEML 526
Query: 388 NKN----------LIDGYTYTKLLDV--------LEDDFGNSIRHH 415
+K L++G K LD+ LE F ++ H
Sbjct: 527 HKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 572
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + L A+ + E +V +ML + Y+ ++ + +KL A+
Sbjct: 501 TYNTLINGLSKAERFSEAYALVKEMLHK-GWKPNMITYSLLMNGLCQGKKLDMAL----- 554
Query: 199 MKNSRNLEC-------RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
NL C +P ++ +NI+ S GK +E L+ +M
Sbjct: 555 -----NLWCQALEKGFKPDVKMHNIIIHGLCSSGK--------VEDALQLYSEMKQRKCV 601
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++ + N++++G+ A +I+ + + Y P+ SY+ + GLC+ R +A
Sbjct: 602 PNLVTHNTLMEGFYKVRDFERASKIWDHI-LQYGPQPDIISYNITLKGLCSCHRISDAVG 660
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
++ +G +P++ ++N LV A+ NG +
Sbjct: 661 FLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T YNT+I ++A + S A + K M + +P++ +Y++L L +GK
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKG---WKPNMITYSLLMNG-LCQGKK---- 549
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
++ L+ Q + G +PD+ N +I G S V DAL+++ +M +PN
Sbjct: 550 ---LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQ-RKCVPNLV 605
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+++ L+ G + A ++ D + + G P SYN + L + + V L +
Sbjct: 606 THNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDA 665
Query: 352 IEKQRPVDFITY----RTVLD 368
+++ IT+ R VLD
Sbjct: 666 VDRGVLPTAITWNILVRAVLD 686
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 18/202 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +Y L K + H E R LF +M G P+ + ++IKG +
Sbjct: 159 PNVVTYTTLI-------KGLCMEHRISEATR-LFLRMQKLGCTPNAVTYGTLIKGLCQTG 210
Query: 269 HVNDALRIFHQM-------GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+VN AL++ +M GV N P +Y +I GLC GR A+EL +EMK +G
Sbjct: 211 NVNIALKLHKEMLNDASQYGV--NCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGM 268
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P SY++L+ G+ +++ EM+++ D +T+ ++D +C+ G+ EA K
Sbjct: 269 IPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKK 328
Query: 382 LLKELQNKNLIDGY-TYTKLLD 402
LL+ + + ++ TY L+D
Sbjct: 329 LLEVMIQRGIVPNLITYNSLID 350
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 113/233 (48%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRN---LECRPSIRSYNILFTAFLSRGKNTYINH 232
Y T+I + ++ A+ + K M N + + C+P + +Y+I+ G+
Sbjct: 199 YGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE----- 253
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ + LF++M G+ PD+ S +++I G+ + + + +F +M V P+ +
Sbjct: 254 ---DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM-VDQGVQPDMVT 309
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ LI LC +G+ A++L + M ++G VP+ +YNSL+ + G++ + M
Sbjct: 310 FSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMP 369
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLDVL 404
K D I+Y T+++ C+ + EAM L E LQ + TY LL L
Sbjct: 370 SKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGL 422
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ II + + A +F+ MK + P + SY+ L F GK H
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMI---PDVISYSTLIHGFCCAGKWDQSKH--- 293
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMGVVYNYLPNSFS 292
LF +MV+ G++PD+ + + +I V +A L + Q G+V PN +
Sbjct: 294 -----LFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIV----PNLIT 344
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI G C G +AREL M KG P SY +L++ +V+E + EM+
Sbjct: 345 YNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEML 404
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ + + TY T+L + ++G+ G+A KL
Sbjct: 405 QVGKSPNVTTYGTLLKGLFQKGKVGDAKKLF 435
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 19/234 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I ++S A +F M + L C P+ +Y L G +
Sbjct: 164 YTTLIKGLCMEHRISEATRLFLRM---QKLGCTPNAVTYGTLIKGLCQTGN--------V 212
Query: 236 ETIRCLFKQMVNDG------IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
L K+M+ND +P + + + +I G ++A +F +M +P+
Sbjct: 213 NIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKA-QGMIPD 271
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
SY LIHG C G+ ++ L DEM +G P +++ L+ L G+V E K L
Sbjct: 272 VISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLE 331
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
MI++ + ITY +++D C G A +L + +K L D +YT L++
Sbjct: 332 VMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLIN 385
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+A + F M S + P I S+N L G INH + L+ +M G+
Sbjct: 74 QAFHFFDLMMRSHPI---PPISSFNRLL------GGLAKINHY--SQLFSLYNEMRLAGL 122
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
PD+F+L+ + N V++AL + + Y+PN +Y LI GLC + R A
Sbjct: 123 SPDLFTLSILANCLCNVNRVSEALAAMAGI-LRRGYIPNVVTYTTLIKGLCMEHRISEAT 181
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ-------RPVDFITY 363
L M++ G P++ +Y +L+ L G V +K EM+ +P ITY
Sbjct: 182 RLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKP-GVITY 240
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
++D +C+ GR EA +L +E++ + +I D +Y+ L+
Sbjct: 241 SIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLI 279
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 23/241 (9%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y T+I + + K+ A+ ++ M P++ +Y L +GK
Sbjct: 377 EISYTTLINGYCKTWKVKEAMNLYNEMLQVGK---SPNVTTYGTLLKGLFQKGK------ 427
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL-----SNHVNDALRIFHQMGVVYNYL 287
+ + LF M G+ S NS I G L ++ + +A+ +F+++ YN+
Sbjct: 428 --VGDAKKLFGVMKTYGV-----SANSQIYGIFLDGLCKNDCLFEAMELFNELKS-YNFK 479
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
N +Y LI GLC G+ + A EL +++ ++G P +YN ++ G+V+
Sbjct: 480 LNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANIL 539
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
+M E D I Y T+L C + E +KLL ++ K++ + + T ++D+L
Sbjct: 540 FEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCK 599
Query: 407 D 407
D
Sbjct: 600 D 600
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLF------KQMVNDGIE----------PDIFSLNSM 260
LFT SRG VY ET L M N +E P +F N +
Sbjct: 41 LFTLLASRGV------VYGETTYKLVVDGLCGAGMANQALELVRELSGVYTPTVFIYNGI 94
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
I G ++ V DA ++ +M V + +PN F+Y L++GLC +TK ARE+ EMKR G
Sbjct: 95 ITGLCRASRVMDAYKVLEKM-VEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNG 153
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+ +Y +L+ L+ GE++E ++ + E + P D IT T++ +C+ R +A+
Sbjct: 154 CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDAL 213
Query: 381 KLLKELQN----------KNLIDGYTYTKLLD 402
K ++E++ NL+ G+ LD
Sbjct: 214 KFMEEMRQMGVRPNEVTYSNLVHGFRQHGELD 245
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 130/270 (48%), Gaps = 22/270 (8%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
+TY ++ L A M + ++V ++ + + T +YN II A SR + +K
Sbjct: 55 TTYKLVVDGLCGAGMANQALELVREL--SGVYTPTVFIYNGIITGLCRA---SRVMDAYK 109
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
++ P++ +Y IL L R T + R +F++M +G +P+ +
Sbjct: 110 VLEKMVEESIVPNVFTYTILLNG-LCRSNKTKLA-------REVFQEMKRNGCKPNPITY 161
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEM 316
++I+ + +++ALR+ + + LP + + ++ GLC R +A + +EM
Sbjct: 162 GTLIQHLSRAGEIDEALRVMIEQRSL--ELPTDVITCTTIVGGLCKASRLDDALKFMEEM 219
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR---PVDFITYRTVLDEICRR 373
++ G P+ +Y++LV +GE++ ++ E EK R ++ Y LD +C+
Sbjct: 220 RQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEE--EKARKGGSLEAAAYPGYLDALCKA 277
Query: 374 GRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
G A K ++EL+ ++ D TY+ L++
Sbjct: 278 GYLDRARKSVEELRQSGVVPDVVTYSMLIN 307
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 115/244 (47%), Gaps = 27/244 (11%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K +EM QM P+ E Y+ +++ F + +L R + F+ K +
Sbjct: 212 ALKFMEEM----RQMGVRPN----EVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLE 263
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ +Y A G Y++ R +++ G+ PD+ + + +I + +
Sbjct: 264 AA--AYPGYLDALCKAG--------YLDRARKSVEELRQSGVVPDVVTYSMLINTFARAG 313
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ +L + M GV P+ +Y LI+ LC + + ++A L + M+ G P+
Sbjct: 314 QFDASLELLEDMRRNGVK----PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNV 369
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMKLLK 384
+YNS++ L +G+++E V ++EM+ K R D +TY +++ + + G A+KL +
Sbjct: 370 VTYNSVMDGLCKSGKMDE-VHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFE 428
Query: 385 ELQN 388
+++
Sbjct: 429 LIKS 432
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSF-CGTEALY-NTIIYFFAEARKLSRAVYVF 196
TY + + L A E+D+ + M+ S T+ + TI+ +A +L A
Sbjct: 160 TYGTLIQHLSRAG---EIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDA---L 213
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
K+M+ R + RP+ +Y+ L F G+ + + E K +E +
Sbjct: 214 KFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEE-----KARKGGSLEAAAYP 268
Query: 257 --LNSMIK-GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
L+++ K GY+ + ++ Q GVV P+ +Y LI+ G+ + EL
Sbjct: 269 GYLDALCKAGYL--DRARKSVEELRQSGVV----PDVVTYSMLINTFARAGQFDASLELL 322
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
++M+R G P +Y++L++ L + ++ + L M P + +TY +V+D +C+
Sbjct: 323 EDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKS 382
Query: 374 GRAGEAMKLLK-ELQNKNLIDGYTYTKLLDVL 404
G+ E ++ + L+++ D TY+ +++ L
Sbjct: 383 GKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGL 414
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + +Y++L F G+ + L + M +G++PD+ + +++I
Sbjct: 297 PDVVTYSMLINTFARAGQ--------FDASLELLEDMRRNGVKPDVVTYSTLINVLCKER 348
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
DA R+ M + PN +Y+ ++ GLC G+ + + M + P +Y
Sbjct: 349 KFQDAFRLLELMEAAGSP-PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTY 407
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRP-VDFITYRTVLDEICRRGRAGEA 379
+ +++ L+ G ++ VK L+E+I+ R D Y V+ +CR G+ EA
Sbjct: 408 SIIMNGLSKAGMLDSAVK-LFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 150/340 (44%), Gaps = 39/340 (11%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
++ P + + + ++ +++P L +F+ ++ P + H +H + ++L K+
Sbjct: 1 MASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVA 60
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
+ +V + C E + T+I +A+ +A+ +F+ M C+P IRSY
Sbjct: 61 HVSRIVELIRTQKCKC-PEDVALTVIKAYAKNSMPDQALDIFQRMHEI--FGCQPGIRSY 117
Query: 215 NILFTAFLSRGKNTYINH--VYMET---------------IRCLFKQ----------MVN 247
N L A + K +Y ET I C KQ M
Sbjct: 118 NSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWE 177
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQG 304
G PD+FS ++I + +++DAL++F +M GV P+ Y+ LI G +G
Sbjct: 178 QGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVT----PDVACYNILIDGFFKKG 233
Query: 305 RTKNARELCDE-MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
NA E+ + +K P+ SYN +++ L G+ +E+ + M + +R D TY
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 293
Query: 364 RTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLD 402
T++ +C G A ++ KE+ +N D Y +L+
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLN 333
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 121/274 (44%), Gaps = 17/274 (6%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI 179
CLEL W + +Y+I+ R L E + ++L C Y +
Sbjct: 344 CLEL--WKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIW-ELLPEKDCCADSMTYGVL 400
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
++ + L++A+ + + +N R +Y+ + G+ ++ +
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRG---DLDTFAYSSMINGLCREGR--------LDEVA 449
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+ QM G +P+ N++I G++ ++ + DALR F M V P +Y+ LI+G
Sbjct: 450 GVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM-VSKGCFPTVVTYNTLING 508
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEKQRPV 358
L R A L EM KG+ P+ +Y+ L++ L G+ + NLW + +EK
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLC-QGKKLDMALNLWCQALEKGFKP 567
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D + ++ +C G+ +A++L E++ + +
Sbjct: 568 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCV 601
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 124/286 (43%), Gaps = 39/286 (13%)
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
GA ++Y+EM A +YNT++ + A ++ + ++K M+ C
Sbjct: 308 GATRVYKEM--------AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG---C 356
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
R ++ SYNIL K ++ +++ + D + ++ G +
Sbjct: 357 R-TVVSYNILIRGLFENAK--------VDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 407
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++N AL I + L ++F+Y +I+GLC +GR + D+M + G P+
Sbjct: 408 GYLNKALSILEEAENGRGDL-DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHV 466
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
N++++ ++E+ ++ M+ K +TY T+++ + + R EA L+KE+
Sbjct: 467 CNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEML 526
Query: 388 NKN----------LIDGYTYTKLLDV--------LEDDFGNSIRHH 415
+K L++G K LD+ LE F ++ H
Sbjct: 527 HKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH 572
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 31/302 (10%)
Query: 113 LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT 172
L D L+ FN S P + H S+Y + + +V +M + T
Sbjct: 77 LWNDGPKALQFFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRSLVYRM-RSARLGPT 135
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI---------------- 216
+ I +A A K RAV VF M C ++S+N
Sbjct: 136 PKTFAIIAERYASAGKPHRAVKVFLSM---HQFGCFQDLQSFNTILDVLCKSKRVEMAYN 192
Query: 217 LFTAFLSRGKNTYINHVYMETIRCL----------FKQMVNDGIEPDIFSLNSMIKGYIL 266
LF F + + +++ M CL K+MV G+ P++ S N+M+KGY
Sbjct: 193 LFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFR 252
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ +N+A F +M + + +Y +IHG G K AR++ D M +KG +PS
Sbjct: 253 AGQINEAWDFFLEMKK-RDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVA 311
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN+ + L V+ + EM+ K + ITY V+ +C RG AM+ + +
Sbjct: 312 TYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRM 371
Query: 387 QN 388
++
Sbjct: 372 KD 373
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 135/280 (48%), Gaps = 23/280 (8%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARK 188
+FR D +Y++M K + +++ +M+ TP+ YNT++ + A +
Sbjct: 200 KFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTS----YNTMLKGYFRAGQ 255
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
++ A F MK +C + +Y + F G+ ++ R +F MV
Sbjct: 256 INEAWDFFLEMKKR---DCEIDVITYTTVIHGFGVAGE--------IKRARKVFDTMVKK 304
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+ P + + N+ I+ ++V++A+ IF +M VV Y+PNS +Y+ +I GLC +G +
Sbjct: 305 GVLPSVATYNAFIQVLCKKDNVDNAIVIFEEM-VVKGYVPNSITYNLVIRGLCHRGEMER 363
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A E MK G P+ ++YN ++ GE+++ + +M + TY ++
Sbjct: 364 AMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILIS 423
Query: 369 EICRRGRAGE---AMKLLKELQNKNLID-GYTYTKLLDVL 404
+ R ++ + A LL E+ ++ + +T+ ++L+ L
Sbjct: 424 AMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGL 463
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
V+ + + + YN +I ++ RA+ ++M ++ C P++++YN++
Sbjct: 331 VIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAM---EFMGRMKDDGCEPNVQTYNLVI 387
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL---R 275
F G+ ++ LF++M + P++ + N +I + +D L
Sbjct: 388 RYFCDEGE--------IDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGN 439
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL------CDEMKRK 319
+ +M V ++P F+++ +++GL G A+E+ C + RK
Sbjct: 440 LLIEM-VDRGFVPRKFTFNRVLNGLLLTGNQGFAKEILRLQSRCGRLTRK 488
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 20/268 (7%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ L + P L+ FNWA + F H+ +Y +M LG A+ + + + +
Sbjct: 92 VLRLIKTPSKALQFFNWAP-ELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSN- 149
Query: 170 CGTEAL----YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
GT L +N++I + +A +V VF MK ++ PS+ ++N L L RG
Sbjct: 150 -GTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMK---SVGVSPSVVTFNSLLLILLKRG 205
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+ V+ E + G+ PD ++ N +I+G+ ++ V++ R F +M +
Sbjct: 206 RTNMAQSVFDEMLSTY-------GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMS-RFK 257
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG--FVPSSKSYNSLVSALALNGEVEE 343
P+ +Y+ L+ GLC G+ A + + M +K P +Y +LV + E++E
Sbjct: 258 CDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDE 317
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ EM+ K + ITY T++ +C
Sbjct: 318 ALVVFEEMVSKGLKPNEITYNTLIKGLC 345
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 120/255 (47%), Gaps = 17/255 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G M Q V ++ML+T +N +I F + + F++ K
Sbjct: 203 KRGRTNMAQ---SVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEG---FRFFKEMSRF 256
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+C P + +YN L GK ++V + + K+ N + PD+ + ++++GY
Sbjct: 257 KCDPDLVTYNTLVDGLCRAGKVNIAHNV----VNGMVKKSTN--LNPDVVTYTTLVRGYC 310
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD-EMKRKGFVPS 324
+ + +++AL +F +M V PN +Y+ LI GLC + +++ + + GF+P
Sbjct: 311 MKHEIDEALVVFEEM-VSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPD 369
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ + N+L++A G + + ++ +M+ D TY ++ +C+RG A +L
Sbjct: 370 TCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFD 429
Query: 385 ELQNKNLI---DGYT 396
EL K ++ DG T
Sbjct: 430 ELSEKEILLRDDGCT 444
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 10/247 (4%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + + L + ++ + L F NT++ A L+ A+ VF+
Sbjct: 336 TYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEK 395
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV--NDGIEPDIFS 256
M L RP +Y++L RG ++ E K+++ +DG P + +
Sbjct: 396 M---MVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSE---KEILLRDDGCTPLVAA 449
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
SM + + A R+F Q+ + + S+ LI G C +G + EL M
Sbjct: 450 YKSMFEFLCRNGKTAKAERVFRQL--MKRGTQDPLSFKILIKGHCREGTFEAGYELLVLM 507
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
R+ FVP ++Y SL+ L GE + L +MI+ + T+ ++L + +G A
Sbjct: 508 LRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCA 567
Query: 377 GEAMKLL 383
E+ + +
Sbjct: 568 HESARFI 574
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P I +N+L F G + R +F ++ G+ P + S N++I G S
Sbjct: 246 PKIYFFNVLMHGFCKAGD--------VGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V + R+ M GV P+ F++ LI+GLC +GR L DEM +G VP+
Sbjct: 298 DVEEGFRLKGVMESEGVC----PDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNG 353
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
++ +L+ G+V+ +KN M+ + D +TY +++ +C+ G EA +L+ E
Sbjct: 354 VTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNE 413
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ L D T+T L+D
Sbjct: 414 MTASGLKPDKITFTTLID 431
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 32/256 (12%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------- 226
+N +++ F +A + A VF + R L RP++ S+N L + G
Sbjct: 250 FFNVLMHGFCKAGDVGNARLVFDEIPK-RGL--RPTVVSFNTLISGCCKSGDVEEGFRLK 306
Query: 227 -------------------NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
N ++ LF +M G+ P+ + ++I G
Sbjct: 307 GVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKG 366
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ AL+ F QM + P+ +Y+ LI+GLC G K AR L +EM G P +
Sbjct: 367 GKVDLALKNF-QMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ +L+ +G++E ++ M+E+ +D + + ++ +CR GR +A ++L ++
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485
Query: 388 NKNL-IDGYTYTKLLD 402
+ D TYT ++D
Sbjct: 486 SAGFKPDDPTYTMVID 501
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 160/380 (42%), Gaps = 48/380 (12%)
Query: 40 LSQTQINPH-LKLSSNAILCSCYSAIALSRSS-------------SRGVGKRSKADSKPA 85
L +T+ +PH L+L LCSC + S S S + K
Sbjct: 13 LWKTKTSPHCLRLR----LCSCTHLLPFSSWSHFPYKDHDLLCEISEAINDSETKHEKGY 68
Query: 86 LDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTR 145
++ + + + L PR + +L + L P L FN + +P FRH +Y M
Sbjct: 69 SENPRLKRILPSLTPR-HVSKLITLNPLCLPPSSLLSFFNHLASRPPFRHTLHSYCTMLH 127
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
L +M + +V+ +++ L+++I+ R + R +
Sbjct: 128 FLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSIL------RTMPRHHH----------- 170
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYM-ETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
S ++F A +S Y++ + + ++C F+ + + I ++++
Sbjct: 171 ----HHHSVGLVFDALIS----AYVDSGFTPDAVQC-FRLVTKNKFPVPIRGCENLLRRV 221
Query: 265 ILSNHVNDALRIFHQMGVV-YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ V + V+ Y P + ++ L+HG C G NAR + DE+ ++G P
Sbjct: 222 VRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRP 281
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ S+N+L+S +G+VEE + M + D T+ +++ +C+ GR E L
Sbjct: 282 TVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLF 341
Query: 384 KELQNKNLI-DGYTYTKLLD 402
E+ + L+ +G T+T L+D
Sbjct: 342 DEMCGRGLVPNGVTFTTLID 361
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F+ M+ G+ PD+ + N++I G + +A R+ ++M P+ ++ LI G C
Sbjct: 376 FQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM-TASGLKPDKITFTTLIDGCC 434
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G ++A E+ M +G ++ +L+S L G V + + L +M+ D
Sbjct: 435 KDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDP 494
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
TY V+D C++G KLLKE+Q+ + G TY L++ L
Sbjct: 495 TYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGL 538
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+I + K+ A+ F+ M RP + +YN L G +
Sbjct: 356 FTTLIDGQCKGGKVDLALKNFQMMLAQ---GVRPDLVTYNALINGLCKVGD--------L 404
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R L +M G++PD + ++I G + AL I +M V + ++
Sbjct: 405 KEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRM-VEEGIELDDVAFTA 463
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC +GR +A + +M GF P +Y ++ G+V+ K L EM
Sbjct: 464 LISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDG 523
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+TY +++ +C++G+ A LL + N + + TY LLD
Sbjct: 524 HVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLD 571
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 5/169 (2%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME+ + ++MV +GIE D + ++I G V+DA R+ M + + P+ +Y
Sbjct: 439 MESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDM-LSAGFKPDDPTYT 497
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I C +G K +L EM+ G VP +YN+L++ L G+++ L M+
Sbjct: 498 MVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNV 557
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
+ ITY +LD + G + + E K L+ Y +YT L++
Sbjct: 558 GVAPNDITYNILLDGHSKHGSSVDVDIFNSE---KGLVTDYASYTALVN 603
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 18/237 (7%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R D TY+ + L +E +VN+M A+ + + T+I + + A+
Sbjct: 385 RPDLVTYNALINGLCKVGDLKEARRLVNEMTAS-GLKPDKITFTTLIDGCCKDGDMESAL 443
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ + M I ++ FTA +S + + M++ G +PD
Sbjct: 444 EIKRRMVEE-------GIELDDVAFTALIS----GLCREGRVHDAGRMLTDMLSAGFKPD 492
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ +I + V ++ +M ++P +Y+ L++GLC QG+ KNA+ L
Sbjct: 493 DPTYTMVIDCFCKKGDVKMGFKLLKEMQS-DGHVPGVVTYNALMNGLCKQGQMKNAKMLL 551
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNG-EVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
D M G P+ +YN L+ + +G V+ + N EK D+ +Y +++E
Sbjct: 552 DAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFN----SEKGLVTDYASYTALVNE 604
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 14/220 (6%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y+T+I + K A+ ++K M C+P+I Y+ L GK
Sbjct: 363 EYAYSTLISGLFKEEKSEEAMGLWKKMVEK---GCQPNIVVYSALIDGLCREGK------ 413
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
++ + + +MVN G P+ F+ +S+IKG+ + + A+R++ +M N +PN
Sbjct: 414 --LDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAK-NNCVPNEIC 470
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LIHGLC G+ + A + M +G P +Y+S++ L G VE +K EM+
Sbjct: 471 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 530
Query: 353 --EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
E D +TY +L +C++ A+ LL + ++
Sbjct: 531 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 570
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 156/346 (45%), Gaps = 50/346 (14%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLE-LFNWASKQPRFRHDASTYHIMTRKLGAAKM 152
++SE PPR V+++ L +F AS+ ++ ST++ + +
Sbjct: 43 SISECPPR-------RVVSVSRSFLQSETYIFKSASQMGSYKSGDSTFYSLIENYANSGD 95
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
+ + V ++M E + + + +A +A+ +F M + +CR ++R
Sbjct: 96 FGTLFQVFDRM-KRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDE--FQCRRTVR 152
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRC-------------------------------- 240
S+N + + G + H +E C
Sbjct: 153 SFNSVLNVIIQEG----LFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAI 208
Query: 241 -LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+F++M EPD+F+ +++ G + +++A+ + +M + P+S +++ LI+G
Sbjct: 209 EVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI-EGCFPSSVTFNVLING 267
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC +G +L D M KG VP+ +YN++++ L L G++++ V L M+ + +
Sbjct: 268 LCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPN 327
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
+TY T+++ + ++GR+ + + LL L+ + + Y Y+ L+ L
Sbjct: 328 DVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGL 373
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 15/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ + ++ AV + M+ C PS ++N+L +G M
Sbjct: 226 YCTLMDGLCKEDRIDEAVLLLDEMQIE---GCFPSSVTFNVLINGLCKKGD--------M 274
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L M G P+ + N++I G L ++ A+ + +M V +PN +Y
Sbjct: 275 VRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM-VASKCVPNDVTYGT 333
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEK 354
LI+GL QGR+ + L ++ +G + +Y++L+S L E E LW +M+EK
Sbjct: 334 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGL-FKEEKSEEAMGLWKKMVEK 392
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ + Y ++D +CR G+ EA ++L E+ NK + +TY+ L+
Sbjct: 393 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 440
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 12/219 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E YNTII KL +AV + M S+ C P+ +Y L + +G++ H
Sbjct: 293 EVTYNTIINGLCLKGKLDKAVSLLDRMVASK---CVPNDVTYGTLINGLVKQGRSVDGVH 349
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
L + G + ++ +++I G +A+ ++ +M V PN
Sbjct: 350 --------LLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKM-VEKGCQPNIVV 400
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC +G+ A+E+ EM KG P++ +Y+SL+ G ++ ++ EM
Sbjct: 401 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 460
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ + I Y ++ +C G+ EAM + + + L
Sbjct: 461 KNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGL 499
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 124/288 (43%), Gaps = 15/288 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
+E+F + Q + D TY + L E ++++M F + +N +I
Sbjct: 208 IEVFREMAIQ-KCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCF-PSSVTFNVLI 265
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ + R V K + N C P+ +YN + +GK ++
Sbjct: 266 NGLCKKGDMVR---VTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK--------LDKAVS 314
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +MV P+ + ++I G + D + + + + N ++Y LI GL
Sbjct: 315 LLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEE-RGHHANEYAYSTLISGL 373
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ +++ A L +M KG P+ Y++L+ L G+++E + L EM+ K +
Sbjct: 374 FKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNA 433
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLEDD 407
TY +++ + G + +A+++ KE+ N + + Y+ L+ L +D
Sbjct: 434 FTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 481
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 150/334 (44%), Gaps = 30/334 (8%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQ-EDPLVCLELFNWASKQPRFRHDASTYHIMTRK 146
++ + VS + P ++ V++LQ D +C+ F W K + D + + + +
Sbjct: 57 NSSLKSLVSHMSPNVASQ----VISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKL 112
Query: 147 LGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
+ ++ +++ DV+ ++ S C E L +I F E R++S + Y S L
Sbjct: 113 IVSSGLFRVAHDVIVALIRECSRCEKEML--KLISCFDELREVSG--FRLNYPCYSSLLM 168
Query: 207 CRPSIRSYNILFTAFLSRGK-----------------NTYINHVYMETIRCLFKQMVNDG 249
S+ ++ F A+++ + N + Y E +++ G
Sbjct: 169 ---SLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVG 225
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
D + S++ G+ ++ DAL++F M PNS SY LIHGLC GR + A
Sbjct: 226 FLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEA 285
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
L D+M KG PS+++Y L+ AL G +++ EMI + + TY ++D
Sbjct: 286 FGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDG 345
Query: 370 ICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
+CR G+ EA + +++ + TY L++
Sbjct: 346 LCRDGKIEEANGVCRKMVKDGIFPSVITYNALIN 379
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I+ E +L A F C+PS R+Y +L A RG I+ +
Sbjct: 269 YSILIHGLCEVGRLEEA---FGLKDQMGEKGCQPSTRTYTVLIKALCDRG---LIDKAFN 322
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +M+ G +P++ + +I G + +A + +M V P+ +Y+
Sbjct: 323 -----LFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM-VKDGIFPSVITYNA 376
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C GR A EL M+++ P+ +++N L+ L G+ + V L M++
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ++Y ++D +CR G A KLL + + +L D T+T +++
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIIN 484
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 134/319 (42%), Gaps = 47/319 (14%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L++F+ S++ ++ +Y I+ L +E + +QM T Y +I
Sbjct: 250 LKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT-YTVLI 308
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ + +A +F M +R C+P++ +Y +L GK N V
Sbjct: 309 KALCDRGLIDKAFNLFDEMI-ARG--CKPNVHTYTVLIDGLCRDGKIEEANGVC------ 359
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---------------LRIFHQM----- 280
++MV DGI P + + N++I GY V A +R F+++
Sbjct: 360 --RKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 281 --GVVYNYL------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
G Y + P+ SY+ LI GLC +G A +L M P
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCL 477
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++ ++++A G+ + L M+ K +D +T T++D +C G+ +A+ +L+ L
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETL 537
Query: 387 -QNKNLIDGYTYTKLLDVL 404
+ + L ++ +LD+L
Sbjct: 538 VKMRMLTTPHSLNVILDML 556
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+ P + + +++ G I S ++ + R+ M + LPN + Y +I+GLC GR +
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKL-SGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A +L M+ G P+ +Y +V NG+++ ++ + M+E+ ++ Y ++L
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 90/249 (36%), Gaps = 45/249 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I ++ A + M NS +LE P ++ + AF +GK
Sbjct: 444 YNVLIDGLCREGHMNVAYKLLTSM-NSFDLE--PDCLTFTAIINAFCKQGKA-------- 492
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF------------HQMGVV 283
+ M+ GI D + ++I G DAL I H + V+
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVI 552
Query: 284 YNYL----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+ L P+ +Y L+ GL G + + + MK G
Sbjct: 553 LDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGC 612
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P+ Y +++ L G VEE K L M + + +TY ++ G+ A++
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 382 LLKELQNKN 390
++ + +
Sbjct: 673 TVRAMVERG 681
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 33/261 (12%)
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+ML TP N I+ ++ KL + + + L PS+ +Y L
Sbjct: 541 RMLTTPHS------LNVILDMLSKGCKLKEELAMLGKINK---LGLVPSVVTYTTLVDGL 591
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM- 280
+ G + + R + + M G P+++ +I G V +A ++ M
Sbjct: 592 IRSGDIS-------GSFR-MLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 281 --GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
GV PN +Y ++ G G+ A E M +G+ + + Y+SL+ L+
Sbjct: 644 DSGVS----PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLS 699
Query: 339 GE-VEET----VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
+ + ET +K L ++E+ ++ +C+ GR E+ L++ + L
Sbjct: 700 QKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTI----LKS 755
Query: 394 GYTYTKLLDVLEDDFGNSIRH 414
G K +D++ + + + +H
Sbjct: 756 GVFLEKAIDIIMESYCSKKKH 776
>gi|255660884|gb|ACU25611.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 484
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 13/298 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKEXIVQESVKMFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YNALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C EA +LKE+ +K L
Sbjct: 229 GYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEXMSEARVILKEMMDKYL 286
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMING 194
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
+ K ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 195 YYRVKK--------MEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEXMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDII 358
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEXIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|414872445|tpg|DAA51002.1| TPA: hypothetical protein ZEAMMB73_961198 [Zea mays]
Length = 765
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 119/232 (51%), Gaps = 16/232 (6%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LYN I+ F + R+L ++ +F MK + P I +YN + A + G+
Sbjct: 226 LYNICIHAFGKWRQLDMSLGLFAAMKAATP-PVEPDICTYNSVIRALVVGGR-------- 276
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-GVVYNYLPNSFSY 293
+ ++ +M + GIEPD+F+ +++ G S ++DALR+FH+M G++ + + Y
Sbjct: 277 VPDALVIYDEMKSSGIEPDVFTYRAVMNGCCKSFRMDDALRVFHEMRGIIG--VSDVVVY 334
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L+ GL + A + M G S+ ++N+++ L NG E + +E+
Sbjct: 335 NSLLDGLFKVKKLDEACSFFETMVADGIQCSASTHNTVIDGLFNNGRAEAACRLFYELRR 394
Query: 354 KQRPVDFITYRTVLDEICRRG---RAGEAMKLLKELQNKNL-IDGYTYTKLL 401
K + +D I Y ++ E C+ G + EA++L+KE++ + +D T T LL
Sbjct: 395 KGQLLDGIAYSIMVREFCKEGIGDQVAEAVELVKEMEQQGFSVDLVTITSLL 446
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM--VNDGIE 251
YVF+ M + R L ++R YNI AF GK ++ LF M +E
Sbjct: 210 YVFEEM-SRRGLPS--NVRLYNICIHAF---GKWRQLDMSL-----GLFAAMKAATPPVE 258
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PDI + NS+I+ ++ V DAL I+ +M P+ F+Y +++G C R +A
Sbjct: 259 PDICTYNSVIRALVVGGRVPDALVIYDEMKS-SGIEPDVFTYRAVMNGCCKSFRMDDALR 317
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ EM+ V YNSL+ L +++E M+ T+ TV+D +
Sbjct: 318 VFHEMRGIIGVSDVVVYNSLLDGLFKVKKLDEACSFFETMVADGIQCSASTHNTVIDGLF 377
Query: 372 RRGRAGEAMKLLKELQNKN-LIDGYTYTKLL 401
GRA A +L EL+ K L+DG Y+ ++
Sbjct: 378 NNGRAEAACRLFYELRRKGQLLDGIAYSIMV 408
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 215 NILFTAFLSRGKNTYINHVYMETIRC-LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
N + FL++GK ++ C LF+ N G + ++ NS++ ++ ++
Sbjct: 577 NTYLSIFLAKGK---------LSVACKLFEIFTNLGNKGTSYTYNSLMTSFVKKGYLKQV 627
Query: 274 LRIFHQMGVVYNYLPNSF-SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
+ H+ G PN +Y+ +I GL G+ AR + D + +KG YN+L+
Sbjct: 628 WAVLHERG--GQLCPNDVATYNLIIQGLGLMGKADVARTIIDRLSKKGVYMDIVMYNTLI 685
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
S L G+VEE ++I D +T+ T++ + GR EA K L+ + + +
Sbjct: 686 SQLGKVGKVEEAGCLFEQIIRSGMKPDVVTFNTLISINAKAGRLKEAGKYLRRMIREGIA 745
Query: 393 DGYTYTKLLDVLEDDF 408
+ +L L+ +
Sbjct: 746 PNHATETILIFLDKEI 761
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 128/270 (47%), Gaps = 14/270 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FR + TY + L + ++ NQM YN+++ E + S A
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQM-GDNGIRPNVVTYNSLVSGLCEIGRWSDA 241
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
++ + M R ++ P++ ++ L AF+ GK ME + L+K M+ + P
Sbjct: 242 AWLLRDMMK-RGIQ--PNVITFTALIDAFVKVGK-------IMEA-KELYKVMIQMSVYP 290
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+F+ ++I G +++A ++F+ M Y PN +Y LIHG C R ++ ++
Sbjct: 291 DVFTYTALINGLCTYGRLDEARQMFYLMES-NGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM +KG V ++ +Y L+ L G + + +M ++ P D TY +LD +C
Sbjct: 350 FYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCY 409
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
G +A+ + K ++ + + I+ TYT ++
Sbjct: 410 NGYVEKALMIFKYMRKREMDINIVTYTIII 439
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 19/230 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ +I F + K+ A ++K M + P + +Y L + G+ +
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQ---MSVYPDVFTYTALINGLCTYGR--------L 308
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ R +F M ++G P+ + ++I G+ S V D +IF++M G+V N+ +
Sbjct: 309 DEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV----ANTIT 364
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI G C GR A+E+ ++M + P ++YN L+ L NG VE+ + M
Sbjct: 365 YTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMR 424
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+++ ++ +TY ++ +C+ G+ +A L L +K + + TYT ++
Sbjct: 425 KREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMI 474
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+ + A+ +F M +SR L PSI + L + + + + LF+QM
Sbjct: 62 QFNEALDLFTRMVHSRPL---PSIVDFTRLLSVIAKMKR--------FDVVISLFEQMQI 110
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI P +++ N ++ S+ A +M + + P+ ++ L+HG C R +
Sbjct: 111 LGISPVLYTCNIVMNCVCRSSQPCRASCFLGKM-MKLGFEPDLVTFTSLLHGFCHWNRIE 169
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A L D++ GF P+ +Y +L+ L N + V+ +M + + +TY +++
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+C GR +A LL+++ + + + T+T L+D
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAF 267
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I + + A VF M + R P IR+YN+L G Y+
Sbjct: 365 YTVLIQGYCLVGRPDVAQEVFNQMGSRR---APPDIRTYNVLLDGLCYNG--------YV 413
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +FK M ++ +I + +I+G V DA +F + PN +Y
Sbjct: 414 EKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSL-FSKGMKPNVITYTT 472
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+I G C +G A L +MK GF+P+
Sbjct: 473 MISGFCRRGFIHEADALFKKMKEDGFLPN 501
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 18/281 (6%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA 165
E+ N + + + L+ L F + F+H TY M ++LG Y+ D + +L
Sbjct: 42 EVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLG----YERDIDGIQYLLQ 97
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
G + + R+ A K C+PS++ YN + A LS
Sbjct: 98 LMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSEN 157
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
K IN +Y M DGIE ++++ N ++K ++ V+ A ++ +M
Sbjct: 158 KFQMINGIY--------NNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMS-YKG 208
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+P++ SY ++ +C G+ + AREL M+ K FVP YN+L++ ++EE
Sbjct: 209 CIPDAVSYTTVVSSMCRLGKVEEAREL--SMRIKSFVP---VYNALINGFCREHKMEEVF 263
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ EM + D ITY TV++ + G A+ +L ++
Sbjct: 264 ELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKM 304
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN +I F K+ +F M P + +Y+ + G
Sbjct: 245 VYNALINGFCREHKMEEVFELFNEMAVEG---IDPDVITYSTVINTLSEMGN-------- 293
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E + +M G P++ + S++KGY + + +AL ++++M + PN+ +Y+
Sbjct: 294 VEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRM-IQEGSEPNTVAYN 352
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LIHGLC+ G+ A + +M+R G P+ +Y++L+ A G++ + +MI
Sbjct: 353 TLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITN 412
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+ + Y ++D +CR A+ L++ + N N
Sbjct: 413 GCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGN 448
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 14/231 (6%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y+T+I FA+A L A ++ M + C P++ Y + +N+ NH
Sbjct: 383 ETTYSTLIDGFAKAGDLVGASEIWNKMITNG---CLPNVVVYTCMVDVLC---RNSMFNH 436
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
L + M N P+ + N+ IKG S A+++ +QM Y PN +
Sbjct: 437 ALH-----LIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQ-YGCAPNVTT 490
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ ++ GL RT+ A ++ E++ + +YN+++S G + ++ +++
Sbjct: 491 YNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLL 550
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK--NLIDGYTYTKLL 401
D ITY TV+ C++G A++L+ L K D +TYT LL
Sbjct: 551 VGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLL 601
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 109/232 (46%), Gaps = 13/232 (5%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E D+ N+M+ S T A YNT+I+ K+ AV V + M+ RN P+ +Y
Sbjct: 331 EALDLWNRMIQEGSEPNTVA-YNTLIHGLCSYGKMVEAVSVSQKME--RN-GVFPNETTY 386
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ L F G + ++ +M+ +G P++ M+ ++ N AL
Sbjct: 387 STLIDGFAKAGDLVGASEIW--------NKMITNGCLPNVVVYTCMVDVLCRNSMFNHAL 438
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+ M N PN+ +++ I GLC G+T+ A ++ ++M++ G P+ +YN ++
Sbjct: 439 HLIENMAN-GNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDG 497
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L E ++ + E+ E + + +TY T+L C G A+++ +L
Sbjct: 498 LFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKL 549
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ A++ A+ + ++ +E + ++ +YN + + F G ++
Sbjct: 491 YNEVLDGLFNAKRTREALQIVGEIEE---MEIKSNLVTYNTILSGFCHAG-------MFK 540
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++ K +V G +PD + N++I Y V A+++ ++ P+ F+Y
Sbjct: 541 GALQIAGKLLVG-GTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTS 599
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
L+ G+C A D+M +G P+ ++N+LV L
Sbjct: 600 LLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 13/229 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +I + R+ A +F+ M N R LE P+ +Y IL + RG M+
Sbjct: 339 NALIDKLCKDRRFREAERLFRGMAN-RGLE--PNEVTYAILIHSLCKRG--------MMD 387
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
C+F +M GI ++ NS+I GY ++ + A + ++M V P++ SY L
Sbjct: 388 DALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEM-VEKGLAPSAASYSPL 446
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GLC +G +A EL EM R G + ++ +L+S +G ++E + +MI+
Sbjct: 447 IAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSV 506
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ +T+ +++ CR G +A +L ++ ++ L D YTY L+ VL
Sbjct: 507 VPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVL 555
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 16/270 (5%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ A Y+++ L E +V N M+ E Y T++Y F +L A+
Sbjct: 227 KGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVER-GIVADEVTYRTLVYGFCRTEELEMAL 285
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ + +L PS+ S + + RG +I+ + + C ++ G+ P+
Sbjct: 286 ---EMTDDMLSLHFVPSVASCSFMVDGLRKRG---HIDKAF--RLACHLGEL---GMVPN 334
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+F+ N++I +A R+F M PN +Y LIH LC +G +A +
Sbjct: 335 LFACNALIDKLCKDRRFREAERLFRGMAN-RGLEPNEVTYAILIHSLCKRGMMDDALCMF 393
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
D M+ KG + YNSL++ + + L EM+EK +Y ++ +CR+
Sbjct: 394 DRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRK 453
Query: 374 GRAGEAMKLLKELQNKNLIDG--YTYTKLL 401
G AM+L +E+ +N + G YT+T L+
Sbjct: 454 GDLASAMELHREMA-RNGVSGNVYTFTTLI 482
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 119/247 (48%), Gaps = 18/247 (7%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
S ++ LGA K + +DD+ N + SF T T++Y F + +L+ +++
Sbjct: 550 SLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLT-----TLMYGFCKEGRLTETYHIWD 604
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
M+ +R + + + S+ ++ A L E I LF++M G++PD
Sbjct: 605 EMR-ARGV--KLDLISFTVIVYAALKLHDG--------EKISVLFREMKEKGVKPDNVFH 653
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
MI + ++ AL + +M + PN +Y LI+ LC G +A+ LC+EM
Sbjct: 654 TCMIDVHSKEENIVQALNCWDKM-IADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEML 712
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
F+P+S +YN + LA GE+E+ K L I + + +T+ T++ C+ G+
Sbjct: 713 VGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQIQ 771
Query: 378 EAMKLLK 384
A+ L++
Sbjct: 772 GAIDLMQ 778
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 117/253 (46%), Gaps = 16/253 (6%)
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
+ + ++N+M+ + A Y+ +I L+ A+ + + M +RN ++
Sbjct: 421 FHQARGLLNEMV-EKGLAPSAASYSPLIAGLCRKGDLASAMELHREM--ARN-GVSGNVY 476
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
++ L + F G M+ LF +M++ + P+ + N MI+GY +V
Sbjct: 477 TFTTLISGFCKDGN--------MDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRK 528
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A +++ QM V P++++Y LI LC A+E D+++ V +S S +L+
Sbjct: 529 AFQLYDQM-VDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLM 587
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL-KELQNKNL 391
G + ET EM + +D I++ TV+ + GE + +L +E++ K +
Sbjct: 588 YGFCKEGRLTETYHIWDEMRARGVKLDLISF-TVIVYAALKLHDGEKISVLFREMKEKGV 646
Query: 392 -IDGYTYTKLLDV 403
D +T ++DV
Sbjct: 647 KPDNVFHTCMIDV 659
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P++ +Y +L G Y+ + + L ++M+ P+ F+ N + ++
Sbjct: 681 CSPNVVTYTVLINHLCKSG--------YLSSAQILCEEMLVGRFLPNSFTYNCFLD-FLA 731
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ + ++ H ++ L N+ +++ LI G C G+ + A +L GF P
Sbjct: 732 NEGELEKAKVLHAT-ILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCI 790
Query: 327 SYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFITYRTVL 367
SY+++++ L G++ + + LW EM+ K D + Y ++
Sbjct: 791 SYSTIINELCKVGDINKAFQ-LWNEMLYKGLKPDIVAYNILI 831
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%)
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ + Y I C AR L M+ KG S+ YN L+ L N V E V+
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVK 253
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
M+E+ D +TYRT++ CR A+++ ++
Sbjct: 254 NSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDM 291
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 128/264 (48%), Gaps = 18/264 (6%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
+ D T+ + L D++ +M+++ C NT++ ++ KL
Sbjct: 217 KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS-GVCPNVVTCNTLLDGLCDSGKLKD 275
Query: 192 AVYVFKYMKNSR-NLEC-------RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK 243
A+ +FK M+ S +++ P +++YNIL + ++ GK ++E L++
Sbjct: 276 ALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGK-------FLEAEE-LYE 327
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
+M + GI PD + +SMI G + +++A ++F MG ++ PN +++ LI G C
Sbjct: 328 EMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS-KSFSPNIVTFNTLITGYCKA 386
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G + EL EM R+G V ++ +Y +L+ G + ++ EMI D IT
Sbjct: 387 GMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITI 446
Query: 364 RTVLDEICRRGRAGEAMKLLKELQ 387
R +L + + +A+ +L+ELQ
Sbjct: 447 RNMLTGLWSKEELKKALAMLEELQ 470
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 114/237 (48%), Gaps = 22/237 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I F + K S A + + M + P + +++ L A + G +
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRK---ISPDVVTFSGLINALVKEGD--------L 238
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV---------VYNY 286
+ + L ++M++ G+ P++ + N+++ G S + DAL +F M +N
Sbjct: 239 NSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG 298
Query: 287 L-PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+ P+ +Y+ LI GL +G+ A EL +EM +G VP + +Y+S+++ L ++E
Sbjct: 299 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEAT 358
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ M K + +T+ T++ C+ G + ++L E+ + ++ + TY L+
Sbjct: 359 QMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLI 415
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 16/244 (6%)
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
L F T +NT+++ ++S A+ +F M C+P++ ++ L
Sbjct: 41 LTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM-------CKPNVVTFTTLMNGLCR 93
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
G+ +E + L +MV DG++P+ + +++ G AL + +M +
Sbjct: 94 EGR-------VVEAV-ALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEL 145
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+ P+ Y +I GL GR +A+ L EM+ KG P +Y+ +++ +G+ E
Sbjct: 146 SHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSE 205
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ L EM+ ++ D +T+ +++ + + G A LL+E+ + + + T LLD
Sbjct: 206 AQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLD 265
Query: 403 VLED 406
L D
Sbjct: 266 GLCD 269
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 119/264 (45%), Gaps = 28/264 (10%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY M ++ + E ++ +ML +P L N ++ + L+ A
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALV----KEGDLNSA 241
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN----- 247
+ + M +S P++ + N L GK +E + + K M++
Sbjct: 242 QDLLQEMISSG---VCPNVVTCNTLLDGLCDSGKLKD----ALEMFKAMQKSMMDIDATH 294
Query: 248 --DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCA 302
+G+EPD+ + N +I G I +A ++ +M G+V P++ +Y +I+GLC
Sbjct: 295 AFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV----PDTVTYSSMINGLCK 350
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
Q R A ++ D M K F P+ ++N+L++ G V++ ++ EM + + IT
Sbjct: 351 QSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410
Query: 363 YRTVLDEICRRGRAGEAMKLLKEL 386
Y T++ + G ++ + +E+
Sbjct: 411 YITLIRGFRKVGNINGSLDIFQEM 434
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I +A + AV VFK ++ CRP++ +YN++ + G +
Sbjct: 223 YTSLITAYASNGRYREAVMVFKKLEEEG---CRPTLITYNVILNVYGKMG-------MPW 272
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
I L M + G+ PD+++ N++I + +A +F +M + P+ +Y+
Sbjct: 273 SKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAA-GFSPDKVTYNA 331
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ R + A E+ EM+ GF PS +YNSL+SA A +G ++E ++ +M++K
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKG 391
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
D TY T+L + G+ AMK+ +E++
Sbjct: 392 IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 46/287 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + +Y+E +V +M A F + YN ++ + ++R+ A+ V
Sbjct: 290 DLYTYNTLISSCRRGSLYEEAAEVFEEMKAA-GFSPDKVTYNALLDVYGKSRRPREAMEV 348
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
K M+ S PSI +YN L +A+ G ++ L QMV GI+PD+F
Sbjct: 349 LKEMEASG---FAPSIVTYNSLISAYARDG--------LLDEAMELKSQMVKKGIKPDVF 397
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVV--------YNYL-------------------- 287
+ +++ G+ + + A+++F +M V +N L
Sbjct: 398 TYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457
Query: 288 ------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
P+ +++ L+ G + EMKR GFVP ++N+L+SA + G
Sbjct: 458 KICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFF 517
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
++ + M++ D TY VL + R G ++ K+L E+++
Sbjct: 518 DQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKD 564
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 41/249 (16%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K RA + + + RN I +Y L TA+ S G+ Y E + +FK++
Sbjct: 197 KEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGR-------YREAV-MVFKKLEE 248
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-------------PNSFSYD 294
+G P + + N + L ++ +MG+ ++ + P+ ++Y+
Sbjct: 249 EGCRPTLITYNVI-------------LNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYN 295
Query: 295 YLIHGLCAQGRT-KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI C +G + A E+ +EMK GF P +YN+L+ + E ++ L EM
Sbjct: 296 TLISS-CRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEA 354
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLE----DDF 408
+TY +++ R G EAM+L ++ K + D +TYT LL E DD+
Sbjct: 355 SGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDY 414
Query: 409 GNSIRHHLR 417
+ +R
Sbjct: 415 AMKVFEEMR 423
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ A ++ V MK+ R C+P+ +Y L A Y N +
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGR---CKPNELTYCSLLHA--------YANGKEV 587
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +++ + IEP L +++ Y S+ + + R F ++ + P+ + +
Sbjct: 588 ERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELRE-QGFSPDITTLNA 646
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ + E+ + +K GF PS +YNSL+ + E++ L E+I K
Sbjct: 647 MVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKG 706
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D I++ TV+ CR GR EA ++ E+++ L D TY +
Sbjct: 707 MKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFI 753
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I A VF+ MK + P +YN L + GK+ M
Sbjct: 294 YNTLISSCRRGSLYEEAAEVFEEMKAAG---FSPDKVTYNALLDVY---GKSRRPREA-M 346
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + K+M G P I + NS+I Y +++A+ + QM V P+ F+Y
Sbjct: 347 EVL----KEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM-VKKGIKPDVFTYTT 401
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G G+ A ++ +EM+ G P+ ++N+L+ G E +K E+ +
Sbjct: 402 LLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICE 461
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D +T+ T+L + G E + KE++ +
Sbjct: 462 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 498
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
+ G P + + NS++ Y + H + I ++ + P+ S++ +I C GR
Sbjct: 669 DSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREI-IAKGMKPDIISFNTVIFAYCRNGRM 727
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
K A + EMK G P +YN+ +++ A + E + + MI+ + TY ++
Sbjct: 728 KEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSL 787
Query: 367 LDEICRRGRAGEAMKLLKELQN 388
+D C+ R EA + L+N
Sbjct: 788 IDWFCKLNRRDEASSFISNLRN 809
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 32/257 (12%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN-- 231
YNT+I + + RA +FK +K L P++++Y + F +GK ++
Sbjct: 208 VFYNTLIDGYCKKGDTERANVLFKELKMKGFL---PTVKTYGAIINGFCKKGKFEVVDKL 264
Query: 232 -------------HVYMETIRCLFKQ------------MVNDGIEPDIFSLNSMIKGYIL 266
H+Y I FK M+ G +PD+ + N +I G
Sbjct: 265 LVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCS 324
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V+ A ++ Q + LPN SY LIH C QG A +L +M +G P
Sbjct: 325 CGEVHKAEQLLEQ-AIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLV 383
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y +L+ L + GEV+ + +M+EK D Y ++ +C++GR A LL E+
Sbjct: 384 TYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEM 443
Query: 387 QNKNLI-DGYTYTKLLD 402
++N+ D + L+D
Sbjct: 444 LDQNVAPDAFITATLVD 460
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 14/274 (5%)
Query: 108 CNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKM--YQEMDDVVNQMLA 165
C++ DP + LE F+WASKQ + + + + A+ + E++ ++ +++
Sbjct: 35 CHMFDQIHDPEMGLEFFHWASKQSNCGNYLNEFSCSSLLRLLARRRLFSEVESLL-KIMK 93
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
+ T ++ +I FA+ + RA+ ++ + C P + S N L + G
Sbjct: 94 SKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHH--CVPDVFSCNSLLNVLVKHG 151
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
K VY E MV+ E D +++ M+KG V D ++ +
Sbjct: 152 KVEIACKVYDE--------MVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWG-RG 202
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+PN Y+ LI G C +G T+ A L E+K KGF+P+ K+Y ++++ G+ E
Sbjct: 203 CMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVD 262
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
K L EM E+ V Y ++D + G EA
Sbjct: 263 KLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEA 296
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 158 DVVNQMLATPSFCGTEA---LYNTII-YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
+VV+++L S G + +YN II F ++ A V +K+ C P + +
Sbjct: 259 EVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSG----CDPDMAT 314
Query: 214 YNILFTAFLSRGKNTYINHVYMETIR-----------------C----------LFKQMV 246
YNIL T S G+ + + I+ C L +M
Sbjct: 315 YNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMS 374
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
G +PD+ + ++I G I++ V+ AL + ++M V LP++ Y+ L+ GLC +GR
Sbjct: 375 ERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKM-VEKGVLPDANIYNVLMSGLCKKGRL 433
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM-IEKQRPVDFITYRT 365
A+ L EM + P + +LV +G+ EE K L+E+ IEK + Y
Sbjct: 434 PAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEA-KKLFELTIEKGIDPGVVGYNA 492
Query: 366 VLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLD 402
++ C+ G +A+ K + Q + D +TY+ ++D
Sbjct: 493 MIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIID 530
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ TA L G +I H E + LF+ + GI+P + N+MIKGY + DAL
Sbjct: 451 DAFITATLVDG---FIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDAL 507
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
F +M + + P+ F+Y +I G A + M + P+ +Y L++
Sbjct: 508 LCFKRM-IQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLING 566
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLID 393
L+G++ K +M+ + + +TY ++ C+ +A ++ L K L +
Sbjct: 567 FCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPN 626
Query: 394 GYTYTKLLDVLEDD 407
TY L++ L ++
Sbjct: 627 DVTYNYLMNGLTNN 640
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 63/275 (22%)
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
Q L +P E Y+TII + + L A+ +F M C+P++ +Y +L F
Sbjct: 515 QGLHSPD----EFTYSTIIDGYIKMNDLHGALRMFGLMVKG---ACKPNVVTYTLLINGF 567
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
G IN FKQM++ ++P++ + +I + ++ A F QM
Sbjct: 568 CLSGD---INRAEKT-----FKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQM- 618
Query: 282 VVYNYLPNSFSYDYLIHGL----------------------------------------- 300
++ LPN +Y+YL++GL
Sbjct: 619 LMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYN 678
Query: 301 ------CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
C K+A L D+M KGF+P S +L+ L L G ++ + + +
Sbjct: 679 SILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNE 738
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+ + Y LD +G+ EA +L L ++
Sbjct: 739 RELQVAVKYSEKLDAFLSQGQTSEASLILHSLADQ 773
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ L K M + + P + + +I + V+ AL + +++ +P+ FS + L+
Sbjct: 85 VESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLL 144
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
+ L G+ + A ++ DEM + + + +V L G+VE+ W++IEK+
Sbjct: 145 NVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDG----WKLIEKRWG 200
Query: 358 ----VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ + Y T++D C++G A L KEL+ K +
Sbjct: 201 RGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFL 239
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
VP S NSL++ L +G+VE K EM+++ VD T ++ +C+ G+ + K
Sbjct: 134 VPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWK 193
Query: 382 LLKELQNKN----------LIDGY 395
L+++ + LIDGY
Sbjct: 194 LIEKRWGRGCMPNIVFYNTLIDGY 217
>gi|296088922|emb|CBI38482.3| unnamed protein product [Vitis vinifera]
Length = 368
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 46/321 (14%)
Query: 83 KPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHI 142
KP D + R +++ + P +LC ++ L D +ELF WA Q + H Y++
Sbjct: 62 KP-FDLPELRTSLTRITPY----QLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYM 116
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS 202
+ KLGAA ++ D ++ QM E+L+ I+ + A +A + M+
Sbjct: 117 LIDKLGAAGEFKTTDALLMQM-KQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGV 175
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM-- 260
+ C P+ RSYN++ C GI +F + SM
Sbjct: 176 YS--CEPTFRSYNLVLDV-------------------CWL------GIALRLFPMFSMRY 208
Query: 261 --------IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
G L+ ++ L +F M + PN+ S + LI+GLC G ++A E
Sbjct: 209 VRKRTCSKCSGLQLAGNIEKGLALFEDM-MSKGLNPNNISCNILINGLCRTGNIQHALEF 267
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV-DFITYRTVLDEIC 371
+M +G P +YNSL++ L G +E + NL++ ++ + D ITY T++ C
Sbjct: 268 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL-NLFDKLQVEGICPDAITYNTLISWHC 326
Query: 372 RRGRAGEAMKLLKELQNKNLI 392
+ G +A LL + I
Sbjct: 327 KEGMFDDAHLLLSRGVDSGFI 347
>gi|224122828|ref|XP_002318926.1| predicted protein [Populus trichocarpa]
gi|222857302|gb|EEE94849.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 141/334 (42%), Gaps = 51/334 (15%)
Query: 89 TQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLG 148
T F + L + + L V+ D ++LF WAS Q RF H TY+ + KLG
Sbjct: 44 TDFDAKIQSLRNKLCPDYLIKVLKSTSDINSAVKLFKWASLQRRFNHTDDTYYWIIFKLG 103
Query: 149 AAKMYQEMDDVVNQMLA--TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
A+ +EM+ M+ P G E + +++ F +L+ A+ V M +
Sbjct: 104 MAENVEEMEGFCQNMVKDRCP---GVEDVLLSLVDAFVRNCRLNEALRVLFNMNLAG--- 157
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM------ 260
+PSI +N + A + K + + V++ +K+MV G+ P I +LN +
Sbjct: 158 IKPSIDVFNFVLGALVEE-KRGFQDVVFV------YKEMVKAGVAPSIDTLNYLLEVLFE 210
Query: 261 -----------------------------IKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
IKG I N V+D++ I H+M + LP
Sbjct: 211 TDRVDSALDQYRRINKKGCIPNSRTFEIVIKGLIAKNRVDDSVTILHEM-LELGCLPELR 269
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+ I C + R + L +MK F P Y +L+ L + ++E L EM
Sbjct: 270 FFRSTILLFCGEDRLQQGIRLFRKMKDSNFTPDPFIYGALIQCLCKHLRLDEAANLLEEM 329
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+E + D + +++ C+ G+ EA+KLL++
Sbjct: 330 MESRLTPDNNVFVDIVNGFCKLGKINEAIKLLED 363
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 110/276 (39%), Gaps = 41/276 (14%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
++ T+ I+ + L A + ++++ML +TI+ F E R L + + +
Sbjct: 232 NSRTFEIVIKGLIAKNRVDDSVTILHEMLELGCLPELRFFRSTILLFCGEDR-LQQGIRL 290
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ MK+S N P I Y L H+ ++ L ++M+ + PD
Sbjct: 291 FRKMKDS-NFTPDPFI--YGALIQCL--------CKHLRLDEAANLLEEMMESRLTPDNN 339
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF------------------------ 291
++ G+ +N+A+++ V N+
Sbjct: 340 VFVDIVNGFCKLGKINEAIKLLEDKHVHVTSPHNALLRCCCDADKFFMAKGLLEKMSERN 399
Query: 292 -----SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
S++ LI LC + NA EL M +P +Y++LV+ + E+ ++
Sbjct: 400 IDDCDSWNILIRWLCEKVGVMNAYELLGRMIISSLIPDCATYSALVAGNCRLSKYEDALQ 459
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
++ K +D +Y +++ +CR + EA+K+
Sbjct: 460 LFLQLHAKFWILDPASYSELIEGLCRGEKYLEAVKV 495
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 28/231 (12%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYIN-- 231
+Y +I + +L A + + M SR P + + F GK N I
Sbjct: 305 IYGALIQCLCKHLRLDEAANLLEEMMESR---LTPDNNVFVDIVNGFCKLGKINEAIKLL 361
Query: 232 ---HVYMET-----IRC------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
HV++ + +RC L ++M I+ D S N +I+ V
Sbjct: 362 EDKHVHVTSPHNALLRCCCDADKFFMAKGLLEKMSERNID-DCDSWNILIRWLCEKVGVM 420
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
+A + +M ++ + +P+ +Y L+ G C + ++A +L ++ K ++ SY+ L
Sbjct: 421 NAYELLGRM-IISSLIPDCATYSALVAGNCRLSKYEDALQLFLQLHAKFWILDPASYSEL 479
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
+ L + E VK M E + + +++ +++ +C G EA++L
Sbjct: 480 IEGLCRGEKYLEAVKVFCYMSENRCSLQSLSFNMLIEGVCNMGMLNEAVRL 530
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN-YLPNSFSYDYLIHGLCAQ 303
MVN+G+ PD +L ++ L+NH L +V + + +S Y+ LI+GL +
Sbjct: 604 MVNEGLVPDSDTLYKLLS--CLANHSQLYLISLSLDKLVSDCEVLDSAMYNILINGLWKE 661
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
G A L D M KG+VP S ++ L+ +
Sbjct: 662 GNKNEAHRLLDLMLEKGWVPDSMTHGLLIGS 692
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 23/285 (8%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLS 190
RF+ A Y + L +E +++ +M + +AL Y I+ + +++
Sbjct: 75 RFKRKAIAYSTIINWLCKLNRVEEARELIEKM---ARYAPPDALTYGPIVERLCKTKRID 131
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A+ + M +R + +P YN + + K +E R LF++MV I
Sbjct: 132 DALATVEEMA-TRGI--KPDAFIYNFVLSGLCQEEK--------VEEARLLFEKMVKQRI 180
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P++ + N++I G + + A +F +M Y+P SY+ LI G C + A+
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAG-KGYVPTEVSYNTLIDGFCKKKDLVAAK 239
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
++ D+M R VP+ +Y +L+ L+ +G+V+ + L M++K + TY ++D
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299
Query: 371 CRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL------DVLEDDF 408
C+ R EA KLL+++ + + TY LL D LED F
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAF 344
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 13/254 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + +L K + V +M AT +YN ++ + K+ A +
Sbjct: 113 DALTYGPIVERLCKTKRIDDALATVEEM-ATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 171
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ M R P++ +YN L + +ET LFK+M G P
Sbjct: 172 FEKMVKQR---INPNVVTYNTLINGLCKAWR--------IETAYELFKEMAGKGYVPTEV 220
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N++I G+ + A +F +M V N +PN +Y LI GL G+ + A E+ D
Sbjct: 221 SYNTLIDGFCKKKDLVAAKDVFDKM-VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDG 279
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +KG P+ +Y+ L+ V+E K L +M+ + +TY +L+ +CR +
Sbjct: 280 MVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADK 339
Query: 376 AGEAMKLLKELQNK 389
+A KL + + +
Sbjct: 340 LEDAFKLFRGMAQR 353
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 18/281 (6%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
LC ++E L LF KQ R + TY+ + L A + ++ +M A
Sbjct: 159 LCQEEKVEEARL----LFEKMVKQ-RINPNVVTYNTLINGLCKAWRIETAYELFKEM-AG 212
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
+ TE YNT+I F + + L A VF M S C P++ +Y L GK
Sbjct: 213 KGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS---NCVPNVVTYTTLIDGLSKSGK 269
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
V MV G+ P++ + + +I G+ V++A ++ QM V
Sbjct: 270 VQAAAEV--------LDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQM-VTQGI 320
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
P +Y+ L++ LC + ++A +L M ++ P+ +YN+L+ AL + +++ +
Sbjct: 321 APTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHR 380
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
EMI K P D ITY T+ + R G+ EA +L+++++
Sbjct: 381 LYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 13/226 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I +A ++ A +FK M + P+ SYN L F + V
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYV---PTEVSYNTLIDGFCKKKDLVAAKDV-- 241
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F +MV P++ + ++I G S V A + M V PN +Y
Sbjct: 242 ------FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGM-VKKGVTPNVATYSC 294
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C R A +L ++M +G P+ +YN L+++L ++E+ K M +++
Sbjct: 295 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 354
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKL 400
+TY T+L +C + A +L E+ K D TY L
Sbjct: 355 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 400
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%)
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+P + +++ + G GR + +E+ M G+ + Y L+S L G +E K
Sbjct: 7 IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
L M K+ I Y T+++ +C+ R EA +L++++ D TY +++ L
Sbjct: 67 LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERL 124
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 50/311 (16%)
Query: 133 FRHDASTYHIMTRKLGAA-----------KMYQEMDDVVNQMLATPSFC----------- 170
F+HD +T+ +M KL +A +M +E DV +L S C
Sbjct: 75 FKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILL--SICRAYGRIHKPLD 132
Query: 171 --------------GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
TE Y +++ E +L A F++ ++ R + P++ S N+
Sbjct: 133 SIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSA---FRFYRDMRKMGIPPTVTSLNV 189
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
L AF N M+ LF+ M N G EPD ++ ++I G + +A +
Sbjct: 190 LIKAFCK-------NSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKEL 242
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
+M P+ +Y +IHGLC A L ++MK K P+ +Y+SL+
Sbjct: 243 LQEMET-KGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFC 301
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGY 395
G L MI+K+ + I+Y T+L+ +C G+ EA+++ ++ + D
Sbjct: 302 KTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAG 361
Query: 396 TYTKLLDVLED 406
Y K+++ L D
Sbjct: 362 LYGKIVNCLCD 372
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 12/177 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I R + A + + M+ C PS+ +Y + +N+V
Sbjct: 223 YGTLINGLCRFRSIVEAKELLQEMETK---GCSPSVVTYTSIIHGLCQ------LNNVD- 272
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +R L + M + IEP++F+ +S++ G+ + H + A I M + PN SY
Sbjct: 273 EAMR-LLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELM-IQKRLRPNMISYST 330
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
L++GLC +G+ A E+ D MK +GF P + Y +V+ L +E L EM+
Sbjct: 331 LLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMV 387
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 121/290 (41%), Gaps = 53/290 (18%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D+ TY + L + E +++ +M T + Y +II+ + + A+ +
Sbjct: 219 DSYTYGTLINGLCRFRSIVEAKELLQEM-ETKGCSPSVVTYTSIIHGLCQLNNVDEAMRL 277
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ MK+ +N+E P++ +Y+ L F G ++ R + + M+ + P++
Sbjct: 278 LEDMKD-KNIE--PNVFTYSSLMDGFCKTGHSS--------RARDILELMIQKRLRPNMI 326
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM------------GVVYNYL---------------- 287
S ++++ G +N+AL IF +M G + N L
Sbjct: 327 SYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEM 386
Query: 288 ------PNSFSY-------DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
PN ++ + +IHGLC + A +L + +G + ++NSL+
Sbjct: 387 VLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKC 446
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
++ +T + L EM+ + T+++ C +A +AMKLL+
Sbjct: 447 FCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKLLQ 496
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I +AR L+RA+ F M+ R L RP+ R+Y L F +G +N Y
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMR-IRGL--RPNERTYTTLIDGFSRQG---LLNEAYR 410
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +M G P + + N+ I G+ + + +AL + +M V P+ SY
Sbjct: 411 -----ILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM-VEKGLAPDVVSYST 464
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C +G A ++ EM KG P + +Y+SL+ L + E EM++
Sbjct: 465 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
P D TY T+++ C G +A+ L E+ +K + D TY+ L++ L
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 574
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 16/280 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
+Y+++ L +E +++ +M F E YNT++ + + +A+ +
Sbjct: 286 SYNVIINGLCREGSMKEAWEILEEM-GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAE 344
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M RN PS+ +Y L + + + +N +N ME F QM G+ P+ +
Sbjct: 345 M--VRN-GVSPSVVTYTALINS-MCKARN--LNRA-ME----FFDQMRIRGLRPNERTYT 393
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I G+ +N+A RI ++M + P+ +Y+ IHG C R + A + EM
Sbjct: 394 TLIDGFSRQGLLNEAYRILNEM-TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 452
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG P SY++++S GE++ + EM+EK D +TY +++ +C R E
Sbjct: 453 KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTE 512
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLDV--LEDDFGNSIRHH 415
A L +E+ + L D +TYT L++ +E D ++ H
Sbjct: 513 ACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLH 552
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 128/274 (46%), Gaps = 18/274 (6%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEAR---KL 189
+ ++ + +M + M + + +N + + F YN+++ +R KL
Sbjct: 138 YNSSSAVFDLMVKSYSHLNMIDQAVNTIN-LAKSSGFMPGVLSYNSVLDAIVRSRGSVKL 196
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
S A V++ M SR P++ +YNIL F S G+ + + C F +M +G
Sbjct: 197 S-AEEVYREMIRSR---VSPNVYTYNILIRGFCSVGE-------LQKGLGC-FGEMERNG 244
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
P++ + N++I Y +++A + M PN SY+ +I+GLC +G K A
Sbjct: 245 CLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS-KGMQPNLISYNVIINGLCREGSMKEA 303
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
E+ +EM KGF P +YN+L++ G + + EM+ +TY +++
Sbjct: 304 WEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINS 363
Query: 370 ICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+C+ AM+ +++ + L + TYT L+D
Sbjct: 364 MCKARNLNRAMEFFDQMRIRGLRPNERTYTTLID 397
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 32/257 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YNT+I + + ++ A + K M +S+ ++ P++ SYN++ G
Sbjct: 252 YNTLIDAYCKMGRIDEAFGLLKSM-SSKGMQ--PNLISYNVIINGLCREGSMKEAWEILE 308
Query: 227 ------------------NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
N Y + +MV +G+ P + + ++I +
Sbjct: 309 EMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKAR 368
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++N A+ F QM + PN +Y LI G QG A + +EM GF PS +Y
Sbjct: 369 NLNRAMEFFDQMRI-RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 427
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+ + + +EE + + EM+EK D ++Y T++ CR+G A ++ +E+
Sbjct: 428 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 487
Query: 389 KNL-IDGYTYTKLLDVL 404
K + D TY+ L+ L
Sbjct: 488 KGVSPDAVTYSSLIQGL 504
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + + L + E D+ +ML E Y T+I + L++A+++
Sbjct: 493 DAVTYSSLIQGLCEMRRLTEACDLSQEMLDM-GLPPDEFTYTTLINAYCVEGDLNKALHL 551
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M + L P +Y++L + + E R LFK + + + D+
Sbjct: 552 HDEMIHKGFL---PDAVTYSVLINGLNKQARTR-------EAKRLLFKLIYEESVPSDVT 601
Query: 256 --------------SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
S+ ++IKG+ + +++A R+F M V N+ P Y+ +IHG C
Sbjct: 602 YDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM-VERNHKPGEAVYNVIIHGHC 660
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL---ALNGEVEETVKN 347
G A L EM GFVP + + +L+ AL +N E+ E + +
Sbjct: 661 RGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 709
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 86/225 (38%), Gaps = 27/225 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++I E R+L+ A + + M ++ P +Y L A+ G H++
Sbjct: 497 YSSLIQGLCEMRRLTEACDLSQEM---LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 553
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E M++ G PD + + +I G +A R+ ++ + +P+ +YD
Sbjct: 554 E--------MIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL-IYEESVPSDVTYDT 604
Query: 296 LIH---------------GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
LI G C +G A + + M + P YN ++ G
Sbjct: 605 LIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGN 664
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+ + EMI +T T++ + + G E +++ +
Sbjct: 665 LPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 709
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 15/241 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ + ++ A+ ++++N + P+ SYNI+ + +
Sbjct: 19 YNVVLNGICQEGRVDDAM---EFLENLPSYGGEPNTVSYNIVLKGLFTAER--------W 67
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L ++M + G P++ + N +I V A+ + Q+ Y PNS SY+
Sbjct: 68 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPK-YGCTPNSLSYNP 126
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+H C Q + A + M +G P SYN+L++AL NGEV+ + L ++ K
Sbjct: 127 LLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKG 186
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFGNSI 412
I+Y TV+D + + G+ EA++LL E+ +K L D TYT + L ED +I
Sbjct: 187 CSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAI 246
Query: 413 R 413
R
Sbjct: 247 R 247
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 16/277 (5%)
Query: 131 PRFRHDAST--YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
P + + +T Y+I+ + L A+ +++ + ++ +M A +N +I F
Sbjct: 43 PSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEM-AHKGCPPNVVTFNMLISFLCRRGL 101
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ A+ V + + C P+ SYN L AF + K M+ + MV+
Sbjct: 102 VEPAMEVLEQIPKYG---CTPNSLSYNPLLHAFCKQKK--------MDKAMAFVELMVSR 150
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G PDI S N+++ + V+ A+ + HQ+ P SY+ +I GL G+TK
Sbjct: 151 GCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKG-KGCSPVLISYNTVIDGLTKAGKTKE 209
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A EL DEM KG P +Y ++ S L ++EE ++ ++ + + Y +L
Sbjct: 210 ALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILL 269
Query: 369 EICRRGRAGEAMKLLK-ELQNKNLIDGYTYTKLLDVL 404
+C+R A+ L + N + + TYT L++ L
Sbjct: 270 GLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGL 306
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 16/264 (6%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQE--MDDVVNQMLATPSFCGTE--ALYNTIIYFFAEAR 187
R I+T + + QE +DD + + PS+ G YN ++ A
Sbjct: 6 EMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAE 65
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+ A K M+ + C P++ ++N+L + RG +E + +Q+
Sbjct: 66 RWEDAE---KLMEEMAHKGCPPNVVTFNMLISFLCRRG--------LVEPAMEVLEQIPK 114
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G P+ S N ++ + ++ A+ F ++ V P+ SY+ L+ LC G
Sbjct: 115 YGCTPNSLSYNPLLHAFCKQKKMDKAMA-FVELMVSRGCYPDIVSYNTLLTALCRNGEVD 173
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A +L ++K KG P SYN+++ L G+ +E ++ L EMI K D ITY T+
Sbjct: 174 VAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIA 233
Query: 368 DEICRRGRAGEAMKLLKELQNKNL 391
+CR + EA++ ++Q+ +
Sbjct: 234 SGLCREDKIEEAIRTFCKVQDMGI 257
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 6/182 (3%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +M + G PDI + N ++ G V+DA+ + Y PN+ SY+ ++ GL
Sbjct: 3 LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENL-PSYGGEPNTVSYNIVLKGL 61
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
R ++A +L +EM KG P+ ++N L+S L G VE ++ L ++ + +
Sbjct: 62 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL----EDDFGNSIRHH 415
++Y +L C++ + +AM ++ + ++ D +Y LL L E D + H
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181
Query: 416 LR 417
L+
Sbjct: 182 LK 183
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 14/219 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +++ F + +K+ +A+ + M SR C P I SYN L TA G+ +
Sbjct: 124 YNPLLHAFCKQKKMDKAMAFVELMV-SRG--CYPDIVSYNTLLTALCRNGE--------V 172
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L Q+ G P + S N++I G + +AL + +M + P+ +Y
Sbjct: 173 DVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEM-ISKGLQPDIITYTT 231
Query: 296 LIHGLCAQGRTKNA-RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+ GLC + + + A R C +++ G P+ YN+++ L E + MI
Sbjct: 232 IASGLCREDKIEEAIRTFC-KVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISN 290
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
+ TY +++ + G EA LL +L ++ +++
Sbjct: 291 GCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVVN 329
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 116/229 (50%), Gaps = 13/229 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
++I F + K +A + + +++S + P + +YN+L + S G+ +M+
Sbjct: 123 TSLIRGFCKIGKTRKATRIMEIIEDSGAV---PDVITYNVLISGMCSTGR-------WMD 172
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ L MV G P + + N +I + A+ + +M + PNS SY+ L
Sbjct: 173 AEK-LLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM-PKHGCTPNSLSYNPL 230
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+HG C + + + A E +M +G P +YN+L++AL +G+V+ V+ L ++ K
Sbjct: 231 LHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGC 290
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
ITY TV+D + + G+ +A KLL E++ K L D TY+ L+ L
Sbjct: 291 SPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGL 339
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 34/241 (14%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
T++I+ L + DV+ +M C +L YN +++ F + +K+ RA+ +
Sbjct: 191 TFNILINFLCRKGLLGRAIDVLEKM--PKHGCTPNSLSYNPLLHGFCKEKKMERAI---E 245
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTYINHVY 234
Y+ + C P I +YN L TA GK NT I+ +
Sbjct: 246 YLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLS 305
Query: 235 ----METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
+ L +M G++PDI + +S++ G V++A++ FH + V+ PN+
Sbjct: 306 KVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVL-GVKPNA 364
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y+ ++ GLC +T A + M ++G P+ SY L+ LA G +E ++ L E
Sbjct: 365 ITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNE 424
Query: 351 M 351
+
Sbjct: 425 L 425
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 106/242 (43%), Gaps = 16/242 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K+G + + +++ A P YN +I R + K + +
Sbjct: 131 KIGKTRKATRIMEIIEDSGAVPDV----ITYNVLISGMCST---GRWMDAEKLLADMVRR 183
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
C PS+ ++NIL +G + I L ++M G P+ S N ++ G+
Sbjct: 184 GCSPSVVTFNILINFLCRKG-------LLGRAIDVL-EKMPKHGCTPNSLSYNPLLHGFC 235
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ A+ +M Y P+ +Y+ L+ LC G+ A EL +++ KG P
Sbjct: 236 KEKKMERAIEYLGKMTSRGCY-PDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVL 294
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+YN+++ L+ G+ ++ K L EM K D ITY +++ + R G+ EA+K +
Sbjct: 295 ITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHD 354
Query: 386 LQ 387
L+
Sbjct: 355 LE 356
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 47/204 (23%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN--YLPNSFSYDYLIHG 299
+ MV G PDI S+I+G+ A RI M ++ + +P+ +Y+ LI G
Sbjct: 107 LESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRI---MEIIEDSGAVPDVITYNVLISG 163
Query: 300 LCAQGRTKNARELCDEMKRKGFVPS----------------------------------- 324
+C+ GR +A +L +M R+G PS
Sbjct: 164 MCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPN 223
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
S SYN L+ ++E ++ L +M + D +TY T+L +C+ G+ A++LL
Sbjct: 224 SLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLN 283
Query: 385 ELQNKN----LIDGYTYTKLLDVL 404
+L +K LI TY ++D L
Sbjct: 284 QLSSKGCSPVLI---TYNTVIDGL 304
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+ + + + + + R M V +P+ LI G C G+T+ A + + ++
Sbjct: 88 NNNLSKLVRNGELEEGFRFLESM-VYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIE 146
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
G VP +YN L+S + G + K L +M+ + +T+ +++ +CR+G G
Sbjct: 147 DSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLG 206
Query: 378 EAMKLLKEL 386
A+ +L+++
Sbjct: 207 RAIDVLEKM 215
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 152/340 (44%), Gaps = 55/340 (16%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
++ Q+D ++ LE FNW + Q H T+ I+ L + ++ + ++ ++ + S
Sbjct: 88 LLKTQKDYVLSLEFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSI 147
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVF----------KYMKNSRNLECR-------PSIR 212
L+ +++Y + R + +VF K +N+ + CR P++
Sbjct: 148 DFPSKLFESLLYSY---RLCDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVE 204
Query: 213 SYNILFTAFL--SRG------------KNTYINHVYMETIRC-------------LFKQM 245
S N ++ L SRG Y N + + C +F++M
Sbjct: 205 SCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEM 264
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALR---IFHQMGVVYNYLPNSFSYDYLIHGLCA 302
G P++ S N++I GY ++ A++ + + GV P+ +++ L++G C
Sbjct: 265 GTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVP----PDVVTFNTLVNGFCK 320
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
G+ + A +L EMK P++ +YN L++ + G E + EM Q D +T
Sbjct: 321 VGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILT 380
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
Y ++ +C+ G+ +A L++EL K L+ + T++ L+
Sbjct: 381 YNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%), Gaps = 14/234 (5%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
+VV + + T F A YNT+I + LS A+ + M+ + P + ++N L
Sbjct: 258 NVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKN---GVPPDVVTFNTL 314
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
F GK ++ LF +M + P + N +I GY + + R+F
Sbjct: 315 VNGFCKVGK--------LQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLF 366
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+M + + +Y+ LI GLC +G+TK A L E+ KG VP++ ++++L+ +
Sbjct: 367 EEMSR-FQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCV 425
Query: 338 NGEVEETVKNLWEMIEKQ-RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+ E + MI+ P D T+R +L C A++LL+E+ N++
Sbjct: 426 QKQSERAFQIYKSMIKSSFTPCD-QTFRMLLSTFCENEDYDGAVQLLEEMLNRH 478
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 19/236 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT++ F + KL A +F MK + P+ +YNIL + G N
Sbjct: 311 FNTLVNGFCKVGKLQEASKLFGEMKG---MSLSPTTVTYNILINGYSKAGNCEMGNR--- 364
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMGVVYNYLPNSFS 292
LF++M ++ DI + N++I G A +R + G+V PN+ +
Sbjct: 365 -----LFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLV----PNAST 415
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ LI+G C Q +++ A ++ M + F P +++ L+S N + + V+ L EM+
Sbjct: 416 FSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEML 475
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLEDD 407
+ + D + + + G+ AM L EL+ + L+ +G+ K +L D+
Sbjct: 476 NRHKAPDVNNLYELCAGLGQCGKVKTAMMLCSELEAQRLLPEGFDKLKAFGLLPDN 531
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 14/252 (5%)
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
QE +V+Q++ + +YNTII E R++ A+ V +M+ + RP + +
Sbjct: 160 QEAMSLVDQIVGL-GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEK---MGIRPDVIT 215
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN L T GK + + R L M+ GI PD+ + ++MI + + +A
Sbjct: 216 YNSLITRLFHSGK-------WGVSARIL-SDMMRMGIHPDVITFSAMIDVFGKEGQLLEA 267
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
+ + +M + + PN +Y+ LI+GLC G A+++ + M KGF P++ +YN+LV+
Sbjct: 268 KKQYDEM-IQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVN 326
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI- 392
+ V++ +K L M D TY T+ C+ G+ A K+L + + ++
Sbjct: 327 GYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLP 386
Query: 393 DGYTYTKLLDVL 404
D YT+ LLD L
Sbjct: 387 DIYTFNMLLDGL 398
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+I +YN L N H ++ + + MV+ G P+ + N+++ GY S
Sbjct: 281 PNIVTYNSLI--------NGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSK 332
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V+DA++I M GV ++F+Y+ L G C G+ A ++ M G +P
Sbjct: 333 RVDDAMKILCVMSHDGVD----GDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDI 388
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
++N L+ L +G++E+ + L ++ + + V ITY ++ +C+ + +A L
Sbjct: 389 YTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCS 448
Query: 386 LQNKNL-IDGYTYTKLL 401
L K + D TYT ++
Sbjct: 449 LALKGVSPDVITYTTMM 465
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 17/220 (7%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K + A+ +F M SR L PSI ++ L A K E + LF+ +
Sbjct: 53 KFNDALTLFCDMAESRPL---PSIVDFSRLLVAIAKLKK--------YEAVISLFRHIEI 101
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI D++S +++I + + ++ AL +M + + P+ ++ L++G C R +
Sbjct: 102 LGISHDLYSFSTLIDCFCRCSRLSLALSCLGKM-MKLGFEPSIVTFGSLVNGFCHVNRIQ 160
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ--RPVDFITYRT 365
A L D++ G+ P+ YN+++ +L N +V+ + L M EK RP D ITY +
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHM-EKMGIRP-DVITYNS 218
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
++ + G+ G + ++L ++ + D T++ ++DV
Sbjct: 219 LITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVF 258
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M +DG++ D F+ N++ +GY + N A ++ +M V LP+ ++++ L+ GLC G
Sbjct: 344 MSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARM-VSCGVLPDIYTFNMLLDGLCEHG 402
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ + A +++++ V +YN ++ + +VE+ + K D ITY
Sbjct: 403 KIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYT 462
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKN 390
T++ + R+ EA +L ++++ +
Sbjct: 463 TMMIGLRRKRLWLEAHELYRKMKKDD 488
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 145/371 (39%), Gaps = 82/371 (22%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT--- 166
++ L++DP + L+ F WA + F +Y ++ L A+MY + + + +++++
Sbjct: 102 LVELKQDPKLALKFFRWAKTKFGFCLTTESYCLLVHILFYARMYFDANFFLKELISSRRI 161
Query: 167 -PSFCGTEALYNT-------------IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
P F E L++T + F E L A F M R P R
Sbjct: 162 LPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVF---PKAR 218
Query: 213 SYNILFTAFLSRGKNTYINHVY---------------------------METIRCLFKQM 245
S N GK N + M T + LF QM
Sbjct: 219 SCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQM 278
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL---------- 287
G+ PDI + NS+I GY ++++ +F +M + YN L
Sbjct: 279 KQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQM 338
Query: 288 ----------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
PN +Y LI LC + + A + +M+R G P+ +Y SL
Sbjct: 339 PKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSL 398
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ A G + + +K EM++ Q + +TY T+LD +C+ GR EA L + + +
Sbjct: 399 IDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGV 458
Query: 392 IDGY-TYTKLL 401
TYT L+
Sbjct: 459 TPNLKTYTALV 469
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 124/267 (46%), Gaps = 29/267 (10%)
Query: 129 KQPRFRHDASTYHIMTR---KLGAAK----MYQEMDDVVNQMLATPSFCGTEAL-YNTII 180
KQ D TY+ + KLG +++EM DV C + + YN +I
Sbjct: 279 KQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVG---------CEPDVITYNALI 329
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
F + ++ +A + MKNS +P++ +Y+ L A H+ + I+
Sbjct: 330 NCFCKYEQMPKAFHFLHEMKNSG---LKPNVVTYSTLIDALCKE-------HMLQQAIKF 379
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L M G+ P+ F+ S+I + +++DAL++ +M V N +Y L+ GL
Sbjct: 380 LL-DMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGF-NVVTYTTLLDGL 437
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +GR A +L M + G P+ K+Y +LV N VE ++ L E+ EK+ D
Sbjct: 438 CKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDL 497
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ Y T++ +C + + E ++ E++
Sbjct: 498 LLYGTIIWGLCSQNKLEECEFVMSEMK 524
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT----AFLSRGKNTYI 230
LY TII+ KL +V MK IR+ ++++T A+ GK
Sbjct: 499 LYGTIIWGLCSQNKLEECEFVMSEMKAC-------GIRANSVIYTIRMDAYFKTGKT--- 548
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
+E + L ++M + G+E I + +I G V +A+ F +M +N PN+
Sbjct: 549 ----VEALN-LLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMAD-FNLQPNN 602
Query: 291 FSY-DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ LI GLC + A++L DEM+ K VP +Y +L+ + + +E +
Sbjct: 603 VAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRS 662
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
M E +D Y +++ + + +A L E+ K ++
Sbjct: 663 RMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIV 705
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF+ M+ G+ P++ + +++ G+I + V +AL + + P+ Y +I GL
Sbjct: 449 LFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALEL-LKEIKEKKIKPDLLLYGTIIWGL 507
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C+Q + + + EMK G +S Y + A G+ E + L EM + V
Sbjct: 508 CSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTI 567
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+T+ ++D +C++G EA+ + + NL
Sbjct: 568 VTFCVLIDGLCKKGLVEEAIDYFARMADFNL 598
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 107/261 (40%), Gaps = 18/261 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEAR--KLSRAV 193
D Y + L + +E + V+++M A CG A N++IY K + V
Sbjct: 496 DLLLYGTIIWGLCSQNKLEECEFVMSEMKA----CGIRA--NSVIYTIRMDAYFKTGKTV 549
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
++ +L +I ++ +L +G +E F +M + ++P+
Sbjct: 550 EALNLLQEMCDLGVEVTIVTFCVLIDGLCKKG--------LVEEAIDYFARMADFNLQPN 601
Query: 254 -IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ ++I G +N++ A ++F +M N +P+ +Y LI G + A +
Sbjct: 602 NVAVCTALIDGLCKNNYIEAAKKLFDEMQD-KNMVPDKIAYTALIDGNLKHKDFQEALNI 660
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
M G +Y SLV L+ V++ L EMI K D I +L +
Sbjct: 661 RSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYE 720
Query: 373 RGRAGEAMKLLKELQNKNLID 393
G EA++L EL K +D
Sbjct: 721 LGSIDEAIELHDELLKKVPLD 741
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 133/286 (46%), Gaps = 22/286 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D Y+ + L KM + D + ++M+ A P F + T+I+ + +++A
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDF----YTFTTLIHGHCQDGNMTKA 382
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F M RN+ +P I +YN L F G+ ME L+ M++ I P
Sbjct: 383 LSLFGTM-TQRNI--KPDIVAYNTLIDGFCKVGE--------MEKASELWDGMISRKIFP 431
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + +I Y HV++A R++ M + P + + +I G C G + A E
Sbjct: 432 NHITYGILINAYCSVGHVSEAFRLWDVM-IEKGIKPTLVTCNTVIKGYCRSGDSSKADEF 490
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
M KG P SYN+L++ +++ + +M ++ D ITY V++ CR
Sbjct: 491 LGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCR 550
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSIRHH 415
+GR EA +L+++ K + D TYT L++ V +D+ + R H
Sbjct: 551 QGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFH 596
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 128/292 (43%), Gaps = 33/292 (11%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T +IM L + ++ +++M + YNT+I + L A F+
Sbjct: 120 TLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADM-VTYNTLIGAYCREGLLEEA---FEI 175
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGK-------------------NTYINHVYMETIR 239
M + + +PS+ +YN + +G+ T N + +E+ R
Sbjct: 176 MNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCR 235
Query: 240 --------CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+F +M+ G+ PD+ S +S+I + + H++ AL F M + +P++
Sbjct: 236 RDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK-FGLVPDNV 294
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
Y L+HG C G A ++ DEM +G V +YN++++ L + + K EM
Sbjct: 295 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 354
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+E+ DF T+ T++ C+ G +A+ L + +N+ D Y L+D
Sbjct: 355 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 109/261 (41%), Gaps = 53/261 (20%)
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKN 201
M R+ G +++ + ++ +V+ M CGT L ++ +I + +ARKL F+ +++
Sbjct: 21 MIRRSGVSRV-EVVEALVSSMCGN---CGTNNLVFDLLIRTYVQARKLREGTEAFRILRS 76
Query: 202 SRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMI 261
L SI + N L + ++E + +++V GIE ++++LN M+
Sbjct: 77 KGYL---VSINACNSLLGGLVKID--------WVELAWEVHREVVRSGIELNVYTLNIMV 125
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+ LC G+ + + EM+ G
Sbjct: 126 ------------------------------------NALCKDGKFDDVKSFLSEMEGNGI 149
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+YN+L+ A G +EE + + M +K TY +++ +C++GR A
Sbjct: 150 YADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKG 209
Query: 382 LLKELQNKNLI-DGYTYTKLL 401
+L E+ N L D TY LL
Sbjct: 210 ILIEMLNIGLSPDTTTYNTLL 230
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I +A + AV VFK ++ CRP++ +YN++ + G +
Sbjct: 223 YTSLITAYASNGRYREAVMVFKKLEEEG---CRPTLITYNVILNVYGKMG-------MPW 272
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
I L M + G+ PD+++ N++I + +A +F +M + P+ +Y+
Sbjct: 273 SKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAA-GFSPDKVTYNA 331
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ R + A E+ EM+ GF PS +YNSL+SA A +G ++E ++ +M++K
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKG 391
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
D TY T+L + G+ AMK+ +E++
Sbjct: 392 IKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR 423
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 46/287 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + +Y+E +V +M A F + YN ++ + ++R+ A+ V
Sbjct: 290 DLYTYNTLISSCRRGSLYEEAAEVFEEMKAA-GFSPDKVTYNALLDVYGKSRRPREAMEV 348
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
K M+ S PSI +YN L +A+ G ++ L QMV GI+PD+F
Sbjct: 349 LKEMEASG---FAPSIVTYNSLISAYARDG--------LLDEAMELKSQMVKKGIKPDVF 397
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVV--------YNYL-------------------- 287
+ +++ G+ + + A+++F +M V +N L
Sbjct: 398 TYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457
Query: 288 ------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
P+ +++ L+ G + EMKR GFVP ++N+L+SA + G
Sbjct: 458 KICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFF 517
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
++ + M++ D TY VL + R G ++ K+L E+++
Sbjct: 518 DQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKD 564
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 41/249 (16%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K RA + + + RN I +Y L TA+ S G+ Y E + +FK++
Sbjct: 197 KEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGR-------YREAV-MVFKKLEE 248
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-------------PNSFSYD 294
+G P + + N + L ++ +MG+ ++ + P+ ++Y+
Sbjct: 249 EGCRPTLITYNVI-------------LNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYN 295
Query: 295 YLIHGLCAQGRT-KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI C +G + A E+ +EMK GF P +YN+L+ + E ++ L EM
Sbjct: 296 TLISS-CRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEA 354
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLE----DDF 408
+TY +++ R G EAM+L ++ K + D +TYT LL E DD+
Sbjct: 355 SGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDY 414
Query: 409 GNSIRHHLR 417
+ +R
Sbjct: 415 AMKVFEEMR 423
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ A ++ V MK+ R C+P+ +Y L A Y N +
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGR---CKPNELTYCSLLHA--------YANGKEV 587
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +++ + IEP L +++ Y S+ + + R F ++ + P+ + +
Sbjct: 588 ERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELRE-QGFSPDITTLNA 646
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ + E+ + +K GF PS +YNSL+ + E++ L E+I K
Sbjct: 647 MVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKG 706
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D I++ TV+ CR GR EA ++ E+++ L D TY +
Sbjct: 707 MKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFI 753
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I A VF+ MK + P +YN L + GK+ M
Sbjct: 294 YNTLISSCRRGSLYEEAAEVFEEMKAAG---FSPDKVTYNALLDVY---GKSRRPREA-M 346
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + K+M G P I + NS+I Y +++A+ + QM V P+ F+Y
Sbjct: 347 EVL----KEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQM-VKKGIKPDVFTYTT 401
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G G+ A ++ +EM+ G P+ ++N+L+ G E +K E+ +
Sbjct: 402 LLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICE 461
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D +T+ T+L + G E + KE++ +
Sbjct: 462 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 498
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
+ G P + + NS++ Y + H + I ++ + P+ S++ +I C GR
Sbjct: 669 DSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREI-IAKGMKPDIISFNTVIFAYCRNGRM 727
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
K A + EMK G P +YN+ +++ A + E + + MI+ + + TY ++
Sbjct: 728 KEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSL 787
Query: 367 LDEICRRGRAGEAMKLLKELQN 388
+D C+ R EA + L+N
Sbjct: 788 IDWFCKLNRRDEANSFISNLRN 809
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 125/268 (46%), Gaps = 38/268 (14%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ + R+ +A VF+ M P +RS+NIL F G+ Y
Sbjct: 230 YNSVLKGLCKHRRFDKAKEVFRTMDQC---SVAPDVRSFNILIGGFCRVGEVKEAVKFYK 286
Query: 236 E-----------TIRCL----------------FKQMVNDGIEPDIFSLNSMIKGYILSN 268
E + CL ++M G+ PD +I G+ +
Sbjct: 287 EMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAG 346
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++ALR+ +M V + LP+ +Y+ L++GLC Q R +A +L +EM+ +G P ++
Sbjct: 347 SMSEALRVRDEM-VGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTF 405
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ G E ++ ++ ++ D +TY +++D +CR+G +A +L ++
Sbjct: 406 TTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHA 465
Query: 389 KNLIDGY-TYTKLLDV------LEDDFG 409
+ ++ + TY+ L+D +ED FG
Sbjct: 466 REILPNHITYSILIDSHCEKGQVEDAFG 493
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+Y +I F A +S A+ V M C P + +YN L + H
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVG---FGCLPDVVTYNTLLNGLCKQ-------HRL 383
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++ + L +M G+ PD+ + ++I GY + +AL++F + + P+ +Y+
Sbjct: 384 LDAEK-LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTL-LRQRLRPDVVTYN 441
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI G+C +G A EL D+M + +P+ +Y+ L+ + G+VE+ L EM++K
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKK 501
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ TY +++ CR G + + L++++ N+ D T+ L+
Sbjct: 502 GNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLI 549
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + ++N+L A G ++ L M N G++P I + NS++KG
Sbjct: 190 PDVVTHNVLIDARFRAGD--------VDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHR 241
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A +F M + P+ S++ LI G C G K A + EM+ + P S+
Sbjct: 242 RFDKAKEVFRTMDQC-SVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSF 300
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ L+ + GE++ L EM D + Y V+ CR G EA+++ E+
Sbjct: 301 SCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVG 360
Query: 389 KN-LIDGYTYTKLLDVL 404
L D TY LL+ L
Sbjct: 361 FGCLPDVVTYNTLLNGL 377
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 122/288 (42%), Gaps = 40/288 (13%)
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS 202
M+R+ GA++ ++V+ +LA+ S +++ +I + ++RK A F+ + +
Sbjct: 63 MSRRRGASRR-----EIVSSLLAS-SPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDH 116
Query: 203 RNLECRPSIRSYNILFTAFLSRGK-------------------NTY----INHVYMETIR 239
R P S + A LSR N Y + H Y +T+
Sbjct: 117 R----VPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLE 172
Query: 240 -----CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+ +M + PD+ + N +I + V+ A+ + M P +Y+
Sbjct: 173 FDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM-ANRGLKPGIVTYN 231
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ GLC R A+E+ M + P +S+N L+ GEV+E VK EM +
Sbjct: 232 SVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHR 291
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D +++ ++ RRG A L+E++ L+ DG YT ++
Sbjct: 292 YVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVI 339
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 115/270 (42%), Gaps = 28/270 (10%)
Query: 95 VSELPPRFNNEELCNVMTL------QEDPLVCLELFNWASKQPRFRHDASTYHI----MT 144
++E+ R +LC TL Q + L+LF+ +Q R R D TY+ M
Sbjct: 390 LNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ-RLRPDVVTYNSLIDGMC 448
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
RK AK + DD + Y+ +I E ++ A M N
Sbjct: 449 RKGDLAKANELWDD-----MHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGN 503
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
L P+IR+YN + + R N +++ +R D + PD+ + N++I GY
Sbjct: 504 L---PNIRTYNSIIKGY-CRSGNVKKGQQFLQKMR-------QDNVFPDLITFNTLIHGY 552
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
I +++ A +F+ M P++ +Y+ +I+G QG ++A + M G P
Sbjct: 553 IKEENMHGAFNVFNIMEKEM-VRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPD 611
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+Y SL++ G ++ + EMI +
Sbjct: 612 RYTYMSLINGHVTAGNSKQAFQLHDEMIHR 641
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 110/274 (40%), Gaps = 39/274 (14%)
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
R L A K+ EM+ + TP C + T+I+ + A+ +F + R
Sbjct: 382 RLLDAEKLLNEME----ERGVTPDLC----TFTTLIHGYCRQGNFENALQLFDTLLRQR- 432
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVY---------------------------MET 237
RP + +YN L +G N ++ +E
Sbjct: 433 --LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVED 490
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+MV G P+I + NS+IKGY S +V + +M N P+ +++ LI
Sbjct: 491 AFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKM-RQDNVFPDLITFNTLI 549
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
HG + A + + M+++ P + +YN +++ + G +++ + M +
Sbjct: 550 HGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIE 609
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D TY ++++ G + +A +L E+ ++
Sbjct: 610 PDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGF 643
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 139/332 (41%), Gaps = 43/332 (12%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPS- 168
++ LQ D ++ L+ FNW H T+ + L + ++ + ++++ T S
Sbjct: 75 LLKLQNDAVLSLKFFNWVQTHNPNSHTLHTHSFLLHILTKNRNFKTAQSIFSKIITTNSN 134
Query: 169 ----------FCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
C + L ++T+ FA KL A F MK P++ S N
Sbjct: 135 LFESLLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFF---PTVESCNAF 191
Query: 218 FTAFLSRGKNTYINHVYMETIR-----------------C----------LFKQMVNDGI 250
++ L + + Y + R C + ++M + G+
Sbjct: 192 LSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGL 251
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P++ + NS+I GY + AL++ M PN +++ LI+G C +G+ A
Sbjct: 252 CPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEAN 311
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ EMK P+ +YN+L++ G E + EM + D +TY ++ +
Sbjct: 312 RVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGL 371
Query: 371 CRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
C+ G+ +A ++KEL NL+ + T++ L+
Sbjct: 372 CKEGKTKKAAYMVKELDKGNLVPNASTFSALI 403
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I F + KL A VF MK + P++ +YN L F G +
Sbjct: 294 FNTLINGFCKEGKLHEANRVFSEMKLA---NVAPNVVTYNTLINGFGQAGNS-------- 342
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF++M + ++ DI + N +I G A + ++ N +PN+ ++
Sbjct: 343 EMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDK-GNLVPNASTFSA 401
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C + ++ A + M R GF P+ ++ L SA N + + V+ L +M+E+
Sbjct: 402 LIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERF 461
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D V +CR GR A+ L E++ K L+ G+ K++
Sbjct: 462 MTPDSSILSEVYSGLCRCGRKQFALMLCSEIEAKRLLPQGFDREKIV 508
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 126/238 (52%), Gaps = 10/238 (4%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
AKM++E++++ N +L++ + +++ FA++ + +A F++++ SR E +P
Sbjct: 52 AKMHEEIEELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQFVR-SRFPENKP 110
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
I YN+L + + + +++ +Y + + C GI P+ ++ N +I+ S+
Sbjct: 111 GIYLYNVLLESCIRERRVEFVSWLYKDMVLC--------GISPETYTFNLLIRALCDSSC 162
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
V+ A +F +M PN F++ L+ G C G T EL + M+ G +P+ YN
Sbjct: 163 VDAARELFDEM-PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYN 221
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
++VS+ G +++ K + +M E+ D +T+ + + +C+ G+ +A ++ +++
Sbjct: 222 TIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 125/246 (50%), Gaps = 22/246 (8%)
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
+ L A++++ +M+ +++ L P YN ++ F + L A +F+ ++ + +
Sbjct: 267 KVLDASRIFSDME--LDEYLGLPR--PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
L S++SYNI + GK + ET+ KQM++ GI P I+S N ++ G
Sbjct: 323 L---VSLQSYNIWLQGLVRHGK-----FIEAETV---LKQMIDKGIGPSIYSYNILMDGL 371
Query: 265 ILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
++DA I M GV P++ +Y L+HG C+ G+ A+ L EM R
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVS----PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P++ + N L+ +L G + E + L +M EK +D +T ++D +C G +A++
Sbjct: 428 LPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 382 LLKELQ 387
++K ++
Sbjct: 488 IVKGMR 493
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N I+ + +L +A+ + K M+ + +A L N+YI V
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMR---------------VHGSAALGNLGNSYIGLVD-- 512
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
++ + PD+ + ++++ G + +A +F +M + P+S +Y+
Sbjct: 513 ------DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEM-MGEKLQPDSLAYNIF 565
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
IH C QG+ +A + +M++KG S ++YNSL+ L + ++ E + EM EK
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGI 625
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ TY T + +C G+ +A LL E+ KN+
Sbjct: 626 SPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNI 660
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 106/278 (38%), Gaps = 47/278 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + L A + E + +M+ + A YN I+ F + K+S A
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLA-YNIFIHHFCKQGKISSA--- 578
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ +K+ C S+ +YN L + N ++ I L +M GI P+I
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIK------NQIF--EIHGLMDEMREKGISPNIC 630
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC-------------- 301
+ N+ I+ V DA + +M + N PN FS+ YLI C
Sbjct: 631 TYNTAIQYLCEGGKVEDATNLLDEM-MQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFET 689
Query: 302 --------------------AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
A G+ A EL + + +GF + Y LV +L E+
Sbjct: 690 AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDEL 749
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
E L +MI+K D V+D + + G EA
Sbjct: 750 EVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEA 787
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 11/231 (4%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC-RPSIRSYNILFTAFLSRGKNTYINHVY 234
+N+ I + K+ A +F M+ L RP+ +YN++ F G
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVG--------L 306
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E + LF+ + + + S N ++G + +A + QM + P+ +SY+
Sbjct: 307 LEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQM-IDKGIGPSIYSYN 365
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GLC G +A+ + MKR G P + +Y L+ G+V+ L EM+
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ T +L + GR EA +LL+++ K +D T ++D L
Sbjct: 426 NCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 9/166 (5%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P + +Y+ L G+ + LF +M+ + ++PD + N I +
Sbjct: 520 CLPDLITYSTLLNGLCKAGR--------FAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCK 571
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++ A R+ M + + +Y+ LI GL + + L DEM+ KG P+
Sbjct: 572 QGKISSAFRVLKDMEKKGCH-KSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNIC 630
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+YN+ + L G+VE+ L EM++K + +++ ++ C+
Sbjct: 631 TYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCK 676
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I +AR L+RA+ F M+ R L RP+ R+Y L F +G +N Y
Sbjct: 153 YTALINSMCKARNLNRAMEFFDQMR-IRGL--RPNERTYTTLIDGFSRQG---LLNEAYR 206
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +M G P + + N+ I G+ + + +AL + +M V P+ SY
Sbjct: 207 -----ILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM-VEKGLAPDVVSYST 260
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C +G A ++ EM KG P + +Y+SL+ L + E EM++
Sbjct: 261 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 320
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
P D TY T+++ C G +A+ L E+ +K + D TY+ L++ L
Sbjct: 321 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 370
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 16/280 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
+Y+++ L +E +++ +M F E YNT++ + + +A+ +
Sbjct: 82 SYNVIINGLCREGSMKEAWEILEEM-GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAE 140
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M RN PS+ +Y L + + + +N +N ME F QM G+ P+ +
Sbjct: 141 M--VRN-GVSPSVVTYTALINS-MCKARN--LNRA-ME----FFDQMRIRGLRPNERTYT 189
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I G+ +N+A RI ++M + P+ +Y+ IHG C R + A + EM
Sbjct: 190 TLIDGFSRQGLLNEAYRILNEM-TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 248
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG P SY++++S GE++ + EM+EK D +TY +++ +C R E
Sbjct: 249 KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTE 308
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLDV--LEDDFGNSIRHH 415
A L +E+ + L D +TYT L++ +E D ++ H
Sbjct: 309 ACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLH 348
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 32/257 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YNT+I + + ++ A + K M +S+ ++ P++ SYN++ G
Sbjct: 48 YNTLIDAYCKMGRIDEAFGLLKSM-SSKGMQ--PNLISYNVIINGLCREGSMKEAWEILE 104
Query: 227 ------------------NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
N Y + +MV +G+ P + + ++I +
Sbjct: 105 EMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKAR 164
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++N A+ F QM + PN +Y LI G QG A + +EM GF PS +Y
Sbjct: 165 NLNRAMEFFDQM-RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 223
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+ + + +EE + + EM+EK D ++Y T++ CR+G A ++ +E+
Sbjct: 224 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 283
Query: 389 KNL-IDGYTYTKLLDVL 404
K + D TY+ L+ L
Sbjct: 284 KGVSPDAVTYSSLIQGL 300
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +YNIL F S G+ + + C F +M +G P++ + N++I Y
Sbjct: 8 PNVYTYNILIRGFCSVGE-------LQKGLGC-FGEMERNGCLPNVVTYNTLIDAYCKMG 59
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A + M PN SY+ +I+GLC +G K A E+ +EM KGF P +Y
Sbjct: 60 RIDEAFGLLKSMSS-KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY 118
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L++ G + + EM+ +TY +++ +C+ AM+ +++
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178
Query: 389 KNL-IDGYTYTKLLD 402
+ L + TYT L+D
Sbjct: 179 RGLRPNERTYTTLID 193
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F +L + + F M+ RN C P++ +YN L A+ G+ I+ +
Sbjct: 13 YNILIRGFCSVGELQKGLGCFGEME--RN-GCLPNVVTYNTLIDAYCKMGR---IDEAF- 65
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L K M + G++P++ S N +I G + +A I +MG + P+ +Y+
Sbjct: 66 ----GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMG-YKGFTPDEVTYNT 120
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM-IEK 354
L++G C +G A + EM R G PS +Y +L++++ + ++ +M I
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
RP + TY T++D R+G EA ++L E+
Sbjct: 181 LRPNER-TYTTLIDGFSRQGLLNEAYRILNEM 211
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M+ + P++++ N +I+G+ + L F +M LPN +Y+ LI C G
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEM-ERNGCLPNVVTYNTLIDAYCKMG 59
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R A L M KG P+ SYN +++ L G ++E + L EM K D +TY
Sbjct: 60 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119
Query: 365 TVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
T+L+ C+ G +A+ + E+ +N TYT L++ +
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSM 160
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + + L + E D+ +ML E Y T+I + L++A+++
Sbjct: 289 DAVTYSSLIQGLCEMRRLTEACDLSQEMLDM-GLPPDEFTYTTLINAYCVEGDLNKALHL 347
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M + L P +Y++L + + E R LFK + + + D+
Sbjct: 348 HDEMIHKGFL---PDAVTYSVLINGLNKQARTR-------EAKRLLFKLIYEESVPSDVT 397
Query: 256 --------------SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
S+ ++IKG+ + +++A R+F M V N+ P Y+ +IHG C
Sbjct: 398 YDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM-VERNHKPGEAVYNVIIHGHC 456
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL---ALNGEVEETVKN 347
G A L EM GFVP + + +L+ AL +N E+ E + +
Sbjct: 457 RGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 505
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 86/225 (38%), Gaps = 27/225 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++I E R+L+ A + + M ++ P +Y L A+ G H++
Sbjct: 293 YSSLIQGLCEMRRLTEACDLSQEM---LDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 349
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E M++ G PD + + +I G +A R+ ++ + +P+ +YD
Sbjct: 350 E--------MIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL-IYEESVPSDVTYDT 400
Query: 296 LIH---------------GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
LI G C +G A + + M + P YN ++ G
Sbjct: 401 LIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGN 460
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+ + EMI +T T++ + + G E +++ +
Sbjct: 461 LPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 505
>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 481
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 13/298 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSKTSEHALQFFXWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YNALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA LKE+ +K L
Sbjct: 229 GYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDKYL 286
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMING 194
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
+ K ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 195 YYRVKK--------MEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDKYLAPTDNSIFMRLISSHCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L M P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDII 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 98/184 (53%), Gaps = 9/184 (4%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + +Y++L K M+ LF +M++ G+ P+ + ++I G+ +
Sbjct: 201 QPDVYTYSVLINGLCKESK--------MDDANELFDEMLDKGMVPNGVTFTTLIDGHCKN 252
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A +L DEM +G P +
Sbjct: 253 GRVDLAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKIT 311
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L+ G++E ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E+
Sbjct: 312 YTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREML 371
Query: 388 NKNL 391
+ L
Sbjct: 372 SVGL 375
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 122/280 (43%), Gaps = 16/280 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FRH +Y M L +M E ++ +++ A++ I+ E + R+
Sbjct: 7 FRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIL----ETKGTQRS 62
Query: 193 -VYVFK-----YMKNS---RNLECRPSIRSYNILFTAFLSRGKNTYINHV-YMETIRCLF 242
+YVF Y+++ +EC R + R ++ + Y + + +
Sbjct: 63 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFY 122
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
K+++ G ++ N +++ + + A + + + + P+ S++ LI+G
Sbjct: 123 KEILECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAI-TKWGLRPSVVSFNTLINGYIR 181
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
G L M G P +Y+ L++ L ++++ + EM++K + +T
Sbjct: 182 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVT 241
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ T++D C+ GR AM++ K++ +++L D TY L+
Sbjct: 242 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 281
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 15/191 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY ++ L + +++ ++ML + T+I + ++ A+ +
Sbjct: 203 DVYTYSVLINGLCKESKMDDANELFDEML-DKGMVPNGVTFTTLIDGHCKNGRVDLAMEI 261
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+K M S++L P + +YN L +G+ ++ L +M +G++PD
Sbjct: 262 YKQML-SQSLS--PDLITYNTLIYGLCKKGE--------LKQAHDLIDEMSMEGLKPDKI 310
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVY-NYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ ++I G + A HQ ++ N + Y LI GLC +GR+ +A ++
Sbjct: 311 TYTTLIDGCCKEGDMETAFE--HQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLR 368
Query: 315 EMKRKGFVPSS 325
EM G P++
Sbjct: 369 EMLSVGLKPNT 379
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 13/254 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+I+ L +++ V+++MLA + T ++ ++ ++ +RK A + +
Sbjct: 622 TYNILIGGLCKTGAIEKVISVLHEMLAV-GYVPTPIIHKFLLKAYSRSRK---ADAILQI 677
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
K ++ + YN L T G N V E MV GI DI + N
Sbjct: 678 HKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTE--------MVIKGISADIVTYN 729
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I+GY +HV A + QM +V PN +Y+ L+ GL G ++A +L EM+
Sbjct: 730 ALIRGYCTGSHVEKAFNTYSQM-LVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRE 788
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G VP++ +YN LVS G +++K EMI K TY ++ + + G+ +
Sbjct: 789 RGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQ 848
Query: 379 AMKLLKELQNKNLI 392
A +LL E+ + I
Sbjct: 849 ARELLNEMLTRGRI 862
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 115/240 (47%), Gaps = 18/240 (7%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
NT++ + E +SRA +++ +P I +YN L AF RG V E
Sbjct: 149 NTLVDGYCEVGLVSRA---LDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNE 205
Query: 237 TI---RCLFKQMVND-GIE---------PDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
+ R ++ND G+E P + + ++I Y ++D ++ QM ++
Sbjct: 206 ILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQM-IM 264
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+P+ + +++GLC G+ A L EM G P+ SY +++SAL +G V E
Sbjct: 265 SGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVME 324
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ +M+ + +D + T++D + + G++ EA ++ + + NL+ + TYT LLD
Sbjct: 325 AFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLD 384
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 14/216 (6%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVYM 235
++I+Y KL+ A + + M N+ P+ SY + +A L G+ NH
Sbjct: 275 SSILYGLCRHGKLTEAAMLLREM---YNMGLDPNHVSYTTIISALLKSGRVMEAFNHQ-- 329
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
QMV GI D+ +M+ G + +A +F + + N +PN +Y
Sbjct: 330 -------SQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTI-LKLNLVPNCVTYTA 381
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C G + A + +M+++ +P+ +++S+++ A G + + V+ L +M++
Sbjct: 382 LLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMN 441
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ Y +LD R G+ A KE+++ L
Sbjct: 442 IMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGL 477
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
R L PS+ +N L F + G ++ ++ L+ +MV G+ P++FS+N ++
Sbjct: 2 RALSLVPSLPLWNDLLYEFNASG--------FVSQVKVLYSEMVLCGVVPNVFSVNLLVH 53
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSF----SYDYLIHGLCAQGRTKNARELCDEMKR 318
+L +G+ YL NS +Y+ ++ G C +G L EM +
Sbjct: 54 ----------SLCKVGDLGLALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVK 103
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG S + N LV G V+ + ++ P+D I T++D C G
Sbjct: 104 KGVCFDSVTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSR 163
Query: 379 AMKLLKE-LQNKNLIDGYTYTKLLD 402
A+ L+++ +N D TY L++
Sbjct: 164 ALDLVEDGWKNGVKPDIVTYNTLVN 188
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 80/157 (50%), Gaps = 1/157 (0%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E + ++M + + P++ + +S+I GY +N A+ + +M V N +PN F Y
Sbjct: 392 VEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKM-VQMNIMPNVFVYA 450
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ G G+ + A EMK G ++ ++ L++ L +G ++E + +++ K
Sbjct: 451 ILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSK 510
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+D Y +++D + G A+ +++E+ K++
Sbjct: 511 GIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDM 547
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 114/275 (41%), Gaps = 20/275 (7%)
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEA 186
+ + D Y+ +T+ L Y E V ++M+ TP C T YN+++ +
Sbjct: 544 EKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPD-CVT---YNSVMNTYFIQ 598
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
K A+ + MK+ + P++ +YNIL G +E + + +M+
Sbjct: 599 GKTENALDLLNEMKSYGVM---PNMVTYNILIGGLCKTGA--------IEKVISVLHEML 647
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
G P ++K Y S + L+I H+ V N Y+ LI LC G T
Sbjct: 648 AVGYVPTPIIHKFLLKAYSRSRKADAILQI-HKKLVDMGLNLNQMVYNTLITVLCRLGMT 706
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
K A + EM KG +YN+L+ VE+ +M+ + TY +
Sbjct: 707 KKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNAL 766
Query: 367 LDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
L+ + G +A KL+ E++ + L+ T +L
Sbjct: 767 LEGLSTNGLMRDADKLVSEMRERGLVPNATTYNIL 801
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 102/236 (43%), Gaps = 51/236 (21%)
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+ +P++ ++ L A Y H ++ L++QM+ G+ PD+ + +S++ G
Sbjct: 231 DLQPTVVTWTTLIAA--------YCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLC 282
Query: 266 LSNHVNDA---LRIFHQMGVVYNYLPNSFSYDYLI------------------------- 297
+ +A LR + MG+ PN SY +I
Sbjct: 283 RHGKLTEAAMLLREMYNMGLD----PNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGIS 338
Query: 298 ----------HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
GL G++K A E+ + + VP+ +Y +L+ G+VE
Sbjct: 339 IDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETV 398
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
L +M ++ + +T+ ++++ ++G +A+++L+++ N++ + + Y LLD
Sbjct: 399 LQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLD 454
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+++II +A+ L++AV V + M + P++ Y IL + G++
Sbjct: 414 FSSIINGYAKKGMLNKAVEVLRKM---VQMNIMPNVFVYAILLDGYFRTGQH-------- 462
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +K+M + G+E + + ++ S + +A + + YL + F+Y
Sbjct: 463 EAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYL-DVFNYSS 521
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE-MIEK 354
L+ G +G A + EM K +YN+L L G+ E K+++ MIE
Sbjct: 522 LMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEP--KSVFSRMIEL 579
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
D +TY +V++ +G+ A+ LL E+++
Sbjct: 580 GLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKS 613
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 97/230 (42%), Gaps = 16/230 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G +K +EM + ++ P+ C T Y ++ + + A V + M+ L
Sbjct: 353 KAGKSKEAEEMFQTILKLNLVPN-CVT---YTALLDGHCKVGDVEFAETVLQKMEKEHVL 408
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P++ +++ + + +G +N +E +R +MV I P++F ++ GY
Sbjct: 409 ---PNVVTFSSIINGYAKKG---MLNKA-VEVLR----KMVQMNIMPNVFVYAILLDGYF 457
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ A + +M + N+ +D L++ L G K A+ L ++ KG
Sbjct: 458 RTGQHEAAAGFYKEMKS-WGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDV 516
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
+Y+SL+ G + + EM EK D + Y + + R G+
Sbjct: 517 FNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGK 566
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ +YNIL + G ++I+ L+ +M+ G P + N +I+ Y +
Sbjct: 793 PNATTYNILVSGHGRVGNKR-------DSIK-LYCEMITKGFIPTTGTYNVLIQDYAKAG 844
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG------------RTKNARELCDEM 316
+ A + ++M + +PNS +YD LI G C A++L EM
Sbjct: 845 KMRQARELLNEM-LTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREM 903
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
KG VPS + + S + G+ ++ + L +I R
Sbjct: 904 CEKGHVPSESTLMYISSNFSAPGKRDDAKRLLKTVIGLYR 943
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLF------KQMVNDGIE----------PDIFSLNSM 260
LFT SRG VY ET L M N +E P +F N +
Sbjct: 41 LFTLLASRGV------VYGETTYKLVVDGLCGAGMANQALELVRELSGVYTPTLFIYNGI 94
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
I G ++ V DA ++ +M V + +PN F+Y L++GLC +TK ARE+ EMKR G
Sbjct: 95 ITGLCRASRVMDAYKVLEKM-VEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNG 153
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+ +Y +L+ L+ GE++E ++ + E + P D IT T++ +C+ R +A+
Sbjct: 154 CKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDAL 213
Query: 381 KLLKELQN----------KNLIDGYTYTKLLD 402
K ++E++ NL+ G+ LD
Sbjct: 214 KFMEEMRQMGVRPNEVTYSNLVHGFRQHGELD 245
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 130/270 (48%), Gaps = 22/270 (8%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
+TY ++ L A M + ++V ++ + + T +YN II A SR + +K
Sbjct: 55 TTYKLVVDGLCGAGMANQALELVREL--SGVYTPTLFIYNGIITGLCRA---SRVMDAYK 109
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
++ P++ +Y IL L R T + R +F++M +G +P+ +
Sbjct: 110 VLEKMVEESIVPNVFTYTILLNG-LCRSNKTKLA-------REVFQEMKRNGCKPNPITY 161
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEM 316
++I+ + +++ALR+ + + LP + + ++ GLC R +A + +EM
Sbjct: 162 GTLIQHLSRAGEIDEALRVMIEQRSL--ELPTDVITCTTIVGGLCKASRLDDALKFMEEM 219
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR---PVDFITYRTVLDEICRR 373
++ G P+ +Y++LV +GE++ ++ E EK R ++ Y LD +C+
Sbjct: 220 RQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEE--EKARKGGSLEAAAYPGYLDALCKA 277
Query: 374 GRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
G A K ++EL+ ++ D TY+ L++
Sbjct: 278 GYLDRARKSVEELRQSGVVPDVVTYSMLIN 307
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 115/244 (47%), Gaps = 27/244 (11%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K +EM QM P+ E Y+ +++ F + +L R + F+ K +
Sbjct: 212 ALKFMEEM----RQMGVRPN----EVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLE 263
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ +Y A G Y++ R +++ G+ PD+ + + +I + +
Sbjct: 264 AA--AYPGYLDALCKAG--------YLDRARKSVEELRQSGVVPDVVTYSMLINTFARAG 313
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ +L + M GV P+ +Y LI+ LC + + ++A L + M+ G P+
Sbjct: 314 QFDASLELLEDMRRNGVK----PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNV 369
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMKLLK 384
+YNS++ L +G+++E V ++EM+ K R D +TY +++ + + G A+KL +
Sbjct: 370 VTYNSVMDGLCKSGKMDE-VHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFE 428
Query: 385 ELQN 388
+++
Sbjct: 429 LIKS 432
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSF-CGTEALY-NTIIYFFAEARKLSRAVYVF 196
TY + + L A E+D+ + M+ S T+ + TI+ +A +L A
Sbjct: 160 TYGTLIQHLSRAG---EIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDA---L 213
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
K+M+ R + RP+ +Y+ L F G+ + + E K +E +
Sbjct: 214 KFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEE-----KARKGGSLEAAAYP 268
Query: 257 --LNSMIK-GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
L+++ K GY+ + ++ Q GVV P+ +Y LI+ G+ + EL
Sbjct: 269 GYLDALCKAGYL--DRARKSVEELRQSGVV----PDVVTYSMLINTFARAGQFDASLELL 322
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
++M+R G P +Y++L++ L + ++ + L M P + +TY +V+D +C+
Sbjct: 323 EDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKS 382
Query: 374 GRAGEAMKLLK-ELQNKNLIDGYTYTKLLDVL 404
G+ E ++ + L+++ D TY+ +++ L
Sbjct: 383 GKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGL 414
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + +Y++L F G+ + L + M +G++PD+ + +++I
Sbjct: 297 PDVVTYSMLINTFARAGQ--------FDASLELLEDMRRNGVKPDVVTYSTLINVLCKER 348
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
DA R+ M + PN +Y+ ++ GLC G+ + + M + P +Y
Sbjct: 349 KFQDAFRLLELMEAAGSP-PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTY 407
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRP-VDFITYRTVLDEICRRGRAGEA 379
+ +++ L+ G ++ VK L+E+I+ R D Y V+ +CR G+ EA
Sbjct: 408 SIIMNGLSKAGMLDSAVK-LFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 122/260 (46%), Gaps = 21/260 (8%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY--FFAEARKLSRAVYVFKYMKNSR 203
K G ++ Q + D + + PS L N I E +L A++
Sbjct: 148 KEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASG------ 201
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G
Sbjct: 202 ---AQPDVYTYSVLINGLCKESK--------MDEAHELFDEMLEKGLVPNGVTFTTLIDG 250
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ + ++ A+ I+ Q+ + P+ +Y+ LI+G C +G K R+L DEM KG P
Sbjct: 251 HCKNGKLDLAMEIYKQI-LSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKP 309
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+Y +L+ G++E + +MIE+ +D + Y ++ +C+ GR+ +A K+L
Sbjct: 310 DKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKML 369
Query: 384 KELQNKNL-IDGYTYTKLLD 402
+E+ + L D TYT +++
Sbjct: 370 REMLSVGLKPDSGTYTIVMN 389
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF--------------------HQMGVVY-------- 284
DI+ + +I Y+ S + DAL F H M + Y
Sbjct: 65 DIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFY 124
Query: 285 ------NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C +G + A+ + D + + G PS S+N+L++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKM 184
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G ++E + M D TY +++ +C+ + EA +L E+ K L+ +G T+
Sbjct: 185 GILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTF 244
Query: 398 TKLLD 402
T L+D
Sbjct: 245 TTLID 249
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 85/232 (36%), Gaps = 50/232 (21%)
Query: 127 ASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA 186
+ QP D TY ++ L E ++ ++ML + T+I +
Sbjct: 200 SGAQP----DVYTYSVLINGLCKESKMDEAHELFDEMLE-KGLVPNGVTFTTLIDGHCKN 254
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
KL A+ ++K + S+ L P + +YN L F +G ++ R L +M
Sbjct: 255 GKLDLAMEIYKQIL-SQGLS--PDLITYNTLIYGFCKKGD--------LKQTRDLIDEMS 303
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNYL----------- 287
G++PD + ++I G + A +M VVY L
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSV 363
Query: 288 ---------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
P+S +Y +++ C G +L EM+R G VPS
Sbjct: 364 DAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPS 415
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 45/318 (14%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQ-EDPLVCLELFNWASKQPRFRHDASTYHIMTRK 146
++ + VS + P ++ V++LQ D +C+ F W K + D + + + +
Sbjct: 57 NSSLKSLVSHMNPNVASQ----VISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKL 112
Query: 147 LGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
+ ++ +Y+ V+ ++ S C E L ++Y F E R+ V+ F+ N
Sbjct: 113 IVSSGLYRVAHAVIVALIKECSRCEKEML--KLMYCFDELRE----VFGFRL-----NYP 161
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMET---------IRCLFKQMVNDGI--EPDIF 255
C S+ ++ A L G Y+ + ME R + + +G ++F
Sbjct: 162 CYSSL----LMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMF 217
Query: 256 SLNSMIKGYILSNHVN--------------DALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+ G++L +H+ DAL++F M PNS SY LIHGLC
Sbjct: 218 MSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLC 277
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
GR + A L D+M KG PS+++Y L+ AL G +++ EMI + +
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 362 TYRTVLDEICRRGRAGEA 379
TY ++D +CR G+ EA
Sbjct: 338 TYTVLIDGLCRDGKIEEA 355
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I+ E +L A F C+PS R+Y +L A RG I+ +
Sbjct: 269 YSILIHGLCEVGRLEEA---FGLKDQMGEKGCQPSTRTYTVLIKALCDRG---LIDKAFN 322
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +M+ G +P++ + +I G + +A + +M V P+ +Y+
Sbjct: 323 -----LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM-VKDRIFPSVITYNA 376
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C GR A EL M+++ P+ +++N L+ L G+ + V L M++
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ++Y ++D +CR G A KLL + ++ D T+T +++
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 132/319 (41%), Gaps = 47/319 (14%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L++F+ SK+ ++ +Y I+ L +E + +QM T Y +I
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT-YTVLI 308
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ + +A +F M C+P++ +Y +L GK N V
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRG---CKPNVHTYTVLIDGLCRDGKIEEANGVC------ 359
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---------------LRIFHQM----- 280
++MV D I P + + N++I GY V A +R F+++
Sbjct: 360 --RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 281 --GVVYNYL------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
G Y + P+ SY+ LI GLC +G A +L M P
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++ ++++A G+ + L M+ K +D +T T++D +C+ G+ +A+ +L+ L
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 387 -QNKNLIDGYTYTKLLDVL 404
+ + L ++ +LD+L
Sbjct: 538 VKMRILTTPHSLNVILDML 556
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+ P + + +++ G I S + + RI M + LPN + Y +I+GLC GR +
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL-SGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A +L M+ G P+ +Y +V NG+++ ++ + M+E+ ++ Y ++L
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 88/249 (35%), Gaps = 45/249 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I ++ A +K + + + P ++ + AF +GK
Sbjct: 444 YNVLIDGLCREGHMNTA---YKLLSSMNCFDIEPDCLTFTAIINAFCKQGK--------A 492
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF------------HQMGVV 283
+ M+ GI D + ++I G DAL I H + V+
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 284 YNYL----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+ L P+ +Y L+ GL G + + + MK G
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P+ Y +++ L G VEE K L M + + +TY ++ G+ A++
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 382 LLKELQNKN 390
++ + +
Sbjct: 673 TVRAMVERG 681
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 114/228 (50%), Gaps = 14/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ ++A L+ A F M + P++ +YNIL A RG +
Sbjct: 159 YNAVLLALSDA-SLTSARRFFDSMLSD---GVAPNVYTYNILVRALCGRG--------HR 206
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + M G P++ + N+++ + + V+ A R+ M PN +++
Sbjct: 207 KEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM-REGGLKPNLVTFNS 265
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+++G+C G+ ++AR++ DEM R+G P SYN+LV G E + EM +K
Sbjct: 266 MVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKG 325
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D +T+ +++ +C+ G A+ L+++++ + L ++ T+T L+D
Sbjct: 326 IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALID 373
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+++ R C P++ +YN L AF G+ ++ L M G++P++ + N
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGE--------VDGAERLVGMMREGGLKPNLVTFN 264
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
SM+ G + + DA ++F +M V P+ SY+ L+ G C G + A + EM +
Sbjct: 265 SMVNGMCKAGKMEDARKVFDEM-VREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 323
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG +P ++ SL+ + G +E V + +M E+ ++ +T+ ++D C++G +
Sbjct: 324 KGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDD 383
Query: 379 AMKLLKELQN----------KNLIDGYTYTKLLD 402
A+ ++ ++ LI+GY +D
Sbjct: 384 ALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMD 417
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 12/224 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E + +I F + L A+ + MK R +PS+ YN L + G+
Sbjct: 365 EVTFTALIDGFCKKGFLDDALLAVRGMKQCR---IKPSVVCYNALINGYCMVGR------ 415
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
M+ R L +M G++PD+ + +++I Y + + A + QM + LP++ +
Sbjct: 416 --MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQM-LEKGVLPDAIT 472
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI LC + R +A L M + G P +Y SL+ G VE + +M+
Sbjct: 473 YSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMV 532
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
+ D +TY +++ + + RA EA +LL +L +++ I T
Sbjct: 533 KAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANT 576
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 130/327 (39%), Gaps = 68/327 (20%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
TY+I+ R L +E ++ M + CG + YNT++ F A ++ A +
Sbjct: 192 TYNILVRALCGRGHRKEALSILRDMRG--AGCGPNVVTYNTLVAAFFRAGEVDGAERLVG 249
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR------------------ 239
M+ +P++ ++N + GK V+ E +R
Sbjct: 250 MMREG---GLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYC 306
Query: 240 ---------CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYL 287
+F +M GI PD+ + S+I + ++ A+ + QM G+ N +
Sbjct: 307 KAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEV 366
Query: 288 -------------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEM 316
P+ Y+ LI+G C GR AREL EM
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
+ KG P +Y++++SA N + + +M+EK D ITY +++ +C R
Sbjct: 427 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRL 486
Query: 377 GEAMKLLKELQNKNL-IDGYTYTKLLD 402
+A L K + L D +TYT L+D
Sbjct: 487 SDAHVLFKNMIKLGLQPDEFTYTSLID 513
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 109/271 (40%), Gaps = 26/271 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + R L K + + M+ E Y ++I + + A+ +
Sbjct: 469 DAITYSSLIRVLCGEKRLSDAHVLFKNMIKL-GLQPDEFTYTSLIDGHCKEGNVESALSL 527
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI----- 250
M + L P + +Y++L LS+ ME + LFK D I
Sbjct: 528 HDKMVKAGVL---PDVVTYSVLING-LSKSARA------MEAQQLLFKLYHEDPIPANTK 577
Query: 251 ---------EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+ ++ S+ +++KG+ + +N+A +++ M + N+ + Y LIHG C
Sbjct: 578 YDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSM-LDRNWNLDGSVYSVLIHGHC 636
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G A +M + GF P+S S SL+ L NG V E + + +++ D
Sbjct: 637 RAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAE 696
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ ++D G + +L + L+
Sbjct: 697 ASKALIDLNLNEGNVDAVLDVLHGMAKDGLL 727
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 112/230 (48%), Gaps = 12/230 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y+ +I+ +ARK+ A+ + MK + C P +YN+L G
Sbjct: 161 EVVYSALIHGLCKARKMDCALEMLAQMKKAF---CTPDTITYNVLIDGLCKSGD------ 211
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+E R F +M+ G +PD+++ N +I G+ + + + A Q + + +
Sbjct: 212 --VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHT 269
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y ++ L + + A L +++ G P+ +YN+L++ L G +EE + L +++
Sbjct: 270 YTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 329
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ D +TY +++D + + R+ EA KL KE+ + L +D YT L+
Sbjct: 330 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALI 379
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 116/272 (42%), Gaps = 21/272 (7%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
+TY+ + L +E D++ +++ TP Y ++I + ++ A
Sbjct: 22 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV----VTYTSLIDGLGKEKRSFEAYK 77
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+FK M R L Y L L GK + VY K M + G PD+
Sbjct: 78 LFKEMA-LRGLAL--DTVCYTALIRELLQTGKIPQASSVY--------KTMTSHGCVPDV 126
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+L++MI G + + A+RIF M PN Y LIHGLC + A E+
Sbjct: 127 VTLSTMIDGLSKAGRIGAAVRIFKSM-EARGLAPNEVVYSALIHGLCKARKMDCALEMLA 185
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+MK+ P + +YN L+ L +G+VE EM+E D TY ++ C+ G
Sbjct: 186 QMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 245
Query: 375 RAGEAMKLLKELQNKN--LIDGYTYTKLLDVL 404
A L + N ID +TYT ++D L
Sbjct: 246 NTDAASHSLAQETTINGCTIDIHTYTAIVDWL 277
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 107/254 (42%), Gaps = 19/254 (7%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
+TY+ + L +E D++ +++ TP Y ++I + ++ A
Sbjct: 303 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV----VTYTSLIDGLGKEKRSFEAYK 358
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+FK M R L Y L L GK + VY K M + G PD+
Sbjct: 359 LFKEMA-LRGLAL--DTVCYTALIRELLQTGKIPQASSVY--------KTMTSHGCVPDV 407
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+L++MI G + + A+RIF M PN Y LIHGLC + A E+
Sbjct: 408 VTLSTMIDGLSKAGRIGAAVRIFKSM-EARGLAPNEVVYSALIHGLCKARKMDCALEMLA 466
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+MK+ P + +YN L+ L +G+VE EM+E D TY ++ C+ G
Sbjct: 467 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 526
Query: 375 RAGEAMKLLKELQN 388
A + ++ +
Sbjct: 527 NTDAACGVFDDMSS 540
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 21/242 (8%)
Query: 136 DASTYHIMTRKLGAAK----MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D TY + LG K Y+ ++ + LA + C Y +I + K+ +
Sbjct: 336 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVC-----YTALIRELLQTGKIPQ 390
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A V+K M + C P + + + + G+ +R +FK M G+
Sbjct: 391 ASSVYKTMTSHG---CVPDVVTLSTMIDGLSKAGR-------IGAAVR-IFKSMEARGLA 439
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P+ +++I G + ++ AL + QM + P++ +Y+ LI GLC G + AR
Sbjct: 440 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAF-CTPDTITYNILIDGLCKSGDVEAARA 498
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
DEM G P +YN L+S G + +M + + +TY ++ +C
Sbjct: 499 FFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLC 558
Query: 372 RR 373
+R
Sbjct: 559 KR 560
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P+I +YN L G+ +E L +++V++G PD+ + S+I G
Sbjct: 17 CTPTIATYNALLNGLCKMGR--------LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 68
Query: 267 SNHVNDALRIFHQMG--------VVYNYL--------------------------PNSFS 292
+A ++F +M V Y L P+ +
Sbjct: 69 EKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVT 128
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+I GL GR A + M+ +G P+ Y++L+ L +++ ++ L +M
Sbjct: 129 LSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 188
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLL 401
+ D ITY ++D +C+ G A E L+ D YTY L+
Sbjct: 189 KAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILI 238
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ + A L +++ G P+ +YN+L++ L G +EE + L ++++ D +TY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+++D + + R+ EA KL KE+ + L +D YT L+
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALI 98
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P +Y+ L++GLC GR + A +L ++ G P +Y SL+ L E K
Sbjct: 19 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 78
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
EM + +D + Y ++ E+ + G+ +A + K + + + D T + ++D L
Sbjct: 79 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 138
Query: 407 D--FGNSIR 413
G ++R
Sbjct: 139 AGRIGAAVR 147
>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
Length = 630
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 123/243 (50%), Gaps = 23/243 (9%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+ QEM Q LA F +++ +I F ++ ++ RA+ V++ M +R +
Sbjct: 320 AWKVAQEMG---GQGLAPSEF-----VFSAVITGFCKSGEVDRALMVWETMVAAR---VK 368
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ Y+ + F G+ T LF++MV+ P+I + +SM++GY
Sbjct: 369 PNVVLYSAMIDGFARSGRMTEAEK--------LFEEMVDAKCIPNIVTYSSMVRGYFHIA 420
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ + AL + +M + +P + SY LI GLC GR K+A + M +G P + +Y
Sbjct: 421 NSSRALSTWEEM-IKVGCVPTAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAY 479
Query: 329 NSLVSALALNGEVEETVKNLWEMIEK--QRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
S++ L ++G V+ ++ +M+ K +P D I+Y +LD + R AM LL ++
Sbjct: 480 TSMMKGLCMSGMVDGGLRLFNDMLAKGDAKP-DVISYNVLLDALIRTNDLPRAMDLLNQM 538
Query: 387 QNK 389
++
Sbjct: 539 LDQ 541
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T++ A+A + AV + M ++ S ++N + A L G +N
Sbjct: 200 YSTVVSALADAGCVEEAVALVHEMV----VDGVVSAEAFNPVLKAMLRAGD---VNGAVK 252
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
LF+ M G + N ++ G +L A+ I +M G+V P +
Sbjct: 253 -----LFRFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIV----PGLMT 303
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE-M 351
Y ++ GL GR ++A ++ EM +G PS ++++++ +GEV+ + +WE M
Sbjct: 304 YGAVVDGLVKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALM-VWETM 362
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+ + + + Y ++D R GR EA KL +E+ + I TY+ ++
Sbjct: 363 VAARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMV 413
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PS ++ + T F G+ ++ M +++ MV ++P++ ++MI G+ S
Sbjct: 334 PSEFVFSAVITGFCKSGE---VDRALM-----VWETMVAARVKPNVVLYSAMIDGFARSG 385
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ +A ++F +M V +PN +Y ++ G + A +EM + G VP++ SY
Sbjct: 386 RMTEAEKLFEEM-VDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGCVPTAISY 444
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ L+S L G +++ + MI + D I Y +++ +C G ++L ++
Sbjct: 445 SILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDMLA 504
Query: 389 KN--LIDGYTYTKLLDVL 404
K D +Y LLD L
Sbjct: 505 KGDAKPDVISYNVLLDAL 522
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVND--------ALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
G+ P + S N ++K I S+ V AL I H + +N +P+ F+Y ++ L
Sbjct: 149 GLTPTLLSFNLLLK-CICSSMVPRNPGLYLAVALGILHDVIPAWNLVPDKFTYSTVVSAL 207
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
G + A L EM G V S++++N ++ A+ G+V VK M K +
Sbjct: 208 ADAGCVEEAVALVHEMVVDGVV-SAEAFNPVLKAMLRAGDVNGAVKLFRFMQLKGCTLTA 266
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
+TY +L + G A AM +++ ++N+ ++ G TY ++D L
Sbjct: 267 VTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPGLMTYGAVVDGL 311
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
R A K+++EM D P+ Y++++ + SRA+ ++ M
Sbjct: 386 RMTEAEKLFEEMVDAK----CIPNI----VTYSSMVRGYFHIANSSRALSTWEEMIK--- 434
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+ C P+ SY+IL + G+ ++ ++K M+ G PD + SM+KG
Sbjct: 435 VGCVPTAISYSILISGLCDVGR--------LKDAMMVWKNMIGRGCAPDTIAYTSMMKGL 486
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+S V+ LR+F+ M + P+ SY+ L+ L A +L ++M + P
Sbjct: 487 CMSGMVDGGLRLFNDMLAKGDAKPDVISYNVLLDALIRTNDLPRAMDLLNQMLDQMCDPD 546
Query: 325 SKSYNSLVSALA-LNGEVEETVKNL 348
+ + N + L G+ E ++ L
Sbjct: 547 TITCNIFLREFGVLEGKGREFLEGL 571
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLAS--- 206
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 207 GVQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLIPNGVTFTTLIXGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ M + + LP+ +Y+ LI+GLC +G K A L DEM KG P
Sbjct: 259 KNGRVDLAMEIYKXM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ K+ MI+ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 318 FTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLKPDIGTYTMIIN 395
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF-----HQMGVVYN---------------------- 285
DI+ + +I Y+ S + DA+ + H++ V ++
Sbjct: 71 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFY 130
Query: 286 -------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M+ D TY +++ +C+ + +A +L E+ K LI +G T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 250
Query: 398 TKLL 401
T L+
Sbjct: 251 TTLI 254
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 124/268 (46%), Gaps = 16/268 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
RF D TY+ + K DV+ M+ + T+ YN I+ F A +L
Sbjct: 194 RFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVES-GIAPTKTTYNIILKGFFRAGQLRH 252
Query: 192 AVYVFKYMK--NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A F MK S++ C+P + SY + G+ +E R +F +M +G
Sbjct: 253 AWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQ--------LEKARKVFDEMAKEG 304
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
P + + N++I+ +V DA+ +F M +V Y+PN +Y LI GLC G+
Sbjct: 305 CAPSVATYNALIQVICKKGNVEDAVTVFDGM-LVKGYVPNVVTYTVLIRGLCHAGKIDRG 363
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVL 367
+L + MK G P ++YN L+ L GE+E+ + +L+E + K + TY ++
Sbjct: 364 LKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGL-DLFEKMSKGEECLPNQDTYNIII 422
Query: 368 DEICRRGRAGEAMKLLKELQNKNLIDGY 395
+ R RA E M L + ++ + GY
Sbjct: 423 SAMFMRKRA-EDMVLAARMVDEMVDRGY 449
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 20/220 (9%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR--PSIRSYNILFTAFLSRGKNTYINH 232
L+N+++ +++R +A + R LE R P + +YN L + R K+T
Sbjct: 167 LFNSLLDALSKSRHAGKAASLV------RALEQRFTPDVVTYNTLADGW-CRVKDT---S 216
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY----LP 288
++ +R MV GI P + N ++KG+ + + A F QM + P
Sbjct: 217 RALDVLRL----MVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKP 272
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ SY ++HGL G+ + AR++ DEM ++G PS +YN+L+ + G VE+ V
Sbjct: 273 DVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVF 332
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
M+ K + +TY ++ +C G+ +KLL+ ++N
Sbjct: 333 DGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKN 372
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 16/239 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L++ SK + D +Y M LG A ++ V ++M A + A YN +I
Sbjct: 258 LQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEM-AKEGCAPSVATYNALI 316
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ + AV VF M + P++ +Y +L GK ++
Sbjct: 317 QVICKKGNVEDAVTVFDGMLVKGYV---PNVVTYTVLIRGLCHAGK--------IDRGLK 365
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L ++M N G EP + + N +I+ + L +F +M LPN +Y+ +I +
Sbjct: 366 LLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAM 425
Query: 301 CAQGRTKN---ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ R ++ A + DEM +G++P +N +++ L L G +E + L M EK R
Sbjct: 426 FMRKRAEDMVLAARMVDEMVDRGYLPRRFMFNRVLNGLMLTGN-QELSRKLLRMQEKYR 483
>gi|218188821|gb|EEC71248.1| hypothetical protein OsI_03217 [Oryza sativa Indica Group]
Length = 571
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 128/293 (43%), Gaps = 21/293 (7%)
Query: 96 SELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE 155
EL P F + L + PL L LF A H A +Y + L A
Sbjct: 99 GELEPPFLS--LLRAYSRAHQPLAALHLFRSAPSALGLPHSARSYTAVLAALVAHSHLSL 156
Query: 156 MDDVVNQMLATPSFCGTEALYNTII--YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M A F T A YN ++ + A + AV VF RN+ +P S
Sbjct: 157 ARSLLADMRAA-GFAPTTATYNVLVKAHCSDAAVPIDDAVRVF------RNIP-KPDACS 208
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN + RG+ + R LF +M+ +G P + + ++I +DA
Sbjct: 209 YNTVIDGLCRRGR--------LPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDA 260
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
L++F +M +PN +Y LI GLC GR +A EL D M ++ +P++ +Y+S++
Sbjct: 261 LKLFDEMAR-RGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVID 319
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L G + + ++ L M + R D + ++ +C GRA EA L E+
Sbjct: 320 GLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEM 372
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 55/279 (19%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
PS E + +++ ++ A + A+++F+ ++ L S RSY + A ++
Sbjct: 96 PSPGELEPPFLSLLRAYSRAHQPLAALHLFRSAPSALGLPH--SARSYTAVLAALVA--- 150
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI--LSNHVNDALRIFHQMGVVY 284
H ++ R L M G P + N ++K + + ++DA+R+F +
Sbjct: 151 -----HSHLSLARSLLADMRAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNIPK-- 203
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNAREL---------------------------C---- 313
P++ SY+ +I GLC +GR AR+L C
Sbjct: 204 ---PDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDA 260
Query: 314 ----DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
DEM R+G +P+ +Y+SL+ L G V+ L M+++++ + ITY +V+D
Sbjct: 261 LKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDG 320
Query: 370 ICRRGRAGEAMKLLK--ELQNKNLIDGYTYTKLLDVLED 406
+C+ G G+AM++L LQ + D + KL+ L D
Sbjct: 321 LCKEGCLGQAMEILDRMRLQGRK-PDAGLFGKLIVGLCD 358
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 121/273 (44%), Gaps = 30/273 (10%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
TY I+ L A +++ VV++M A + G LY +I + A + RA VF
Sbjct: 203 GTYTILVDSLSTAGDISKVEAVVDEMKAK-NVAGDVYLYTAVINAYCRAGNVRRASEVFD 261
Query: 198 YMKNSRNLEC-----RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
EC P+ R+Y +L F G+ ME L M G+
Sbjct: 262 --------ECVGNGIEPNERTYGVLINGFCKIGQ--------MEAAEMLLADMQGRGVGH 305
Query: 253 DIFSLNSMIKGYILSNHVNDALRI---FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ N+MI GY V++AL++ +MG+ + ++Y+ L GLC R A
Sbjct: 306 NQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDV----YTYNTLACGLCRVNRMAEA 361
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+ L M KG P+ +Y +L+S G++ E + EM K +TY ++D
Sbjct: 362 KTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDG 421
Query: 370 ICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
++G EA + KE++ K L+ D YTY L+
Sbjct: 422 YIKKGSIREAERFRKEMEKKGLVPDVYTYASLV 454
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 5/133 (3%)
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR--EL 312
+ + ++ G+ S V+DA + +M + N+ Y+ L+ C R +AR EL
Sbjct: 133 LAASVVVDGFCKSGRVDDARALLDEM-PRHGVRLNALCYNSLLD--CYVRRKDDARVQEL 189
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+ M+ G + +Y LV +L+ G++ + + EM K D Y V++ CR
Sbjct: 190 LEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCR 249
Query: 373 RGRAGEAMKLLKE 385
G A ++ E
Sbjct: 250 AGNVRRASEVFDE 262
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ ++ L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRNLVPCFDHELVYNVLHGAKNAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M ++ +I + +A + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDXDMWVLMIDSYGKAGIVQESVKLFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YDALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK K P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K
Sbjct: 229 GYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDK 284
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML + T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKML-SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVITYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP++ + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
Y PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ G
Sbjct: 247 K-GYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISSQCKAG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDII 358
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y + V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDXDMWVLMIDSYGKAGIVQESVKLFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SYD L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKL 400
E + +M ++ D ITY T+++ R + EA K E++ KN+ + TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 123/260 (47%), Gaps = 21/260 (8%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF--FAEARKLSRAVYVFKYMKNSR 203
K G ++ Q + D + + PS L N I E +L A++
Sbjct: 148 KEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASG------ 201
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
+P + +Y++L K N LF +M+ +G+ P+ + ++I G
Sbjct: 202 ---VQPDVYTYSVLINGLCKESKMNDANE--------LFGEMIGNGLVPNGVTFTTLIDG 250
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ + ++ A+ + +M + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 251 HCKTGSIDLAMETYKEM-LRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKP 309
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+Y +L+ G++E + MI++ +D + Y ++ +CR G++ +A K+L
Sbjct: 310 DKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKML 369
Query: 384 KELQNKNL-IDGYTYTKLLD 402
+E+ + L D TYT +++
Sbjct: 370 REMLSVGLKPDNGTYTMIIN 389
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF--------------------HQMGVVY-------- 284
D++ + +I Y+ S ++DAL F H M + Y
Sbjct: 65 DVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFY 124
Query: 285 ------NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C +G + A+ + DE+ + G PS S+N+L++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRL 184
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M D TY +++ +C+ + +A +L E+ L+ +G T+
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTF 244
Query: 398 TKLLD 402
T L+D
Sbjct: 245 TTLID 249
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 132/285 (46%), Gaps = 18/285 (6%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
LCN E+ L+ L +P R A+ R+ A + + + ++ + LA
Sbjct: 86 LCNA-ERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLA- 143
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
P A+ N + + ++S A+ V + MK C+P++ +YN L F + GK
Sbjct: 144 PCVVTCTAVINA----YCKEGRMSDALRVLELMKLRG---CKPNVWTYNALVQGFCNEGK 196
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
+ L +M G+ PD + N +I+G + H+ A R+ M
Sbjct: 197 --------VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG-DGL 247
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ + ++Y+ LI+ LC GRT A L D ++ +G P++ ++NSL++ L +G+ + K
Sbjct: 248 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWK 307
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
L +M+ D TY + ++ +C+ + E + + E+ K++
Sbjct: 308 FLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 352
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
MV G PD ++ NS+I GY +N V+ A +F +M + + + SY LI GLC G
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP-LRGFAQDVVSYATLIEGLCEAG 59
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R A EL EM + P Y +LV L EE + L M E Y
Sbjct: 60 RIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYA 115
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL 391
V+D CR +A EA ++L+E+ K L
Sbjct: 116 AVVDFRCRERKAKEAEEMLQEMFEKGL 142
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 10/191 (5%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN L A G+ + LF + GI+P+ + NS+I G S +
Sbjct: 253 TYNALINALCKDGRT--------DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 304
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A + +M V P++++Y I LC ++ EM +K PS+ +Y ++
Sbjct: 305 AWKFLEKM-VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 363
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNL 391
L + EM+ D +TY T + C GR EA +L E+ +N
Sbjct: 364 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 423
Query: 392 IDGYTYTKLLD 402
+D Y L+D
Sbjct: 424 VDTMAYNTLMD 434
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 100/227 (44%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + + +A +F ++ +R + +P+ ++N L GK I ++
Sbjct: 254 YNALINALCKDGRTDQACSLFDSLE-TRGI--KPNAVTFNSLINGLCKSGKAD-IAWKFL 309
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +MV+ G PD ++ +S I+ + L +M + + P++ +Y
Sbjct: 310 E-------KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEM-LQKDVKPSTVNYTI 361
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+IH L + EM G P +Y + + A + G + E L EM +
Sbjct: 362 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 421
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN-KNLIDGYTYTKLL 401
VD + Y T++D G+ A+ +LK++ + ++ + +TY LL
Sbjct: 422 VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 468
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 68/361 (18%), Positives = 117/361 (32%), Gaps = 105/361 (29%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY L K QE + +ML PS Y +I+ + R
Sbjct: 320 DTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN----YTIVIHKLLKERNYGLV 375
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ M +S C P + +Y A+ G+ +V ME M +G+
Sbjct: 376 ARTWGEMVSSG---CNPDVVTYTTSMRAYCIEGRLNEAENVLME--------MSKNGVTV 424
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN--------------------------- 285
D + N+++ G+ + A+ I QM V +
Sbjct: 425 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 484
Query: 286 ------------------------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMK---- 317
+LPNS +Y ++ G GRT+ A L MK
Sbjct: 485 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 544
Query: 318 -------------------------------RKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ GF+P SY L+S L G+ ++ +
Sbjct: 545 SLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKE 604
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVLE 405
K D I ++ ++D + ++G + + +++ L+ N + TY L + L
Sbjct: 605 IFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELP 664
Query: 406 D 406
D
Sbjct: 665 D 665
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +NIL F G + R +F ++ G+ P + S N++I GY S
Sbjct: 224 PNVYLFNILMHGFCKIGD--------VMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+V + + + P+ F+Y LI+GLC + R + A L DEM G VP+ ++
Sbjct: 276 NVEEGF-VLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTF 334
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ +G+++ ++N M ++ D ITY +++ +CR G EA KLL E+
Sbjct: 335 TTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIG 394
Query: 389 KNL-IDGYTYTKLLD 402
D T+T L+D
Sbjct: 395 NGFKPDKITFTTLMD 409
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 46/263 (17%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
L+N +++ F + + A VF + + R L RPS+ S+N L + + R KN
Sbjct: 228 LFNILMHGFCKIGDVMNARMVFDEI-SRRGL--RPSVVSFNTLISGY-CRSKN------- 276
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNY 286
+E L M ++ I PD+F+ +++I G + V +A +F +M GV +
Sbjct: 277 VEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTT 336
Query: 287 L--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
L P+ +Y+ LI+GLC G K AR+L +EM G
Sbjct: 337 LIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNG 396
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
F P ++ +L+ +G+++ ++ M+E+ +D + + ++ +CR GR +A
Sbjct: 397 FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAE 456
Query: 381 KLLKE-LQNKNLIDGYTYTKLLD 402
++LK+ L + D TYT ++D
Sbjct: 457 RMLKDMLSAGHKPDDPTYTMVID 479
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 117/272 (43%), Gaps = 14/272 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
R D TY + L +E + + ++M + T+I + K+
Sbjct: 291 RISPDVFTYSALINGLCKESRVEEANGLFDEMCEM-GLVPNGVTFTTLIDGQCKHGKIDL 349
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ F+ MK+ R + RP + +YN L G ++ R L +M+ +G +
Sbjct: 350 ALRNFEIMKD-RGI--RPDLITYNALINGLCRDGD--------LKEARKLLNEMIGNGFK 398
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD + +++ G ++ AL I +M V + ++ LI GLC GR ++A
Sbjct: 399 PDKITFTTLMDGCCKDGDMDSALEIKDRM-VEEGIELDDVAFTALISGLCRDGRVRDAER 457
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ +M G P +Y ++ G+V+ K L EM R +TY +++ C
Sbjct: 458 MLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFC 517
Query: 372 RRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
++G+ A LL + N ++ + T+ LLD
Sbjct: 518 KQGQMKNAKMLLHAMLNMEVVPNDITFNILLD 549
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 37/302 (12%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
L N+ L PL FN+ + +P FRH Y M L + + +
Sbjct: 69 LINLNPLSLPPLSLFSFFNYLASRPPFRHTLHNYSTMAHFLSSHNLLSQ----------- 117
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN---ILFTAFLS 223
T +L+ II S+ + S ++ P+ +N ++F A +
Sbjct: 118 -----THSLFLFII---------SKMGHHSSTSLISSLIQTVPTHHRHNHSVLVFDALII 163
Query: 224 RGKNTYINHVYME-TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV 282
Y + ++E I+CL + + + + + +++ + N F+ +
Sbjct: 164 ----AYTDSEFIEDAIQCL-RLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVL 218
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
Y Y PN + ++ L+HG C G NAR + DE+ R+G PS S+N+L+S + VE
Sbjct: 219 DYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVE 278
Query: 343 ETVKNLWEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKL 400
E L ++E +R D TY +++ +C+ R EA L E+ L+ +G T+T L
Sbjct: 279 EGFV-LKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTL 337
Query: 401 LD 402
+D
Sbjct: 338 ID 339
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 136/295 (46%), Gaps = 24/295 (8%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-- 174
P FNW ++ F H+ TY IM LG K ++ N + + E
Sbjct: 98 PTKAFLFFNWIHEKG-FSHNPQTYFIMLEILGREK---NLNIARNFLYSIEKRSNGEVKL 153
Query: 175 ---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
+N++I + EA +V +F+ MK + P + ++N + L RG+
Sbjct: 154 EDRFFNSLIRSYGEAGLFKESVKLFENMK---LIGVSPGVVTFNSVLLVLLKRGRTNMAK 210
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
VY E ++ G++PD ++ N +I+G+ ++ V++ F +M ++ P+
Sbjct: 211 EVYDEMLKTY-------GVKPDTYTYNILIRGFCKNSMVDEGFYFFKEM-TSFDCDPDVV 262
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKR--KGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+Y+ L+ GLC G+ K A L + M + K P +Y +L+ EV+E + L
Sbjct: 263 TYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILE 322
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK--NLIDGYTYTKLLD 402
EM + + +TY T++ +C + + ++L++++ ++ D T+ L++
Sbjct: 323 EMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLIN 377
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 44/289 (15%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G M +E V ++ML T YN +I F + + Y FK M +
Sbjct: 202 KRGRTNMAKE---VYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTS---F 255
Query: 206 ECRPSIRSYNILFTAFLSRGK----NTYINHV-------------YMETIR--C------ 240
+C P + +YN L GK + +N + Y IR C
Sbjct: 256 DCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVD 315
Query: 241 ----LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ ++M G++P+I + N++IKG + + I QM +P++ +++ L
Sbjct: 316 EALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTL 375
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ- 355
I+ C G A ++ + MK+ S SY+ L+ L G+ + E+ EK+
Sbjct: 376 INSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEI 435
Query: 356 -------RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTY 397
+P+ +Y+ + +C G+ +A ++L++L + D +Y
Sbjct: 436 LLSSYGPKPLA-ASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSY 483
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 122/296 (41%), Gaps = 17/296 (5%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
++ L LE N +P + TY+ + + L A+ + +M +++ QM
Sbjct: 315 DEALDILEEMNGRGLKP----NIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDAC 370
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+NT+I A L A FK +N + LE SY++L +G ++
Sbjct: 371 TFNTLINSHCCAGNLDEA---FKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLF 427
Query: 235 METIRCLFKQMV---NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
E LF++ + + G +P S M + + A R+ Q+ + +
Sbjct: 428 DE----LFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQL--MKRGTQDPL 481
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
SY +I G C +G +N L M R+ F+P Y+ L+ + + L +M
Sbjct: 482 SYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKM 541
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTY-TKLLDVLED 406
++ T+ ++L+ + +G E+ ++ + +N+ + TK L +L D
Sbjct: 542 LKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFD 597
>gi|255660934|gb|ACU25636.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 484
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHGSKKSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E L+ +I + +A + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF L RG+ YM R F +M+++GIEP + N MI G+ L V A
Sbjct: 118 YDALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLCGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-XREISPDVITYNTMINGYYRVKKIEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
V++ + L EM + ITY T+L +C + EA +LKE+ +K
Sbjct: 229 GYVSVDRVDDALTLLEEMKGFGIKPNAITYSTLLPGLCNAEKMSEASGILKEMVDK 284
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 108/277 (38%), Gaps = 57/277 (20%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F K+ A F+ MK E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLCGKVETANRFFEDMKXR---EISPDVITYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y +E F +M IEP + + ++IKGY+ + V+DAL + +M
Sbjct: 193 ------NGYYRVKKIEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALTLLEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLC------------------------------------AQG 304
+ PN+ +Y L+ GLC G
Sbjct: 247 KG-FGIKPNAITYSTLLPGLCNAEKMSEASGILKEMVDKYIAPKDNSIFLRLISGQCKAG 305
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ---RP---- 357
A ++ M R + Y L+ G+ E+ +K L ++IEK RP
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGDYEKAIKLLDKLIEKDIVLRPQSSL 365
Query: 358 -VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
++ Y +++ +C G+ +A L+++L + D
Sbjct: 366 HMEPSAYNPLVEYLCNNGQTAKAETLVRQLMKLGVQD 402
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 23/240 (9%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
PSF E +YN + ++K A+ F++++ S E R ++ L G
Sbjct: 7 VPSF-DHELVYNVL----HGSKKSEHALQFFRWVERSNLFEHN---RETHLKIIEIL--G 56
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
+ + +NH RC+ M G+E D MI Y + V +++++F +M GV
Sbjct: 57 RASKLNHA-----RCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGV 111
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
SYD L + +GR A+ ++M +G P+ ++N ++ L G+VE
Sbjct: 112 ERTIK----SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLCGKVE 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+ +M ++ D ITY T+++ R + EA K E++ +N+ TYT L+
Sbjct: 168 TANRFFEDMKXREISPDVITYNTMINGYYRVKKIEEAEKYFVEMKGRNIEPTVVTYTTLI 227
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 146/371 (39%), Gaps = 87/371 (23%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-- 171
+E +V L F WA P+FR+ Y + T L + +VV M+ + G
Sbjct: 131 EEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAEIGKL 190
Query: 172 -----------------TEALYNTIIYFFAEARKL-----------SRAVY--------- 194
T + N II AE R + +R VY
Sbjct: 191 KEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYI 250
Query: 195 VFKYMKNSRNLE-----CRPSIRSY-------NILFTAFLSRG----------------- 225
+ Y +N LE C R + ++ TAF +
Sbjct: 251 IVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGL 310
Query: 226 KNTYINHVYMETIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
IN+ M + C L ++MV +G +P++++ S+I G A R
Sbjct: 311 SPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFR 370
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+F ++ NY PN +Y +I G C + + A L + MK +G VP++ +Y +L+
Sbjct: 371 LFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGH 430
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFI----TYRTVLDEICRRGRAGEAMKLLKE-LQNKN 390
G + +E++E F TY +++D +C+RGRA EA KLL QN+
Sbjct: 431 CKAGNFSKA----YELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQI 486
Query: 391 LIDGYTYTKLL 401
DG TYT L+
Sbjct: 487 EADGVTYTILI 497
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E D + +M+ F A II F E ++RAV+ F + + P++ +Y
Sbjct: 262 EADRWICEMMER-GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK---MGLSPNLINY 317
Query: 215 NILFTAFLSRG-------------KNTYINHVYMET---------------IRCLFKQMV 246
+ + + RG KN + +VY T R K +
Sbjct: 318 SSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIR 377
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQ 303
+D +P++ + +MI GY ++ A +F +M G+V PN+ +Y LI G C
Sbjct: 378 SDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLV----PNTNTYTTLIDGHCKA 433
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G A EL + M +GF P++ +YNS+V L G EE K L + Q D +TY
Sbjct: 434 GNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTY 493
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++ E C+R +A+ L ++ D + YT L+
Sbjct: 494 TILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLI 532
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 45/250 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I + + KLSRA +F+ MK + P+ +Y L G + Y
Sbjct: 388 YTAMISGYCKEEKLSRAEMLFERMKEQGLV---PNTNTYTTLIDGHCKAGN---FSKAYE 441
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNYL 287
L + M N+G P+ + NS++ G +A ++ + GV Y L
Sbjct: 442 -----LMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTIL 496
Query: 288 --------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
P+ Y LI C Q K++ +L DE+ + G
Sbjct: 497 ISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGL 556
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P+ ++Y S++ +V VK +M + D I+Y ++ +C+ R EA +
Sbjct: 557 APTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQ 616
Query: 382 LLKELQNKNL 391
L + +K L
Sbjct: 617 LYDTMIDKGL 626
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 90/228 (39%), Gaps = 12/228 (5%)
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
++++ F YN+I+ K RA FK + + +Y IL +
Sbjct: 444 ELMSNEGFFPNTCTYNSIVDGLC---KRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 500
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
R M +M G +PDI ++I + N + D+ ++F ++
Sbjct: 501 CKRAD--------MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV- 551
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
+ P +Y +I G C + + A + +M G P S SY +L+S L +
Sbjct: 552 IKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRL 611
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+E + MI+K +T T+ E C+ AM +L+ L K
Sbjct: 612 DEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKK 659
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + KL +A +M+ S +P+I +YN + + S G+ +
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSG---VKPNIVTYNTIVHGYCSSGR--------V 272
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + M IEPD F+ S+I G + +A +IF +M V P++ Y+
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM-VQKGLRPSAVIYNT 331
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G A DEM +KG P+ +YNSL+ AL + +E + E+ EK
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D ITY +++ CR A +A L E+ + TYT LL VL
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL 441
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 125/259 (48%), Gaps = 32/259 (12%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---------- 221
T + YN++I+ ++ A + K ++ P +YNIL +
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQEKG---ISPDAITYNILINGYCRCANAKKAF 416
Query: 222 ------LSRG----KNTYIN--HVY-----METIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
L+ G K TY + HV M+ LFK++ ++G+ PD N++I G+
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGH 476
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+++V A + M + P+ +++ ++ G C +G+ + AREL DEMKR+G P
Sbjct: 477 CSNSNVKGAFELLKDMDRM-KVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
S+N+L+S + G++++ + EM++ +TY ++ +C+ A +LLK
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLK 595
Query: 385 ELQNKNLI-DGYTYTKLLD 402
E+ +K + D TY L++
Sbjct: 596 EMVSKGMTPDDTTYFTLIE 614
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N+++ F + + A ++ M L + S+ ++NI+ GK ++
Sbjct: 190 NSLLSLFLKLNRTEAAWVLYAEM---FRLRIKSSVYTFNIMINVLCKEGK--------LK 238
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ M G++P+I + N+++ GY S V A I M P+SF+Y L
Sbjct: 239 KAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKR-QKIEPDSFTYGSL 297
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I G+C QGR + A ++ +EM +KG PS+ YN+L+ G ++ EM++K
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
TY +++ + R EA ++KE+Q K + D TY L++
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILIN 404
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 126/326 (38%), Gaps = 33/326 (10%)
Query: 96 SELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQ--------------PRFRHDASTYH 141
S L P ++ L N L E P V L+ N + R H
Sbjct: 62 SSLTPSLISQTLLN---LHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALH 118
Query: 142 IMTRKLGAAKMYQEMDDVVNQMLATPSFCG--TEALYNTIIYFFAEARKLSRAVYVFKYM 199
++ + LG + ++ + A+ G + +++ +I + + A F M
Sbjct: 119 LLRQALGGGTT-NSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTM 177
Query: 200 KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNS 259
K L P+I + N L + FL + E L+ +M I+ +++ N
Sbjct: 178 KEKGVL---PTIETCNSLLSLFLKLNRT--------EAAWVLYAEMFRLRIKSSVYTFNI 226
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
MI + A M PN +Y+ ++HG C+ GR + A + MKR+
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMET-SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ 285
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
P S +Y SL+S + G +EE K EM++K + Y T++D C +G A
Sbjct: 286 KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345
Query: 380 MKLLKELQNKNLIDGY-TYTKLLDVL 404
E+ K + TY L+ L
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHAL 371
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 13/285 (4%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI 179
LE+FNW + FR D T +M R LG + + L + Y ++
Sbjct: 65 ALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKS-LREEGYPLDVYAYTSL 123
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
I + RK A+ F+ MK + +PS+ +YN++ + +G++ E I
Sbjct: 124 ISALSRNRKFKEALGFFEQMKEAGP---QPSLVTYNVIIDLYGKKGRS-------WENIL 173
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
LF++M GI+PD ++ N+ I + +A +F QM N P+ +Y+ L+
Sbjct: 174 ELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSS-NCTPDRVTYNALLDV 232
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
G A + EM+ G +P+ +YN L+SA G + M+ K D
Sbjct: 233 YGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPD 292
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
TY ++L R G+ +AM++ +++ N + +T+ L+ +
Sbjct: 293 VFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGM 337
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 129/302 (42%), Gaps = 51/302 (16%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTI 179
LELF Q + D TY+ + + +E ++ QM + S C + + YN +
Sbjct: 173 LELFEEMKAQG-IQPDEYTYNTAITACASGSLCEEATELFTQMKS--SNCTPDRVTYNAL 229
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ + +A + A V K M+++ C P+I +YN L +AF G+ N
Sbjct: 230 LDVYGKAGWYNEAANVLKEMESAG---CLPNIVTYNELLSAF---GRAGLCNAAAE---- 279
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI-- 297
+ MV+ GIEPD+F+ S++ Y + V A+ I++QM N PNSF+++ LI
Sbjct: 280 -MKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTS-NCTPNSFTFNALIGM 337
Query: 298 HG------------------------------LCAQGRTKNARELCD---EMKRKGFVPS 324
HG L A G+ E+ MK+ GF P
Sbjct: 338 HGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPD 397
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
++N L+ A G ++ + M++ D T+ T+L + R GR A +L
Sbjct: 398 KATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILD 457
Query: 385 EL 386
EL
Sbjct: 458 EL 459
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 17/252 (6%)
Query: 157 DDVVNQMLAT--PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
D+ V+ +L T P+ +E L +I+ + ++A+ VF +M+ S N RP +
Sbjct: 30 DECVSSVLTTSEPNLSSSELL--SIMKGLGREGQWNKALEVFNWMRQSVNF--RPDGVTI 85
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
++ G+ + + T+ LFK + +G D+++ S+I + +AL
Sbjct: 86 AVMLRIL---GRESQLT-----TVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEAL 137
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT-KNARELCDEMKRKGFVPSSKSYNSLVS 333
F QM P+ +Y+ +I +GR+ +N EL +EMK +G P +YN+ ++
Sbjct: 138 GFFEQMKEA-GPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAIT 196
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LI 392
A A EE + +M D +TY +LD + G EA +LKE+++ L
Sbjct: 197 ACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLP 256
Query: 393 DGYTYTKLLDVL 404
+ TY +LL
Sbjct: 257 NIVTYNELLSAF 268
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 138/320 (43%), Gaps = 51/320 (15%)
Query: 97 ELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEM 156
EL F LCN +D +V + +P D TY + A ++
Sbjct: 263 ELLSAFGRAGLCNAAAEMKDSMVSKGI------EP----DVFTYTSLLSAYSRAGKVEQA 312
Query: 157 DDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
++ NQM S C + +N +I + + S + +F+ M+ P I ++N
Sbjct: 313 MEIYNQMRT--SNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACG---VEPDIVTWN 367
Query: 216 ILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
L AF GKN +Y E ++ +F+ M G EPD + N +I+ Y + AL
Sbjct: 368 SLLGAF---GKN----GMYSEVLK-VFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALS 419
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
I+ M + P+ +++ L+ L +GR ++A + DE+ R + P+ +Y S++ A
Sbjct: 420 IYDGM-LQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAY 478
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY 395
A GE+E+ L EM++ + ++ + +L K + Y
Sbjct: 479 ANGGELEK----LKEMVDTLHTI-YVPFTKIL--------------------LKTFVLVY 513
Query: 396 TYTKLLDVLEDDFGNSIRHH 415
+ L+D ED F ++RHH
Sbjct: 514 SKCSLVDEAEDAF-LAMRHH 532
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 111/272 (40%), Gaps = 17/272 (6%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
+ L+ N +S +P AS H G + +EM D ++ + T+ L T
Sbjct: 454 LILDELNRSSYKPNDIAYASMLHAYANG-GELEKLKEMVDTLHTIYVP----FTKILLKT 508
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
+ +++ + A F M++ L ++N + + + +G M+
Sbjct: 509 FVLVYSKCSLVDEAEDAFLAMRHHGYLS---DTSTFNAMISMYGKKG--------MMDKA 557
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
F + + G+EPD+ + N ++ Y + + P+ SY+ +I
Sbjct: 558 TDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLREC-MAAGQTPDLVSYNTVIF 616
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G+ +A + EM G P S +YN+ V G E + + M +
Sbjct: 617 SYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKP 676
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
D +TYRT++D C+ G+ E ++LK +++ +
Sbjct: 677 DEVTYRTLVDAYCKIGKFEEVERILKFIKSSD 708
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 57/333 (17%), Positives = 115/333 (34%), Gaps = 58/333 (17%)
Query: 104 NEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM 163
N+ +M + ED C +P D T++ + G MY E+ V M
Sbjct: 341 NKNFSEMMVIFEDMQAC-------GVEP----DIVTWNSLLGAFGKNGMYSEVLKVFRGM 389
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
F +A +N +I + +A+ ++ M + C P + ++N L A
Sbjct: 390 -KKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAG---CTPDLATFNTLLAALAR 445
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
G+ + + E R +K P+ + SM+ Y + + + +
Sbjct: 446 EGRWEHAELILDELNRSSYK--------PNDIAYASMLHAYANGGELEKLKEMVDTLHTI 497
Query: 284 Y----------------------------------NYLPNSFSYDYLIHGLCAQGRTKNA 309
Y YL ++ +++ +I +G A
Sbjct: 498 YVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKA 557
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+ ++ G P +YN L+ G + L E + + D ++Y TV+
Sbjct: 558 TDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFS 617
Query: 370 ICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ G+ A ++ E+ + + D +TY +
Sbjct: 618 YSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFV 650
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 118/246 (47%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 150 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLAS--- 202
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 203 GVQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLVPNGVTFTTLIDGHC 254
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ +M + + LP+ +Y+ LI+GLC +G K A L DEM KG P
Sbjct: 255 KNGRVDLAMEIYKRM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDK 313
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 314 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLRE 373
Query: 386 LQNKNL 391
+ + L
Sbjct: 374 MLSVGL 379
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF--------------------HQMGVVY-------- 284
DIF + +I Y+ S + DA+ + H M + Y
Sbjct: 67 DIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 126
Query: 285 ------NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++
Sbjct: 127 KXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 186
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M+ D TY +++ +C+ + +A +L E+ K L+ +G T+
Sbjct: 187 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 246
Query: 398 TKLLD 402
T L+D
Sbjct: 247 TTLID 251
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 126/260 (48%), Gaps = 18/260 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +TY+ + D+ QM+++ C NT++ + KL A+ +
Sbjct: 423 DTTTYNTLIHGFCLVGDLNAALDLSQQMISS-GVCPDIVTCNTLLDGLCDNGKLKDALEM 481
Query: 196 FKYMKNSR-NLEC-------RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
FK M+ S+ +L+ P +++YNIL + ++ GK ++E L+K+M +
Sbjct: 482 FKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGK-------FLEAEE-LYKEMPH 533
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI P+ + +SMI G + +++A ++F MG ++ P+ +++ L+ G C GR
Sbjct: 534 RGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGS-KSFSPDVVTFNTLVSGYCKAGRVD 592
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+ EL EM R+G V + +Y +L+ G + + EMI D IT R++L
Sbjct: 593 DGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSML 652
Query: 368 DEICRRGRAGEAMKLLKELQ 387
+ + A+ +L++LQ
Sbjct: 653 TVLWSKEELKRAVAMLEDLQ 672
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + + S A + + M + P++ +Y+ L A++ K +
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERK---INPNVVTYSALINAYVKERK-------FF 336
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+ +M+ GI P+ + NSMI G+ N ++ A +F+ M P+ F+++
Sbjct: 337 EAEE-LYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMAT-KGCSPDVFTFNT 394
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C R + EL EM G V + +YN+L+ L G++ + +MI
Sbjct: 395 LIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D +T T+LD +C G+ +A+++ K +Q +
Sbjct: 455 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 490
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 39/250 (15%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET----- 237
F E + L A+ +F M SR L PS+ +N L + + + +Y +
Sbjct: 52 FHEIKGLEDAIDLFSDMVRSRPL---PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQI 108
Query: 238 ----------IRCL------------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
I+C F ++ G +PD+ + ++++ G + + V++AL
Sbjct: 109 PCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALD 168
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+FHQM PN ++ L++GLC +GR A L D M G P+ +Y ++V +
Sbjct: 169 LFHQM-----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223
Query: 336 ALNGEVEETVKNLWEMIEKQ--RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI- 392
G+ + L +M E +P + + Y ++D + + GR +A L E+Q K +
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKP-NVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFP 282
Query: 393 DGYTYTKLLD 402
D +TY ++D
Sbjct: 283 DLFTYNCMID 292
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 23/280 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D T++ + AK + +++++M T T YNT+I+ F L+ A+ +
Sbjct: 388 DVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTT-YNTLIHGFCLVGDLNAALDL 446
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN-------D 248
+ M +S P I + N L GK +E + + K ++ +
Sbjct: 447 SQQMISSGVC---PDIVTCNTLLDGLCDNGKL----KDALEMFKAMQKSKMDLDASRPFN 499
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGR 305
G+EPD+ + N +I G I +A ++ +M G+V PN+ +Y +I+GLC Q R
Sbjct: 500 GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIV----PNTITYSSMINGLCKQSR 555
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A ++ D M K F P ++N+LVS G V++ ++ EM + D ITY T
Sbjct: 556 LDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYIT 615
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
++ + G A+ + +E+ + + D T +L VL
Sbjct: 616 LIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVL 655
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 16/228 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
++T+++ ++S A+ +F M CRP++ ++ L G+ +
Sbjct: 150 FSTLLHGLCVEDRVSEALDLFHQM-------CRPNVVTFTTLMNGLCREGR-------VV 195
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +MV DG++P+ + +++ G AL + +M + + PN Y
Sbjct: 196 EAV-ALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSA 254
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GL GR +A L EM+ KG P +YN ++ +G E + L EM+E++
Sbjct: 255 IIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERK 314
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ +TY +++ + + EA +L E+ + +I + TY ++D
Sbjct: 315 INPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMID 362
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 12/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y TI+ + A+ + + M+ ++ +P++ Y+ + G+++ +++Y
Sbjct: 216 YGTIVDGMCKIGDTVSALNLLRKMEEMSHI--KPNVVIYSAIIDGLWKDGRHSDAHNLYT 273
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E M GI PD+F+ N MI G+ S ++A R+ +M + PN +Y
Sbjct: 274 E--------MQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM-LERKINPNVVTYSA 324
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+ + + A EL DEM +G +P++ +YNS++ ++ + M K
Sbjct: 325 LINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKG 384
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D T+ T++D C R + +LL E+ L+ D TY L+
Sbjct: 385 CSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLI 431
>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
gi|223975267|gb|ACN31821.1| unknown [Zea mays]
Length = 469
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 13/238 (5%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
+QM++ E+ YN +I FA+A ++ RA+ K M+ S P++ ++N L
Sbjct: 209 SQMVSDGLLSSVES-YNIVIDCFAKAGEVERALETIKVMQESGF---SPNLVTFNTLING 264
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
+L G + + K ++ G+ PD+ + S+I G ++ ++DA F +M
Sbjct: 265 YLKLGN--------VHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTHQLDDAFNCFSEM 316
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
+ PN +Y+ LIHGLC+ G A EL ++MK G P + S+N+ + + +
Sbjct: 317 SE-WGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFNAPILSFCRMRK 375
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYT 398
+E+ K +M D TY ++ +C R EA +++ +++ + I +T
Sbjct: 376 IEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHT 433
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 1/152 (0%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M DG PD F+ N+++ G V++ALR+ QM PN +Y L+ G C
Sbjct: 1 MPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERA-GIRPNVVTYTMLVDGFCNAS 59
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R + A + + MK KG + +Y SLV E E + L E IE + I Y
Sbjct: 60 RVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYH 119
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
T+L + + EA++L K++ + + G T
Sbjct: 120 TLLYCLSKNDMDKEAVELAKKMSKRGYLLGST 151
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 11/144 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I+ A +S+A+ + MK P S+N +F K +
Sbjct: 328 YNVLIHGLCSAGHVSKAIELLNKMKMDG---ITPDAYSFNAPILSFCRMRK--------I 376
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + LF M G+ PD ++ N++IK V++A I M + +Y
Sbjct: 377 EKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESISCIGTKQHTYWP 436
Query: 296 LIHGLCAQGRTKNARELCDEMKRK 319
++ L GR A +++ RK
Sbjct: 437 VVGALTKMGRFSEAGMFMNKLHRK 460
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 131/291 (45%), Gaps = 29/291 (9%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT---PSFCGTEALYNTIIYFFAE 185
KQ D TY + L ++ + + +M+ P+ C +N++I +
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVC----TFNSVIDGLCK 295
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
K+ A + +YM P + +YN++ + RG+ ++ R +F M
Sbjct: 296 EGKVEDAEEIMRYMIEKG---VDPDVITYNMIIDGYGLRGQ--------VDRAREIFDSM 344
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
+N IEPDI S N +I GY +++A+++ ++ P+ + + L+HGL GR
Sbjct: 345 INKSIEPDIISYNILINGYARQKKIDEAMQVCREISQ-KGLKPSIVTCNVLLHGLFELGR 403
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
TK+A+ DEM G +P ++ +L+ NG VEE + + ++ ++ + Y
Sbjct: 404 TKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTA 463
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVLED 406
V+D +C+ G+ +A ++L L I GY LLD +D
Sbjct: 464 VIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKD 514
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y T++ + +A + + M+ +P+ R+Y I+ AF G
Sbjct: 178 EVMYGTVMNGLCKKGHTQKAFDLLRLMEQGST---KPNTRTYTIVIDAFCKDG------- 227
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
++ L +M I PDIF+ +++I + + +F +M + N PN +
Sbjct: 228 -MLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEM-IHLNIYPNVCT 285
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
++ +I GLC +G+ ++A E+ M KG P +YN ++ L G+V+ + MI
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMI 345
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
K D I+Y +++ R+ + EAM++ +E+ K L
Sbjct: 346 NKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGL 384
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 1/157 (0%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
GI + + ++I+G N V DA+ +F ++ PN Y +++GLC +G T+
Sbjct: 137 GIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQK 196
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L M++ P++++Y ++ A +G ++ L EM +K P D TY T++D
Sbjct: 197 AFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
+C+ + L E+ + N+ T+ ++D L
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 98/243 (40%), Gaps = 45/243 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I +A +K+ A+ V + + +PSI + N+L G+
Sbjct: 356 YNILINGYARQKKIDEAMQVCREISQKG---LKPSIVTCNVLLHGLFELGRT-------- 404
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------------- 280
++ + F +M++ G PD+++ +++ GY + V +A+ FH++
Sbjct: 405 KSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAV 464
Query: 281 --GVVYN-----------------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
G+ N P+ +Y +I G C +G A+++ +M+ G
Sbjct: 465 IDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+ +++YN +V + +V E L E+ K + T ++D I M
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSITRKMH 584
Query: 382 LLK 384
+K
Sbjct: 585 WIK 587
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 36/200 (18%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ------------MGVVYNY-- 286
LF+QMV P + S + ++K + H + + +F + + +V N
Sbjct: 59 LFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNSCC 118
Query: 287 -------------------LP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV-PSS 325
+P N ++ LI GL A+ + K+A L ++ R+ P+
Sbjct: 119 LMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNE 178
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
Y ++++ L G ++ L M + + TY V+D C+ G A LL E
Sbjct: 179 VMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNE 238
Query: 386 LQNKNL-IDGYTYTKLLDVL 404
++ K++ D +TY+ L+D L
Sbjct: 239 MKQKSIPPDIFTYSTLIDAL 258
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 147/371 (39%), Gaps = 79/371 (21%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
++ +E +V L F WA P+FR+ Y + T L + +VV M+ +
Sbjct: 714 LLASEEGSMVALSFFYWAVGFPKFRYFMRLYIVCTMSLVGKCNLERAHEVVECMVGVFAE 773
Query: 170 CG-------------------TEALYNTIIYFFAEARKL-----------SRAVY----- 194
G T + N II AE R + +R VY
Sbjct: 774 IGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCT 833
Query: 195 ----VFKYMKNSRNLE-----CRPSIRSY-------NILFTAFLSRG------------- 225
+ Y +N LE C R + ++ TAF +
Sbjct: 834 YKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVT 893
Query: 226 ----KNTYINHVYMETIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
IN+ M + C L ++MV +G +P++++ S+I G
Sbjct: 894 KMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTE 953
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
A R+F ++ NY PN +Y +I G C + + A L + MK +G VP++ +Y +L
Sbjct: 954 RAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTL 1013
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKN 390
+ G + + + M + + TY +++D +C+RGRA EA KLL QN+
Sbjct: 1014 IDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQI 1073
Query: 391 LIDGYTYTKLL 401
DG TYT L+
Sbjct: 1074 EADGVTYTILI 1084
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 39/263 (14%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E D + +M+ F A II F E ++RAV+ F + + P++ +Y
Sbjct: 849 EADRWICEMMER-GFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK---MGLSPNLINY 904
Query: 215 NILFTAFLSRG-------------KNTYINHVYMET---------------IRCLFKQMV 246
+ + + RG KN + +VY T R K +
Sbjct: 905 SSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIR 964
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQ 303
+D +P++ + +MI GY ++ A +F +M G+V PN+ +Y LI G C
Sbjct: 965 SDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLV----PNTNTYTTLIDGHCKA 1020
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G A EL + M +GF P++ +YNS+V L G EE K L + Q D +TY
Sbjct: 1021 GNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTY 1080
Query: 364 RTVLDEICRRGRAGEAMKLLKEL 386
++ E C+R +A+ L ++
Sbjct: 1081 TILISEQCKRADMNQALVFLNKM 1103
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 45/250 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I + + KLSRA +F+ MK + P+ +Y L G + Y
Sbjct: 975 YTAMISGYCKEEKLSRAEMLFERMKEQGLV---PNTNTYTTLIDGHCKAGN---FSKAYE 1028
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNYL 287
L + M N+G P+ + NS++ G +A ++ + GV Y L
Sbjct: 1029 -----LMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTIL 1083
Query: 288 --------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
P+ Y LI C Q K++ +L DE+ + G
Sbjct: 1084 ISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGL 1143
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P+ ++Y S++ +V VK +M + D I+Y ++ +C+ R EA +
Sbjct: 1144 APTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQ 1203
Query: 382 LLKELQNKNL 391
L + +K L
Sbjct: 1204 LYDTMIDKGL 1213
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 90/228 (39%), Gaps = 12/228 (5%)
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
++++ F YN+I+ K RA FK + + +Y IL +
Sbjct: 1031 ELMSNEGFFPNTCTYNSIVDGLC---KRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 1087
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
R M +M G +PDI ++I + N + D+ ++F ++
Sbjct: 1088 CKRAD--------MNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV- 1138
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
+ P +Y +I G C + + A + +M G P S SY +L+S L +
Sbjct: 1139 IKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRL 1198
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+E + MI+K +T T+ E C+ AM +L+ L K
Sbjct: 1199 DEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKK 1246
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 115/227 (50%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + +L A+ K++ N C+P++ ++NI+ + S G+ +M
Sbjct: 282 YNVLINGICKEGRLDEAI---KFLNNMPLYGCQPNVITHNIILRSMCSTGR-------WM 331
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R L M+ G P + + N +I + A+ + +M + +PNS SY+
Sbjct: 332 DAER-LLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK-HGCMPNSLSYNP 389
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+HG C + + A E + M +G P +YN+L++AL +G+ + V+ L ++ K
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG 449
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
ITY TV+D + + G+ A +LL+E++ K L D TY+ LL
Sbjct: 450 CSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLL 496
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 20/272 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
T++I+ R + + + + + ++ ML +PS +N +I F R L RA+ V
Sbjct: 316 THNIILRSMCSTGRWMDAERLLADMLRKGCSPSV----VTFNILINFLCRKRLLGRAIDV 371
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M C P+ SYN L F K M+ + MV+ G PDI
Sbjct: 372 LEKMPKH---GCMPNSLSYNPLLHGFCQEKK--------MDRAIEYLEIMVSRGCYPDIV 420
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N+++ + A+ I +Q+ P +Y+ +I GL G+T+ A EL +E
Sbjct: 421 TYNTLLTALCKDGKADAAVEILNQLSS-KGCSPVLITYNTVIDGLTKVGKTEYAAELLEE 479
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+RKG P +Y++L+ L G+V+E +K +M +TY ++ +C+ +
Sbjct: 480 MRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQ 539
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
A+ L + K TYT L++ + D
Sbjct: 540 TSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + + L F GK + ME + N G PD+ + N +I GY S
Sbjct: 140 PDVIACTSLIRGFCRSGKTRKATRI-MEILE-------NSGAVPDVITYNVLIGGYCKSG 191
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ AL++ +M V P+ +Y+ ++ LC G+ K A E+ D ++ P +Y
Sbjct: 192 EIDKALQVLERMSVA----PDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITY 247
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L+ A + V + +K L EM +K D +TY +++ IC+ GR EA+K L +
Sbjct: 248 TILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM 305
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN--YLPNSFSYDYLIH 298
++M+ G PD+ + S+I+G+ S A RI M ++ N +P+ +Y+ LI
Sbjct: 129 FLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRI---MEILENSGAVPDVITYNVLIG 185
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G C G A ++ ++R P +YN+++ +L +G+++E ++ L ++++
Sbjct: 186 GYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYP 242
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY +++ C G+AMKLL E++ K D TY L++
Sbjct: 243 DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
F+ N ++ + + + + L+ +M + +P+ + LI G C G+T+ A + +
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERM-IYQGDIPDVIACTSLIRGFCRSGKTRKATRIME 166
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
++ G VP +YN L+ +GE+++ ++ L M D +TY T+L +C G
Sbjct: 167 ILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSG 223
Query: 375 RAGEAMKLL-KELQNKNLIDGYTYTKLLDVLEDDFG 409
+ EAM++L +++Q + D TYT L++ +D G
Sbjct: 224 KLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSG 259
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + ++ ++ +A+ V + M + P + +YN + + GK
Sbjct: 180 YNVLIGGYCKSGEIDKALQVLERMSVA------PDVVTYNTILRSLCDSGK-------LK 226
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +QM + PD+ + +I+ + V A+++ +M P+ +Y+
Sbjct: 227 EAMEVLDRQMQRE-CYPDVITYTILIEATCNDSGVGQAMKLLDEMRK-KGCKPDVVTYNV 284
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G+C +GR A + + M G P+ ++N ++ ++ G + + L +M+ K
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+T+ +++ +CR+ G A+ +L+++
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKM 375
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 14/270 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y+I+ L K + + ++M+ T +N++I F +L A +
Sbjct: 198 DVVMYNIIINSLCKDKAVSDAYQLYSEMI-TKRISPDVVTFNSLILGFCVVGQLKEAFGL 256
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M +N+ P + +++IL A G T + + M+ G+ PD+
Sbjct: 257 FHEMV-LKNIN--PDVYTFSILVDALCKDGNIT--------RAKNMLAVMMKQGVIPDVV 305
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +S++ GY L N VN A +F M + P++ SY+ +I+GL A L E
Sbjct: 306 TYSSLMDGYCLVNEVNKAKHVFSTMSRL-GVAPHAHSYNIMINGLGKIKMVDEALSLFKE 364
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M KG P + +YNSL+ L G + + + EM P D +TY +++D +C+
Sbjct: 365 MCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHH 424
Query: 376 AGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+A+ L+K+++++ + YTY L+D L
Sbjct: 425 IDKAIALVKKIKDQGIQPSMYTYNILIDGL 454
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 14/216 (6%)
Query: 202 SRNLECR---PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
S LE + P+I ++NIL + G+ T+ + F +++ G P + N
Sbjct: 82 SHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSI--------FAKILKLGYHPTTITFN 133
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I G L+ + +AL FH + + + SY LI+GLC G T+ A ++ +++
Sbjct: 134 TLINGICLNGKLKEALH-FHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEG 192
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
K YN ++++L + V + + EMI K+ D +T+ +++ C G+ E
Sbjct: 193 KLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKE 252
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLDVLEDDFGNSIR 413
A L E+ KN+ D YT++ L+D L D GN R
Sbjct: 253 AFGLFHEMVLKNINPDVYTFSILVDALCKD-GNITR 287
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 24/223 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR---PSIRSYNILFTAFLSRGKNTYINH 232
YN +I + + + A+ +FK M C+ P +YN L G+ +Y
Sbjct: 342 YNIMINGLGKIKMVDEALSLFKEMC------CKGIAPDTVTYNSLIDGLCKLGRISYAWQ 395
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPN 289
L +M N+GI DI + NS+I ++H++ A+ + ++ G+ P+
Sbjct: 396 --------LVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQ----PS 443
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
++Y+ LI GLC GR KNA+++ ++ KG+ ++ +YN +++ L G E L
Sbjct: 444 MYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLS 503
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+M D +TY T++ + R+ +A KLL+E+ + L+
Sbjct: 504 KMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 8/194 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PSI +N + + + N Y T L Q+ GI P I + N ++ Y
Sbjct: 55 PSIVEFNKILGSIVKANNNHY------TTAISLSHQLELKGITPTIVTFNILVNCYCHLG 108
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A IF ++ + Y P + +++ LI+G+C G+ K A D + GF SY
Sbjct: 109 EMTFAFSIFAKI-LKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSY 167
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L++ L GE ++ L ++ K D + Y +++ +C+ +A +L E+
Sbjct: 168 RTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMIT 227
Query: 389 KNL-IDGYTYTKLL 401
K + D T+ L+
Sbjct: 228 KRISPDVVTFNSLI 241
>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
Length = 693
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 14/285 (4%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
E F WA +Q R+RH +M A K+ M V ++ ++ N +
Sbjct: 114 FEFFRWADRQWRYRHAPEFAQLMLSYSRAGKLRSAMR--VLHLMQKDGCAPDISICNMAV 171
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
A ++ +A ++ + R + P + +YN L G ++ + M +
Sbjct: 172 NVLVVAGRVDKA---LEFAERMRRVGVEPDVYTYNCLIKGLC--GARRVVDAMEMIGV-- 224
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
M+ +G PD S +++ V + + +M P+ +Y+ LIHGL
Sbjct: 225 ----MLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGL 280
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
G A E E + K F Y+++V + LNG + E + + EMI K D
Sbjct: 281 AKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDV 340
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
+TY TV+D CR G +A K++K + +N + T+T LL+ L
Sbjct: 341 VTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGL 385
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 121/267 (45%), Gaps = 17/267 (6%)
Query: 128 SKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEA 186
S+ RFR D Y + E ++V +M++ C + + Y+T++ F
Sbjct: 296 SEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKG--CQPDVVTYSTVVDGFCRI 353
Query: 187 RKLSRAVYVFKYM-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
+L +A + K+M KN +C+P+ ++ L GK + L +
Sbjct: 354 GELDQARKMMKHMYKN----DCKPNTVTHTALLNGLCKVGKTSEAWE--------LLNKS 401
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
+ P + + ++ G+ + ++ + QM + + P + + LIH LC G+
Sbjct: 402 EEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQM-LQKGFFPTTVEINLLIHALCKDGK 460
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A++ ++ + KG + ++ +++ + G++E + + +M R D +TY
Sbjct: 461 PAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTV 520
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLI 392
V+D + ++GR EA L++++ N+ L+
Sbjct: 521 VVDALGKKGRLKEATGLVEKMLNRGLL 547
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 107/230 (46%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + KL +A +M+ S +P+I +YN + + S G+ +
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSG---VKPNIVTYNTIVHGYCSSGR--------V 272
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + M IEPD F+ S+I G + +A +IF +M V P++ Y+
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM-VQKGLRPSAVIYNT 331
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G A DEM +KG P+ +YNSL+ AL + +E + E+ EK
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D ITY +++ CR A +A L E+ + TYT LL VL
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVL 441
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 126/259 (48%), Gaps = 32/259 (12%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---------- 221
T + YN++I+ ++ A + K ++ P +YNIL +
Sbjct: 360 TMSTYNSLIHALFMEQRTDEAECMIKEIQEKG---ISPDAITYNILINGYCRCANAKKAF 416
Query: 222 ------LSRG----KNTYIN--HVY-----METIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
L+ G K TY + HV M+ LFK++ ++G+ PD+ N++I G+
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGH 476
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+++V A + M + P+ +++ ++ G C +G+ + AREL DEMKR+G P
Sbjct: 477 CSNSNVKGAFELLKDMDRM-KVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD 535
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
S+N+L+S + G++++ + EM++ +TY ++ +C+ A +LLK
Sbjct: 536 HISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLK 595
Query: 385 ELQNKNLI-DGYTYTKLLD 402
E+ +K + D TY L++
Sbjct: 596 EMVSKGMTPDDTTYFTLIE 614
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N+++ F + + A ++ M L + S+ ++NI+ GK ++
Sbjct: 190 NSLLSLFLKLNRTEAAWVLYAEM---FRLRIKSSVYTFNIMINVLCKEGK--------LK 238
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ M G++P+I + N+++ GY S V A I M P+SF+Y L
Sbjct: 239 KAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKR-QKIEPDSFTYGSL 297
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I G+C QGR + A ++ +EM +KG PS+ YN+L+ G ++ EM++K
Sbjct: 298 ISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
TY +++ + R EA ++KE+Q K + D TY L++
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILIN 404
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 126/326 (38%), Gaps = 33/326 (10%)
Query: 96 SELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQ--------------PRFRHDASTYH 141
S L P ++ L N L E P V L+ N + R H
Sbjct: 62 SSLTPSLISQTLLN---LHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALH 118
Query: 142 IMTRKLGAAKMYQEMDDVVNQMLATPSFCG--TEALYNTIIYFFAEARKLSRAVYVFKYM 199
++ + LG + ++ + A+ G + +++ +I + + A F M
Sbjct: 119 LLKQALGGGTT-NSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTM 177
Query: 200 KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNS 259
K L P+I + N L + FL + E L+ +M I+ +++ N
Sbjct: 178 KEKGVL---PTIETCNSLLSLFLKLNRT--------EAAWVLYAEMFRLRIKSSVYTFNI 226
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
MI + A M PN +Y+ ++HG C+ GR + A + MKR+
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMET-SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ 285
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
P S +Y SL+S + G +EE K EM++K + Y T++D C +G A
Sbjct: 286 KIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA 345
Query: 380 MKLLKELQNKNLIDGY-TYTKLLDVL 404
E+ K + TY L+ L
Sbjct: 346 SAYKDEMLKKGISPTMSTYNSLIHAL 371
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 135/315 (42%), Gaps = 52/315 (16%)
Query: 126 WASKQPRFR----HDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
WA + R +A T++IMT L ++ +++M F YNT++
Sbjct: 233 WAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKM-EEEGFEPDLVTYNTLVN 291
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ + R+L A Y++K M + P++ ++ +L GK ++ L
Sbjct: 292 SYCKKRRLEDAFYLYKIMYIRGVM---PNLITHTVLMNGLCEEGK--------VKEAHQL 340
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS--------- 292
F QMV+ GI+PD+ S N+++ GY + + H+M + P+S +
Sbjct: 341 FHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEM-IGNGICPDSVTCRLIVEGFA 399
Query: 293 --------------------------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
YDYLI LC +GR AR + + G++P
Sbjct: 400 RDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQDGYMPKIN 459
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN LV +L VEE + EM+++ ++ + YR V+ +CR R EA LL+E+
Sbjct: 460 TYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEAEGLLEEM 519
Query: 387 QNKNLIDGYTYTKLL 401
+ ++ ++ L
Sbjct: 520 VSSGILPDVEISRAL 534
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 136/341 (39%), Gaps = 60/341 (17%)
Query: 100 PRFNNEELCNVMT-LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDD 158
P E+ ++ Q D L FNW Y ++ L ++++ +
Sbjct: 82 PHMGPHEISRILLRCQSDHSSVLTFFNWVKNDLNITPTLHNYCVIVHILAWSRVFSHAMN 141
Query: 159 VVNQMLATPSFCGT----------------------EALYNTIIYFFAEARKLSRAVYVF 196
++++++ G A+++ +I + +A + + + F
Sbjct: 142 LLSELIQLVEVEGVCVPPNDGIYENLVECTEDCNWNPAIFDMLIKAYVKAGMVEKGLATF 201
Query: 197 KYMKNSRNLEC--RPSIRSYNILFTAF------------------LSRGKNTYINHVYME 236
+ RN+E P++ + N L + L +N Y ++ M
Sbjct: 202 R-----RNIEACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTFNI-MT 255
Query: 237 TIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
+ C +M +G EPD+ + N+++ Y + DA ++ M +
Sbjct: 256 HVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIM-YIRGV 314
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+PN ++ L++GLC +G+ K A +L +M +G P SYN+LVS G+++
Sbjct: 315 MPNLITHTVLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRS 374
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
L EMI D +T R +++ R G+ A+ + EL+
Sbjct: 375 LLHEMIGNGICPDSVTCRLIVEGFARDGKLLSALNTVVELK 415
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 22/204 (10%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
P + +YN L N+Y +E L+K M G+ P++ + ++ G
Sbjct: 280 EPDLVTYNTLV--------NSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEE 331
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V +A ++FHQM V P+ SY+ L+ G C +G+ + R L EM G P S +
Sbjct: 332 GKVKEAHQLFHQM-VHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVT 390
Query: 328 YNSLVSALALNGEVEETVKNLWEM--IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+V A +G++ + + E+ + P D Y V +C GR A L
Sbjct: 391 CRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIV--ALCIEGRPFAARSFLLR 448
Query: 386 LQNKNLIDGY-----TYTKLLDVL 404
+ DGY TY KL++ L
Sbjct: 449 ISQ----DGYMPKINTYNKLVESL 468
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 5/162 (3%)
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
R ++ DG P I + N +++ N+V +AL + +M V + + N +Y +I
Sbjct: 443 RSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEM-VKRSMILNLVAYRAVIS 501
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
LC RT A L +EM G +P + +L++ +V++ V L + +
Sbjct: 502 CLCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVY 561
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKL 400
D +Y V+ C G E L ELQ+K L GY +L
Sbjct: 562 DTESYNAVVKVFCDVGNVAE----LLELQDKLLKVGYVSNRL 599
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 106/233 (45%), Gaps = 23/233 (9%)
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV--- 246
S + F ++KN N+ P++ +Y ++ ++ ++ E I+ + + V
Sbjct: 101 SSVLTFFNWVKNDLNI--TPTLHNYCVIVHILAWSRVFSHAMNLLSELIQLVEVEGVCVP 158
Query: 247 -NDGI-------------EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
NDGI P IF + +IK Y+ + V L F + + ++PN +
Sbjct: 159 PNDGIYENLVECTEDCNWNPAIFDM--LIKAYVKAGMVEKGLATFRR-NIEACFIPNVIA 215
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ L+ GL + +EM R G ++ ++N + L +G+ ++ + L +M
Sbjct: 216 CNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKME 275
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
E+ D +TY T+++ C++ R +A L K + + ++ T+T L++ L
Sbjct: 276 EEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGL 328
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMGVVYNYLPNSFSYDYLI 297
L ++MV+ GI PD+ ++I GY N V+ A L+ F VY+ + SY+ ++
Sbjct: 515 LLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYD----TESYNAVV 570
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
C G EL D++ + G+V + + ++ L
Sbjct: 571 KVFCDVGNVAELLELQDKLLKVGYVSNRLTCKYVIHGL 608
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 127/264 (48%), Gaps = 18/264 (6%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
+ D T+ + L D++ +M+++ C NT++ ++ KL
Sbjct: 217 KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS-GVCPNVVTCNTLLDGLCDSGKLKD 275
Query: 192 AVYVFKYMKNSR-NLEC-------RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK 243
A+ +FK M+ S +++ P +++YNIL + ++ GK ++E L++
Sbjct: 276 ALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGK-------FLEAEE-LYE 327
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
+M + GI PD + +SMI G + +++A ++F MG ++ PN +++ LI G C
Sbjct: 328 EMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS-KSFSPNIVTFNTLITGYCKA 386
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G + EL EM R+G V ++ +Y +L+ G + ++ EMI D IT
Sbjct: 387 GMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITI 446
Query: 364 RTVLDEICRRGRAGEAMKLLKELQ 387
R +L + + A+ +L+ELQ
Sbjct: 447 RNMLTGLWSKEELKRALAMLEELQ 470
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 114/237 (48%), Gaps = 22/237 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I F + K S A + + M + P + +++ L A + G +
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRK---ISPDVVTFSGLINALVKEGD--------L 238
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV---------VYNY 286
+ + L ++M++ G+ P++ + N+++ G S + DAL +F M +N
Sbjct: 239 NSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNG 298
Query: 287 L-PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+ P+ +Y+ LI GL +G+ A EL +EM +G VP + +Y+S+++ L ++E
Sbjct: 299 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEAT 358
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ M K + +T+ T++ C+ G + ++L E+ + ++ + TY L+
Sbjct: 359 QMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLI 415
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 16/244 (6%)
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
L F T +NT+++ ++S A+ +F M C+P++ ++ L
Sbjct: 41 LTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM-------CKPNVVTFTTLMNGLCR 93
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
G+ +E + L +MV DG++P+ + +++ G AL + +M +
Sbjct: 94 EGR-------VVEAV-ALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEL 145
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+ P+ Y +I GL GR +A+ L EM+ KG P +Y+ +++ +G+ E
Sbjct: 146 SHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSE 205
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ L EM+ ++ D +T+ +++ + + G A LL+E+ + + + T LLD
Sbjct: 206 AQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLD 265
Query: 403 VLED 406
L D
Sbjct: 266 GLCD 269
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 119/264 (45%), Gaps = 28/264 (10%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY M ++ + E ++ +ML +P L N ++ + L+ A
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALV----KEGDLNSA 241
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN----- 247
+ + M +S P++ + N L GK +E + + K M++
Sbjct: 242 QDLLQEMISSG---VCPNVVTCNTLLDGLCDSGKLKD----ALEMFKAMQKSMMDIDATH 294
Query: 248 --DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCA 302
+G+EPD+ + N +I G I +A ++ +M G+V P++ +Y +I+GLC
Sbjct: 295 AFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV----PDTVTYSSMINGLCK 350
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
Q R A ++ D M K F P+ ++N+L++ G V++ ++ EM + + IT
Sbjct: 351 QSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT 410
Query: 363 YRTVLDEICRRGRAGEAMKLLKEL 386
Y T++ + G ++ + +E+
Sbjct: 411 YITLIRGFRKVGNINGSLDIFQEM 434
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 16/285 (5%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML-ATPSFCGTEALYNTIIY 181
F WASKQP +RH Y M + LG + + + ++ +M P F + ++ ++
Sbjct: 108 FFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFV-SPYVFVVLMR 166
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
FA AR + +A+ V M C P + L A G ++ E +R
Sbjct: 167 RFASARMVKKAIEVLDEMPK---YGCEPDEHVFGCLLDALCKNGSVKEAASLF-EDMRIR 222
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F P + S++ G+ + +A + Q+ + P+ Y+ L+ G
Sbjct: 223 FT--------PTLKHFTSLLYGWCREGKLMEAKYVLVQIREA-GFEPDIVVYNNLLTGYA 273
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
A G+ +A +L EM+RK P+ S+ +L+ AL ++EE ++ +EM P D +
Sbjct: 274 AAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAV 333
Query: 362 TYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVLE 405
TY T++ C+ G+ + +LL + Q ++ + TY ++ E
Sbjct: 334 TYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHE 378
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 31/189 (16%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YN ++ +A A K+ V + +K R EC P++ S+ L A ++ K V
Sbjct: 263 VVYNNLLTGYAAAGKM---VDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRV 319
Query: 234 YMETIRC---------------------------LFKQMVNDGIEPDIFSLNSMIKGYIL 266
+ E C L M+ G P+ + ++ +
Sbjct: 320 FFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEK 379
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ + + + +M + P+ Y+ +I C G K + +EM+ G P
Sbjct: 380 KEELEECIELMEEMRKI-GCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLD 438
Query: 327 SYNSLVSAL 335
++ ++
Sbjct: 439 TFVIMIHGF 447
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 109/232 (46%), Gaps = 13/232 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y+ +I+ +ARK+ A+ + MK + C P +YNIL G
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAF---CTPDTITYNILIDGLCKSGD------ 390
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+E R F +M+ G +PD+++ N ++ G+ + + + A +F M + PN +
Sbjct: 391 --VEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCS-PNVVT 447
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC + + A MK +G P S Y+SLV L +G++E L++ +
Sbjct: 448 YGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCM-LFDEM 506
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
E+ + T ++ +C+ R EA+ L ++ + + Y Y ++ L
Sbjct: 507 ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISTL 558
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 142/336 (42%), Gaps = 52/336 (15%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRF--RHDASTYHIMTRKLGAAK 151
AV L + + + + +D + ELF S PRF +H T + + K
Sbjct: 15 AVGRLRREISTDAVVKIFQCLKDADLAWELFQCLS-SPRFGFQHSVHTGNALLDVFARTK 73
Query: 152 MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
++E +++ LAT +F +N +I + AR+ A V + M+ + PS+
Sbjct: 74 RHREAGNLLKNELAT-TFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVA--PSL 130
Query: 212 RSYNILFTAFLSRGKN-TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+++N++ GK ++H F+ +G DI + +++ + +
Sbjct: 131 KTHNLVLHGLCKSGKVLAAMDH---------FETTTTNGCTIDIHTYTAIVDWLAKNKKI 181
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
DA+ + ++ P +Y+ L++GLC GR + A +L ++ G P +Y S
Sbjct: 182 QDAVALMEKI-TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 240
Query: 331 LVSAL----------------ALNGEVEETV------------------KNLWEMIEKQR 356
L+ L AL G V +TV ++++ + Q
Sbjct: 241 LIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQG 300
Query: 357 PV-DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
V D +T T++D +C+ GR G A+++ K ++ + L
Sbjct: 301 CVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGL 336
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L K + PD+ + N +I GY L+ +A + +M Y P+ +++ ++HGL
Sbjct: 81 LLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGL 140
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G+ A + + G +Y ++V LA N ++++ V + ++
Sbjct: 141 CKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTI 200
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
TY +L+ +C+ GR EA+ LL+++ N D TYT L+D L
Sbjct: 201 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 245
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 15/267 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D Y + R L A + V M T C + + +T+I +A ++ AV
Sbjct: 269 DTVCYTALIRGLLQAGKIPQASSVYKTM--TSQGCVPDVVTLSTMIDGLCKAGRIGAAVR 326
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+FK M+ +R L P+ Y+ L K M+ + QM PD
Sbjct: 327 IFKSME-ARGLA--PNEVVYSALIHGLCKARK--------MDCALEMLAQMKKAFCTPDT 375
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N +I G S V A F +M + P+ ++Y+ L+ G C G T A + D
Sbjct: 376 ITYNILIDGLCKSGDVEAARAFFDEM-LEAGCKPDVYTYNILVSGFCKAGNTDAACGVFD 434
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M P+ +Y +L+S L ++ + M E+ P D Y +++D +C+ G
Sbjct: 435 DMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSG 494
Query: 375 RAGEAMKLLKELQNKNLIDGYTYTKLL 401
+ L E++ + + T T+L+
Sbjct: 495 KLEGGCMLFDEMERSGVANSQTRTRLI 521
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 46/261 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y I+ + A+ +K+ AV + + + + C P+I +YN L G+ +
Sbjct: 168 YTAIVDWLAKNKKIQDAVALMEKITAN---GCTPTIATYNALLNGLCKMGR--------L 216
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL 287
E L +++V++G PD+ + S+I G +A ++F +M V Y L
Sbjct: 217 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTAL 276
Query: 288 --------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
P+ + +I GLC GR A + M+ +G
Sbjct: 277 IRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGL 336
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P+ Y++L+ L +++ ++ L +M + D ITY ++D +C+ G A
Sbjct: 337 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 396
Query: 382 LLKE-LQNKNLIDGYTYTKLL 401
E L+ D YTY L+
Sbjct: 397 FFDEMLEAGCKPDVYTYNILV 417
>gi|356514549|ref|XP_003525968.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Glycine max]
Length = 465
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 137/316 (43%), Gaps = 41/316 (12%)
Query: 107 LCNVMTLQEDPLVCLELF------NWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVV 160
L +++ +DP + L+LF + +P RH +Y ++ KL AKM+ +M+ ++
Sbjct: 12 LTSLLRSTKDPSLALQLFLNPNPNPNPNPRP-LRHSLRSYDLLITKLARAKMFPQMEQIL 70
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
+Q+ F E L +I +A AR SRA+ F + + R C P+++S+N L A
Sbjct: 71 HQLQTLTQFPVPEPLLCRVIISYARARLPSRALRTFLSIPSFR---CTPTLKSFNSLLHA 127
Query: 221 FL-------------------SRGKN--TY--------INHVYMETIRCLFKQMVNDGIE 251
L + G + TY +N+ + R LF +M+ G+
Sbjct: 128 LLLCRDFPSLPRLLPRLRHFSASGPDACTYNILIRACSLNNNDLAHARKLFDEMLTLGVR 187
Query: 252 PDIFSLNSMIKGYILSNHVN--DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
P + ++I H+N +A + M V+ PN F Y LI +C G A
Sbjct: 188 PTQVTFGTLINMLCKDPHLNLREAFSVKEDMERVFKLKPNVFVYTNLIKAVCEVGDFDCA 247
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
L DEM R YN+L SA+ G+ + L EM D +T ++ E
Sbjct: 248 FRLKDEMVRNNLRLDVVVYNTLTSAVFKAGKKGLGYRILEEMKSGGVKPDAVTCNVLIGE 307
Query: 370 ICRRGRAGEAMKLLKE 385
CR G EA ++L +
Sbjct: 308 FCREGNLVEAYRVLDD 323
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YNT+ +A K + + MK+ +P + N+L F G
Sbjct: 264 VVYNTLTSAVFKAGKKGLGYRILEEMKSG---GVKPDAVTCNVLIGEFCREGN------- 313
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+E R L + +G++PD+F N +I +A +F M +P+ +Y
Sbjct: 314 LVEAYRVLDDGV--EGVKPDVFGYNVVIGWLCKEGKWREADDLFRDMPR-RQCVPDVVTY 370
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ GLC + + A + +EM KG+VP S S N V L G+ E K L +
Sbjct: 371 RTVFDGLCQWMQFEEAGLVLEEMVFKGYVPCSSSLNEFVGRLCQEGDFELLGKVL-SGLG 429
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ ++TV+ +C+ + A +LL L
Sbjct: 430 GGFFCNENVWKTVVSLVCKSEKLSGAFELLDAL 462
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 28/281 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y+ + L K+ + ++ +M+A C + YNT+I +L A+ +
Sbjct: 151 DVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK-RICPSVVTYNTLICGLCIMAQLKDAIGL 209
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M + P++ +++IL AF GK M+ + +F M+ + ++P+I
Sbjct: 210 LHKMILE---DINPTVYTFSILIDAFCKEGK--------MKEAKNVFAVMMKEDVKPNIV 258
Query: 256 SLNSMIKGYILSN--------------HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+ NS++ G+ L N V++A+ +F +M Y P+ Y+ LI GLC
Sbjct: 259 TYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIY-PDMVIYNSLIDGLC 317
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
GRT A + EM +G P +YNSL+ AL N V++ ++ L ++ ++
Sbjct: 318 KSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVC 377
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
TY +++ +C+ GR +A K+ ++L K D YTY ++
Sbjct: 378 TYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMI 418
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F ++ G D + ++IKG L ++ AL FH V + N SY LI+GL
Sbjct: 69 VFANILKKGYGSDAITFTTLIKGLCLKGEIHKALH-FHDKVVAQGFKLNQVSYGTLINGL 127
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G+T+ A E + K P YN+++ L + V + +EM+ K+
Sbjct: 128 CKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSV 187
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+TY T++ +C + +A+ LL ++ +++ YT++ L+D
Sbjct: 188 VTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILID 230
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 24/214 (11%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
++++NT+I EA L ++ FK + P + YN L G+ Y
Sbjct: 276 AKSIFNTMIKMVDEAMNLFEEMH-FK--------QIYPDMVIYNSLIDGLCKSGRTPYAL 326
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLP 288
+M G PDIF+ NS++ + HV+ A+ + ++ G+ P
Sbjct: 327 K--------FIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGI----QP 374
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ +Y+ LI+GLC GR K+A ++ +++ KG+ +YN+++ G +ET+ +
Sbjct: 375 SVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMV 434
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
+M + D ++ + +G +A K
Sbjct: 435 SKMKDSGCSPDAKNCEIIIRSLFDKGENDKAGKF 468
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 34/174 (19%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYN----------------------- 285
P IF ++ + +NH + + + QM G+ N
Sbjct: 10 PSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSV 69
Query: 286 --------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
Y ++ ++ LI GLC +G A D++ +GF + SY +L++ L
Sbjct: 70 FANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCK 129
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
G+ ++ L + K D + Y T++D +C+ +A L E+ K +
Sbjct: 130 VGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRI 183
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 122/250 (48%), Gaps = 25/250 (10%)
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF-KYMKNSR 203
R+L A Y D +++Q L +P YN+II ++AR + +A V + +KN
Sbjct: 217 RQLDTA--YHLFDQMLDQGL-SPDV----VTYNSIISALSKARAMDKAAVVLVRMVKNG- 268
Query: 204 NLECRPSIRSYNILFTAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
P+ ++N L + S GK N I +FK+M DG+EPD+F+ N+++
Sbjct: 269 ---AMPNRITHNSLLHGYCSSGKPNDAIG---------VFKRMCRDGVEPDVFTYNTLM- 315
Query: 263 GYILSNHVN-DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
GY+ N + +A +IF M V + PNS +Y L+HG +G L D M R G
Sbjct: 316 GYLCKNGRSMEARKIFDSM-VKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGI 374
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P +N L+ +G+V++ + +M + D +TY V+D +C G+ +AM
Sbjct: 375 QPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMA 434
Query: 382 LLKELQNKNL 391
L ++ L
Sbjct: 435 QFGRLISEGL 444
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 143/339 (42%), Gaps = 91/339 (26%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + L A+ + V+ +M+ + +N++++ + + K + A+ V
Sbjct: 237 DVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMP-NRITHNSLLHGYCSSGKPNDAIGV 295
Query: 196 FKYM--------------------KNSRNLECR------------PSIRSYNILFTAFLS 223
FK M KN R++E R P+ +Y L + +
Sbjct: 296 FKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYAT 355
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--- 280
G ++H L MV +GI+PD + N +I Y V+DA+ +F +M
Sbjct: 356 EGSLVKMHH--------LLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQ 407
Query: 281 ---------GVVYNYL----------------------PNSFSYDYLIHGLCAQGRTKNA 309
G+V + L P++ + LIHGLCA+ + A
Sbjct: 408 GLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKA 467
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM---IEKQRPVDFITYRTV 366
EL EM +G P++ +N+L++ L G V KN++++ ++ QR D ITY T+
Sbjct: 468 EELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARA-KNIFDLMVRVDVQR--DVITYNTL 524
Query: 367 LDEICRRGRAGEAMKLLK----------ELQNKNLIDGY 395
+D C G+ EA KLL+ E+ +I+GY
Sbjct: 525 IDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGY 563
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 43/182 (23%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + SYN + L G+ ++T LF QM++ G+ PD+ + NS+I +
Sbjct: 200 PDVVSYNTVINGLLREGRQ-------LDTAYHLFDQMLDQGLSPDVVTYNSIISALSKAR 252
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ A + +M V +PN +++ L+HG C+ G+ +A + M R G P
Sbjct: 253 AMDKAAVVLVRM-VKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEP----- 306
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
D TY T++ +C+ GR+ EA K+ +
Sbjct: 307 ------------------------------DVFTYNTLMGYLCKNGRSMEARKIFDSMVK 336
Query: 389 KN 390
+
Sbjct: 337 RG 338
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 100/217 (46%), Gaps = 15/217 (6%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ +F+ M + P++ +Y+++ G +++ +++ G
Sbjct: 72 AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVG--------HLDLAFAALGRVIRSGWT 123
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+ + + ++K ++A+ I + V PN FSY L+ GLC + R++ A
Sbjct: 124 AEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALH 183
Query: 312 LCDEM-----KRKGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFITYRT 365
L M R G+ P SYN++++ L G +T +L+ +M+++ D +TY +
Sbjct: 184 LLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNS 243
Query: 366 VLDEICR-RGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
++ + + R A+ L++ ++N + + T+ LL
Sbjct: 244 IISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLL 280
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 94/242 (38%), Gaps = 45/242 (18%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
++N +I + + K+ A+ +F M R P +Y I+ A GK
Sbjct: 380 IFNILIGTYTKHGKVDDAMLLFSKM---RRQGLNPDTVTYGIVMDALCMVGK-------- 428
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNY 286
++ F +++++G+ PD ++I G + + A + +M + +N
Sbjct: 429 VDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNT 488
Query: 287 LPNSF--------------------------SYDYLIHGLCAQGRTKNARELCDEMKRKG 320
L N +Y+ LI G C G+ A +L + M G
Sbjct: 489 LLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDG 548
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+ +YN++++ NG +E+ +M K +TY T+L + + R A
Sbjct: 549 VKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAK 608
Query: 381 KL 382
+L
Sbjct: 609 EL 610
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E YNT+I + + ++ A +F+ M + P I +Y+ + +
Sbjct: 553 EVTYNTMINGYCKNGRIEDAFSLFRQMASK---GVNPGIVTYSTILQGLFQARRTAAAKE 609
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+Y+ M+ GI+ DI + N ++ G +N +DALRIF + ++ +L N +
Sbjct: 610 LYL--------WMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENR-T 660
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
++ +I L GR A++L + +G VP+ +Y ++ +L G
Sbjct: 661 FNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 707
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 153 YQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
Y+ MDD +N + + T Y+++I + S A + M + P
Sbjct: 883 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---INPD 939
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ +++ L AF+ GK +Y E MV I+P I + +S+I G+ + + +
Sbjct: 940 VFTFSALIDAFVKEGKLVEAEKLYDE--------MVKRSIDPSIVTYSSLINGFCMHDRL 991
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
++A ++F M V + P+ +Y+ LI G C R + E+ EM ++G V ++ +YN
Sbjct: 992 DEAKQMFEFM-VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ L G+ + + EM+ P + +TY T+LD +C+ G+ +AM + + LQ
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110
Query: 391 LIDG-YTYTKLLD 402
+ YTY +++
Sbjct: 1111 MEPTIYTYNIMIE 1123
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIR-----------------CL---------- 241
P++ +Y+ L AF+ GK ++ E +R CL
Sbjct: 361 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 420
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F MV+ G D+ S N++I G+ + V D +++F +M + N+ +Y+ LI G
Sbjct: 421 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGLVSNTVTYNTLIQGFF 479
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G A+E +M G P +YN L+ L NGE+E+ + +M +++ +D +
Sbjct: 480 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 539
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
TY TV+ +C+ G+ EA L L K L D TYT ++ L
Sbjct: 540 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 583
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 32/245 (13%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---------LSRG---KNTYINH--- 232
KL AV +F M SR PSI ++ L +A +S G +N I H
Sbjct: 675 KLDDAVALFGEMVKSRPF---PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 731
Query: 233 VYMETIRC------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
Y I C + +M+ G EP+I +L+S++ GY S +++A+ + QM
Sbjct: 732 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 791
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
V Y PN+ +++ LIHGL + A L D M KG P +Y +V+ L G+
Sbjct: 792 -FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 850
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
+ L +M + + + Y T++D +C+ +A+ L KE++ K + + TY+
Sbjct: 851 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 910
Query: 400 LLDVL 404
L+ L
Sbjct: 911 LISCL 915
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P I +YN + + K +N + FK++ GI P++ + +++ G S
Sbjct: 290 KPDIVAYNAIIDSLC---KTKRVNDAFD-----FFKEIERKGIRPNVVTYTALVNGLCNS 341
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ +DA R+ M + PN +Y L+ G+ A+EL +EM R P +
Sbjct: 342 SRWSDAARLLSDM-IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 400
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y+SL++ L L+ ++E + M+ K D ++Y T+++ C+ R + MKL +E+
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460
Query: 388 NKNLI-DGYTYTKLL 401
+ L+ + TY L+
Sbjct: 461 QRGLVSNTVTYNTLI 475
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F + +++ + VF+ M + R L + +YNIL G +
Sbjct: 1013 YNTLIKGFCKYKRVEEGMEVFREM-SQRGL--VGNTVTYNILIQGLFQAGDCDMAQEI-- 1067
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL------PN 289
FK+MV+DG+ P+I + N+++ G + + A+ VV+ YL P
Sbjct: 1068 ------FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM-------VVFEYLQRSKMEPT 1114
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
++Y+ +I G+C G+ ++ +L + KG P +YN+++S G EE
Sbjct: 1115 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 1174
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
EM E + Y T++ R G + +L+KE+++
Sbjct: 1175 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 1213
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 13/216 (6%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL+ A+ +F M SR PSI +N L +A + K + + L K+M
Sbjct: 168 KLNDAIDLFSDMVKSRPF---PSIVDFNRLLSAIVKLKK--------YDVVISLGKKMEV 216
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI D+++ N +I + V+ AL I +M + Y P+ + L++G C + R
Sbjct: 217 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKM-LKLGYEPDRVTIGSLVNGFCRRNRVS 275
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A L D+M G+ P +YN+++ +L V + E+ K + +TY ++
Sbjct: 276 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 335
Query: 368 DEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
+ +C R +A +LL ++ K + TY+ LLD
Sbjct: 336 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 371
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 46/262 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I F +L A+ V M L P+I + + L N Y + +
Sbjct: 733 YSILINCFCRRSQLPLALAVLGKM---MKLGYEPNIVTLSSLL--------NGYCHSKRI 781
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------------GVV 283
L QM G +P+ + N++I G L N ++A+ + +M GVV
Sbjct: 782 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 841
Query: 284 YNYL----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
N L P Y+ +I GLC +A L EM+ KG
Sbjct: 842 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 901
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P+ +Y+SL+S L G + + L +MIE++ D T+ ++D + G+ EA K
Sbjct: 902 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 961
Query: 382 LLKELQNKNLIDG-YTYTKLLD 402
L E+ +++ TY+ L++
Sbjct: 962 LYDEMVKRSIDPSIVTYSSLIN 983
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C + SYN L F + +E LF++M G+ + + N++I+G+
Sbjct: 429 CLADVVSYNTLINGFCKAKR--------VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 480
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ V+ A F QM + P+ ++Y+ L+ GLC G + A + ++M+++
Sbjct: 481 AGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 539
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y +++ + G+VEE + K D +TY T++ +C +G E L ++
Sbjct: 540 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 599
Query: 387 QNKNLI 392
+ + L+
Sbjct: 600 KQEGLM 605
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKL---GAAKMYQEMDDVVNQMLA--TPSFCGTEAL 175
+E+F S Q + TY+I+ + L G M QE + +M++ P T
Sbjct: 1030 MEVFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQE---IFKEMVSDGVPPNIMT--- 1082
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + KL +A+ VF+Y++ S+ P+I +YNI+ GK +
Sbjct: 1083 YNTLLDGLCKNGKLEKAMVVFEYLQRSK---MEPTIYTYNIMIEGMCKAGK--------V 1131
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF + G++PD+ + N+MI G+ +A +F +M LPNS Y+
Sbjct: 1132 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYNT 1190
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
LI G + + EL EM+ GF + + LV+ + +G ++++
Sbjct: 1191 LIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS 1238
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 158 DVVNQM--LATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
D NQM L C + + YNT+I F +A+++ + +F+ M + R L + +Y
Sbjct: 415 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGL--VSNTVTY 471
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N L F G ++ + F QM GI PDI++ N ++ G + + AL
Sbjct: 472 NTLIQGFFQAGD--------VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 523
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
IF M L + +Y +I G+C G+ + A L + KG P +Y +++S
Sbjct: 524 VIFEDMQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 582
Query: 335 LALNGEVEETVKNLWEMIEKQ 355
L G + E V+ L+ ++++
Sbjct: 583 LCTKGLLHE-VEALYTKMKQE 602
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 113/227 (49%), Gaps = 14/227 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+II F + + +A + +YM P+I +YN L G+ +
Sbjct: 659 YNSIISGFCKQGGIGKAFQLHEYMCQKG---ISPNIITYNALINGLCKAGE--------I 707
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R LF + G+ + + ++I GY S +++ A R+F +M + P+SF Y
Sbjct: 708 ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM-TLKGVPPDSFVYSA 766
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G +G T+ A L E +KGF +S S N+L+ +G+V E + L +M++K
Sbjct: 767 LIDGCRKEGNTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKH 825
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D +TY ++D C+ G EA + ++Q +NL+ + TYT LL
Sbjct: 826 VKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALL 872
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 15/229 (6%)
Query: 176 YNTIIYFFAEARKLSRAV-YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
YN++I ++RK+ A Y+ + ++ R L +P++ +Y L + G+
Sbjct: 519 YNSVIIGLCKSRKMEEAKDYLVEMIE--RGL--KPNVYTYGALIHGYCKSGE-------- 566
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
M+ FK+M+ GI P+ ++I GY +A IF M + + P+ +Y
Sbjct: 567 MQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCM-LGRSVHPDVRTYS 625
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LIHGL G+ + A EL E KG VP +YNS++S G + + + M +K
Sbjct: 626 ALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQK 685
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ ITY +++ +C+ G A +L + K L + TY ++D
Sbjct: 686 GISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIID 734
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P +R+Y+ L L GK ++ L + + G+ PD+F+ NS+I G+
Sbjct: 619 PDVRTYSALIHGLLRNGK--------LQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQG 670
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A ++ H+ PN +Y+ LI+GLC G + AREL D + KG ++ +Y
Sbjct: 671 GIGKAFQL-HEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTY 729
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+++ +G + + + EM K P D Y ++D + G +A+ L E
Sbjct: 730 ATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ 789
Query: 389 KNLIDGYTYTKLLDVLEDDFGNS 411
K G+ T L+ L D F S
Sbjct: 790 K----GFASTSSLNALMDGFCKS 808
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 22/309 (7%)
Query: 109 NVMTLQ-EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATP 167
+V+T Q DP L+ FNW Q F ++ I+ L ++++ D VVNQM+
Sbjct: 72 SVITKQVNDPKRLLDFFNWVQFQMGFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMS 131
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
S G + +++I E L+ N R + + +L + +G
Sbjct: 132 S-GGYSEILDSLIKSCKEF-DLNNVNGNENSNNNDRGV-------VFELLIDGYKKKG-- 180
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
++ E + F +G + N ++ + +N + R ++ M + N L
Sbjct: 181 -----LFDEAVS-FFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM-LEANVL 233
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
+ ++Y +LI+ G K + L EM+ KG PS +YN ++ L GEV+E +
Sbjct: 234 HDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFEL 293
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT-YTKLLD--VL 404
M +K D TY ++D ++ R EA +L+E+ +K L G+ YT L+D +
Sbjct: 294 KKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMR 353
Query: 405 EDDFGNSIR 413
+ D G + R
Sbjct: 354 QGDSGEAFR 362
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 19/198 (9%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P ++YN + +L +NT ++ L +M + P ++ +I G
Sbjct: 408 KPDTQTYNNMIEGYLKE-QNT-------SRVKDLLSEMKKSNLVPTAYTCGMIINGLCRH 459
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ DA R+F M V PN+ Y LI G +GR + A + M +KG P
Sbjct: 460 GSIEDASRVFEIM-VSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLC 518
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YNS++ L + ++EE L EMIE+ + TY ++ C+ G A + KE+
Sbjct: 519 YNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEML 578
Query: 388 N----------KNLIDGY 395
LIDGY
Sbjct: 579 GCGIAPNDVVCTALIDGY 596
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 9/182 (4%)
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
S S N L F GK N L + MV+ ++PD + +I + +
Sbjct: 794 STSSLNALMDGFCKSGKVIEANQ--------LLEDMVDKHVKPDHVTYTILIDYHCKTGF 845
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ +A + F M N +PN+ +Y L+ G GR L DEM K P +++
Sbjct: 846 LKEAEQFFVDMQK-RNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWS 904
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
++ A G+ +T+K + +M++K V ++D +CR+ E +K+L++++ +
Sbjct: 905 VMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQ 964
Query: 390 NL 391
L
Sbjct: 965 GL 966
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 136/304 (44%), Gaps = 29/304 (9%)
Query: 121 LELFNW----ASKQPRFRHDASTY-HIMTR--KLGAAKMYQEMDDVVNQMLATPSFCGTE 173
LELF W + HD TY H++ + G AK + + + + +PS
Sbjct: 217 LELF-WRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSL---- 271
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
YN +I A ++ A + K + + + L + +Y+IL F + + T
Sbjct: 272 VTYNVVIGGLCRAGEVDEA-FELKKLMDKKGL--VADVFTYSILIDGFGKQKRCT----- 323
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ + ++M + G++P + ++I G++ +A R+ +M + N F+Y
Sbjct: 324 ---EAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEM-LARGVKLNLFTY 379
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L+ G+C G + A L +EM G P +++YN+++ L + VK+L ++
Sbjct: 380 NALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGY-LKEQNTSRVKDLLSEMK 438
Query: 354 KQRPVDFI-TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFG 409
K V T +++ +CR G +A ++ + + + + + YT L+ V E F
Sbjct: 439 KSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQ 498
Query: 410 NSIR 413
++R
Sbjct: 499 EAVR 502
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 102/240 (42%), Gaps = 14/240 (5%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
F T +L N ++ F ++ K+ A + + M + +P +Y IL G
Sbjct: 791 GFASTSSL-NALMDGFCKSGKVIEANQLLEDMVDKH---VKPDHVTYTILIDYHCKTG-- 844
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
+++ F M + P+ + +++ GY ++ ++ +F +M + +
Sbjct: 845 ------FLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEM-IAKDIE 897
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+ ++ +I +G +L D+M +KG S + L+ L V E +K
Sbjct: 898 PDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKV 957
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVLED 406
L ++ E+ + T T++ + G+ A ++LK + + K + D L++V +D
Sbjct: 958 LEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQD 1017
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLDEGFRLKSAMLAS--- 206
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 207 GVQPDXYTYSVLINGLCKESK--------MDDANELFDEMLVKGLVPNGVTFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V+ A+ I+ +M + + LP+ +Y+ LI+GLC +G K A +L DEM KG P
Sbjct: 259 KKGRVDLAMEIYKRM-LSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 318 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLKPDTGTYTMIIN 395
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF-----HQMGVVYN---------------------- 285
DI+ + +I Y+ S + DA+ + H++ V ++
Sbjct: 71 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 286 -------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M+ D TY +++ +C+ + +A +L E+ K L+ +G T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250
Query: 398 TKLLD 402
T L+D
Sbjct: 251 TTLID 255
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 118/234 (50%), Gaps = 9/234 (3%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
TE ++ I +A AV F M N +L C+ +++S+N + + G +Y
Sbjct: 123 TETIFILIFKACGKAHLPGEAVNFFHRMAN--DLHCKQTVKSFNSVLNVIIQEGDFSYAF 180
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
Y+ K G +P++ + N +IK ++ A+ F +M + N P+ F
Sbjct: 181 KFYLHVFGANSK-----GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPL-KNCNPDVF 234
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y L++GLC + R A L DEM+ +G +P+ ++N L+ AL+ NG++ K + M
Sbjct: 235 TYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNM 294
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLL-KELQNKNLIDGYTYTKLLDVL 404
K + +TY T++ +C +G+ +A+ LL K + +K + + TY +++ L
Sbjct: 295 FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGL 348
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 20/284 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATP-SFCGTEAL-YNT 178
L +F SK F+ + TY+++ + L K+ Q +D V+ P C + Y+T
Sbjct: 184 LHVFGANSKG--FQPNLLTYNLIIKAL--CKLGQ-IDRAVDTFREMPLKNCNPDVFTYST 238
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
++ + R++ AV++ M+ C P+ ++N+L A G +
Sbjct: 239 LMNGLCKERRVDEAVFLLDEMQAE---GCLPNPVTFNVLIDALSKNGD--------LSRA 287
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
L M G P+ + N++I G L ++ AL + +M V +PN +Y +I+
Sbjct: 288 AKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM-VSSKCVPNQVTYGTIIN 346
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GL Q R ++ + M+ +G + Y+SL+S L G+ E V+ EM EK
Sbjct: 347 GLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKP 406
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ + Y +D +CR + EA +L+E+ +K + + +TY+ L+
Sbjct: 407 NVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLM 450
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 13/235 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E YNT+I+ KL +A+ + + M +S+ C P+ +Y + + + + H
Sbjct: 303 EVTYNTLIHGLCLKGKLDKALSLLEKMVSSK---CVPNQVTYGTIINGLVKQRRAEDGVH 359
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ M M G + + + +S+I G +A+R++ +M PN
Sbjct: 360 ILM--------SMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE-KGCKPNVVV 410
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y I GLC + A ++ EM KGF+P++ +Y+SL+ G+ ++ + EM+
Sbjct: 411 YGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMM 470
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
+ + + +L+ +C GR EA+ + + + L D Y+ ++ L D
Sbjct: 471 SQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCD 525
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 16/223 (7%)
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
E +Y+++I + K AV ++K M C+P++ Y K
Sbjct: 371 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEK---GCKPNVVVYGAFIDGLCRDEKPDEA 427
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
+ E M++ G P+ F+ +S++KG+ A+ ++ +M + + N
Sbjct: 428 EDILQE--------MLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM-MSQDMRHNV 478
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
L++GLC GR + A + M +G P +Y+S++ L G V++ +K +E
Sbjct: 479 VCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYE 538
Query: 351 MI---EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
M K RP D +TY + + +CR+ A+ LL + ++
Sbjct: 539 MQCQEPKSRP-DVVTYNILFNALCRQDNLTRAIDLLNSMLDEG 580
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E +D++ +ML+ F Y++++ F + +A+ V+K M + + R ++
Sbjct: 426 EAEDILQEMLSK-GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ---DMRHNVVCC 481
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
++L G+ + ++ M+ +G++PD+ + +SMIKG V+ L
Sbjct: 482 SVLLNGLCESGR--------LREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGL 533
Query: 275 RIFHQMGVVY-NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
++F++M P+ +Y+ L + LC Q A +L + M +G P S + N +
Sbjct: 534 KLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLE 593
Query: 334 AL 335
L
Sbjct: 594 TL 595
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 121/246 (49%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDAITKWSLRPSVVS----FNTLMNGYIKLGDLDEGFRLKNAMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ M + + P+ +Y+ LI+GLC +G K A++L DEM KG P
Sbjct: 253 KNGRVDLAMEIYKLM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G+++E + M D TY +++ +C+ + +A +L E+ + L+ +G
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 12/149 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+IY + L +A + M + + L +P +Y L G +
Sbjct: 279 YNTLIYGLCKKGDLKQAQDLIDEM-SMKGL--KPDKITYTTLIDGNCKEGD--------L 327
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
ET K+M+ + I D + ++I G DA ++ +M V P +Y
Sbjct: 328 ETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV-GLKPEIGTYTM 386
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+I+ C +G +L EM+R G++PS
Sbjct: 387 IINEFCKKGDVWTGSKLLKEMQRDGYMPS 415
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 120/246 (48%), Gaps = 16/246 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + + L + M+ S
Sbjct: 148 KEGEIRLAQSVFDSITKWGLRPSVVS----FNTLMNGYIKIGDLDEGFRLKSVMQASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + ++++L K M+ LF +M+B+G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTHSVLINGLCKESK--------MDDANELFDEMLBNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K +L DEM KG P
Sbjct: 253 KNGRVDLAMEIYRQM-LSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D Y ++ +C+ GR+ +A K+L+E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLRE 371
Query: 386 LQNKNL 391
+ + L
Sbjct: 372 MLSVGL 377
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H C +G + A+ + D + + G PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G+++E + M D T+ +++ +C+ + +A +L E+ B L+ +G
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ ++ L+ F W + H+ + + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHGAKNAEHALQFFRWVERSNLLEHNREIHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + +A + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKAGIVQESVKLFQKMEE---LGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF RG+ YM + R F +MVN+GIEP + N +I G+ LS V A
Sbjct: 118 YDALFKVISRRGR-------YMMSKR-YFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMKS-REITPDVITYNTMINGYNRVKKMEEAEKYFLEMKERKIDPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
A V++ ++ + EM + ITY T+L +C + EA +LKE+ +K
Sbjct: 229 GYASVDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDK 284
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 146/360 (40%), Gaps = 64/360 (17%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAA--- 150
++ L P F++E + NV+ ++ L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHGAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 151 -----------KMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLS--------- 190
K E D+ + +L S+ G E + + F + +L
Sbjct: 62 NHARCILLDMPKKGLEWDEDM-WVLMIDSY-GKEGIVQESVKLFQKMEELGVERTIKSYD 119
Query: 191 ----------RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------------- 226
R + +Y + P+ ++N++ F GK
Sbjct: 120 ALFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR 179
Query: 227 ---------NTYINHVY----METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
NT IN Y ME F +M IEP + + ++IKGY+ + V+DA
Sbjct: 180 EISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDA 239
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLV 332
LR+ +M Y PN+ +Y L+ GLC + AR + EM K P+ S + L+
Sbjct: 240 LRLVEEMK-GYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLI 298
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
S+ G ++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 299 SSQCKAGNLDAAADVLKSMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDII 358
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 23/240 (9%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
PSF E +YN + A+ A+ F++++ S E R ++ L G
Sbjct: 7 VPSF-DHELVYNVL----HGAKNSEHALQFFRWVERSNLFEHN---RETHLKIIEIL--G 56
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
+ + +NH RC+ M G+E D MI Y V +++++F +M GV
Sbjct: 57 RASKLNHA-----RCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELGV 111
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
SYD L + +GR A+ ++M G P+ ++N ++ L+G+VE
Sbjct: 112 ERTIK----SYDALFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVE 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+ +M ++ D ITY T+++ R + EA K E++ KN+ TYT L+
Sbjct: 168 TANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLI 227
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
++ SYNIL F + G +E F++M + P++ + N++I Y
Sbjct: 202 NVFSYNILIRGFCAAGN--------LEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKR 253
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+++A ++ MG+ PN +Y+ +I+GLC GR + + EM RKGF P +YN
Sbjct: 254 IDEAFKLLRSMGL-EGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYN 312
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+LV+ G + + EM+ P D +TY ++++ +C+ G AM+ ++ +
Sbjct: 313 TLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR 372
Query: 390 NL-IDGYTYTKLLD 402
L +G TYT L++
Sbjct: 373 GLRPNGVTYTSLIN 386
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 16/280 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+++ L +E V+ +M F YNT++ + + +A+ +
Sbjct: 275 TYNMVINGLCRVGRIEETSGVLAEM-DRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSE 333
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M RN P + +Y L G +N ME F QM G+ P+ +
Sbjct: 334 ML--RN-GLPPDVVTYTSLINTMCKAGN---LNRA-ME----FFDQMHVRGLRPNGVTYT 382
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
S+I G+ +++A RI+ +M + + P +Y+ L++G C GR + A L M+
Sbjct: 383 SLINGFSQKGFMDEAYRIWDEM-IRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEG 441
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG P SY+++++ E++ + EM+EK D ITY +++ +C + R E
Sbjct: 442 KGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNE 501
Query: 379 AMKLLKELQNKNLI-DGYTYTKLLD--VLEDDFGNSIRHH 415
A L +E+ NK+L+ D +TYT L++ E D ++ H
Sbjct: 502 ACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLH 541
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 13/232 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I F++ + A ++ M S P+I +YN L G+ M
Sbjct: 381 YTSLINGFSQKGFMDEAYRIWDEMIRSG---FPPTIVTYNALLNGHCVSGR--------M 429
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L + M G+ PD+ S +++I G+ ++ A ++ +M V P++ +Y
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEM-VEKGVSPDAITYSS 488
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC Q R A +L EM K +P +Y SL++ G++ E + EMI+K
Sbjct: 489 LIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKG 548
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVLED 406
D +TY +++ + ++ R EA +LL +L ++++ +G TY L++ D
Sbjct: 549 FLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSD 600
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 18/218 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + + L + E D+ +ML S E Y ++I + + L+ A+ +
Sbjct: 482 DAITYSSLIQGLCEQRRLNEACDLFQEML-NKSLLPDEFTYTSLINGYCKEGDLNEALNL 540
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M L P +YN+L + + + + + + + + +GI D
Sbjct: 541 HDEMIKKGFL---PDTVTYNVLINGLNKQARTREAKRLLL---KLFYDESIPNGITYDTL 594
Query: 256 ----------SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
S+ ++IKG+ + +N+A ++F M + N PN Y+ +IHG C G
Sbjct: 595 IESCSDIEFKSVVALIKGFCMKGLMNEADQVFESM-IKRNQKPNEAVYNVIIHGHCRDGN 653
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
A +L EM GF+P + + +LV AL G E+
Sbjct: 654 VHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQ 691
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 31/243 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS----RGKNTYIN 231
Y+TII + R+++ A+ +F YMK P+I +YN L + R + +N
Sbjct: 265 YSTIIDSLCKDRRVNEALDIFSYMKAK---GISPNIFTYNSLIQGLCNFSRWREASAMLN 321
Query: 232 HVYMETI-----------------------RCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ I R + K M G+EP++ + +S++ GY L
Sbjct: 322 EMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQA 381
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V +A ++F M + P+ FSY+ LI+G C R A++L +EM +G P SY
Sbjct: 382 EVVEARKLFDVM-ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 440
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+ L G + E M+ D TY +LD C++G +A +L + +Q+
Sbjct: 441 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 500
Query: 389 KNL 391
L
Sbjct: 501 TYL 503
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 24/300 (8%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L++F++ K + TY+ + + L ++E ++N+M++ + ++ +I
Sbjct: 282 LDIFSYM-KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSL-NIMPNIVTFSLLI 339
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
F + + A V K M + P++ +Y+ L N Y + R
Sbjct: 340 NIFCKEGNVFEARGVLKTMTE---MGVEPNVVTYSSLM--------NGYSLQAEVVEARK 388
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF M+ G +PD+FS N +I GY + + +A ++F++M + P+ SY+ LI GL
Sbjct: 389 LFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEM-IHQGLTPDIVSYNTLIDGL 447
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C GR + A +L M G +P +Y+ L+ G + + + M +
Sbjct: 448 CQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNM 507
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVLEDDFGN 410
+ Y ++D +C+ EA KL EL + L I+G LLD + F N
Sbjct: 508 VMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 567
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 12/219 (5%)
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
R + A+ F +M + + RP I +N L +A + + H Y + + L KQM
Sbjct: 100 RNIDDALAYFNHMLHRKP---RPCIIQFNKLLSAIVK------MRH-YHDAVISLSKQME 149
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
G+ PD ++L+ +I + V+ + ++ + +++ LI+GLC G+
Sbjct: 150 LAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI-IKLGLQLTIVTFNTLINGLCKVGKF 208
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
A EL D+M +G+ P +Y ++++ L GE +M E D +TY T+
Sbjct: 209 GQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTI 268
Query: 367 LDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+D +C+ R EA+ + ++ K + +TY L+ L
Sbjct: 269 IDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGL 307
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + +A+++ A +F M + P I SYN L G+ +
Sbjct: 405 YNILINGYCKAKRIGEAKQLFNEMIHQ---GLTPDIVSYNTLIDGLCQLGR--------L 453
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LFK M+ +G PD+ + + ++ G+ ++ A R+F M Y PN Y+
Sbjct: 454 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY-LKPNMVMYNI 512
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI +C K AR+L E+ +G P+ + Y ++++ L G ++E ++ M E
Sbjct: 513 LIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
P + +Y ++ + A++L+ E++ K +
Sbjct: 573 CPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFV 609
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML-- 164
L N +LQ + + +LF+ + + D +Y+I+ AK E + N+M+
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKG-CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ 431
Query: 165 -ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
TP YNT+I + +L A +FK M + NL P + +Y+IL F
Sbjct: 432 GLTPDIVS----YNTLIDGLCQLGRLREAHDLFKNMLTNGNL---PDLCTYSILLDGFCK 484
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
+G Y+ LF+ M + ++P++ N +I S ++ +A ++F ++ V
Sbjct: 485 QG--------YLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL-FV 535
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
PN Y +I+GLC +G A E M+ G P+ SYN ++ + +
Sbjct: 536 QGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESR 595
Query: 344 TVKNLWEMIEKQRPVDFIT 362
V+ + EM EK D T
Sbjct: 596 AVQLIGEMREKGFVADVAT 614
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 96/234 (41%), Gaps = 26/234 (11%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L R F + L + +I ++N L GK + + + LF MV
Sbjct: 169 QLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGK-------FGQAVE-LFDDMVA 220
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G +PD+ + ++I G A +F +MG P+ +Y +I LC R
Sbjct: 221 RGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEA-GCQPDVVTYSTIIDSLCKDRRVN 279
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A ++ MK KG P+ +YNSL+ L E L EM+ + +T+ ++
Sbjct: 280 EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 339
Query: 368 DEICRRGRAGEAMKLLKELQN----------KNLIDGYTYT-------KLLDVL 404
+ C+ G EA +LK + +L++GY+ KL DV+
Sbjct: 340 NIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 125/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 129 KDGDIRVAQSVFDAITKWGLRPS----AVSYNTLMNGYIRLGVLDEGFRLKSAMLAS--- 181
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 182 GVQPDVYTYSVLINGLCKESK--------MDDADELFDEMLVKGLVPNGVTFTTLIDGHC 233
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A +L D+M RKG P
Sbjct: 234 KNGRVDLAMEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDK 292
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G + ++ +I++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 293 ITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLRE 352
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 353 MLSVGLNPDTGTYTMIIN 370
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 97/237 (40%), Gaps = 21/237 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY ++ L + D++ ++ML + T+I + ++ A+ +
Sbjct: 186 DVYTYSVLINGLCKESKMDDADELFDEMLV-KGLVPNGVTFTTLIDGHCKNGRVDLAMEI 244
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+K M + L P + +YN L +G ++ L M G++PD
Sbjct: 245 YKQMLSQSLL---PDLITYNTLIYGLCKKGD--------LKQAHDLIDDMSRKGLKPDKI 293
Query: 256 SLNSMIKG----YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+ ++I G +L + R+ + N + Y LI GLC +GR+ +A +
Sbjct: 294 TYTTLIDGCCKEGVLVSAFEHRKRLIQE-----NIRLDDVVYTALISGLCQEGRSVDAEK 348
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
+ EM G P + +Y +++ G+V + K L EM +TY +++
Sbjct: 349 MLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 405
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF-----HQMGVVYN---------------------- 285
DI+ + +I Y+ S + DA+ + H++ V ++
Sbjct: 46 DIYVFSGLITAYLESGFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWGFY 105
Query: 286 -------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS+ SYN+L++
Sbjct: 106 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRL 165
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G ++E + M+ D TY +++ +C+ + +A +L E+ K L+ +G T+
Sbjct: 166 GVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTF 225
Query: 398 TKLLD 402
T L+D
Sbjct: 226 TTLID 230
>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 653
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 35/272 (12%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------- 226
+YN++IY+ +L A ++ M N R L P +Y+IL G
Sbjct: 358 VVYNSLIYWLYIEGELEEASFLLSDMINRRIL---PDEFTYSILTKGLCLSGHLNKALRV 414
Query: 227 ----------------NTYINHVY----METIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
N IN+++ + + L M+ GI+PD+ + +++ G+
Sbjct: 415 HYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCK 474
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ A++I+ + V + N Y+ ++ GLC QG AR L D++++ GF+ S
Sbjct: 475 EGKIEAAVQIYDKT-VKADGKSNLVVYNSILDGLCKQGSIDAARLLVDKLQQNGFL-DSV 532
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN+L+ +NGEVE+ EMI V+ ++Y +++ +C+ G +AM+L++ +
Sbjct: 533 TYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMRAM 592
Query: 387 QNKNLI-DGYTYTKLLDVLEDDFG--NSIRHH 415
++ ++ D TYT L+ +G N I H
Sbjct: 593 ASQGIVPDLITYTTLITNFVKSYGSDNVIELH 624
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 31/253 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YN II F + R+L A V M L + R+Y L + +G
Sbjct: 290 YNCIINGFCKIRRLESAKNVLAEMIK---LGIDSNERTYAPLIDGYARKGSLDVAFRLCD 346
Query: 227 --------------NTYINHVY----METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
N+ I +Y +E L M+N I PD F+ + + KG LS
Sbjct: 347 EMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILTKGLCLSG 406
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
H+N ALR+ H V N + ++++++ LI+ + A++L M +G P +Y
Sbjct: 407 HLNKALRV-HYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMVTY 465
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+LV+ G++E V+ + ++ + + Y ++LD +C++G A L+ +LQ
Sbjct: 466 GTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIDAARLLVDKLQQ 525
Query: 389 KNLIDGYTYTKLL 401
+D TY LL
Sbjct: 526 NGFLDSVTYNTLL 538
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/391 (19%), Positives = 150/391 (38%), Gaps = 87/391 (22%)
Query: 95 VSELPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRFRHD----ASTYHIMTRKLGA 149
+ ++ P N +C V+ + P + LE +NW + F H + H++
Sbjct: 49 LEQVSPSLTNSLVCRVVREFRNSPQLALEFYNWVEARDNFSHSLESCCTLVHVLVNSRNF 108
Query: 150 AKMYQEMD-----------DVVNQMLATPSFCGTE-ALYNTIIYFFAEARKLSRAVYVFK 197
M+ +V+ ++ + C + A+++ ++ + + + A V +
Sbjct: 109 NDALSIMESLMLKNGKSPLEVLGGLMNSYEICNSNPAVFDALVRTCTQLKSVEGAYDVIR 168
Query: 198 YMKNSRNLEC-RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND-------- 248
++ LE +I ++N L G+ ++YME + + + VN
Sbjct: 169 KLR----LEGFWVTIHAWNNFLNLLLKLGETDKFWNMYMEMVASGYSENVNTFNLIIYAL 224
Query: 249 -------------------GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY--NYL 287
I P++ S N +I ++ AL++ V+ +
Sbjct: 225 CKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKMGEMDLALKLTRNTEVISGGSVS 284
Query: 288 PNSFSYDYLIHGLCAQGRTKNAR-----------------------------------EL 312
PN +Y+ +I+G C R ++A+ L
Sbjct: 285 PNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGYARKGSLDVAFRL 344
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
CDEM +P + YNSL+ L + GE+EE L +MI ++ D TY + +C
Sbjct: 345 CDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILTKGLCL 404
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
G +A+++ + +NL+ D YT+ L++
Sbjct: 405 SGHLNKALRVHYYIVERNLVKDAYTHNILIN 435
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 15/124 (12%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN L F G+ +E LF +M+N G +I S N MI +
Sbjct: 533 TYNTLLHGFCVNGE--------VEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQ 584
Query: 273 ALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
A+ + M G+V P+ +Y LI + N EL D M KG VP ++Y
Sbjct: 585 AMELMRAMASQGIV----PDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVPDRQTYQ 640
Query: 330 SLVS 333
SLVS
Sbjct: 641 SLVS 644
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 124/252 (49%), Gaps = 34/252 (13%)
Query: 170 CGTEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG- 225
CG A +N +++ F + ++ A VF + RPS+ S+N L ++ G
Sbjct: 130 CGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WSLRPSVVSFNTLMNGYIKLGD 186
Query: 226 -------KN------------TY---INHV----YMETIRCLFKQMVNDGIEPDIFSLNS 259
KN TY IN + M+ LF +M+++G+ P+ + +
Sbjct: 187 LDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTT 246
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
+I G+ + V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K A++L DEM K
Sbjct: 247 LIDGHCKNRRVDVAMEIYKQM-LSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G P +Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 380 MKLLKELQNKNL 391
K+L+E+ + L
Sbjct: 366 EKMLREMLSVGL 377
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F++ + Y + + ++ L+H +G + A+ + D + + PS S+N+L++
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G+++E + M D TY +++ +C+ + +A +L E+ + L+ +G
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGV 242
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 243 TFTTLID 249
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 92/233 (39%), Gaps = 48/233 (20%)
Query: 127 ASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA 186
A + + D TY ++ L A + +++ ++ML + T+I +
Sbjct: 196 AMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDN-GLVPNGVTFTTLIDGHCKN 254
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
R++ A+ ++K M S++L P + +YN L +G ++ + L +M
Sbjct: 255 RRVDVAMEIYKQML-SQSLS--PDLITYNTLIYGLCKKGD--------LKQAQDLIDEMS 303
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
G++PD + ++I G + A +M + N + +Y LI GLC +GR+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRM-IKENIRLDDVAYTALISGLCQEGRS 362
Query: 307 KNAR-----------------------ELCD------------EMKRKGFVPS 324
+A E C+ EM+R G++PS
Sbjct: 363 VDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPS 415
>gi|15238810|ref|NP_197340.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635760|sp|Q94JX6.2|PP391_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g18390, mitochondrial; Flags: Precursor
gi|332005166|gb|AED92549.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L FNWA P + + Y + + L + K Y+ M ++ QM E L II
Sbjct: 95 LRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLC-FII 153
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ + + +AV +F + + L C+ ++ YN L A + + H IR
Sbjct: 154 EQYGKNGHVDQAVELFNGV--PKTLGCQQTVDVYNSLLHALC----DVKMFHGAYALIR- 206
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+M+ G++PD + ++ G+ + + +A +M + P + D LI GL
Sbjct: 207 ---RMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR-RGFNPPARGRDLLIEGL 262
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
G ++A+E+ +M + GFVP +++N L+ A++ +GEVE ++ + + VD
Sbjct: 263 LNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDI 322
Query: 361 ITYRTVLDEICRRGRAGEAMKLL 383
TY+T++ + + G+ EA +LL
Sbjct: 323 DTYKTLIPAVSKIGKIDEAFRLL 345
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 135/298 (45%), Gaps = 13/298 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V
Sbjct: 118 YNALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETX 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 229 GYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETXNRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 135/282 (47%), Gaps = 16/282 (5%)
Query: 124 FNWASKQPR--FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
F++ K R STY+++ L E D ++ +M + YN +I
Sbjct: 316 FDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEM-SEKGLVPDSVTYNILIN 374
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ + +A + M S+ ++ P+ +Y L RG+ M+ L
Sbjct: 375 GYCRCGNVKKAFTLHDEMI-SKGIQ--PTRVTYTSLIYVLSKRGR--------MKQADDL 423
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F+++V GI PD+ N++I G+ + +++ A + +M + +P+ +++ L+ G C
Sbjct: 424 FEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQM-KVVPDEVTFNTLMQGRC 482
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+G+ + AREL +EMK +G P SYN+L+S + G++++ + EM+ +
Sbjct: 483 REGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLL 542
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
TY ++ +C+ A +LLKE+ +K + + TY L++
Sbjct: 543 TYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIE 584
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + KL +A M+ L +P++ +YN + + SRG+ +
Sbjct: 194 FNIMINVLCKEGKLKKAKEFIGLMEA---LGIKPNVVTYNTIIHGYCSRGR--------V 242
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R +F M G++PD ++ S I G + +A + +M + P + +Y+
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEI-GLRPTAVTYNT 301
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G + A + D+M R+G +P+ +YN L+ AL L+ +++E + EM EK
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
D +TY +++ CR G +A L E+ +K + TYT L+ VL
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVL 411
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 26/278 (9%)
Query: 132 RFRHDASTYHIMTRKL---GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
R + T++IM L G K +E ++ + P+ YNTII+ + +
Sbjct: 186 RIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNV----VTYNTIIHGYCSRGR 241
Query: 189 LSRAVYVFKYMKNSRNLECR---PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
+ A +F MK CR P +Y + GK +E + ++M
Sbjct: 242 VEGARMIFDLMK------CRGVKPDSYTYGSFISGMCKEGK--------LEEASGMLEKM 287
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
G+ P + N++I GY ++ A +M V +P +Y+ LIH L +
Sbjct: 288 KEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKM-VREGLMPTVSTYNMLIHALFLDCK 346
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A + EM KG VP S +YN L++ G V++ EMI K +TY +
Sbjct: 347 MDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTS 406
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
++ + +RGR +A L +++ K + D + L+D
Sbjct: 407 LIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALID 444
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 14/219 (6%)
Query: 158 DVVNQMLATPSFCG--TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
+V N++ G T LY+ +I E ++ A F MK + P + + N
Sbjct: 104 EVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVI---PHVHACN 160
Query: 216 ILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
+ + FL + E L+ +M I+ + + N MI + A
Sbjct: 161 DMLSLFLKSNRT--------EKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKE 212
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
M + PN +Y+ +IHG C++GR + AR + D MK +G P S +Y S +S +
Sbjct: 213 FIGLMEAL-GIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGM 271
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
G++EE L +M E +TY T++D C +G
Sbjct: 272 CKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKG 310
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 35/264 (13%)
Query: 170 CGTEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
CG A +N +++ F + + A VF + RPS+ SYN L ++ G
Sbjct: 125 CGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITK---WGLRPSVVSYNTLMNGYIRLGD 181
Query: 227 ---------------------------NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNS 259
N M+ LF +M+ G+ P+ + +
Sbjct: 182 LDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTT 241
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
+I G+ + V+ A+ I+ QM + LP+ +Y+ L++GLC +G A L DEM K
Sbjct: 242 LIDGHCKNGRVDLAMEIYKQM-LSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXK 300
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G P +Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A
Sbjct: 301 GLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDA 360
Query: 380 MKLLKELQNKNL-IDGYTYTKLLD 402
K+L+E+ + L D TYT +++
Sbjct: 361 EKMLREMLSVGLKPDTGTYTMIIN 384
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
++KQM++ + PDJ + N+++ G +N A + +M P+ F+Y LI G
Sbjct: 258 IYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEM-XXKGLKPDKFTYTTLIDGC 316
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A E M ++ +Y +L+S L G + K L EM+ D
Sbjct: 317 CKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDT 376
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGYTYTKLLD 402
TY +++E C++G + KLLKE+Q N ++ TY L++
Sbjct: 377 GTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMN 419
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 47/200 (23%)
Query: 205 LECR--PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
LEC S+ +NIL F G + +F + G+ P + S N+++
Sbjct: 123 LECGYPASLYFFNILMHRFCKDGD--------IRVAPLVFDAITKWGLRPSVVSYNTLMN 174
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
GYI +++ R+ M P+ ++Y LI+GLC + +A EL DEM KG V
Sbjct: 175 GYIRLGDLDEGFRLKSAMRAS-GVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLV 233
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P+ +T+ T++D C+ GR AM++
Sbjct: 234 PNX-----------------------------------VTFTTLIDGHCKNGRVDLAMEI 258
Query: 383 LKELQNKNLI-DGYTYTKLL 401
K++ ++ L+ D TY L+
Sbjct: 259 YKQMLSQXLLPDJITYNTLV 278
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 134/279 (48%), Gaps = 26/279 (9%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY I+ A + Q+ + ++ML TP+ Y ++I+ + +ARK+ A +
Sbjct: 490 TYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNV----VTYTSLIHAYLKARKVFDANKL 545
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET--------IRCLFKQMVN 247
F+ M + +P++ +Y L G+ +Y I FK N
Sbjct: 546 FEMMLLEGS---KPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDN 602
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
D P+I + +++ G +N V +A + M V PN YD LI G C G+ +
Sbjct: 603 DCETPNIITYGALVDGLCKANRVEEAHELLDTMSV-NGCEPNQIVYDALIDGFCKTGKLE 661
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
NA+E+ +M +G+ P+ +Y+SL+++L ++ +K L +M+E + + Y ++
Sbjct: 662 NAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMI 721
Query: 368 DEICRRGRAGEAMKLLKELQN----KNLIDGYTYTKLLD 402
D +C+ G+ EA +L+ +++ N+I TYT ++D
Sbjct: 722 DGLCKVGKTEEAYRLMLKMEEVGCYPNVI---TYTAMID 757
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P+ Y+ L F GK +E + +F +M G P++++ +S+I
Sbjct: 640 CEPNQIVYDALIDGFCKTGK--------LENAQEVFVKMSERGYCPNLYTYSSLINSLFK 691
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++ L++ +M + + PN Y +I GLC G+T+ A L +M+ G P+
Sbjct: 692 EKRLDLVLKVLSKM-LENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVI 750
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y +++ G++E+ ++ +M K +FITYR +++ C G EA +LL E+
Sbjct: 751 TYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEM 810
Query: 387 QN----------KNLIDGY-----TYTKLLDVLEDD 407
+ + +I+G+ T LLD L ++
Sbjct: 811 KQTYWPRHISSYRKIIEGFNREFITSIGLLDELSEN 846
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 108/277 (38%), Gaps = 46/277 (16%)
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
+L F YN ++ EA A+ + M R++ C P++ +Y IL + L
Sbjct: 262 LLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRM---RSISCIPNVVTYRILLSGCL 318
Query: 223 SRGK--------------NTYIN--------HVYMET-----IRCLFKQMVNDGIEPDIF 255
+G+ Y N H Y ++ LFK+M+ G +P
Sbjct: 319 GKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 378
Query: 256 SLNSMIKGYILSNHV---NDALRIFHQ-------MGVVYNYLPNSFSYDYLIHGLCAQGR 305
N I G I SN +D L + + +GVV N + S LC G+
Sbjct: 379 LYNIFI-GSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVS----NFARCLCGAGK 433
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A E+ EM KGFVP +Y+ ++ L +VE+ EM + TY
Sbjct: 434 FDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTI 493
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
++D C+ G +A E+ N + TYT L+
Sbjct: 494 LIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLI 530
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 47/264 (17%)
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
M+ T ++N++++ + ++R S Y +K K C+P YNI +
Sbjct: 332 MMMTEGCYPNREMFNSLVHAYCKSRDYS---YAYKLFKKMIKCGCQPGYLLYNIFIGSIC 388
Query: 223 SRGK--------------------NTYINHVYMETI-RCL------------FKQMVNDG 249
S + +N V + RCL +M++ G
Sbjct: 389 SNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKG 448
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRT 306
PD + + +I ++ V A +F +M G+V P+ ++Y LI C G
Sbjct: 449 FVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIV----PSVYTYTILIDSFCKAGLI 504
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM--IEKQRPVDFITYR 364
+ AR DEM R P+ +Y SL+ A +V + K L+EM +E +P + +TY
Sbjct: 505 QQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANK-LFEMMLLEGSKP-NVVTYT 562
Query: 365 TVLDEICRRGRAGEAMKLLKELQN 388
++D C+ G+ +A ++ +Q
Sbjct: 563 ALIDGHCKAGQIDKACQIYARMQG 586
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 116/295 (39%), Gaps = 14/295 (4%)
Query: 101 RFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVV 160
R + + VM L + P C+E F WAS+Q + H Y+ + L + D V
Sbjct: 97 RLSEPLVVEVMNLVKHPEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVNN--DRVS 154
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
++ L E L + + + + + + ++ + S +YN L
Sbjct: 155 HKFLMQIRDDDRELLRKLLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQV 214
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
FL K ++T + ++M N G D +L + DAL + +
Sbjct: 215 FLRADK--------LDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEK- 265
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
++P++ Y+ ++ GLC + A ++ D M+ +P+ +Y L+S G+
Sbjct: 266 ---EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQ 322
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY 395
+ + L M+ + + + +++ C+ A KL K++ GY
Sbjct: 323 LGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGY 377
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 23/231 (9%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G+ M
Sbjct: 101 FDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGE--------M 152
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI---FHQMGVVYNYLPNSFS 292
+ +F + G+ P + S N+++ GYI +++ R+ H GV P+ ++
Sbjct: 153 RLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQ----PDVYT 208
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+GLC + + A EL +EM G VP+ ++ +L+ NG V+ ++ +++
Sbjct: 209 YSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLL 268
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ D ITY T++ +C++G +A L+ E+ K L D TYT L+D
Sbjct: 269 SQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLID 319
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 124/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS +NT++ + L + M S
Sbjct: 148 KEGEMRLAQSVFDAITKWGLRPSVVS----FNTLMSGYIRLGDLDEGFRLKSAMHASG-- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+++G+ P+ + ++I G+
Sbjct: 202 -VQPDVYTYSVLINGLCKESK--------MDEANELFNEMLDNGLVPNGVTFTTLIDGHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ Q+ + + P+ +Y+ LI GLC +G K AR+L DEM K P
Sbjct: 253 KNGRVDLAMEIYKQL-LSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GR+ +A K+L+
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRG 371
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 372 MLSVGLKPDNGTYTMIIN 389
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 21/232 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV-Y 234
Y I ++++ ++ A FK M +S I N+++T L +G N V
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSS-------GIVPNNVIYT-ILIKGHCDVGNTVEA 610
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
+ T +C M+ G+ PDI + +++I + +A+ +F + GVV P+ F
Sbjct: 611 LSTFKC----MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV----PDVF 662
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
Y+ LI G C +G + A +L DEM G P+ YN+L++ L GEV + + E+
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEI 722
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
EK D +TY T++D C+ G EA KL E+ +K + DGY Y L+D
Sbjct: 723 EEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILID 774
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 130/297 (43%), Gaps = 20/297 (6%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
LC ++E ++ +++ + + +A TY + Q + ML++
Sbjct: 531 LCRAKKVEEAKMLLVDM-----GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS 585
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
+Y +I + A+ FK M + P IR+Y+ + + GK
Sbjct: 586 -GIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLI---PDIRAYSAIIHSLSKNGK 641
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
V+++ ++ G+ PD+F NS+I G+ + A +++ +M ++N
Sbjct: 642 TKEAMGVFLKFLKT--------GVVPDVFLYNSLISGFCKEGDIEKASQLYDEM--LHNG 691
Query: 287 L-PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+ PN Y+ LI+GLC G AREL DE++ K VP +Y++++ +G + E
Sbjct: 692 INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAF 751
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLD 402
K EMI K D Y ++D + G +A+ L E Q K++ + L+D
Sbjct: 752 KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLID 808
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 119/263 (45%), Gaps = 19/263 (7%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKL 189
+ + TY+ M + A + + N+ML G E YN +I + ++ +
Sbjct: 377 LKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML----MAGLEPDTWTYNLLIDGYLKSHDM 432
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
++A + MK +R L PS +Y++L + N V QM+ +G
Sbjct: 433 AKACELLAEMK-ARKL--TPSPFTYSVLISGLCHSSDLQKANEV--------LDQMIRNG 481
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
++P++F ++IK Y+ + A+ + M + LP+ F Y+ LI GLC + + A
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIM-IANGVLPDLFCYNCLIIGLCRAKKVEEA 540
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+ L +M KG P++ +Y + ++ + +GE++ + +M+ + + Y ++
Sbjct: 541 KMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKG 600
Query: 370 ICRRGRAGEAMKLLKELQNKNLI 392
C G EA+ K + K LI
Sbjct: 601 HCDVGNTVEALSTFKCMLEKGLI 623
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+P++F+ N+ I G + V++AL + ++ + P+ +Y L+ G C Q R+K A+
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEV-KKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK 331
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ + M G P+ +Y +L+ G +EE ++ EMI + ++ +TY ++ I
Sbjct: 332 LIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGI 391
Query: 371 CRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ G +AM L E+ L D +TY L+D
Sbjct: 392 AKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLID 424
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 13/229 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I F + + A+ + M +R L + ++ +YN + G+ M
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMI-TRGL--KLNVVTYNAMIGGIAKAGE--------M 397
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +M+ G+EPD ++ N +I GY+ S+ + A + +M P+ F+Y
Sbjct: 398 AKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKA-RKLTPSPFTYSV 456
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC + A E+ D+M R G P+ Y +L+ A E ++ L MI
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDV 403
D Y ++ +CR + EA LL ++ K + + +TY +++
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINL 565
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 10/200 (5%)
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
EC+P++ +YN G V K M+ G+ PD + ++ G+
Sbjct: 271 ECKPNLFTYNAFIGGLCQTGAVDEALEVK--------KLMMEKGLGPDGHTYTLLVDGFC 322
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+A IF M PN F+Y LI G +G + A + DEM +G +
Sbjct: 323 KQKRSKEAKLIFESMPS-SGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNV 381
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+YN+++ +A GE+ + + EM+ D TY ++D + +A +LL E
Sbjct: 382 VTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAE 441
Query: 386 LQNKNLIDG-YTYTKLLDVL 404
++ + L +TY+ L+ L
Sbjct: 442 MKARKLTPSPFTYSVLISGL 461
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 59/278 (21%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YNT+I + ++++A +F ++ + P + +Y+ + + G T
Sbjct: 697 VVYNTLINGLCKLGEVTKARELFDEIEEK---DLVPDVVTYSTIIDGYCKSGNLT----- 748
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
E + LF +M++ GI PD + +I G ++ AL +FH+ + + ++
Sbjct: 749 --EAFK-LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE--AQQKSVGSLSAF 803
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET--------- 344
+ LI C G+ AREL D+M K P+ +Y L+ A +EE
Sbjct: 804 NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMET 863
Query: 345 -------------------VKNLWEMIE-----KQRPV--DFITYRTVLDEICRRGRAGE 378
+ N ++MI + R + D I Y + C+ G++ E
Sbjct: 864 RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLE 923
Query: 379 AMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNSIRHHL 416
A+KLL NK+L++G LEDD +++ HL
Sbjct: 924 ALKLL----NKSLVEGIK-------LEDDVFDALIFHL 950
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 12/211 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN I + + A+ V K M P +Y +L F + ++
Sbjct: 279 YNAFIGGLCQTGAVDEALEVKKLMMEKG---LGPDGHTYTLLVDGFCKQKRS-------- 327
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + +F+ M + G+ P+ F+ ++I G+I ++ +ALRI +M + N +Y+
Sbjct: 328 KEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEM-ITRGLKLNVVTYNA 386
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+ G A L +EM G P + +YN L+ + ++ + + L EM ++
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
TY ++ +C +A ++L ++
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 12/238 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I A+A ++++A+ +F M + LE P +YN+L +L +H
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMA-GLE--PDTWTYNLLIDGYLK-------SHDMA 433
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L +M + P F+ + +I G S+ + A + QM + PN F Y
Sbjct: 434 KACE-LLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM-IRNGVKPNVFMYGT 491
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI + R + A EL M G +P YN L+ L +VEE L +M EK
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNSIR 413
+ TY ++ + G A + K++ + ++ +L D GN++
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVE 609
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 17/195 (8%)
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
DD+V++ L TP+ Y +I + +A + A +F M+ +RN+ P+ +Y
Sbjct: 824 DDMVDKKL-TPNI----VTYTILIDAYGKAEMMEEAEQLFLDME-TRNI--IPNTLTYTS 875
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
L ++ N N M + LFK M GI D + M Y +AL++
Sbjct: 876 LLLSY-----NQIGNRFKMIS---LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKL 927
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
++ V L + +D LI LC + + EL EM ++ SSK+ N+L+
Sbjct: 928 LNKSLVEGIKLEDDV-FDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFY 986
Query: 337 LNGEVEETVKNLWEM 351
+G +E K L M
Sbjct: 987 KSGNEDEASKVLGVM 1001
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 92/197 (46%), Gaps = 17/197 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY I+ G A+M +E + + M T + Y +++ + + + + +FK
Sbjct: 837 TYTILIDAYGKAEMMEEAEQLFLDM-ETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKD 895
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI--EPDIFS 256
M+ +R + C +Y ++ +A+ GK+ +E ++ L K +V +GI E D+F
Sbjct: 896 ME-ARGIACDAI--AYGVMASAYCKEGKS-------LEALKLLNKSLV-EGIKLEDDVF- 943
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
+++I ++ L + +MG L +S + + L+ G G A ++ M
Sbjct: 944 -DALIFHLCKEKQISTVLELLSEMGKEELSL-SSKTCNTLLLGFYKSGNEDEASKVLGVM 1001
Query: 317 KRKGFVPSSKSYNSLVS 333
+R G+VP+S S +S
Sbjct: 1002 QRLGWVPTSLSLTDSIS 1018
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 118/234 (50%), Gaps = 9/234 (3%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
TE ++ I +A AV F M N +L C+ +++S+N + + G +Y
Sbjct: 99 TETIFILIFKACGKAHLPGEAVNFFHRMAN--DLHCKQTVKSFNSVLNVIIQEGDFSYAF 156
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
Y+ K G +P++ + N +IK ++ A+ F +M + N P+ F
Sbjct: 157 KFYLHVFGANSK-----GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPL-KNCNPDVF 210
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y L++GLC + R A L DEM+ +G +P+ ++N L+ AL+ NG++ K + M
Sbjct: 211 TYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNM 270
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLL-KELQNKNLIDGYTYTKLLDVL 404
K + +TY T++ +C +G+ +A+ LL K + +K + + TY +++ L
Sbjct: 271 FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGL 324
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 20/284 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATP-SFCGTEAL-YNT 178
L +F SK F+ + TY+++ + L K+ Q +D V+ P C + Y+T
Sbjct: 160 LHVFGANSKG--FQPNLLTYNLIIKAL--CKLGQ-IDRAVDTFREMPLKNCNPDVFTYST 214
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
++ + R++ AV++ M+ C P+ ++N+L A G +
Sbjct: 215 LMNGLCKERRVDEAVFLLDEMQAE---GCLPNPVTFNVLIDALSKNGD--------LSRA 263
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
L M G P+ + N++I G L ++ AL + +M V +PN +Y +I+
Sbjct: 264 AKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM-VSSKCVPNQVTYGTIIN 322
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GL Q R ++ + M+ +G + Y+SL+S L G+ E V+ EM EK
Sbjct: 323 GLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKP 382
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ + Y +D +CR + EA +L+E+ +K + + +TY+ L+
Sbjct: 383 NVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLM 426
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 13/235 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E YNT+I+ KL +A+ + + M +S+ C P+ +Y + + + + H
Sbjct: 279 EVTYNTLIHGLCLKGKLDKALSLLEKMVSSK---CVPNQVTYGTIINGLVKQRRAEDGVH 335
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ M M G + + + +S+I G +A+R++ +M PN
Sbjct: 336 ILM--------SMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE-KGCKPNVVV 386
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y I GLC + A ++ EM KGF+P++ +Y+SL+ G+ ++ + EM+
Sbjct: 387 YGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMM 446
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
+ + + +L+ +C GR EA+ + + + L D Y+ ++ L D
Sbjct: 447 SQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCD 501
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 16/221 (7%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y+++I + K AV ++K M C+P++ Y K
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEK---GCKPNVVVYGAFIDGLCRDEKPDEAED 405
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ E M++ G P+ F+ +S++KG+ A+ ++ +M + + N
Sbjct: 406 ILQE--------MLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM-MSQDMRHNVVC 456
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
L++GLC GR + A + M +G P +Y+S++ L G V++ +K +EM
Sbjct: 457 CSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQ 516
Query: 353 ---EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
K RP D +TY + + +CR+ A+ LL + ++
Sbjct: 517 CQEPKSRP-DVVTYNILFNALCRQDNLTRAIDLLNSMLDEG 556
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E +D++ +ML+ F Y++++ F + +A+ V+K M + + R ++
Sbjct: 402 EAEDILQEMLSK-GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQ---DMRHNVVCC 457
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
++L G+ + ++ M+ +G++PD+ + +SMIKG V+ L
Sbjct: 458 SVLLNGLCESGR--------LREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGL 509
Query: 275 RIFHQMGVVY-NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
++F++M P+ +Y+ L + LC Q A +L + M +G P S + N +
Sbjct: 510 KLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLE 569
Query: 334 AL 335
L
Sbjct: 570 TL 571
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 115/228 (50%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I + +S A + M N + LE P++ +Y L + S+GK IN
Sbjct: 440 YNSLINGHCKFGDISAAESLMAEMIN-KKLE--PTVVTYTSLMGGYCSKGK---IN---- 489
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +R L+ +M GI P I++ +++ G + + DA+++F +M +N PN +Y+
Sbjct: 490 KALR-LYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAE-WNVKPNRVTYNV 547
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G C +G A E +EM KG VP + SY L+ L L G+ E + + +
Sbjct: 548 MIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
++ I Y +L CR G+ EA+ + +++ + + +D Y L+D
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLID 655
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN +I + R A +F M + P+ +Y+IL F RGK
Sbjct: 369 VYNALIDSLCKGRNFDEAELLFDRMGK---IGLCPNDVTYSILIDMFCRRGK-------- 417
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++T +M++ G++P ++ NS+I G+ ++ A + +M + P +Y
Sbjct: 418 LDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEM-INKKLEPTVVTYT 476
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ G C++G+ A L EM KG VPS ++ +L+S L G + + VK EM E
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEW 536
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ +TY +++ C G +A + L E+ K ++ D Y+Y L+
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLI 584
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 134/343 (39%), Gaps = 65/343 (18%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY--------------QEMDDVV 160
+DP + L FN+ F H +++ I+ L A ++ + +V
Sbjct: 82 DDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVF 141
Query: 161 NQMLATPSFC--GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
+ + + C + + ++ +I + +R++ V VFK M +L P +R+ + L
Sbjct: 142 DALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSL--LPEVRTLSALL 199
Query: 219 TAFLSRGKNTYINH--VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
+ H + ME LF M+N GI PD++ +I+ ++ A +
Sbjct: 200 HGLVK------FRHFGLAME----LFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 277 FHQMG--------VVYNYL--------------------------PNSFSYDYLIHGLCA 302
QM V YN L P+ +Y L+ GLC
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ E+ DEM R F PS + +SLV L G+VEE + + + E +
Sbjct: 310 VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFV 369
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
Y ++D +C+ EA L + L + TY+ L+D+
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMF 412
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 16/271 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSR 191
R D Y + R L K +++ QM AT C + YN +I + +K+
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATG--CDVNIVPYNVLIDGLCKKQKVWE 280
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
AV + K + E +P + +Y L + V +E I +M+
Sbjct: 281 AVGIKKDLAGK---ELKPDVVTYCTLVCGLCKVQEF----EVGLEMI----DEMLRLRFS 329
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P +++S+++G V +AL + ++ + PN F Y+ LI LC A
Sbjct: 330 PSEAAVSSLVEGLRKRGKVEEALNLVKRVAE-FGVSPNIFVYNALIDSLCKGRNFDEAEL 388
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L D M + G P+ +Y+ L+ G+++ + L EMI+ Y ++++ C
Sbjct: 389 LFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHC 448
Query: 372 RRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+ G A L+ E+ NK L TYT L+
Sbjct: 449 KFGDISAAESLMAEMINKKLEPTVVTYTSLM 479
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 99/254 (38%), Gaps = 47/254 (18%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y +++ F KL A+ V + M R ++ + Y +L L H
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQDM-GLRGVDL--DLVCYGVLIDGSL--------KH 660
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ L K+M + G++PD SMI + +A I+ M + +PN +
Sbjct: 661 KDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM-INEGCVPNEVT 719
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKR---------------------------------- 318
Y +I+GLC G A LC +M+
Sbjct: 720 YTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAI 779
Query: 319 -KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG + ++ +YN L+ G +EE + + MI D ITY T++ E+CRR
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVK 839
Query: 378 EAMKLLKELQNKNL 391
+A++L + K +
Sbjct: 840 KAIELWNSMTEKGI 853
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN+L F +G+ ME L +M+ DG+ PD + +MI N V
Sbjct: 789 TYNMLIRGFCRQGR--------MEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKK 840
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A+ +++ M P+ +Y+ LIHG C G A EL +EM R+G P++++ + +
Sbjct: 841 AIELWNSM-TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899
Query: 333 S 333
S
Sbjct: 900 S 900
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 107/272 (39%), Gaps = 50/272 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T++ A + AV +F M +P+ +YN++ + G M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFTEMAE---WNVKPNRVTYNVMIEGYCEEGN--------M 558
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+M+ GI PD +S +I G L+ ++A ++F N N Y
Sbjct: 559 SKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTG 617
Query: 296 LIHGLCAQGRTKNARELCD-----------------------------------EMKRKG 320
L+HG C +G+ + A +C EM +G
Sbjct: 618 LLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRG 677
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV-DFITYRTVLDEICRRGRAGEA 379
P Y S++ A + G+ +E +W+++ + V + +TY V++ +C+ G EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAF-GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 380 MKLLKELQNKNLI-DGYTYTKLLDVLEDDFGN 410
L +++ N + + TY LD+L G+
Sbjct: 737 EILCSKMRPGNSVPNQVTYGCFLDILTKGVGD 768
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-------------------- 280
++ M+N+G P+ + ++I G + VN+A + +M
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILT 763
Query: 281 --------------GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++ L N+ +Y+ LI G C QGR + A EL M G P
Sbjct: 764 KGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCI 823
Query: 327 SYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +++S L +V++ ++ LW M EK D + Y T++ C G G+A +L E
Sbjct: 824 TYTTMISELCRRNDVKKAIE-LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 386 LQNKNL 391
+ + L
Sbjct: 883 MLRQGL 888
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 178/403 (44%), Gaps = 73/403 (18%)
Query: 59 SCYSAIALSRSSSRGVGKRSKADSKPALDDTQFRCA--VSELPPRFNNEELCNVMTLQED 116
S + A+ SR + + R A L Q++ + + +L P+ + ++ + +D
Sbjct: 32 SSHFAVPASREPFQAIVSRVCA----ILSRVQWKGSSELKQLSPQLKAHHVAEIVAVHKD 87
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV----------------V 160
++ F W SK+P ++H+ + + M +L +++ D + V
Sbjct: 88 TESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRV 147
Query: 161 NQMLATPSFCGTE-ALY--NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
L S G +LY NT++ A+ + A ++K M NS +PS+ ++N L
Sbjct: 148 ADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG---IQPSLLTFNTL 204
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+GK + + Q+ + PD+F+ S+I G+ + +++ A +F
Sbjct: 205 INILSKKGK--------VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF 256
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE---------------------- 315
+M V PNS +Y LI+GLC +GR A ++ +E
Sbjct: 257 DRM-VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 315
Query: 316 -------------MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
MK++G P+ ++Y +L+S L+ G++E + +M+++ + +T
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGYTYTKLLDVL 404
Y +++E+C GR A+K+ ++ + +L + TY +++ L
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 14/264 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + +L + + + M S T+ YN II + +A+ +F+
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQT-YNEIIKGLCLGGDIEKAMVLFEK 433
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M L P++ +YN L +L++G +N+ L M +G EPD ++ N
Sbjct: 434 MLKMGPL---PTVVTYNTLINGYLTKGN---VNNAAR-----LLDLMKENGCEPDEWTYN 482
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++ G+ + A F +M V PN SY LI G G+ A L M+
Sbjct: 483 ELVSGFSKWGKLESASFYFQEM-VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G P+ +SYN++++ L+ E K +M+E+ + ITY T++D +CR GR
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601
Query: 379 AMKLLKELQN-KNLIDGYTYTKLL 401
A K+ +++ K L + YTY+ L+
Sbjct: 602 AFKIFHDMEKRKCLPNLYTYSSLI 625
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 131/276 (47%), Gaps = 15/276 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L++F+W + TY+ + + L ++ + +ML T YNT+I
Sbjct: 393 LKIFHWMEGHGSLA-NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLI 450
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ ++ A + MK + C P +YN L + F GK +E+
Sbjct: 451 NGYLTKGNVNNAARLLDLMKENG---CEPDEWTYNELVSGFSKWGK--------LESASF 499
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
F++MV G+ P+ S ++I G+ V+ AL + +M + PN SY+ +I+GL
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM-GCNPNVESYNAVINGL 558
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ R A ++CD+M +G +P+ +Y +L+ L NG + K +M +++ +
Sbjct: 559 SKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
TY +++ +C+ G+A EA + + E+ + +D Y+
Sbjct: 619 YTYSSLIYGLCQEGKADEAER-MSEIGCEPTLDTYS 653
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 21/232 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY- 234
YN +I ++ + S A + M L P++ +Y L G+ + ++
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLL---PNVITYTTLIDGLCRNGRTQFAFKIFH 607
Query: 235 -METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
ME +CL P++++ +S+I G ++A R+ ++G P +Y
Sbjct: 608 DMEKRKCL----------PNLYTYSSLIYGLCQEGKADEAERM-SEIGCE----PTLDTY 652
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
L+ GLC +GR A +L +MK +GF P + Y SL+ A N EV+ +K +
Sbjct: 653 STLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEA 712
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
K + YR ++ +C+ G+ EA L + K D +T L+D L
Sbjct: 713 KGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 764
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 88/163 (53%), Gaps = 4/163 (2%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +M G P++ + ++I G + A+ ++H+M + +PN+ +Y+ LI+ L
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM-LKEGLVPNTVTYNALINEL 383
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV-D 359
C GR A ++ M+ G + ++++YN ++ L L G++E+ + L+E + K P+
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV-LFEKMLKMGPLPT 442
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
+TY T+++ +G A +LL + +N D +TY +L+
Sbjct: 443 VVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 485
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 106/282 (37%), Gaps = 78/282 (27%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I ++ K+ A+ + K M+ + C P++ SYN + + + +
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEE---MGCNPNVESYNAVINGLSKENRFSEAEKI-- 570
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
C +MV G+ P++ + ++I G + A +IFH M LPN ++Y
Sbjct: 571 ----C--DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK-RKCLPNLYTYSS 623
Query: 296 LIHGLCAQGRTKNAR-------------------------------ELCDEMKRKGFVPS 324
LI+GLC +G+ A +L +MK +GF P
Sbjct: 624 LIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 683
Query: 325 SKSYNSL-----------------------------------VSALALNGEVEETVKNLW 349
+ Y SL + AL G+VEE
Sbjct: 684 REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 743
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
M+EK+ D I + ++D + + G MKLL +++KN
Sbjct: 744 NMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNF 785
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++IY + K A + + C P++ +Y+ L + +G+ +
Sbjct: 621 YSSLIYGLCQEGKADEA-------ERMSEIGCEPTLDTYSTLVSGLCRKGR-------FY 666
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L K M G PD S++ + + V+ AL+IFH + L S Y
Sbjct: 667 EAEQ-LVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSI-YRA 724
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI LC G+ + A+ L D M K + + LV L GE++ +K L M K
Sbjct: 725 LICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKN 784
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKL---LKELQNKN 390
+ TY + E+ R G++ E+ L LK L++ N
Sbjct: 785 FTPNIQTYVILGRELSRIGKSIESEPLADKLKVLKDSN 822
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 127/281 (45%), Gaps = 16/281 (5%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML-ATPSFCGTEALYNTIIY 181
F WASKQP +RH Y M + LG + + + ++ +M P F + ++ ++
Sbjct: 141 FFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFV-SPYVFVVLMR 199
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
FA AR + +A+ V M C P + L A G ++ E +R
Sbjct: 200 RFASARMVKKAIEVLDEMPK---YGCEPDEHVFGCLLDALCKNGSVKEAASLF-EDMRIR 255
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F P + S++ G+ + +A + Q+ + P+ Y+ L+ G
Sbjct: 256 FT--------PTLKHFTSLLYGWCREGKLMEAKYVLVQIREA-GFEPDIVVYNNLLTGYA 306
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
A G+ +A +L EM+RK P+ S+ +L+ AL ++EE ++ +EM P D +
Sbjct: 307 AAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAV 366
Query: 362 TYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
TY T++ C+ G+ + +LL + Q ++ + TY ++
Sbjct: 367 TYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIM 407
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/186 (17%), Positives = 68/186 (36%), Gaps = 31/186 (16%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YN ++ +A A K+ A + +K R EC P++ S+ L A ++ K V
Sbjct: 296 VVYNNLLTGYAAAGKMVDA---YDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRV 352
Query: 234 YMETIRC---------------------------LFKQMVNDGIEPDIFSLNSMIKGYIL 266
+ E C L M+ G P+ + ++ +
Sbjct: 353 FFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEK 412
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ + + + +M + P+ Y+ +I C G K + +EM+ G P
Sbjct: 413 KEELEECIELMEEMRKI-GCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLD 471
Query: 327 SYNSLV 332
++ ++
Sbjct: 472 TFVIMI 477
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 109/218 (50%), Gaps = 18/218 (8%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
+I + + ++S A+ V + MK C+P++ +YN L F + GK +
Sbjct: 186 TAVINAYCKEGRMSDALRVLELMKLR---GCKPNVWTYNALVQGFCNEGK--------VH 234
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSY 293
L +M G+ PD + N +I+G + H+ A R+ M G++ + ++Y
Sbjct: 235 KAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI----ADQYTY 290
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LI+ LC GRT A L D ++ +G P++ ++NSL++ L +G+V+ K L +M+
Sbjct: 291 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVS 350
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D TY + ++ +C+ + E + + E+ K++
Sbjct: 351 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 388
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 17/233 (7%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL--FTAFLSRGKNTYINH 232
+Y ++ +A + + + + MK L RPS R+Y + F + + K
Sbjct: 114 MYAALVKGLCKAGRGEEGLLMLRRMKE---LGWRPSTRAYAAVVDFRCWERKAKEA---- 166
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ ++M G+ P + + ++I Y ++DALR+ M + PN ++
Sbjct: 167 ------EEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK-LRGCKPNVWT 219
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ L+ G C +G+ A L ++M+ G P + +YN L+ ++G +E + L M
Sbjct: 220 YNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 279
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D TY +++ +C+ GR +A L L+ + + + T+ L++ L
Sbjct: 280 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 332
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 16/212 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I L+ A+ M S RP ++N L + + +
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLMVRS---GWRPDAYTFNSLIVGYCRTNQ--------V 62
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R LF +M G D+ S ++I+G+ + +++A+ +F +M P+ Y
Sbjct: 63 DVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ-----PDMHMYAA 117
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC GR + + MK G+ PS+++Y ++V + +E + L EM EK
Sbjct: 118 LVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKG 177
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+T V++ C+ GR +A+++L+ ++
Sbjct: 178 LAPCVVTCTAVINAYCKEGRMSDALRVLELMK 209
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 10/191 (5%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN L A G+ + LF + GI+P+ + NS+I G S V+
Sbjct: 289 TYNALINALCKDGRT--------DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDI 340
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A + +M V P++++Y I LC ++ EM +K PS+ +Y ++
Sbjct: 341 AWKFLEKM-VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 399
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNL 391
L + EM+ D +TY T + C GR EA +L E+ +N
Sbjct: 400 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 459
Query: 392 IDGYTYTKLLD 402
+D Y L+D
Sbjct: 460 VDTMAYNTLMD 470
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 99/227 (43%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + + +A +F ++ +R + +P+ ++N L GK +
Sbjct: 290 YNALINALCKDGRTDQACSLFDSLE-TRGI--KPNAVTFNSLINGLCKSGK--------V 338
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ ++MV+ G PD ++ +S I+ + L +M + + P++ +Y
Sbjct: 339 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEM-LQKDVKPSTVNYTI 397
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+IH L + EM G P +Y + + A + G + E L EM +
Sbjct: 398 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 457
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN-KNLIDGYTYTKLL 401
VD + Y T++D G+ A+ +LK++ + ++ + +TY LL
Sbjct: 458 VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 504
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 68/361 (18%), Positives = 117/361 (32%), Gaps = 105/361 (29%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY L K QE + +ML PS Y +I+ + R
Sbjct: 356 DTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN----YTIVIHKLLKERNYGLV 411
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ M +S C P + +Y A+ G+ +V ME M +G+
Sbjct: 412 ARTWGEMVSS---GCNPDVVTYTTSMRAYCIEGRLNEAENVLME--------MSKNGVTV 460
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN--------------------------- 285
D + N+++ G+ + A+ I QM V +
Sbjct: 461 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 520
Query: 286 ------------------------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMK---- 317
+LPNS +Y ++ G GRT+ A L MK
Sbjct: 521 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 580
Query: 318 -------------------------------RKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ GF+P SY L+S L G+ ++ +
Sbjct: 581 SLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKE 640
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVLE 405
K D I ++ ++D + ++G + + +++ L+ N + TY L + L
Sbjct: 641 IFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELP 700
Query: 406 D 406
D
Sbjct: 701 D 701
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%)
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ +I LC + +A M R G+ P + ++NSL+ +V+ +M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ D ++Y +++ C GR EA++L E+ ++
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDM 112
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 110/233 (47%), Gaps = 15/233 (6%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
L N +I +A+K+ A V + M + P + +YNIL K ++ +
Sbjct: 294 LCNAVIDMLCKAKKVDDAHKVLEEMSK---IGAVPDVVTYNILLDGLC---KTNLVDKAH 347
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
LF MV++G PDI S + ++ G +N V+DA +F +M + +P+ +++
Sbjct: 348 E-----LFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM-IERKLVPDVVTFN 401
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GLC G+ A++L D M +P + +L+ L + +E V+ M+EK
Sbjct: 402 ILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK 461
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN---LIDGYTYTKLLDVL 404
D + + VL +CR G+ +A+ K + + D TYT L++ L
Sbjct: 462 GTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNAL 514
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 17/229 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+I+ A + A +FK M +S C P+ +Y+I+ + G
Sbjct: 225 YNSILLGLARKSNMDEAEEMFKKMVDSG---CAPNGATYSIVLSGHCRVGN--------- 272
Query: 236 ETIRCL--FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
RCL +++M PD+ N++I + V+DA ++ +M + +P+ +Y
Sbjct: 273 -MARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKI-GAVPDVVTY 330
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L+ GLC A EL M G P SY+ +++ L +V + MIE
Sbjct: 331 NILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIE 390
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
++ D +T+ ++D +C+ G+ EA LL + N++ DG T T L+
Sbjct: 391 RKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLM 439
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 15/232 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTI+ K+S A F M SR P + +YN L A GK +
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMP-SRGYS--PDVVAYNGLLDALYKEGK--------V 166
Query: 236 ETIRCLFK--QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
LFK M + + PD+ + N++I G+ ++A+++F + + Y+P++ +Y
Sbjct: 167 AEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDV-IAKGYMPDTVTY 225
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ ++ GL + A E+ +M G P+ +Y+ ++S G + ++ EM E
Sbjct: 226 NSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTE 285
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
K+ D + V+D +C+ + +A K+L+E+ + D TY LLD L
Sbjct: 286 KRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGL 337
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 13/255 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +TY I+ +L A E D++ ++M+ T A YN +I + + RA +
Sbjct: 44 DVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVA-YNALINGLCKDENIERAYKL 102
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M S+ E P +YN + + GK + + F M + G PD+
Sbjct: 103 LEEMA-SKGYE--PDNITYNTILSGLCRMGK--------VSEAKQFFDSMPSRGYSPDVV 151
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N ++ V +A +F M + + P+ +Y+ LI G C +T A +L
Sbjct: 152 AYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFK 211
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
++ KG++P + +YNS++ LA ++E + +M++ + TY VL CR G
Sbjct: 212 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVG 271
Query: 375 RAGEAMKLLKELQNK 389
++L +E+ K
Sbjct: 272 NMARCLELYEEMTEK 286
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 47/232 (20%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
P + +Y+ + + GK T E + + ++M G+ PD+ + ++ +
Sbjct: 7 EPDVVTYSTIISGLCKTGKVT-------EALE-MVEEMTEKGVNPDVATYTIIVDRLCRA 58
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V++A +FH+M + N+ +Y+ LI+GLC + A +L +EM KG+ P + +
Sbjct: 59 GKVDEADELFHKM-IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNIT 117
Query: 328 YNSLVSALALNGEVEET-------------------------------VKNLW------E 350
YN+++S L G+V E V W +
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLL 401
M +++ D ITY T++D CR + EAMKL K++ K + D TY +L
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSIL 229
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M G EPD+ + +++I G + V +AL + +M P+ +Y ++ LC G
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEM-TEKGVNPDVATYTIIVDRLCRAG 59
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ A EL +M +G ++ +YN+L++ L + +E K L EM K D ITY
Sbjct: 60 KVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYN 119
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
T+L +CR G+ EA + + ++ D Y LLD L
Sbjct: 120 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDAL 160
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 126/291 (43%), Gaps = 23/291 (7%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALY 176
CLEL+ +++ RF D + + L AK + V+ +M A P Y
Sbjct: 276 CLELYEEMTEK-RFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDV----VTY 330
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N ++ + + +A +F M ++ C P I SY+++ K +
Sbjct: 331 NILLDGLCKTNLVDKAHELFSTMVDNG---CAPDIVSYSVVLNGLCKTNK--------VH 379
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
R LF +M+ + PD+ + N ++ G + +++A + M +N LP+ + L
Sbjct: 380 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE-HNVLPDGVTCTTL 438
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI--EK 354
+HGLC RT A L M KG V +N +++ L G++ + + M+ +
Sbjct: 439 MHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDG 498
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT-YTKLLDVL 404
+ D +TY T+++ + GR +A+ +++ Y Y L++ L
Sbjct: 499 EFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGL 549
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 120/238 (50%), Gaps = 16/238 (6%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A++++++M L P+ +N ++ F + + A + + MK N
Sbjct: 273 ASRIFRDMQMDGELGLPKPNV----VTFNLMLKGFCQEGMMEEARSLVETMKKGGNF--- 325
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
S+ SYN L GK + R + +MV +GIEP+I+S N ++ G ++
Sbjct: 326 VSLESYNTWLLGLLRNGK--------LLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNH 377
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ DA R+ M V P++ +Y L+HG C++G+ A+ + +EM RKG P++ +
Sbjct: 378 MMLDARRLMDLM-VSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTC 436
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
N+L+++L G E + L +M EK +D +T V++ +CR G +A +++ E+
Sbjct: 437 NTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEM 494
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 19/244 (7%)
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC------ 207
Q+M+D +++ + + L ++ F + L RA VF+ + R+++
Sbjct: 232 QDMNDEAEKLVERMT---EKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGL 288
Query: 208 -RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
+P++ ++N++ F G ME R L + M G + S N+ + G +
Sbjct: 289 PKPNVVTFNLMLKGFCQEG--------MMEEARSLVETMKKGGNFVSLESYNTWLLGLLR 340
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ + + + +M V PN +SY+ ++ GLC +AR L D M G P +
Sbjct: 341 NGKLLEGRSVLDEM-VENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTV 399
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y +L+ G+V E L EMI K + T T+L+ + + GR EA ++L+++
Sbjct: 400 TYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKM 459
Query: 387 QNKN 390
K+
Sbjct: 460 NEKS 463
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD+ + ++I G + +A + F +M + N P+S +YD + C QG+ +A
Sbjct: 523 PDVITYTTLINGLCKVGKLEEAKKKFIEM-MAKNLHPDSVTYDTFVLNFCKQGKISSALR 581
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ +M+R G + ++YNSL+ L G++ E + EM E+ D TY +++ +C
Sbjct: 582 VLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLC 641
Query: 372 RRGRAGEAMKLLKELQNKNLI 392
G+ +A LL E+ +K ++
Sbjct: 642 EGGKTKDATSLLHEMLDKGVV 662
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 121/306 (39%), Gaps = 70/306 (22%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T+++M + M +E +V M +F E+ YNT + KL V
Sbjct: 295 TFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLES-YNTWLLGLLRNGKLLEGRSVLDE 353
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + P+I SYNI+ NH+ ++ R L MV++G+ PD +
Sbjct: 354 MVENG---IEPNIYSYNIVMDGLCR-------NHMMLDARR-LMDLMVSNGVYPDTVTYT 402
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL---------------------- 296
+++ GY V +A I ++M + PN+++ + L
Sbjct: 403 TLLHGYCSKGKVFEAKAILNEM-IRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNE 461
Query: 297 -------------IHGLCAQGRTKNARELCDEMKRKGF---------------------- 321
++GLC G + A E+ EM G
Sbjct: 462 KSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTN 521
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
VP +Y +L++ L G++EE K EM+ K D +TY T + C++G+ A++
Sbjct: 522 VPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALR 581
Query: 382 LLKELQ 387
+LK+++
Sbjct: 582 VLKDME 587
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 125/308 (40%), Gaps = 58/308 (18%)
Query: 114 QEDPLVCL--ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG 171
+E+P+ L + N ++ P D TY + L +E +M+A +
Sbjct: 504 KENPVAGLVNSIHNVSTNVP----DVITYTTLINGLCKVGKLEEAKKKFIEMMA-KNLHP 558
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
Y+T + F + K+S A+ V K M+ RN C ++++YN L S+G+ I
Sbjct: 559 DSVTYDTFVLNFCKQGKISSALRVLKDME--RN-GCSKTLQTYNSLILGLGSKGQ---IF 612
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLP 288
+Y L +M GI PDI + N+MI DA + H+M GVV P
Sbjct: 613 EMY-----GLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVS---P 664
Query: 289 NSFSYDYLIHGLC----------------------------------AQGRTKNARELCD 314
N S+ LI C A G+ +A+EL +
Sbjct: 665 NVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFE 724
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+ + + Y L+ L +G +++ L ++I+K D ++ V+D + +RG
Sbjct: 725 ASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRG 784
Query: 375 RAGEAMKL 382
+A +L
Sbjct: 785 NKQQADEL 792
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 22/188 (11%)
Query: 217 LFTAFLSRGKN--TYINHVYMETI---------RCLFKQMVNDGIEPDIFSLNSMIKGYI 265
L+T + G N TY ++ ++++ R LF +M G +P+ F++ +++G+
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197
Query: 266 LSNHVNDALR-IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ AL + +MG N + Y+ L+ C Q A +L + M KG +P
Sbjct: 198 RAGRTKQALEFVDGKMGGNVNRV----VYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPD 253
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEM-----IEKQRPVDFITYRTVLDEICRRGRAGEA 379
++NS +SAL G+V E + +M + +P + +T+ +L C+ G EA
Sbjct: 254 VVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKP-NVVTFNLMLKGFCQEGMMEEA 312
Query: 380 MKLLKELQ 387
L++ ++
Sbjct: 313 RSLVETMK 320
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P +++++ LI LC +AREL D+M KG P+ + LV G ++ +
Sbjct: 149 PETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQAL-- 206
Query: 348 LWEMIEKQRP--VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
E ++ + V+ + Y T++ C++ EA KL++ + K L+
Sbjct: 207 --EFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLL 251
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 147/343 (42%), Gaps = 41/343 (11%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDAS---TYHIMTRKLGAA 150
A+ L P + + +V+ + + + F WAS++ R R S +++ G
Sbjct: 50 ALEPLVPFLSKNIITSVIKEEVNRQLGFRFFIWASRRERLRSGESFGLVIDMLSEDNGCD 109
Query: 151 KMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
+Q ++++ + ++ S+C + +I +A+ +AV F MK +CRP
Sbjct: 110 LYWQTLEELKSGGVSVDSYC-----FCVLISAYAKMGLAEKAVESFGRMKE---FDCRPD 161
Query: 211 IRSYNILFTAFLSRGKNTYINH-VYMETIRC---------------------------LF 242
+ +YN++ + + VY E ++C +F
Sbjct: 162 VFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMF 221
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
M GI P+ + +I G DA ++F++M NY P+S +++ L+ G C
Sbjct: 222 DDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNY-PDSVAHNALLDGFCK 280
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
GR A EL ++ GFV + Y+SL+ L + + M+++ D I
Sbjct: 281 LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIIL 340
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
Y ++ + + G+ +A+KLL+ + +K + D Y Y ++ L
Sbjct: 341 YTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKAL 383
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 43/231 (18%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ +Y IL + RG E R LF +M G PD + N+++ G+
Sbjct: 231 PNRVTYTILISGLCQRGSP--------EDARKLFYEMKASGNYPDSVAHNALLDGFCKLG 282
Query: 269 HVNDA---LRIFHQMGVVY-------------------------------NYLPNSFSYD 294
+ +A LR+F + G V N P+ Y
Sbjct: 283 RMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYT 342
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GL G+ ++A +L M KG P + YN+++ AL G +EE EM E
Sbjct: 343 ILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSET 402
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
+ D T+ ++ +CR G +A ++ E++ T+ L+D L
Sbjct: 403 ESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGL 453
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 122/286 (42%), Gaps = 36/286 (12%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR-AVY 194
D Y+ + + L + +E + +M T SF +A +TI+ L R A
Sbjct: 372 DTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF--PDACTHTILICSMCRNGLVRKAEE 429
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRG--KNTYINHVYMETIR--CLFKQMVNDGI 250
+F ++ S C PS+ ++N L G K + ME R LF ++ + G
Sbjct: 430 IFLEIEKS---GCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGN 486
Query: 251 EPDIFSLNSMIK-GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
S ++M++ G IL + N L F G P+ SY+ LI+G C +G A
Sbjct: 487 R----SFDTMVQSGSILKAYKN--LAHFADTGNS----PDIVSYNVLINGFCREGDIDGA 536
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE-KQRPVDFITYRTVLD 368
+L + ++ KG P S +YN+L++ L G EE K + + + P YR+++
Sbjct: 537 LKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPA---VYRSLMT 593
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNSIRH 414
CRR + A L + Y K + L+D+ N I
Sbjct: 594 WSCRRRKLLVAFNLWMK-----------YLKKISCLDDETANEIEQ 628
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 129/326 (39%), Gaps = 62/326 (19%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL---GAAKMYQEMDDVVNQM 163
LC L+E + LE+ S+ F DA T+ I+ + G + +E+ + +
Sbjct: 383 LCGRGLLEEGRSLQLEM----SETESF-PDACTHTILICSMCRNGLVRKAEEIFLEIEKS 437
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
+PS A +N +I ++ +L A + M+ R LF
Sbjct: 438 GCSPSV----ATFNALIDGLCKSGELKEARLLLHKMEVGRPAS----------LFLRLAH 483
Query: 224 RGKNTYINHVYMETIRCLFKQMV---NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
G ++ V +I +K + + G PDI S N +I G+ ++ AL++ + +
Sbjct: 484 SGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVL 543
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS------- 333
+ P+S +Y+ LI+GL GR + A +L + F S Y SL++
Sbjct: 544 QL-KGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRRRK 600
Query: 334 -ALALN--------------------------GEVEETVKNLWEMIEKQRPVDFITYRTV 366
+A N GE E ++ L E+ ++ + Y
Sbjct: 601 LLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIW 660
Query: 367 LDEICRRGRAGEAMKLLKELQNKNLI 392
L +C+ GR EA+ + L+ K ++
Sbjct: 661 LIGLCQSGRFHEALMVFSVLREKKIL 686
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 130/271 (47%), Gaps = 22/271 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY+ + ++ D+ N+M+ P+ +N ++ F + R+L A
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNV----YTFNILVDGFCKERRLKEA 301
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V M +P + +YN L + + H+ F + G+ P
Sbjct: 302 KNVLAMMMKQG---IKPDVFTYNSLMDRYCLVKEVNKAKHI--------FNTISQRGVNP 350
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+I S + MI G+ V++A+ +F +M N +P+ +Y+ LI GLC G+ A +L
Sbjct: 351 NIHSYSIMIHGFCKIKKVDEAMNLFKEMHC-NNIIPDVVTYNSLIDGLCKLGKISYALKL 409
Query: 313 CDEMKRKGFVPSSK-SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
DEM +G VP K +YNS++ AL N +V++ + L +M ++ D TY T++D +C
Sbjct: 410 VDEMHDRG-VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLC 468
Query: 372 RRGRAGEAMKLLKELQNKN-LIDGYTYTKLL 401
+ GR +A + ++L K ++D YT ++
Sbjct: 469 KNGRLEDARIVFEDLLVKGYILDVNIYTAMI 499
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G EP++ +L ++IKG L ++ AL+ FH V + N SY LI+GLC G+T
Sbjct: 137 GYEPNVITLTTLIKGLCLKGQIHQALQ-FHDKVVALGFHLNKVSYGTLINGLCKVGQTSA 195
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L + K P+ YN+++ ++ V E EM+ K D +TY ++
Sbjct: 196 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALIS 255
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
C G+ +A L ++ +N+ + YT+ L+D
Sbjct: 256 GFCIVGKMKDATDLFNKMIFENINPNVYTFNILVD 290
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 110/235 (46%), Gaps = 19/235 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ + +++++A ++F + P+I SY+I+ F K +
Sbjct: 320 YNSLMDRYCLVKEVNKAKHIFNTISQRG---VNPNIHSYSIMIHGFCKIKK--------V 368
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ LFK+M + I PD+ + NS+I G ++ AL++ +M GV ++ +
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHD----KIT 424
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ ++ LC + A L +MK +G P +Y +LV L NG +E+ +++
Sbjct: 425 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLL 484
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
K +D Y ++ C G E++ LL +++ I + TY ++ L D
Sbjct: 485 VKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFD 539
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 106/219 (48%), Gaps = 18/219 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I+ F + +K+ A+ +FK M + + P + +YN L GK +Y
Sbjct: 355 YSIMIHGFCKIKKVDEAMNLFKEMHCNNII---PDVVTYNSLIDGLCKLGKISYALK--- 408
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
L +M + G+ D + NS++ ++ V+ A+ + +M G+ P+ +
Sbjct: 409 -----LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQ----PDICT 459
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y L+ GLC GR ++AR + +++ KG++ Y +++ +G +E++ L +M
Sbjct: 460 YTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKME 519
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
E + +TY ++ + + +A KLL+E+ + L
Sbjct: 520 ENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 35/186 (18%)
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYN---------------------- 285
+P IF ++ + SNH + + + QM G+ +
Sbjct: 69 KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128
Query: 286 ---------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
Y PN + LI GLC +G+ A + D++ GF + SY +L++ L
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGY 395
G+ ++ L + K + + Y T++D +C+ EA L E+ +K + D
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248
Query: 396 TYTKLL 401
TY L+
Sbjct: 249 TYNALI 254
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 27/254 (10%)
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVYVFKYMKN 201
+ R + A K+Y++MD C + +YN +I F + + S AV ++ M +
Sbjct: 452 VGRLVDAVKVYEKMDK---------DGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD 502
Query: 202 SRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMI 261
+ C P++ +YN L K Y E + ++MV +G PDI + S+I
Sbjct: 503 N---GCSPTVITYNTLIDGLCKAEK-------YQEA-SSVAREMVENGFTPDITTYGSLI 551
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMK-RK 319
+G ++DAL I+ Q ++Y L + ++ LIHGLC+ G+ A + +MK +K
Sbjct: 552 RGLFSDKKIDDALSIWKQ--ILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKK 609
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMI-EKQRPVDFITYRTVLDEICRRGRAGE 378
P+ +YN+L+ L G +++ LW I E D I+Y T + +C R E
Sbjct: 610 NCPPNLVTYNTLMDGLYETGYIDKAA-TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHE 668
Query: 379 AMKLLKELQNKNLI 392
++LL E+ ++ +I
Sbjct: 669 GIQLLDEVLSRGII 682
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 130/286 (45%), Gaps = 34/286 (11%)
Query: 133 FRHDASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
+ D TY I+ L GAA++Y E ++ L + A+YN+++ F +
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSE---IIKTGLVIDA-----AMYNSLVKGFCQ 346
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG---KNTYINHVYMETIRCLF 242
A ++ A +K+ ++ R ++R+YNI+ G + + + + + C+
Sbjct: 347 AGRVQEA---WKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACI- 401
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
PD + ++I G + N A IF + V L + FSY +I+GLC
Sbjct: 402 ---------PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQL-DVFSYSSMINGLCN 451
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
GR +A ++ ++M + G P+S YN+L+S + V+ +M + IT
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511
Query: 363 YRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVLEDD 407
Y T++D +C+ + EA + +E+ +N D TY L+ L D
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSD 557
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 123/311 (39%), Gaps = 38/311 (12%)
Query: 131 PRFRH----DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFF 183
PR RH S ++ A M D ++ A PS G +N ++ F
Sbjct: 73 PRLRHRPRFSESAALVVLSAFSRAIM---PDAALDAFRALPSILGCNPGIRSHNALLDAF 129
Query: 184 AEARKLSRAVYVFKYMKNSR-NLECRPSIRSYNILFTAFLSRG--------------KNT 228
AR+ S A F + + P++++YNI+ + +RG +
Sbjct: 130 VRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQV 189
Query: 229 YINHVYMETIRC-------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
+ + T+ C L +M G++PD+ N+++ G + +R
Sbjct: 190 APDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMR 249
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
++ ++ PN +Y+ ++ GLC GR K E+ + M P +Y L+ L
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY 395
+G+V+ + E+I+ +D Y +++ C+ GR EA K L +
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLR 369
Query: 396 TYTKLLDVLED 406
TY ++ L D
Sbjct: 370 TYNIMIKGLFD 380
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 124/271 (45%), Gaps = 20/271 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+IM + L + M E ++ + + + + T+I+ + ++A +F+
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+ S + + SY+ + + G+ VY ++M DG +P+ N
Sbjct: 430 ARVSGK---QLDVFSYSSMINGLCNVGRLVDAVKVY--------EKMDKDGCKPNSHIYN 478
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I G+ +DA+RI+ +M P +Y+ LI GLC + + A + EM
Sbjct: 479 ALISGFCQVYRTSDAVRIYSKMAD-NGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
GF P +Y SL+ L + ++++ + +++ K VD + + ++ +C G+ E
Sbjct: 538 NGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDE 597
Query: 379 AMKLLKELQNK-----NLIDGYTYTKLLDVL 404
A+ + +++ K NL+ TY L+D L
Sbjct: 598 ALHVFSDMKEKKNCPPNLV---TYNTLMDGL 625
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 58/241 (24%)
Query: 105 EELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML 164
+ LC QE V E+ + F D +TY + R L + K + + Q+L
Sbjct: 517 DGLCKAEKYQEASSVAREMV-----ENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571
Query: 165 ATPSFCGTEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+ G + ++N +I+ A K+ A++VF MK +N C P++ +YN L
Sbjct: 572 ----YKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKN--CPPNLVTYNTLMDGL 625
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
G Y++ L+ + DG+EPDI S N+
Sbjct: 626 YETG--------YIDKAATLWTSITEDGLEPDIISYNTR--------------------- 656
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
I GLC+ R +L DE+ +G +P+ ++N LV A+ G +
Sbjct: 657 ---------------IKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701
Query: 342 E 342
+
Sbjct: 702 Q 702
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 134/288 (46%), Gaps = 24/288 (8%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
LCN E+ L+ L +P R A+ R+ A + + + ++ + LA
Sbjct: 264 LCNA-ERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLA- 321
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
P A+ N + + ++S A+ V + MK C+P++ +YN L F + GK
Sbjct: 322 PCVVTCTAVINA----YCKEGRMSDALRVLELMKLR---GCKPNVWTYNALVQGFCNEGK 374
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV 283
+ L +M G+ PD + N +I+G + H+ A R+ M G++
Sbjct: 375 --------VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 426
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+ ++Y+ LI+ LC GRT A L D ++ +G P++ ++NSL++ L +G+ +
Sbjct: 427 AD----QYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 482
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
K L +M+ D TY + ++ +C+ + E + + E+ K++
Sbjct: 483 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 530
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 16/216 (7%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T YN +I L+RA+ M S RP ++N L + +
Sbjct: 152 TAPTYNAVIRSLCRRADLARALRYLSLMVRS---GWRPDAYTFNSLIVGYCRTNQ----- 203
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
++ R LF +M G D+ S ++I+G + +++A+ +F +M P+
Sbjct: 204 ---VDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ-----PDMH 255
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
Y L+ GLC R + + MK G+ PS+++Y ++V + +E + L EM
Sbjct: 256 MYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEM 315
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
EK +T V++ C+ GR +A+++L+ ++
Sbjct: 316 FEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 351
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 10/191 (5%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN L A G+ + LF + GI+P+ + NS+I G S +
Sbjct: 431 TYNALINALCKDGRT--------DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 482
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A + +M V P++++Y I LC ++ EM +K PS+ +Y ++
Sbjct: 483 AWKFLEKM-VSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 541
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNL 391
L + EM+ D +TY T + C GR EA +L E+ +N
Sbjct: 542 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVT 601
Query: 392 IDGYTYTKLLD 402
+D Y L+D
Sbjct: 602 VDTMAYNTLMD 612
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 100/227 (44%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + + +A +F ++ +R + +P+ ++N L GK I ++
Sbjct: 432 YNALINALCKDGRTDQACSLFDSLE-TRGI--KPNAVTFNSLINGLCKSGKAD-IAWKFL 487
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +MV+ G PD ++ +S I+ + L +M + + P++ +Y
Sbjct: 488 E-------KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEM-LQKDVKPSTVNYTI 539
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+IH L + EM G P +Y + + A + G + E L EM +
Sbjct: 540 VIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNG 599
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN-KNLIDGYTYTKLL 401
VD + Y T++D G+ A+ +LK++ + ++ + +TY LL
Sbjct: 600 VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILL 646
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
ALR+F M P + +Y+ +I LC + A M R G+ P + ++NSL+
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLI 195
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V+ +M + D ++Y T+++ +C GR EA++L E+ ++
Sbjct: 196 VGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDM 254
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 68/361 (18%), Positives = 117/361 (32%), Gaps = 105/361 (29%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY L K QE + +ML PS Y +I+ + R
Sbjct: 498 DTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN----YTIVIHKLLKERNYGLV 553
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ M +S C P + +Y A+ G+ +V ME M +G+
Sbjct: 554 ARTWGEMVSS---GCNPDVVTYTTSMRAYCIEGRLNEAENVLME--------MSKNGVTV 602
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN--------------------------- 285
D + N+++ G+ + A+ I QM V +
Sbjct: 603 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLT 662
Query: 286 ------------------------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMK---- 317
+LPNS +Y ++ G GRT+ A L MK
Sbjct: 663 PAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSI 722
Query: 318 -------------------------------RKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ GF+P SY L+S L G+ ++ +
Sbjct: 723 SLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKE 782
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVLE 405
K D I ++ ++D + ++G + + +++ L+ N + TY L + L
Sbjct: 783 IFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELP 842
Query: 406 D 406
D
Sbjct: 843 D 843
>gi|255660900|gb|ACU25619.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 481
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 134/298 (44%), Gaps = 13/298 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 TIRNLVPSFDHELVYNVLHSSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YNALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVVTYNTXINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V+ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 229 GYVSVDQVDXALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 286
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKZGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T ++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTXINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 112/237 (47%), Gaps = 14/237 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ L A+++ + M + L RP+ SY L A + +
Sbjct: 59 YNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVG--- 115
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L + M + G+ PD+ + ++I+G + V+ A+ + ++M PN Y
Sbjct: 116 -----LLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEM-CESGIEPNVVVYSC 169
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+HG C GR ++ ++ +EM +G P Y +L+ +L +G+V++ + + M E+
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERG 229
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTY----TKLLDVLEDD 407
+ +TY +++ +C+ G EA+ L K + K + D TY T L VLE D
Sbjct: 230 LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMD 286
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 25/268 (9%)
Query: 123 LFNWASKQPRF--RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE---ALYN 177
L S +PR R +A +Y + R L A + + ++ M CG Y
Sbjct: 78 LLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSM----QDCGVRPDVVTYG 133
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T+I +A + AV + M S P++ Y+ L + G+ E+
Sbjct: 134 TLIRGLCDAADVDTAVELLNEMCES---GIEPNVVVYSCLLHGYCKTGR--------WES 182
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ +F++M GIEPD+ ++I V A R+ M PN +Y+ LI
Sbjct: 183 VGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMM-TERGLEPNVVTYNVLI 241
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ-- 355
+ +C +G + A +L M KG P +YN+L++ L+ E++E + L EM++ +
Sbjct: 242 NSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETR 301
Query: 356 -RPVDFITYRTVLDEICRRGRAGEAMKL 382
RP D +T+ +V+ +C+ G +A+++
Sbjct: 302 VRP-DLMTFNSVIHGLCKIGWMRQALQV 328
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 12/211 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ R+ ++AV + + M++ RP + +Y L RG + +
Sbjct: 97 YTTLMRALCADRRAAQAVGLLRSMQDC---GVRPDVVTYGTLI-----RG---LCDAADV 145
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+T L +M GIEP++ + ++ GY + ++F +M P+ Y
Sbjct: 146 DTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSG-RGIEPDVVMYTA 204
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI LC G+ K A + D M +G P+ +YN L++++ G V E + M EK
Sbjct: 205 LIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKG 264
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D +TY T++ + EAM LL+E+
Sbjct: 265 VQPDVVTYNTLITGLSSVLEMDEAMALLEEM 295
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 106/263 (40%), Gaps = 47/263 (17%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+Y +I K+ +A V M R LE P++ +YN+L + G
Sbjct: 201 MYTALIDSLCRHGKVKKAARVMDMM-TERGLE--PNVVTYNVLINSMCKEGS-------V 250
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSY 293
E + L K M G++PD+ + N++I G +++A+ + +M + P+ ++
Sbjct: 251 REALD-LRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTF 309
Query: 294 DYLIHGLCAQG-----------------------------------RTKNARELCDEMKR 318
+ +IHGLC G + K A EL DEM
Sbjct: 310 NSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMAS 369
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G P S +Y+ L++ +VE L EM + + + Y +L +C +G G+
Sbjct: 370 SGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQ 429
Query: 379 AMKLLKELQNKNLIDGYTYTKLL 401
A L E+ +D Y+ ++
Sbjct: 430 ARDLFNEMDRNCKLDAAAYSTMI 452
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 99/224 (44%), Gaps = 12/224 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + ++ A+ + + M RP + ++N + G +M
Sbjct: 272 YNTLITGLSSVLEMDEAMALLEEMMQGET-RVRPDLMTFNSVIHGLCKIG--------WM 322
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ M +G ++ + N +I G + + V A+ + +M P+SF+Y
Sbjct: 323 RQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMAS-SGLQPDSFTYSI 381
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C + + A EM+ +G P Y L+ A+ G + + ++L+ +++
Sbjct: 382 LINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQA-RDLFNEMDRN 440
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYT 398
+D Y T++ + G A + LK++ ++ LI D TY+
Sbjct: 441 CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYS 484
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 95/236 (40%), Gaps = 21/236 (8%)
Query: 151 KMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
K + MD++ + L SF Y+ +I F + R++ RA Y+ R+ P
Sbjct: 359 KAMELMDEMASSGLQPDSFT-----YSILINGFCKMRQVERA---ESYLSEMRHQGMEPE 410
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
Y L A +G M R LF +M + + D + ++MI G S
Sbjct: 411 PVHYIPLLKAMCDQG--------MMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEK 461
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
A M + +P++ +Y I+ G A + +M GFVP ++S
Sbjct: 462 KIAEEFLKDM-IDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDS 520
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L+ G+ E+ ++ EM K +D T++ + G + E KLL+ L
Sbjct: 521 LIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL---GASIEGQKLLQSL 573
>gi|242038361|ref|XP_002466575.1| hypothetical protein SORBIDRAFT_01g010260 [Sorghum bicolor]
gi|241920429|gb|EER93573.1| hypothetical protein SORBIDRAFT_01g010260 [Sorghum bicolor]
Length = 771
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 13/231 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LYN I+ F + R+L ++ +F MK + P I +YN + A + +
Sbjct: 227 LYNICIHAFGKWRQLGMSLRLFAAMKAATP-PVSPDICTYNSVIRALVVGAR-------- 277
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+ +F +M + GIEPD+F+ +++ G S ++DALR+F +M + Y+
Sbjct: 278 VPDALVIFDEMKSSGIEPDVFTYRAVMNGCCKSFRMDDALRVFQEMRGSSGVKSDVVVYN 337
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GL + A + M G S+ ++N+L+ L NG E + +E+ K
Sbjct: 338 SLLDGLFKAKKLDEACGFFETMVADGIQCSASTHNTLIDGLFKNGRAEAACRLFYELRRK 397
Query: 355 QRPVDFITYRTVLDEICRRG---RAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ +D I Y ++ E C+ G + EA++L+KE++ + +D T T LL
Sbjct: 398 GQLLDGIAYSIMVREFCKEGMGDQVAEAVELVKEMEQQGFSVDLVTITSLL 448
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 215 NILFTAFLSRGKNTYINHVYMETIRC-LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
N + FL++GK ++ C LF+ N G + ++ NS++ ++ ++
Sbjct: 579 NTYLSIFLAKGK---------LSVACKLFEIFTNLGNKGTSYTYNSLMTSFVKKGYLKQV 629
Query: 274 LRIFHQMGVVYNYLPNSFS-YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
I H+ G PN + Y+ +I GL G+ + A + D + +KG YN+L+
Sbjct: 630 WAILHERG--GQLCPNDVATYNLIIQGLGQMGKAEVASTIIDRLSKKGVYMDIVMYNTLI 687
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ L G+VEE ++I D +T+ T+++ + GR EA K L+ + + +
Sbjct: 688 NQLGKVGKVEEAGCLFEQIIRSGMKPDVVTFNTLININAKAGRLKEADKYLRRMITEGIA 747
Query: 393 DGYTYTKLLDVLEDDFGNSIRHH 415
Y +L L+ + + H
Sbjct: 748 PNYATETILIFLDKEIEKRRKQH 770
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 27/254 (10%)
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVYVFKYMKN 201
+ R + A K+Y++MD C + +YN +I F + + S AV ++ M +
Sbjct: 452 VGRLVDAVKVYEKMDK---------DGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD 502
Query: 202 SRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMI 261
+ C P++ +YN L K Y E + ++MV +G PDI + S+I
Sbjct: 503 N---GCSPTVITYNTLIDGLCKAEK-------YQEA-SSVAREMVENGFTPDITTYGSLI 551
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMK-RK 319
+G ++DAL I+ Q ++Y L + ++ LIHGLC+ G+ A + +MK +K
Sbjct: 552 RGLFSDKKIDDALSIWKQ--ILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKK 609
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMI-EKQRPVDFITYRTVLDEICRRGRAGE 378
P+ +YN+L+ L G +++ LW I E D I+Y T + +C R E
Sbjct: 610 NCPPNLVTYNTLMDGLYETGYIDKAA-TLWTSITEDGLEPDIISYNTRIKGLCSCDRIHE 668
Query: 379 AMKLLKELQNKNLI 392
++LL E+ ++ +I
Sbjct: 669 GIQLLDEVLSRGII 682
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 130/286 (45%), Gaps = 34/286 (11%)
Query: 133 FRHDASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
+ D TY I+ L GAA++Y E ++ L + A+YN+++ F +
Sbjct: 295 LQPDVITYGILIHGLCRSGDVDGAARVYSE---IIKTGLVIDA-----AMYNSLVKGFCQ 346
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG---KNTYINHVYMETIRCLF 242
A ++ A +K+ ++ R ++R+YNI+ G + + + + + C+
Sbjct: 347 AGRVQEA---WKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACI- 401
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
PD + ++I G + N A IF + V L + FSY +I+GLC
Sbjct: 402 ---------PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQL-DVFSYSSMINGLCN 451
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
GR +A ++ ++M + G P+S YN+L+S + V+ +M + IT
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511
Query: 363 YRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVLEDD 407
Y T++D +C+ + EA + +E+ +N D TY L+ L D
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSD 557
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 124/271 (45%), Gaps = 20/271 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+IM + L + M E ++ + + + + T+I+ + ++A +F+
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+ S + + SY+ + + G+ VY ++M DG +P+ N
Sbjct: 430 ARVSGK---QLDVFSYSSMINGLCNVGRLVDAVKVY--------EKMDKDGCKPNSHIYN 478
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I G+ +DA+RI+ +M P +Y+ LI GLC + + A + EM
Sbjct: 479 ALISGFCQVYRTSDAVRIYSKMAD-NGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE 537
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
GF P +Y SL+ L + ++++ + +++ K VD + + ++ +C G+ E
Sbjct: 538 NGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDE 597
Query: 379 AMKLLKELQNK-----NLIDGYTYTKLLDVL 404
A+ + +++ K NL+ TY L+D L
Sbjct: 598 ALHVFSDMKEKKNCPPNLV---TYNTLMDGL 625
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 113/281 (40%), Gaps = 31/281 (11%)
Query: 157 DDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSR-NLECRPSIR 212
D ++ A PS G +N ++ F AR+ S A F + + P+++
Sbjct: 100 DAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQ 159
Query: 213 SYNILFTAFLSRG--------------KNTYINHVYMETIRC-------------LFKQM 245
+YNI+ + +RG + + + T+ C L +M
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEM 219
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
++PD+ N+++ G + +R++ ++ PN +Y+ ++ GLC GR
Sbjct: 220 PRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGR 279
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
K E+ + M P +Y L+ L +G+V+ + E+I+ +D Y +
Sbjct: 280 FKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNS 339
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLED 406
++ C+ GR EA K L + TY ++ L D
Sbjct: 340 LVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFD 380
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 96/241 (39%), Gaps = 58/241 (24%)
Query: 105 EELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML 164
+ LC QE V E+ + F D +TY + R L + K + + Q+L
Sbjct: 517 DGLCKAEKYQEASSVAREMV-----ENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571
Query: 165 ATPSFCGTEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+ G + ++N +I+ A K+ A++VF MK +N C P++ +YN L
Sbjct: 572 ----YKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKN--CPPNLVTYNTLMDGL 625
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
G Y++ L+ + DG+EPDI S N+
Sbjct: 626 YETG--------YIDKAATLWTSITEDGLEPDIISYNTR--------------------- 656
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
I GLC+ R +L DE+ +G +P+ ++N LV A+ G +
Sbjct: 657 ---------------IKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701
Query: 342 E 342
+
Sbjct: 702 Q 702
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 153 YQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
Y+ MDD +N + + T Y+++I + S A + M + P
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---INPD 325
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ +++ L AF+ GK +Y E MV I+P I + +S+I G+ + + +
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDE--------MVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
++A ++F M V + P+ +Y+ LI G C R + E+ EM ++G V ++ +YN
Sbjct: 378 DEAKQMFEFM-VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ L G+ + + EM+ P + +TY T+LD +C+ G+ +AM + + LQ
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 391 LIDG-YTYTKLLD 402
+ YTY +++
Sbjct: 497 MEPTIYTYNIMIE 509
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 32/245 (13%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---------LSRG---KNTYINH--- 232
KL AV +F M SR PSI ++ L +A +S G +N I H
Sbjct: 61 KLDDAVALFGEMVKSRPF---PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 233 VYMETIRC------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
Y I C + +M+ G EP+I +L+S++ GY S +++A+ + QM
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
V Y PN+ +++ LIHGL + A L D M KG P +Y +V+ L G+
Sbjct: 178 -FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
+ L +M + + + Y T++D +C+ +A+ L KE++ K + + TY+
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 400 LLDVL 404
L+ L
Sbjct: 297 LISCL 301
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F + +++ + VF+ M + R L + +YNIL G +
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREM-SQRGL--VGNTVTYNILIQGLFQAGDCDMAQEI-- 453
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL------PN 289
FK+MV+DG+ P+I + N+++ G + + A+ VV+ YL P
Sbjct: 454 ------FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM-------VVFEYLQRSKMEPT 500
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
++Y+ +I G+C G+ ++ +L + KG P +YN+++S G EE
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
EM E + Y T++ R G + +L+KE+++
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 46/262 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I F +L A+ V M L P+I + + L N Y + +
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKM---MKLGYEPNIVTLSSLL--------NGYCHSKRI 167
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------------GVV 283
L QM G +P+ + N++I G L N ++A+ + +M GVV
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 227
Query: 284 YNYL----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
N L P Y+ +I GLC +A L EM+ KG
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P+ +Y+SL+S L G + + L +MIE++ D T+ ++D + G+ EA K
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 382 LLKELQNKNLIDG-YTYTKLLD 402
L E+ +++ TY+ L++
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLIN 369
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKL---GAAKMYQEMDDVVNQMLA--TPSFCGTEAL 175
+E+F S Q + TY+I+ + L G M QE + +M++ P T
Sbjct: 416 MEVFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQE---IFKEMVSDGVPPNIMT--- 468
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + KL +A+ VF+Y++ S+ P+I +YNI+ GK +
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSK---MEPTIYTYNIMIEGMCKAGK--------V 517
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF + G++PD+ + N+MI G+ +A +F +M LPNS Y+
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYNT 576
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
LI G + + EL EM+ GF + + LV+ + +G ++++
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS 624
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 48/323 (14%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
EDP L LF+ ++ FRHD +Y + KL ++ + +D ++ + C E+
Sbjct: 60 EDPEEALSLFH-QYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRC-RES 117
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
L+ +I + +A + +A+ VF + + +C +I+S N L + G+
Sbjct: 118 LFMGLIQHYGKAGSVDKAIDVFHKITS---FDCVRTIQSLNTLINVLVDNGE-------- 166
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNY 286
+E + F + + P+ S N +IKG++ A ++F +M V YN
Sbjct: 167 LEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNS 226
Query: 287 L--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
L PN+ ++ L+ GLC +G A++L +M+ +G
Sbjct: 227 LIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRG 286
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P +Y L+S L G ++E L EM +++ D + Y +++ +C R EA
Sbjct: 287 CKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAY 346
Query: 381 KLLKELQNKNL-IDGYTYTKLLD 402
++L E+Q K + TY ++D
Sbjct: 347 RVLTEMQMKGCKPNAATYRMMID 369
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 69/165 (41%), Gaps = 9/165 (5%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C+P + +Y IL + RG+ ++ + L +M I+PD+ N ++
Sbjct: 287 CKPGLVNYGILMSDLGKRGR--------IDEAKLLLGEMKKRRIKPDVVIYNILVNHLCT 338
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V +A R+ +M + PN+ +Y +I G C + + + M P+
Sbjct: 339 ECRVPEAYRVLTEMQM-KGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPA 397
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
++ +V+ L G ++ L M +K ++ +L ++C
Sbjct: 398 TFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 156/347 (44%), Gaps = 67/347 (19%)
Query: 109 NVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPS 168
+++ ++DP L +FN S+Q F+H+ +TY + KL + +D V++QM T
Sbjct: 98 DLIKREKDPQHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQM--TYE 155
Query: 169 FCG-TEALYNTIIYFFAEA---RKLSRAVYVFK--------------------------- 197
C E ++ ++ F+++ KL A + +
Sbjct: 156 TCKFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSNRVDL 215
Query: 198 ----YMKNSRNLECRPSIRSYNILF----------TAF-----LSRGKNTYINHVYMETI 238
+ R+L +P++ +NIL +AF + + +Y N V T+
Sbjct: 216 ARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTL 275
Query: 239 R---C----------LFKQMVN-DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
C LF++MV+ D I PD + N +I G+ + A + M
Sbjct: 276 MDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNG 335
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
Y PN ++Y L+ GLC G+ ++A+ + E+K G P + +Y SL++ L NG+ +E
Sbjct: 336 CY-PNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEA 394
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
++ L EM E D +T+ +L +CR G+ EA+ ++++L + +
Sbjct: 395 IELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGV 441
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 47/283 (16%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + L +E D+ +M++ YN +I F K RA V ++
Sbjct: 271 TYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQF 330
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
MK++ C P++ +Y+ L GK +E + + ++ G++PD +
Sbjct: 331 MKSN---GCYPNVYNYSALVDGLCKVGK--------LEDAKGVLAEIKGSGLKPDAVTYT 379
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR------------- 305
S+I + ++A+ + +M +S +++ L+ GLC +G+
Sbjct: 380 SLINFLCRNGKSDEAIELLEEMKE-NGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQ 438
Query: 306 ----------------------TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
K A+EL M R+GF P + N L+ L G V++
Sbjct: 439 QGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDD 498
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L++++E T+ ++ ICR + +LL EL
Sbjct: 499 AAVALFDLVEMGFQPGLETWEVLIGLICRERKLLYVFELLDEL 541
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 117/247 (47%), Gaps = 20/247 (8%)
Query: 140 YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYM 199
YH L +A ++ ++++ N + P+ Y+T++ ++ A +F+ M
Sbjct: 242 YHCKNGDLDSA--FEIVEEMRNSEFSYPNL----VTYSTLMDGLCRNGRVKEAFDLFEEM 295
Query: 200 KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNS 259
+ ++ P +YN+L F GK + R + + M ++G P++++ ++
Sbjct: 296 VSRDHI--VPDPLTYNVLINGFCRGGKP--------DRARNVIQFMKSNGCYPNVYNYSA 345
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
++ G + DA + ++ P++ +Y LI+ LC G++ A EL +EMK
Sbjct: 346 LVDGLCKVGKLEDAKGVLAEIKG-SGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKEN 404
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI---CRRGRA 376
G S ++N L+ L G+ EE + + ++ ++ ++ +YR VL+ + C RA
Sbjct: 405 GCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRA 464
Query: 377 GEAMKLL 383
E + L+
Sbjct: 465 KELLGLM 471
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR--PSIRSYNILFTAFLSRGKNTYINH 232
L+N+++ ++R S+A + R LE R P + +YN L + R K+T
Sbjct: 165 LFNSLLDALGKSRHASKAASLV------RALERRFPPDVVTYNTLADGW-CRAKDT---- 213
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM----GVVYNYLP 288
L +QM G+ P + N ++KG+ + + A F QM + P
Sbjct: 214 ---SRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKP 270
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ SY +IHGL G+ AR+L DEM ++G PS +YN+L+ + G VE+ V
Sbjct: 271 DIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVF 330
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+M+ K + +TY ++ +C G+ AMKL++ ++ +
Sbjct: 331 DDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEG 372
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 12/216 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
RF D TY+ + AK D++ QM A T+ YN I+ F A ++
Sbjct: 192 RFPPDVVTYNTLADGWCRAKDTSRALDLLRQM-AESGVTPTKTTYNIILKGFFRAGQIQH 250
Query: 192 AVYVFKYMK--NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A F MK +++ C+P I SY + G+ ++ R LF +M +G
Sbjct: 251 AWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQ--------LDKARKLFDEMSKEG 302
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
P + + N++I+ +V DA+ +F M V +Y+PN +Y LI GLC G+ A
Sbjct: 303 CTPSVATYNALIQVICKKGNVEDAVTVFDDM-VRKDYMPNVVTYTVLIRGLCHVGKIDRA 361
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+L + MK +G P ++YN L+ GE+E+ +
Sbjct: 362 MKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKAL 397
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 16/141 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I K+ RA+ + + MK C P +++YN+L G+ +
Sbjct: 345 YTVLIRGLCHVGKIDRAMKLMERMKGE---GCEPVVQTYNVLIRYSFEEGE--------I 393
Query: 236 ETIRCLFKQMV-NDGIEPDIFSLNSMIKGYILSNHVND---ALRIFHQMGVVYNYLPNSF 291
E CLF++M + P+ + N +I + D A R+ +M V YLP F
Sbjct: 394 EKALCLFERMSKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEM-VERGYLPRRF 452
Query: 292 SYDYLIHGLCAQGRTKNAREL 312
+ +++GL G + +R+L
Sbjct: 453 MLNRVLNGLMLTGNQQISRDL 473
>gi|56201849|dbj|BAD73299.1| fertility restorer B-like [Oryza sativa Japonica Group]
gi|56202086|dbj|BAD73615.1| fertility restorer B-like [Oryza sativa Japonica Group]
Length = 647
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 128/293 (43%), Gaps = 21/293 (7%)
Query: 96 SELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE 155
EL P F + L + PL L LF A H A +Y + L A
Sbjct: 198 GELEPPFLS--LLRAYSRAHQPLAALHLFRSAPSALGLPHSARSYTAVLAALVAHSHLSL 255
Query: 156 MDDVVNQMLATPSFCGTEALYNTII--YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M A F T A YN ++ + A + AV VF RN+ +P S
Sbjct: 256 ARSLLADMRAA-GFAPTTATYNVLVKAHCSDAAVPIDDAVRVF------RNIP-KPDACS 307
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
YN + RG+ + R LF +M+ +G P + + ++I +DA
Sbjct: 308 YNTVIDGLCRRGR--------LPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDA 359
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
L++F +M +PN +Y LI GLC GR +A EL D M ++ +P++ +Y+S++
Sbjct: 360 LKLFDEMAR-RGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVID 418
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
L G + + ++ L M + R D + ++ +C GRA EA L E+
Sbjct: 419 GLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEM 471
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 52/258 (20%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
PS E + +++ ++ A + A+++F+ ++ L S RSY + A
Sbjct: 195 PSPGELEPPFLSLLRAYSRAHQPLAALHLFRSAPSALGLPH--SARSYTAVLAAL----- 247
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI--LSNHVNDALRIFHQMGVVY 284
+ H ++ R L M G P + N ++K + + ++DA+R+F +
Sbjct: 248 ---VAHSHLSLARSLLADMRAAGFAPTTATYNVLVKAHCSDAAVPIDDAVRVFRNIPK-- 302
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNAREL---------------------------C---- 313
P++ SY+ +I GLC +GR AR+L C
Sbjct: 303 ---PDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREACFDDA 359
Query: 314 ----DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
DEM R+G +P+ +Y+SL+ L G V+ L M+++++ + ITY +V+D
Sbjct: 360 LKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSSVIDG 419
Query: 370 ICRRGRAGEAMKLLKELQ 387
+C+ G G+AM++L ++
Sbjct: 420 LCKEGCLGQAMEILDRMR 437
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 140/334 (41%), Gaps = 42/334 (12%)
Query: 82 SKPALDDT---QFRCAVSELPPRFNNEELCNV------MTLQEDPLVCLELFNWASKQPR 132
SKP+ DD R + + P ++ L + + L+ DP L+ F A +
Sbjct: 64 SKPSFDDIASESMRSFLQQDGPHLSDSALAPIWVSKALVKLKGDPKSALKFFKEAGARAG 123
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQ-MLATPSFCGTEALYNTIIYFFAEARKLSR 191
FRH A +Y ++ L Y + V+ + +L F G +
Sbjct: 124 FRHAAESYCVLAHILFCGMFYLDARSVIKEWILLGREFPGCD------------------ 165
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
F + ++RN+ CRP ++ LF + G +E R F +M +
Sbjct: 166 ---FFDMLWSTRNV-CRPGFGVFDTLFNVLVDLG--------MLEEARQCFWKMNKFRVL 213
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + S N ++ S+ AL F M VV P+ F+Y+ +I L +G + AR
Sbjct: 214 PKVRSCNELLHRLSKSSKGGLALSFFKDM-VVAGLSPSVFTYNMVIGCLAREGDLEAARS 272
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L +EMK KG P +YNSL+ G + V EM + D ITY ++++ C
Sbjct: 273 LFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFC 332
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ R +A + L ++ + L + TY+ L+D
Sbjct: 333 KFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAF 366
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 127/279 (45%), Gaps = 22/279 (7%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEAR 187
K R D TY+ + G M V +M + C + + YN++I F +
Sbjct: 278 KAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEM--KDAGCEPDVITYNSLINCFCKFE 335
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
++ +A F+Y+ + +P++ +Y+ L AF G N +++ IR
Sbjct: 336 RIPQA---FEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRV------- 385
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRI---FHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
G++P+ F+ S+I +N+A ++ Q GV N + +Y L+ GLC G
Sbjct: 386 -GLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIV----TYTALLDGLCEDG 440
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R + A EL + + G+ + + Y SL +E+ + L EM +K D + Y
Sbjct: 441 RMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYG 500
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
T + +CR+ ++M +++E+ + L + Y YT L+D
Sbjct: 501 TKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLID 539
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 108/234 (46%), Gaps = 21/234 (8%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+ +Y ++ + + +A+ + +A+ + + M N +NL +P + Y + +
Sbjct: 461 QQIYTSLFHGYIKAKMMEKAMDILEEM-NKKNL--KPDLLLYGTKIWGLCRQNE------ 511
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPN 289
+E + ++M++ G+ + + ++I Y +A+ + +M G+ +
Sbjct: 512 --IEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVV-- 567
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+Y LI GLC G + A D M R G P+ Y +L+ L N +EE KNL+
Sbjct: 568 --TYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEA-KNLF 624
Query: 350 -EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
EM++K D + Y +++D + G GEA+ L + + +D YT L+
Sbjct: 625 NEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLI 678
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 19/246 (7%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
AKM ++ D++ +M + LY T I+ ++ ++ V + M ++C
Sbjct: 474 AKMMEKAMDILEEM-NKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREM-----MDCGL 527
Query: 210 SIRSY--NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+ SY L A+ GK T E + L ++M + GI+ + + +I G
Sbjct: 528 TANSYIYTTLIDAYFKVGKTT-------EAVN-LLQEMQDLGIKITVVTYGVLIDGLCKI 579
Query: 268 NHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V A+R F M N L PN Y LI GLC + A+ L +EM KG P
Sbjct: 580 GLVQQAVRYFDHM--TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKL 637
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
Y SL+ +G E + M+E +D Y +++ R G+ A LL E+
Sbjct: 638 VYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEM 697
Query: 387 QNKNLI 392
K +I
Sbjct: 698 LRKGII 703
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 15/228 (6%)
Query: 170 CGTEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
CG A +Y T+I + + K + AV + + M++ L + ++ +Y +L G
Sbjct: 525 CGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQD---LGIKITVVTYGVLIDGLCKIG- 580
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
+ + +R F M +G++P+I ++I G ++ + +A +F++M +
Sbjct: 581 ------LVQQAVR-YFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEM-LDKGI 632
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
P+ Y LI G G A L + M G +Y SL+ + G+V+
Sbjct: 633 SPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKS 692
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
L EM+ K D + +L + G EA+ L ++ + LI G
Sbjct: 693 LLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISG 740
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 13/253 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + L E ++V++QM + YNT+I F RKL +A+ + +
Sbjct: 305 TYNTLIGGLCREMKANEANEVMDQM-KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRD 363
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+K SR L PS+ +YNIL + F +G + V K+M GI+P +
Sbjct: 364 LK-SRGLS--PSLVTYNILVSGFCKKGDTSGAGKV--------VKEMEERGIKPSKVTYT 412
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+I + S+++ A+++ M + P+ +Y LIHG C +GR A L M
Sbjct: 413 ILIDTFARSDNMEKAIQLRSSMEEL-GLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVE 471
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
K F P+ YN++V G ++ EM EK+ P + +YR +++ +C+ ++ E
Sbjct: 472 KKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKE 531
Query: 379 AMKLLKELQNKNL 391
A L++++ + +
Sbjct: 532 AEGLVEKMIDSGI 544
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 37/258 (14%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT------------AFL 222
LY II + +++ L ++Y F M + + P +N L T F
Sbjct: 96 LYEVIINAYVQSQSLDSSIYYFNEMVDKGFV---PGSNCFNNLLTFVVGSSSFNQWWCFF 152
Query: 223 SRGKNTYINHVY--------------METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ K + VY +E L ++ G P++ ++I G
Sbjct: 153 NESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKG 212
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A +F +MG + + N ++Y LIHGL G K E+ ++M+ G P+ +Y
Sbjct: 213 EIEKAKDLFFEMGK-FGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTY 271
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ- 387
N +++ L +G ++ K EM E+ + +TY T++ +CR +A EA +++ +++
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKS 331
Query: 388 ---NKNLIDGYTYTKLLD 402
N NLI TY L+D
Sbjct: 332 DGINPNLI---TYNTLID 346
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ +I EA ++ ++ F + R P++ Y L +G+ +
Sbjct: 166 FGIVIKGCCEAGEIEKS---FDLLVELREFGFSPNVVIYTTLIDGCCKKGE--------I 214
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + LF +M G+ + ++ +I G + ++ +M + PN +Y+
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQE-HGVFPNLHTYNC 273
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+++ LC GRTK+A ++ DEM+ +G + +YN+L+ L + E + + +M
Sbjct: 274 VMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDG 333
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ ITY T++D C + G+A+ L ++L+++ L
Sbjct: 334 INPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGL 369
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 14/218 (6%)
Query: 205 LECR--PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
LEC S+ +NIL F G + + +F + G+ P + S N+++
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGD--------IRVAQSVFDAITKWGLRPXVXSYNTLMN 185
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
GYI +++ R+ M P+ ++Y LI+GL + + EL DEM KG V
Sbjct: 186 GYIRLGXLDEGFRLKSAM-XASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLV 244
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P+S ++ +L+ NG V+ ++ +M+ + DFITY T+ +C++G +A L
Sbjct: 245 PNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGL 304
Query: 383 LKELQNKNL-IDGYTYTKLLD--VLEDDFGNSIRHHLR 417
+ E+ K L D +TYT L+D E D + H R
Sbjct: 305 IDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKR 342
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 100/196 (51%), Gaps = 10/196 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + +Y++L N M+ LF +M+ G+ P+ + ++I G+ +
Sbjct: 209 QPDVYTYSVLI--------NGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCKN 260
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ A+ I+ QM + P+ +Y+ L +GLC +G A L DEM KG P +
Sbjct: 261 GRVDLAMEIYKQM-LSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFT 319
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E+
Sbjct: 320 YTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREML 379
Query: 388 NKNL-IDGYTYTKLLD 402
+ L D TYT +++
Sbjct: 380 SVGLKPDXGTYTMIIN 395
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
++KQM++ + PD + N++ G +N A + +M + P+ F+Y LI G
Sbjct: 269 IYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSM-KGLKPDKFTYTTLIDGC 327
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A E M ++ +Y +L+S L G + K L EM+ D
Sbjct: 328 CKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDX 387
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGYTYTKLLD 402
TY +++E C++G + K LKE+Q N ++ TY L++
Sbjct: 388 GTYTMIINEFCKKGDVWKGXKXLKEMQRNGHVPXVVTYNVLMN 430
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 128/271 (47%), Gaps = 13/271 (4%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA K+ F HD+S++ + L A Y EM + M+ + + + +
Sbjct: 109 VKIQFFKWAGKRRNFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSE 168
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
I+ +A+ +++A+ VF +K + C+P+ +YN + G ++E +
Sbjct: 169 IVKLLGKAKMVNKALSVFYQIKGRK---CKPAATTYNSMILMLKQEG--------HLEKV 217
Query: 239 RCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
++ +M NDG PD + +++I + H + A+R+F +M Y P + Y L+
Sbjct: 218 HEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLY-PTAKIYTTLL 276
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
+ + A ++ EMK KG + +Y + L G V++ + +MI+
Sbjct: 277 GIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCK 336
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
D + ++++ + + GR +KL +++++
Sbjct: 337 PDVVLINSLINILGKVGRLEVTLKLFRKMES 367
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 118/302 (39%), Gaps = 48/302 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + G Y + ++M + T +Y T++ + + K+ +A+ V
Sbjct: 233 DTVTYSALISAFGKLGHYDSAIRLFDEMKENGLY-PTAKIYTTLLGIYFKLDKVEKALDV 291
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
K MK+ C ++ +Y GK ++ Y +F M+ DG +PD+
Sbjct: 292 IKEMKDKG---CTLTVFTYTEWIKGL---GKAGRVDDAYR-----VFLDMIKDGCKPDVV 340
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL-------------------- 287
+NS+I + L++F +M V YN +
Sbjct: 341 LINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEK 400
Query: 288 -------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
P+SF+Y LI G C R + A L +EM KGF P +Y SL+++L
Sbjct: 401 MKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKR 460
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN-KNLIDGYTYTK 399
E + E+ E Y ++ + GR EA+ L E++ + D Y Y
Sbjct: 461 YEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNA 520
Query: 400 LL 401
L+
Sbjct: 521 LM 522
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
MIK + +++A+ +F++M + + P+ ++Y+ L+ G+ G A+ L M
Sbjct: 486 MIKHFGKCGRLSEAVDLFNEMEKLGSK-PDVYAYNALMSGMVRAGMIDEAQSLLRTMDEN 544
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G P S+N +++ LA G + ++ +M D ++Y TVL + G EA
Sbjct: 545 GCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEA 604
Query: 380 MKLLKELQNKNL-IDGYTYTKLLDVL 404
KL++E+ K + TYT +L+ +
Sbjct: 605 AKLMREMNLKGFEYNNITYTSILEAV 630
>gi|15232243|ref|NP_191564.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181813|sp|Q9M1D8.1|PP288_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g60050
gi|7076758|emb|CAB75920.1| putative protein [Arabidopsis thaliana]
gi|332646485|gb|AEE80006.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 473
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 22/246 (8%)
Query: 122 ELFNWASKQ---PRFRHDASTYHIM---TRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL 175
+L W KQ F D TY+I+ +LG + + D +A F
Sbjct: 236 KLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFD----EMARDGFSPDSYT 291
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +++ + K A+ +MK + PS+ Y L LSR N +
Sbjct: 292 YNILLHILGKGNKPLAALTTLNHMKE---VGIDPSVLHYTTLIDG-LSRAGN-------L 340
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +MV G PD+ MI GY++S ++ A +F +M V LPN F+Y+
Sbjct: 341 EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREM-TVKGQLPNVFTYNS 399
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC G + A L EM+ +G P+ Y++LVS L G++ E K + EM++K
Sbjct: 400 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Query: 356 RPVDFI 361
V +
Sbjct: 460 HYVHLV 465
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 14/280 (5%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
F W+ +Q FRH ++YH++ + Y+ M +V++M+ F T +N +I
Sbjct: 135 FFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMV-QDGFPTTARTFNLLICS 193
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
EA +A V ++MK S+ RP SYN + + L + I VY
Sbjct: 194 CGEAGLAKQA--VVQFMK-SKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVY-------- 242
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
KQM+ DG PD+ + N ++ ++ R+F +M + P+S++Y+ L+H L
Sbjct: 243 KQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARD-GFSPDSYTYNILLHILGK 301
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ A + MK G PS Y +L+ L+ G +E L EM++ D +
Sbjct: 302 GNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVC 361
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLL 401
Y ++ G +A ++ +E+ K L + +TY ++
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 401
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 115/228 (50%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I F ++ A+ +K M+ P + S++ L F +RGK M
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQR---GVTPDVVSFSCLIGLFSTRGK--------M 313
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ ++M G+ PD +I G+ + +++ALR+ +M V LP+ +Y+
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM-VGLGCLPDVVTYNT 372
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L++GLC Q R +A EL +EMK +G P ++ +L+ +G E+ ++ ++ ++
Sbjct: 373 LLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR 432
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
D + Y +++D +CR+G +A +L ++ + + + TY+ L+D
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILID 480
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 15/229 (6%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+Y +I F A +S A+ V M L C P + +YN L + H
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVG---LGCLPDVVTYNTLLNGLCKQ-------HRL 383
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSY 293
++ L +M G+ PD+ + ++I GY + AL++F + ++ L P+ +Y
Sbjct: 384 LDAEE-LLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTL--LHQRLRPDVVAY 440
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LI G+C +G A EL D+M + P+ +Y+ L+ + G+VEE L EM+
Sbjct: 441 NSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVS 500
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
K + +TY +++ CR G + + L+++ N++ D T+ L+
Sbjct: 501 KGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLI 549
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + ++N+L A G ++ L M N G++P I + NS++KG
Sbjct: 190 PDVVTHNVLIDARFRAGD--------VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHR 241
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A +F M + P+ S++ LI G C G + A + EM+++G P S+
Sbjct: 242 RFDKAKEVFRAMDQC-SVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSF 300
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ L+ + G+++ L EM D + Y V+ CR G EA+++ E+
Sbjct: 301 SCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVG 360
Query: 389 KN-LIDGYTYTKLLDVL 404
L D TY LL+ L
Sbjct: 361 LGCLPDVVTYNTLLNGL 377
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 122/286 (42%), Gaps = 38/286 (13%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY+ + L + ++++N+M TP C + T+I+ + +A
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLC----TFTTLIHGYCRDGNFEKA 421
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG--------------KNTYINHV----- 233
+ +F + + R RP + +YN L +G + + NHV
Sbjct: 422 LQLFDTLLHQR---LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSIL 478
Query: 234 --------YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+E +MV+ G P+I + NS+IKGY S +V + +M + N
Sbjct: 479 IDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKM-MQDN 537
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
LP+ +++ LIHG + A + + M+++ P + +YN +++ + G +EE
Sbjct: 538 ILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAG 597
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ +M D TY ++++ G + EA +L E+ ++
Sbjct: 598 RVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGF 643
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+II + + + + + M L P + ++N L + YI M
Sbjct: 510 YNSIIKGYCRSGNVKKGQQFLQKMMQDNIL---PDLITFNTLI--------HGYIKEENM 558
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+F M + ++PD + N +I G+ ++ +A R+F +MG P+ ++Y
Sbjct: 559 HGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGA-SGIEPDRYTYMS 617
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
LI+G G +K A +L DEM +GF P K
Sbjct: 618 LINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 140/310 (45%), Gaps = 44/310 (14%)
Query: 90 QFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGA 149
+ + +++EL P + + + L P L F W + F H+ +Y +M LG
Sbjct: 174 ELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAK-GFTHNEQSYFLMIEILGR 232
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
++ + A +F ++ + + ++ VFK MK + P
Sbjct: 233 SR----------NLNAARNF----------VFSIEKKSGGAESIKVFKTMKE---IGVSP 269
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND-GIEPDIFSLNSMIKGYILSN 268
S+ ++N L + L RG+ + LF +M++ G+ PD ++ N +I+G+ +++
Sbjct: 270 SVVTFNSLLSIVLKRGRTSMAKQ--------LFDEMLDTYGVTPDTYTFNILIRGFCMNS 321
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG--FVPSSK 326
V++ F +M + P+ +Y+ L+ GLC G+ K A + M +K P+
Sbjct: 322 MVDEGFWFFKEMS-RFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVV 380
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL--LK 384
+Y +L+ + ++ E + L EM+ + + ITY T++ +C EA KL +K
Sbjct: 381 TYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLC------EAQKLDKIK 434
Query: 385 ELQNKNLIDG 394
E+ + DG
Sbjct: 435 EILEGMVGDG 444
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 6/173 (3%)
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E+I+ +FK M G+ P + + NS++ + + A ++F +M Y P++++++
Sbjct: 254 ESIK-VFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNI 312
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C EM R P +YN+LV L G+V + N+ + + K+
Sbjct: 313 LIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV-KIAHNVVKGMVKK 371
Query: 356 RP---VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
P + +TY T++ C + EA+ LL E+ ++ L + TY L+ L
Sbjct: 372 SPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGL 424
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 12/240 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + + L A+ ++ +++ M+ F NT+I KL A VF+
Sbjct: 416 TYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEK 475
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV--NDGIEPDIFS 256
M L +P +Y++L + RG + E K+++ + G +P + +
Sbjct: 476 MSE---LRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAE---KEILLHDVGCKPLVAA 529
Query: 257 LNSMIKGYILSN-HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
N M + Y+ SN A R+F Q+ + + SY LI G C +G + +L
Sbjct: 530 YNPMFE-YLCSNGKTKKAERVFRQL--MKRGTQDPPSYKTLILGHCREGTPEAGFDLLVL 586
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M R+ FVP +++Y ++ L G+ K+L +M++ + ++L + + R
Sbjct: 587 MLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKER 646
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 13/219 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y+T+I F ++ ++ A+ V++ M S RP++ Y+ + + GK
Sbjct: 258 EFVYSTVITGFCKSGEIDCALKVWEAMVAS---PVRPNVVLYSAMIGGLANFGK------ 308
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
M LF++M++ P+I + SMI+GY + AL ++ +M + +PN+ S
Sbjct: 309 --MTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEM-IGAGCMPNAVS 365
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+GLC GR K+A + M +G P + +Y S++ L ++G V+ ++ ++M+
Sbjct: 366 YSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDML 425
Query: 353 EKQRP-VDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
D I+Y +LD + AM LL + ++
Sbjct: 426 ASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQG 464
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 119/271 (43%), Gaps = 17/271 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + L A + +V++M+A EA +N ++ A + A +
Sbjct: 118 DKFTYSTVVSALADAGRVDDAVALVHEMVAD-GVVAAEA-FNPVLRAMLRAGDVKGAAKL 175
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F++M+ C P+ +YN+L L G+ V ++M +G+ P +
Sbjct: 176 FEFMQLK---GCVPTAATYNVLVHGLLVCGRAGAAMGV--------MRRMEREGVVPGVM 224
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCD 314
+ +++ G + V DA ++ +M N L N F Y +I G C G A ++ +
Sbjct: 225 TYGAVVDGLVRCGRVKDAWKVAEEME--RNGLARNEFVYSTVITGFCKSGEIDCALKVWE 282
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M P+ Y++++ LA G++ E EMI+ + + ITY +++ + G
Sbjct: 283 AMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIG 342
Query: 375 RAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
A+ + +E+ + + +Y+ L++ L
Sbjct: 343 DTSRALSVWEEMIGAGCMPNAVSYSILINGL 373
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 94/187 (50%), Gaps = 10/187 (5%)
Query: 209 PSIRSYNILF----TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
P++ S+N+L ++ + R Y++ +R L + + + PD F+ ++++
Sbjct: 74 PTLLSFNLLLKCVCSSLVPRDPRRYLD----VALRILHEIIPGWDLAPDKFTYSTVVSAL 129
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ V+DA+ + H+M V + + + +++ ++ + G K A +L + M+ KG VP+
Sbjct: 130 ADAGRVDDAVALVHEM--VADGVVAAEAFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPT 187
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ +YN LV L + G + + M + +TY V+D + R GR +A K+ +
Sbjct: 188 AATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAE 247
Query: 385 ELQNKNL 391
E++ L
Sbjct: 248 EMERNGL 254
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I + + SRA+ V++ M + C P+ SY+IL + G+ +
Sbjct: 331 YGSMIQGYFKIGDTSRALSVWEEMIGA---GCMPNAVSYSILINGLCNVGR--------L 379
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ ++K M++ G PD + SMIKG +S V+ LR+F+ M + P+ SY+
Sbjct: 380 KDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNV 439
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
L+ GL A +L + M +G P + + N
Sbjct: 440 LLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCN 473
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 250 IEPDIFSLNSMIKGYILS-------NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
+ P + S N ++K S +++ ALRI H++ ++ P+ F+Y ++ L
Sbjct: 72 LAPTLLSFNLLLKCVCSSLVPRDPRRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALAD 131
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD-FI 361
GR +A L EM G V +++++N ++ A+ G+V+ K L+E ++ + V
Sbjct: 132 AGRVDDAVALVHEMVADGVV-AAEAFNPVLRAMLRAGDVKGAAK-LFEFMQLKGCVPTAA 189
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
TY ++ + GRAG AM +++ ++ + ++ G TY ++D L
Sbjct: 190 TYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGL 233
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 16/270 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLA--TPSFCGTEAL-YNTIIYFFAEARKLSRA 192
+A +Y+I+ + L Q+ +++ M+A T C + + Y T+I +L +A
Sbjct: 166 NAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKA 225
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F M + P+ +YN L + S GK E I +F++M DG+EP
Sbjct: 226 YCLFDEMLDQ---GMSPNCITYNCLLHGYCSSGKPK-------EAIG-IFRKMCRDGVEP 274
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + N+++ + +A ++F M V + P+S Y L+HG +G +L
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSM-VKKGHKPDSSIYGTLLHGYATEGYLVQMHQL 333
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D M R G P +N L+ A A +G V+E + +M ++ + +TY TV+D +CR
Sbjct: 334 LDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCR 393
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
G+ +AM L ++ L +G + L+
Sbjct: 394 VGKVDDAMSQFDRLISEGLTPNGVVFRTLI 423
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 24/233 (10%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
++Y T+++ +A L + + M RN +P +NIL A Y H
Sbjct: 312 SIYGTLLHGYATEGYLVQMHQLLDVM--VRN-GTQPDHYIFNILIGA--------YAKHG 360
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
++ F +M G+ P+I + +++ V+DA+ F ++ + PN +
Sbjct: 361 MVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL-ISEGLTPNGVVF 419
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE-MI 352
LIHGLCA + A EL EM +G P++ +N+L++ L G V KN+++ M+
Sbjct: 420 RTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRA-KNIFDLMV 478
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLK----------ELQNKNLIDGY 395
D ITY T++D C G+ EA KLL+ E+ +I+GY
Sbjct: 479 RVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGY 531
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 122/272 (44%), Gaps = 20/272 (7%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLS 190
+ D+S Y + +M +++ M+ GT+ ++N +I +A+ +
Sbjct: 308 KPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRN----GTQPDHYIFNILIGAYAKHGMVD 363
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A+ F M R P+I +Y + A GK ++ F +++++G+
Sbjct: 364 EAMLAFSKM---RQQGLHPNIVTYGTVMDALCRVGK--------VDDAMSQFDRLISEGL 412
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P+ ++I G + + A + +M + PN+ ++ L++ LC +G A+
Sbjct: 413 TPNGVVFRTLIHGLCACDKWDKAEELAVEM-IGRGICPNTIFFNTLLNHLCKEGMVTRAK 471
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ D M R +Y +L+ L+G+V+E K L M+ + +TY T+++
Sbjct: 472 NIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGY 531
Query: 371 CRRGRAGEAMKLLKELQNKNLIDGYT-YTKLL 401
C+ GR +A L +++ +K + G Y+ +L
Sbjct: 532 CKNGRIEDACSLFRQMASKGVNPGIVIYSTIL 563
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 5/165 (3%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+++ G + + ++KG +DA+ I + PN+FSY+ L+ GLC
Sbjct: 119 LGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLC 178
Query: 302 AQGRTKNARELCDEM----KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
+ R++ A L M R G P SY ++++ L G++++ EM+++
Sbjct: 179 DENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMS 238
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ ITY +L C G+ EA+ + +++ + D TY L+
Sbjct: 239 PNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLM 283
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 12/167 (7%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E YNTII + + ++ A +F+ M + P I Y+ + +
Sbjct: 521 EVTYNTIINGYCKNGRIEDACSLFRQMASK---GVNPGIVIYSTILHGLFQTRRIAAAKE 577
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+Y+ I+C GI+ I + N +++G +N +DALR+FH + ++ +L N +
Sbjct: 578 LYLWMIKC--------GIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNR-T 628
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
++ +I L GR A++L + +G VP+ +Y ++ +L G
Sbjct: 629 FNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 138/332 (41%), Gaps = 65/332 (19%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F+ D +Y + + L AAK +++++ + +M+ + E ++ ++ FF + RA
Sbjct: 238 FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVEN-NCVPNEVTFDMLVRFFCRGGMVERA 296
Query: 193 VYV--------------------------------FKYMKNSRNLECRPSIRSYNILFTA 220
+ V F+++ N + C P SY +
Sbjct: 297 IEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKG 356
Query: 221 FLSRG--------------KNTYINHVYMETIRC-------------LFKQMVNDGIEPD 253
G KN N V T C L +QM G
Sbjct: 357 LCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVG 416
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
I + N+++ G+ + V+ AL +F+ + PN+ +Y L+ GLC R A EL
Sbjct: 417 IVTYNALVNGFCVQGRVDSALELFNSLPCE----PNTITYTTLLTGLCHAERLDAAAELL 472
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
EM + + ++N LVS G VEE ++ + +M+E + IT+ T+LD I
Sbjct: 473 AEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITED 532
Query: 374 GRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ EA++LL L +K + +D TY+ ++DVL
Sbjct: 533 CNSEEALELLHGLVSKGISLDTITYSSIVDVL 564
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 5/157 (3%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G D+F+ N+++ GY ++ A R+ M V P++++Y LI GLC +GR +
Sbjct: 100 GAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVP----PDAYTYTPLIRGLCDRGRVGD 155
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L D+M R+ PS +Y L+ A+ + + +K L EM K + +TY +++
Sbjct: 156 ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIIN 215
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+CR R +A ++L L + D +YT +L L
Sbjct: 216 GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGL 252
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ A +L A + M + +C ++ ++N+L + F +G ++
Sbjct: 452 YTTLLTGLCHAERLDAAAELLAEMMQN---DCPLNVVTFNVLVSFFCQKG--------FV 500
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYD 294
E L +QM+ G P++ + N+++ G + +AL + H G+V + ++ +Y
Sbjct: 501 EEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLH--GLVSKGISLDTITYS 558
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ L + R + A ++ ++ G P + YN ++SAL E + + M+
Sbjct: 559 SIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSN 618
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ TY +++ + R G EA +L EL ++ ++
Sbjct: 619 SCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVL 656
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 88/211 (41%), Gaps = 15/211 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + +L A + M P +Y L RG+ +
Sbjct: 108 YNTLVAGYCRYGRLDAARRLIASMPVP------PDAYTYTPLIRGLCDRGR--------V 153
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L M+ +P + + +++ S+ A+++ +M PN +Y+
Sbjct: 154 GDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRA-KGCTPNIVTYNV 212
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+G+C + R +AR++ + + GF P + SY +++ L E+ EM+E
Sbjct: 213 IINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENN 272
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ +T+ ++ CR G A+++L +
Sbjct: 273 CVPNEVTFDMLVRFFCRGGMVERAIEVLDRM 303
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 12/180 (6%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN L + G+ ++ R L M + PD ++ +I+G V D
Sbjct: 107 AYNTLVAGYCRYGR--------LDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGD 155
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
AL + M + P+ +Y L+ +C A ++ DEM+ KG P+ +YN ++
Sbjct: 156 ALSLLDDM-LRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVII 214
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ + V++ + L + D ++Y TVL +C R + L E+ N +
Sbjct: 215 NGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCV 274
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+ + LI LC +GRT +A + + G +YN+LV+ G ++ +
Sbjct: 68 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRL 127
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL-- 404
+ M P D TY ++ +C RGR G+A+ LL ++ + TYT LL+ +
Sbjct: 128 IASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCK 184
Query: 405 EDDFGNSIR 413
FG +++
Sbjct: 185 SSGFGQAMK 193
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 2/107 (1%)
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
L A+ A L + +G P L+ L G + + L PVD
Sbjct: 45 LIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVD 104
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLED 406
Y T++ CR GR A +L+ + D YTYT L+ L D
Sbjct: 105 VFAYNTLVAGYCRYGRLDAARRLIASMPVPP--DAYTYTPLIRGLCD 149
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 153 YQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
Y+ MDD +N + + T Y+++I + S A + M + P
Sbjct: 64 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---INPD 120
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ +++ L AF+ GK +Y E MV I+P I + +S+I G+ + + +
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDE--------MVKRSIDPSIVTYSSLINGFCMHDRL 172
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
++A ++F M V + P+ +Y+ LI G C R + E+ EM ++G V ++ +YN
Sbjct: 173 DEAKQMFEFM-VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ L G+ + + EM+ P + +TY T+LD +C+ G+ +AM + + LQ
Sbjct: 232 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 291
Query: 391 LIDG-YTYTKLLD 402
+ YTY +++
Sbjct: 292 MEPTIYTYNIMIE 304
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F + +++ + VF+ M + R L + +YNIL G +
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREM-SQRGL--VGNTVTYNILIQGLFQAGDCDMAQEI-- 248
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL------PN 289
FK+MV+DG+ P+I + N+++ G + + A+ VV+ YL P
Sbjct: 249 ------FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM-------VVFEYLQRSKMEPT 295
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
++Y+ +I G+C G+ ++ +L + KG P +YN+++S G EE
Sbjct: 296 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 355
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
EM E + Y T++ R G + +L+KE+++
Sbjct: 356 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 394
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKL---GAAKMYQEMDDVVNQML--ATPSFCGTEAL 175
+E+F S Q + TY+I+ + L G M QE + +M+ P T
Sbjct: 211 MEVFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQE---IFKEMVSDGVPPNIMT--- 263
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + KL +A+ VF+Y++ S+ P+I +YNI+ GK +
Sbjct: 264 YNTLLDGLCKNGKLEKAMVVFEYLQRSK---MEPTIYTYNIMIEGMCKAGK--------V 312
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF + G++PD+ + N+MI G+ +A +F +M LPNS Y+
Sbjct: 313 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYNT 371
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
LI G + + EL EM+ GF + + LV+ + +G ++++
Sbjct: 372 LIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS 419
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +MV G +PD+ + ++ G + A + ++M P Y+ +I GL
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGL 61
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +A L EM+ KG P+ +Y+SL+S L G + + L +MIE++ D
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
T+ ++D + G+ EA KL E+ +++
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 152
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 13/254 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + +L K + V +M AT +YN ++ + K+ A +
Sbjct: 8 DALTYGPIVERLCKTKRIDDALATVEEM-ATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ M R P++ +YN L + +ET LFK+M G P
Sbjct: 67 FEKMVKQR---INPNVVTYNTLINGLCKAWR--------IETAYELFKEMAGKGYVPTEV 115
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
S N++I G+ + A +F +M V N +PN +Y LI GL G+ + A E+ D
Sbjct: 116 SYNTLIDGFCKKKDLVAAKDVFDKM-VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDG 174
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +KG P+ +Y+ L+ V+E K L +M+ + +TY +L+ +CR +
Sbjct: 175 MVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADK 234
Query: 376 AGEAMKLLKELQNK 389
+A KL + + +
Sbjct: 235 LEDAFKLFRGMAQR 248
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 19/240 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y I+ + +++ A+ + M +R + +P YN + + K +
Sbjct: 12 YGPIVERLCKTKRIDDALATVEEMA-TRGI--KPDAFIYNFVLSGLCQEEK--------V 60
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R LF++MV I P++ + N++I G + + A +F +M Y+P SY+
Sbjct: 61 EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAG-KGYVPTEVSYNT 119
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C + A+++ D+M R VP+ +Y +L+ L+ +G+V+ + L M++K
Sbjct: 120 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 179
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL------DVLEDDF 408
+ TY ++D C+ R EA KLL+++ + + TY LL D LED F
Sbjct: 180 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAF 239
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 18/281 (6%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
LC ++E L LF KQ R + TY+ + L A + ++ +M A
Sbjct: 54 LCQEEKVEEARL----LFEKMVKQ-RINPNVVTYNTLINGLCKAWRIETAYELFKEM-AG 107
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
+ TE YNT+I F + + L A VF M S C P++ +Y L GK
Sbjct: 108 KGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS---NCVPNVVTYTTLIDGLSKSGK 164
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
V MV G+ P++ + + +I G+ V++A ++ QM V
Sbjct: 165 VQAAAEV--------LDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQM-VTQGI 215
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
P +Y+ L++ LC + ++A +L M ++ P+ +YN+L+ AL + +++ +
Sbjct: 216 APTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHR 275
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
EMI K P D ITY T+ + R G+ EA +L+++++
Sbjct: 276 LYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 13/226 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I +A ++ A +FK M + P+ SYN L F + +
Sbjct: 82 YNTLINGLCKAWRIETAYELFKEMAGKGYV---PTEVSYNTLIDGFCKKKD--------L 130
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F +MV P++ + ++I G S V A + M V PN +Y
Sbjct: 131 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGM-VKKGVTPNVATYSC 189
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C R A +L ++M +G P+ +YN L+++L ++E+ K M +++
Sbjct: 190 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 249
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKL 400
+TY T+L +C + A +L E+ K D TY L
Sbjct: 250 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTL 295
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P++ +Y ++ LC R +A +EM +G P + YN ++S L +VEE +
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEA-RL 65
Query: 348 LWEMIEKQR--PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGY 395
L+E + KQR P + +TY T+++ +C+ R A +L KE+ K LIDG+
Sbjct: 66 LFEKMVKQRINP-NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 124
Query: 396 TYTKLLDVLEDDFGNSIR 413
K L +D F +R
Sbjct: 125 CKKKDLVAAKDVFDKMVR 142
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 31/243 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS----RGKNTYIN 231
Y+TII + R+++ A+ +F YMK P+I +YN L + R + +N
Sbjct: 48 YSTIIDSLCKDRRVNEALDIFSYMKAK---GISPNIFTYNSLIQGLCNFSRWREASAMLN 104
Query: 232 HVYMETI-----------------------RCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ I R + K M G+EP++ + +S++ GY L
Sbjct: 105 EMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQA 164
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V +A ++F M + P+ FSY+ LI+G C R A++L +EM +G P SY
Sbjct: 165 EVFEARKLFDVM-ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 223
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+ L G + E M+ D TY +LD C++G +A +L + +Q+
Sbjct: 224 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 283
Query: 389 KNL 391
L
Sbjct: 284 TYL 286
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 14/283 (4%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L++F++ K + TY+ + + L ++E ++N+M++ + ++ +I
Sbjct: 65 LDIFSYM-KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSL-NIMPNIVTFSLLI 122
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
F + + A V K M + P++ +Y+ L N Y + R
Sbjct: 123 NIFCKEGNVFEARGVLKTMTE---MGVEPNVVTYSSLM--------NGYSLQAEVFEARK 171
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF M+ G +PD+FS N +I GY + + +A ++F++M + P+ SY+ LI GL
Sbjct: 172 LFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEM-IHQGLTPDIVSYNTLIDGL 230
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C GR + A +L M G +P +Y+ L+ G + + + M +
Sbjct: 231 CQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNM 290
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDV 403
+ Y ++D +C+ EA KL EL + L + KL ++
Sbjct: 291 VMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLFEI 333
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 95/235 (40%), Gaps = 49/235 (20%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRC--LFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y + G ET+ LFK+M G +PD+ + +++I
Sbjct: 7 QPDVHTYTTIINGLCKIG----------ETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLC 56
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL------------------------- 300
VN+AL IF M PN F+Y+ LI GL
Sbjct: 57 KDRRVNEALDIFSYMK-AKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNI 115
Query: 301 ----------CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
C +G AR + M G P+ +Y+SL++ +L EV E K
Sbjct: 116 VTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDV 175
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
MI K D +Y +++ C+ R GEA +L E+ ++ L D +Y L+D L
Sbjct: 176 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGL 230
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 18/177 (10%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
MV G +PD+ + ++I G A +F +MG P+ +Y +I LC
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEA-GCQPDVVTYSTIIDSLCKDR 59
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R A ++ MK KG P+ +YNSL+ L E L EM+ + +T+
Sbjct: 60 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 119
Query: 365 TVLDEICRRGRAGEAMKLLKELQN----------KNLIDGYTYT-------KLLDVL 404
+++ C+ G EA +LK + +L++GY+ KL DV+
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 135/304 (44%), Gaps = 43/304 (14%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNT 178
+E FN + + +A TY + R ++ ++ ++ML + C +A+ Y T
Sbjct: 470 AVEFFNEMQGKG-LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE--AGCSPDAIVYYT 526
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------------ 226
+I ++A KL RA +V MK + P I S+N+L F + K
Sbjct: 527 LISGLSQAGKLDRASFVLSKMKEAG---FSPDIVSFNVLINGFCRKNKLDEAYEMLKEME 583
Query: 227 -----------NTYINHVY----METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
NT I+H T L K+MV +G+ P + + ++I Y L+ +++
Sbjct: 584 NAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLD 643
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
+A++IF M PN+ Y+ LI+ LC + + A L D+MK KG P++ ++N++
Sbjct: 644 EAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAM 703
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
L + + + + M E D+IT + + + GE KL K+
Sbjct: 704 FKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWL---SAVGETAKL------KSF 754
Query: 392 IDGY 395
+ GY
Sbjct: 755 VQGY 758
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 59/310 (19%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRA 192
+A++ + + LG A+ ++ M+ ++ +M P+ L N + F R++ A
Sbjct: 304 EAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKF----RRVDEA 359
Query: 193 VYVFKYMKN--SRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+ VF+ M S P + +YN L G+ +E +R + M
Sbjct: 360 LEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEE-GLGLVERMRSQPRCM----- 413
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGR-- 305
P+ + N +I GY ++ + A +F QM GV PN + + L+ G+C GR
Sbjct: 414 -PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVP----PNVVTLNTLVDGMCKHGRIN 468
Query: 306 ---------------------------------TKNARELCDEMKRKGFVPSSKSYNSLV 332
+ A EL DEM G P + Y +L+
Sbjct: 469 GAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLI 528
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
S L+ G+++ L +M E D +++ +++ CR+ + EA ++LKE++N +
Sbjct: 529 SGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIK 588
Query: 392 IDGYTYTKLL 401
DG TY L+
Sbjct: 589 PDGVTYNTLI 598
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+ PNS LI LC GRT A ++ + + G V + S N+L++AL E +
Sbjct: 264 HEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKR 323
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL----QNKNLI--DGYTY 397
L EM E + +T+ +++ +C+ R EA+++ +++ N L+ D TY
Sbjct: 324 MNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITY 383
Query: 398 TKLLDVL 404
L+D L
Sbjct: 384 NTLIDGL 390
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 21/288 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYN 177
+++FN +Q DA +Y + L + + NQM+ TP+ +++
Sbjct: 50 MDIFN-KMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI----VVFS 104
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
+++Y K + +F M N+ P+I +N + G+ +++
Sbjct: 105 SLVYGLCSIDKWEKVEELFFEM---LNVGIHPNIVFFNTILCNLCKEGR-VMEGQRLVDS 160
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
I C+ G+ PD+ S N++I G+ L+ +++A ++ M V PNSFSY+ L+
Sbjct: 161 IECM-------GVRPDVISYNTLIDGHCLAGTIDEASKLLEGM-VSVGLKPNSFSYNTLL 212
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
HG C GR +A L +M G P +YN+++ L E + MI
Sbjct: 213 HGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 272
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
TY T+L+ +C+ EA K+ + L +K L ++ T+T ++ L
Sbjct: 273 WGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 320
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 13/228 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC---RPSIRSYNILFTAFLSRGKNTYI 230
++ I++F L + V + + ++EC RP + SYN L G
Sbjct: 130 GIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGT---- 185
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
++ L + MV+ G++P+ FS N+++ GY + ++ A +F +M + P
Sbjct: 186 ----IDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKM-LSNGITPGV 240
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y+ ++HGL R A+EL M G +YN++++ L + V+E K
Sbjct: 241 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQS 300
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
+ K ++ IT+ ++ + + GR +AM L + L+ D TY
Sbjct: 301 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTY 348
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
Y N + + L MV +GI P+ N Y ++ A+ IF++M + P
Sbjct: 5 YGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKM-RQHGLSP 63
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
++ SY LI LC GR +A ++M +G P+ ++SLV L + E+ +
Sbjct: 64 DAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELF 123
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+EM+ + + + T+L +C+ GR E +L+ ++ + D +Y L+D
Sbjct: 124 FEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLID 178
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTI++ + ++ S A ++ M NS + I +YN + K+ ++ +
Sbjct: 243 YNTILHGLFQTKRFSEAKELYLNMINSGT---KWGIYTYNTILNGLC---KSNCVDEAFK 296
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+F+ + + G++ +I + MI + DA+ +F + +P+ +Y
Sbjct: 297 -----MFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI-PANGLVPDVVTYRV 350
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+ L +G + L M++ G P+S+ N+LV L G++ L ++ E+
Sbjct: 351 VAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 410
Query: 356 RPVD 359
V+
Sbjct: 411 FSVE 414
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 45/96 (46%)
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++HG +G +L + M G P+ +N SA A G +++ + +M +
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D ++Y ++D +C+ GR +A ++ N+ +
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGV 96
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 19/231 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y I + EA + + A KY+K R P+ L + +GK Y
Sbjct: 525 YGAFISGYIEASEFASAD---KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY- 580
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ MV+ GI D + ++ G ++ V+DA IF +M G+ P+ FS
Sbjct: 581 -------RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA----PDVFS 629
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+G G + A + DEM +G P+ YN L+ +GE+E+ + L EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
K + +TY T++D C+ G EA +L E++ K L+ D + YT L+D
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F++M GI PD+FS +I G+ ++ A IF +M V PN Y+ L+ G
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM-VEEGLTPNVIIYNMLLGGF 672
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G + A+EL DEM KG P++ +Y +++ +G++ E + EM K D
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 361 ITYRTVLDEICR 372
Y T++D CR
Sbjct: 733 FVYTTLVDGCCR 744
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 109/272 (40%), Gaps = 53/272 (19%)
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
G Y ++ + K+ A +F+ M R P + SY +L F G
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREM---RGKGIAPDVFSYGVLINGFSKLGN---- 642
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
M+ +F +MV +G+ P++ N ++ G+ S + A + +M V PN+
Sbjct: 643 ----MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNA 697
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL-- 348
+Y +I G C G A L DEMK KG VP S Y +LV +VE +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 349 -----------------W-----------EMIEK---------QRPVDFITYRTVLDEIC 371
W E++ + +P D +TY ++D +C
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND-VTYNIMIDYLC 816
Query: 372 RRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
+ G A +L ++QN NL+ TYT LL+
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 15/229 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ + L A + K M S CRP++ Y L FL N +
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASG---CRPNVVIYTTLIKTFLQ-------NSRFG 469
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
+ +R L K+M GI PDIF NS+I G + +++A +M V N L PN+F+Y
Sbjct: 470 DAMRVL-KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM--VENGLKPNAFTYG 526
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
I G +A + EM+ G +P+ L++ G+V E M+++
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D TY +++ + + + +A ++ +E++ K + D ++Y L++
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+Y++L L +G+N + + L +MV+ GI + + I +
Sbjct: 314 TYSLLIDGLL-KGRNA-------DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A +F M + +P + +Y LI G C + + EL EMK++ V S +Y ++V
Sbjct: 366 AKALFDGM-IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ +G+++ + EMI + + Y T++ + R G+AM++LKE++ + +
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 393 -DGYTYTKLL 401
D + Y L+
Sbjct: 485 PDIFCYNSLI 494
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME + LF M+ G+ P + S+I+GY +V + +M N + + ++Y
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYG 421
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ G+C+ G A + EM G P+ Y +L+ N + ++ L EM E+
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D Y +++ + + R EA L E+ L + +TY +
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 118/326 (36%), Gaps = 76/326 (23%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQM----LATPSFCGTEALYNTIIYFFAEARKLSR 191
DA TY ++ L + +++ +M +A F Y +I F++ + +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS-----YGVLINGFSKLGNMQK 645
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG--------------KNTYINHVYMET 237
A +F M P++ YN+L F G K + N V T
Sbjct: 646 ASSIFDEMVEEG---LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 238 I---RC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ----- 279
I C LF +M G+ PD F +++ G N V A+ IF
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 280 ------MGVVYNYL--------------------------PNSFSYDYLIHGLCAQGRTK 307
+ N++ PN +Y+ +I LC +G +
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A+EL +M+ +P+ +Y SL++ G E E I D I Y ++
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 368 DEICRRGRAGEAMKLLKELQNKNLID 393
+ + G +A+ L+ ++ KN +D
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVD 908
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 15/206 (7%)
Query: 172 TEALYNTII-YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
+ A +N +I + F + + + + M S + +P+ +YNI+ G
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN---- 820
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
+E + LF QM N + P + + S++ GY + +F + + P+
Sbjct: 821 ----LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-AIAAGIEPDH 875
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP-----SSKSYNSLVSALALNGEVEETV 345
Y +I+ +G T A L D+M K V S + +L+S A GE+E
Sbjct: 876 IMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAE 935
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEIC 371
K + M+ Q D T +++E C
Sbjct: 936 KVMENMVRLQYIPDSATVIELINESC 961
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 152/417 (36%), Gaps = 93/417 (22%)
Query: 66 LSRSSSRGVGKRSKADSKPA--LDDTQFRCAV--SELPPRFNNEELCNVMTLQ--EDPLV 119
L RS S V K S A ++ A L +R + S L N E + +V+ + +DP
Sbjct: 20 LFRSFSVNVEKLSDASAEIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSK 79
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--------------- 164
L FNW Q ++ + L +++ VV +M+
Sbjct: 80 LLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVR 139
Query: 165 ATPSFCGTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+ F G L+ + + + AV+VF +S LE P + +L A
Sbjct: 140 CSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFS---SSMGLELVPRLSRCKVLLDAL 196
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV----------- 270
L + VY K MV + D+ + + +I + + +V
Sbjct: 197 LRWNRLDLFWDVY--------KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTE 248
Query: 271 ----------NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+ AL++ M + +P ++YD LI GLC R ++A+ L EM G
Sbjct: 249 KEFRTATLNVDGALKLKESM-ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307
Query: 321 FVPSSKSYNSLVSAL-------ALNGEVEETV---------------------------K 346
+ +Y+ L+ L A G V E V K
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
Query: 347 NLWE-MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
L++ MI Y ++++ CR + +LL E++ +N+ I YTY ++
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
>gi|255660920|gb|ACU25629.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 484
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHXFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVITYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y M+ F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
Y PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ G
Sbjct: 247 K-GYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYMAPTDNSIFXRLISSQCKTG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKAVKLLDKLIEKDII 358
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 134/296 (45%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHGSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF L RG+ +M R F +M+++GIEP N MI G+ LS V A
Sbjct: 118 YDALFKVILRRGR-------FMMAKR-YFNKMLSEGIEPTRHXFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMK-SREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K
Sbjct: 229 GYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDK 284
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SYD L + +GR A+ ++M +G P+ +N ++ L+G+V
Sbjct: 111 VERTIK----SYDALFKVILRRGRFMMAKRYFNKMLSEGIEPTRHXFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D ITY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 10/196 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+ +
Sbjct: 209 QPDVYTYSVLINGLCKEXK--------MDDANELFDEMLVKGLVPNXVTFTTLIDGHCKN 260
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A +L EM KG P +
Sbjct: 261 GRVDLAMEIYKQM-LSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKIT 319
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L+ G ++ ++ MIE+ +D + Y ++ +C+ GR +A K+L+ +
Sbjct: 320 YTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXML 379
Query: 388 NKNL-IDGYTYTKLLD 402
+ L D TYT +++
Sbjct: 380 SVGLKPDAXTYTMIIN 395
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 52/227 (22%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 107 FDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGD--------I 158
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+F + G+ P + S N+++ GYI +++ R+ M P+ ++Y
Sbjct: 159 RVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM-XASGVQPDVYTYSV 217
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM KG VP+
Sbjct: 218 LINGLCKEXKMDDANELFDEMLVKGLVPNX------------------------------ 247
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+T+ T++D C+ GR AM++ K++ +++L+ D TY L+
Sbjct: 248 -----VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLI 289
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ ++ L+ F W + F+H+ T+ + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHGAKNSEHALQFFRWVERSNLFQHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + + +V +F+ M L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVLMIDSYGNGGIVQESVKLFQKMDE---LGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YDALFKVISRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFEDMKN-REITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K
Sbjct: 229 GYVSVDQVDDALRLVEEMKGYGIKANAITYSTLLPGLCNAEKMSEARSILKEMVDK 284
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVLMIDSYGNGGIVQESVKLFQKMDELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SYD L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYDALFKVISRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D ITY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKNREITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 43/318 (13%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA- 174
D + C L +K+ +F T + L K ++ + D ++L CG A
Sbjct: 84 DAIQCFRL----TKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYKEILE----CGYPAS 135
Query: 175 --LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------ 226
+N +++ F + ++ RA VF + RPS+ S+N L ++ G
Sbjct: 136 LYFFNIVMHRFCKEGEMRRAQSVFDAITK---WGLRPSVVSFNTLMNGYIRLGDLDEGFR 192
Query: 227 -----------------NTYINHVYMET----IRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+ IN + E+ LF +M++ G+ P+ + ++I +
Sbjct: 193 LKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHC 252
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + P+ +Y+ LI+GLC +G K R L DEM G P
Sbjct: 253 KNGMVDSAMEIYKQM-LSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDK 311
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G++E + MI++ +D + Y ++ +C+ GRA +A K+ +E
Sbjct: 312 ITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFRE 371
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 372 MLSVGLKPDNGTYTMIIN 389
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 127/245 (51%), Gaps = 10/245 (4%)
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS 202
+ R L AKM++E+ ++ N +L++ + +++ FA++ + +A F+ ++ S
Sbjct: 45 IARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVR-S 103
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
R E +PS+ YN+L + + + +++ +Y + + C GI P ++ N +I+
Sbjct: 104 RFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLC--------GIAPQTYTFNLLIR 155
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
S+ V+ A +F +M PN F++ L+ G C G T EL + M+ G +
Sbjct: 156 ALCDSSCVDAARELFDEM-PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVL 214
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P+ YN++VS+ G +++ K + +M E+ D +T+ + + +C+ G+ +A ++
Sbjct: 215 PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274
Query: 383 LKELQ 387
+++
Sbjct: 275 FSDME 279
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 124/246 (50%), Gaps = 22/246 (8%)
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
+ L A++++ +M+ +++ L P YN ++ F + L A +F+ ++ + +
Sbjct: 267 KVLDASRIFSDME--LDEYLGLPR--PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
L S++SYNI + GK + ET+ KQM + GI P I+S N ++ G
Sbjct: 323 L---ASLQSYNIWLQGLVRHGK-----FIEAETV---LKQMTDKGIGPSIYSYNILMDGL 371
Query: 265 ILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
++DA I M GV P++ +Y L+HG C+ G+ A+ L EM R
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVC----PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P++ + N L+ +L G + E + L +M EK +D +T ++D +C G +A++
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 382 LLKELQ 387
++K ++
Sbjct: 488 IVKGMR 493
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N I+ + +L +A+ + K M+ + +A L N+YI V
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMR---------------VHGSAALGNLGNSYIGLVD-- 512
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
++ + PD+ + ++++ G + +A +F +M + P+S +Y+
Sbjct: 513 ------DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM-MGEKLQPDSVAYNIF 565
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
IH C QG+ +A + +M++KG S ++YNSL+ L + ++ E + EM EK
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ TY T + +C + +A LL E+ KN+
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 107/278 (38%), Gaps = 47/278 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + L A + E ++ +M+ + A YN I+ F + K+S A
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVA-YNIFIHHFCKQGKISSA--- 578
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ +K+ C S+ +YN L + N ++ I L +M GI P+I
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIK------NQIF--EIHGLMDEMKEKGISPNIC 630
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC-------------- 301
+ N+ I+ V DA + +M + N PN FS+ YLI C
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEM-MQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFET 689
Query: 302 --------------------AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
A G+ A EL + + +GF + Y LV +L E+
Sbjct: 690 AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDEL 749
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
E L +MI++ D V+D + + G EA
Sbjct: 750 EVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 11/231 (4%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC-RPSIRSYNILFTAFLSRGKNTYINHVY 234
+N+ I + K+ A +F M+ L RP+ +YN++ F G
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVG--------L 306
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E + LF+ + + + S N ++G + +A + QM P+ +SY+
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM-TDKGIGPSIYSYN 365
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GLC G +A+ + MKR G P + +Y L+ G+V+ L EM+
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ T +L + + GR EA +LL+++ K +D T ++D L
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 9/166 (5%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P + +Y+ L G+ + LF +M+ + ++PD + N I +
Sbjct: 520 CLPDLITYSTLLNGLCKAGR--------FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCK 571
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++ A R+ M + + +Y+ LI GL + + L DEMK KG P+
Sbjct: 572 QGKISSAFRVLKDMEKKGCH-KSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+YN+ + L +VE+ L EM++K + +++ +++ C+
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 21/260 (8%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF--FAEARKLSRAVYVFKYMKNSR 203
K G ++ Q + D + + PS L N I E +L A+ + N
Sbjct: 136 KDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM-----LANG- 189
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G
Sbjct: 190 ---VQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLIPNGVTFTTLIDG 238
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ + V+ A+ I+ +M + + LP+ +Y+ LI+GLC G K A +L DEM KG P
Sbjct: 239 HCKNGRVDLAMEIYKRM-LSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKP 297
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+Y +L+ G+++ K+ MI++ +D + Y ++ +C+ G++ +A K+L
Sbjct: 298 DKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKML 357
Query: 384 KELQNKNL-IDGYTYTKLLD 402
+E+ + L D TYT +++
Sbjct: 358 REMLSVGLKPDIGTYTMIIN 377
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
++K+M++ + PD+ + N++I G + + A + +M + P+ F+Y LI G
Sbjct: 251 IYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSM-KGLKPDKFTYTTLIDGC 309
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A + M ++ +Y +L+S L G+ + K L EM+ D
Sbjct: 310 CKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDI 369
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQ 387
TY +++E C++G + KLLKE+Q
Sbjct: 370 GTYTMIINEFCKKGDVWKGSKLLKEMQ 396
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF-----HQMGVVYN---------------------- 285
DI+ + +I Y+ S + DA+ + H++ V ++
Sbjct: 53 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFY 112
Query: 286 -------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++
Sbjct: 113 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M+ D TY +++ +C+ + +A +L E+ K LI +G T+
Sbjct: 173 GDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 232
Query: 398 TKLLD 402
T L+D
Sbjct: 233 TTLID 237
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 19/231 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y I + EA + + A KY+K R P+ L + +GK Y
Sbjct: 525 YGAFISGYIEASEFASAD---KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY- 580
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ MV+ GI D + ++ G ++ V+DA IF +M G+ P+ FS
Sbjct: 581 -------RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA----PDVFS 629
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+G G + A + DEM +G P+ YN L+ +GE+E+ + L EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
K + +TY T++D C+ G EA +L E++ K L+ D + YT L+D
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F++M GI PD+FS +I G+ ++ A IF +M V PN Y+ L+ G
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM-VEEGLTPNVIIYNMLLGGF 672
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G + A+EL DEM KG P++ +Y +++ +G++ E + EM K D
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 361 ITYRTVLDEICR 372
Y T++D CR
Sbjct: 733 FVYTTLVDGCCR 744
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 109/272 (40%), Gaps = 53/272 (19%)
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
G Y ++ + K+ A +F+ M R P + SY +L F G
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREM---RGKGIAPDVFSYGVLINGFSKLGN---- 642
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
M+ +F +MV +G+ P++ N ++ G+ S + A + +M V PN+
Sbjct: 643 ----MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNA 697
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL-- 348
+Y +I G C G A L DEMK KG VP S Y +LV +VE +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 349 -----------------W-----------EMIEK---------QRPVDFITYRTVLDEIC 371
W E++ + +P D +TY ++D +C
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND-VTYNIMIDYLC 816
Query: 372 RRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
+ G A +L ++QN NL+ TYT LL+
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 15/229 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ + L A + K M S CRP++ Y L FL N +
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASG---CRPNVVIYTTLIKTFLQ-------NSRFG 469
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
+ +R L K+M GI PDIF NS+I G + +++A +M V N L PN+F+Y
Sbjct: 470 DAMRVL-KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM--VENGLKPNAFTYG 526
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
I G +A + EM+ G +P+ L++ G+V E M+++
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D TY +++ + + + +A ++ +E++ K + D ++Y L++
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+Y++L L +G+N + + L +MV+ GI + + I +
Sbjct: 314 TYSLLIDGLL-KGRNA-------DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A +F M + +P + +Y LI G C + + EL EMK++ V S +Y ++V
Sbjct: 366 AKALFDGM-IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ +G+++ + EMI + + Y T++ + R G+AM++LKE++ + +
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 393 -DGYTYTKLL 401
D + Y L+
Sbjct: 485 PDIFCYNSLI 494
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME + LF M+ G+ P + S+I+GY +V + +M N + + ++Y
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYG 421
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ G+C+ G A + EM G P+ Y +L+ N + ++ L EM E+
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D Y +++ + + R EA L E+ L + +TY +
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 118/326 (36%), Gaps = 76/326 (23%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQM----LATPSFCGTEALYNTIIYFFAEARKLSR 191
DA TY ++ L + +++ +M +A F Y +I F++ + +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS-----YGVLINGFSKLGNMQK 645
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG--------------KNTYINHVYMET 237
A +F M P++ YN+L F G K + N V T
Sbjct: 646 ASSIFDEMVEEG---LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 238 I---RC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ----- 279
I C LF +M G+ PD F +++ G N V A+ IF
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 280 ------MGVVYNYL--------------------------PNSFSYDYLIHGLCAQGRTK 307
+ N++ PN +Y+ +I LC +G +
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A+EL +M+ +P+ +Y SL++ G E E I D I Y ++
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 368 DEICRRGRAGEAMKLLKELQNKNLID 393
+ + G +A+ L+ ++ KN +D
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVD 908
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 15/206 (7%)
Query: 172 TEALYNTII-YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
+ A +N +I + F + + + + M S + +P+ +YNI+ G
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN---- 820
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
+E + LF QM N + P + + S++ GY + +F + + P+
Sbjct: 821 ----LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-AIAAGIEPDH 875
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP-----SSKSYNSLVSALALNGEVEETV 345
Y +I+ +G T A L D+M K V S + +L+S A GE+E
Sbjct: 876 IMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAE 935
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEIC 371
K + M+ Q D T +++E C
Sbjct: 936 KVMENMVRLQYIPDSATVIELINESC 961
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 152/417 (36%), Gaps = 93/417 (22%)
Query: 66 LSRSSSRGVGKRSKADSKPA--LDDTQFRCAV--SELPPRFNNEELCNVMTLQ--EDPLV 119
L RS S V K S A ++ A L +R + S L N E + +V+ + +DP
Sbjct: 20 LFRSFSVNVEKLSDASAEIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSK 79
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--------------- 164
L FNW Q ++ + L +++ VV +M+
Sbjct: 80 LLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVR 139
Query: 165 ATPSFCGTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+ F G L+ + + + AV+VF +S LE P + +L A
Sbjct: 140 CSQEFVGKSDDGVLFGILFDGYIAKEYIEEAVFVFS---SSMGLELVPRLSRCKVLLDAL 196
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV----------- 270
L + VY K MV + D+ + + +I + + +V
Sbjct: 197 LRWNRLDLFWDVY--------KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTE 248
Query: 271 ----------NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+ AL++ M + +P ++YD LI GLC R ++A+ L EM G
Sbjct: 249 KEFRTATLNVDGALKLKESM-ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307
Query: 321 FVPSSKSYNSLVSAL-------ALNGEVEETV---------------------------K 346
+ +Y+ L+ L A G V E V K
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
Query: 347 NLWE-MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
L++ MI Y ++++ CR + +LL E++ +N+ I YTY ++
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 49/257 (19%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I F KL A+ +F M S N+ P + ++NIL AF G+ +
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKM-TSENI--NPDVYTFNILVDAFCKEGR--------V 296
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV-----YNYL 287
+ + M+ GI+PDI + NS++ GY L N VN A I + M GV YN +
Sbjct: 297 KEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIV 356
Query: 288 --------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
PN +Y+ LI GLC GR A EL D M +G
Sbjct: 357 INGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQ 416
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P +Y+S++ AL N V++ + L ++ ++ + TY ++D +C+ GR +A
Sbjct: 417 QPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARN 476
Query: 382 LLKELQNKNLIDGYTYT 398
+ ++L L+ GY T
Sbjct: 477 IFEDL----LVKGYNLT 489
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P+ ++NIL F G + V + ++ G EPD +LN+ IKG+ L
Sbjct: 102 KPNFVNFNILINCFCQLGLIPFAFSVLAKILKM--------GYEPDTITLNTFIKGFCLK 153
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++ AL FH V + + SY LI+GLC G T+ A EL + K
Sbjct: 154 GQIHQALN-FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVM 212
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y++++ ++ + V + EM+ ++ + +TY ++ C G+ +A+ L ++
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMT 272
Query: 388 NKNL-IDGYTYTKLLD 402
++N+ D YT+ L+D
Sbjct: 273 SENINPDVYTFNILVD 288
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 108/220 (49%), Gaps = 18/220 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + + + +A+ +FK M + + P++ +YN L G+ +Y
Sbjct: 353 YNIVINGFCKIKMVDQAMKLFKEMHHKQIF---PNVITYNSLIDGLCKSGRISYALE--- 406
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
L M + G +PDI + +S++ ++ V+ A+ + ++ G+ PN ++
Sbjct: 407 -----LIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGI----RPNMYT 457
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC GR ++AR + +++ KG+ + +Y ++ +G +E + L +M
Sbjct: 458 YTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMK 517
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ D ITY ++ + + +A KLL+E+ + L+
Sbjct: 518 DNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLL 557
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ LF++M GI+P+ + N +I + + A + ++ + Y P++ + +
Sbjct: 88 TVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKI-LKMGYEPDTITLNTF 146
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I G C +G+ A D++ GF SY +L++ L GE ++ L + K
Sbjct: 147 IKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLV 206
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+D + Y T++D +C+ +A L E+ ++ + TY+ L+
Sbjct: 207 QLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252
>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 484
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 134/296 (45%), Gaps = 13/296 (4%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHGSKKSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E L+ +I + +A + +V +F+ M+ L +I+S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKME---ELGVERTIKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y++LF L RG+ YM R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YDVLFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + + A + EMK + P+ + +L+
Sbjct: 170 NRFFEDMK-SRXITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
V++ ++ EM + ITY T+L +C + EA LKE+ +K
Sbjct: 229 GYVSVDRVDDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSXLKEMVDK 284
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 32/250 (12%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
PSF E +YN + ++K A+ F++++ S E R ++ L G
Sbjct: 7 VPSF-DHELVYNVL----HGSKKSEHALQFFRWVERSNLFEHN---RETHLKIIEIL--G 56
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
+ + +NH RC+ M G+E D MI Y + V +++++F +M GV
Sbjct: 57 RASKLNHA-----RCILLDMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKLFQKMEELGV 111
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
SYD L + +GR A+ ++M +G P+ ++N ++ L+G+VE
Sbjct: 112 ERTIK----SYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVE 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LI 392
+ +M + D ITY T+++ R + EA K E++ +N LI
Sbjct: 168 TANRFFEDMKSRXITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLI 227
Query: 393 DGYTYTKLLD 402
GY +D
Sbjct: 228 KGYVSVDRVD 237
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 14/270 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F + TY I+ M+ + ++ +M A ++ YN +IY + ++ A
Sbjct: 377 FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG-YNGMIYALCKDGRMDEA 435
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + + M R+ C P I SYN + N+ ME +F+ ++ +G+
Sbjct: 436 MGLIQEM---RSQGCNPDICSYNTIIYHL--------CNNEQMEEAEHMFENLLEEGVVA 484
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + N++I + DA+R+ +M +++ + SY+ LI +C G + L
Sbjct: 485 NGITYNTIIHALLRDGRWQDAVRLAKEM-ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+EM KG P++ SYN L+S L V + ++ +M+ + D +TY T+++ +C+
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
G A+ LL++L N+N+ D TY L+
Sbjct: 604 MGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 17/255 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA Y + L E ++N+ML G A NT L R
Sbjct: 209 DAVLYQTVIHALCDQGGVTEAATLLNEML----LMGCAADVNTFDDVVRGMCGLGRVREA 264
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ + C P + +Y L L R + + R + ++ E ++
Sbjct: 265 ARLVDRMMTKGCMPGVMTYGFLLQG-LCRVRQA-------DEARAMLGRVP----ELNVV 312
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
N++I G + + +A ++ MG+ P++ +Y L+HGLC GR +A L E
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGL-KGCQPDAHTYSILMHGLCKLGRISSAVRLLRE 371
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M++KGF P+ +Y ++ + NG ++T L EM K ++ Y ++ +C+ GR
Sbjct: 372 MEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR 431
Query: 376 AGEAMKLLKELQNKN 390
EAM L++E++++
Sbjct: 432 MDEAMGLIQEMRSQG 446
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 12/204 (5%)
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN-D 248
RA+++ + R +PS RSYN++ + L+R + + + L+++MV+ D
Sbjct: 120 GRALHLLDQLP--RRFGVQPSFRSYNVVLS-VLARAD------CHADAL-ALYRRMVHRD 169
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
+ P F+ + N+AL + M + +P++ Y +IH LC QG
Sbjct: 170 RVPPTTFTFGVAARALCRLGRANEALALLRGM-ARHGCVPDAVLYQTVIHALCDQGGVTE 228
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L +EM G +++ +V + G V E + + M+ K +TY +L
Sbjct: 229 AATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQ 288
Query: 369 EICRRGRAGEAMKLLKELQNKNLI 392
+CR +A EA +L + N++
Sbjct: 289 GLCRVRQADEARAMLGRVPELNVV 312
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 113/296 (38%), Gaps = 53/296 (17%)
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEAR-- 187
QP FR +Y+++ L A + + + +M+ + + T F AR
Sbjct: 136 QPSFR----SYNVVLSVLARADCHADALALYRRMVHR------DRVPPTTFTFGVAARAL 185
Query: 188 -KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
+L RA ++ C P Y + A +G T L +M+
Sbjct: 186 CRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT--------EAATLLNEML 237
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC----- 301
G D+ + + +++G V +A R+ +M + +P +Y +L+ GLC
Sbjct: 238 LMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM-MTKGCMPGVMTYGFLLQGLCRVRQA 296
Query: 302 --------------------------AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
A+G+ A EL + M KG P + +Y+ L+ L
Sbjct: 297 DEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
G + V+ L EM +K + +TY VL C+ G + LL+E+ K L
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 412
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G++P S N ++ ++ DAL ++ +M P +F++ LC GR
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L M R G VP + Y +++ AL G V E L EM+ D T+ V+
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
+C GR EA +L+ + K + G TY LL L
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 290
>gi|356574070|ref|XP_003555175.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 720
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 35/334 (10%)
Query: 83 KPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHI 142
KP D ++F ++ L + + L + D + +F WAS+Q F H ++TY
Sbjct: 36 KPK-DSSEFDQNLNFLKNKLAPDNLIRALDRTSDLNSAVRIFKWASRQKSFHHTSNTYFR 94
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS 202
+ KLG A EM D M+ EAL +++ F ++ A+ V M
Sbjct: 95 IILKLGMAGKVLEMRDFCEYMVKDRCPGAEEALV-ALVHTFVGHHRIKEAIAVLVNMNLG 153
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYIN--HVYMETIR-CL------------------ 241
RP I +N+L A + R + + VY E ++ C+
Sbjct: 154 GY---RPPIEVFNVLLGALVGRESRDFQSALFVYKEMVKACVLPTVDTLNYLLEVLFATN 210
Query: 242 --------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
F++M N G +P+ + ++KG I S V++A + QM + + P+ Y
Sbjct: 211 RNELALHQFRRMNNKGCDPNSKTFEILVKGLIESGQVDEAATVLEQM-LKHKCQPDLGFY 269
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+I C + + + A +L MK FVP S Y LV N +++ V + EMIE
Sbjct: 270 TCIIPLFCRENKVEEAVKLFKMMKDSDFVPDSFIYEVLVRCFCNNLQLDSAVSLINEMIE 329
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
P +++ C G+ EA+ L++ Q
Sbjct: 330 IGMPPKHNVLVDMMNCFCELGKINEAIMFLEDTQ 363
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 21/273 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE-ALYNTIIYFFAEARKLSRAVY 194
++ T+ I+ + L + E V+ QML C + Y II F K+ AV
Sbjct: 230 NSKTFEILVKGLIESGQVDEAATVLEQMLKHK--CQPDLGFYTCIIPLFCRENKVEEAVK 287
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+FK MK+S + P Y +L F N++ +++ L +M+ G+ P
Sbjct: 288 LFKMMKDS---DFVPDSFIYEVLVRCF--------CNNLQLDSAVSLINEMIEIGMPPKH 336
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
L M+ + +N+A+ +F + V+ P ++ L+ G C G A L +
Sbjct: 337 NVLVDMMNCFCELGKINEAI-MFLEDTQVHETAP----FNTLLEGCCNAGEVLAANVLLE 391
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M + + +S+N L+ L N E + L MI+ +D TY ++ CR G
Sbjct: 392 TMSERN-IADCQSWNILIRWLCENEETNKAYILLGRMIKSFVILDHATYSALVVGKCRLG 450
Query: 375 RAGEAMKLLKELQNKN-LIDGYTYTKLLDVLED 406
+ EAM+L ++ + ++D +Y++L+ L D
Sbjct: 451 KYEEAMELFHQIYARCWVLDFASYSELVGGLSD 483
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 109/257 (42%), Gaps = 24/257 (9%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF---FAE 185
K F D+ Y ++ R ++N+M+ G +N ++ F E
Sbjct: 293 KDSDFVPDSFIYEVLVRCFCNNLQLDSAVSLINEMIEI----GMPPKHNVLVDMMNCFCE 348
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
K++ A+ ++++++ E P +N L + G+ N V +ET M
Sbjct: 349 LGKINEAIM---FLEDTQVHETAP----FNTLLEGCCNAGEVLAAN-VLLET-------M 393
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
I D S N +I+ + N A + +M + L ++ +Y L+ G C G+
Sbjct: 394 SERNI-ADCQSWNILIRWLCENEETNKAYILLGRMIKSFVILDHA-TYSALVVGKCRLGK 451
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
+ A EL ++ + +V SY+ LV L+ ++ ++ M K+ + +++
Sbjct: 452 YEEAMELFHQIYARCWVLDFASYSELVGGLSDIKHSQDAIEVFHYMSMKRCSLHSLSFYK 511
Query: 366 VLDEICRRGRAGEAMKL 382
++ +C G+ +A++L
Sbjct: 512 LIKCVCDSGQVNQAIRL 528
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 134/306 (43%), Gaps = 47/306 (15%)
Query: 134 RHDASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA 186
+ D TY + L A +++EM+ T + YN+++ +A
Sbjct: 202 KADVFTYSTIIDSLCRDGCIDAAISLFKEME--------TKGIKSSLVTYNSLVGGLCKA 253
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR------- 239
K + V + K M + + + P++ ++N+L F+ GK N +Y E I
Sbjct: 254 GKWNDGVQLLKDMTSRKII---PNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNT 310
Query: 240 ----------CL----------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
C+ MV + PDI + S+IKGY V++ +++F +
Sbjct: 311 ITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRK 370
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
+ + N+ +Y L+ G C G+ + A EL EM G +P +Y L+ L NG
Sbjct: 371 ISK-RGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNG 429
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYT 398
++E+ ++ ++ + + +D + Y +++ +C+ G+ +A L L K + + TYT
Sbjct: 430 KLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 489
Query: 399 KLLDVL 404
++ L
Sbjct: 490 VMISGL 495
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 112/254 (44%), Gaps = 32/254 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
+NT+I K+S AV + M + C+P++ +YN + G
Sbjct: 138 FNTLINGLCLESKVSEAVVLVARMVEN---GCQPNVVTYNSIVNGICKSGDTSLALDLLR 194
Query: 227 --------------NTYINHVY----METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+T I+ + ++ LFK+M GI+ + + NS++ G +
Sbjct: 195 KMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAG 254
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
ND +++ M +PN +++ LI +G+ + A EL EM KG P++ +Y
Sbjct: 255 KWNDGVQLLKDM-TSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITY 313
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
NSL+ + + E L M+ D +T+ +++ C+ R E MKL +++
Sbjct: 314 NSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISK 373
Query: 389 KNLI-DGYTYTKLL 401
+ L+ + TY+ L+
Sbjct: 374 RGLVANTVTYSILV 387
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 12/200 (6%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ +F+ M SR L PS+ ++ F+ S + + K+M +GI
Sbjct: 49 AIDLFQEMIRSRPL---PSLVDFSRFFSGVASTKQFNLVLD--------FCKKMELNGIA 97
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+I++LN MI + A + ++ + Y P++ +++ LI+GLC + + A
Sbjct: 98 HNIYTLNIMINCFCRCCKTCFAYSVLGKV-MKLGYEPDTTTFNTLINGLCLESKVSEAVV 156
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L M G P+ +YNS+V+ + +G+ + L +M E+ D TY T++D +C
Sbjct: 157 LVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLC 216
Query: 372 RRGRAGEAMKLLKELQNKNL 391
R G A+ L KE++ K +
Sbjct: 217 RDGCIDAAISLFKEMETKGI 236
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 86/156 (55%), Gaps = 2/156 (1%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G EPD + N++I G L + V++A+ + +M V PN +Y+ +++G+C G T
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLVARM-VENGCQPNVVTYNSIVNGICKSGDTSL 188
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L +M + +Y++++ +L +G ++ + EM K +TY +++
Sbjct: 189 ALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVG 248
Query: 369 EICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
+C+ G+ + ++LLK++ ++ +I + T+ L+DV
Sbjct: 249 GLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ ++I + + +++ + +F+ + + R L + +Y+IL F GK +
Sbjct: 348 FTSLIKGYCKVKRVDEGMKLFRKI-SKRGL--VANTVTYSILVQGFCQSGK--------L 396
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF++MV+ G+ PD+ + ++ G + + AL IF + L + Y
Sbjct: 397 EIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNL-DIVMYTI 455
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C G+ ++A L + KG P+ +Y ++S L G + E L +M E
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ TY T++ R G + KL++E+++
Sbjct: 516 NEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 548
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 12/193 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ ++ F ++ KL A +F+ M + L P + +Y IL GK +
Sbjct: 383 YSILVQGFCQSGKLEIAEELFQEMVS---LGVLPDVMTYGILLDGLCDNGK--------L 431
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +F+ + + DI +I+G V DA +F + PN +Y
Sbjct: 432 EKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPC-KGVKPNVMTYTV 490
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC +G A L +M+ G P+ +YN+L+ A +G++ + K + EM
Sbjct: 491 MISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 550
Query: 356 RPVDFITYRTVLD 368
D + + V+D
Sbjct: 551 FSADASSIKMVID 563
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 16/217 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
++LF SK+ + TY I+ + + + +++ +M++ Y ++
Sbjct: 365 MKLFRKISKRG-LVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMT-YGILL 422
Query: 181 YFFAEARKLSRAVYVFKYMKNSR-NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ KL +A+ +F+ ++ S+ NL+ I Y I+ GK +E
Sbjct: 423 DGLCDNGKLEKALEIFEDLQKSKMNLD----IVMYTIIIEGMCKGGK--------VEDAW 470
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
LF + G++P++ + MI G +++A + +M N PN +Y+ LI
Sbjct: 471 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNE-PNDCTYNTLIRA 529
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
G + +L +EMK GF + S ++ L+
Sbjct: 530 HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLS 566
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 144/331 (43%), Gaps = 24/331 (7%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY 153
++ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 2 SIRNLVPSFDHELVYNVLHGSKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKL 61
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
++ M E ++ +I + +A + +V +F+ M+ L + +S
Sbjct: 62 NHARCILLDM-PKKGLEWDEDMWVLMIDSYGKAGIVQESVKLFQKME---ELGVERTTKS 117
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y+ LF L RG+ +M R F +M+++GIEP + N MI G+ LS V A
Sbjct: 118 YDTLFKVILRRGR-------FMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETA 169
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R F M P+ +Y+ +I+G + A + EMK + P+ +Y +L+
Sbjct: 170 NRFFDDMK-SREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIK 228
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK---- 389
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K
Sbjct: 229 GYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAP 288
Query: 390 -------NLIDGYTYTKLLDVLEDDFGNSIR 413
LI G T LD D IR
Sbjct: 289 TDNSIFMRLISGQCKTGNLDAAADVLKAMIR 319
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSR---EISPDVITYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y M+ F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
Y PN+ +Y L+ GLC + AR + EM K P+ S + L+S G
Sbjct: 247 K-GYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISGQCKTG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ + +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKADQHDKAVKLLDKLIEKDII 358
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 154/373 (41%), Gaps = 65/373 (17%)
Query: 97 ELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEM 156
ELP + + ++ +++P L +F+ A + P + H +H + R+L K+ +
Sbjct: 3 ELPKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHV 62
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
+V+ M A C +E + + I +A+ +A+ +F+ M + C P IRS+N
Sbjct: 63 GRIVDLMRAQRCTC-SEDVALSAIKAYAKCSMPDQALNLFQNMVDI--FGCNPGIRSFNS 119
Query: 217 LFTAFL--SRGKNTYINHVYMET---------------IRC----------LFKQMVNDG 249
+ AF+ ++ + + Y +T I C L M +G
Sbjct: 120 MLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENG 179
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV--------VYNYLPNSF---------- 291
+ PDI S ++I S ++ DA+ +F +M V YN L + F
Sbjct: 180 LNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKAN 239
Query: 292 -----------------SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+Y+ +I+GLC G+ + E+ + MK+ P +++S++
Sbjct: 240 EIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHG 299
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
L+ G K EMIE D TY +L + R G+ + +L + N +
Sbjct: 300 LSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNI 359
Query: 395 YTYTKLLDVLEDD 407
+Y L+ L D+
Sbjct: 360 VSYNMLIQGLLDN 372
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 133/276 (48%), Gaps = 20/276 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y M L M ++ ++++QM + ++N++I + A KL A+ V
Sbjct: 428 DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSH-VFNSLINGYVRAFKLEEAISV 486
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAF--LSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ MK+ +C P++ SYN + R + Y++ K+M+ +G++PD
Sbjct: 487 LREMKSK---DCAPTVVSYNTIINGLCKAERFSDAYLS----------LKEMLEEGLKPD 533
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ + + +I G V+ AL ++HQ + P+ ++ +IHGLC + A E+
Sbjct: 534 MITYSLLIDGLCRGEKVDMALNLWHQC-INKRLKPDLQMHNIIIHGLCTAQKVDVALEIF 592
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE-MIEKQRPVDFITYRTVLDEICR 372
+M++ VP ++N+++ L G+ E +K +W+ ++E D I+Y +C
Sbjct: 593 TQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALK-IWDRILEAGLQPDIISYNITFKGLCS 651
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLEDD 407
R +A++ L + ++ ++ + T+ L+ + DD
Sbjct: 652 CARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDD 687
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 20/299 (6%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
LC + L E +E++N K + D T+ M L A + + V +M+ +
Sbjct: 265 LCKLGKLDES----MEMWNRMKKNEK-SPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIES 319
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
YN ++ KL++ ++ M S+N C +I SYN+L L K
Sbjct: 320 -GLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM--SKNNCC--NIVSYNMLIQGLLDNKK 374
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
+E C ++ + G++ D + +I G + ++N ALRI +
Sbjct: 375 --------VEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGAD 426
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
L ++F+Y ++HGLC +G + A EL +MK+ +S +NSL++ ++EE +
Sbjct: 427 L-DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAIS 485
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
L EM K ++Y T+++ +C+ R +A LKE+ + L D TY+ L+D L
Sbjct: 486 VLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGL 544
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 120/256 (46%), Gaps = 14/256 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ M L + ++ N M + + C YN +I + +K+ +A+
Sbjct: 324 DVRTYNAMLSGLFRTGKLNKCFELWNVM--SKNNCCNIVSYNMLIQGLLDNKKVEQAICY 381
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
++ + + R L+ + +Y +L KN Y+N + +R L ++ N+G + D F
Sbjct: 382 WQLL-HERGLKADST--TYGLLINGLC---KNGYLN----KALRIL-EEAENEGADLDTF 430
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +SM+ G + A+ + HQM L NS ++ LI+G + + A + E
Sbjct: 431 AYSSMVHGLCKKGMLEQAVELIHQMKKNRRKL-NSHVFNSLINGYVRAFKLEEAISVLRE 489
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
MK K P+ SYN++++ L + +L EM+E+ D ITY ++D +CR +
Sbjct: 490 MKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEK 549
Query: 376 AGEAMKLLKELQNKNL 391
A+ L + NK L
Sbjct: 550 VDMALNLWHQCINKRL 565
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 11/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I EA + A VF +KN+ C P + +YN L A+ GK+ I+ ++
Sbjct: 790 YNLLIGGLLEADMIEIAQDVFLQVKNTG---CIPDVATYNFLLDAY---GKSGKIDELFE 843
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++K+M EP+ + N +I G + + +V+DAL +++ + ++ P + +Y
Sbjct: 844 -----IYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 898
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GL GR A++L + M G P+ YN L++ GE + M+++
Sbjct: 899 LIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 958
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D TY ++D +C GR E + +EL+ L
Sbjct: 959 VRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGL 994
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 12/225 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +Y A+A + A +F +K+ + P +YN++ + G+ E
Sbjct: 474 NASLYSLAKAGRDREAKQIFYGLKD---IGLVPDSVTYNMMMKCYSKVGEID-------E 523
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
I+ L +MV + EPD+ +NS+I ++ V++A ++F +M + P +Y+ L
Sbjct: 524 AIK-LLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM-KLKPTVVTYNTL 581
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ GL G+ + A EL + M +KG P++ ++N+L L N EV +K L++M++
Sbjct: 582 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 641
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
D TY T++ + + G+ EAM +++ D T LL
Sbjct: 642 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL 686
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T++I+ L A + D+ +++ F T Y +I +++ +L A +F+
Sbjct: 859 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 918
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + CRP+ YNIL F G+ + LFK+MV +G+ PD+ + +
Sbjct: 919 MSD---YGCRPNCAIYNILINGFGKAGE--------ADAACALFKRMVKEGVRPDLKTYS 967
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++ + V++ L F ++ P+ Y+ +I+GL R + A L +EMK+
Sbjct: 968 VLVDCLCMVGRVDEGLHYFRELKE-SGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKK 1026
Query: 319 -KGFVPSSKSYNSLVSALALNGEVEETVK 346
+G P +YNSL+ L + G VEE K
Sbjct: 1027 SRGITPDLYTYNSLILNLGIAGMVEEAGK 1055
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 111/228 (48%), Gaps = 15/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I+ ++R + A+ V++ M RPS+++Y+ L R +
Sbjct: 193 YNGLIHLLLKSRFCTEAMEVYRRMILDG---FRPSLQTYSSLMVGLGKRRD--------I 241
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E++ L K+M G++P++++ I+ + +N+A I +M P+ +Y
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD-EGCGPDVVTYTV 300
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI LC + A+E+ +MK P +Y +L+ + N +++ +V W +EK
Sbjct: 301 LIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLD-SVNQFWSEMEKD 359
Query: 356 RPV-DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
V D +T+ ++D +C+ G GEA L ++++ ++ +TY L+
Sbjct: 360 GHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLI 407
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 136/334 (40%), Gaps = 72/334 (21%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSR 191
+ + T+ I R LG A E +++ +M CG + + Y +I ARKL
Sbjct: 256 LKPNVYTFTICIRVLGRAGKINEAYEILKRM--DDEGCGPDVVTYTVLIDALCTARKLDC 313
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET-------------- 237
A VF MK R+ +P +Y L F +N + E
Sbjct: 314 AKEVFAKMKTGRH---KPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTI 370
Query: 238 -IRCLFKQ------------MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
+ L K M + GI P++ + N++I G + + ++DAL IF M G
Sbjct: 371 LVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLG 430
Query: 282 V---VYNYL----------------------------PNSFSYDYLIHGLCAQGRTKNAR 310
V Y Y+ PN + + ++ L GR + A+
Sbjct: 431 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 490
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
++ +K G VP S +YN ++ + GE++E +K L EM+E D I ++++ +
Sbjct: 491 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTL 550
Query: 371 CRRGRAGEAMKL---LKELQNKNLIDGYTYTKLL 401
+ R EA K+ +KE++ K + TY LL
Sbjct: 551 YKADRVDEAWKMFMRMKEMKLKPTV--VTYNTLL 582
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A+YN +I F +A + A +FK M RP +++Y++L G+ H
Sbjct: 929 AIYNILINGFGKAGEADAACALFKRMVKEG---VRPDLKTYSVLVDCLCMVGRVDEGLH- 984
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
F+++ G+ PD+ N +I G + + +AL +F++M P+ ++Y
Sbjct: 985 -------YFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTY 1037
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+ LI L G + A ++ +E++R G P+ ++N+L+ +L+G+ E
Sbjct: 1038 NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1086
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN II + +L A+ +F MK SR + P + +YN L G +Y
Sbjct: 1001 YNLIINGLGKFHRLEEALVLFNEMKKSRGIT--PDLYTYNSLILNLGIAGMVEEAGKIYN 1058
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R G+EP++F+ N++I+GY LS A ++ M V + PN+ +Y+
Sbjct: 1059 EIQRA--------GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM-VTGGFSPNTGTYEQ 1109
Query: 296 L 296
L
Sbjct: 1110 L 1110
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
F+ F S N+ + H ET + + + DG ++ + +++ I+ N L IF
Sbjct: 104 FSYFKSVAGNSNLVHT-TETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIF 162
Query: 278 HQMGVV---------------YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
+ V + ++ N++SY+ LIH L A E+ M GF
Sbjct: 163 KCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFR 222
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
PS ++Y+SL+ L ++E + L EM + T+ + + R G+ EA ++
Sbjct: 223 PSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 282
Query: 383 LKELQNKNL-IDGYTYTKLLDVL 404
LK + ++ D TYT L+D L
Sbjct: 283 LKRMDDEGCGPDVVTYTVLIDAL 305
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 243 KQMVNDGIEPDIFS-LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+++V +GI D S L +I+ N+ + A +F + P +Y+ LI GL
Sbjct: 739 ERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLL 798
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+ A+++ ++K G +P +YN L+ A +G+++E + EM + + I
Sbjct: 799 EADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTI 858
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLID--GYTYTKLLDVL 404
T+ V+ + + G +A+ L +L + TY L+D L
Sbjct: 859 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 903
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 143/349 (40%), Gaps = 53/349 (15%)
Query: 103 NNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQ 162
+ E + ++ Q+ LE F WAS P F H STY + KL + + + ++++
Sbjct: 35 SQEHVSQLILDQKSASEALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDE 94
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
M + + ++ TII AR ++R V K + PS++ +N + +
Sbjct: 95 MPHSLGAPPGDDIFITIIRGLGRAR-MTRTV--IKVLDLVYKFHGSPSLKIFNSILDVLV 151
Query: 223 SRGKNTYINHVYMETIRCLF-KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM- 280
++ R + K M+ G+E D ++ ++KG L+N + + ++ +
Sbjct: 152 KED---------IDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIK 202
Query: 281 -------GVVYNYL----------------------PNSFSYDYLIHGLCAQGRTKNARE 311
VVYN L PN +++ LI G C +G + A
Sbjct: 203 SRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMEDPNDVTFNILISGYCKEGNSVQALV 262
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L ++ GFVP S ++ L G E + L + +D + Y T++ C
Sbjct: 263 LLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFC 322
Query: 372 RRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVLEDDFGN 410
G+ + LK+++NK LI G++ + +LD+ D F +
Sbjct: 323 GAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFND 371
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 118/268 (44%), Gaps = 16/268 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+ TY+++ + M D+ N M T ++T+I ++ +
Sbjct: 345 NVDTYNVLISGFSESGMLDLALDLFNDM-KTDGIKWNFVTFDTLIRGLCSEERIEDGFSI 403
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV-YMETIRCLFKQMVNDGIEPDI 254
+ M+ S+ R I YN + L KN + ++ + LF + V+ +
Sbjct: 404 LELMEESKE-GSRGHISPYNSIIYGLLK--KNGFDESAEFLTKMGNLFPRAVDRSL---- 456
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
MI + + DA R++ QM + +P+ Y+ L+HG QG + A EL +
Sbjct: 457 -----MILEHCKKGAIEDAKRVYDQM-IDEGGIPSILVYNCLVHGFSKQGNVREAVELMN 510
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM P ++N++++ G+VE +K + ++ + + TY ++D +CR G
Sbjct: 511 EMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNG 570
Query: 375 RAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+AM++ ++ +K ++ D + + LL
Sbjct: 571 DLQKAMQVFMQMVDKGILPDLFIWNSLL 598
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PSI YN L F +G E + L +M+ + P + N++I G+
Sbjct: 484 PSILVYNCLVHGFSKQGN-------VREAVE-LMNEMIANNCFPIPSTFNAVITGFCRQG 535
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V AL++ + +PN+ +Y LI LC G + A ++ +M KG +P +
Sbjct: 536 KVESALKLVEDI-TARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIW 594
Query: 329 NSLVSALA 336
NSL+ +L+
Sbjct: 595 NSLLLSLS 602
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 109/271 (40%), Gaps = 37/271 (13%)
Query: 113 LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT 172
++ED + E + + D T+ I+ + L E ++ Q++ +
Sbjct: 151 VKEDIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLL-QLIKSRGVAPN 209
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN----- 227
+YNT+++ K+ RA + M++ P+ ++NIL + + G +
Sbjct: 210 TVVYNTLLHALCRNGKVGRARNLMNEMED-------PNDVTFNILISGYCKEGNSVQALV 262
Query: 228 -----------------TYINHVYMETIRCLFKQMVNDGIEP-----DIFSLNSMIKGYI 265
T + + R + V + +E D+ + N++IKG+
Sbjct: 263 LLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFC 322
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V L QM LPN +Y+ LI G G A +L ++MK G +
Sbjct: 323 GAGKVKVGLHFLKQMEN-KGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNF 381
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
++++L+ L +E+ ++ E++E+ +
Sbjct: 382 VTFDTLIRGLCSEERIEDGF-SILELMEESK 411
>gi|296081308|emb|CBI17752.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 140/309 (45%), Gaps = 29/309 (9%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV--VNQML 164
+ V+ +Q DP++C + F+WA KQ ++H+ ++Y+ L + ++ D V + M
Sbjct: 122 VAEVLKVQTDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQ 181
Query: 165 ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR 224
P +E + +I +A + R YV++ MK +P + YN + +
Sbjct: 182 GKPP---SEKQFEILIRMHIDANRGLRVYYVYEKMKK---FGIKPRVFLYNRIMDGLVKT 235
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-GVV 283
G +++ +++ DG+ + + ++KG + +++ L + +M G +
Sbjct: 236 G--------HLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLELLDRMRGNL 287
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
P+ F+Y ++ L A+G + +EM++ P +Y +LV+AL V E
Sbjct: 288 CK--PDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGE 345
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK----------NLID 393
+ EM +K+ +D Y ++++ R G A LLK+L + +LI+
Sbjct: 346 GFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIE 405
Query: 394 GYTYTKLLD 402
G K +D
Sbjct: 406 GMCNVKQVD 414
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 96/227 (42%), Gaps = 14/227 (6%)
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
V + L +C ++YN ++ ++ +A+ +F +K+S +P +Y+
Sbjct: 489 VFEHLKAKGYCSI-SIYNILMEAIHRTGEVKKALSLFDDIKDSN---FKPDSSTYSNAII 544
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
F+ G E C + +++ P + + S++KG S ++ A+ +
Sbjct: 545 CFVEVGD-------VQEACAC-YNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRD 596
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
P F Y I C G + ++ +EM ++G P +Y++L+S + +G
Sbjct: 597 CLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKHG 656
Query: 340 EVEETVKNLWEMIEKQ--RPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+EE K M E++ + I Y +L E ++ A + LK
Sbjct: 657 TLEEARKVFSNMRERKLLTEANVIVYDEILIEHMKKKTADLVLSGLK 703
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 102/245 (41%), Gaps = 22/245 (8%)
Query: 154 QEMDDVVN-----QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
+ MDD + Q L P ++ +I + +L A+ VF+++K
Sbjct: 446 KRMDDFCSLLGQMQKLGFPVIDDLSKFFSVMI---EKGERLKLALEVFEHLKAKGYC--- 499
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
SI YNIL A G+ ++ LF + + +PD + ++ I ++
Sbjct: 500 -SISIYNILMEAIHRTGE--------VKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVG 550
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC-DEMKRKGFVPSSKS 327
V +A ++++ + LP+ +Y L+ GLC A L D + P
Sbjct: 551 DVQEACACYNKI-IEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFK 609
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y + +G E+ + L EM+++ D +TY ++ +C+ G EA K+ ++
Sbjct: 610 YTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFSNMR 669
Query: 388 NKNLI 392
+ L+
Sbjct: 670 ERKLL 674
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 17/252 (6%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
D +M+ + F YN +I + A+ VF M + C PS+ +Y+IL
Sbjct: 145 DAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRG---CSPSVVTYSIL 201
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
A T Y + + L +M + G EPDI + N +I V +AL++
Sbjct: 202 LDA-------TCKESGYKQAV-VLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVL 253
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+ + Y P++ +Y ++ LC+ R + A +L +M P ++N+++++L
Sbjct: 254 NSLPS-YGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQ 312
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL----QNKNLI- 392
G V K L +M E D ITY +++D +C+ R EA+KLLKEL +KN I
Sbjct: 313 KGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIP 372
Query: 393 DGYTYTKLLDVL 404
D T+ ++ L
Sbjct: 373 DQVTFNTIITSL 384
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 16/197 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ NIL + G+ V +E + G I + N+M+ GY +
Sbjct: 94 PAVIPCNILIKKLCADGRVADAERV-VEAL----------GPSATIITYNTMVNGYCRAG 142
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++ A R+ + + P++F+Y+ LI LC +G +A + D+M +G PS +Y
Sbjct: 143 NIDAARRMIDSV----PFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTY 198
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ L+ A ++ V L EM K D +TY +++ +C +G GEA+K+L L +
Sbjct: 199 SILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPS 258
Query: 389 KNL-IDGYTYTKLLDVL 404
D TYT +L L
Sbjct: 259 YGCKPDAVTYTPVLKSL 275
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 123/278 (44%), Gaps = 24/278 (8%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKL 189
F D TY+ + R L + V + ML +PS Y+ ++ +
Sbjct: 156 FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSV----VTYSILLDATCKESGY 211
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
+AV + M R+ C P I +YN+L A S+G E ++ + + + G
Sbjct: 212 KQAVVLLDEM---RSKGCEPDIVTYNVLINAMCSQGD-------VGEALK-VLNSLPSYG 260
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+PD + ++K S +A ++ +M + P+ +++ +I LC +G A
Sbjct: 261 CKPDAVTYTPVLKSLCSSERWEEADKLLTKM-FSNDCAPDEVTFNAVITSLCQKGFVGRA 319
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL----WEMIEKQRPVDFITYRT 365
++ +M G P +Y+S++ L V+E +K L EM+ K D +T+ T
Sbjct: 320 TKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNT 379
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
++ +C++G A+K++ E+ I D TY ++D
Sbjct: 380 IITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVD 417
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 117/262 (44%), Gaps = 20/262 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF-CGTEAL-YNTIIYFFAEARKLSRAV 193
D TY+++ + + E V+N + PS+ C +A+ Y ++ + + A
Sbjct: 229 DIVTYNVLINAMCSQGDVGEALKVLNSL---PSYGCKPDAVTYTPVLKSLCSSERWEEAD 285
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ M ++ +C P ++N + T+ +G ++ + QM G PD
Sbjct: 286 KLLTKMFSN---DCAPDEVTFNAVITSLCQKG--------FVGRATKVLAQMSEHGCTPD 334
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
I + +S++ G V++A+++ ++ V N +P+ +++ +I LC +G A
Sbjct: 335 IITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAI 394
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSA-LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
++ DEM G +P +YN +V L + + EE + L M+ D TY+++
Sbjct: 395 KVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFG 454
Query: 370 ICRRGRAGEAMKLLKELQNKNL 391
+ R A+ + + +Q L
Sbjct: 455 LSREDEMERAIGMFRRVQAMGL 476
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 42/295 (14%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
F WA+++P F HD+ TYH M L A+ ++ M ++ +M T ++ +
Sbjct: 126 FFCWAAEKPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKRLL--TLDTFSIAMRA 183
Query: 183 FAEARKLSRAVYVFKYMKNSR-----------------------------NLECR--PSI 211
FA A++ +AV +F+ MKN + LE R P++
Sbjct: 184 FAAAKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPNL 243
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
R+Y +L + R KN ME R ++ +M+++G +PDI + N M++G + S +
Sbjct: 244 RTYTVLLNGW-CRVKN------LMEAGR-IWNEMLDEGFKPDIVTHNIMLEGLLRSKKRS 295
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
DA++ F M P+ SY LI LC Q + K A EM G P + Y L
Sbjct: 296 DAIKFFEVMK-AKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCL 354
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++ + ++ + L EM EK P D TY ++ + + +A+++ K++
Sbjct: 355 MTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKM 409
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 113/287 (39%), Gaps = 22/287 (7%)
Query: 108 CNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATP 167
C V L E + E+ + F+ D T++IM L +K + M A
Sbjct: 254 CRVKNLMEAGRIWNEMLDEG-----FKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKG 308
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
+ Y +I + K+ AV F M +S C P Y L T
Sbjct: 309 PSPDVRS-YTILIRDLCKQTKMKEAVGYFYEMVDS---GCHPDAAVYTCLMTG------- 357
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
Y NH M+ + L K+M G PD + N++IK +DA+RI+ +M +
Sbjct: 358 -YGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKM-IQNGIE 415
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+ SY+ ++ + + DEM +KGF P SY + L G EE K
Sbjct: 416 PSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKY 475
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
L EMIEK + Y + R G+ +L+EL K G
Sbjct: 476 LEEMIEKGMKAPQLDYNKFAADFSRAGKP----DILEELAQKMKFSG 518
>gi|356523086|ref|XP_003530173.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17670-like [Glycine max]
Length = 456
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 142/313 (45%), Gaps = 23/313 (7%)
Query: 100 PRFNNEELCNVMTLQEDPLVCLELFNWASKQ-PRFRHDASTYHIM-TRKLGAAKMYQEMD 157
PRF N L + L P ++ FN +K P F D ST+HI+ + + + +
Sbjct: 76 PRFPNSLLHSYAKLATTPSDSIKFFNHITKTLPSFSPDRSTFHILLSHASNNSNLLSPIH 135
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
+N MLA A + + A +L AV + K + C P ++N L
Sbjct: 136 QXLNLMLAA-GITPDTATADVAVRSLCSAGRLDHAVELIKEFASK---HCPPDTYTFNFL 191
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN--DALR 275
L + + +++ +R F ++PD+ + +I ++N +A+R
Sbjct: 192 -VKHLCKSSTITTVYAFIDEMREKFD------VKPDLVTYTILIDNVCNGKNLNLREAMR 244
Query: 276 ---IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
+ H+ G + + F Y+ ++ G C R A E+ ++MK +G P +YN+L+
Sbjct: 245 LVSVLHEEG----FKLDCFVYNTIMKGYCVLSRGSEAIEVYNKMKEEGVEPDLVTYNTLI 300
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
L+ +G V E K L M EK D +TY ++++ +CR+G A A+ LL E++ K
Sbjct: 301 FGLSKSGRVTEARKLLRVMAEKGYFPDEVTYTSLMNGLCRKGDALGALALLGEMEAKGCS 360
Query: 392 IDGYTYTKLLDVL 404
+ TY LL L
Sbjct: 361 PNACTYNTLLHGL 373
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 78/192 (40%), Gaps = 12/192 (6%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YNTI+ + + S A+ V+ MK P + +YN L G+ T
Sbjct: 260 VYNTIMKGYCVLSRGSEAIEVYNKMKEE---GVEPDLVTYNTLIFGLSKSGRVT------ 310
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
R L + M G PD + S++ G AL + +M PN+ +Y+
Sbjct: 311 --EARKLLRVMAEKGYFPDEVTYTSLMNGLCRKGDALGALALLGEMEA-KGCSPNACTYN 367
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+HGLC + A + ++ G + SY + V AL +G + E + +E
Sbjct: 368 TLLHGLCKARLVEKAVKFYQVIRAGGLKLDTASYGTFVRALCRDGRIAEAYEVFDYAVES 427
Query: 355 QRPVDFITYRTV 366
+ D Y T+
Sbjct: 428 KSLTDVAAYSTL 439
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 15/260 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ ++ T +I+ ++L AA ++ D++N ML F T + ++ +A SR
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM-GFHPTPTTHKAVL----DASSKSRR 521
Query: 193 VYVFKYMKNSR-NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
V +M + + + + +YN L + F G + +FK M+ GI
Sbjct: 522 ADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLG--------MIRRATLVFKDMMGKGIL 573
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
DI + N++I GY +S+H+ A + QM + PN +Y+ L+ GL A K A
Sbjct: 574 ADIITYNALIHGYCISSHLKKAFAVHSQM-LTEGVSPNVETYNILLGGLSAARLIKEAAG 632
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L ++MK +G VP++ +Y+ LVS G ++E VK EMI K TY ++
Sbjct: 633 LVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFA 692
Query: 372 RRGRAGEAMKLLKELQNKNL 391
+ + +A +L++E+Q + +
Sbjct: 693 KGKKMSQAKELMQEMQVRGI 712
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + ++SRAV + + MK P I +YN L F G +
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGP---APDIVTYNTLMNGFCKIGD--------L 68
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
T + L ++ +EP++ + ++I Y S + DAL ++ +M V + +P+ +Y
Sbjct: 69 FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEM-TVKSLVPDVVTYTC 127
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+++GLC G+ + A+ + EM+ G VP+ SY +L+ +L G V E M+ +
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG 187
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
D + Y ++D + + G A A + + L ++L+ TY+ L+D
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALID 235
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 129/314 (41%), Gaps = 90/314 (28%)
Query: 175 LYNTII--YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+Y T+I YF A+ R + A+ +FK MK SR LE N + +F++ K +
Sbjct: 299 VYGTLIDGYFKADQRGI--ALDLFKEMK-SRGLE------ENNFVIDSFVNNLKRSG--- 346
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVY 284
ME LFK M++ G+ PD + SM+ G+ + +DA I +M V Y
Sbjct: 347 -RMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAY 405
Query: 285 NYL-------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
N L P+S +++ +I+ C +G NA +L +EMK
Sbjct: 406 NVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMI------------------EKQRPVDFI 361
G P+S + N LV L GE+E+T+ L +M+ K R D I
Sbjct: 466 GLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVI 525
Query: 362 -----------------TYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
TY T++ CR G A + K++ K ++ D TY L+
Sbjct: 526 LHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALI-- 583
Query: 404 LEDDFGNSIRHHLR 417
G I HL+
Sbjct: 584 ----HGYCISSHLK 593
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I + +++ L A+Y++ M + P + +Y + GK +
Sbjct: 90 YTTLIDAYCKSQCLEDALYMYDEMTVKSLV---PDVVTYTCIMNGLCKSGK--------V 138
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +F++M G+ P+ FS ++I +V +A + +M VV + Y
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRM-VVRGIGFDVVVYTA 197
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GL G NA ++ + + VP+ +Y++L+ G+V + L EM EK
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ I Y +++D ++G EAM +++++ +N++ + + Y L+D
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLID 305
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L ++M I P++ +S++ GY +N+A+ + +M V N LPN F Y LI G
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM-VQRNILPNVFVYGTLIDGY 307
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ A +L EMK +G ++ +S V+ L +G +EE + +M+ + D
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+ Y +++D + G+ +A + +E+ K+
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKS 397
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 25/214 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ + AR + A + MK R L P+ +Y+IL + G M
Sbjct: 614 YNILLGGLSAARLIKEAAGLVNQMK-ERGL--VPNATTYDILVSGHGKIGN--------M 662
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L+ +M+ G P + N +I + ++ A + +M V PNS +YD
Sbjct: 663 KECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQV-RGIPPNSSTYDI 721
Query: 296 LIHG---LCAQGR---------TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
LI G L Q A+ L +EM KGF+P + + LA G+ +
Sbjct: 722 LICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGK-KA 780
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
+ + + K++ V + + + R+G+ G
Sbjct: 781 DAQRILNKLYKKKTVQELLAGVLWESRERKGKPG 814
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
S + +N L+ NGE+ V+ L M + D +TY T+++ C+ G A KL+
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 384 KELQNKNL-IDGYTYTKLLD 402
E+ NL + TYT L+D
Sbjct: 76 GEISLVNLEPNVITYTTLID 95
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 53/280 (18%), Positives = 108/280 (38%), Gaps = 38/280 (13%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
++++ ++H R+LG A A +NT+I + + L A+
Sbjct: 417 KYESESFHTGMRQLGLAP--------------------DSATFNTMINAYCKEGNLGNAL 456
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ MK+ +P+ + NIL + G+ +E L M+ G P
Sbjct: 457 KLLNEMKS---YGLKPNSITCNILVQRLCAAGE--------IEKTMDLLNDMLVMGFHPT 505
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQ---MGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+ +++ S + L + Q MGV + +Y+ LI C G + A
Sbjct: 506 PTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDL----STYNTLISTFCRLGMIRRAT 561
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+ +M KG + +YN+L+ ++ +++ +M+ + + TY +L +
Sbjct: 562 LVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621
Query: 371 CRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGN 410
EA L+ +++ + L+ T +L GN
Sbjct: 622 SAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGN 661
>gi|326509863|dbj|BAJ87147.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 757
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 117/237 (49%), Gaps = 16/237 (6%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
V N M+A T + YNT+I+ F +K+ AV VF MK P + +YN L
Sbjct: 239 VYNAMIAD-GVAPTLSTYNTLIWGFGLCKKMESAVRVFGDMKGH---GVAPDVTTYNTLL 294
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
A++ +G +E+ R +F +M G+E + S N MIKGY+ +N V +AL +F
Sbjct: 295 NAWVRKGD--------LESARKVFDEMPEAGLERNSISYNVMIKGYVDANKVEEALGLFT 346
Query: 279 QMGVVYNYLPNSFSYDYLIHGLC-AQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALA 336
+MG L ++ L+ GLC +G+ AR+ +M + P KS + LVS L
Sbjct: 347 EMGEKGLRLTEK-TFAVLMPGLCDDEGKAAEARKAVADMAERRLTPKDKSVFLRLVSTLC 405
Query: 337 LNGEVEETVKNLWEMIE-KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
G+ + ++ + + K VD Y +++ +C G+ A+++L EL K +
Sbjct: 406 KAGDFDGALEVHKKSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVQVLDELLEKGTL 462
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 20/207 (9%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC-LFKQMVN 247
LS + F Y R RP ++ +L S+G +NH RC L M +
Sbjct: 128 LSLQFFRFAY----RRAGFRPEPATFALLVPILASKG---MLNHA-----RCILLDTMPS 175
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFH---QMGVVYNYLPNSFSYDYLIHGLCAQG 304
+ PD ++ +++ Y + +A+++F ++G+ L SY+ ++ + +G
Sbjct: 176 FSVCPDEATVAALVAAYGRAGIPQEAVKLFRLMPELGITRTAL----SYNAVLKAILCRG 231
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R AR + + M G P+ +YN+L+ L ++E V+ +M D TY
Sbjct: 232 REAMARRVYNAMIADGVAPTLSTYNTLIWGFGLCKKMESAVRVFGDMKGHGVAPDVTTYN 291
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL 391
T+L+ R+G A K+ E+ L
Sbjct: 292 TLLNAWVRKGDLESARKVFDEMPEAGL 318
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 113/287 (39%), Gaps = 28/287 (9%)
Query: 129 KQPRFRH---DASTYHIMTRKLGAAK----MYQEMDDVVNQ-MLATPSFCGTEA-LYNTI 179
K +F+H D Y ++ L A Q +D+++ + L +P EA YN +
Sbjct: 419 KSGQFKHVLVDPRQYGVLMESLCAGGKCDGAVQVLDELLEKGTLLSPKSPVLEAPAYNPV 478
Query: 180 IYFFAEARKLSRAVYVFK-YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
I + +A F+ MK + + ++N L G ++
Sbjct: 479 IEYLCNNGNTDKAETFFRQLMKKGVDDKS-----AFNSLIRGHAKEGA--------LDAA 525
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+ + M G+ D S +I ++ N DA M + + +LP + ++
Sbjct: 526 KEILAIMTRRGVPTDPHSHALLIDSFLKKNEPADAKTALDSM-MEHGHLPRPALFQSVMA 584
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
L GR + A + M KG + N +V AL + G VEE + + M+E
Sbjct: 585 ALFNDGRVQTASRVMKSMIEKGITENMDMANKIVEALFMRGHVEEAIGRVNLMVENGCMP 644
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +L +C + + EA KL +++ + TY ++L+ L
Sbjct: 645 DL---DKLLAALCEKDKVMEAQKLADFALDRDFEVSFSTYDRVLEAL 688
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 97/237 (40%), Gaps = 22/237 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS-RGKNTYINHVY 234
YN +I + +A K+ A+ +F M + L R + +++ +L GK
Sbjct: 325 YNVMIKGYVDANKVEEALGLFTEM-GEKGL--RLTEKTFAVLMPGLCDDEGKAA------ 375
Query: 235 METIRCLFKQMVNDGIEP-DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
R M + P D ++ + + AL + + G + L + Y
Sbjct: 376 --EARKAVADMAERRLTPKDKSVFLRLVSTLCKAGDFDGALEVHKKSGQFKHVLVDPRQY 433
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-------YNSLVSALALNGEVEETVK 346
L+ LCA G+ A ++ DE+ KG + S KS YN ++ L NG ++ +
Sbjct: 434 GVLMESLCAGGKCDGAVQVLDELLEKGTLLSPKSPVLEAPAYNPVIEYLCNNGNTDK-AE 492
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ + K+ D + +++ + G A ++L + + + D +++ L+D
Sbjct: 493 TFFRQLMKKGVDDKSAFNSLIRGHAKEGALDAAKEILAIMTRRGVPTDPHSHALLID 549
>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 481
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRXXFNVLIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLXEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+++ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLITSQCTSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 HLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDQAVKLLDKLIEKDII 358
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 134/297 (45%), Gaps = 13/297 (4%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
+ L P F++E + NV+ + L+ F W + F HB T+ + LG A
Sbjct: 3 IRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHBRETHLKIIEILGRASKLN 62
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
++ M E ++ +I + + + +V +F+ M+ L +++SY
Sbjct: 63 HARCILLDM-PKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKME---ELGVERTLKSY 118
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ LF L RG+ YM R F +M+++GIEP N +I G+ LS V A
Sbjct: 119 DALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRXXFNVLIWGFFLSGKVETAN 170
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 171 RFFEDMK-SREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKG 229
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 230 YVSVDQVDDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYL 286
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 23/240 (9%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
PSF E +YN + A+ A+ F++++ S E R ++ L G
Sbjct: 7 VPSF-DHELVYNVL----HSAKTSEHALQFFRWVERSNLFEHB---RETHLKIIEIL--G 56
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
+ + +NH RC+ M G+E D MI Y V +++++F +M GV
Sbjct: 57 RASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGV 111
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
SYD L + +GR A+ ++M +G P+ +N L+ L+G+VE
Sbjct: 112 ERTLK----SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXXFNVLIWGFFLSGKVE 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+ +M ++ D +TY T+++ R + EA K E++ +N+ TYT L+
Sbjct: 168 TANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLI 227
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 145/312 (46%), Gaps = 30/312 (9%)
Query: 98 LPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ--- 154
L PR +C V+ Q D V L+ F W+ +Q R+RHD Y +M L K+ Q
Sbjct: 48 LKPRL----VCAVLLSQSDERVALDFFFWSDRQWRYRHDPIVYCVMLDVLSKTKLCQGAR 103
Query: 155 --EMDDVVNQMLATPS-FCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
V + TP FC ++ ++ A KL A+ V M+ + +E P++
Sbjct: 104 RVLRLMVRRGIQRTPQDFC-------CVMVSYSRAGKLRNAMQVLTMMQKA-GIE--PNL 153
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
N + + ++ + +R ++M GI P++ + N +IKGY + V
Sbjct: 154 LVCNTAIHVLV-------MANMLEKALR-FLERMQLLGIMPNVVTYNCLIKGYCDLHRVE 205
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
DA+ + +M + P+ SY ++ LC R + ++ ++M+ + +YN+L
Sbjct: 206 DAMELISEMPL-KGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTL 264
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ L + +E ++ L E ++ VD + Y ++D C+ GR +A +++ E+ +
Sbjct: 265 IHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGC 324
Query: 392 I-DGYTYTKLLD 402
I D TYT +++
Sbjct: 325 IPDVVTYTAIIN 336
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 129/303 (42%), Gaps = 45/303 (14%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY-------------F 182
D +Y+ + L + +E+ DV+ +M T + YNT+I+ F
Sbjct: 222 DKVSYYTVMGFLCKNRRIREVMDVIEKMEDT-KLLADQVTYNTLIHMLCKHQHADEALQF 280
Query: 183 FAEARK-------LSRAVYVFKYMKNSRNLE------------CRPSIRSYNILFTAFLS 223
EA+K + + V Y K R + C P + +Y + F
Sbjct: 281 LREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQ 340
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
G+ + R + +QM G +P+ S + +KG + ++A +
Sbjct: 341 AGE--------VGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQ 392
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+ + PN+ +Y ++HG +G+ +A ++ EM KGF P+ N L+ +L G V+E
Sbjct: 393 W-WTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDE 451
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE--LQNKNLIDGYTYTKLL 401
K + E + V+ + + TV+ C++ A+ LL + L NK+ D TYT ++
Sbjct: 452 AKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKH-PDAVTYTTII 510
Query: 402 DVL 404
D L
Sbjct: 511 DAL 513
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 115/296 (38%), Gaps = 39/296 (13%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L+ A K+ F+ D Y + + ++VN+M T Y II
Sbjct: 278 LQFLREAQKRG-FQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMF-TRGCIPDVVTYTAII 335
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------------- 226
F++A ++ +A + + M C+P+ SY +G
Sbjct: 336 NGFSQAGEVGQARKMLQQMYKH---GCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQ 392
Query: 227 ----NTYINHVYMETIR--------C-LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
N V M R C + ++M+ G P +N +++ V++A
Sbjct: 393 WWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEA 452
Query: 274 LRIFHQ---MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ + MG N + ++ +IH C Q + A L D+M P + +Y +
Sbjct: 453 KKFMEECLNMGCAVN----AVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTT 508
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++ AL G +EE + +M++K +TYRTV+ + GR + + LL ++
Sbjct: 509 IIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKM 564
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 15/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +++ F KLS A V + M P+ N+L + G+ +
Sbjct: 401 YSVVMHGFRREGKLSDACDVVREMIGKGFF---PTPVEINLLLQSLCRIGR--------V 449
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + ++ +N G + + ++I + + + AL + M + N P++ +Y
Sbjct: 450 DEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDM-YLSNKHPDAVTYTT 508
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I L +GR + A EL +M +KG P+ +Y +++ G VE+ + L +M+ +Q
Sbjct: 509 IIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQ 568
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL-KELQNKNLIDGYTYTKLLD 402
+ V++++C G A KLL K L+ + ID T L++
Sbjct: 569 EC--RTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLME 614
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 13/236 (5%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
C E Y TII FA+ L A V M S + PSI +YN L G+
Sbjct: 153 GLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFI---PSIVTYNALINGHCVLGR- 208
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
ME L + MV G+ PD+ S +++I G+ + ++ A ++ +M + + L
Sbjct: 209 -------MEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEM-IGKSVL 260
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P++ +Y LI GLC Q R A ++ EM P +Y +L++A G++ + +
Sbjct: 261 PDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHL 320
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLD 402
EMI+K D +TY +++ + ++ R+ EA +LL +L + ++ TY L++
Sbjct: 321 HDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIE 376
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
FK+M +G P++ + N+MI GY ++A MG+ PN +++ +I+GL
Sbjct: 5 FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGL-KGLEPNLITFNMIINGL 63
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C GR K E+ EM RKG+VP +YN+LV+ G + + EM+ +
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLD 402
+TY ++++ +C+ G AM+ ++ + L I+G+ LLD
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLD 175
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 135/280 (48%), Gaps = 16/280 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T++++ L +E +V+ +M + + E YNT++ + + +A+ +
Sbjct: 55 TFNMIINGLCRDGRLKETSEVLVEM-SRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAE 113
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M RN P++ +Y L + G +N ME F QM G+ P+ +
Sbjct: 114 M--VRN-GLSPNVVTYTSLINSMCKAGN---LNRA-ME----FFDQMHVRGLCPNERTYT 162
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I G+ +++A R+ ++M ++P+ +Y+ LI+G C GR + A L +M
Sbjct: 163 TIINGFAQQGLLDEAYRVLNEM-TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVG 221
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG +P SY++++S A N E++ + EMI K D +TY +++ +C + R E
Sbjct: 222 KGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTE 281
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLDVL--EDDFGNSIRHH 415
A + +E+ L D +TYT L++ E D ++ H
Sbjct: 282 ACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLH 321
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 31/232 (13%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + + L + E D+ +ML T E Y T+I + + L++A+++
Sbjct: 262 DAVTYSSLIQGLCEQRRLTEACDMFQEML-TIKLPPDEFTYTTLINAYCKEGDLNKALHL 320
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M L P +YN+L + ++ E R L K +D I P
Sbjct: 321 HDEMIQKGFL---PDAVTYNVLINGLNKQARSK-------EARRLLLKLFYDDSI-PSAV 369
Query: 256 SLNSMI---------------KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ N++I KG+ + +++A ++F M + N+ PN Y+ +IHG
Sbjct: 370 TYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESM-INKNHKPNEAIYNVIIHGH 428
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL---ALNGEVEETVKNLW 349
C G A +L EM FVP + + +LV AL ++GE+ E + ++
Sbjct: 429 CRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDIL 480
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 92/230 (40%), Gaps = 35/230 (15%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++I E R+L+ A +F+ M ++ P +Y L A+ G H
Sbjct: 266 YSSLIQGLCEQRRLTEACDMFQEM---LTIKLPPDEFTYTTLINAYCKEGDLNKALH--- 319
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M+ G PD + N +I G +A R+ ++ + +P++ +Y+
Sbjct: 320 -----LHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL-FYDDSIPSAVTYNT 373
Query: 296 LIH---------------GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
LI G C +G A ++ + M K P+ YN ++ G
Sbjct: 374 LIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGN 433
Query: 341 VEETVKNLWEMIEKQRPVDF----ITYRTVLDEICRRGRAGEAMKLLKEL 386
V + K EM+ VDF +T ++ + G GE +++ ++
Sbjct: 434 VLKAYKLYKEMVH----VDFVPHTVTVLALVKALFTEGMDGELNEVIGDI 479
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 121/244 (49%), Gaps = 13/244 (5%)
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
V +M+ T YNT+++ F + ++ RA+ + M+ C PS ++N+L
Sbjct: 224 VYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQER---GCYPSEVTFNVLIN 280
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
+G+ ++ + L ++M G+ ++ N +I GY + +AL ++ +
Sbjct: 281 GLSKKGE--------LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEE 332
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
M V P S++ +++G C +G+ +AR+ +M +K +P SYN+L+ G
Sbjct: 333 M-VTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLG 391
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYT 398
+ E L E+ + + +TY T++D +CR G A+KL +++ N+ + D TYT
Sbjct: 392 NIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYT 451
Query: 399 KLLD 402
L++
Sbjct: 452 VLVN 455
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 135/322 (41%), Gaps = 42/322 (13%)
Query: 112 TLQEDPLVCLELFNWASKQPRFRHD-----------------ASTYHIMTRKLGAAKMYQ 154
+++E P + L F QP F+ S Y +M R + + +MY
Sbjct: 114 SIREKPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERII-SFEMYG 172
Query: 155 EMDDVVNQMLATPSFCGTEALY-----------NTIIYFFAEARKLSRAVYVFKYMKNSR 203
+D ++ L E + N I+ + L +A+ V++ M
Sbjct: 173 IVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGE-- 230
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
RP++ +YN + +F G+ ++ L +M G P + N +I G
Sbjct: 231 -YGIRPTVTTYNTMLHSFCKGGE--------VQRALDLVPKMQERGCYPSEVTFNVLING 281
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ A + +M + ++Y+ LI G C +G A L +EM +G P
Sbjct: 282 LSKKGELQQAKGLIQEMAKA-GLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSP 340
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ S+N+++ G++ + + L +M++K D I+Y T++ CR G GEA LL
Sbjct: 341 TVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILL 400
Query: 384 KELQNKNL-IDGYTYTKLLDVL 404
EL+ +NL + TY L+D L
Sbjct: 401 DELRFRNLSFNIVTYNTLIDGL 422
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 119/278 (42%), Gaps = 22/278 (7%)
Query: 136 DASTYHIMTR---KLGAAKMYQEM-DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D TY ++ KLG M +E D++++ LA F T + + KL
Sbjct: 446 DVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGEL--------KLGD 497
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
FK + P + +YN+ G +E L ++M+ DG
Sbjct: 498 TAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGN--------LEEAGELLQKMIRDGHV 549
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD + S + ++ + H+ + IF+ M + P +Y LIH GR A
Sbjct: 550 PDHVTYTSFMHAHMENGHLREGREIFYDM-LSRGQTPTVVTYTVLIHAHALNGRLDWAMA 608
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
EM+ KG VP+ +YN L++ ++++ K EM EK + TY +++E C
Sbjct: 609 YFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENC 668
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDF 408
G+ EA++L ++ K + D T+ LL L+ D+
Sbjct: 669 NMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDY 706
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 124/267 (46%), Gaps = 14/267 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
R +TY+ M Q D+V +M + +E +N +I ++ +L +A
Sbjct: 233 IRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCY-PSEVTFNVLINGLSKKGELQQA 291
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M + R S +YN L + +G + +E + L+++MV G+ P
Sbjct: 292 KGLIQEMAKA---GLRVSPYTYNPLICGYCKKG-------LLVEAL-ALWEEMVTRGVSP 340
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ S N+++ G+ ++DA + M + N +P+ SY+ LI+G C G A L
Sbjct: 341 TVASHNTIMYGFCKEGKMSDARQQLSDM-LKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
DE++ + + +YN+L+ L G++E +K +MI + D +TY +++ C+
Sbjct: 400 LDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACK 459
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYT 398
G A + E+ + L D + YT
Sbjct: 460 LGNMLMAKEFFDEMLHVGLAPDQFAYT 486
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I L A+ K ++ N P + +Y +L G M
Sbjct: 415 YNTLIDGLCRLGDLETAL---KLKEDMINRGIHPDVVTYTVLVNGACKLGN--------M 463
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ F +M++ G+ PD F+ + I G + A ++ +M + + P+ +Y+
Sbjct: 464 LMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEM-LTKGFPPDVITYNV 522
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++GLC G + A EL +M R G VP +Y S + A NG + E + ++M+ +
Sbjct: 523 FVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRG 582
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
+ +TY ++ GR AM E+Q K ++ TY L++
Sbjct: 583 QTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLIN 630
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 19/206 (9%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F D TY++ L +E +++ +M+ Y + ++ E L
Sbjct: 513 FPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRD-GHVPDHVTYTSFMHAHMENGHLREG 571
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F M + P++ +Y +L A G+ ++ F +M G+ P
Sbjct: 572 REIFYDMLSRGQ---TPTVVTYTVLIHAHALNGR--------LDWAMAYFLEMQEKGVVP 620
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
++ + N +I G+ ++ A + F +M G+ PN ++Y LI+ C G+ + A
Sbjct: 621 NVITYNVLINGFCKVRKMDQACKFFIEMQEKGI----FPNKYTYTILINENCNMGKWQEA 676
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSAL 335
L +M K P S ++ +L+ L
Sbjct: 677 LRLYAQMLGKRIRPDSCTHGALLKKL 702
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 13/259 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ ++ T +I+ ++L AA ++ D++N ML F T + ++ +++R RA
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM-GFHPTPTTHKAVLDASSKSR---RA 522
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + + + +YN L + F G + +FK M+ GI
Sbjct: 523 DVILHXHDQLVGMGVKLDLSTYNTLISTFCRLG--------MIRRATLVFKDMMGKGILA 574
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
DI + N++I GY +S+H+ A + QM + PN +Y+ L+ GL A K A L
Sbjct: 575 DIITYNALIHGYCISSHLKKAFAVHSQM-LTEGVSPNVETYNILLGGLSAARLIKEAAGL 633
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++MK +G VP++ +Y+ LVS G ++E VK EMI K TY ++ +
Sbjct: 634 VNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAK 693
Query: 373 RGRAGEAMKLLKELQNKNL 391
+ +A +L++E+Q + +
Sbjct: 694 GKKMSQAKELMQEMQVRGI 712
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + ++SRAV + + MK P I +YN L F G +
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGP---APDIVTYNTLMNGFCKIGD--------L 68
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
T + L ++ +EP++ + ++I Y S + DAL ++ +M V + +P+ +Y
Sbjct: 69 FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEM-TVKSLVPDVVTYTC 127
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+++GLC G+ + A+ + EM+ G VP+ SY +L+ +L G V E M+ +
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG 187
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D + Y ++D + + G A A + + L ++L+ + TY+ L+D
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALID 235
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 129/314 (41%), Gaps = 90/314 (28%)
Query: 175 LYNTII--YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+Y T+I YF A+ R + A+ +FK MK SR LE N + +F++ K +
Sbjct: 299 VYGTLIDGYFKADQRGI--ALDLFKEMK-SRGLE------ENNFVIDSFVNNLKRSG--- 346
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVY 284
ME LFK M++ G+ PD + SM+ G+ + +DA I +M V Y
Sbjct: 347 -RMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAY 405
Query: 285 NYL-------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
N L P+S +++ +I+ C +G NA +L +EMK
Sbjct: 406 NVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMI------------------EKQRPVDFI 361
G P+S + N LV L GE+E+T+ L +M+ K R D I
Sbjct: 466 GLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVI 525
Query: 362 -----------------TYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
TY T++ CR G A + K++ K ++ D TY L+
Sbjct: 526 LHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALI-- 583
Query: 404 LEDDFGNSIRHHLR 417
G I HL+
Sbjct: 584 ----HGYCISSHLK 593
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I + +++ L A+Y++ M + P + +Y + GK +
Sbjct: 90 YTTLIDAYCKSQCLEDALYMYDEMTVKSLV---PDVVTYTCIMNGLCKSGK--------V 138
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +F++M G+ P+ FS ++I +V +A + +M VV + Y
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRM-VVRGIGFDVVVYTA 197
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GL G NA ++ + + VP+ +Y++L+ G+V + L EM EK
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ I Y +++D ++G EAM +++++ +N++ + + Y L+D
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLID 305
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L ++M I P++ +S++ GY +N+A+ + +M V N LPN F Y LI G
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM-VQRNILPNVFVYGTLIDGY 307
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ A +L EMK +G ++ +S V+ L +G +EE + +M+ + D
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+ Y +++D + G+ +A + +E+ K+
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKS 397
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 114/290 (39%), Gaps = 47/290 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y + L A M +D+ Q+L S Y+ +I + +++ +
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMF-QVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M+ P++ Y+ + + +G +N M+ +R +MV I P++F
Sbjct: 250 LQEMEEKHIF---PNVIVYSSIVDGYTKKG---LLNEA-MDVMR----KMVQRNILPNVF 298
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
++I GY ++ AL +F +M N+F D ++ L GR + A EL +
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKS-RGLEENNFVIDSFVNNLKRSGRMEEADELFKD 357
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI-------------- 361
M +G +P +Y S++ G+ + EM EK D +
Sbjct: 358 MMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK 417
Query: 362 --------------------TYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
T+ T+++ C+ G G A+KLL E+++ L
Sbjct: 418 YESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 25/214 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ + AR + A + MK R L P+ +Y+IL + G M
Sbjct: 614 YNILLGGLSAARLIKEAAGLVNQMK-ERGL--VPNATTYDILVSGHGKIGN--------M 662
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L+ +M+ G P + N +I + ++ A + +M V PNS +YD
Sbjct: 663 KECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQV-RGIPPNSSTYDI 721
Query: 296 LIHG---LCAQGR---------TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
LI G L Q A+ L +EM KGF+P + + LA G+ +
Sbjct: 722 LICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGK-KA 780
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
+ + + K++ V + + + R+G+ G
Sbjct: 781 DAQRILNKLYKKKTVQELLAGVLWESRERKGKPG 814
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
S + +N L+ NGE+ V+ L M + D +TY T+++ C+ G A KL+
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 384 KELQNKNL-IDGYTYTKLLD 402
E+ NL + TYT L+D
Sbjct: 76 GEISLVNLEPNVITYTTLID 95
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 89/163 (54%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF +MV G+ PD ++ ++I+GY +++ AL +F M V N P+ +Y+ LI G
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM-VRTNLKPDKVTYNTLIDGF 547
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G A+EL D+M RK +P SY ++++ +G + E + +M+EK +
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+T T++ CR G +A + L ++ + +I D ++Y L+D
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLID 650
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 22/286 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY+ L KM+ + D + N+M+ P F + T+I + + + +A
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF----YTFTTLIRGYCKDGNMDKA 521
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F+ M + NL +P +YN L F G+ M + L+ M+ I P
Sbjct: 522 LNLFEAMVRT-NL--KPDKVTYNTLIDGFCKAGE--------MGRAKELWDDMIRKDIIP 570
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D S +++ G+ S + +AL + QM + PN + + LI G C G A E
Sbjct: 571 DHISYGTVLNGFCSSGLLPEALNLCDQM-LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY 629
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+M G +P S SYN+L+ +E+ + EM ++ + ITY +L+ C
Sbjct: 630 LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCA 689
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSIRHH 415
G+ EA ++L+++ + DG TY+ L++ V +D+ + R H
Sbjct: 690 EGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFH 735
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
I +YN L A+ G +E L + G+EP + + N+++ G
Sbjct: 292 IVTYNTLINAYCREG--------LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKY 343
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ A + +M + PN+ +Y+ L+ +C + A+E+ DEM R+G +P S++S
Sbjct: 344 DRAKDVLIEM-LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ LA NG + + + + EM D + Y ++D CR G +A+K+ E+ +
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Query: 391 -LIDGYTYTKLLDVL 404
+D TY L+ L
Sbjct: 463 CFMDVVTYNTFLNGL 477
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 20/267 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T +IM L + ++ + ++ M F YNT+I + + A +
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADI-VTYNTLINAYCREGLVEEAFQLLNS 317
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+SR +E P + +YN + GK V +E M+ G+ P+ + N
Sbjct: 318 F-SSRGME--PGLLTYNAILYGLCKIGKYDRAKDVLIE--------MLQLGLTPNAATYN 366
Query: 259 SMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+++ +++ +A IF +M GV LP+ S+ LI L G A E
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGV----LPDLVSFSSLIGVLARNGHLYQALMHFRE 422
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+R G VP + Y L+ NG + + +K EM+ + +D +TY T L+ +C++
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
+A L E+ + ++ D YT+T L+
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLI 509
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 99/242 (40%), Gaps = 8/242 (3%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG- 225
P+F + + +++F R+LS A M + + S F S G
Sbjct: 129 PNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGL 188
Query: 226 -----KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
TY+ + F+ + G+ I + N ++ G + + V+ A I+ ++
Sbjct: 189 IYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV 248
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
V N ++ + +++ LC + +N +M+ KG +YN+L++A G
Sbjct: 249 -VRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTK 399
VEE + L + +TY +L +C+ G+ A +L E+ L + TY
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367
Query: 400 LL 401
LL
Sbjct: 368 LL 369
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
NT+I + + + +A ++Y+ + P SYN L + Y+ +E
Sbjct: 611 NTLIKGYCRSGDMPKA---YEYLSKMISNGIIPDSFSYNTLI--------DGYLKEANLE 659
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
L +M G++ +I + N ++ G+ + +A ++ +M + P+ +Y L
Sbjct: 660 KAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKM-IEIGINPDGATYSSL 718
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
I+G +Q K A DEM ++G VP +
Sbjct: 719 INGHVSQDNMKEAFRFHDEMLQRGLVPDDR 748
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 144/324 (44%), Gaps = 37/324 (11%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ + + V ++ F WA K+ F HD++TY + R L ++ E+ + M+ +P
Sbjct: 98 VLKIDVEVHVKIQFFKWAGKKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCA 157
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
G L + I+ + +++A+ +F +K + CRP+ +YN + + G +
Sbjct: 158 IGPSEL-SEIVKILGRVKMVNKALSIFYQVKGRK---CRPTAGTYNSVILMLMQEGHHEK 213
Query: 230 INHVYME-----------------------------TIRCLFKQMVNDGIEPDIFSLNSM 260
++ +Y E +R LF +M +G++P ++
Sbjct: 214 VHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVR-LFDEMKENGLQPTAKIYTTL 272
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+ Y V +AL + H+M + +P ++Y LI GL GR ++A + M + G
Sbjct: 273 MGIYFKLGKVEEALNLVHEMR-MRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDG 331
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR-RGRAGEA 379
P N+L++ L + ++E V+ EM + +TY T++ + + EA
Sbjct: 332 CKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEA 391
Query: 380 MKLLKELQNKNLI-DGYTYTKLLD 402
L+ ++ ++ +TY+ L+D
Sbjct: 392 SSWLERMKKDGVVPSSFTYSILID 415
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 135/336 (40%), Gaps = 68/336 (20%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLG-------AAKMYQEMDDVVNQMLATPSFCGTEA 174
EL+N + D TY + G A +++ EM + Q T
Sbjct: 216 ELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQ--------PTAK 267
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+Y T++ + + K+ A+ + M+ R C P++ +Y L GK+ + Y
Sbjct: 268 IYTTLMGIYFKLGKVEEALNLVHEMRMRR---CVPTVYTYTELIRGL---GKSGRVEDAY 321
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYN- 285
++K M+ DG +PD+ +N++I S+ + +A+ +F +M V YN
Sbjct: 322 -----GVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNT 376
Query: 286 --------------------------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
+P+SF+Y LI G C R + A L +EM K
Sbjct: 377 IIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEK 436
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
GF P +Y SL+++L E + E+ E Y ++ + GR EA
Sbjct: 437 GFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEA 496
Query: 380 MKLLKELQNKNLI-DGYTYTKLL------DVLEDDF 408
M L E++ I D Y Y L+ D++++ F
Sbjct: 497 MGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAF 532
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 22/225 (9%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC- 207
A + +EMD+ F A Y ++I +A++ A +F+ +K + C
Sbjct: 426 ALLLLEEMDE--------KGFPPCPAAYCSLINSLGKAKRYEAANELFQELKEN----CG 473
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
S+R Y ++ F GK N LF +M G PD+++ N++I G + +
Sbjct: 474 SSSVRVYAVMIKHF---GKCGRFNEAM-----GLFNEMKKLGCIPDVYAYNALITGMVRA 525
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ +++A +F M P+ S++ +++GL G K A E+ +MK P + S
Sbjct: 526 DMMDEAFSLFRTMEE-NGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVS 584
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
YN+++ L+ G EE K + EM K D ITY ++L+ + +
Sbjct: 585 YNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGK 629
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
MIK + N+A+ +F++M + +P+ ++Y+ LI G+ A L M+
Sbjct: 483 MIKHFGKCGRFNEAMGLFNEMKKL-GCIPDVYAYNALITGMVRADMMDEAFSLFRTMEEN 541
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
G P S+N +++ LA G + ++ +M D ++Y TVL + R G EA
Sbjct: 542 GCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEA 601
Query: 380 MKLLKELQNKNL-IDGYTYTKLLDVL 404
KL+KE+ +K D TY+ +L+ +
Sbjct: 602 TKLMKEMNSKGFEYDLITYSSILEAV 627
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 126/271 (46%), Gaps = 29/271 (10%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A KM EM D N ++ C ++ + ++S AV VF+ MK C
Sbjct: 284 AEKMLNEMFD--NGLVPCAVTC------TAVVNAYCREGRMSGAVRVFESMKLK---GCE 332
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +YN + F + GK VY L QM G+EPD+ + N +I+G +
Sbjct: 333 PNVWTYNAMVQGFCNVGK------VYKAM--ALLDQMRECGVEPDVVTYNLLIRGQCIDG 384
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
H+ A R+ M G+ + ++Y+ LI LC G+ A L D ++ +G P+S
Sbjct: 385 HIESAFRLLRLMEGNGLA----ADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNS 440
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
++N++++ L G+ + L +M+ D TY ++ +C+ + E + + E
Sbjct: 441 VTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDE 500
Query: 386 LQNKNLIDGYT-YTKLLDVL--EDDFGNSIR 413
+ K++ YT ++D L E ++G + R
Sbjct: 501 MLQKDVKPSTVNYTIVIDRLFKERNYGLATR 531
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ ++ +AR+ +Y+ + MK L RP+ R+Y L + K
Sbjct: 233 HAALVKGLCDARRGEEGLYMLQKMKE---LGWRPATRAYAALVDLWCREQKA-------- 281
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +M ++G+ P + +++ Y ++ A+R+F M + PN ++Y+
Sbjct: 282 EEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKL-KGCEPNVWTYNA 340
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ G C G+ A L D+M+ G P +YN L+ ++G +E + L M
Sbjct: 341 MVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNG 400
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D TY ++D +C+ G+ EA L L+ + +
Sbjct: 401 LAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 16/219 (7%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T A YN +I L A M S RP ++N L Y
Sbjct: 128 TGATYNALIRALCRRADLRHAQRYLSLMVRS---GWRPDAFTFNSLILG--------YCR 176
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
++ + LF +M G D S ++I+G+ + V++AL +F ++ P+ +
Sbjct: 177 TQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ-----PDMY 231
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
++ L+ GLC R + + +MK G+ P++++Y +LV + EE K L EM
Sbjct: 232 THAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEM 291
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+ +T V++ CR GR A+++ + ++ K
Sbjct: 292 FDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ +YN L A R + MV G PD F+ NS+I GY +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRY--------LSLMVRSGWRPDAFTFNSLILGYCRTQ 178
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ A +F +M + + ++ SY LI G C GR A EL E+++ P ++
Sbjct: 179 QLDVAQDLFDKMPL-RGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTH 233
Query: 329 NSLVSALALNGEVEETVKNLWEMIE-KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+LV L EE + L +M E RP Y ++D CR +A EA K+L E+
Sbjct: 234 AALVKGLCDARRGEEGLYMLQKMKELGWRPATR-AYAALVDLWCREQKAEEAEKMLNEMF 292
Query: 388 NKNLI 392
+ L+
Sbjct: 293 DNGLV 297
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
LR+F M P +Y+ LI LC + ++A+ M R G+ P + ++NSL+
Sbjct: 113 LRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLIL 172
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
+++ +M + D ++Y +++ C GR EA++L +EL+ ++
Sbjct: 173 GYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDM-- 230
Query: 394 GYTYTKLLDVLED 406
YT+ L+ L D
Sbjct: 231 -YTHAALVKGLCD 242
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 12/176 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I + K A + M ++ C P +Y+ F L + K + ++
Sbjct: 443 FNTVINGLCKGGKFDVACTFLEKMVSA---GCAPDTYTYSP-FIENLCKTKGSREGLSFI 498
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +M+ ++P + +I + A RI+ QM V P+ +Y
Sbjct: 499 D-------EMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQM-VSLGCSPDVVTYTT 550
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+ C +GR A + EMK+ G + + +YN+L+ G+ + V L M
Sbjct: 551 SVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHM 606
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
RF DA TY+ + K D++ QM+ + T+A YN I+ F + +L
Sbjct: 204 RFPPDAVTYNTLADGWCRVKDTSRALDILRQMVES-GIAPTKATYNIILKGFFRSGQLQH 262
Query: 192 AVYVFKYMK--NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A F MK S + C+P + SY + G+ ++ R +F +M +G
Sbjct: 263 AWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQ--------LDKARKVFDEMSIEG 314
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+P + N++I+ ++ DA+ +F M V Y+PN +Y LI GLC G+ A
Sbjct: 315 CKPSTATYNALIQVTCKKGNLEDAVAVFDDM-VRKGYIPNVVTYTVLIRGLCHAGKVVRA 373
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+L D MK +G P+ ++YN L+ GE+E+ + +L+E + K
Sbjct: 374 MKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGL-DLFETMSK 417
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR--PSIRSYNILFTAFLSRGKNTYINH 232
L+N+++ ++R+ S+A + R LE R P +YN L + R K+T
Sbjct: 177 LFNSLLDALVKSRRASKAASLV------RALEQRFPPDAVTYNTLADGW-CRVKDTS--- 226
Query: 233 VYMETIRCL--FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV----YNY 286
R L +QMV GI P + N ++KG+ S + A F QM N
Sbjct: 227 ------RALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENC 280
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
P+ SY ++HGL G+ AR++ DEM +G PS+ +YN+L+ G +E+ V
Sbjct: 281 KPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVA 340
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+M+ K + +TY ++ +C G+ AMKLL ++++
Sbjct: 341 VFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEG 384
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I A K+ RA+ + MK+ C P++++YN+L L G+ +
Sbjct: 357 YTVLIRGLCHAGKVVRAMKLLDRMKSE---GCEPNVQTYNVLIRYSLEEGE--------I 405
Query: 236 ETIRCLFKQMVNDGIE--PDIFSLNSMIKGYILSNHVND---ALRIFHQMGVVYNYLPNS 290
E LF+ M + G E P+ + N +I + D A R+ +M V YLP
Sbjct: 406 EKGLDLFETM-SKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEM-VDRGYLPRK 463
Query: 291 FSYDYLIHGLCAQGRTKNAREL 312
F ++ +++GL G + +REL
Sbjct: 464 FMFNRVLNGLMLTGNQELSREL 485
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 12/258 (4%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ D TY ++ A +M ++ N M ++YN +I + + + A+
Sbjct: 364 KPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGN-GIVADHSVYNILIDAYGKRGMMDEAM 422
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+F M+ + P +Y + AF G+ + F QM+ G++PD
Sbjct: 423 LIFTQMQERGVM---PDAWTYGTVIAAFSRMGR--------LADAMDKFNQMIAMGLKPD 471
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
NS+I+G+ + ++ A + +M PN+ ++ +I+ LC +GR A+++
Sbjct: 472 TIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIF 531
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
D + G P ++NSL+ L G++E+ L MI D +TY +LD CR
Sbjct: 532 DLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRN 591
Query: 374 GRAGEAMKLLKELQNKNL 391
GR + + L +E+ +K +
Sbjct: 592 GRIDDGLILFREMLSKGV 609
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 171/415 (41%), Gaps = 59/415 (14%)
Query: 26 TNSSHNSKTLSNYYLSQTQINPHLKLSSNAILCSCYSAIALSRSSSRGVGKRSKADSKPA 85
T S+ ++ L + L QT P L N L AL+R+ S + P+
Sbjct: 50 TLSTEDTHHLFDELLRQTTPVPERAL--NGFL------TALARAPSSATCR-----DGPS 96
Query: 86 LDDTQF-RCAVSELPPRFNNEELCNVMTLQE------DPLVCLELFNWASKQPRFRHDAS 138
L F R E PR +C L + P V LF K + D
Sbjct: 97 LAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTG-LKTDVI 155
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRAVYV 195
+I+ + L AK DD VN +L G E Y+T++ E + RA+ +
Sbjct: 156 VANILLKCLCHAK---RSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDL 212
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTYINH 232
M ++ C P++ SYN + F G+ ++YI+
Sbjct: 213 LHTMVK-KSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDA 271
Query: 233 V----YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
+ M+ + +QM+++G EPD + N MI GY + + +F +M +P
Sbjct: 272 LCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREM-TRRGLMP 330
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ F+ + + LC G++K A E D M KG P +Y+ L+ A G V + + NL
Sbjct: 331 DIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDML-NL 389
Query: 349 WEMIEKQRPV-DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ +E V D Y ++D +RG EAM + ++Q + ++ D +TY ++
Sbjct: 390 FNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVI 444
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 106/256 (41%), Gaps = 12/256 (4%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + + D NQM+A +YN++I F L +A +
Sbjct: 436 DAWTYGTVIAAFSRMGRLADAMDKFNQMIAM-GLKPDTIVYNSLIQGFCMHGNLVKAKEL 494
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M SR + RP+ +N + + G+ + F +++ G PD+
Sbjct: 495 ISEMM-SRGIP-RPNTVFFNSIINSLCKEGRVVEAQDI--------FDLVIHIGERPDVI 544
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NS+I GY L + A + M + P+ +Y L+ G C GR + L E
Sbjct: 545 TFNSLIDGYGLVGKMEKAFGVLDAM-ISVGIEPDVVTYSALLDGYCRNGRIDDGLILFRE 603
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M KG P++ +Y ++ L +G K EMIE +D T +L +CR
Sbjct: 604 MLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNC 663
Query: 376 AGEAMKLLKELQNKNL 391
EA+ L K+L N+
Sbjct: 664 DDEAIALFKKLGAMNV 679
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LFK++ ++ +I +N+MI +A +F + +PN+ +Y +I L
Sbjct: 670 LFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISAT-GLVPNASTYGVMITNL 728
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+G + A + M++ G PSS+ N+++ L GE+ + L ++ K ++
Sbjct: 729 LKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEA 788
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL 386
T +L R+G+ E +K L +
Sbjct: 789 STASLMLSLFSRKGKYREQIKSLPAM 814
>gi|357129487|ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Brachypodium distachyon]
Length = 837
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 31/247 (12%)
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR------ 224
G ++N +I+ +L +F MKN L PS +YN LF R
Sbjct: 473 GKLLMFNDLIHELCSLDRLDEGYKMFNLMKN---LGLIPSEFTYNSLFYGICRRKDPNCA 529
Query: 225 ----------GKNTYI-NHVYMETIRCL----------FKQMVNDGIEPDIFSLNSMIKG 263
G +I N M C+ +M+ G PDI + ++ + G
Sbjct: 530 LDLLRDMRTNGHRPWIKNCTEMVQQLCISGRITEALQFLDEMLKMGFLPDIVTYSAAMNG 589
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ V++AL IF + Y YLP+ +++ LI+G G+ A+E+ +EM KG P
Sbjct: 590 LCKTGEVDNALGIFRDISSKY-YLPDVVAHNILINGFRISGKLSEAQEVMEEMLEKGLFP 648
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
S +YN ++ +G +E+ + L +MI+++ +TY +++D +C GR EA+ L
Sbjct: 649 SIVTYNLMIDVWCKSGNIEKAIACLNKMIDEEESPTVVTYTSLIDGLCSTGRPDEAIALW 708
Query: 384 KELQNKN 390
++ +K
Sbjct: 709 HKMMDKG 715
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 26/236 (11%)
Query: 156 MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
+ D+V A C T + N + F R +S Y+ P + ++N
Sbjct: 577 LPDIVTYSAAMNGLCKTGEVDNALGIF----RDISSKYYL-------------PDVVAHN 619
Query: 216 ILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
IL F GK + V ++M+ G+ P I + N MI + S ++ A+
Sbjct: 620 ILINGFRISGKLSEAQEV--------MEEMLEKGLFPSIVTYNLMIDVWCKSGNIEKAIA 671
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
++M + P +Y LI GLC+ GR A L +M KG P+ +Y + V+ L
Sbjct: 672 CLNKM-IDEEESPTVVTYTSLIDGLCSTGRPDEAIALWHKMMDKGCAPNKIAYTAFVNGL 730
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
V+ + EM+ K +D + ++ + G A + +LLKE+ K++
Sbjct: 731 CKRARVDTALTYYEEMMTKGFELDTFSCLYFINFLISTGNATKGCELLKEVLQKDI 786
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 99/218 (45%), Gaps = 10/218 (4%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
EA Y + + +S V V ++ + + +P+ S+NI+ K
Sbjct: 402 AEAAYQLLTSMIRGGQGISDGVTVGAHVVDISE-DVKPNSDSFNIVVCGLCKVKK----- 455
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
++ L K M G + + N +I + +++ ++F+ M + +P+ F
Sbjct: 456 ---LDNALALIKDMTGIGCKGKLLMFNDLIHELCSLDRLDEGYKMFNLMKNL-GLIPSEF 511
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ L +G+C + A +L +M+ G P K+ +V L ++G + E ++ L EM
Sbjct: 512 TYNSLFYGICRRKDPNCALDLLRDMRTNGHRPWIKNCTEMVQQLCISGRITEALQFLDEM 571
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
++ D +TY ++ +C+ G A+ + +++ +K
Sbjct: 572 LKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISSK 609
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 13/229 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ + +KL A+ + K M + C+ + +N L S + ++ Y
Sbjct: 443 FNIVVCGLCKVKKLDNALALIKDMTG---IGCKGKLLMFNDLIHELCSLDR---LDEGYK 496
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+F M N G+ P F+ NS+ G N AL + M + P +
Sbjct: 497 -----MFNLMKNLGLIPSEFTYNSLFYGICRRKDPNCALDLLRDM-RTNGHRPWIKNCTE 550
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ LC GR A + DEM + GF+P +Y++ ++ L GEV+ + ++ K
Sbjct: 551 MVQQLCISGRITEALQFLDEMLKMGFLPDIVTYSAAMNGLCKTGEVDNALGIFRDISSKY 610
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDV 403
D + + +++ G+ EA ++++E+ K L TY ++DV
Sbjct: 611 YLPDVVAHNILINGFRISGKLSEAQEVMEEMLEKGLFPSIVTYNLMIDV 659
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 121/301 (40%), Gaps = 33/301 (10%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-TEALYNTI 179
L+ F WA +QP FRH T++ M L +Q A + C T +
Sbjct: 88 LDFFQWADEQPGFRHSCYTFNAMASLL---PRHQAAHLDRLAADALAACCPMTPGALGFL 144
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME-TI 238
+ A A+ VF + L C P+ ++N L G+ E +
Sbjct: 145 LRCLGAAGLPDAALLVFDGARTC--LSCTPNSYTFNCLLDTLAKAGRADDAEARLQEMVV 202
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDY 295
RC + + D ++L S+++ Y + +DA +F +M G V ++
Sbjct: 203 RCGDESV-------DKYTLTSLLQCYCNAGRPDDANGVFERMSQRGWVDEHV-----LTI 250
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L G+ A EL M+ G PS K+ + LV A +++ + EM +K
Sbjct: 251 LAVAFSKWGKVDGAVELLGRMELLGMRPSEKTLSVLVHGFAKQLRLDKAM----EMFDKM 306
Query: 356 RPVDFIT----YRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL--EDDF 408
F+ Y +++ +C++ G+A+KL +E++ + D K+L+ E DF
Sbjct: 307 GSYGFVAGLPMYSVLIEGLCQKKEIGKAVKLFEEMKRGEVAPDARLLKKMLEAFCREGDF 366
Query: 409 G 409
Sbjct: 367 A 367
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 5/175 (2%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +M G+ P +L+ ++ G+ ++ A+ +F +MG Y ++ Y LI GL
Sbjct: 267 LLGRMELLGMRPSEKTLSVLVHGFAKQLRLDKAMEMFDKMGS-YGFVAGLPMYSVLIEGL 325
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C + A +L +EMKR P ++ ++ A G+ + E + +P
Sbjct: 326 CQKKEIGKAVKLFEEMKRGEVAPDARLLKKMLEAFCREGDFAIAGLFINENARQLKPSGV 385
Query: 361 IT-YRTVLDEICRRGRAGEAMKLLKEL--QNKNLIDGYTY-TKLLDVLEDDFGNS 411
I + VL+ G+A A +LL + + + DG T ++D+ ED NS
Sbjct: 386 IALFNVVLEGFVNHGQAEAAYQLLTSMIRGGQGISDGVTVGAHVVDISEDVKPNS 440
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 16/272 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L+L N K + ++ T +I+ ++L AA ++ D++N ML F T + ++
Sbjct: 456 LKLLNEM-KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM-GFHPTPTTHKAVL 513
Query: 181 YFFAEARKLSRAVYVFKYMKNSR-NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+A SR V +M + + + + +YN L + F G +
Sbjct: 514 ----DASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLG--------MIRRAT 561
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+FK M+ GI DI + N++I GY +S+H+ A + QM + PN +Y+ L+ G
Sbjct: 562 LVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQM-LTEGVSPNVETYNILLGG 620
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
L A K A L ++MK +G VP++ +Y+ LVS G ++E VK EMI K
Sbjct: 621 LSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPK 680
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
TY ++ + + +A +L++E+Q + +
Sbjct: 681 TRTYNVLISCFAKGKKMSQAKELMQEMQVRGI 712
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + ++SRAV + + MK P I +YN L F G +
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGP---APDIVTYNTLMNGFCKIGD--------L 68
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
T + L ++ +EP++ + ++I Y S + DAL ++ +M V + +P+ +Y
Sbjct: 69 FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEM-TVKSLVPDVVTYTC 127
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+++GLC G+ + A+ + EM+ G VP+ SY +L+ +L G V E M+ +
Sbjct: 128 IMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRG 187
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D + Y ++D + + G A A + + L ++L+ + TY+ L+D
Sbjct: 188 IGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALID 235
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 129/314 (41%), Gaps = 90/314 (28%)
Query: 175 LYNTII--YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+Y T+I YF A+ R + A+ +FK MK SR LE N + +F++ K +
Sbjct: 299 VYGTLIDGYFKADQRGI--ALDLFKEMK-SRGLE------ENNFVIDSFVNNLKRSG--- 346
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVY 284
ME LFK M++ G+ PD + SM+ G+ + +DA I +M V Y
Sbjct: 347 -RMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAY 405
Query: 285 NYL-------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRK 319
N L P+S +++ +I+ C +G NA +L +EMK
Sbjct: 406 NVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMI------------------EKQRPVDFI 361
G P+S + N LV L GE+E+T+ L +M+ K R D I
Sbjct: 466 GLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVI 525
Query: 362 -----------------TYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
TY T++ CR G A + K++ K ++ D TY L+
Sbjct: 526 LHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIH- 584
Query: 404 LEDDFGNSIRHHLR 417
G I HL+
Sbjct: 585 -----GYCISSHLK 593
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I + +++ L A+Y++ M + P + +Y + GK +
Sbjct: 90 YTTLIDAYCKSQCLEDALYMYDEMTVKSLV---PDVVTYTCIMNGLCKSGK--------V 138
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +F++M G+ P+ FS ++I +V +A + +M VV + Y
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRM-VVRGIGFDVVVYTA 197
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GL G NA ++ + + VP+ +Y++L+ G+V + L EM EK
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ I Y +++D ++G EAM +++++ +N++ + + Y L+D
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLID 305
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L ++M I P++ +S++ GY +N+A+ + +M V N LPN F Y LI G
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM-VQRNILPNVFVYGTLIDGY 307
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ A +L EMK +G ++ +S V+ L +G +EE + +M+ + D
Sbjct: 308 FKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+ Y +++D + G+ +A + +E+ K+
Sbjct: 368 VNYTSMMDGFFKAGKESDAFNIAQEMTEKS 397
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 24/192 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ + AR + A + MK R L P+ +Y+IL + G M
Sbjct: 614 YNILLGGLSAARLIKEAAGLVNQMK-ERGL--VPNATTYDILVSGHGKIGN--------M 662
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L+ +M+ G P + N +I + ++ A + +M V PNS +YD
Sbjct: 663 KECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQV-RGIPPNSSTYDI 721
Query: 296 LIHG---LCAQGR---------TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
LI G L Q A+ L +EM KGF+P + + LA G+ +
Sbjct: 722 LICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKAD 781
Query: 344 TVKNLWEMIEKQ 355
+ L ++ +K+
Sbjct: 782 AQRILNKLYKKK 793
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
S + +N L+ NGE+ V+ L M + D +TY T+++ C+ G A KL+
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 384 KELQNKNL-IDGYTYTKLLD 402
E+ NL + TYT L+D
Sbjct: 76 GEISLVNLEPNVITYTTLID 95
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 134/283 (47%), Gaps = 15/283 (5%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ +D V L F+W + P F+HD TY M LG AK + ++ +++QM+
Sbjct: 311 VLKQLQDHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRD-GC 369
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
T YN +I+ + A L+ AV VF M+ + C P +Y L G +
Sbjct: 370 QPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKA---GCEPDRVTYCTLIDIHAKAG---F 423
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+N ME ++++M G+ PD F+ + MI + H+ A ++F +M + +PN
Sbjct: 424 LNFA-ME----MYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEM-IEQGCVPN 477
Query: 290 SFSYDYLIHGLCAQGRT-KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+Y+ +I L A+ R +NA +L +M+ GF P +Y+ ++ L +G ++E
Sbjct: 478 LVTYNIMI-ALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIF 536
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
EM K D Y ++D + G +A + + + + L
Sbjct: 537 SEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGL 579
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 10/215 (4%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L+R + F + L +P ++ L GK H LF +M+ +
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALH--------LFDKMIGE 160
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G PD+ + ++I G + + A+R+ M V N PN F+Y+ +I LC +
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM-VQKNCQPNVFAYNTIIDSLCKDRQVTE 219
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L EM KG P +YNSL+ AL E + L EM++ + D +++ TV+D
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+C+ G+ EA ++ ++ + + + TYT L+D
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMD 314
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 119/291 (40%), Gaps = 60/291 (20%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I+ + + M +S+ + P + S+N + A GK T + V
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIM---PDVVSFNTVVDALCKEGKVTEAHDVVD 295
Query: 236 ETIR-----------------CL----------FKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ I+ CL F MV G P++ S N++I GY
Sbjct: 296 KMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQ 355
Query: 269 HVN-------------------DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
++ +A+++F M V +PN SY+ LI+G C R A
Sbjct: 356 RIDKAIHYTXLMDXXCCYLNMDEAVKVFDTM-VCKGCMPNVISYNTLINGYCKIQRIDKA 414
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
L EM R+ +P + +Y++L+ L +++ + EM+ + + +TYR +LD
Sbjct: 415 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 474
Query: 370 ICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVLEDDFGN 410
+C+ EAM LLK ++ NL IDG L+ D F N
Sbjct: 475 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 525
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PS +N L T+ ++ T+ L QM + GI P+I++L+ +I + N
Sbjct: 59 PSTVDFNKLLTSIAKMKHHS--------TLLSLSHQMDSFGIPPNIYTLHILINSFCHLN 110
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V A + ++ + + P++ ++ LI G+C +G+ A L D+M +GF P +Y
Sbjct: 111 RVGFAFSVLAKI-LKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTY 169
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L++ L G ++ L M++K + Y T++D +C+ + EA L E+
Sbjct: 170 GTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVT 229
Query: 389 KNL-IDGYTYTKLLDVL 404
K + D +TY L+ L
Sbjct: 230 KGISPDIFTYNSLIHAL 246
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 22/239 (9%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A + T+I K+ A+++F M RP + +Y L G +
Sbjct: 132 ATFTTLIRGICVEGKIGEALHLFDKMIGE---GFRPDVVTYGTLINGLCKVGNTS----- 183
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
IR L MV +P++F+ N++I V +A +F +M V P+ F+Y
Sbjct: 184 --AAIR-LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM-VTKGISPDIFTY 239
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LIH LC K+ L +EM +P S+N++V AL G+V E + +MI+
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 299
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLD 402
+ + +TY ++D C EA+K+ + K LI+GY + +D
Sbjct: 300 RGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 119/295 (40%), Gaps = 62/295 (21%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNS---RNLE-------------CRPSIRSYNILFT 219
YNT+I + + +++ +A++ M N++ C P++ SYN L
Sbjct: 344 YNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLI- 402
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
N Y ++ LF +M + PD + +++I G + DA+ +FH+
Sbjct: 403 -------NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHE 455
Query: 280 MGVVYNYLPNSFSY----DYL-------------------------------IHGLCAQG 304
M V + +PN +Y DYL I G+C G
Sbjct: 456 M-VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 514
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ AR+L + KG P +Y+ +++ L G ++E K EM E ++ Y
Sbjct: 515 ELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYN 574
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD-FGNSIRHHLR 417
T+ R A++LL+E+ + D T T + +L DD S++ LR
Sbjct: 575 TITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 629
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 139/325 (42%), Gaps = 50/325 (15%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVN-------------------QM 163
F + S QP FR TY ++ R L +M+ E ++ +M
Sbjct: 104 FFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEM 163
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKN--------------SRNLECRP 209
TP CG L + ++ + + + A+ F+ + R ++ P
Sbjct: 164 RVTP-MCG--FLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNP 220
Query: 210 SIRSYNILFTAFLSRG--KNTYINHVYMETI---------RCLFKQMVNDGIEPDIFSLN 258
+ + + L G N Y+ ++ M + +F ++ ++P + S N
Sbjct: 221 TGTIWG-FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFN 279
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I GY ++++ R+ HQM P+ F+Y LI+ LC + + A L DEM +
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTR-PDVFTYSALINALCKENKMDGAHGLFDEMCK 338
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G +P+ + +L+ + NGE++ ++ +M+ K D + Y T+++ C+ G
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLD 402
A ++ + + L D TYT L+D
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLID 423
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL-SRGKNTYINHVY 234
Y+ +I + K+ A +F M C+ + +++FT + +N I
Sbjct: 313 YSALINALCKENKMDGAHGLFDEM-------CKRGLIPNDVIFTTLIHGHSRNGEI---- 361
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+ ++ +++M++ G++PDI N+++ G+ + + A I M + P+ +Y
Sbjct: 362 -DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM-IRRGLRPDKITYT 419
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI G C G + A E+ EM + G +++LV + G V + + L EM+
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
D +TY ++D C++G A KLLKE+Q+ + TY LL+ L
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 116/285 (40%), Gaps = 34/285 (11%)
Query: 129 KQPRFRHDASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
++ R R D TY + L GA ++ EM + ++ T+I+
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM--------CKRGLIPNDVIFTTLIH 353
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ ++ ++ M S+ L+ P I YN L F G + R +
Sbjct: 354 GHSRNGEIDLMKESYQKML-SKGLQ--PDIVLYNTLVNGFCKNGD--------LVAARNI 402
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIH 298
M+ G+ PD + ++I G+ V AL I +M G+ + + + L+
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV----GFSALVC 458
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G+C +GR +A EM R G P +Y ++ A G+ + K L EM
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+TY +L+ +C+ G+ A LL + N ++ D TY LL+
Sbjct: 519 SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + K++ A V + M + P Y L F G ++ Y
Sbjct: 326 YNGVILLLCKTGKVAEAERVLREMISE---GIAPDGVIYTTLIDGFCKLGN---VSSAYR 379
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +M I PD + ++I G + V +A ++FH+M V P+ +Y
Sbjct: 380 -----LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM-VCKRLEPDEVTYTA 433
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G+ K A L ++M + G P+ +Y +L L GEV+ + L EM K
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
++ TY ++++ +C+ G +A+KL+K+++ D TYT L+D
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMD 541
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 13/253 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + L E + V+ +M+ + +Y T+I F + +S A +F
Sbjct: 325 TYNGVILLLCKTGKVAEAERVLREMI-SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDE 383
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M+ + P +Y + G+ ME + LF +MV +EPD +
Sbjct: 384 MQKRK---ISPDFITYTAVICGLCQTGR-------VMEADK-LFHEMVCKRLEPDEVTYT 432
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I GY + +A + +QM + PN +Y L GLC G A EL EM R
Sbjct: 433 ALIDGYCKEGKMKEAFSLHNQM-LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG + +YNSLV+ L G +++ VK + +M D +TY T++D C+
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 551
Query: 379 AMKLLKELQNKNL 391
A +LL+++ ++ L
Sbjct: 552 AHELLRQMLDREL 564
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 10/191 (5%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
SYNI+ + G+ + L QM G PD+ S +++I GY +
Sbjct: 255 SYNIITHSLCQLGRVVEAHQ--------LLLQMELRGCIPDVISYSTVINGYCQVGELQR 306
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
L++ +M + PN ++Y+ +I LC G+ A + EM +G P Y +L+
Sbjct: 307 VLKLIEEMQI-KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLI 365
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
G V + EM +++ DFITY V+ +C+ GR EA KL E+ K L
Sbjct: 366 DGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLE 425
Query: 392 IDGYTYTKLLD 402
D TYT L+D
Sbjct: 426 PDEVTYTALID 436
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 21/198 (10%)
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
R ++I F + G ++ R LF +M+N G+ + S N I LS ++
Sbjct: 183 RVFDIFFQVLVEAG--------MLDEARKLFDKMLNYGLLISVDSCNLFISH--LSEDLD 232
Query: 272 D---ALRIF---HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
AL++F ++GV +N + SY+ + H LC GR A +L +M+ +G +P
Sbjct: 233 GIKIALKVFVEFPEVGVCWN----TASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDV 288
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
SY+++++ GE++ +K + EM K + TY V+ +C+ G+ EA ++L+E
Sbjct: 289 ISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLRE 348
Query: 386 LQNKNLI-DGYTYTKLLD 402
+ ++ + DG YT L+D
Sbjct: 349 MISEGIAPDGVIYTTLID 366
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 23/260 (8%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
KLG + D + + +P F Y +I + ++ A +F M R
Sbjct: 370 KLGNVSSAYRLFDEMQKRKISPDF----ITYTAVICGLCQTGRVMEADKLFHEMVCKR-- 423
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P +Y L + GK M+ L QM+ G+ P+I + ++ G
Sbjct: 424 -LEPDEVTYTALIDGYCKEGK--------MKEAFSLHNQMLQMGLTPNIVTYTALADGLC 474
Query: 266 LSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
V+ A + H+M G+ N ++Y+ L++GLC G A +L +M+ GF
Sbjct: 475 KCGEVDTANELLHEMCRKGLELNI----YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 530
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P + +Y +L+ A + E+ + L +M++++ +T+ +++ C G + KL
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590
Query: 383 LKELQNKNLI-DGYTYTKLL 401
LK + K ++ + TY L+
Sbjct: 591 LKWMLEKGIMPNATTYNSLI 610
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 122/280 (43%), Gaps = 15/280 (5%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
LF+ K+ + D TY + L E D + ++M+ E Y +I
Sbjct: 380 LFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK-RLEPDEVTYTALIDG 437
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
+ + K+ A F + P+I +Y L G+ ++T L
Sbjct: 438 YCKEGKMKEA---FSLHNQMLQMGLTPNIVTYTALADGLCKCGE--------VDTANELL 486
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
+M G+E +I++ NS++ G + +++ A+++ M V + P++ +Y L+ C
Sbjct: 487 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA-GFHPDAVTYTTLMDAYCK 545
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
A EL +M + P+ ++N L++ ++G +E+ K L M+EK + T
Sbjct: 546 SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 605
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
Y +++ + C R ++ + + K ++ DG TY L+
Sbjct: 606 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 645
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 156 MDDVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
+D V M + F Y T++ + ++R++ RA + + M + E +P++ +
Sbjct: 514 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR---ELQPTVVT 570
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
+N+L F G +E L K M+ GI P+ + NS+IK Y + N++
Sbjct: 571 FNVLMNGFCMSG--------MLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRAT 622
Query: 274 LRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
I+ M GVV P+ +Y+ LI G C K A L +M KGF + SYN+
Sbjct: 623 TEIYRGMCAKGVV----PDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 678
Query: 331 LVSAL 335
L+
Sbjct: 679 LIKGF 683
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 147/331 (44%), Gaps = 24/331 (7%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDA-----STYHI 142
+ + R + L PR ++C V+ LQ D V L F WA +Q R+RHD + ++
Sbjct: 183 EGELRHLLRSLKPR----QVCAVLQLQTDERVALRFFYWADRQWRYRHDPIRRPEAFGYV 238
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS 202
M A K+ M V M+ ++ NT I+ +L +AV ++++
Sbjct: 239 MVSYSRAGKLRNAMR--VLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAV---RFLERM 293
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
+ +E P++ +YN L Y + +E L +M G PD S +++
Sbjct: 294 QIVEIEPNVITYNCLIKG--------YCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMG 345
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
+ + + +M N LP+ +Y+ +H L G A E E + + F
Sbjct: 346 FLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFR 405
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
Y+++V + G +++ + + EM K D +TY +V++ +C+ + +A K+
Sbjct: 406 VDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKM 465
Query: 383 LKELQNKNL-IDGYTYTKLLDVLEDDFGNSI 412
L+++ + +YT LL+ L + GNS+
Sbjct: 466 LRQMYKHGCKPNTVSYTALLNGLCKN-GNSL 495
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 129/305 (42%), Gaps = 48/305 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +Y+ + L K +E+ ++ +ML + + YNT ++ + K
Sbjct: 336 DKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLS---KHGHGDEA 392
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
++++ + R Y+ + +F G+ M+ + + +M + G PD+
Sbjct: 393 LEFLREAEERRFRVDKVGYSAIVHSFCREGR--------MDKAKEIVNEMFSKGCIPDVV 444
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM-----------------GVVYN------------- 285
+ S+I G V+ A ++ QM G+ N
Sbjct: 445 TYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMS 504
Query: 286 ----YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
++PN+ +Y L+HG +G++ A +L EM +KGF P+ N L+ +L +V
Sbjct: 505 EEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 564
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE--LQNKNLIDGYTYTK 399
+E + + + + V+ + + TV+ C++ A+ LL + L NK+ D TYT
Sbjct: 565 DEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKH-PDVVTYTT 623
Query: 400 LLDVL 404
++D L
Sbjct: 624 IIDAL 628
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 137/339 (40%), Gaps = 64/339 (18%)
Query: 124 FNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFF 183
F +++ RFR D Y + + ++VN+M + Y ++I
Sbjct: 395 FLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDV-VTYTSVINGL 453
Query: 184 AEARKLSRAVYVFKYM--------------------KNSRNLECR------------PSI 211
+ RK+ +A + + M KN +LE R P+
Sbjct: 454 CQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNA 513
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLF---------------------------KQ 244
+Y++L F GK++ + E I+ F +Q
Sbjct: 514 ITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQ 573
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
+N+G ++ + ++I G+ + + AL + M + N P+ +Y +I L +G
Sbjct: 574 CLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDM-YLSNKHPDVVTYTTIIDALGKKG 632
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R + A +L +M R G +P+ +Y +++ G VE+ +K L +M+ +Q Y
Sbjct: 633 RIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECR--TAYN 690
Query: 365 TVLDEICRRGRAGEAMKLL-KELQNKNLIDGYTYTKLLD 402
V++++C G +A KLL K L+ + ID T L++
Sbjct: 691 QVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIE 729
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 131/278 (47%), Gaps = 14/278 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY I+ A + ++ + +M + T Y +I+ + +A+++ +A +
Sbjct: 491 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSV-GCSPTVVTYTALIHAYLKAKQVPQANDI 549
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC--------LFKQMVN 247
F M ++ CRP+ +Y L G + VY + I F
Sbjct: 550 FHRMVDA---GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 606
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+ P++ + +++ G ++ V+ A + M + PN YD LI G C G+
Sbjct: 607 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM-LSSGCEPNHIVYDALIDGFCKAGKID 665
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A+E+ +M + G++PS +Y SL+ + +G ++ +K L +M++ + +TY ++
Sbjct: 666 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 725
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +CR G + +A+KLL ++ K + TYT L+D L
Sbjct: 726 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 40/262 (15%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
++N M+ T +L+N++++ + + + Y +K + C P YNI
Sbjct: 333 IINMMM-TEGCNPNPSLFNSLVHSYCNEKDYA---YAYKLLNRMTTCGCPPGYVVYNIFI 388
Query: 219 TAFLSRGK--------------------NTYINHVYMETI-RCL------------FKQM 245
+ + K N +N V + RCL K+M
Sbjct: 389 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 448
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
+ G PD + + +I + V A +F +M +V P+ ++Y LI C G
Sbjct: 449 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMV-GVTPDVYTYTILIDSFCKAGL 507
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ-RPVDFITYR 364
+ A+ L +EM+ G P+ +Y +L+ A +V + M++ RP D +TY
Sbjct: 508 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND-VTYG 566
Query: 365 TVLDEICRRGRAGEAMKLLKEL 386
++D +C+ G +A ++ +L
Sbjct: 567 ALVDGLCKAGNISKAFEVYAKL 588
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 49/245 (20%)
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
++ R C P++ +Y L + FL + + + + M+ +G P+
Sbjct: 298 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRI--------INMMMTEGCNPNPSLF 349
Query: 258 NSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSF-------SYDYL-----I 297
NS++ Y A ++ ++M VVYN S S D L I
Sbjct: 350 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 409
Query: 298 HG--------------------LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+G LC G+ A +L EM RKGFVP + +Y+ +++ L
Sbjct: 410 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 469
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YT 396
+VE+ EM D TY ++D C+ G +A L +E+++ T
Sbjct: 470 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 529
Query: 397 YTKLL 401
YT L+
Sbjct: 530 YTALI 534
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ C G A E +K G+ PS +YN+LV L+ G+V+ + EM E
Sbjct: 180 LVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESG 239
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL--KELQNKNLIDGYTYTKLLDVLEDDFGNSIR 413
+D T +C+ GR +A+ ++ ++ + ++ + + L++ D S
Sbjct: 240 FCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFL 299
Query: 414 HHLR 417
H +R
Sbjct: 300 HRMR 303
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + K++ A V + M + P Y L F G ++ Y
Sbjct: 226 YNGVILLLCKTGKVAEAERVLREMISE---GIAPDGVIYTTLIDGFCKLGN---VSSAYR 279
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +M I PD + ++I G + V +A ++FH+M V P+ +Y
Sbjct: 280 -----LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM-VCKRLEPDEVTYTA 333
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G+ K A L ++M + G P+ +Y +L L GEV+ + L EM K
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
++ TY ++++ +C+ G +A+KL+K+++ D TYT L+D
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMD 441
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 13/237 (5%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E + V+ +M+ + +Y T+I F + +S A +F M+ + P +Y
Sbjct: 241 EAERVLREMI-SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK---ISPDFITY 296
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ G+ ME + LF +MV +EPD + ++I GY + +A
Sbjct: 297 TAVICGLCQTGR-------VMEADK-LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAF 348
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+ +QM + PN +Y L GLC G A EL EM RKG + +YNSLV+
Sbjct: 349 SLHNQM-LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNG 407
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
L G +++ VK + +M D +TY T++D C+ A +LL+++ ++ L
Sbjct: 408 LCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 23/260 (8%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
KLG + D + + +P F Y +I + ++ A +F M R
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDF----ITYTAVICGLCQTGRVMEADKLFHEMVCKR-- 323
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P +Y L + GK M+ L QM+ G+ P+I + ++ G
Sbjct: 324 -LEPDEVTYTALIDGYCKEGK--------MKEAFSLHNQMLQMGLTPNIVTYTALADGLC 374
Query: 266 LSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
V+ A + H+M G+ N ++Y+ L++GLC G A +L +M+ GF
Sbjct: 375 KCGEVDTANELLHEMCRKGLELNI----YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 430
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P + +Y +L+ A + E+ + L +M++++ +T+ +++ C G + KL
Sbjct: 431 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 490
Query: 383 LKELQNKNLI-DGYTYTKLL 401
LK + K ++ + TY L+
Sbjct: 491 LKWMLEKGIMPNATTYNSLI 510
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIK-------GYILSNHVNDALRIFHQMGVVYNYLPNSF 291
R LF +M+N G+ + S N I G ++ L++ +M + PN +
Sbjct: 166 RKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQI-KGLKPNPY 224
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ +I LC G+ A + EM +G P Y +L+ G V + EM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+++ DFITY V+ +C+ GR EA KL E+ K L D TYT L+D
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 336
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 122/280 (43%), Gaps = 15/280 (5%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
LF+ K+ + D TY + L E D + ++M+ E Y +I
Sbjct: 280 LFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK-RLEPDEVTYTALIDG 337
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
+ + K+ A F + P+I +Y L G+ ++T L
Sbjct: 338 YCKEGKMKEA---FSLHNQMLQMGLTPNIVTYTALADGLCKCGE--------VDTANELL 386
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
+M G+E +I++ NS++ G + +++ A+++ M V + P++ +Y L+ C
Sbjct: 387 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA-GFHPDAVTYTTLMDAYCK 445
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
A EL +M + P+ ++N L++ ++G +E+ K L M+EK + T
Sbjct: 446 SREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 505
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
Y +++ + C R ++ + + K ++ DG TY L+
Sbjct: 506 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 545
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 20/185 (10%)
Query: 156 MDDVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
+D V M + F Y T++ + ++R++ RA + + M + E +P++ +
Sbjct: 414 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR---ELQPTVVT 470
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
+N+L F G +E L K M+ GI P+ + NS+IK Y + N++
Sbjct: 471 FNVLMNGFCMSG--------MLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRAT 522
Query: 274 LRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
I+ M GVV P+ +Y+ LI G C K A L +M KGF + SYN+
Sbjct: 523 TEIYRGMCAKGVV----PDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNA 578
Query: 331 LVSAL 335
L+
Sbjct: 579 LIKGF 583
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 128/282 (45%), Gaps = 26/282 (9%)
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVV---NQML---ATPSFCGTEALYNTIIYFF 183
Q D TY I+ + A +DD V NQM+ TP+ ++N+++Y
Sbjct: 472 QHGLSPDVVTYGIL---IDALCKLGRVDDAVLKFNQMINDGVTPN----SVVFNSLVYGL 524
Query: 184 AEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK 243
+ +A +F M + RP++ +N + + G+ L
Sbjct: 525 CTVDRWEKAEELFFEMWDQ---GVRPNVVFFNTIMCNLCNEGQVMVAQR--------LID 573
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
M G+ P++ S N++I G+ L+ ++A ++ M V P+ SYD L+ G C
Sbjct: 574 SMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVM-VSVGLKPDLISYDTLLRGYCKT 632
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
GR NA L EM RKG P + +Y++++ L E + MI+ + D TY
Sbjct: 633 GRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTY 692
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+L+ +C+ EA K+ + L +K+L + T+T ++DVL
Sbjct: 693 NIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVL 734
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 23/266 (8%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLS 190
+ D TY+ + L A+ + V+ M+ P YNTII +A+ +
Sbjct: 266 KPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV----VTYNTIIDGLCKAQAVD 321
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
RA V ++M + + +P I++YN L +LS G+ + E +R L ++M G+
Sbjct: 322 RADGVLQHMIDK---DVKPDIQTYNCLIHGYLSTGE-------WKEVVRRL-EEMYARGL 370
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+PD+ + + ++ + +A +IF+ M + PN Y L+HG A+G +
Sbjct: 371 DPDVVTYSLLLDYLCKNGKCTEARKIFYCM-IRKGIKPNVTIYGILLHGYAARGAIADLT 429
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
+L D M G P++ +N ++ A A ++E + M + D +TY ++D +
Sbjct: 430 DLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDAL 489
Query: 371 CRRGRAGEAMKLLKELQNKNLIDGYT 396
C+ GR +A+ ++ N DG T
Sbjct: 490 CKLGRVDDAVLKFNQMIN----DGVT 511
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 12/207 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTII +A+ + RA V ++M + + + +Y+ + +
Sbjct: 202 YNTIIDGLCKAQAVDRAEGVLQHMIDK---GVKLDVVTYSTIIDGLCKAQA--------V 250
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + M++ G++PD+ + N++I G + V+ A + M + P+ +Y+
Sbjct: 251 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHM-IDKGVKPDVVTYNT 309
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC A + M K P ++YN L+ GE +E V+ L EM +
Sbjct: 310 IIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARG 369
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKL 382
D +TY +LD +C+ G+ EA K+
Sbjct: 370 LDPDVVTYSLLLDYLCKNGKCTEARKI 396
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 15/236 (6%)
Query: 176 YNTIIYFFAEARKLSR---AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+N ++ A AR S AV +F M + + + RP + +Y+IL F G+ I H
Sbjct: 52 FNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGR---IEH 108
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ F ++ G + +N ++ G + V++A+ I + + +PN S
Sbjct: 109 GFAA-----FGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVS 163
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKG---FVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ L+ GLC + R + A EL M G P+ +YN+++ L V+ L
Sbjct: 164 CNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQ 223
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
MI+K +D +TY T++D +C+ A +L+ + +K + D TY ++D L
Sbjct: 224 HMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGL 279
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ ++ + + K + A +F M +P++ Y IL + +RG +
Sbjct: 377 YSLLLDYLCKNGKCTEARKIFYCMIRK---GIKPNVTIYGILLHGYAARGA--------I 425
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L MV +GI P+ + N ++ Y +++A+ IF +M + P+ +Y
Sbjct: 426 ADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQ-HGLSPDVVTYGI 484
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI LC GR +A ++M G P+S +NSLV L E+ + +EM ++
Sbjct: 485 LIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG 544
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ + + T++ +C G+ A +L+ ++
Sbjct: 545 VRPNVVFFNTIMCNLCNEGQVMVAQRLIDSME 576
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 86/236 (36%), Gaps = 82/236 (34%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I A + A + M + + +P + SY+ L + G+ I++ Y
Sbjct: 587 YNTLIGGHCLAGRTDEAAQLLDVMVS---VGLKPDLISYDTLLRGYCKTGR---IDNAY- 639
Query: 236 ETIRCLFKQMVNDGIEP-----------------------------------DIFSLNSM 260
CLF++M+ G+ P DI++ N +
Sbjct: 640 ----CLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNII 695
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL-------- 312
+ G +N V++A +IF + + PN ++ +I L GR K+A +L
Sbjct: 696 LNGLCKTNCVDEAFKIFQSL-CSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHG 754
Query: 313 --------------------CDE-------MKRKGFVPSSKSYNSLVSALALNGEV 341
DE M++ G P S N+++ +L GE+
Sbjct: 755 LVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEI 810
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 125/258 (48%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L+ + M S
Sbjct: 154 KDGDIRVAQSVFDAITKWGLRPSVVS----YNTLMNGYIRLGDLNEGFRLKSAMLAS--- 206
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P+ + ++I G+
Sbjct: 207 GVQPDVYTYSVLINGLCKESK--------MDDANELFDEMLVKGLIPNGVTFTTLIDGHC 258
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + LP+ +Y+ LI+GL +G K A +L DEM KG P
Sbjct: 259 KNGRVDLAMEIYKQM-LSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDK 317
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 318 FTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 377
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + L D TYT +++
Sbjct: 378 MLSVGLKPDDRTYTMIIN 395
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
++KQM++ + PD+ + N++I G + A + +M + P+ F+Y LI G
Sbjct: 269 IYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSM-KGLKPDKFTYXTLIDGC 327
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A E M ++ +Y +L+S L G + K L EM+ D
Sbjct: 328 CKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDD 387
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQ 387
TY +++E C++G + KLLKE+Q
Sbjct: 388 RTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF-----HQMGVVYN---------------------- 285
DI+ L+ +I Y+ S + DA+ + H++ V ++
Sbjct: 71 DIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 286 -------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS SYN+L++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G++ E + M+ D TY +++ +C+ + +A +L E+ K LI +G T+
Sbjct: 191 GDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 250
Query: 398 TKLLD 402
T L+D
Sbjct: 251 TTLID 255
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 89/163 (54%), Gaps = 2/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF +MV G+ PD ++ ++I+GY +++ AL +F M V N P+ +Y+ LI G
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM-VRTNLKPDKVTYNTLIDGF 547
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G A+EL D+M RK +P SY ++++ +G + E + +M+EK +
Sbjct: 548 CKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNL 607
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+T T++ CR G +A + L ++ + +I D ++Y L+D
Sbjct: 608 VTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLID 650
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 22/286 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY+ L KM+ + D + N+M+ P F + T+I + + + +A
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF----YTFTTLIRGYCKDGNMDKA 521
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F+ M + NL +P +YN L F G+ M + L+ M+ I P
Sbjct: 522 LNLFEAMVRT-NL--KPDKVTYNTLIDGFCKAGE--------MGRAKELWDDMIRKDIIP 570
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D S +++ G+ S + +AL + QM + PN + + LI G C G A E
Sbjct: 571 DHISYGTVLNGFCSSGLLPEALNLCDQM-LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY 629
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+M G +P S SYN+L+ +E+ + EM ++ + ITY +L+ C
Sbjct: 630 LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCA 689
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLLD--VLEDDFGNSIRHH 415
G+ EA ++L+++ + DG TY+ L++ V +D+ + R H
Sbjct: 690 EGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFH 735
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
I +YN L A+ G +E L + G+EP + + N+++ G
Sbjct: 292 IVTYNTLINAYCREG--------LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKY 343
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ A + +M + PN+ +Y+ L+ +C + A+E+ DEM R+G +P S++S
Sbjct: 344 DRAKDVLIEM-LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ LA NG + + + + EM D + Y ++D CR G +A+K+ E+ +
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Query: 391 -LIDGYTYTKLLDVL 404
+D TY L+ L
Sbjct: 463 CFMDVVTYNTFLNGL 477
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 20/267 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T +IM L + ++ + ++ M F YNT+I + + A +
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADI-VTYNTLINAYCREGLVEEAFQLLNS 317
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+SR +E P + +YN + GK V +E M+ G+ P+ + N
Sbjct: 318 F-SSRGME--PGLLTYNAILYGLCKIGKYDRAKDVLIE--------MLQLGLTPNAATYN 366
Query: 259 SMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+++ +++ +A IF +M GV LP+ S+ LI L G A E
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRRGV----LPDLVSFSSLIGVLARNGHLYQALMHFRE 422
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+R G VP + Y L+ NG + + +K EM+ + +D +TY T L+ +C++
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
+A L E+ + ++ D YT+T L+
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLI 509
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 54/261 (20%)
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKN 201
M RK G +++ VV +++T + G+ L Y+ ++ + +A+KL F+ +
Sbjct: 161 MVRKSGVSRV-----KVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQIL-- 213
Query: 202 SRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMI 261
R SI + N L + G +Y E +R GIE ++++LN M+
Sbjct: 214 -RRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVR--------GGIELNVYTLNIMV 264
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+ LC + +N +M+ KG
Sbjct: 265 ------------------------------------NALCKDRKFENVMFFLSDMEGKGV 288
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+YN+L++A G VEE + L + +TY +L +C+ G+ A
Sbjct: 289 FADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKD 348
Query: 382 LLKELQNKNLI-DGYTYTKLL 401
+L E+ L + TY LL
Sbjct: 349 VLIEMLQLGLTPNAATYNTLL 369
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 12/150 (8%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
NT+I + + + +A ++Y+ + P SYN L + Y+ +E
Sbjct: 611 NTLIKGYCRSGDMPKA---YEYLSKMISNGIIPDSFSYNTLI--------DGYLKEANLE 659
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
L +M G++ +I + N ++ G+ + +A ++ +M + P+ +Y L
Sbjct: 660 KAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKM-IEIGINPDGATYSSL 718
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
I+G +Q K A DEM ++G VP +
Sbjct: 719 INGHVSQDNMKEAFRFHDEMLQRGLVPDDR 748
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 121/238 (50%), Gaps = 18/238 (7%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSR-NLEC-------RP 209
D++ +M+++ C NT++ + KL A+ +FK M+ S+ +++ P
Sbjct: 417 DLLQEMVSS-GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEP 475
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+++YNIL + ++ GK ++E L+++M + GI PD + NS+I G +
Sbjct: 476 DVQTYNILISGLINEGK-------FLEAEE-LYEEMPHRGIVPDTITYNSVIHGLCKQSR 527
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+++A ++F MG ++ PN ++ LI+G C GR + EL EM R+G V ++ +Y
Sbjct: 528 LDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 586
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+L+ G + + EM+ D IT R +L + + A+ +L++LQ
Sbjct: 587 TLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 139/318 (43%), Gaps = 42/318 (13%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
+L ++ + D TY+ + + E +++ ++ML T Y+++I
Sbjct: 276 QLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPST-ITYSSMID 334
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF-------------------- 221
F + +L A ++F M C P I ++N L +
Sbjct: 335 GFCKQNRLDAAEHMFYLMATKG---CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 391
Query: 222 LSRGKNTYINHVY-------METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
L TY ++ + + L ++MV+ G+ P++ + N+++ G + + DAL
Sbjct: 392 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDAL 451
Query: 275 RIFHQM---------GVVYNYL-PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+F M +N + P+ +Y+ LI GL +G+ A EL +EM +G VP
Sbjct: 452 EMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 511
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ +YNS++ L ++E + M K + +T+ T+++ C+ GR + ++L
Sbjct: 512 TITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 571
Query: 385 ELQNKNLI-DGYTYTKLL 401
E+ + ++ + TY L+
Sbjct: 572 EMGRRGIVANAITYITLI 589
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 21/221 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I+ F + L+ A + + M +S P++ + N L GK +
Sbjct: 399 YTTLIHGFCQVGDLNAAQDLLQEMVSSGVC---PNVVTCNTLLDGLCDNGKLKD----AL 451
Query: 236 ETIRCLFKQMVN-------DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYN 285
E + + K ++ +G+EPD+ + N +I G I +A ++ +M G+V
Sbjct: 452 EMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV-- 509
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P++ +Y+ +IHGLC Q R A ++ D M K F P+ ++ +L++ G V++ +
Sbjct: 510 --PDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 567
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ EM + + ITY T++ + G A+ + +E+
Sbjct: 568 ELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEM 608
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 31/251 (12%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
F T ++T+++ ++S A+ +F M C+P++ ++ L G+
Sbjct: 143 GFHPTVVTFSTLLHGLCVEDRISEALDLFHQM-------CKPNVVTFTTLMNGLCREGR- 194
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
+E + L +M+ DG++P+ + +++ G AL + +M V +
Sbjct: 195 ------VVEAV-ALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIK 247
Query: 288 PNSFSYDY-----LIHGLCAQGRTKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEV 341
PN + +I+G C+ GR A++L EM +RK P +YN+L++A G+
Sbjct: 248 PNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKF 307
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------L 391
E + EM+ + ITY +++D C++ R A + + K L
Sbjct: 308 FEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTL 367
Query: 392 IDGYTYTKLLD 402
I GY K +D
Sbjct: 368 IAGYCRAKRVD 378
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 43/255 (16%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYIN-HVYMET--- 237
F E + L A+ +F M SR L PS+ + L + G+ + I+ H ME
Sbjct: 53 FHEIKGLEDAIDLFGDMVRSRPL---PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRV 109
Query: 238 ----------IRCL------------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
++C F ++ G P + + ++++ G + + +++AL
Sbjct: 110 PCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALD 169
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+FHQM PN ++ L++GLC +GR A L D M G P+ +Y ++V +
Sbjct: 170 LFHQM-----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224
Query: 336 ALNGEVEETVKNLWEM-----IEKQRPVDFITYRT-VLDEICRRGRAGEAMKLLKELQNK 389
G+ + L +M I+ + + RT +++ C GR EA +LL+E+ +
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLER 284
Query: 390 NLI--DGYTYTKLLD 402
I D TY L++
Sbjct: 285 KKISPDVVTYNALIN 299
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 16/238 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI-----LFTAFLSRGKNTYI 230
Y TI+ + A+ + + M+ ++ +P++ + + + F S G+
Sbjct: 217 YGTIVDGMCKMGDTVSALNLLRKMEEVSHI--KPNVVIWPLERRTCMINGFCSSGR---- 270
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
+ E + L + + I PD+ + N++I ++ +A ++ +M + +P++
Sbjct: 271 ---WSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEM-LPRGIIPST 326
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y +I G C Q R A + M KG P ++N+L++ V++ +K L E
Sbjct: 327 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 386
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLEDD 407
M E + ITY T++ C+ G A LL+E+ + + + T LLD L D+
Sbjct: 387 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDN 444
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 131/278 (47%), Gaps = 14/278 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY I+ A + ++ + +M + T Y +I+ + +A+++ +A +
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSV-GCSPTVVTYTALIHAYLKAKQVPQANDI 380
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC--------LFKQMVN 247
F M ++ CRP+ +Y L G + VY + I F
Sbjct: 381 FHRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 437
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+ P++ + +++ G ++ V+ A + M + PN YD LI G C G+
Sbjct: 438 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM-LSSGCEPNHIVYDALIDGFCKAGKID 496
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A+E+ +M + G++PS +Y SL+ + +G ++ +K L +M++ + +TY ++
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +CR G + +A+KLL ++ K + TYT L+D L
Sbjct: 557 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++ +A K+ A + M +S C P+ Y+ L F GK V++
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSG---CEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +C G P + + S+I ++ A+++ QM + + PN +Y
Sbjct: 504 QMTKC--------GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM-LKDSCTPNVVTYTA 554
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC G ++ A +L M+ KG P+ +Y +L+ L G+++ ++ +M K
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+++TYR +++ +C G +A LL E++
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQ 647
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 120/277 (43%), Gaps = 25/277 (9%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFC-GTEALYNTIIYFFAEARKLSRAVYVFK 197
TY + AK + +D+ ++M+ + C + Y ++ +A +S+A V+
Sbjct: 360 TYTALIHAYLKAKQVPQANDIFHRMV--DAGCRPNDVTYGALVDGLCKAGNISKAFEVYA 417
Query: 198 YMKNSRN-------LECR------PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQ 244
+ + + C P++ +Y L K ++H + L
Sbjct: 418 KLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK---VDHAHE-----LLDA 469
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M++ G EP+ +++I G+ + ++ A +F QM YLP+ +Y LI + G
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM-TKCGYLPSVHTYTSLIDRMFKDG 528
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R A ++ +M + P+ +Y +++ L GE E+ +K L M EK + +TY
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
++D + + G+ ++ L ++ K Y ++L
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 625
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 40/262 (15%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
++N M+ T +L+N++++ + + + Y +K + C P YNI
Sbjct: 164 IINMMM-TEGCNPNPSLFNSLVHSYCNEKDYA---YAYKLLNRMTTCGCPPGYVVYNIFI 219
Query: 219 TAFLSRGK--------------------NTYINHVYMETI-RCL------------FKQM 245
+ + K N +N V + RCL K+M
Sbjct: 220 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 279
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
+ G PD + + +I + V A +F +M +V P+ ++Y LI C G
Sbjct: 280 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMV-GVTPDVYTYTILIDSFCKAGL 338
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ-RPVDFITYR 364
+ A+ L +EM+ G P+ +Y +L+ A +V + M++ RP D +TY
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND-VTYG 397
Query: 365 TVLDEICRRGRAGEAMKLLKEL 386
++D +C+ G +A ++ +L
Sbjct: 398 ALVDGLCKAGNISKAFEVYAKL 419
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRAVYV 195
TY + L A ++++ ML++ G E +Y+ +I F +A K+ A V
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSS----GCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M L PS+ +Y L G+ ++ + QM+ D P++
Sbjct: 502 FLQMTKCGYL---PSVHTYTSLIDRMFKDGR--------LDLAMKVLSQMLKDSCTPNVV 550
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +MI G AL++ M PN +Y LI GL G+ + +L +
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEE-KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQ 609
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M RKG P+ +Y L++ L G +++ L EM + P YR + +
Sbjct: 610 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI 669
Query: 376 AGEAMKLLKELQNKNLID-GYTYTKLLD 402
A ++ +L+E+++ + Y L+D
Sbjct: 670 A--SLGILEEMESYGTVPIAPVYGMLID 695
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 49/245 (20%)
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
++ R C P++ +Y L + FL + + + + M+ +G P+
Sbjct: 129 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRI--------INMMMTEGCNPNPSLF 180
Query: 258 NSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSF-------SYDYL-----I 297
NS++ Y A ++ ++M VVYN S S D L I
Sbjct: 181 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 240
Query: 298 HG--------------------LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+G LC G+ A +L EM RKGFVP + +Y+ +++ L
Sbjct: 241 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 300
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YT 396
+VE+ EM D TY ++D C+ G +A L +E+++ T
Sbjct: 301 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 360
Query: 397 YTKLL 401
YT L+
Sbjct: 361 YTALI 365
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
D +K G+ PS +YN+LV L+ G+V+ + EM E +D T +C+
Sbjct: 29 DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88
Query: 374 GRAGEAMKLL--KELQNKNLIDGYTYTKLLDVLEDDFGNSIRHHLR 417
GR +A+ ++ ++ + ++ + + L++ D S H +R
Sbjct: 89 GRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMR 134
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 131/278 (47%), Gaps = 14/278 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY I+ A + ++ + +M + T Y +I+ + +A+++ +A +
Sbjct: 257 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSV-GCSPTVVTYTALIHAYLKAKQVPQANDI 315
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC--------LFKQMVN 247
F M ++ CRP+ +Y L G + VY + I F
Sbjct: 316 FHRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 372
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+ P++ + +++ G ++ V+ A + M + PN YD LI G C G+
Sbjct: 373 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM-LSSGCEPNHIVYDALIDGFCKAGKID 431
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A+E+ +M + G++PS +Y SL+ + +G ++ +K L +M++ + +TY ++
Sbjct: 432 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 491
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +CR G + +A+KLL ++ K + TYT L+D L
Sbjct: 492 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 529
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++ +A K+ A + M +S C P+ Y+ L F GK V++
Sbjct: 382 YGALVDGLCKAHKVDHAHELLDAMLSSG---CEPNHIVYDALIDGFCKAGKIDSAQEVFL 438
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +C G P + + S+I ++ A+++ QM + + PN +Y
Sbjct: 439 QMTKC--------GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM-LKDSCTPNVVTYTA 489
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC G ++ A +L M+ KG P+ +Y +L+ L G+++ ++ +M K
Sbjct: 490 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 549
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+++TYR +++ +C G +A LL E++
Sbjct: 550 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQ 582
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 118/276 (42%), Gaps = 23/276 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + AK + +D+ ++M+ + Y ++ +A +S+A V+
Sbjct: 295 TYTALIHAYLKAKQVPQANDIFHRMVDAGCR-PNDVTYGALVDGLCKAGNISKAFEVYAK 353
Query: 199 MKNSRN-------LECR------PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
+ + + C P++ +Y L K ++H + L M
Sbjct: 354 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK---VDHAHE-----LLDAM 405
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
++ G EP+ +++I G+ + ++ A +F QM YLP+ +Y LI + GR
Sbjct: 406 LSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC-GYLPSVHTYTSLIDRMFKDGR 464
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A ++ +M + P+ +Y +++ L GE E+ +K L M EK + +TY
Sbjct: 465 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTA 524
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
++D + + G+ ++ L ++ K Y ++L
Sbjct: 525 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 560
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 39/247 (15%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------- 226
+L+N++++ + + + Y +K + C P YNI + + K
Sbjct: 113 SLFNSLVHSYCNEKDYA---YAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLL 169
Query: 227 -------------NTYINHVYMETI-RCL------------FKQMVNDGIEPDIFSLNSM 260
N +N V + RCL K+M+ G PD + + +
Sbjct: 170 DLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKV 229
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
I + V A +F +M +V P+ ++Y LI C G + A+ L +EM+ G
Sbjct: 230 ITFLCHATKVEKAFLLFQEMKMV-GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ-RPVDFITYRTVLDEICRRGRAGEA 379
P+ +Y +L+ A +V + M++ RP D +TY ++D +C+ G +A
Sbjct: 289 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND-VTYGALVDGLCKAGNISKA 347
Query: 380 MKLLKEL 386
++ +L
Sbjct: 348 FEVYAKL 354
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRAVYV 195
TY + L A ++++ ML++ G E +Y+ +I F +A K+ A V
Sbjct: 381 TYGALVDGLCKAHKVDHAHELLDAMLSS----GCEPNHIVYDALIDGFCKAGKIDSAQEV 436
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M L PS+ +Y L G+ ++ + QM+ D P++
Sbjct: 437 FLQMTKCGYL---PSVHTYTSLIDRMFKDGR--------LDLAMKVLSQMLKDSCTPNVV 485
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +MI G AL++ M PN +Y LI GL G+ + +L +
Sbjct: 486 TYTAMIDGLCRIGESEKALKLLSLMEE-KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQ 544
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M RKG P+ +Y L++ L G +++ L EM + P YR + +
Sbjct: 545 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI 604
Query: 376 AGEAMKLLKELQNKNLID-GYTYTKLLD 402
A ++ +L+E+++ + Y L+D
Sbjct: 605 A--SLGILEEMESYGTVPIAPVYGMLID 630
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 49/245 (20%)
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
++ R C P++ +Y L + FL + + + + M+ +G P+
Sbjct: 64 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRI--------INMMMTEGCNPNPSLF 115
Query: 258 NSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSF-------SYDYL-----I 297
NS++ Y A ++ ++M VVYN S S D L I
Sbjct: 116 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 175
Query: 298 HG--------------------LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+G LC G+ A +L EM RKGFVP + +Y+ +++ L
Sbjct: 176 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 235
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YT 396
+VE+ EM D TY ++D C+ G +A L +E+++ T
Sbjct: 236 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 295
Query: 397 YTKLL 401
YT L+
Sbjct: 296 YTALI 300
>gi|356570227|ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77405-like [Glycine max]
Length = 732
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 126/303 (41%), Gaps = 32/303 (10%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY 176
PL LE F W + F H T + LG A + + + +P T A
Sbjct: 398 PLKALEFFRWVEARFNFPHSEPTCRELACLLGRANALKPLWHFLKH---SPHV--TTATV 452
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
+I E A+ F MK R C+P SYN L A GK T
Sbjct: 453 TCLIKLLGEQALADEALLTFHRMKQFR---CKPDTHSYNTLIHALCRVGKFT-------- 501
Query: 237 TIRCLFKQMVNDGIE--PDIFSLNSMIKGY----ILSN-------HVNDALRIFHQMGVV 283
R L +QM G PD F+ +I Y IL+ + +A R+F M +
Sbjct: 502 KARSLLQQMELPGFRCPPDTFTYTILISSYCRHGILTGCRKARRRRIYEAGRLFRLM-LF 560
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+P+ +Y+ LI G C R + A EL D+MKR+G VP+ +Y + + E+++
Sbjct: 561 RKLVPDVVTYNALIDGCCKTLRVERALELFDDMKRRGLVPNRVTYGCFIRYYCVVNEIDK 620
Query: 344 TVKNLWEMIEKQRPV-DFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
V+ L EM V +Y ++ +C GR EA L EL + ++ YTY +
Sbjct: 621 GVEMLREMQRLGHGVPGSSSYTPIIHALCEAGRVVEAWWFLVELVEGGSVPREYTYGLVC 680
Query: 402 DVL 404
D L
Sbjct: 681 DRL 683
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 129/314 (41%), Gaps = 33/314 (10%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L F W +QP F+HD TY M LG AK + ++ ++++M+ T YN +I
Sbjct: 333 LGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNT-VTYNRLI 391
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF-----TAFLSRGKNTYI----- 230
+ + A L+ A+ VFK M+ + C P +Y L FL + Y
Sbjct: 392 HSYGRANYLNEAMNVFKQMQEA---GCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAA 448
Query: 231 -----NHVYMETIRCL------------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y I CL F +MV G P++ + N MI + + + A
Sbjct: 449 GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETA 508
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
L+++ M + P+ +Y ++ L G + A + EM+RK +VP Y LV
Sbjct: 509 LKLYRDMQNA-GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 567
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
G VE+ + EM+ + T ++L R R EA LL+ + L
Sbjct: 568 LWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHP 627
Query: 394 GY-TYTKLLDVLED 406
TYT LL D
Sbjct: 628 SLQTYTLLLSCCTD 641
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-----YN 177
F WA+++ F HD+ TY+ M L + ++ M V+ +M GT+ L +
Sbjct: 181 FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-------GTKGLLTMETFT 233
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSR------NLEC------RPSI-RSYNILFTAFLSR 224
+ FA A++ +AV +F+ MK + + C R + + +LF R
Sbjct: 234 IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER 293
Query: 225 GKNTYINHVYMETIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ + + C ++ M++ G++PDI + N M++G + S +DA+
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 353
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
++FH M PN SY +I C Q + A E D+M G P + Y L++
Sbjct: 354 KLFHVMKS-KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+++ + L EM EK P D TY ++
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 108/280 (38%), Gaps = 57/280 (20%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
AA+++ +D+++Q L P +N ++ +RK S A+ +F MK+
Sbjct: 317 AARIW---NDMIDQGL-KPDIVA----HNVMLEGLLRSRKKSDAIKLFHVMKSKGPC--- 365
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++RSY I+ F + MET F MV+ G++PD +I G+
Sbjct: 366 PNVRSYTIMIRDFCKQSS--------METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 417
Query: 269 HVNDALRIFHQM--------GVVYNYL--------------------------PNSFSYD 294
++ + +M G YN L P+ +++
Sbjct: 418 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFN 477
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ + R + +EM +KG P SY L+ L G+ E + L EM++K
Sbjct: 478 MIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDK 537
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
I Y + R G+ ++ +EL + G
Sbjct: 538 GMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAKFSG 573
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%), Gaps = 16/239 (6%)
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
+ L A++++++M ++++L P YN ++ F + L A +F+ MK S N
Sbjct: 176 KVLEASRIFRDMQ--IDEVLGLPQ--PNIITYNLMLGGFCKEGMLEEARALFEKMKVSEN 231
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
L R SYNI + GK + + + K+MV+ G+EP+++S N ++ G
Sbjct: 232 LMNR---ESYNIWLLGLVRIGK--------LLEAQLVLKEMVDMGMEPNVYSYNIVMDGL 280
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ + DA R+ ++ LP++ +Y L+HG C G+ A + EM R G P+
Sbjct: 281 CKNGVLFDA-RMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPN 339
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ + N L+ +L G + E + L +M EK +D +T V+D +C G+ +A++++
Sbjct: 340 NYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIV 398
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
+A+ FK ++ R E PSI YN+L + G+ ++ + L K MV G
Sbjct: 1 GKAISQFKSLR-FRFPENPPSIYLYNVLLRSCTKEGR--------VDCVSWLCKDMVASG 51
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ P+ ++ N +I S ++DA +F +M PN +S+ L+ G C G T
Sbjct: 52 VSPETYTFNVLIGLLCDSGCLDDARELFDKM-PEKGCEPNEYSFGILVRGYCRAGFTSKG 110
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
EL EM+R GF P+ YN+L+S+ G+ ++ K + EM + D +T+ +
Sbjct: 111 LELLGEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISA 170
Query: 370 ICRRGRAGEAMKLLKELQ 387
+C G+ EA ++ +++Q
Sbjct: 171 LCSSGKVLEASRIFRDMQ 188
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 15/230 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ ++ + A S+ + + M R L P+ YN L ++F GK
Sbjct: 94 FGILVRGYCRAGFTSKGLELLGEM---RRLGFSPNKVVYNTLISSFCKEGKT-------- 142
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG---VVYNYLPNSFS 292
+ L +M DG+ PD+ + N+ I S V +A RIF M V+ PN +
Sbjct: 143 DDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIIT 202
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ ++ G C +G + AR L ++MK + + +SYN + L G++ E L EM+
Sbjct: 203 YNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMV 262
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ + +Y V+D +C+ G +A L++ + + ++ D TYT LL
Sbjct: 263 DMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLL 312
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD+ S +++I G + V +A + F +M + N P+S YD IH C +G+ +A
Sbjct: 431 PDLISYSTIISGLCKAGRVGEAKKKFIEM-MGKNLQPDSAIYDVFIHSFCKEGKISSAFR 489
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ +M++KG + ++YNSL+ L ++ E + EM E+ D Y VL +C
Sbjct: 490 VLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLC 549
Query: 372 RRGRAGEAMKLLKELQNKNL 391
GR +A +L E+ K +
Sbjct: 550 EGGRVKDAPSVLDEMLQKGI 569
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 125/310 (40%), Gaps = 71/310 (22%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY++M M +E + +M + + E+ YN + KL A V K
Sbjct: 202 TYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRES-YNIWLLGLVRIGKLLEAQLVLKE 260
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M ++ P++ SYNI+ G + R L + M + G+ PD +
Sbjct: 261 M---VDMGMEPNVYSYNIVMDGLCKNG--------VLFDARMLMRLMTSSGVLPDTVTYT 309
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+++ GY + V++A + +M + PN+++ + L++ L +GR A EL +M
Sbjct: 310 TLLHGYCHTGKVSEANNVLREM-MRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNE 368
Query: 319 KGFVPSSKSYNSLVSALALNGEVE---ETVKNLWE---------------MIE-----KQ 355
KG+V + + N ++ L NG+++ E V +W +++ K+
Sbjct: 369 KGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKK 428
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMK---------------------------------- 381
D I+Y T++ +C+ GR GEA K
Sbjct: 429 CMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAF 488
Query: 382 -LLKELQNKN 390
+LK+++ K
Sbjct: 489 RVLKDMEKKG 498
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 50/276 (18%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
F + +YNT+I F + K A + M R P + ++N +A S GK
Sbjct: 121 GFSPNKVVYNTLISSFCKEGKTDDAEKLVDEM---RKDGLSPDVVTFNARISALCSSGK- 176
Query: 228 TYINHVYMETIRCLFKQMVNDGI----EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
+E R +F+ M D + +P+I + N M+ G+ + +A +F +M V
Sbjct: 177 ------VLEASR-IFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVS 229
Query: 284 YNYL----------------------------------PNSFSYDYLIHGLCAQGRTKNA 309
N + PN +SY+ ++ GLC G +A
Sbjct: 230 ENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDA 289
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
R L M G +P + +Y +L+ G+V E L EM+ + T +L
Sbjct: 290 RMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYS 349
Query: 370 ICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
+ + GR EA +LL+++ K +ID T ++D L
Sbjct: 350 LWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGL 385
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P I+ N +++ V+ + M V P +++++ LI LC G +ARE
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDM-VASGVSPETYTFNVLIGLLCDSGCLDDARE 77
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L D+M KG P+ S+ LV G + ++ L EM + + Y T++ C
Sbjct: 78 LFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFC 137
Query: 372 RRGRAGEAMKLLKELQNKNL 391
+ G+ +A KL+ E++ L
Sbjct: 138 KEGKTDDAEKLVDEMRKDGL 157
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 53/267 (19%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+TII +A ++ A F M +NL+ P Y++ +F GK + V
Sbjct: 436 YSTIISGLCKAGRVGEAKKKFIEMM-GKNLQ--PDSAIYDVFIHSFCKEGKISSAFRV-- 490
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
K M G + + NS+I G N + + + +M GV P+
Sbjct: 491 ------LKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVS----PDVSI 540
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA---------------LAL 337
Y+ ++ LC GR K+A + DEM +KG P+ S++ L+ A +AL
Sbjct: 541 YNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIAL 600
Query: 338 N-------------------GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
N GEV + + +++ V Y+ ++D +C+ + +
Sbjct: 601 NVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDD 660
Query: 379 AMKLLKELQNKN-LIDGYTYTKLLDVL 404
A +L +L +K D ++ ++D L
Sbjct: 661 ASGILHKLIDKGYWFDPASFMPVIDGL 687
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 98/247 (39%), Gaps = 46/247 (18%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A+Y+ I+ F + K+S A F+ +K+ C ++++YN L S+ N +
Sbjct: 469 AIYDVFIHSFCKEGKISSA---FRVLKDMEKKGCNKTLQTYNSLIMGLGSK------NQI 519
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ I L +M G+ PD+ N+++ V DA + +M + PN S+
Sbjct: 520 F--EIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEM-LQKGISPNISSF 576
Query: 294 DYLIHGLC----------------------------------AQGRTKNARELCDEMKRK 319
LI C G A+EL + +
Sbjct: 577 SILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDR 636
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
F + Y L+ L + ++++ L ++I+K D ++ V+D + +RG EA
Sbjct: 637 SFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEA 696
Query: 380 MKLLKEL 386
+L +++
Sbjct: 697 DELAEKM 703
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 17/280 (6%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
+D V L F W +QP F HD TY M LG A+ + ++ ++ QM+ C
Sbjct: 364 QDHSVALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVK--DGCQPNV 421
Query: 175 L-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+ YN +I+ + A L A+ VF M+ + C P +Y L G
Sbjct: 422 VTYNRLIHSYGRANYLGEALNVFNQMQ---EMGCEPDRVTYCTLIDIHAKAG-------- 470
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+++ ++++M G+ PD F+ + MI S +++ A R+F +M V +PN +Y
Sbjct: 471 FLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEM-VDQGCVPNIVTY 529
Query: 294 DYLIHGLCAQGRT-KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ LI L A+ R + A +L +M+ GF P +Y+ ++ L G +EE +EM
Sbjct: 530 NILI-ALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMK 588
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ D Y ++D + G +A + + L+
Sbjct: 589 QNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLL 628
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 26/270 (9%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A MY+ M +V L+ +F Y+ +I ++ LS A +F M + C
Sbjct: 475 AMSMYERMQEV---GLSPDTFT-----YSVMINCLGKSGNLSAAHRLFCEMVDQ---GCV 523
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD--IFSLNSMIKGYIL 266
P+I +YNIL A ++ +N +T L++ M N G +PD +S+ + GY
Sbjct: 524 PNIVTYNILI-ALQAKARN-------YQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYC- 574
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++ +A +F +M N++P+ Y LI G + A E M R G +P+
Sbjct: 575 -GYLEEAEAVFFEMKQ-NNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVP 632
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ NSL+SA + + L M+ TY T+L C ++ M EL
Sbjct: 633 TCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTY-TLLLSCCTEAQSPYDMGFCCEL 691
Query: 387 QNKNLIDGYTYTKLLDVLEDDFGNSIRHHL 416
+ + + + + D G ++R H+
Sbjct: 692 MAVSGHPAHAFLQSMPAAGPD-GQNVRDHV 720
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-----YN 177
F WA+++ F HD+ TY+ M L + ++ M V+ +M GT+ L +
Sbjct: 190 FFCWAAEKQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-------GTKGLLTMETFT 242
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSR------NLEC------RPSI-RSYNILFTAFLSR 224
+ FA A++ +AV +F+ MK + + C R + + +LF R
Sbjct: 243 IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER 302
Query: 225 GKNTYINHVYMETIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ + + C ++ M++ G++PDI + N M++G + S +DA+
Sbjct: 303 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 362
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
++FH M PN SY +I C Q + A E D+M G P + Y L++
Sbjct: 363 KLFHVMKS-KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 421
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+++ + L EM EK P D TY ++
Sbjct: 422 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 454
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 17/186 (9%)
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
DD+V+ L + A+Y +I F +KL + K M+ + P ++YN
Sbjct: 401 DDMVDSGLQPDA-----AVYTCLITGFGTQKKLDTVYELLKEMQEKGH---PPDGKTYNA 452
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
L ++ + +Y +M+ + IEP I + N ++K Y ++ + +
Sbjct: 453 LIKLMANQKMPEHATRIY--------NKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSAV 504
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
+ +M + P+ SY LI GL +G+++ A +EM KG YN +
Sbjct: 505 WDEM-IKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFH 563
Query: 337 LNGEVE 342
G+ E
Sbjct: 564 KGGQPE 569
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 107/280 (38%), Gaps = 57/280 (20%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
AA+++ +D+++Q L P +N ++ +RK S A+ +F MK+
Sbjct: 326 AARIW---NDMIDQGL-KPDIVA----HNVMLEGLLRSRKKSDAIKLFHVMKSKGPC--- 374
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++RSY I+ F + MET F MV+ G++PD +I G+
Sbjct: 375 PNVRSYTIMIRDFCKQSS--------METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 426
Query: 269 HVNDALRIFHQM--------GVVYNYL--------------------------PNSFSYD 294
++ + +M G YN L P+ +++
Sbjct: 427 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFN 486
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ + + DEM +KG P SY L+ L G+ E + L EM++K
Sbjct: 487 MIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDK 546
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
I Y + + G+ ++ +EL + G
Sbjct: 547 GMKTPLIDYNKFAADFHKGGQP----EIFEELAQRAKFSG 582
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + +++ L AF+ GK +Y E MV I+P I + +S+I G+ + +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDE--------MVKRSIDPSIVTYSSLINGFCMHD 375
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A ++F M V + P+ SY LI G C R EL EM ++G V ++ +Y
Sbjct: 376 RLDEAKQMFEFM-VSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ L G+ + + EM+ P + +TY T+LD +C+ G+ +AM + + LQ
Sbjct: 435 TTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 389 KNLIDG-YTYTKLLD 402
+ YTY +++
Sbjct: 495 SKMEPTIYTYNIMIE 509
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI--------------NH- 232
KL AV +F M SR PSI ++ L +A K + NH
Sbjct: 61 KLDDAVALFGEMVKSRPF---PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHY 117
Query: 233 VYMETIRC------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
Y I C + +M+ G EP+I +L+S++ GY S +++A+ + QM
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
V Y PN+ +++ LIHGL + A L D M KG P +Y +V+ L G+
Sbjct: 178 -FVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
+ L +M + + + Y T++D +C+ +A+ L KE++ K + + TY+
Sbjct: 237 TDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 400 LLDVL 404
L+ L
Sbjct: 297 LISCL 301
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 24/219 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I F +A+++ + +F+ M + R L + +Y L G +
Sbjct: 399 YSTLIKGFCKAKRVDEGMELFREM-SQRGL--VGNTVTYTTLIQGLFQAGDCDMAQEI-- 453
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL------PN 289
FK+MV+DG+ P+I + N+++ G + + A+ VV+ YL P
Sbjct: 454 ------FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM-------VVFEYLQRSKMEPT 500
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
++Y+ +I G+C G+ ++ +L + KG P +YN+++S G EE
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
EM E + Y T++ R G + +L+KE+++
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 46/262 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I F +L A+ V M L P+I + + L N Y + +
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKM---MKLGYEPNIVTLSSLL--------NGYCHSKRI 167
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------------GVV 283
L QM G +P+ + N++I G L N ++A+ + +M GVV
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVV 227
Query: 284 YNYL----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
N L P Y +I GLC +A L EM+ KG
Sbjct: 228 VNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGI 287
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P+ +Y+SL+S L G + + L +MIE++ D T+ ++D + G+ EA K
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 382 LLKELQNKNLIDG-YTYTKLLD 402
L E+ +++ TY+ L++
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLIN 369
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 13/169 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + KL +A+ VF+Y++ S+ P+I +YNI+ GK +
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSK---MEPTIYTYNIMIEGMCKAGK--------V 517
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF + G++PD+ + N+MI G+ +A +F +M LPNS Y+
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYNT 576
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
LI G + + EL EM+ GF + + LV+ + +G ++++
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 624
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML + T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKML-SEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTII-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K++I
Sbjct: 306 NLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDII 358
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 17/299 (5%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
+ L F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 3 IRNLVSSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRA---S 59
Query: 155 EMDDVVNQMLATP--SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
+++ +L P E ++ +I + + + +V +F+ M+ L +I+
Sbjct: 60 KLNHARCILLDIPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKME---ELGVERTIK 116
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
SYN LF L RG+ YM R F +M+++GIEP + N MI G+ LS V
Sbjct: 117 SYNALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVET 168
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A R F M P+ +Y+ +I+G + + A + EMK + P+ +Y +L+
Sbjct: 169 ANRFFEDMK-SREISPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLI 227
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 228 KGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYL 286
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ + G+E D MI Y V +++++F +M G
Sbjct: 56 GRASKLNHA-----RCILLDIPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 110
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR A+ ++M +G P+ ++N ++ L+G+V
Sbjct: 111 VERTIK----SYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 166
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E + +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 167 ETANRFFEDMKSREISPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 226
Query: 401 L 401
+
Sbjct: 227 I 227
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 13/290 (4%)
Query: 102 FNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVN 161
F++E + NV+ + F W + F H+ T+ + LG A ++
Sbjct: 2 FDHELVYNVLHSSKTSEHAFHFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 61
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
M E ++ +I + + + +V +F+ M+ L +I+SYN LF
Sbjct: 62 DM-PKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEE---LGVERTIKSYNALFKVI 117
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
L RG+ YM R F +M+++GIEP + N MI G+ LS V A+R F M
Sbjct: 118 LRRGR-------YMMGKR-YFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMK 169
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
P+ +Y+ +I+G + + A + EMK + P+ +Y +L+ +V
Sbjct: 170 S-REISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQV 228
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 229 DDALRLVEEMKGFGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYL 278
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A+ F+ MK+ E P + +YN +
Sbjct: 131 NKMLSE-GIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSR---EISPDVVTYNTMI-- 184
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y ME F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 185 ------NGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 238
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+S+ +G
Sbjct: 239 KG-FGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSG 297
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL +L K+++
Sbjct: 298 NLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIM 350
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---G 281
G+ + +NH RC+ M G+E D MI Y V +++++F +M G
Sbjct: 48 GRASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELG 102
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V SY+ L + +GR + ++M +G P+ ++N ++ L+G+V
Sbjct: 103 VERTIK----SYNALFKVILRRGRYMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKV 158
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E ++ +M ++ D +TY T+++ R + EA K E++ +N+ TYT L
Sbjct: 159 ETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTL 218
Query: 401 L 401
+
Sbjct: 219 I 219
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 127/265 (47%), Gaps = 16/265 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY I+ + +E +V+++M + YN +I + K+ A+ +F
Sbjct: 51 TYTILIDRFCKEGRLEEARNVLDEM-SGKGLALNAVGYNCLISALCKDEKVQDALNMFGD 109
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + C+P I ++N L K E L++ M+ +G+ + + N
Sbjct: 110 MSSKG---CKPDIFTFNSLIFGLCKVNK--------FEEALGLYQDMLLEGVIANTITYN 158
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMK 317
++I ++ + +AL++ + M ++ P + +Y+ LI LC G + L ++M
Sbjct: 159 TLIHAFLRRGAMQEALKLVNDM--LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 216
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG P++ S N L++ L G ++ ++ L +MI + D +TY ++++ +C+ GRA
Sbjct: 217 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQ 276
Query: 378 EAMKLLKELQNKNLI-DGYTYTKLL 401
EA+ L +LQ + + D TY L+
Sbjct: 277 EALNLFDKLQVEGICPDAITYNTLI 301
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
+ M++ G PDIF+ N++I G ++ A + ++M + PN +Y LI C
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM-QIKGCEPNVITYTILIDRFCK 61
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+GR + AR + DEM KG ++ YN L+SAL + +V++ + +M K D T
Sbjct: 62 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 121
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ +++ +C+ + EA+ L +++ + +I + TY L+
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLI 161
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N++I+ + K A+ +++ M + + +YN L AFL RG M
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVI---ANTITYNTLIHAFLRRGA--------M 170
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L M+ G D + N +IK + ++ L +F M + PN+ S +
Sbjct: 171 QEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDM-MSKGLNPNNISCNI 229
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC G ++A E +M +G P +YNSL++ L G +E + NL++ ++ +
Sbjct: 230 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL-NLFDKLQVE 288
Query: 356 RPV-DFITYRTVLDEICRRGRAGEAMKLL 383
D ITY T++ C+ G +A LL
Sbjct: 289 GICPDAITYNTLISWHCKEGMFDDAHLLL 317
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ D T++ + L ++E + ML T YNT+I+ F + A+
Sbjct: 116 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT-ITYNTLIHAFLRRGAMQEAL 174
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
K + + C +YN L A G +E LF+ M++ G+ P+
Sbjct: 175 ---KLVNDMLFRGCPLDDITYNGLIKALCRAGN--------IEKGLALFEDMMSKGLNPN 223
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
S N +I G + ++ AL M + P+ +Y+ LI+GLC GR + A L
Sbjct: 224 NISCNILINGLCRTGNIQHALEFLRDM-IHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 282
Query: 314 DEMKRKGFVPSSKSYNSLVS 333
D+++ +G P + +YN+L+S
Sbjct: 283 DKLQVEGICPDAITYNTLIS 302
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
TY+ + QE +VN ML P + YN +I A + + + +F
Sbjct: 156 TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPL---DDITYNGLIKALCRAGNIEKGLALF 212
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
+ M S+ L P+ S NIL G I H +E +R M++ G+ PDI +
Sbjct: 213 EDMM-SKGL--NPNNISCNILINGLCRTGN---IQHA-LEFLR----DMIHRGLTPDIVT 261
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
NS+I G + +AL +F ++ V P++ +Y+ LI C +G +A L
Sbjct: 262 YNSLINGLCKTGRAQEALNLFDKL-QVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRG 320
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVE 342
GF+P+ ++ LVS G+ E
Sbjct: 321 VDSGFIPNEVTWYILVSNFIKEGDQE 346
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 131/278 (47%), Gaps = 14/278 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY I+ A + ++ + +M + T Y +I+ + +A+++ +A +
Sbjct: 322 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSV-GCSPTVVTYTALIHAYLKAKQVPQANDI 380
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC--------LFKQMVN 247
F M ++ CRP+ +Y L G + VY + I F
Sbjct: 381 FHRMVDAG---CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 437
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+ P++ + +++ G ++ V+ A + M + PN YD LI G C G+
Sbjct: 438 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM-LSSGCEPNHIVYDALIDGFCKAGKID 496
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+A+E+ +M + G++PS +Y SL+ + +G ++ +K L +M++ + +TY ++
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +CR G + +A+KLL ++ K + TYT L+D L
Sbjct: 557 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++ +A K+ A + M +S C P+ Y+ L F GK V++
Sbjct: 447 YGALVDGLCKAHKVDHAHELLDAMLSSG---CEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +C G P + + S+I ++ A+++ QM + + PN +Y
Sbjct: 504 QMTKC--------GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM-LKDSCTPNVVTYTA 554
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC G ++ A +L M+ KG P+ +Y +L+ L G+++ ++ +M K
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+++TYR +++ +C G +A LL E++
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQ 647
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 120/277 (43%), Gaps = 25/277 (9%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFC-GTEALYNTIIYFFAEARKLSRAVYVFK 197
TY + AK + +D+ ++M+ + C + Y ++ +A +S+A V+
Sbjct: 360 TYTALIHAYLKAKQVPQANDIFHRMV--DAGCRPNDVTYGALVDGLCKAGNISKAFEVYA 417
Query: 198 YMKNSRN-------LECR------PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQ 244
+ + + C P++ +Y L K ++H + L
Sbjct: 418 KLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK---VDHAHE-----LLDA 469
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M++ G EP+ +++I G+ + ++ A +F QM YLP+ +Y LI + G
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC-GYLPSVHTYTSLIDRMFKDG 528
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R A ++ +M + P+ +Y +++ L GE E+ +K L M EK + +TY
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
++D + + G+ ++ L ++ K Y ++L
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 625
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 39/247 (15%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------- 226
+L+N++++ + + + Y +K + C P YNI + + K
Sbjct: 178 SLFNSLVHSYCNEKDYA---YAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLL 234
Query: 227 -------------NTYINHVYMETI-RCL------------FKQMVNDGIEPDIFSLNSM 260
N +N V + RCL K+M+ G PD + + +
Sbjct: 235 DLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKV 294
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
I + V A +F +M +V P+ ++Y LI C G + A+ L +EM+ G
Sbjct: 295 ITFLCHATKVEKAFLLFQEMKMV-GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ-RPVDFITYRTVLDEICRRGRAGEA 379
P+ +Y +L+ A +V + M++ RP D +TY ++D +C+ G +A
Sbjct: 354 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND-VTYGALVDGLCKAGNISKA 412
Query: 380 MKLLKEL 386
++ +L
Sbjct: 413 FEVYAKL 419
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRAVYV 195
TY + L A ++++ ML++ G E +Y+ +I F +A K+ A V
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSS----GCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M L PS+ +Y L G+ ++ + QM+ D P++
Sbjct: 502 FLQMTKCGYL---PSVHTYTSLIDRMFKDGR--------LDLAMKVLSQMLKDSCTPNVV 550
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +MI G AL++ M PN +Y LI GL G+ + +L +
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEE-KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQ 609
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M RKG P+ +Y L++ L G +++ L EM + P YR + +
Sbjct: 610 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI 669
Query: 376 AGEAMKLLKELQNKNLID-GYTYTKLLD 402
A ++ +L+E+++ + Y L+D
Sbjct: 670 A--SLGILEEMESYGTVPIAPVYGMLID 695
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 49/245 (20%)
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
++ R C P++ +Y L + FL + + + + M+ +G P+
Sbjct: 129 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRI--------INMMMTEGCNPNPSLF 180
Query: 258 NSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSF-------SYDYL-----I 297
NS++ Y A ++ ++M VVYN S S D L I
Sbjct: 181 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 240
Query: 298 HG--------------------LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+G LC G+ A +L EM RKGFVP + +Y+ +++ L
Sbjct: 241 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 300
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YT 396
+VE+ EM D TY ++D C+ G +A L +E+++ T
Sbjct: 301 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 360
Query: 397 YTKLL 401
YT L+
Sbjct: 361 YTALI 365
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
D +K G+ PS +YN+LV L+ G+V+ + EM E +D T +C+
Sbjct: 29 DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88
Query: 374 GRAGEAMKLL--KELQNKNLIDGYTYTKLLDVLEDDFGNSIRHHLR 417
GR +A+ ++ ++ + ++ + + L++ D S H +R
Sbjct: 89 GRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMR 134
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 137/311 (44%), Gaps = 45/311 (14%)
Query: 118 LVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFC-- 170
++ L +F WA Q F+H S Y+ + LG K ++ + ++V+ M L+ +F
Sbjct: 111 VLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQKKLLSKDTFALI 170
Query: 171 ---------GTEAL-----------------YNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
EA+ +N ++ +++R + A VF MK R
Sbjct: 171 SRRYARARKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKR- 229
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
P I+SY IL + +N VY E M ++G EPD+ + +I Y
Sbjct: 230 --FEPDIKSYTILLEGWGQELNLLRVNEVYGE--------MKDEGFEPDVVAYGIIINAY 279
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ ++A+R F++M N P+ + LI+GL ++ + +A E + K GF
Sbjct: 280 CKAKKYDEAVRFFNEMEQ-RNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLE 338
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ +YN+LV A + +E+ K + EM K + TY +L + R R EA ++ +
Sbjct: 339 APTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQRTKEAYEVYQ 398
Query: 385 ELQNKNLIDGY 395
++ + + Y
Sbjct: 399 KMSCEPTVSTY 409
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 118/293 (40%), Gaps = 55/293 (18%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
K+ RF D +Y I+ G +++V +M F Y II + +A+K
Sbjct: 226 KKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEM-KDEGFEPDVVAYGIIINAYCKAKK 284
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
AV F M+ RN C+PS + L S K + F++ +
Sbjct: 285 YDEAVRFFNEMEQ-RN--CKPSPHIFCSLINGLGSEKK--------LNDALEFFERSKSS 333
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGR 305
G + + N+++ Y S + DA + +M G+ PN+ +YD ++H L R
Sbjct: 334 GFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIG----PNARTYDIILHHLIRMQR 389
Query: 306 TKNARE--------------------------------LCDEMKRKGFVPSSKSYNSLVS 333
TK A E + DEMK KG +P ++SL++
Sbjct: 390 TKEAYEVYQKMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLIT 449
Query: 334 ALALNGEVEETVKNLWEMIEKQ-RPVDFITYR---TVLDEICRRGRAGEAMKL 382
AL +++E + EM++ RP + R T+LDE + A A+K+
Sbjct: 450 ALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADLAVKM 502
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++I+ A+ +F M + + + P ++N L A G ++V
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAMIHRKIM---PDQLTFNTLVDALCKEGMVVKAHYV-- 286
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
M+ ++PD+ + NS++ G+ L + + + +F M V +P+ SY
Sbjct: 287 ------VDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTM-VRKGCVPSVISYTT 339
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C A L +EM ++G +P + +YN+L+ L G + + + EM+
Sbjct: 340 LINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYG 399
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ D +TYR + D +C+ R EAM LLK ++ NL D + Y+ ++D
Sbjct: 400 QIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMD 447
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 130/318 (40%), Gaps = 49/318 (15%)
Query: 126 WASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
+A + D T++ + L M + VV+ M+ + YN+++
Sbjct: 253 YAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS-DLKPDVVTYNSLMDGHCL 311
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
++ + V VF M C PS+ SY L N Y M+ LF++M
Sbjct: 312 RSEMGKTVNVFDTMVRK---GCVPSVISYTTLI--------NGYCKIQIMDKAMGLFEEM 360
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY----DYL----- 296
G+ PD + N++I G + DA+ +FH+M VVY +P+ +Y DYL
Sbjct: 361 SQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM-VVYGQIPDLVTYRILFDYLCKNHR 419
Query: 297 -------------------IH-------GLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
IH G+C G + AR+L ++ KG P ++Y
Sbjct: 420 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 479
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+++ L G + E K EM E + TY + R A++L +E+ ++
Sbjct: 480 MINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRG 539
Query: 391 L-IDGYTYTKLLDVLEDD 407
ID T T L+++L DD
Sbjct: 540 FSIDVSTTTLLVEMLSDD 557
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 100/194 (51%), Gaps = 10/194 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PSI ++ L T+ ++R K + T+ L+KQM + GI + ++LN +I + N
Sbjct: 52 PSIVDFSKLLTS-ITRMK-------HYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLN 103
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A + + + Y P++ ++ LI GLC +G+ A +L D+M +GF P +Y
Sbjct: 104 RLGFAFSVLGDI-LKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTY 162
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L++ L G ++ L M ++ + Y T++D +C+ + EA+ L ++
Sbjct: 163 GTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLA 222
Query: 389 KNL-IDGYTYTKLL 401
K + + +TY+ L+
Sbjct: 223 KGISPNNFTYSSLI 236
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 52/258 (20%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L+R + F + + L +PS ++ L GK E ++ LF +M +
Sbjct: 102 LNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGK-------IGEALQ-LFDKMTGE 153
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL------------- 287
G +PD+ + ++I G + + A+R M VVY+ +
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEA 213
Query: 288 -------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
PN+F+Y LIHGLC G K A L M + +P ++N+LV A
Sbjct: 214 LSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDA 273
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN---- 390
L G V + + MI+ D +TY +++D C R G+ + + + K
Sbjct: 274 LCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPS 333
Query: 391 ------LIDGYTYTKLLD 402
LI+GY +++D
Sbjct: 334 VISYTTLINGYCKIQIMD 351
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 12/210 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I+ +L A+ +F M + P + +Y ILF +L + NH
Sbjct: 372 YNTLIHGLCHVGRLRDAIALFHEMVVYGQI---PDLVTYRILFD-YLCK------NHRLA 421
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L K + ++PDI + ++ G + + A +F ++ P+ +Y
Sbjct: 422 EAM-VLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSS-KGLHPDVRTYTI 479
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+GLC QG A +L EM G P++ +YN + N E ++ EM+ +
Sbjct: 480 MINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRG 539
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+D T +++ + G ++L E
Sbjct: 540 FSIDVSTTTLLVEMLSDDGLDQSVKQILCE 569
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 159/379 (41%), Gaps = 81/379 (21%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTR---KLG-AAKMYQEMDDVVNQ 162
LC V L + V ++ W F + TY+ + K+G KMY+ D ++ +
Sbjct: 240 LCKVGKLNKAGDVVDDMKVWG-----FWPNVVTYNTLIDGYCKMGRVGKMYKA-DAILKE 293
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
M+ +N +I F + LS A+ VF+ M+ S+ L +P++ +YN L
Sbjct: 294 MVEN-KVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQ-SQGL--KPTVVTYNSLVNGLC 349
Query: 223 SRGK---------------------------NTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ GK N Y +E R LF + G+ P++
Sbjct: 350 NEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVI 409
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT--------- 306
+ N+++ GY + +A + ++ + +LPN+ +Y+ LI G C +G+
Sbjct: 410 TFNTLLHGYCKFGKMEEAF-LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNE 468
Query: 307 --------------------------KNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
K A L DEM KG PS +YN L++ + G
Sbjct: 469 MQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGN 528
Query: 341 VEETVKNLWEMIEKQ-RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTK 399
+ + NL + +EK+ R + +TY ++ CR+G+ +A LL E+ K LI T +
Sbjct: 529 LRAAL-NLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE 587
Query: 400 LL--DVLEDDFGNSIRHHL 416
++ +++E F I HL
Sbjct: 588 IIKEEMMEKGFLPDIEGHL 606
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 45/320 (14%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL 175
DPL+ L FNW+ ++ + + L AK Y ++ +++ + + C +
Sbjct: 86 DPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLI 145
Query: 176 YNTIIYFFAE--ARKLSRAVYVFKYMKNSR---NLEC---------RPSIRSYNILFTAF 221
++++ + A + + V Y++NS+ LE + S+ S N L +A
Sbjct: 146 FHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSAL 205
Query: 222 LSRGKNTYINHVYMETIR-------CLFKQMVND--------------------GIEPDI 254
+ + + VY E IR F ++N G P++
Sbjct: 206 VKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNV 265
Query: 255 FSLNSMIKGYILSNHVNDALR---IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+ N++I GY V + I +M V PNS +++ LI G C A +
Sbjct: 266 VTYNTLIDGYCKMGRVGKMYKADAILKEM-VENKVSPNSVTFNVLIDGFCKDENLSAALK 324
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ +EM+ +G P+ +YNSLV+ L G++ E L EM+ + ITY +++ C
Sbjct: 325 VFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYC 384
Query: 372 RRGRAGEAMKLLKELQNKNL 391
++ EA +L + + L
Sbjct: 385 KKKLLEEARELFDNIGKQGL 404
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 144 TRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS- 202
TR L +A Y++ V+ +M+ F + Y+ ++ + A K+ A +F+ MK
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQ-GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 203 -------------------------------RNLECRPSIRSYNILFTAFLSRGKNTYIN 231
R + C P++ +Y L A+L K +Y N
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------GVVYN 285
LF+ M+++G P+I + +++I G+ + V A +IF +M V
Sbjct: 574 E--------LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 286 YL---------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
Y PN +Y L+ G C R + AR+L D M +G P+ Y++L+ L
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL-KELQNKNLIDGY 395
G+++E + EM E P TY +++D + R A K+L K L+N +
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 745
Query: 396 TYTKLLDVL 404
YT+++D L
Sbjct: 746 IYTEMIDGL 754
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 20/279 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY IM A + ++ N+M TP+ Y +I+ + +A+K+S A
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV----VTYTALIHAYLKAKKVSYA 572
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY--------METIRCLFKQ 244
+F+ M + C P+I +Y+ L G+ ++ + + FKQ
Sbjct: 573 NELFETMLSEG---CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
++ P++ + +++ G+ S+ V +A ++ M + PN YD LI GLC G
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM-EGCEPNQIVYDALIDGLCKVG 688
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ A+E+ EM GF + +Y+SL+ + K L +M+E + + Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
++D +C+ G+ EA KL++ ++ K + TYT ++D
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 55/260 (21%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNL-------------ECRPSIRSYNILFTAFL 222
Y+ +I +A ++ +A +F+ M S+++ RP++ +Y L F
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-- 280
+ +E R L M +G EP+ +++I G +++A + +M
Sbjct: 651 KSHR--------VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 281 ----GVVYNY----------------------------LPNSFSYDYLIHGLCAQGRTKN 308
+Y Y PN Y +I GLC G+T
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L M+ KG P+ +Y +++ + G++E ++ L M K +++TYR ++D
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 369 EICRRGRAGEAMKLLKELQN 388
C+ G A LL+E++
Sbjct: 823 HCCKNGALDVAHNLLEEMKQ 842
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 28/280 (10%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F D Y + L A +++E D +N+M AT Y+T++ ++L R
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV-VTYSTLLCGCLNKKQLGRC 356
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V M C PS + +N L A+ + G ++Y L K+MV G P
Sbjct: 357 KRVLNMMMMEG---CYPSPKIFNSLVHAYCTSGDHSYAYK--------LLKKMVKCGHMP 405
Query: 253 DIFSLNSMI------KGYILSNHVNDALRIFHQM---GVVYNYL-PNSFSYDYLIHGLCA 302
N +I K + + ++ A + + +M GVV N + +SF+ LC+
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT-----RCLCS 460
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
G+ + A + EM +GF+P + +Y+ +++ L ++E EM D T
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
Y ++D C+ G +A K E++ + TYT L+
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 134/333 (40%), Gaps = 23/333 (6%)
Query: 74 VGKRSKADSKPALDDTQFRCA---VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQ 130
+ R+ AD+ +DD R + + + + + + V+ L P + F WA +Q
Sbjct: 99 IDARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQ 158
Query: 131 PRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLS 190
++H A Y+ + + + ++ + Q+ E L N ++ S
Sbjct: 159 IGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFL-NVLVRKHCRNGSFS 217
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A+ +K+ R RPS +YN L AFL + +++ + ++M +
Sbjct: 218 IALEELGRLKDFRF---RPSRSTYNCLIQAFLKADR--------LDSASLIHREMSLANL 266
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
D F+L +AL + N++P++ Y LI GLC + A
Sbjct: 267 RMDGFTLRCFAYSLCKVGKWREALTLVE----TENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE--MIEKQRPVDFITYRTVLD 368
+ + M+ +P+ +Y++L+ LN + K + M+E P I + +++
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVLNMMMMEGCYPSPKI-FNSLVH 380
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
C G A KLLK++ + GY +L
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 111/286 (38%), Gaps = 59/286 (20%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII--YFFAEARKLSRAVYVFKYMKNSR 203
K+G QE V ++ F T Y+++I YF + + L+ V + K ++NS
Sbjct: 686 KVGKLDEAQE----VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV-LSKMLENS- 739
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
C P++ Y + GK + Y L + M G +P++ + +MI G
Sbjct: 740 ---CAPNVVIYTEMIDGLCKVGKT---DEAYK-----LMQMMEEKGCQPNVVTYTAMIDG 788
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ + + L + +MG PN +Y LI C G A L +EMK+ +
Sbjct: 789 FGMIGKIETCLELLERMGS-KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWE-------------------MIEKQRP------- 357
+ Y ++ N E E++ L E +I+ QR
Sbjct: 848 HTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLL 905
Query: 358 ----------VDFI-TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
VD+ TY ++++ +C + A +L E+ K +I
Sbjct: 906 EEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN- 289
N ++E++ L ++ D P + +I I + + ALR+ ++ L +
Sbjct: 860 NKEFIESLG-LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
S +Y+ LI LC + + A +L EM +KG +P +S+ SL+ L N ++ E +
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 117/227 (51%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ + +L A+ K++ + + +P++ ++NI+ + S G+ +M
Sbjct: 54 YNVLVNGMCKEGRLDEAI---KFLNSMPSYGSQPNVITHNIILRSMCSTGR-------WM 103
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + L +MV G P + + N +I + A+ I +M + PNS SY+
Sbjct: 104 DAEK-LLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPT-HGCTPNSLSYNP 161
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+HG C + + A + + M +G P +YN++++AL +G+V+ V+ L ++ K
Sbjct: 162 LLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG 221
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
ITY TV+D + + G+ +A++LL E++ K L D TY+ L+
Sbjct: 222 CSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLI 268
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 134/311 (43%), Gaps = 56/311 (18%)
Query: 122 ELFNWASKQPRF--RHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALY 176
E + + P + + + T++I+ R + + + + + ++ +M+ +PS +
Sbjct: 69 EAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV----VTF 124
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +I F L RA+ + + M C P+ SYN L F K M+
Sbjct: 125 NILINFLCRKGLLGRAIDILEKMPTHG---CTPNSLSYNPLLHGFCKEKK--------MD 173
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ MV+ G PDI + N+M+ V+ A+ + +Q+ P +Y+ +
Sbjct: 174 RAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSS-KGCSPVLITYNTV 232
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK---------- 346
I GL G+T A EL EM+ KG P +Y+SL++ L+ G+VEE +K
Sbjct: 233 IDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGV 292
Query: 347 ------------NLWEMIEKQRPVDF-------------ITYRTVLDEICRRGRAGEAMK 381
L + + R +DF ++Y +++ I G A EA++
Sbjct: 293 KPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALE 352
Query: 382 LLKELQNKNLI 392
LL EL ++ ++
Sbjct: 353 LLNELCSRGVV 363
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 95/196 (48%), Gaps = 10/196 (5%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C PS+ ++NIL +G + + ++M G P+ S N ++ G+
Sbjct: 117 CSPSVVTFNILINFLCRKG--------LLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCK 168
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++ A++ M V P+ +Y+ ++ LC G+ A EL +++ KG P
Sbjct: 169 EKKMDRAIQYLEIM-VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLI 227
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN+++ L+ G+ ++ V+ L EM K D ITY +++ + R G+ EA+K ++
Sbjct: 228 TYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDV 287
Query: 387 QNKNL-IDGYTYTKLL 401
+ + + +TY ++
Sbjct: 288 EGFGVKPNAFTYNSIM 303
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD+ + +I+ + V A+++ +MG P+ +Y+ L++G+C +GR A +
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGS-RGCKPDVVTYNVLVNGMCKEGRLDEAIK 72
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ M G P+ ++N ++ ++ G + K L EM+ K +T+ +++ +C
Sbjct: 73 FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLC 132
Query: 372 RRGRAGEAMKLLKEL 386
R+G G A+ +L+++
Sbjct: 133 RKGLLGRAIDILEKM 147
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+ +Y LI CA+ A +L DEM +G P +YN LV+ + G ++E +K
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L M + IT+ +L +C GR +A KLL E+ K
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKG 116
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
E+ D K P +Y L+ A V + +K L EM + D +TY +++ +
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61
Query: 371 CRRGRAGEAMKLLKEL 386
C+ GR EA+K L +
Sbjct: 62 CKEGRLDEAIKFLNSM 77
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + ++ A V MK L P I +YNI+ + +R K V
Sbjct: 140 YNAVISGFCKVNRIEAATQVLNRMKARGFL---PDIVTYNIMIGSLCNRRKLGLALKV-- 194
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
Q++ D P + + +I+ I+ +N+A+++ +M + LP+ ++Y+
Sbjct: 195 ------LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM-LARGLLPDMYTYNA 247
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C +G +L EM +G P+ +Y+ L+S+L G ++E + L MIEK+
Sbjct: 248 IIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 307
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLK-ELQNKNLIDGYTYTKLLDVL 404
D +Y ++ +C+ GR A+ ++ + N L D Y +L L
Sbjct: 308 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 357
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 13/253 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y+ + + V+N+M A F YN +I RKL A+ V
Sbjct: 136 DVFAYNAVISGFCKVNRIEAATQVLNRMKAR-GFLPDIVTYNIMIGSLCNRRKLGLALKV 194
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ C P++ +Y IL A + G IN E ++ L ++M+ G+ PD++
Sbjct: 195 LDQLLLDN---CMPTVITYTILIEATIVEGG---IN----EAMK-LLEEMLARGLLPDMY 243
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N++I+G ++ ++ +M PN +Y LI LC GR A +
Sbjct: 244 TYNAIIRGMCKEGMWDEGEKLVAEM-FSRGCEPNKVTYSILISSLCRFGRIDEAISVLKV 302
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M K P + SY+ L+SAL G ++ + + MI D + Y T+L +C+ G
Sbjct: 303 MIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGN 362
Query: 376 AGEAMKLLKELQN 388
A +A+++ +L+
Sbjct: 363 ANQALEIFNKLRG 375
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 85/159 (53%), Gaps = 5/159 (3%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLCAQ 303
+VN G PD+ +IKG+ ++ A R+ M ++ ++ P+ F+Y+ +I G C
Sbjct: 94 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRV---MEILESHTEPDVFAYNAVISGFCKV 150
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
R + A ++ + MK +GF+P +YN ++ +L ++ +K L +++ ITY
Sbjct: 151 NRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITY 210
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+++ G EAMKLL+E+ + L+ D YTY ++
Sbjct: 211 TILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 249
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P+ +Y+IL ++ G+ ++ + K M+ + PD +S + +I
Sbjct: 273 CEPNKVTYSILISSLCRFGR--------IDEAISVLKVMIEKELTPDTYSYDPLISALCK 324
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
++ A+ I M + LP+ +Y+ ++ LC G A E+ ++++ G P+
Sbjct: 325 EGRLDLAIGIMDYM-ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 381
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ A + A + M +C ++NIL F +N ++ V
Sbjct: 321 YNTVLKGLCSAERWEEAEDLLAEMFQE---DCPLDDVTFNILVDFFC---QNGLVDRVIE 374
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +QM+ G PD+ + ++I G+ V++A+ + M PN+ SY
Sbjct: 375 -----LLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSAC-GCKPNTISYTI 428
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC R +A+EL M ++G +P+ ++N+L++ + G VE+ ++ L +M+
Sbjct: 429 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG 488
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D I+Y TV+D + + G+ EA++LL + NK +
Sbjct: 489 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 524
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 126/304 (41%), Gaps = 35/304 (11%)
Query: 128 SKQPRF--RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
S+ P + + + Y+ + + L +A+ ++E +D++ +M + +N ++ FF +
Sbjct: 307 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPL-DDVTFNILVDFFCQ 365
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG-----------------KNT 228
+ R + + + M C P + +Y + F G K
Sbjct: 366 NGLVDRVIELLEQMLEHG---CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 422
Query: 229 YINHVYMETIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
I++ + C L M+ G P+ + N++I V A+ +
Sbjct: 423 TISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLK 482
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
QM +V P+ SY +I GL G+T+ A EL + M KG P++ Y+S+ SAL+
Sbjct: 483 QM-LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSRE 541
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTY 397
G ++ ++ + + D Y V+ +C+R A+ + N + + TY
Sbjct: 542 GRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 601
Query: 398 TKLL 401
T L+
Sbjct: 602 TILI 605
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 21/231 (9%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N ++ E + V + + + + C P I SYN + + + + +E
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPS---FGCEPDIVSYNAVLKGLCMAKRWDDVEELMVE 238
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN----HVNDALRIFHQMGVVYNYLPNSFS 292
MV G P++ + N++I Y+ N V++AL + G P+
Sbjct: 239 --------MVRVGCPPNVATFNTLI-AYLCRNGLFEQVHEALSQMPEHGCT----PDLRM 285
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y +I G+C G + A ++ M G P+ YN+++ L EE L EM
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLD 402
++ P+D +T+ ++D C+ G ++LL++ L++ + D TYT +++
Sbjct: 346 QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVIN 396
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G + + N+MI GY + V A R+ + V PN+++Y ++ LCA+G +
Sbjct: 71 GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVP----PNAYTYFPIVRSLCARGLIAD 126
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A + DEM +G + + ++ A G V+ L + K +D V+
Sbjct: 127 ALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVS 186
Query: 369 EICRRGRAGEAMKLLKELQN 388
IC +G E ++LL++L +
Sbjct: 187 AICEQGCVDEGVELLRKLPS 206
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
AL++ H G + S + + ++ +C QG EL ++ G P SYN+++
Sbjct: 165 ALQVLHAKGCTLD----SGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
L + ++ + + EM+ P + T+ T++ +CR G + + L ++
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT 280
Query: 393 -DGYTYTKLLDVLEDD 407
D Y ++D + D
Sbjct: 281 PDLRMYATIIDGICKD 296
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 144 TRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS- 202
TR L +A Y++ V+ +M+ F + Y+ ++ + A K+ A +F+ MK
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQ-GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 203 -------------------------------RNLECRPSIRSYNILFTAFLSRGKNTYIN 231
R + C P++ +Y L A+L K +Y N
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------GVVYN 285
LF+ M+++G P+I + +++I G+ + V A +IF +M V
Sbjct: 574 E--------LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 286 YL---------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
Y PN +Y L+ G C R + AR+L D M +G P+ Y++L+ L
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL-KELQNKNLIDGY 395
G+++E + EM E P TY +++D + R A K+L K L+N +
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 745
Query: 396 TYTKLLDVL 404
YT+++D L
Sbjct: 746 IYTEMIDGL 754
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 20/279 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY IM A + ++ N+M TP+ Y +I+ + +A+K+S A
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV----VTYTALIHAYLKAKKVSYA 572
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY--------METIRCLFKQ 244
+F+ M + C P+I +Y+ L G+ ++ + + FKQ
Sbjct: 573 NELFETMLSEG---CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
++ P++ + +++ G+ S+ V +A ++ M + PN YD LI GLC G
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM-EGCEPNQIVYDALIDGLCKVG 688
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ A+E+ EM GF + +Y+SL+ + K L +M+E + + Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
++D +C+ G+ EA KL++ ++ K + TYT ++D
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 55/260 (21%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNL-------------ECRPSIRSYNILFTAFL 222
Y+ +I +A ++ +A +F+ M S+++ RP++ +Y L F
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-- 280
+ +E R L M +G EP+ +++I G +++A + +M
Sbjct: 651 KSHR--------VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 281 ----GVVYNY----------------------------LPNSFSYDYLIHGLCAQGRTKN 308
+Y Y PN Y +I GLC G+T
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L M+ KG P+ +Y +++ + G++E ++ L M K +++TYR ++D
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 369 EICRRGRAGEAMKLLKELQN 388
C+ G A LL+E++
Sbjct: 823 HCCKNGALDVAHNLLEEMKQ 842
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 28/280 (10%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F D Y + L A +++E D +N+M AT Y+T++ ++L R
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV-VTYSTLLCGCLNKKQLGRC 356
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V M C PS + +N L A+ + G ++Y L K+MV G P
Sbjct: 357 KRVLNMMMMEG---CYPSPKIFNSLVHAYCTSGDHSYAYK--------LLKKMVKCGHMP 405
Query: 253 DIFSLNSMI------KGYILSNHVNDALRIFHQM---GVVYNYL-PNSFSYDYLIHGLCA 302
N +I K + + ++ A + + +M GVV N + +SF+ LC+
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT-----RCLCS 460
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
G+ + A + EM +GF+P + +Y+ +++ L ++E EM D T
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
Y ++D C+ G +A K E++ + TYT L+
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 134/333 (40%), Gaps = 23/333 (6%)
Query: 74 VGKRSKADSKPALDDTQFRCA---VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQ 130
+ R+ AD+ +DD R + + + + + + V+ L P + F WA +Q
Sbjct: 99 IDARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQ 158
Query: 131 PRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLS 190
++H A Y+ + + + ++ + Q+ E L N ++ S
Sbjct: 159 IGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFL-NVLVRKHCRNGSFS 217
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A+ +K+ R RPS +YN L AFL + +++ + ++M +
Sbjct: 218 IALEELGRLKDFRF---RPSRSTYNCLIQAFLKADR--------LDSASLIHREMSLANL 266
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
D F+L +AL + N++P++ Y LI GLC + A
Sbjct: 267 RMDGFTLRCFAYSLCKVGKWREALTLVE----TENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE--MIEKQRPVDFITYRTVLD 368
+ + M+ +P+ +Y++L+ LN + K + M+E P I + +++
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVLNMMMMEGCYPSPKI-FNSLVH 380
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
C G A KLLK++ + GY +L
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 111/286 (38%), Gaps = 59/286 (20%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII--YFFAEARKLSRAVYVFKYMKNSR 203
K+G QE V ++ F T Y+++I YF + + L+ V + K ++NS
Sbjct: 686 KVGKLDEAQE----VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV-LSKMLENS- 739
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
C P++ Y + GK + Y L + M G +P++ + +MI G
Sbjct: 740 ---CAPNVVIYTEMIDGLCKVGKT---DEAYK-----LMQMMEEKGCQPNVVTYTAMIDG 788
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ + + L + +MG PN +Y LI C G A L +EMK+ +
Sbjct: 789 FGMIGKIETCLELLERMGS-KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWE-------------------MIEKQRP------- 357
+ Y ++ N E E++ L E +I+ QR
Sbjct: 848 HTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLL 905
Query: 358 ----------VDFI-TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
VD+ TY ++++ +C + A +L E+ K +I
Sbjct: 906 EEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN- 289
N ++E++ L ++ D P + +I I + + ALR+ ++ L +
Sbjct: 860 NKEFIESLG-LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
S +Y+ LI LC + + A +L EM +KG +P +S+ SL+ L N ++ E +
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 34/273 (12%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F+H +Y I+ L A+MY + + V+ +M+ + + C
Sbjct: 6 FKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCD--------------------- 44
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
VF + ++RN+ C P ++ LF+ + G + E I+C F +M + P
Sbjct: 45 --VFDVLWSTRNV-CVPGFGVFDALFSVLIDLG-------MLEEAIQC-FSKMKRFRVFP 93
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
S N ++ + +D R F M + P F+Y+ +I +C +G + AR L
Sbjct: 94 KTRSCNGLLHRFAKLGKTDDVKRFFKDM-IGAGARPTVFTYNIMIDCMCKEGDVEAARGL 152
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+EMK +G VP + +YNS++ G +++TV EM + D ITY +++ C+
Sbjct: 153 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 212
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
G+ ++ +E++ L + +Y+ L+D
Sbjct: 213 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 245
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 120/312 (38%), Gaps = 46/312 (14%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL--YNTIIYFFAEARKLSRAV 193
D TY+ M G +DD V C + YN +I F + KL +
Sbjct: 164 DTVTYNSMIDGFGKVG---RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 220
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC------------- 240
++ MK + +P++ SY+ L AF G Y++ R
Sbjct: 221 EFYREMKGNG---LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 277
Query: 241 --------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
L +M+ G+E ++ + ++I G + + +A +F +M
Sbjct: 278 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA-GV 336
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+PN SY+ LIHG A EL +E+K +G P Y + + L ++E
Sbjct: 337 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 396
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYT 396
+ EM E + + Y T++D + G E + LL E++ + LIDG
Sbjct: 397 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 456
Query: 397 YTKLLDVLEDDF 408
KL+ D F
Sbjct: 457 KNKLVSKAVDYF 468
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
M+ LF +M G+ P++ S N++I G++ + +++ AL + +++ P+ Y
Sbjct: 321 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG-RGIKPDLLLYG 379
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
I GLC+ + + A+ + +EMK G +S Y +L+ A +G E + L EM E
Sbjct: 380 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 439
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
V +T+ ++D +C+ +A+ + N
Sbjct: 440 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 473
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 15/219 (6%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS--YNILFTAFLSRGKNTYINH 232
LY T I+ K+ A V MK EC S Y L A+ G T H
Sbjct: 377 LYGTFIWGLCSLEKIEAAKVVMNEMK-----ECGIKANSLIYTTLMDAYFKSGNPTEGLH 431
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
L +M IE + + +I G + V+ A+ F+++ + N+
Sbjct: 432 --------LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 483
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ +I GLC + + A L ++M +KG VP +Y SL+ G V E + +M
Sbjct: 484 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 543
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
E +D + Y +++ + + +A L+E+ + +
Sbjct: 544 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 582
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 116/274 (42%), Gaps = 26/274 (9%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRAVYVFKYMKNS 202
K+ AAK+ V+N+M CG +A +Y T++ + ++ + +++ MK
Sbjct: 390 KIEAAKV------VMNEMKE----CGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE- 438
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND-GIEPDIFSLNSMI 261
L+ ++ ++ +L KN ++ F ++ ND G++ + +MI
Sbjct: 439 --LDIEVTVVTFCVLIDGLC---KNKLVSKAVD-----YFNRISNDFGLQANAAIFTAMI 488
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
G N V A +F QM V +P+ +Y L+ G QG A L D+M G
Sbjct: 489 DGLCKDNQVEAATTLFEQM-VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 547
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+Y SLV L+ ++++ L EMI + D + +VL + G EA++
Sbjct: 548 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 607
Query: 382 LLKELQNKNLIDGYTYTKLLDVLEDDFGNSIRHH 415
L L L+ L ++ D S R H
Sbjct: 608 LQSYLMKHQLLTSDNDNALPNIYSDQNLVSSREH 641
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 14/270 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F + TY I+ M+ + ++ +M A ++ YN +IY + ++ A
Sbjct: 377 FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG-YNGMIYALCKDGRMDEA 435
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + + M R+ C P I SYN + N+ ME +F+ ++ +G+
Sbjct: 436 MGLIQEM---RSQGCNPDICSYNTIIYHL--------CNNEQMEEAEHMFENLLEEGVVA 484
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + N++I + DA+R+ +M +++ + SY+ LI +C G + L
Sbjct: 485 NGITYNTIIHALLRDGRWQDAVRLAKEM-ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+EM KG P++ SYN L+S L V + ++ +M+ + D +TY T+++ +C+
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
G A+ LL++L N+N+ D TY L+
Sbjct: 604 MGWMHAALNLLEKLHNENVHPDIITYNILI 633
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 17/255 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA Y + L E ++N+ML G A NT L R
Sbjct: 209 DAVLYQTVIHALCDQGGVTEAATLLNEML----LMGCAADVNTFDDVVRGMCGLGRVREA 264
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ + C P + +Y L L R + + R + ++ E ++
Sbjct: 265 ARLVDRMMTKGCMPGVMTYGFLLQG-LCRVRQA-------DEARAMLGRVP----ELNVV 312
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
N++I G + + +A ++ MG+ P++ +Y L+HGLC GR +A L E
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGL-KGCQPDAHTYSILMHGLCKLGRIGSAVRLLRE 371
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M++KGF P+ +Y ++ + NG ++T L EM K ++ Y ++ +C+ GR
Sbjct: 372 MEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR 431
Query: 376 AGEAMKLLKELQNKN 390
EAM L++E++++
Sbjct: 432 MDEAMGLIQEMRSQG 446
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
P C YNTIIY ++ A ++F+ + + + +YN + A L G+
Sbjct: 449 PDICS----YNTIIYHLCNNEQMEEAEHMFENLLEEGVVA---NGITYNTIIHALLRDGR 501
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
+ + +R L K+M+ G D+ S N +IK +V+ +L + +M
Sbjct: 502 -------WQDAVR-LAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM-AEKGI 552
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
PN+ SY+ LI LC + R ++A EL +M +G P +YN+L++ L G + +
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 612
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICR 372
L ++ + D ITY ++ C+
Sbjct: 613 LLEKLHNENVHPDIITYNILISWHCK 638
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 113/296 (38%), Gaps = 53/296 (17%)
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEAR-- 187
QP FR +Y+++ L A + + + +M+ + + T F AR
Sbjct: 136 QPSFR----SYNVVLSVLARADCHADALALYRRMVHR------DRVPPTTFTFGVAARAL 185
Query: 188 -KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
+L RA ++ C P Y + A +G T L +M+
Sbjct: 186 CRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT--------EAATLLNEML 237
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC----- 301
G D+ + + +++G V +A R+ +M + +P +Y +L+ GLC
Sbjct: 238 LMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM-MTKGCMPGVMTYGFLLQGLCRVRQA 296
Query: 302 --------------------------AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
A+G+ A EL + M KG P + +Y+ L+ L
Sbjct: 297 DEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
G + V+ L EM +K + +TY VL C+ G + LL+E+ K L
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 412
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 12/204 (5%)
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN-D 248
RA+++ + R +PS RSYN++ + L+R + + + L+++MV+ D
Sbjct: 120 GRALHLLDQLP--RRFGVQPSFRSYNVVLS-VLARAD------CHADAL-ALYRRMVHRD 169
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
+ P F+ + ++AL + M + +P++ Y +IH LC QG
Sbjct: 170 RVPPTTFTFGVAARALCRLGRADEALALLRGM-ARHGCVPDAVLYQTVIHALCDQGGVTE 228
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L +EM G +++ +V + G V E + + M+ K +TY +L
Sbjct: 229 AATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQ 288
Query: 369 EICRRGRAGEAMKLLKELQNKNLI 392
+CR +A EA +L + N++
Sbjct: 289 GLCRVRQADEARAMLGRVPELNVV 312
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G++P S N ++ ++ DAL ++ +M P +F++ LC GR
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L M R G VP + Y +++ AL G V E L EM+ D T+ V+
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
+C GR EA +L+ + K + G TY LL L
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 290
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 19/231 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y I + EA + + A KY+K R P+ +L T + N Y +
Sbjct: 525 YGAFISGYIEASEFASAD---KYVKEMRECGVLPN----KVLCTGLI----NEYCKKEKV 573
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
++ MV+ GI D + ++ G ++ V+DA IF +M G+ P+ FS
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA----PDVFS 629
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+G G + A + DEM +G P+ YN L+ +GE+E+ + L EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
K + +TY T++D C+ G EA +L E++ K L+ D + YT L+D
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F++M GI PD+FS +I G+ ++ A IF +M V PN Y+ L+ G
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM-VEEGLTPNVIIYNMLLGGF 672
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G + A+EL DEM KG P++ +Y +++ +G++ E + EM K D
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 361 ITYRTVLDEICR 372
Y T++D CR
Sbjct: 733 FVYTTLVDGCCR 744
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 109/272 (40%), Gaps = 53/272 (19%)
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
G Y ++ + K+ A +F+ M R P + SY +L F G
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREM---RGKGIAPDVFSYGVLINGFSKLGN---- 642
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
M+ +F +MV +G+ P++ N ++ G+ S + A + +M V PN+
Sbjct: 643 ----MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNA 697
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL-- 348
+Y +I G C G A L DEMK KG VP S Y +LV +VE +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 349 -----------------W-----------EMIEK---------QRPVDFITYRTVLDEIC 371
W E++ + +P D +TY ++D +C
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND-VTYNIMIDYLC 816
Query: 372 RRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
+ G A +L ++QN NL+ TYT LL+
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ + L A + K M S CRP++ Y L FL N +
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASG---CRPNVVIYTTLIKTFLQ-------NSRFG 469
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
+ +R L K+M GI PDIF NS+I G + +++A +M V N L PN+F+Y
Sbjct: 470 DAMRVL-KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM--VENGLKPNAFTYG 526
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
I G +A + EM+ G +P+ L++ +V E M+++
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQ 586
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D TY +++ + + + +A ++ +E++ K + D ++Y L++
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+Y++L L +G+N + + L +MV+ GI + + I +
Sbjct: 314 TYSLLIDGLL-KGRNA-------DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A +F M + +P + +Y LI G C + + EL EMK++ V S +Y ++V
Sbjct: 366 AKALFDGM-IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ +G+++ + EMI + + Y T++ + R G+AM++LKE++ + +
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 393 -DGYTYTKLL 401
D + Y L+
Sbjct: 485 PDIFCYNSLI 494
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME + LF M+ G+ P + S+I+GY +V + +M N + + ++Y
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYG 421
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ G+C+ G A + EM G P+ Y +L+ N + ++ L EM E+
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D Y +++ + + R EA L E+ L + +TY +
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 118/326 (36%), Gaps = 76/326 (23%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQM----LATPSFCGTEALYNTIIYFFAEARKLSR 191
DA TY ++ L + +++ +M +A F Y +I F++ + +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS-----YGVLINGFSKLGNMQK 645
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG--------------KNTYINHVYMET 237
A +F M P++ YN+L F G K + N V T
Sbjct: 646 ASSIFDEMVEEG---LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 238 I---RC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ----- 279
I C LF +M G+ PD F +++ G N V A+ IF
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 280 ------MGVVYNYL--------------------------PNSFSYDYLIHGLCAQGRTK 307
+ N++ PN +Y+ +I LC +G +
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A+EL +M+ +P+ +Y SL++ G E E I D I Y ++
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 368 DEICRRGRAGEAMKLLKELQNKNLID 393
+ + G +A+ L+ ++ KN +D
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVD 908
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 15/206 (7%)
Query: 172 TEALYNTII-YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
+ A +N +I + F + + + + M S + +P+ +YNI+ G
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN---- 820
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
+E + LF QM N + P + + S++ GY + +F + + P+
Sbjct: 821 ----LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-AIAAGIEPDH 875
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP-----SSKSYNSLVSALALNGEVEETV 345
Y +I+ +G T A L D+M K V S + +L+S A GE+E
Sbjct: 876 IMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAE 935
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEIC 371
K + M+ Q D T +++E C
Sbjct: 936 KVMENMVRLQYIPDSATVIELINESC 961
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 152/417 (36%), Gaps = 93/417 (22%)
Query: 66 LSRSSSRGVGKRSKADSKPA--LDDTQFRCAV--SELPPRFNNEELCNVMTLQ--EDPLV 119
L RS S V K S A ++ A L +R + S L N E + +V+ + +DP
Sbjct: 20 LFRSFSVNVEKLSDASAEIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSK 79
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--------------- 164
L FNW Q ++ + L +++ VV +M+
Sbjct: 80 LLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVR 139
Query: 165 ATPSFCGTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+ F G L+ + + + AV+VF +S LE P + +L A
Sbjct: 140 CSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFS---SSMGLELVPRLSRCKVLLDAL 196
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV----------- 270
L + VY K MV + D+ + + +I + + +V
Sbjct: 197 LRWNRLDLFWDVY--------KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTE 248
Query: 271 ----------NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+ AL++ M + +P ++YD LI GLC R ++A+ L EM G
Sbjct: 249 KEFRTATLNVDGALKLKESM-ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307
Query: 321 FVPSSKSYNSLVSAL-------ALNGEVEETV---------------------------K 346
+ +Y+ L+ L A G V E V K
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
Query: 347 NLWE-MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
L++ MI Y ++++ CR + +LL E++ +N+ I YTY ++
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
>gi|15231886|ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g14580, mitochondrial; Flags: Precursor
gi|9294380|dbj|BAB02390.1| unnamed protein product [Arabidopsis thaliana]
gi|119935972|gb|ABM06049.1| At3g14580 [Arabidopsis thaliana]
gi|332642020|gb|AEE75541.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 13/282 (4%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM-L 164
E+ + +DP L + SK+ ++ S Y +M K G AKMY E+++V+ + L
Sbjct: 64 EVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKL 123
Query: 165 ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR 224
E YN + + A +++RA+ + M + C PS +S+N +
Sbjct: 124 EKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPD---FGCWPSSKSFNFIL------ 174
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
N ++ + I +F G+E D LN +IKG S ++ AL++ +
Sbjct: 175 --NLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQK 232
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
+ PN ++ LI G C +G+ + A +L + M+++ P + ++N L+S L G VEE
Sbjct: 233 SR-PNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEG 291
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ L M K + TY+ VL + + R EA +++ ++
Sbjct: 292 IDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQM 333
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 34/314 (10%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA+K+ + HD STY + L + Y EM ++ +M+ P T +
Sbjct: 72 VKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSD 131
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME-- 236
++ A+ + +A+ +F +K + C+P ++YN + + G+ ++ +Y E
Sbjct: 132 VVRMLGNAKMVRQAITIFYQIKTRK---CQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMS 188
Query: 237 ----------------TIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ C L +M G++P +I + N
Sbjct: 189 TEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDA 248
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ AL +F +M Y P+ F+Y LI GL GR A EM+R+G P + N+
Sbjct: 249 HGALSLFEEMRHQYCR-PDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNN 307
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR-RGRAGEAMKLLKELQNK 389
+++ L G +++ +K EM + +TY T++ + + RA E + ++
Sbjct: 308 MINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 367
Query: 390 NL-IDGYTYTKLLD 402
+ +TY+ L+D
Sbjct: 368 GISPSSFTYSILID 381
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 128/308 (41%), Gaps = 50/308 (16%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY-NTIIYFFAEARKLSRA 192
R D TY + R LG A E +M C + ++ N +I F +A +L A
Sbjct: 264 RPDVFTYTELIRGLGKAGRIDEAYHFFCEM--QREGCRPDTVFMNNMINFLGKAGRLDDA 321
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTA-FLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
+ +F+ M+ L C PS+ +YN + A F S+ + + + F++M GI
Sbjct: 322 MKLFQEMET---LRCIPSVVTYNTIIKALFESKSRAS--------EVPSWFERMKESGIS 370
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS----------- 292
P F+ + +I G+ +N + A+ + +M Y L ++
Sbjct: 371 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 430
Query: 293 ---------------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
Y +I L GR +A + DEM + G P +YN+L+S LA
Sbjct: 431 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 490
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYT 396
G ++E + + M E D +Y +L+ + + G AM++L ++ + D +
Sbjct: 491 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 550
Query: 397 YTKLLDVL 404
Y +L L
Sbjct: 551 YNTVLGAL 558
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 116/292 (39%), Gaps = 55/292 (18%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K++QEM+ + PS YNTII E++ SRA V + + +
Sbjct: 321 AMKLFQEME----TLRCIPSV----VTYNTIIKALFESK--SRASEVPSWFERMKESGIS 370
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP---------------- 252
PS +Y+IL F + ME L ++M G P
Sbjct: 371 PSSFTYSILIDGFCKTNR--------MEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 422
Query: 253 ------DIFS-------------LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
++F MIK + ++DA+ +F +M + P+ ++Y
Sbjct: 423 RYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKL-GCAPDVYAY 481
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L+ GL G A M+ G +P SYN +++ LA G ++ L M +
Sbjct: 482 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 541
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D ++Y TVL + G EA KL+KE+ D TY+ +L+ +
Sbjct: 542 STVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI 593
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 119/220 (54%), Gaps = 17/220 (7%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K A+ +F+ M +SR L P++ ++ LF+A +++ K + + L KQM
Sbjct: 68 KADDAIDLFRDMIHSRPL---PTVIDFSRLFSA-IAKTKQ-------YDLVLALCKQMEL 116
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV--YNYLPNSFSYDYLIHGLCAQGR 305
GI ++++L+ MI + + A F MG + Y PN+ ++ LI+GLC +GR
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLA---FSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A EL D M G P + N+LV+ L L+G+ E + + +M+E + +TY
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
VL+ +C+ G+ AM+LL++++ +N+ +D Y+ ++D L
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F A + + + M + P++ ++++L +F+ GK +
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRK---INPNVVTFSVLIDSFVKEGK--------L 349
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L K+M++ GI PD + S+I G+ NH++ A ++ M V PN +++
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM-VSKGCDPNIRTFNI 408
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C R + EL +M +G V + +YN+L+ G++ + EM+ ++
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
P + +TY+ +LD +C G + +A+++ ++++ +
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 48/262 (18%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
+ +I F RKL A F M L P+ +++ L G+ + E
Sbjct: 127 SIMINCFCRCRKLCLA---FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS-------E 176
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY--- 293
+ L +MV G +PD+ ++N+++ G LS +A+ + +M V Y PN+ +Y
Sbjct: 177 ALE-LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM-VEYGCQPNAVTYGPV 234
Query: 294 --------------------------------DYLIHGLCAQGRTKNARELCDEMKRKGF 321
+I GLC G NA L +EM+ KG
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+ +YN L+ G ++ K L +MI+++ + +T+ ++D + G+ EA +
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 382 LLKELQNKNLI-DGYTYTKLLD 402
L KE+ ++ + D TYT L+D
Sbjct: 355 LHKEMIHRGIAPDTITYTSLID 376
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 13/232 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + +A ++ + +F+ M + R + +YN L F GK +
Sbjct: 406 FNILINGYCKANRIDDGLELFRKM-SLRGV--VADTVTYNTLIQGFCELGK--------L 454
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF++MV+ + P+I + ++ G + AL IF ++ L Y+
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI-YNI 513
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+IHG+C + +A +L + KG P K+YN ++ L G + E +M E
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
D TY ++ G A +++KL++EL+ +D T ++D+L D
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ II + L A +F M+ +I +YNIL F + G+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMK---GITTNIITYNILIGGFCNAGR--------W 314
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L + M+ I P++ + + +I ++ + +A + +M + P++ +Y
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM-IHRGIAPDTITYTS 373
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C + A ++ D M KG P+ +++N L++ +++ ++ +M +
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVLEDD 407
D +TY T++ C G+ A +L +E+ ++ + TY LLD L D+
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 117/232 (50%), Gaps = 9/232 (3%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
++AL++ + + A K A+ VF+ M L+ +P++ + N L + Y +
Sbjct: 130 SKALFDIALSAYLHAGKPHVALQVFQKM---IRLKLKPNLLTCNTLLIGLVR-----YPS 181
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ + R +F MV G+ D+ + N ++ GY L + DAL + +M +N P++
Sbjct: 182 SFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNV 241
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ ++ + +GR + ++L +MKR G VP+ +YN+LV G ++E + + M
Sbjct: 242 TYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+ D TY +++ +C G E ++L+ +++ L D TY L+D
Sbjct: 302 KQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLID 353
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 108/217 (49%), Gaps = 13/217 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y T+I + K+ +A ++ MK ++ P++ ++N L GK
Sbjct: 486 EVTYGTLIMGYFREEKVEKAFEMWDEMKR---IKITPTVTTFNSLIGGLCHHGKT----E 538
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ ME F ++ G+ PD + NS+I GY V A F+ + +++ P++++
Sbjct: 539 LAMEK----FDELAESGLLPDDCTFNSIILGYCKEGRVEKAFE-FYNESIKHSFKPDNYT 593
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ L++GLC +G T+ A + + + V + +YN+++SA + +++E L EM
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
EK+ D TY +++ + G+ EA +LLK+ K
Sbjct: 653 EKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGK 689
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 125/304 (41%), Gaps = 47/304 (15%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T++I + L + +E+ V +++ F Y+T+I + + LS A+ + +
Sbjct: 382 THNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + + + N + A K ++ L G D +
Sbjct: 442 MGQKG---IKMNTITLNTILDALCKERK--------VDEAHNLLDSAHKRGYIVDEVTYG 490
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I GY V A ++ +M + P +++ LI GLC G+T+ A E DE+
Sbjct: 491 TLIMGYFREEKVEKAFEMWDEMKRI-KITPTVTTFNSLIGGLCHHGKTELAMEKFDELAE 549
Query: 319 KGFVPSSKSYNSLVSALALNGEVE-------ETVKNLWE-----------------MIEK 354
G +P ++NS++ G VE E++K+ ++ M EK
Sbjct: 550 SGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK 609
Query: 355 ----------QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDV 403
+R VD +TY T++ C+ + EA LL E++ K L D +TY ++
Sbjct: 610 ALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITS 669
Query: 404 LEDD 407
L +D
Sbjct: 670 LMED 673
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 129/330 (39%), Gaps = 86/330 (26%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
KLG+ K ++ +++ Q P C YN +I A + + + MK+ L
Sbjct: 287 KLGSLKEAFQIVELMKQTNILPDLCT----YNILINGVCNAGSIREGLELMDVMKS---L 339
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE-------------- 251
+ +P + +YN L G + +E + L +QM NDG++
Sbjct: 340 KLQPDVVTYNTLIDGCFELG-------LSLEAKK-LMEQMENDGVKPNQVTHNISLKWLC 391
Query: 252 ----------------------PDIFSLNSMIKGYILSNHVNDALRIFHQMG-------- 281
PDI + +++IK Y+ ++ AL + +MG
Sbjct: 392 KEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNT 451
Query: 282 VVYN--------------------------YLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N Y+ + +Y LI G + + + A E+ DE
Sbjct: 452 ITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDE 511
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
MKR P+ ++NSL+ L +G+ E ++ E+ E D T+ +++ C+ GR
Sbjct: 512 MKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGR 571
Query: 376 AGEAMKLLKE-LQNKNLIDGYTYTKLLDVL 404
+A + E +++ D YT LL+ L
Sbjct: 572 VEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 17/232 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I F + +L A +F+ M + C P I +YNI+ + + +
Sbjct: 379 FNLMIDMFCKVGQLDLAYELFQLMTDRG---CLPDIYTYNIMISGACRANR--------I 427
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN--YLPNSFSY 293
+ R L ++M G PD+ + NS++ G ++ V++A ++ V+ N Y + +
Sbjct: 428 DDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYE---VLRNGGYFLDVVTC 484
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI GLC R +A +L EM+R G P +Y L+ ++++++ EM++
Sbjct: 485 STLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLD 544
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
K ITY V+D++C+ R + LLK + + + D YT ++D L
Sbjct: 545 KGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGL 596
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 125/269 (46%), Gaps = 18/269 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
TY I+ L + + ++ M+ + C + YNT+I F + + AV +F
Sbjct: 238 TYTILVDALCKSARISDASLILEDMIE--AGCAPNVVTYNTLINGFCKLGNMDEAVVLFN 295
Query: 198 YM-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M +NS C P + +YNIL + + + + L ++MV G EP+ +
Sbjct: 296 QMLENS----CSPDVFTYNILIDGYCKQERP--------QDGAKLLQEMVKYGCEPNFIT 343
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N+++ + S DA + QM + + P+ F+++ +I C G+ A EL M
Sbjct: 344 YNTLMDSLVKSGKYIDAFNL-AQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 402
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
+G +P +YN ++S +++ + L M E P D +TY +++ +C+ +
Sbjct: 403 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 462
Query: 377 GEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
EA ++ + L+N +D T + L+D L
Sbjct: 463 DEAYEVYEVLRNGGYFLDVVTCSTLIDGL 491
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 20/262 (7%)
Query: 150 AKMYQEMDDV------VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSR 203
++ Q++DD+ + P + ++ N ++ F +K A +FK N R
Sbjct: 103 GRVLQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFK---NHR 159
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
C P +Y+ L F K Y L +M GI P N++IKG
Sbjct: 160 CGLCSPDSITYSTLINGFC---KARDFQQAYR-----LLDEMEKRGIVPHNAVYNTIIKG 211
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ V+ AL H + N P+ +Y L+ LC R +A + ++M G P
Sbjct: 212 LCDNGRVDSAL--VHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAP 269
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ +YN+L++ G ++E V +M+E D TY ++D C++ R + KLL
Sbjct: 270 NVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLL 329
Query: 384 KELQNKNLIDGY-TYTKLLDVL 404
+E+ + TY L+D L
Sbjct: 330 QEMVKYGCEPNFITYNTLMDSL 351
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 122/287 (42%), Gaps = 19/287 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTI 179
++ F+W + QP ++H T + + K QE D+ C +++ Y+T+
Sbjct: 116 VKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRC--GLCSPDSITYSTL 173
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVYMETI 238
I F +AR +A + M+ + P YN + G+ ++ + H
Sbjct: 174 INGFCKARDFQQAYRLLDEMEKRGIV---PHNAVYNTIIKGLCDNGRVDSALVH------ 224
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
++ M + P + + ++ S ++DA I M + PN +Y+ LI+
Sbjct: 225 ---YRDMQRN-CAPSVITYTILVDALCKSARISDASLILEDM-IEAGCAPNVVTYNTLIN 279
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G C G A L ++M P +YN L+ ++ K L EM++
Sbjct: 280 GFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEP 339
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+FITY T++D + + G+ +A L + + ++ +T+ ++D+
Sbjct: 340 NFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 386
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 96/215 (44%), Gaps = 14/215 (6%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
+T+I ++R+L A + + M+ + + P + +Y IL F + ++
Sbjct: 485 STLIDGLCKSRRLDDAEKLLREMERNGS---APDVVAYTILIHGFCKADQ--------LD 533
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
F +M++ G P + + + +I S V D + M + P++ Y +
Sbjct: 534 KSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM-LERGVTPDAIVYTSV 592
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GLC A EL MK+ G P+ +YN LV L ++E + +L E++E
Sbjct: 593 IDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI-HLLEVMESDG 651
Query: 357 PV-DFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+ D +TY +V D + +A +L + ++++
Sbjct: 652 CLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRG 686
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 137/333 (41%), Gaps = 67/333 (20%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F+ D +Y + + L A+K + +++++ +M+ E ++ +I FF + RA
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCM-PNEVTFDMLIRFFCRGGMVERA 302
Query: 193 VYV--------------------------------FKYMKNSRNLECRPSIRSYNILFTA 220
+ V FK + + + C P SY +
Sbjct: 303 IQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKG 362
Query: 221 FLSRGK---------------NTYINHVYMETIRC-------------LFKQMVNDGIEP 252
L R + N N V T C L +QM G
Sbjct: 363 -LCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTV 421
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + N+++ G+ + H++ AL +F M PN+ +Y L+ GLC R A EL
Sbjct: 422 GVVTYNALVNGFCVQGHIDSALELFRSMPCK----PNTITYTTLLTGLCNAERLDGAAEL 477
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM R P+ ++N LVS G +EE ++ + +M+E + ITY T+LD I +
Sbjct: 478 VAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITK 537
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +A++LL L +K + D T++ ++ +L
Sbjct: 538 DCSSEDALELLHGLVSKGVSPDVITFSSIIGIL 570
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 5/157 (3%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G D+F+ N+++ GY H++ A R+ M V P++++Y LI LC +GR +
Sbjct: 106 GSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA----PDAYTYTPLIRVLCDRGRVAD 161
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L D+M R+G P+ +Y L+ A+ N E+ + L EM K + +TY +++
Sbjct: 162 ALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIIN 221
Query: 369 EICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+CR GR +A +LL L + D +YT LL L
Sbjct: 222 GMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGL 258
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I + +++ A+ + M C+P++ +Y +L A
Sbjct: 146 YTPLIRVLCDRGRVADALSLLDDMLRRG---CQPNVVTYTVLLEAMCRNSG--------F 194
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +M G P+I + N +I G V+DA + +++ Y + P++ SY
Sbjct: 195 EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPS-YGFQPDTVSYTT 253
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLCA R + EL EM K +P+ +++ L+ G VE ++ L +M E
Sbjct: 254 LLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHG 313
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ V++ IC++GR +A KLL ++ + D +YT +L L
Sbjct: 314 CATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGL 363
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 125/270 (46%), Gaps = 23/270 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D +Y + + L A+ + + +++N+M+ P+ E +NT I + + +A
Sbjct: 352 DTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPN----EVTFNTFICILCQKGLIEQA 407
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + + M C + +YN L F +G ++++ LF+ M +P
Sbjct: 408 IMLIEQMSEHG---CTVGVVTYNALVNGFCVQG--------HIDSALELFRSM---PCKP 453
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + +++ G + ++ A + +M + + PN +++ L+ C +G + A EL
Sbjct: 454 NTITYTTLLTGLCNAERLDGAAELVAEM-LRGDCPPNVVTFNVLVSFFCQKGFLEEAIEL 512
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++M G P+ +YN+L+ + + E+ ++ L ++ K D IT+ +++ + +
Sbjct: 513 VEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSK 572
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
R EA++L +Q+ + Y K+L
Sbjct: 573 EDRIEEAVQLFHVVQDIGMRPKAVVYNKIL 602
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A+R+ + G P+ + LI LC +GRT +A + + G +YN+LV
Sbjct: 59 AVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLV 118
Query: 333 SALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+ G ++ + + M PV D TY ++ +C RGR +A+ LL ++ +
Sbjct: 119 AGYCRYGHLDAARRLIGSM-----PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG 173
Query: 391 L-IDGYTYTKLLDVL 404
+ TYT LL+ +
Sbjct: 174 CQPNVVTYTVLLEAM 188
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 13/270 (4%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + D++ ++L+ Y +II + + K+ +A +
Sbjct: 271 DVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASIL 330
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M +S +P+ ++NIL F G M + ++++M+ G PDI
Sbjct: 331 FNNMISS---GIKPNAFTFNILINGFGKVGD--------MVSAENMYEEMLLLGCPPDII 379
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ S+I G+ + V +L+++H++ N PN +++ L + LC + R AR +
Sbjct: 380 TFTSLIDGHCRTGKVERSLKLWHELNA-RNLSPNEYTFAILTNALCKENRLHEARGFLRD 438
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
+K + V YN ++ G V+E L EM EK+ D ITY ++ C +GR
Sbjct: 439 LKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGR 498
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
EA+ + + D T T L+ L
Sbjct: 499 LSEAISIFNRMLGTGCAPDSITMTSLISCL 528
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 9/193 (4%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
S+NIL GK ++ + LF +M G PD+ + N++I G+ N V+
Sbjct: 239 SFNILIRGLCRIGK---VDKAFE-----LFNEMRGFGCSPDVITYNTLINGFCRVNEVDR 290
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
+ ++ + P+ +Y +I G C G+ + A L + M G P++ ++N L+
Sbjct: 291 GHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILI 350
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL- 391
+ G++ EM+ P D IT+ +++D CR G+ ++KL EL +NL
Sbjct: 351 NGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLS 410
Query: 392 IDGYTYTKLLDVL 404
+ YT+ L + L
Sbjct: 411 PNEYTFAILTNAL 423
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 135 HDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
H + + I++R L +KM+ E+DD+ +L +PS +++ ++ A++ ++A+
Sbjct: 37 HRSQSIPIISRILIRSKMFNELDDLHQLLLNSPSLESSDSSLENLVTVLAKSGFFNKAIS 96
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
FK ++ S E +PSI YN+L + + + +E + L+K MV + P+
Sbjct: 97 HFKSLR-SNFPEKQPSIYLYNVLLKSCIRENR--------VELVSWLYKDMVLARVSPEA 147
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
++ N +I S H+ DA +F +M PN F++ L+ G C G EL
Sbjct: 148 YTFNLLIGLLCDSGHLEDARELFDKM-PARGCEPNEFTFGILVRGYCRAGLASKGLELLG 206
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M+ G +P++ YN+L+S+ G+ + K + +M E T+ + + +C G
Sbjct: 207 QMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSG 266
Query: 375 RAGEAMKLLKELQ 387
+ EA ++ +++Q
Sbjct: 267 KILEASRIFRDMQ 279
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 132 RFRHDASTYHIMT------------RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI 179
+ R D H+ T + L A++++++M +++ L P Y +
Sbjct: 242 KMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQ--IDEELGLPH--PNVITYKLM 297
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ F + L A + MK + N ++ SYNI + GK +
Sbjct: 298 LMGFCKEGMLEEAKTLVDTMKRNANF---INLESYNIWLLGLIRNGK--------LLEAW 346
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+ K+M+ GIEPDI+S N ++ G + ++DA R+ + + LP++ +Y L+HG
Sbjct: 347 IVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDA-RMLMGLMIRNGILPDTVTYSTLLHG 405
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
C++G+ A L EM P++ + N L+ +L G + E L +M EK VD
Sbjct: 406 YCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVD 465
Query: 360 FITYRTVLDEICRRGRAGEAMKLL 383
+T +++ +C G+ +A++++
Sbjct: 466 TVTCNIIINALCNNGQLDKAIEIV 489
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 25/291 (8%)
Query: 121 LELFNWASKQ---PRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEA 174
+EL +W K R +A T++++ L + ++ ++ ++M A P+ E
Sbjct: 128 VELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPN----EF 183
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+ ++ + A S+ + + M R + P+ YN L ++F GK
Sbjct: 184 TFGILVRGYCRAGLASKGLELLGQM---RTMGILPNNVLYNTLISSFCKEGKT------- 233
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL---PNSF 291
L +M DG+ P + + NS I S + +A RIF M + PN
Sbjct: 234 -HDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVI 292
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y ++ G C +G + A+ L D MKR + +SYN + L NG++ E L EM
Sbjct: 293 TYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEM 352
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK-ELQNKNLIDGYTYTKLL 401
+ D +Y V+D +C+ G +A L+ ++N L D TY+ LL
Sbjct: 353 LGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLL 403
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 242 FKQMVNDGIE-----PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
F +V+D I PD+ + +++I G + ++DA + F +M + P+S YD
Sbjct: 507 FIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEM-MSKGLQPDSAIYDTF 565
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
IH C +G+ +A ++ +M+++G + ++YNSL+ L ++ E + EM EK
Sbjct: 566 IHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGV 625
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D TY +L+ +C GR +A +L E+ K +
Sbjct: 626 SPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGI 660
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 115/310 (37%), Gaps = 71/310 (22%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY +M M +E +V+ M +F E+ YN + KL A V K
Sbjct: 293 TYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLES-YNIWLLGLIRNGKLLEAWIVLKE 351
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + P I SYNI+ G + R L M+ +GI PD + +
Sbjct: 352 M---LGIGIEPDIYSYNIVMDGLCKNG--------MLSDARMLMGLMIRNGILPDTVTYS 400
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH-------------------- 298
+++ GY V +A + H+M + N PN+++ + L+H
Sbjct: 401 TLLHGYCSKGKVFEANNLLHEM-ISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNE 459
Query: 299 ---------------GLCAQGRTKNARELCDEMKRKG----------FV----------- 322
LC G+ A E+ + M G F+
Sbjct: 460 KGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKK 519
Query: 323 --PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P +Y++++S L G +++ K EM+ K D Y T + CR G+ A
Sbjct: 520 CTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAF 579
Query: 381 KLLKELQNKN 390
++LK+++ +
Sbjct: 580 QVLKDMEKRG 589
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 10/216 (4%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC-RPSIRSYNILFTAFLSRGKNTYINHVY 234
+N+ I + K+ A +F+ M+ L P++ +Y ++ F G
Sbjct: 255 FNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEG--------M 306
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E + L M + ++ S N + G I + + +A + +M + P+ +SY+
Sbjct: 307 LEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEM-LGIGIEPDIYSYN 365
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ GLC G +AR L M R G +P + +Y++L+ G+V E L EMI
Sbjct: 366 IVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISN 425
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+ T +L + + GR EA LL+++ K
Sbjct: 426 NCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKG 461
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 104/245 (42%), Gaps = 20/245 (8%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A+Y+T I+ F K+S A F+ +K+ C ++++YN L S+ N +
Sbjct: 560 AIYDTFIHSFCREGKISSA---FQVLKDMEKRGCNKTLQTYNSLILGLGSK------NQI 610
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ + L +M G+ PD+ + N M+ +NDA + +M + PN S+
Sbjct: 611 F--ELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEM-LQKGISPNISSF 667
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI C K + E+ E+ Y + + L + G+V E + ++
Sbjct: 668 RILIKAFCKACDFKASHEVF-EIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALD 726
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTY--TKLLDVLEDDFGNS 411
+ + Y+ ++D +C+ + A +L L +K GY + + V+ D FG
Sbjct: 727 RSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDK----GYQFDPASFMPVI-DGFGKM 781
Query: 412 IRHHL 416
H+
Sbjct: 782 GNKHV 786
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+C P + +Y+ + + G+ ++ + F +M++ G++PD ++ I +
Sbjct: 519 KCTPDLVTYSTIISGLCKAGR--------LDDAKKKFIEMMSKGLQPDSAIYDTFIHSFC 570
Query: 266 LSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
++ A ++ M G +Y+ LI GL ++ + L DEM+ KG
Sbjct: 571 REGKISSAFQVLKDMEKRGCNKTLQ----TYNSLILGLGSKNQIFELYGLIDEMREKGVS 626
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
P +YN +++ L G + + L EM++K + ++R ++ C+
Sbjct: 627 PDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCK 676
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 16/233 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I+ A + +S A+ +F + P + +YNIL L K +N +
Sbjct: 261 YNALIHGLAREQGVSEALKLFGSVLRQGY---EPEVPTYNILIDGLL---KEDRVNEAFE 314
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +V G+EPD + I G + V DAL + M +P+ S++
Sbjct: 315 -----LFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE-KGCVPDVVSHNA 368
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+GLC + R A L M+ KG P++ S+N+L+ G+ ++ + EM+++
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428
Query: 356 RPVDFITYRTVLDEICR---RGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+TY ++D +C+ GR EA+ L + K + D TY+ L+D L
Sbjct: 429 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGL 481
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 16/271 (5%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
ED L+ L+ + P D +++ + L K E + +++ M A C A
Sbjct: 345 EDALLMLKDMDEKGCVP----DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG--CSPNA 398
Query: 175 L-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+ +NT+I A K +A+ FK M +P++ +YNIL + I
Sbjct: 399 ISFNTLICGQCRAGKWKKAMTTFKEMLKR---GVKPTVVTYNILVDGLCKARQEGRIKEA 455
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
LF M+ G PD+ + +++I G + ++DA R+ M +PN ++Y
Sbjct: 456 IT-----LFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM-EAKGCIPNVYTY 509
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LI GLC + A EL M KG VP + +Y +++SAL V++ + +E
Sbjct: 510 NSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLE 569
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
Y +++D +C R EA+KLL+
Sbjct: 570 AGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 143/328 (43%), Gaps = 46/328 (14%)
Query: 108 CNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATP 167
C V L E L++F+ A K+ F D TY+ + A E ++ +M+ +
Sbjct: 131 CKVGKLDE----ALKIFDGAVKRG-FVPDVVTYNALINGFCKADKLDEAQRILQRMV-SE 184
Query: 168 SFCGTEALYNTIIYFFA------EARKL-----------SRAVYVFKYMKNSRNLE---- 206
S YN+++ EAR L + + + + R LE
Sbjct: 185 SLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQ 244
Query: 207 ---------CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
C+P I SYN L L+R + E ++ LF ++ G EP++ +
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHG-LAREQGVS------EALK-LFGSVLRQGYEPEVPTY 296
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N +I G + + VN+A +F + V + P++ +Y I GLC GR ++A + +M
Sbjct: 297 NILIDGLLKEDRVNEAFELFSGL-VKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 355
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG VP S+N++++ L V+E L M K + I++ T++ CR G+
Sbjct: 356 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 415
Query: 378 EAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+AM KE+ + + TY L+D L
Sbjct: 416 KAMTTFKEMLKRGVKPTVVTYNILVDGL 443
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 121/265 (45%), Gaps = 19/265 (7%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTII 180
ELF+ K DA TY + L A ++ ++ M C + + +N +I
Sbjct: 314 ELFSGLVKHG-LEPDAITYTVFIDGLCKAGRVEDALLMLKDM--DEKGCVPDVVSHNAVI 370
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ +++ A + M+ C P+ S+N L GK +
Sbjct: 371 NGLCKEKRVDEAEVLLSGMEAK---GCSPNAISFNTLICGQCRAGK--------WKKAMT 419
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILS---NHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
FK+M+ G++P + + N ++ G + + +A+ +F M + +P+ +Y LI
Sbjct: 420 TFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAM-IEKGRVPDVVTYSALI 478
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GL G+ +AR L M+ KG +P+ +YNSL+S L +V+E ++ M+EK
Sbjct: 479 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCV 538
Query: 358 VDFITYRTVLDEICRRGRAGEAMKL 382
D ITY T++ +C++ +A+ L
Sbjct: 539 PDTITYGTIISALCKQEMVDKALAL 563
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + IL + L GK +E +Q++ G+ DI + N I G ++
Sbjct: 14 PDAYTVGILLRSLLKSGK--------IEKAHRFVEQLLVKGL-CDISTFNIYISGLCRAS 64
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ DA +F M + + PN +Y+ L+ GLC GR +A+ L + M + G+ P +Y
Sbjct: 65 RIGDAQTVFDGM-RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTY 123
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+ G+++E +K +++ D +TY +++ C+ + EA ++L+ + +
Sbjct: 124 NTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS 183
Query: 389 KNLI-DGYTYTKLLDVL 404
++L+ D TY L++ L
Sbjct: 184 ESLVPDVVTYNSLVNGL 200
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F M G P+ + N+++ G ++DA ++ +M + Y P+ +Y+ L+HG
Sbjct: 72 VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERM-IKAGYSPDVVTYNTLLHGF 130
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G+ A ++ D ++GFVP +YN+L++ +++E + L M+ + D
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDV 190
Query: 361 ITYRTVLDEICRRGRAGEA-MKLLKELQNKNLIDGYTYTKLLDVL 404
+TY ++++ +C+ GR EA M ++ + + N+I TY+ L+ L
Sbjct: 191 VTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVI---TYSTLISGL 232
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 16/233 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y I +A ++ A+ + K M C P + S+N + N +
Sbjct: 331 YTVFIDGLCKAGRVEDALLMLKDMDEK---GCVPDVVSHNAVI--------NGLCKEKRV 379
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L M G P+ S N++I G + A+ F +M + P +Y+
Sbjct: 380 DEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM-LKRGVKPTVVTYNI 438
Query: 296 LIHGLCA---QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
L+ GLC +GR K A L D M KG VP +Y++L+ L G++++ + L M
Sbjct: 439 LVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME 498
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
K + TY +++ +C + EA++L + K + D TY ++ L
Sbjct: 499 AKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISAL 551
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 144 TRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS- 202
TR L +A Y++ V+ +M+ F + Y+ ++ + A K+ A +F+ MK
Sbjct: 414 TRCLCSAGKYEKAFSVIREMIGQ-GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 472
Query: 203 -------------------------------RNLECRPSIRSYNILFTAFLSRGKNTYIN 231
R + C P++ +Y L A+L K +Y N
Sbjct: 473 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 532
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------GVVYN 285
LF+ M+++G P+I + +++I G+ + V A +IF +M V
Sbjct: 533 E--------LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 584
Query: 286 YL---------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
Y PN +Y L+ G C R + AR+L D M +G P+ Y++L+ L
Sbjct: 585 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 644
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL-KELQNKNLIDGY 395
G+++E + EM E P TY +++D + R A K+L K L+N +
Sbjct: 645 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 704
Query: 396 TYTKLLDVL 404
YT+++D L
Sbjct: 705 IYTEMIDGL 713
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 20/279 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY IM A + ++ N+M TP+ Y +I+ + +A+K+S A
Sbjct: 476 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV----VTYTALIHAYLKAKKVSYA 531
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY--------METIRCLFKQ 244
+F+ M + C P+I +Y+ L G+ ++ + + FKQ
Sbjct: 532 NELFETMLSEG---CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 588
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
++ P++ + +++ G+ S+ V +A ++ M + PN YD LI GLC G
Sbjct: 589 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM-EGCEPNQIVYDALIDGLCKVG 647
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ A+E+ EM GF + +Y+SL+ + K L +M+E + + Y
Sbjct: 648 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 707
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
++D +C+ G+ EA KL++ ++ K + TYT ++D
Sbjct: 708 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 746
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 55/260 (21%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNL-------------ECRPSIRSYNILFTAFL 222
Y+ +I +A ++ +A +F+ M S+++ RP++ +Y L F
Sbjct: 550 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 609
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-- 280
+ +E R L M +G EP+ +++I G +++A + +M
Sbjct: 610 KSHR--------VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 661
Query: 281 ----GVVYNY----------------------------LPNSFSYDYLIHGLCAQGRTKN 308
+Y Y PN Y +I GLC G+T
Sbjct: 662 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 721
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L M+ KG P+ +Y +++ + G++E ++ L M K +++TYR ++D
Sbjct: 722 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 781
Query: 369 EICRRGRAGEAMKLLKELQN 388
C+ G A LL+E++
Sbjct: 782 HCCKNGALDVAHNLLEEMKQ 801
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 30/281 (10%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F D Y + L A +++E D +N+M AT Y+T++ ++L R
Sbjct: 257 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV-VTYSTLLCGCLNKKQLGRC 315
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V M C PS + +N L A+ + G ++Y L K+MV G P
Sbjct: 316 KRVLNMMMMEG---CYPSPKIFNSLVHAYCTSGDHSYAYK--------LLKKMVKCGHMP 364
Query: 253 DIFSLNSMIKGYILSNH-------VNDALRIFHQM---GVVYNYL-PNSFSYDYLIHGLC 301
N +I G I + ++ A + + +M GVV N + +SF+ LC
Sbjct: 365 GYVVYNILI-GSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFT-----RCLC 418
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+ G+ + A + EM +GF+P + +Y+ +++ L ++E EM D
Sbjct: 419 SAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 478
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
TY ++D C+ G +A K E++ + TYT L+
Sbjct: 479 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 519
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 134/344 (38%), Gaps = 45/344 (13%)
Query: 74 VGKRSKADSKPALDDTQFRCA---VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQ 130
+ R+ AD+ +DD R + + + + + + V+ L P + F WA +Q
Sbjct: 58 IDARAIADAVTGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQ 117
Query: 131 PRFRHDASTYHIMT--------RKLGAAKMYQEMDD---VVNQMLATPSFCGTEALYNTI 179
++H A Y+ + K+ + Q DD V Q L N +
Sbjct: 118 IGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQFL------------NVL 165
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ S A+ +K+ R RPS +YN L AFL + +++
Sbjct: 166 VRKHCRNGSFSIALEELGRLKDFRF---RPSRSTYNCLIQAFLKADR--------LDSAS 214
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+ ++M + D F+L +AL + N++P++ Y LI G
Sbjct: 215 LIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE----TENFVPDTVFYTKLISG 270
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE--MIEKQRP 357
LC + A + + M+ +P+ +Y++L+ LN + K + M+E P
Sbjct: 271 LCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVLNMMMMEGCYP 329
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
I + +++ C G A KLLK++ + GY +L
Sbjct: 330 SPKI-FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 372
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 111/286 (38%), Gaps = 59/286 (20%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII--YFFAEARKLSRAVYVFKYMKNSR 203
K+G QE V ++ F T Y+++I YF + + L+ V + K ++NS
Sbjct: 645 KVGKLDEAQE----VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV-LSKMLENS- 698
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
C P++ Y + GK + Y L + M G +P++ + +MI G
Sbjct: 699 ---CAPNVVIYTEMIDGLCKVGKT---DEAYK-----LMQMMEEKGCQPNVVTYTAMIDG 747
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ + + L + +MG PN +Y LI C G A L +EMK+ +
Sbjct: 748 FGMIGKIETCLELLERMGS-KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 806
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWE-------------------MIEKQRP------- 357
+ Y ++ N E E++ L E +I+ QR
Sbjct: 807 HTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLL 864
Query: 358 ----------VDFI-TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
VD+ TY ++++ +C + A +L E+ K +I
Sbjct: 865 EEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 910
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN- 289
N ++E++ L ++ D P + +I I + + ALR+ ++ L +
Sbjct: 819 NKEFIESLG-LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 877
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
S +Y+ LI LC + + A +L EM +KG +P +S+ SL+ L N ++ E +
Sbjct: 878 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 933
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 16/268 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
RF D TY+ + K DV+ M+ + T+ YN I+ F A +L
Sbjct: 194 RFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVES-GIAPTKTTYNIILKGFFRAGQLRH 252
Query: 192 AVYVFKYMK--NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A F MK S++ C+P + SY + G+ +E R +F +M +G
Sbjct: 253 AWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQ--------LEKARKVFDEMAKEG 304
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
P + + N++I+ +V DA+ +F M V Y+PN +Y LI GLC G+
Sbjct: 305 CAPSVATYNALIQVICKKGNVEDAVTVFDGMRV-KGYVPNVVTYTVLIRGLCHAGKIDRG 363
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVL 367
+L + MK G P ++YN L+ L GE+E+ + +L+E + K + TY ++
Sbjct: 364 LKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGL-DLFEKMSKGEECLPNQDTYNIII 422
Query: 368 DEICRRGRAGEAMKLLKELQNKNLIDGY 395
+ R RA E M L + + + GY
Sbjct: 423 SAMFMRKRA-EDMVLAARMVEEMVDRGY 449
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 20/220 (9%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR--PSIRSYNILFTAFLSRGKNTYINH 232
L+N+++ +++R +A + R LE R P + +YN L + R K+T
Sbjct: 167 LFNSLLDALSKSRHAGKAASLV------RALEQRFTPDVVTYNTLADGW-CRVKDT---S 216
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY----LP 288
++ +R MV GI P + N ++KG+ + + A F QM + P
Sbjct: 217 RALDVLRL----MVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKP 272
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ SY ++HGL G+ + AR++ DEM ++G PS +YN+L+ + G VE+ V
Sbjct: 273 DVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVF 332
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
M K + +TY ++ +C G+ +KLL+ ++N
Sbjct: 333 DGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKN 372
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 16/239 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L++ SK + D +Y M LG A ++ V ++M A + A YN +I
Sbjct: 258 LQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEM-AKEGCAPSVATYNALI 316
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ + AV VF M+ + P++ +Y +L GK ++
Sbjct: 317 QVICKKGNVEDAVTVFDGMRVKGYV---PNVVTYTVLIRGLCHAGK--------IDRGLK 365
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L ++M N G EP + + N +I+ + L +F +M LPN +Y+ +I +
Sbjct: 366 LLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAM 425
Query: 301 CAQGRTKN---ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ R ++ A + +EM +G++P +N +++ L L G +E + L M EK R
Sbjct: 426 FMRKRAEDMVLAARMVEEMVDRGYLPRRFMFNRVLNGLMLTGN-QELSRKLLRMQEKYR 483
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 116/236 (49%), Gaps = 15/236 (6%)
Query: 170 CGTEAL--YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
CG + YN+++ + + K+S A +++ M RPS+ SYN + +G
Sbjct: 428 CGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKG---VRPSVVSYNNMILGHCQQGD- 483
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
M++ +F +M+ G++P++ + + ++ GY A ++ +M N
Sbjct: 484 -------MDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRG-ENIA 535
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+ F+ + +I+GLC GRT +++ ++ ++GF+P+ +YN ++ G V +
Sbjct: 536 PSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAV 595
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
EM + + TY +++ C+ A+K++ E++NK + +D Y L+D
Sbjct: 596 YTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALID 651
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 121/256 (47%), Gaps = 23/256 (8%)
Query: 142 IMTRKLGAAKMYQEMDDVV---NQMLATPSFCGTE---ALYNTIIYFFAEARKLSRAVYV 195
I TR +G +M + V +ML+ CG + T++ + + L A+ +
Sbjct: 296 IFTRVIGVCMKQGKMLEAVKVKGEMLS----CGKPMNVVVATTLMKGYCKQGDLDSALEL 351
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M + N C P+ +Y ++ G M+ ++ QM N I P +F
Sbjct: 352 FDKM--NENGIC-PNNVTYAVIIEWCCKNGN--------MDKAYEIYNQMKNKDISPTVF 400
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
++NS+I+GY+ + +A ++F + V + N F+Y+ L+ LC +G+ A + ++
Sbjct: 401 NVNSLIRGYLKARSPEEASKLFDE--AVACGIANVFTYNSLLSWLCKEGKMSEACSIWEK 458
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M RKG PS SYN+++ G+++ EM+EK + ITY ++D ++G
Sbjct: 459 MVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGD 518
Query: 376 AGEAMKLLKELQNKNL 391
A L ++ +N+
Sbjct: 519 TEYAFGLYDRMRGENI 534
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ +YN + F+ G VY E M G+ P++F+ ++I G+ SN
Sbjct: 571 PTCMTYNCIIDGFVKEGSVNSALAVYTE--------MCKIGVSPNVFTYTNLINGFCKSN 622
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+++ AL++ +M G+ + Y LI G C +G NA +L E++ G P+
Sbjct: 623 NMDLALKVMDEMKNKGIELDVT----VYCALIDGFCRKGDMVNASQLLSELQEVGLSPNK 678
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
Y+S++S +E + MI + P D Y T++ + + G+ A +L E
Sbjct: 679 VVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAE 738
Query: 386 LQNKNLI-DGYTYTKLL 401
+ K ++ D TY+ L+
Sbjct: 739 MLAKGIMPDLITYSVLI 755
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME L K+M+N+GI D+ ++I G + + A ++ +M + +P+ +Y
Sbjct: 694 MEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEM-LAKGIMPDLITYS 752
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LIHGLC +G+ +NA+++ ++M RK P+ YN+L++ G ++E + EM++K
Sbjct: 753 VLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDK 812
Query: 355 QRPVDFITYRTVLDEICRRG 374
D TY +++ + G
Sbjct: 813 GLVPDDTTYDILVNGKVKDG 832
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 133/314 (42%), Gaps = 41/314 (13%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTY----HIMTRKLG------------AAKMYQEMD 157
Q DP L F WAS++ HI+T+ A+ + +
Sbjct: 75 QNDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGPVP 134
Query: 158 DVVNQMLATPS----FCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
VV L S F ++N ++ + + ++++ AV F + + P +
Sbjct: 135 SVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEK---DIVPCLTV 191
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
NI + + KN I R ++ +M + G++ D +++ MI+ + + +A
Sbjct: 192 MNIFLSELV---KNNMIREA-----RDVYNKMASKGVKGDCATISVMIRASMREGKLEEA 243
Query: 274 LRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
F + GV + + +Y +I +C + + A L EM+ KG+VP +
Sbjct: 244 EGWFREAKNKGVELD----ARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTR 299
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
++ G++ E VK EM+ +P++ + T++ C++G A++L ++ N+N
Sbjct: 300 VIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKM-NEN 358
Query: 391 LI--DGYTYTKLLD 402
I + TY +++
Sbjct: 359 GICPNNVTYAVIIE 372
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 17/187 (9%)
Query: 158 DVVN--QMLATPSFCG---TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
D+VN Q+L+ G + +Y+++I F + + + A+++ K M N + C ++
Sbjct: 658 DMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMIN-EGIPC--DLQ 714
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
Y L + L GK + + +Y E M+ GI PD+ + + +I G + +
Sbjct: 715 IYTTLISGLLKEGKLLFASELYAE--------MLAKGIMPDLITYSVLIHGLCNKGQLEN 766
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A +I M P F Y+ LI G +G + A L +EM KG VP +Y+ LV
Sbjct: 767 AQKILEDMDRKC-MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILV 825
Query: 333 SALALNG 339
+ +G
Sbjct: 826 NGKVKDG 832
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 117/304 (38%), Gaps = 29/304 (9%)
Query: 101 RFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVV 160
R N+ C +++D + CL + N I +L M +E DV
Sbjct: 169 RINDAVDCFNSLIEKDIVPCLTVMN----------------IFLSELVKNNMIREARDVY 212
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+M A+ G A + +I KL A F+ KN + +E R+Y+I+ A
Sbjct: 213 NKM-ASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKN-KGVEL--DARAYSIVIEA 268
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
+ + L ++M + G P +I + + +A+++ +M
Sbjct: 269 VCKKPDSV--------AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEM 320
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
+ N L+ G C QG +A EL D+M G P++ +Y ++ NG
Sbjct: 321 LSCGKPM-NVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGN 379
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKL 400
+++ + +M K +++ + EA KL E + + +TY L
Sbjct: 380 MDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSL 439
Query: 401 LDVL 404
L L
Sbjct: 440 LSWL 443
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 131/291 (45%), Gaps = 29/291 (9%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT---PSFCGTEALYNTIIYFFAE 185
KQ D TY + L ++ + + +M+ P+ C +N++I +
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVC----TFNSVIDGLCK 295
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
K+ A + +YM P + +YN++ + RG+ ++ R +F M
Sbjct: 296 EGKVEDAEEIMRYMIEKG---VDPDVITYNMIIDGYGLRGQ--------VDRAREIFDSM 344
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
+N IEP+I S N +I GY +++A+++ ++ P+ + + L+HGL GR
Sbjct: 345 INKSIEPNIISYNILINGYARQKKIDEAMQVCREISQ-KGLKPSIVTCNVLLHGLFELGR 403
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
TK+A+ DEM G +P ++ +L+ NG VEE + + ++ ++ + Y
Sbjct: 404 TKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTA 463
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVLED 406
V+D +C+ G+ +A ++L L I GY LLD +D
Sbjct: 464 VIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKD 514
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 12/219 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y T++ + +A + + M+ +P+ Y+I+ AF G
Sbjct: 178 EVMYGTVMNGLCKKGHTQKAFDLLRLMEQGST---KPNTCIYSIVIDAFCKDG------- 227
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
++ L +M I PDIF+ +++I + + +F +M + N PN +
Sbjct: 228 -MLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEM-IHLNIYPNVCT 285
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
++ +I GLC +G+ ++A E+ M KG P +YN ++ L G+V+ + MI
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMI 345
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
K + I+Y +++ R+ + EAM++ +E+ K L
Sbjct: 346 NKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGL 384
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
GI + N++++G N V DA+ +F ++ PN Y +++GLC +G T+
Sbjct: 137 GIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQK 196
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L M++ P++ Y+ ++ A +G ++ L EM +K P D TY T++D
Sbjct: 197 AFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
+C+ + L E+ + N+ T+ ++D L
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 108/269 (40%), Gaps = 46/269 (17%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+++ G ++ + M+ S YN +I +A +K+ A+ V
Sbjct: 317 DVITYNMIIDGYGLRGQVDRAREIFDSMI-NKSIEPNIISYNILINGYARQKKIDEAMQV 375
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ + +PSI + N+L G+ ++ + F +M++ G PD++
Sbjct: 376 CREISQKG---LKPSIVTCNVLLHGLFELGRT--------KSAQNFFDEMLSAGHIPDLY 424
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM-----------------GVVYN------------- 285
+ +++ GY + V +A+ FH++ G+ N
Sbjct: 425 THCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKL 484
Query: 286 ----YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
P+ +Y +I G C +G A+++ +M+ G + +++YN +V + +V
Sbjct: 485 PLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKV 544
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEI 370
E L E+ K + T ++D I
Sbjct: 545 SEMKAFLEEIAGKSFSFEAATVELLMDII 573
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 236 ETIRCL------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ---------- 279
E ++CL F+QMV P + S + ++K + H + + +F +
Sbjct: 48 ENVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHE 107
Query: 280 --MGVVYNY---------------------LP-NSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +V N +P N ++ L+ GL A+ + K+A L +
Sbjct: 108 FILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKK 167
Query: 316 MKRKGFV-PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+ R+ P+ Y ++++ L G ++ L M + + Y V+D C+ G
Sbjct: 168 LVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDG 227
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
A LL E++ K++ D +TY+ L+D L
Sbjct: 228 MLDGATSLLNEMKQKSIPPDIFTYSTLIDAL 258
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 19/217 (8%)
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+++ R C P+ +YN L AF G+ ++ L M G++P++
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGE--------VDRAERLVDMMREGGLKPNLV 228
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NS++ G + + DA ++F +M V P+ SY+ L+ G C G + A + E
Sbjct: 229 TFNSVVNGICKAGRMEDARKVFDEM-VKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAE 287
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M RKG +P ++ SL+ + G +E V + EM E+ ++ IT+ ++D C++G
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGF 347
Query: 376 AGEAMKLLKELQN----------KNLIDGYTYTKLLD 402
+A+ ++E++ LI+GY +D
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMD 384
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 112/228 (49%), Gaps = 14/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ ++A L A F M + P++ +YNIL A RG +
Sbjct: 126 YNAVLLALSDA-SLPSARRFFDSMLSD---GVAPNVYTYNILVRALCGRG--------HR 173
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + M G +P+ + N+++ + + V+ A R+ M PN +++
Sbjct: 174 KEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMRE-GGLKPNLVTFNS 232
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+++G+C GR ++AR++ DEM ++G P SYN+LV G E + EM K
Sbjct: 233 VVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKG 292
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D +T+ +++ +C+ G A+ L++E++ + L ++ T+T L+D
Sbjct: 293 IMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALID 340
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 132/327 (40%), Gaps = 68/327 (20%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
TY+I+ R L +E V+ M + C A+ YNT++ F A ++ RA +
Sbjct: 159 TYNILVRALCGRGHRKEALSVLRDMRG--AGCDPNAVTYNTLVAAFCRAGEVDRAERLVD 216
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR------------------ 239
M+ +P++ ++N + G+ V+ E ++
Sbjct: 217 MMREG---GLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYC 273
Query: 240 ---------CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYL 287
+F +M GI PD+ + S+I + ++ A+ + +M G+ N +
Sbjct: 274 KVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEI 333
Query: 288 -------------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEM 316
P+ Y+ LI+G C GR AREL EM
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
+ KG P +Y++++SA NG+ + +M+E D ITY +++ +C R
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453
Query: 377 GEAMKLLKELQNKNL-IDGYTYTKLLD 402
G+A L K + + L D TYT L+D
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLID 480
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 12/214 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E + +I F + L A+ + M+ R +PS+ YN L + G+
Sbjct: 332 EITFTALIDGFCKKGFLDDALLAVREMRQCR---IQPSVVCYNALINGYCMVGR------ 382
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
M+ R L ++M G++PD+ + ++++ Y + + A ++ QM + LP++ +
Sbjct: 383 --MDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQM-LENGVLPDAIT 439
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI LC + R +A L M G P +Y SL+ G VE + EM+
Sbjct: 440 YSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMV 499
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ D +TY +++ + + R EA +LL +L
Sbjct: 500 KAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKL 533
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 110/242 (45%), Gaps = 28/242 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + ++ A + + M+ +P + +Y+ + +A+ G H
Sbjct: 370 YNALINGYCMVGRMDEARELVREMEAK---GVKPDVVTYSTILSAYCKNGDT----HSAF 422
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L +QM+ +G+ PD + +S+I+ + DA +F M + P+ +Y
Sbjct: 423 Q----LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNM-ISLGLQPDEVTYTS 477
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C +G + A L DEM + G +P +Y+ L++ L+ + +E + L+++ ++
Sbjct: 478 LIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEE 537
Query: 356 ---------------RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
R + + +L C +G EA K+ + + ++N +DG Y+
Sbjct: 538 PVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSV 597
Query: 400 LL 401
L+
Sbjct: 598 LI 599
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 112/271 (41%), Gaps = 26/271 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY + R L K + + M++ E Y ++I + + RA+ +
Sbjct: 436 DAITYSSLIRVLCEEKRLGDAHVLFKNMISL-GLQPDEVTYTSLIDGHCKEGNVERALSL 494
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK----QMVNDGIE 251
M + L P + +Y++L LS+ T E R LFK + V I+
Sbjct: 495 HDEMVKAGVL---PDVVTYSVLING-LSKSARTK------EAQRLLFKLYHEEPVPANIK 544
Query: 252 PDIF----------SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
D S+ +++KG+ + +N+A +++ + + N+ + Y LIHG C
Sbjct: 545 YDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSI-LDRNWNLDGSVYSVLIHGHC 603
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+G A +M + GF P+S S SL+ L G V E + + +++ D
Sbjct: 604 REGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAE 663
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ ++D + G + +L + L+
Sbjct: 664 ASKALIDLNLKEGNVDAVLDVLHGMARDGLL 694
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 139/303 (45%), Gaps = 13/303 (4%)
Query: 103 NNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQ 162
+ + L + Q DP L++ N A + F + Y + +KLG A + M+ +V +
Sbjct: 55 DQDRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVRE 114
Query: 163 MLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL 222
M G + + + +A R+ AV + + N+ ++ ++ YN L L
Sbjct: 115 MRREGHEAGA-GVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAV--YNHLLNV-L 170
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV 282
+ G M+ + ++ +M + GI+PD+ +LN++IK ++ V A+ + +M
Sbjct: 171 AEGSR-------MKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS- 222
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+ P+ ++ L+ G +G + A + +M G P+ + N L++ G VE
Sbjct: 223 SHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVE 282
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK-ELQNKNLIDGYTYTKLL 401
+ + + + I D +TY T + +C+ G A+K++ LQ + D +TY ++
Sbjct: 283 DALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 342
Query: 402 DVL 404
+ L
Sbjct: 343 NCL 345
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 122/256 (47%), Gaps = 13/256 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +T++ + L + +E D+ + L +N +I + + +
Sbjct: 369 DTTTFNTLIVALCSQNRLEEALDLARE-LTVKGLSPDVYTFNILINALCKVGDPHLGIRL 427
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ MK+S C P +YNIL S GK +N + L K+M ++G
Sbjct: 428 FEEMKSSG---CAPDEVTYNILIDHLCSMGK--LVNALD------LLKEMESNGCPRSTV 476
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N++I + +A +F QM + ++ +++ LI GLC R +A EL ++
Sbjct: 477 TYNTIIDALCKQMRIEEAEEVFDQMDA-HGISRSAVTFNTLIDGLCKAKRIDDATELIEQ 535
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M ++G PS+ +YNS+++ G++++ L M +D +TY T+++ +C+ GR
Sbjct: 536 MVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 595
Query: 376 AGEAMKLLKELQNKNL 391
A+KLL+ ++ K +
Sbjct: 596 TQVALKLLRGMRIKGI 611
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 21/299 (7%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
L N + DP + + LF K D TY+I+ L + D++ +M +
Sbjct: 411 LINALCKVGDPHLGIRLFEEM-KSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESN 469
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKN---SRNLECRPSIRSYNILFTAFLS 223
T YNTII + ++ A VF M SR S ++N L L
Sbjct: 470 GCPRST-VTYNTIIDALCKQMRIEEAEEVFDQMDAHGISR------SAVTFNTLIDG-LC 521
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
+ K ++ L +QMV +G++P + NS++ Y + A I M
Sbjct: 522 KAKR-------IDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETM-TA 573
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+ + +Y LI+GLC GRT+ A +L M+ KG P+ K+YN ++ +L + +
Sbjct: 574 NGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 633
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA-GEAMKLLKELQNKNLIDGYTYTKLL 401
+ EM E P D +TY+ V +CR G EA L E+ NK + ++ ++L
Sbjct: 634 ALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRML 692
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 32/260 (12%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT---- 228
E + T++ F E + A+ V M + C P+ + N+L + G+
Sbjct: 230 ETTFTTLMQGFIEEGSIEAALRVKTKMMETG---CSPTRVTVNVLINGYCKMGRVEDALG 286
Query: 229 YINH-----------VYMETIRCLFKQ------------MVNDGIEPDIFSLNSMIKGYI 265
YI Y + CL + M+ +G +PD+F+ N++I
Sbjct: 287 YIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLS 346
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ +++A I +QM V LP++ +++ LI LC+Q R + A +L E+ KG P
Sbjct: 347 KNGELDEAKGIVNQM-VDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDV 405
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
++N L++AL G+ ++ EM D +TY ++D +C G+ A+ LLKE
Sbjct: 406 YTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKE 465
Query: 386 LQNKNLI-DGYTYTKLLDVL 404
+++ TY ++D L
Sbjct: 466 MESNGCPRSTVTYNTIIDAL 485
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 19/253 (7%)
Query: 105 EELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML 164
+ LC M ++E E+F+ R A T++ + L AK + +++ QM+
Sbjct: 483 DALCKQMRIEEAE----EVFDQMDAHGISRS-AVTFNTLIDGLCKAKRIDDATELIEQMV 537
Query: 165 ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR 224
+ YN+I+ + + L +A + + M + E + +Y L
Sbjct: 538 -KEGLQPSNITYNSILTHYCKQGDLKKAADILETM-TANGFEI--DVVTYGTLINGLCKA 593
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
G+ V ++ L + M GI P + N +I+ N++ DAL +F +M V
Sbjct: 594 GRT----QVALK----LLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEV- 644
Query: 285 NYLPNSFSYDYLIHGLC-AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
P++ +Y + GLC G K A + EM KGF+P S+ L L G +
Sbjct: 645 GEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDY 704
Query: 344 TVKNLWEMIEKQR 356
+ + +IEK +
Sbjct: 705 LISAIELIIEKAK 717
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ D +++ + + L AK + + ++V +ML E +N +I + ++ A+
Sbjct: 208 KPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRIN-EMTFNILIDSLCQNGQVKDAI 266
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
VF+ M R C P I +Y+ L F +G + E LF+ M D
Sbjct: 267 EVFELMPKYR---CMPDIVTYSSLINGFSEQGLD--------EMAFDLFRSM---PCRAD 312
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
IFS N+ +KG ++ +DA + M V + LPN +++ LI LC +G A ++
Sbjct: 313 IFSYNATLKGLCMAARWDDAGELIADM-VTEDCLPNEVTFNILISSLCQKGLVNRAIDVY 371
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
++M + G P +YN+L++ + G +++ +K L M P D I+Y ++L +CR
Sbjct: 372 EQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM--PCEP-DTISYNSILKGLCRA 428
Query: 374 GRAGEAMKLLKELQNKN 390
R +A KL+ E+ KN
Sbjct: 429 ERWKDAEKLVTEMLRKN 445
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 17/215 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYM-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
YNT++ A++ +A + + M +NS C P+ ++ AF G
Sbjct: 10 YNTVLKGLCCAKQWEQAEELMREMIRNS----CHPNEVTFATQIRAFCQNG--------L 57
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++ L +QM G PD+ ++++ G+ V++AL++ + M PN+ Y+
Sbjct: 58 LDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLC----RPNTVCYN 113
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+ GLC GR + EL EM RK P+ ++++L+++L N VE V+ L +M +
Sbjct: 114 AALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKY 173
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
D ++Y T++ + RA +A+KLLK + K
Sbjct: 174 GYMPDVVSYNTIISCFSDQARADDALKLLKSMLCK 208
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 128/270 (47%), Gaps = 20/270 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + + L AK +++ ++++ +M+ S E + T I F + L RAV +
Sbjct: 6 DTYTYNTVLKGLCCAKQWEQAEELMREMIRN-SCHPNEVTFATQIRAFCQNGLLDRAVEL 64
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M C P + Y+ L F G+ E ++ L + P+
Sbjct: 65 LEQMPK---YGCTPDVIIYSTLVNGFSEHGRVD-------EALKLLNTMLC----RPNTV 110
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
N+ +KG ++ + + +M V + PN ++ LI+ LC + A E+ ++
Sbjct: 111 CYNAALKGLCIAGRWEEVGELIAEM-VRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQ 169
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M++ G++P SYN+++S + ++ +K L M+ K D I++ VL +C+ R
Sbjct: 170 MQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKP---DTISFNAVLKCLCKAKR 226
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+A++L+ ++ K+ I+ T+ L+D L
Sbjct: 227 WYDAVELVAKMLKKDCRINEMTFNILIDSL 256
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+C P+ ++NIL ++ +G VY +QM GI PDIF+ N++I GY
Sbjct: 343 DCLPNEVTFNILISSLCQKGLVNRAIDVY--------EQMPKYGITPDIFTYNALINGYS 394
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
++DAL+ M P++ SY+ ++ GLC R K+A +L EM RK P+
Sbjct: 395 EQGRLDDALKFLSTMPCE----PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNE 450
Query: 326 KSY 328
++
Sbjct: 451 VTF 453
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ PD ++ N+++KG + A + +M + + PN ++ I C G A
Sbjct: 3 VAPDTYTYNTVLKGLCCAKQWEQAEELMREM-IRNSCHPNEVTFATQIRAFCQNGLLDRA 61
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
EL ++M + G P Y++LV+ + +G V+E +K L M+ RP + + Y L
Sbjct: 62 VELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML--CRP-NTVCYNAALKG 118
Query: 370 ICRRGRAGEAMKLLKELQNKN 390
+C GR E +L+ E+ K+
Sbjct: 119 LCIAGRWEEVGELIAEMVRKD 139
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 14/270 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F + TY I+ M+ + ++ +M A ++ YN +IY + ++ A
Sbjct: 361 FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG-YNGMIYALCKDGRMDEA 419
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + + M R+ C P I SYN + N+ ME +F+ ++ +G+
Sbjct: 420 MGLIQEM---RSQGCNPDICSYNTIIYHL--------CNNEQMEEAEHMFENLLEEGVVA 468
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + N++I + DA+R+ +M +++ + SY+ LI +C G + L
Sbjct: 469 NGITYNTIIHALLRDGRWQDAVRLAKEM-ILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 527
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+EM KG P++ SYN L+S L V + ++ +M+ + D +TY T+++ +C+
Sbjct: 528 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 587
Query: 373 RGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
G A+ LL++L N+N+ D TY L+
Sbjct: 588 MGWMHAALNLLEKLHNENVHPDIITYNILI 617
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 17/255 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA Y + L E ++N+ML G A NT L R
Sbjct: 193 DAVLYQTVIHALCDQGGVTEAATLLNEML----LMGCAADVNTFDDVVRGMCGLGRVREA 248
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ + C P + +Y L L R + + R + ++ E ++
Sbjct: 249 ARLVDRMMTKGCMPGVMTYGFLLQG-LCRVRQA-------DEARAMLGRVP----ELNVV 296
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
N++I G + + +A ++ MG+ P++ +Y L+HGLC GR +A L E
Sbjct: 297 LFNTVIGGCLAEGKLAEATELYETMGL-KGCQPDAHTYSILMHGLCKLGRIGSAVRLLRE 355
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M++KGF P+ +Y ++ + NG ++T L EM K ++ Y ++ +C+ GR
Sbjct: 356 MEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGR 415
Query: 376 AGEAMKLLKELQNKN 390
EAM L++E++++
Sbjct: 416 MDEAMGLIQEMRSQG 430
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
P C YNTIIY ++ A ++F+ + + + +YN + A L G+
Sbjct: 433 PDICS----YNTIIYHLCNNEQMEEAEHMFENLLEEGVVA---NGITYNTIIHALLRDGR 485
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
+ + +R L K+M+ G D+ S N +IK +V+ +L + +M
Sbjct: 486 -------WQDAVR-LAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM-AEKGI 536
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
PN+ SY+ LI LC + R ++A EL +M +G P +YN+L++ L G + +
Sbjct: 537 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 596
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICR 372
L ++ + D ITY ++ C+
Sbjct: 597 LLEKLHNENVHPDIITYNILISWHCK 622
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 94/248 (37%), Gaps = 43/248 (17%)
Query: 178 TIIYFFAEAR---KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
T F AR +L RA ++ C P Y + A +G T
Sbjct: 158 TTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT------ 211
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
L +M+ G D+ + + +++G V +A R+ +M + +P +Y
Sbjct: 212 --EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM-MTKGCMPGVMTYG 268
Query: 295 YLIHGLC-------------------------------AQGRTKNARELCDEMKRKGFVP 323
+L+ GLC A+G+ A EL + M KG P
Sbjct: 269 FLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP 328
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ +Y+ L+ L G + V+ L EM +K + +TY VL C+ G + LL
Sbjct: 329 DAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALL 388
Query: 384 KELQNKNL 391
+E+ K L
Sbjct: 389 EEMSAKGL 396
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Query: 241 LFKQMVN-DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
L+++MV+ D + P F+ + ++AL + M + +P++ Y +IH
Sbjct: 145 LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGM-ARHGCVPDAVLYQTVIHA 203
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC QG A L +EM G +++ +V + G V E + + M+ K
Sbjct: 204 LCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPG 263
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+TY +L +CR +A EA +L + N++
Sbjct: 264 VMTYGFLLQGLCRVRQADEARAMLGRVPELNVV 296
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P +F++ LC GR A L M R G VP + Y +++ AL G V E
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
L EM+ D T+ V+ +C GR EA +L+ + K + G TY LL L
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
E+FN + Q + +ASTY + +M++V + M+ G ++N IY
Sbjct: 378 EIFN-SMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRH-VFNIEIY 435
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ + +L A F M+ + P I +Y + G+ ++
Sbjct: 436 AYCKCGRLDEASLTFNKMQQQGFM---PDIVAYTTVIDGLCKIGR--------LDDAMSR 484
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F QM++DG+ PDI + N++I G+ L A +F++M + PN +++ +I L
Sbjct: 485 FCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEM-MDRGIPPNVNTFNSMIDKLF 543
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE-KQRPV-- 358
+G+ AR+L D M R G P+ SYN+++ + GEV E +K L +M+ +P
Sbjct: 544 KEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAV 603
Query: 359 ----------------DFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
D +T +T++D C GR + + L +E+ K
Sbjct: 604 TFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGK 650
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 119/274 (43%), Gaps = 22/274 (8%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R + TY ++ L + ++ E ++ N M+ + + Y ++++ +A L
Sbjct: 354 RPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQK-PNASTYGSLLHGYATEGNLVD-- 410
Query: 194 YVFKYMKNSRNLEC----RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
M N ++L RP +NI A+ G+ ++ F +M G
Sbjct: 411 -----MNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGR--------LDEASLTFNKMQQQG 457
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
PDI + ++I G ++DA+ F QM + P+ +++ LIHG G+ + A
Sbjct: 458 FMPDIVAYTTVIDGLCKIGRLDDAMSRFCQM-IDDGLSPDIITFNTLIHGFALHGKWEKA 516
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
EL EM +G P+ ++NS++ L G+V E K M + ++Y T++
Sbjct: 517 EELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHG 576
Query: 370 ICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
G GE MKLL ++ L T+ LLD
Sbjct: 577 YFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLD 610
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 16/238 (6%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQE-MDDVVNQMLATPSFCGTEAL--YNTIIYFFAEARKL 189
R A T+ + R L A K + M+ V+ +M P T + Y T++ +K
Sbjct: 175 LRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRM---PELGCTPDVFSYTTLLKGLCAEKKC 231
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A + M + C P++ SY + F G + Y LF +M++ G
Sbjct: 232 EEAAELIHMMAEDGD-NCPPNVVSYTTVIHGFFKEGD---VGKAYT-----LFCKMLDHG 282
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
I P++ + NS+I G ++ A + QM + + +PN +Y+ LIHG + G+ A
Sbjct: 283 IPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM-IDEHIMPNCTTYNSLIHGYLSSGQWTEA 341
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+ EM R G P+ +Y+ L+ L +G E + MI+ + + TY ++L
Sbjct: 342 VRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLL 399
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 111/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I+ + + + + AV + K M SR+ + RP++ +Y++L G ++
Sbjct: 325 YNSLIHGYLSSGQWTEAVRILKEM--SRDGQ-RPNVVTYSMLIDCLCKSG-------LHA 374
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R +F M+ G +P+ + S++ GY ++ D + M V P ++
Sbjct: 375 EA-REIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLM-VQNGMRPGRHVFNI 432
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
I+ C GR A ++M+++GF+P +Y +++ L G +++ + +MI+
Sbjct: 433 EIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDG 492
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
D IT+ T++ G+ +A +L E+ ++ + T+ ++D L
Sbjct: 493 LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKL 542
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 126/296 (42%), Gaps = 19/296 (6%)
Query: 112 TLQEDPLVCLELFNWASKQ--PRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
++++ P + + +FN ++ + D +T+ I+ A + Q++ T
Sbjct: 117 SVRDGPALAVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKT-GL 175
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
+ ++ ++ S A+ + ++ L C P + SY L + K
Sbjct: 176 RAQAVTFTPLLRTLCAEKRTSDAMNIV--LRRMPELGCTPDVFSYTTLLKGLCAEKK--- 230
Query: 230 INHVYMETIRCLFKQMVNDG--IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
E L M DG P++ S ++I G+ V A +F +M + +
Sbjct: 231 -----CEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKM-LDHGIP 284
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN + + +I GLC A + +M + +P+ +YNSL+ +G+ E V+
Sbjct: 285 PNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRI 344
Query: 348 LWEMI-EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
L EM + QRP + +TY ++D +C+ G EA ++ + Q+ + TY LL
Sbjct: 345 LKEMSRDGQRP-NVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLL 399
>gi|302811221|ref|XP_002987300.1| hypothetical protein SELMODRAFT_125836 [Selaginella moellendorffii]
gi|300144935|gb|EFJ11615.1| hypothetical protein SELMODRAFT_125836 [Selaginella moellendorffii]
Length = 511
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 22/275 (8%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT-PSFCGTEALYNTIIYFFAEARKLSRA 192
+ DA TY+I+ L QE ++ L + E LY +I + K A
Sbjct: 76 KADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRHELLYEALIGGLCKVGKYDHA 135
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ VF+ MK PS SYNI+ A + RG+N E LF++M P
Sbjct: 136 MAVFRKMK-------LPSSMSYNIVIAACVKRGRN--------EAAVELFREMKVKKRVP 180
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
DIF+ N++I+ + +AL I +M V PN ++ L+HGLC R A +
Sbjct: 181 DIFTFNTVIQSLSKAGKFKEALDIVDEM-VWLQCSPNELTFGLLVHGLCKAKRALEAESV 239
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI---EKQRPVDFITYRTVLDE 369
+ M R G VP +L+S G V++ + M+ ++ + T+ ++
Sbjct: 240 LEVMDRVGCVPDVVLLTALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHG 299
Query: 370 ICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLD 402
+C+ + GEA L++ ++++ + D +T+ ++D
Sbjct: 300 LCKANKVGEADALVRRMEDECGVAPDEFTFNTIID 334
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 121/281 (43%), Gaps = 14/281 (4%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T+ ++ L AK E + V+ M L I E R + A +F+
Sbjct: 219 TFGLLVHGLCKAKRALEAESVLEVMDRVGCVPDVVLLTALISGHLKEGR-VDDASRLFER 277
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND-GIEPDIFSL 257
M + +P++R++NI+ K + L ++M ++ G+ PD F+
Sbjct: 278 MLSGGQRWSKPNLRTFNIMIHGLCKANKVGEAD--------ALVRRMEDECGVAPDEFTF 329
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N++I G+ + A + Q + P+S ++ L+ C Q R A EL ++M
Sbjct: 330 NTIIDGHFKAGDSKGAFKQLFQEMSRFGCHPDSVTFTILVSESCKQRRIHEALELVEQMT 389
Query: 318 RK--GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDEICRR 373
+ G P + S+N+L+ L +G +EE V W + ++R D +T+ ++ + C++
Sbjct: 390 KNKGGCAPDTLSFNALLGCLCCDGRLEEAVAKFWGEMRERRECWPDAVTHALLVRQCCKQ 449
Query: 374 GRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNSIRH 414
A +++ E+ ++ + +L L + RH
Sbjct: 450 RNIELACRIVDEMLHRGFVPTPGIASMLVNLIQSGSDDARH 490
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 34/179 (18%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L M++ G PD + NS++ G N V A++++ +M + ++F+Y+ L+HGL
Sbjct: 31 LVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLYEKMSRSF-VKADAFTYNILLHGL 89
Query: 301 CAQGRTKNA----------RE---------------LCDEMK--------RKGFVPSSKS 327
C GR + A RE LC K RK +PSS S
Sbjct: 90 CKGGRIQEACQKLSAALRDREAPVRHELLYEALIGGLCKVGKYDHAMAVFRKMKLPSSMS 149
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
YN +++A G E V+ EM K+R D T+ TV+ + + G+ EA+ ++ E+
Sbjct: 150 YNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTFNTVIQSLSKAGKFKEALDIVDEM 208
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 19/251 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D T +I+ L + + ++V+ M+ + T N+++ + K+ A+ +
Sbjct: 8 DVKTCNIVVDSLCKGGLVDDAAELVHGMMDKGPYPDT-VTCNSLLDGLFKVNKVEHAMKL 66
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
++ M S + +YNIL G+ +R D P
Sbjct: 67 YEKMSRSF---VKADAFTYNILLHGLCKGGRIQEACQKLSAALR--------DREAPVRH 115
Query: 256 SL--NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
L ++I G + A+ +F +M LP+S SY+ +I +GR + A EL
Sbjct: 116 ELLYEALIGGLCKVGKYDHAMAVFRKM-----KLPSSMSYNIVIAACVKRGRNEAAVELF 170
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
EMK K VP ++N+++ +L+ G+ +E + + EM+ Q + +T+ ++ +C+
Sbjct: 171 REMKVKKRVPDIFTFNTVIQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKA 230
Query: 374 GRAGEAMKLLK 384
RA EA +L+
Sbjct: 231 KRALEAESVLE 241
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 13/297 (4%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ 154
+ L P F++E + NV+ + L+ F W + F H+ T+ + LG A
Sbjct: 3 IRNLVPSFDHELVYNVLHSAKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLN 62
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
++ M E ++ +I + + + +V +F M+ L +I+SY
Sbjct: 63 HARCILLDM-PKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFDRME---ELGVERTIKSY 118
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ LF L RG+ YM R F +M+++GIEP + N +I G+ LS V A
Sbjct: 119 DALFKVILRRGR-------YMMAKR-YFNKMLSEGIEPTRHTFNVLIWGFFLSGKVETAN 170
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R F M P+ +Y+ +I+G + A + EMK + P+ +Y +L+
Sbjct: 171 RFFEDMK-SREISPDVVTYNTMINGYYRVKKMXEAEKYFVEMKGRNIEPTVVTYTTLIKG 229
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+V++ ++ + EM + ITY T+L +C + EA +LKE+ +K L
Sbjct: 230 YVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMMDKYL 286
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 161 NQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTA 220
N+ML+ T +N +I+ F + K+ A F+ MK+ E P + +YN +
Sbjct: 139 NKMLSE-GIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSR---EISPDVVTYNTMI-- 192
Query: 221 FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
N Y M F +M IEP + + ++IKGY+ + V+DALR+ +M
Sbjct: 193 ------NGYYRVKKMXEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEM 246
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS-YNSLVSALALNG 339
+ PN+ +Y L+ GLC + AR + EM K P+ S + L+++ +G
Sbjct: 247 K-GFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSG 305
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
++ L MI P + Y +++ C+ G+ +A+KLL ++ K++I
Sbjct: 306 HLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKVIEKDII 358
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 23/240 (9%)
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
PSF E +YN + A+ A+ F++++ S E R ++ L G
Sbjct: 7 VPSF-DHELVYNVL----HSAKTSEHALQFFRWVERSNLFEHN---RETHLKIIEIL--G 56
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
+ + +NH RC+ M G+E D MI Y V +++++F +M GV
Sbjct: 57 RASKLNHA-----RCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFDRMEELGV 111
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
SYD L + +GR A+ ++M +G P+ ++N L+ L+G+VE
Sbjct: 112 ERTIK----SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVE 167
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+ +M ++ D +TY T+++ R + EA K E++ +N+ TYT L+
Sbjct: 168 TANRFFEDMKSREISPDVVTYNTMINGYYRVKKMXEAEKYFVEMKGRNIEPTVVTYTTLI 227
>gi|13324802|gb|AAK18850.1|AC082645_20 unknown protein [Oryza sativa Japonica Group]
Length = 825
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
YN I+ F + R+L ++ +F MK + + P I ++N L A + + VY
Sbjct: 227 FYNICIHAFGKWRRLDMSLKLFAAMKTA-SPPLVPDICTHNSLIRALVVGARVADALVVY 285
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
E M + GIEPD+F+ +++ G S ++DALR+F +M Y ++ Y+
Sbjct: 286 DE--------MKSFGIEPDVFTYRAIVDGCCKSFRMDDALRLFQEMRGSYGVKGDAVVYN 337
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GL + A + M G S+ ++N+++ L NG E + +++ K
Sbjct: 338 SLLDGLFKAKKLDEACGFFETMVADGIQCSASTHNTVIDGLFKNGRAEAACRLFYDLRRK 397
Query: 355 QRPVDFITYRTVLDEICRRGRA---GEAMKLLKELQNKNL-IDGYTYTKLL 401
+ +D I Y ++ E C+ G+ EA++L+KE++ + +D T T LL
Sbjct: 398 GQLLDGIAYSIMVREFCKEGKGDQVAEAVELMKEMEERGFAVDLVTVTSLL 448
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 215 NILFTAFLSRGKNTYINHVYMETIRC-LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
N + FL++GK ++ C LF+ G + ++ NS++ ++ ++
Sbjct: 579 NTYMSIFLAKGK---------LSVACKLFEIFTTLGRKGTSYTYNSLMTSFVKKGYLKQV 629
Query: 274 LRIFHQMGVVYNYLPNSF-SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
I H+ G PN +Y+ +I GL G+ + A + E+ +KG YN+L+
Sbjct: 630 WAILHERG--GQLCPNDIATYNLIIQGLGQMGKAEVAGSIISELSKKGVYMDIVMYNTLI 687
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ L G+V+E L ++I + D +T+ T+++ + GR EA K L+++ + +
Sbjct: 688 NQLGKAGKVDEANSLLEQIIGRGIKPDVVTFNTLININAKAGRLKEADKYLRKMIAEGIA 747
Query: 393 DGYTYTKLL 401
Y +L
Sbjct: 748 PNYATETIL 756
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 43/291 (14%)
Query: 156 MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
M++++ Q+ F E ++ +I F+ A RA VF+ + + R C+ +++S N
Sbjct: 1 MEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFR---CKRTVKSVN 57
Query: 216 ILFTAFLSRGKNTYINHVY--------------------------METIRCLFKQMVNDG 249
L A L + + V+ ++ + +F +M G
Sbjct: 58 SLLAALLKNRQLEKMTQVFVDISNYGSPDACTFNILIHAACLCGDLDAVWGVFDEMQKRG 117
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
++P++ + ++I G L++ + +ALR+ M VY PN+ Y LI G C G A
Sbjct: 118 VKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFA 177
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+L +EM S Y++L+SAL +G EE L EM E D +TY +++
Sbjct: 178 FKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIING 237
Query: 370 ICRRGRAGEAMKLLKELQNK---------NLIDGY-----TYTKLLDVLED 406
C+ A +++ E+ K N I G+ K +D+LED
Sbjct: 238 HCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLED 288
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Query: 174 ALYNTII-YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
A+Y+T+I F RK + + + +N C+P +YN + N +
Sbjct: 194 AVYSTLISALFKHGRKEEVSDILREMGENG----CKPDTVTYNAII--------NGHCKE 241
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+E+ + +MV G +PD+FS N++I ++ A+ + M P+ S
Sbjct: 242 NDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPR-RGCPPDVLS 300
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
Y + GLC + K A + DEM KG+VP ++S N LV L
Sbjct: 301 YRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRL 343
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 46/287 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + +Y+E V M + F + YNT++ + ++R++ A+ V
Sbjct: 103 DEYTYNTLITCCRRGSLYEEAAAVFEDM-KSMGFVPDKVTYNTLLDVYGKSRRIKEAIEV 161
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M+ + C PSI +YN L +A+ G +E L QMV GI+ D+F
Sbjct: 162 LREMEVNG---CSPSIVTYNSLISAYARDG--------LLEEAMELKNQMVERGIKLDVF 210
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVV--------YNYL-------------------- 287
+ +M+ G++ + A+R+F +M +N L
Sbjct: 211 TYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEI 270
Query: 288 ------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
P+ +++ L+ G + EMKR GFVP +YN+L+SA + G
Sbjct: 271 KICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSF 330
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
++ + M++ D TY VL + R G ++ K+L E+Q+
Sbjct: 331 DQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQD 377
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 11/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I + AV VFK M+ C+P++ +YN++ + G +
Sbjct: 36 YTSLITACVSNGRYREAVMVFKKMEEEG---CKPTLITYNVILNVYGKMG-------MPW 85
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
I LF+ M N GI PD ++ N++I + +A +F M + ++P+ +Y+
Sbjct: 86 NKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSM-GFVPDKVTYNT 144
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ R K A E+ EM+ G PS +YNSL+SA A +G +EE ++ +M+E+
Sbjct: 145 LLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERG 204
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+D TY +L R G+ AM++ +E++
Sbjct: 205 IKLDVFTYTAMLSGFVRTGKDESAMRVFEEMR 236
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY--- 264
P + +Y L TA +S G+ Y E + +FK+M +G +P + + N ++ Y
Sbjct: 30 EPDVYAYTSLITACVSNGR-------YREAVM-VFKKMEEEGCKPTLITYNVILNVYGKM 81
Query: 265 -ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT-KNARELCDEMKRKGFV 322
+ N + G+ LP+ ++Y+ LI C +G + A + ++MK GFV
Sbjct: 82 GMPWNKITGLFEGMKNAGI----LPDEYTYNTLIT-CCRRGSLYEEAAAVFEDMKSMGFV 136
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P +YN+L+ + ++E ++ L EM +TY +++ R G EAM+L
Sbjct: 137 PDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMEL 196
Query: 383 LKELQNKNL-IDGYTYTKLL 401
++ + + +D +TYT +L
Sbjct: 197 KNQMVERGIKLDVFTYTAML 216
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 54/290 (18%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQM---LATPSFCGTEALYNTIIYFFAEARKLSRA 192
D STY+ + L ++++ + ++ +M + P+ E + ++++ +A +++ R
Sbjct: 348 DLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPN----ELTHCSLLHAYANGKEIGRM 403
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILF-TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
+ + + + C I + +L T L K + +E R F ++ G
Sbjct: 404 LALAEEI-------CSGVIEPHAVLLKTLVLVNSKCDLL----LEAERA-FLELKRKGFS 451
Query: 252 PDIFSLNSMIKGY---ILSNHVNDALRIFHQMG-----VVYNYL---------------- 287
PD+ +LN+MI Y + N+ L + G YN L
Sbjct: 452 PDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEV 511
Query: 288 ----------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
P+ SY+ +I C GR K A + EM+ G +P +YN+ V++ A
Sbjct: 512 LKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAA 571
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ EE + + MI+ + TY +V+D C+ R +A+K + L
Sbjct: 572 DSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFISSLH 621
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 120/291 (41%), Gaps = 35/291 (12%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D T++ + G M E+ V +M F YNT+I ++ +A+ +
Sbjct: 278 DIVTWNTLLAVFGQNGMDSEVSGVFKEM-KRVGFVPERDTYNTLISAYSRCGSFDQAMAM 336
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGK----------------------------N 227
+K M ++ P + +YN + A L+RG +
Sbjct: 337 YKRMLDTG---ITPDLSTYNAVLAA-LARGGLWEQSEKILAEMQDGMCKPNELTHCSLLH 392
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
Y N + + L +++ + IEP L +++ + + +A R F ++ +
Sbjct: 393 AYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKR-KGFS 451
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+ + + +I + E+ + MK GF PS +YNSL+ + + E + +
Sbjct: 452 PDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEV 511
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
L E++ K D I+Y TV+ CR GR EA + E++ LI D TY
Sbjct: 512 LKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITY 562
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+ L +G+ A L + + + GF P +Y SL++A NG E V +M E+
Sbjct: 4 IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63
Query: 356 RPVDFITYRTVLDEICRRGRA-GEAMKLLKELQNKNLI-DGYTYTKLL 401
ITY +L+ + G + L + ++N ++ D YTY L+
Sbjct: 64 CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLI 111
>gi|115489040|ref|NP_001067007.1| Os12g0557800 [Oryza sativa Japonica Group]
gi|113649514|dbj|BAF30026.1| Os12g0557800 [Oryza sativa Japonica Group]
Length = 682
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 132/314 (42%), Gaps = 31/314 (9%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQE--DPLVCLELFNWASK-QPRFRHDASTYHIMT 144
+ +F A+ L PRF L + +PL+C+ L+ WAS+ F D +
Sbjct: 66 NAEFAAALPRLGPRFVVRALRAAAEREGLGEPLLCVRLYVWASRFGAHFARDGG----VR 121
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
R L A + + +++A CG E + +L A Y +
Sbjct: 122 RALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPR 181
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
L RPS Y TA+L F+QM DG PD F+ NS++ G
Sbjct: 182 LGLRPSTAVY----TAYLR------------------FQQMPADGCRPDHFTYNSLVHGV 219
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
V++A+R+ QM PN F+Y L+ G C GR + A + D+MK KG PS
Sbjct: 220 CRRGIVDEAVRLVRQMEG-EGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPS 278
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+Y +LV + E ++ + L + + + + T+L + ++ A EA++ K
Sbjct: 279 EATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEK 338
Query: 385 ELQNKN-LIDGYTY 397
+ + L+D +
Sbjct: 339 RMSARGYLLDSTAF 352
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F +A + +A + K M++ L P++ ++N L + + G +
Sbjct: 422 YNMVIDCFVKAGAVDKAEEIVKEMQDKGFL---PNLVTFNTLISGYSKLGN--------V 470
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + K ++ G PDI + S+I G ++ ++DA F +M + PN+ +Y+
Sbjct: 471 HNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAE-WGVRPNAQTYNV 529
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+H LC+ G A +L ++MK G P + S+N+L+ + +V++ +M+
Sbjct: 530 LMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFG 589
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL 383
D TY +++ +C R +A ++L
Sbjct: 590 VVPDSYTYNSLIKALCDERRVNKAKEIL 617
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
S+ SYN++ F+ G ++ + K+M + G P++ + N++I GY +
Sbjct: 418 SVMSYNMVIDCFVKAGA--------VDKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGN 469
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
V++A ++ +M + + ++P+ ++ LI GLC + +A +EM G P++++YN
Sbjct: 470 VHNA-KVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYN 528
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
L+ L G V + + L +M D ++ ++ CR + +A + ++
Sbjct: 529 VLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIFNDMVRF 588
Query: 390 NLI-DGYTYTKLLDVLEDD 407
++ D YTY L+ L D+
Sbjct: 589 GVVPDSYTYNSLIKALCDE 607
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 15/188 (7%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
VV +ML F + ++I +L A F+ M RP+ ++YN+L
Sbjct: 475 VVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAE---WGVRPNAQTYNVLM 531
Query: 219 TAFLSRGK-NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
S G N I+ L +M DG+ PD +S N++I + V+ A IF
Sbjct: 532 HTLCSAGHVNKAID---------LLNKMKIDGVTPDAYSFNALILSFCRMRKVDKAEDIF 582
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS-SKSYNSLVSALA 336
+ M V + +P+S++Y+ LI LC + R A+E+ +R G S ++SY +V+ALA
Sbjct: 583 NDM-VRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALA 641
Query: 337 LNGEVEET 344
G+ E
Sbjct: 642 KMGQFSEA 649
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 13/211 (6%)
Query: 200 KNSRNLECRPSIRSYNILFTAF---LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
K + E R S R Y + TAF +S E + K N G + I
Sbjct: 331 KEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMV 390
Query: 257 LNSMI--KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ S++ K + +NH + H V+ L + SY+ +I G A E+
Sbjct: 391 IKSLLNCKNFSKANHY-----LGHM--VLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVK 443
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM+ KGF+P+ ++N+L+S + G V L ++E D IT+ +++D +C
Sbjct: 444 EMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTH 503
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +A +E+ + + TY L+ L
Sbjct: 504 QLDDAFVCFEEMAEWGVRPNAQTYNVLMHTL 534
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 114/232 (49%), Gaps = 20/232 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
++ +I + ARK+ A+ ++K + S CR S + L T + I Y
Sbjct: 119 FSALITGWCNARKVDEALKLYKEILTS---SCRLDAVSSSALITGLC---RERRIGEAYE 172
Query: 236 ETIRCLFKQMV--NDGI-EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY--LPNS 290
LF++M DG +PD+ + ++I G+ S ++ A+++ +GV+ +PN
Sbjct: 173 -----LFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKM---LGVMEGRKCVPNV 224
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y L+HGLC G A +L M KG VP+ +Y +L+ L +V+ + E
Sbjct: 225 VTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDE 284
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLL 401
M P D ++Y +LD CR GR EA +L KE+ K+ L D TYT L+
Sbjct: 285 MTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLV 336
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 131/267 (49%), Gaps = 15/267 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+++ L A++ + +V+ +M S Y+T+I F + ++ RA + +
Sbjct: 11 TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + P + +Y + GK M+ + ++M G+EPD F+ +
Sbjct: 71 MVTRDGMA--PDVVTYTSVVDGLCRDGK--------MDRACEMVREMKLKGVEPDKFTFS 120
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I G+ + V++AL+++ ++ + + ++ S LI GLC + R A EL EM+
Sbjct: 121 ALITGWCNARKVDEALKLYKEI-LTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEM 179
Query: 319 K---GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
+ + P +Y +L+ +G +E+ +K L M ++ + +TY ++L +C+ G
Sbjct: 180 REDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD 239
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLL 401
+A+ L + + +K + + TYT L+
Sbjct: 240 LDQALDLFRRMTSKGCVPNVVTYTTLI 266
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 21/267 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFK 197
TY + L AA ++++M AT C + + YN ++ + ++ A +FK
Sbjct: 261 TYTTLIHGLCAAHKVDAARLLMDEMTAT--CCPADTVSYNALLDGYCRLGRIEEAKQLFK 318
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM-VNDGIEPDIFS 256
M C P +Y L F N +E R L + M GI+PD+ +
Sbjct: 319 EMAAK---SCLPDRITYTCLVRGF--------CNASRLEEARFLLENMKTAAGIDPDVVT 367
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
+ ++ GY + +A +M + N PN+ +Y LI GLC GR +A E+ +
Sbjct: 368 YSIVVAGYSRAKRFVEAAEFIQEM-IARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV 426
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
+ P +Y ++ L EE + L EM+ K+ T+ +V+ +CR G
Sbjct: 427 DK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDM 482
Query: 377 GEAMKLLKELQNKNLIDG-YTYTKLLD 402
EA KLL + L G TYT LL+
Sbjct: 483 DEAWKLLVAMAAHGLEPGMVTYTTLLE 509
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 112/230 (48%), Gaps = 16/230 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++++ +A L +A+ +F+ M + C P++ +Y L + K +
Sbjct: 227 YSSLLHGLCKAGDLDQALDLFRRMTSKG---CVPNVVTYTTLIHGLCAAHK--------V 275
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R L +M D S N+++ GY + +A ++F +M + LP+ +Y
Sbjct: 276 DAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAA-KSCLPDRITYTC 334
Query: 296 LIHGLCAQGRTKNARELCDEMKRK-GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ G C R + AR L + MK G P +Y+ +V+ + E + + EMI +
Sbjct: 335 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 394
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
+ +TY +++D +C+ GR AM++LK + +++ TYT +++ L
Sbjct: 395 NVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVV---TYTIVIEGL 441
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++ F A +L A ++ + MK + ++ P + +Y+I+ + SR K ++
Sbjct: 332 YTCLVRGFCNASRLEEARFLLENMKTAAGID--PDVVTYSIVVAGY-SRAKR------FV 382
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E ++M+ + P+ + +S+I G + VN A+ + + P+ +Y
Sbjct: 383 EAAE-FIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK-----PDVVTYTI 436
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC RT+ A L +EM K PS ++NS++ AL G+++E K L M
Sbjct: 437 VIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG 496
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+TY T+L+ R GR A +L + ++ K
Sbjct: 497 LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRK 530
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 19/246 (7%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNT-IIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
A K+Y+E+ S C +A+ ++ +I R++ A +F+ M+ +
Sbjct: 135 ALKLYKEI---------LTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW 185
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + +Y L F G +E + M P++ + +S++ G +
Sbjct: 186 KPDVVTYTALIDGFCKSGN--------LEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKA 237
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++ AL +F +M +PN +Y LIHGLCA + AR L DEM + S
Sbjct: 238 GDLDQALDLFRRM-TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVS 296
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN+L+ G +EE + EM K D ITY ++ C R EA LL+ ++
Sbjct: 297 YNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 356
Query: 388 NKNLID 393
ID
Sbjct: 357 TAAGID 362
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG--IEPDIFSLNSMIKGYIL 266
P+ R+YN++ L + + T + ++ +R DG + PD+ + +++I G+
Sbjct: 7 PNERTYNVVVNG-LCKARLTSKAYEVLKEMR--------DGKSVAPDLVTYSTVINGFCK 57
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++ A I +M P+ +Y ++ GLC G+ A E+ EMK KG P
Sbjct: 58 QGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKF 117
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++++L++ +V+E +K E++ +D ++ ++ +CR R GEA +L +E+
Sbjct: 118 TFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEM 177
Query: 387 QNKNLIDG------YTYTKLLD 402
+ + DG TYT L+D
Sbjct: 178 EMRE--DGAWKPDVVTYTALID 197
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 129/309 (41%), Gaps = 32/309 (10%)
Query: 94 AVSELPPRFNNEEL----CNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGA 149
A S LP R L CN L+E + + A P D TY I+
Sbjct: 322 AKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP----DVVTYSIVVAGYSR 377
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
AK + E + + +M+A + Y+++I +A +++ A+ V K + +P
Sbjct: 378 AKRFVEAAEFIQEMIAR-NVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD-------KP 429
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+ +Y I+ + E L ++MVN +EP + + NS+I
Sbjct: 430 DVVTYTIVIEGLCGTDRT--------EEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGD 481
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS---- 325
+++A ++ M + P +Y L+ G GR + A EL + M+RK SS
Sbjct: 482 MDEAWKLLVAMA-AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANL 540
Query: 326 ---KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
+++++L+ L E+++ + + E+ ++ ++D + R GR EA KL
Sbjct: 541 VPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKL 600
Query: 383 LKELQNKNL 391
+ + L
Sbjct: 601 INSISKVGL 609
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ P+ + N ++ G + + A + +M + P+ +Y +I+G C QG A
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 310 RELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
E+ EM R G P +Y S+V L +G+++ + + EM K D T+ ++
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124
Query: 369 EICRRGRAGEAMKLLKEL 386
C + EA+KL KE+
Sbjct: 125 GWCNARKVDEALKLYKEI 142
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIR-----------------CL---------- 241
P++ +Y+ L AF+ GK ++ E +R CL
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQM 317
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F MV+ G D+ S N++I G+ + V D +++F +M + N+ +Y+ LI G
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGLVSNTVTYNTLIQGFF 376
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G A+E +M G P +YN L+ L NGE+E+ + +M +++ +D +
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
TY TV+ +C+ G+ EA L L K L D TYT ++ L
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P I +YN + + K +N + FK++ GI P++ + +++ G S
Sbjct: 187 KPDIVAYNAIIDSLC---KTKRVNDAFD-----FFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ +DA R+ M + PN +Y L+ G+ A+EL +EM R P +
Sbjct: 239 SRWSDAARLLSDM-IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y+SLV+ L L+ ++E + M+ K D ++Y T+++ C+ R + MKL +E+
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 388 NKNLI-DGYTYTKLL 401
+ L+ + TY L+
Sbjct: 358 QRGLVSNTVTYNTLI 372
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 17/218 (7%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL+ A+ +F M SR PSI +N L +A + K + + L K+M
Sbjct: 65 KLNDAIDLFSDMVKSRPF---PSIVDFNRLLSAIVKLKK--------YDVVISLGKKMEV 113
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI D+++ N +I + V+ AL I +M + Y P+ + L++G C + R
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKM-LKLGYEPDRVTIGSLVNGFCRRNRVS 172
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ--RPVDFITYRT 365
+A L D+M G+ P +YN+++ +L V + + ++ IE++ RP + +TY
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF-DFFKEIERKGIRP-NVVTYTA 230
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+++ +C R +A +LL ++ K + + TY+ LLD
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C + SYN L F + +E LF++M G+ + + N++I+G+
Sbjct: 326 CLADVVSYNTLINGFCKAKR--------VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ V+ A F QM + P+ ++Y+ L+ GLC G + A + ++M+++
Sbjct: 378 AGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y +++ + G+VEE + K D +TY T++ +C +G E L ++
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 387 QNKNLI 392
+ + L+
Sbjct: 497 KQEGLM 502
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 158 DVVNQM--LATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
D NQM L C + + YNT+I F +A+++ + +F+ M + R L + +Y
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLV--SNTVTY 368
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N L F G ++ + F QM GI PDI++ N ++ G + + AL
Sbjct: 369 NTLIQGFFQAGD--------VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
IF M L + +Y +I G+C G+ + A L + KG P +Y +++S
Sbjct: 421 VIFEDMQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 335 LALNGEVEET 344
L G + E
Sbjct: 480 LCTKGLLHEV 489
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 22/263 (8%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA----TPSFCG 171
D L+ FNWA ++ + H +Y M LG + ++ N + + +
Sbjct: 91 DTSKALQFFNWA-QEMGYTHTEQSYFSMLEILGRNR---HLNTARNFLFSIEKRSRGIVK 146
Query: 172 TEA-LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
EA +N+++ F A ++ VF MK+ PS+ ++N L T L RG+
Sbjct: 147 LEARFFNSLMRNFNRAGLFQESIKVFTIMKSH---GVSPSVVTFNSLLTILLKRGRTNMA 203
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
VY E + G+ PD F+ N +I+G+ ++ V+D RIF+ + + P+
Sbjct: 204 KKVYDEMLSTY-------GVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLS-RFGCEPDV 255
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKG--FVPSSKSYNSLVSALALNGEVEETVKNL 348
+Y+ L+ GLC G+ A + M +K P+ +Y +L+ E+E+ +
Sbjct: 256 VTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVF 315
Query: 349 WEMIEKQRPVDFITYRTVLDEIC 371
EM+ + + ITY T++ +C
Sbjct: 316 EEMVNQGLKANNITYNTLIKGLC 338
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 28/258 (10%)
Query: 172 TEALYNTIIYFFAEARKLSRAV-YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
TE Y +++ R L+ A ++F K SR + + R +N L F G
Sbjct: 110 TEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGI-VKLEARFFNSLMRNFNRAG----- 163
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
++ E+I+ +F M + G+ P + + NS++ + N A +++ +M Y P++
Sbjct: 164 --LFQESIK-VFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDT 220
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE---ETVKN 347
F+++ LI G C G + + +++ R G P +YN+LV L G+V VK
Sbjct: 221 FTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKG 280
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN--------------KNLID 393
+ + P + +TY T++ C + +A+ + +E+ N K L +
Sbjct: 281 MGKKSVDLNP-NVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCE 339
Query: 394 GYTYTKLLDVLEDDFGNS 411
+ K+ D+LE G+
Sbjct: 340 ARKFEKIKDILEGTAGDG 357
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 122/267 (45%), Gaps = 20/267 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + + L A+ ++++ D++ +F +NT+++ A L A+ VF+
Sbjct: 329 TYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV-------NDGIE 251
M L+ +P +Y+ L + G + E L +++ DG +
Sbjct: 389 MSE---LKIQPDSATYSALVRSLCQGG--------HYEKAEDLLDKLLERKILLSGDGCK 437
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + + N + K + A + F Q+ + + SY LI G C +G ++ E
Sbjct: 438 PLVAAYNPIFKYLCETGKTKKAEKAFRQL--MRRGTQDPPSYKTLIMGHCKEGTFESGYE 495
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L M RK F+P ++Y SL++ L + +++L +M+ + T+ ++L ++
Sbjct: 496 LLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLL 555
Query: 372 RRGRAGEAMKLLKELQNKNLIDGYTYT 398
+GR E+ L++ + +KN+ +++
Sbjct: 556 EQGRTSESASLIQLMLDKNIRQNLSFS 582
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 132/320 (41%), Gaps = 49/320 (15%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
E F WA +Q ++RH + M L +++ V+ M+ GT + ++
Sbjct: 110 FEFFRWADRQWKYRHAPEVFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQ-FAHLM 168
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
++ A KL A+ V + M+ C P I N+ + G+ ++
Sbjct: 169 LSYSRAGKLRSAMRVLQLMQKD---GCAPDICICNMAVNVLVVAGR--------IDKALE 217
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
++M G++PD+ + N +IKG + + DAL + M + LP+ SY ++ L
Sbjct: 218 FAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSM-LQNGCLPDKISYFTVMSFL 276
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA------------------------ 336
C + R + + L + M G P +YN L+ LA
Sbjct: 277 CKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDE 336
Query: 337 -----------LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
LNG + E + + EMI K D +TY V+D CR G +A K++K
Sbjct: 337 VGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKH 396
Query: 386 L-QNKNLIDGYTYTKLLDVL 404
+ +N + T+T LL+ L
Sbjct: 397 MYKNGCKPNTVTHTALLNGL 416
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 119/266 (44%), Gaps = 17/266 (6%)
Query: 128 SKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEA 186
S+ RFR D Y E +++ +M++ C + + Y+ ++ F
Sbjct: 327 SEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKG--CRPDVVTYSAVVDGFCRI 384
Query: 187 RKLSRAVYVFKYM-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
+L +A + K+M KN C+P+ ++ L GK++ L +
Sbjct: 385 GELDQARKMMKHMYKNG----CKPNTVTHTALLNGLCKVGKSSEAWE--------LLNKS 432
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
+ P + + ++ G+ + ++ + QM + + P + + LIH LC + +
Sbjct: 433 EEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQM-LQKGFFPTTVEINLLIHALCNERK 491
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
+A++ ++ + KG + ++ +++ + G++E + L +M R D +TY
Sbjct: 492 PADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTV 551
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL 391
V+D + R+G+ EA L++++ N+ L
Sbjct: 552 VVDALGRKGKMKEATSLVEKMLNRGL 577
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 114/282 (40%), Gaps = 18/282 (6%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
EL N S++ + A TY ++ +E DVV QML F T N +I+
Sbjct: 427 ELLN-KSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQK-GFFPTTVEINLLIH 484
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
RK + A +M+ ++ C ++ ++ + F +G +E+ L
Sbjct: 485 ALCNERKPADAK---DFMEQCQSKGCFINVVNFTTVIHGFSRQGD--------LESALSL 533
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
M PD+ + ++ + +A + +M + P +Y +IH C
Sbjct: 534 LDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKM-LNRGLHPTPVTYRTVIHRYC 592
Query: 302 AQGRTKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+G ++ L D+M ++GF S +YN ++ L G++ E L +++ D
Sbjct: 593 EKGAVEDLLNLLDKMLAKEGF---SSAYNQVIEKLCAFGKLSEANNLLSKVLRTASKRDA 649
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLD 402
T ++D RG ++ + + +NLI + +D
Sbjct: 650 QTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPDLKLCQKVD 691
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIR-----------------CL---------- 241
P++ +Y+ L AF+ GK ++ E +R CL
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F MV+ G D+ S N++I G+ + V D +++F +M + N+ +Y+ LI G
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGLVSNTVTYNTLIQGFF 376
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G A+E +M G P +YN L+ L NGE+E+ + +M +++ +D +
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
TY TV+ +C+ G+ EA L L K L D TYT ++ L
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P I +YN + + K +N + FK++ GI P++ + +++ G S
Sbjct: 187 KPDIVAYNAIIDSLC---KTKRVNDAFD-----FFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ +DA R+ M + PN +Y L+ G+ A+EL +EM R P +
Sbjct: 239 SRWSDAARLLSDM-IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y+SL++ L L+ ++E + M+ K D ++Y T+++ C+ R + MKL +E+
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 388 NKNLI-DGYTYTKLL 401
+ L+ + TY L+
Sbjct: 358 QRGLVSNTVTYNTLI 372
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 17/218 (7%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL+ A+ +F M SR PSI +N L +A + K + + L K+M
Sbjct: 65 KLNDAIDLFSDMVKSRPF---PSIVDFNRLLSAIVKLKK--------YDVVISLGKKMEV 113
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI D+++ N +I + V+ AL I +M + Y P+ + L++G C + R
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKM-LKLGYEPDRVTIGSLVNGFCRRNRVS 172
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ--RPVDFITYRT 365
+A L D+M G+ P +YN+++ +L V + + ++ IE++ RP + +TY
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF-DFFKEIERKGIRP-NVVTYTA 230
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+++ +C R +A +LL ++ K + + TY+ LLD
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C + SYN L F + +E LF++M G+ + + N++I+G+
Sbjct: 326 CLADVVSYNTLINGFCKAKR--------VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ V+ A F QM + P+ ++Y+ L+ GLC G + A + ++M+++
Sbjct: 378 AGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y +++ + G+VEE + K D +TY T++ +C +G E L ++
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 387 QNKNLI 392
+ + L+
Sbjct: 497 KQEGLM 502
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 158 DVVNQM--LATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
D NQM L C + + YNT+I F +A+++ + +F+ M + R L + +Y
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLV--SNTVTY 368
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N L F G ++ + F QM GI PDI++ N ++ G + + AL
Sbjct: 369 NTLIQGFFQAGD--------VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
IF M L + +Y +I G+C G+ + A L + KG P +Y +++S
Sbjct: 421 VIFEDMQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 335 LALNGEVEET 344
L G + E
Sbjct: 480 LCTKGLLHEV 489
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 139/289 (48%), Gaps = 21/289 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD--DVVNQMLATPSFCGTEALYNT 178
LELF+ K +A+TY + K Y +MD D Q+L S C ++ + T
Sbjct: 90 LELFHEMEKNFALVPEATTYTAII------KCYCKMDRLDQARQLLEESSCCSSDVIAIT 143
Query: 179 -IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
+ F +A+++ A + M ++ +P I ++N++ F G+ + Y
Sbjct: 144 SVARGFCKAQRVDEAYQLLLDMVEKKSA--KPDIVAWNVIIHGFCKAGR---VREAYE-- 196
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYL 296
+ + +V+ G P+ + ++I G+ S ++++AL++F + ++ PN +++ L
Sbjct: 197 ---MLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNAL 253
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GLC R ++A EL +MK + + +Y +L+ L G E + EM+ +
Sbjct: 254 ISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGC 313
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+TY T++ C+ G +A ++++ + K + D TYT LL+ L
Sbjct: 314 NPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGL 362
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 18/236 (7%)
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
YQ + D+V + A P +N II+ F +A ++ A ++ ++ ++ C P+
Sbjct: 159 YQLLLDMVEKKSAKPDIVA----WNVIIHGFCKAGRVREA---YEMLETLVSMGCVPNAV 211
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV--NDGIEPDIFSLNSMIKGYILSNHV 270
+Y L F G + E ++ LFK + + EP++ + N++I G ++ +
Sbjct: 212 TYTTLIDGFCKSGNLS-------EALQ-LFKVLSSRDHHAEPNVVTFNALISGLCKADRL 263
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
A + QM + ++F+Y L+ GLC QGRT + +EM R+G PS +Y +
Sbjct: 264 EHAFELVKQMKA-RDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTT 322
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
LV A G +++ + + M+ K P D TY +L+ + G+ A + +++
Sbjct: 323 LVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKI 378
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 136/296 (45%), Gaps = 38/296 (12%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T+ ++ L A E + NQML + N ++ +A + +A+ +F
Sbjct: 5 TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDI-NLLLASLCQAGTMDQAMAIF-- 61
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSR---GKNTYINH-------------VYMETIRCLF 242
R ++C PS+ + NIL F K + H Y I+C
Sbjct: 62 ----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 243 K--------QMVNDG--IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
K Q++ + D+ ++ S+ +G+ + V++A ++ M + P+ +
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
++ +IHG C GR + A E+ + + G VP++ +Y +L+ +G + E ++ L++++
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQ-LFKVL 236
Query: 353 ---EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ + +T+ ++ +C+ R A +L+K+++ ++L D +TYT L+D L
Sbjct: 237 SSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 16/257 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G + EM + + M P+ Y T+I F ++ LS A+ +FK + +SR+
Sbjct: 187 KAGRVREAYEMLETLVSMGCVPN----AVTYTTLIDGFCKSGNLSEALQLFKVL-SSRDH 241
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P++ ++N L + K + H + L KQM + D F+ +++ G
Sbjct: 242 HAEPNVVTFNALISGLC---KADRLEHAFE-----LVKQMKARDLRADTFTYTTLMDGLC 293
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
++ R+F +M + P+ +Y L+H C G ++A+++ M KG P
Sbjct: 294 KQGRTSEVSRVFEEM-LREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDV 352
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMKLLK 384
+Y L+ L NG+V T +E I ++R P + Y ++ C+ EA+K
Sbjct: 353 TTYTVLLEGLFENGKV-RTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYV 411
Query: 385 ELQNKNLIDGYTYTKLL 401
E+ ++ L KLL
Sbjct: 412 EMLDRRLAPDPATCKLL 428
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I +A +L A + K MK +R+L R +Y L +G+ + ++ V
Sbjct: 250 FNALISGLCKADRLEHAFELVKQMK-ARDL--RADTFTYTTLMDGLCKQGRTSEVSRV-- 304
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F++M+ +G P + + +++ + + + DA ++ M V P+ +Y
Sbjct: 305 ------FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSM-VAKGIPPDVTTYTV 357
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GL G+ + A E +++ R+ P + Y++LV V+E VK EM++++
Sbjct: 358 LLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417
Query: 356 RPVDFITYRTVLDEICRRGR 375
D T + +++ +C+RGR
Sbjct: 418 LAPDPATCKLLVEMLCKRGR 437
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN F++ LI GLC GR A E ++M + VP+ + N L+++L G +++ +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMA- 59
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NKNLI-DGYTYTKLL 401
++ I+ V IT +++ C +A++L E++ N L+ + TYT ++
Sbjct: 60 IFRGIQCSPSV--ITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAII 113
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I +A+ + +AV + ++M + + P R+YNI+ + S G+
Sbjct: 238 YNSLIDGLCKAQAMDKAVAILQHMFDKGVM---PDTRTYNIMIRGYCSLGQ-------LE 287
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +R L K+M G++PD+ + + +I+ Y +A +F M V PNS Y
Sbjct: 288 EAVR-LLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSM-VRKGQKPNSTIYHI 345
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+HG +G + R+L D M R G +++N L+ A A +G V++ + EM +
Sbjct: 346 LLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG 405
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D ++Y TV+ +C+ GR +A+ ++ ++ L
Sbjct: 406 LRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 25/278 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+IM R + +E ++ +M + Y+ +I ++ + + + A V
Sbjct: 269 DTRTYNIMIRGYCSLGQLEEAVRLLKKM-SGSGLQPDVVTYSLLIQYYCKIGRCAEARSV 327
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M +P+ Y+IL + ++G + +R L M+ DGI +
Sbjct: 328 FDSMVRKGQ---KPNSTIYHILLHGYATKGA--------LIDVRDLLDLMIRDGIPFEHR 376
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N +I Y V+ A+ F +M N L P+ SY +IH LC GR ++A +
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMR--QNGLRPDVVSYSTVIHILCKTGRVEDAVYHFN 434
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M +G P+ S+ SL+ L GE ++ + +EMI + D I T++D +C+ G
Sbjct: 435 QMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEG 494
Query: 375 RAGEAMKLLKELQN----------KNLIDGYTYTKLLD 402
R EA + + LIDGY + +D
Sbjct: 495 RVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMD 532
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV--VYNYLPNSFSYDYLIH 298
+F++M G PD+FS N++IKG + +AL + M YN PN SY+ +I
Sbjct: 149 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVID 208
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G +G A L EM +G P +YNSL+ L +++ V L M +K
Sbjct: 209 GFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMP 268
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D TY ++ C G+ EA++LLK++ L D TY+ L+
Sbjct: 269 DTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLI 312
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+LN +IKG N +DA+ + + Y P+ FSY+ LI GLC + +++ A EL
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187
Query: 316 MKRKGFV---PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
M G P+ SYN+++ GEV++ EM+ + P D +TY +++D +C+
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+A+ +L+ + +K ++ D TY ++
Sbjct: 248 AQAMDKAVAILQHMFDKGVMPDTRTYNIMI 277
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 118/258 (45%), Gaps = 13/258 (5%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ +++ YHI+ ++ D+++ M+ A +N +I +A+ + +A+
Sbjct: 337 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA-FNILICAYAKHGAVDKAM 395
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
F M+ + RP + SY+ + G+ +E F QMV++G+ P+
Sbjct: 396 TAFTEMRQN---GLRPDVVSYSTVIHILCKTGR--------VEDAVYHFNQMVSEGLSPN 444
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
I S S+I G + +M + P++ + ++ LC +GR A++
Sbjct: 445 IISFTSLIHGLCSIGEWKKVEELAFEM-INRGIHPDAIFMNTIMDNLCKEGRVVEAQDFF 503
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
D + G P SYN+L+ G+++E++K L M+ D TY ++L+ +
Sbjct: 504 DMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKN 563
Query: 374 GRAGEAMKLLKELQNKNL 391
GR +A+ L +E+ K++
Sbjct: 564 GRVEDALALYREMFRKDV 581
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 122/257 (47%), Gaps = 32/257 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG---------- 225
Y+T+I+ + ++ AVY F M S L P+I S+ L S G
Sbjct: 413 YSTVIHILCKTGRVEDAVYHFNQMV-SEGLS--PNIISFTSLIHGLCSIGEWKKVEELAF 469
Query: 226 ----KNTYINHVYMETI-------------RCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ + + ++M TI + F +++ G++PD+ S N++I GY
Sbjct: 470 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVG 529
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++++++ +M V P+S++Y+ L++G GR ++A L EM RK + +
Sbjct: 530 KMDESIKQLDRM-VSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITS 588
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N ++ L G + + +M+++ + TY TVL +C EA+++ ++L++
Sbjct: 589 NIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 648
Query: 389 KNL-IDGYTYTKLLDVL 404
K +D T++ +++ L
Sbjct: 649 KEFELDVRTFSIVINAL 665
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG--IEPDIFSLNSMIKGYIL 266
P + SYN L K+ E + L + G P++ S N++I G+
Sbjct: 160 PDVFSYNALIKGLCVEKKSQ-------EALELLIHMTADGGYNCSPNVVSYNTVIDGFFK 212
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V+ A +FH+M + P+ +Y+ LI GLC A + M KG +P ++
Sbjct: 213 EGEVDKAYFLFHEM-MGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTR 271
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN ++ G++EE V+ L +M D +TY ++ C+ GR EA + +
Sbjct: 272 TYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSM 331
Query: 387 QNKN----------LIDGY-TYTKLLDV 403
K L+ GY T L+DV
Sbjct: 332 VRKGQKPNSTIYHILLHGYATKGALIDV 359
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 10/215 (4%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K R V + ++ +P + SYN L + GK E+I+ L +MV+
Sbjct: 492 KEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMD-------ESIKQL-DRMVS 543
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G+ PD ++ NS++ GY + V DAL ++ +M + + + + ++HGL GR
Sbjct: 544 IGLRPDSWTYNSLLNGYFKNGRVEDALALYREM-FRKDVKFCAITSNIMLHGLFQAGRIV 602
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
AREL +M +G ++YN+++ L N V+E ++ ++ K+ +D T+ V+
Sbjct: 603 AARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVI 662
Query: 368 DEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ + + GR EA L + + + D TY+ ++
Sbjct: 663 NALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMI 697
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 110/274 (40%), Gaps = 37/274 (13%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G Q+ D+V + P YNT+I + K+ ++ K + ++
Sbjct: 492 KEGRVVEAQDFFDMVIHIGVKPDVVS----YNTLIDGYCFVGKMDESI---KQLDRMVSI 544
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR-----C-------------------- 240
RP +YN L + G+ +Y E R C
Sbjct: 545 GLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAA 604
Query: 241 --LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
L+ +MV+ G + I + N+++ G ++ V++ALR+F + + + ++ +I+
Sbjct: 605 RELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS-KEFELDVRTFSIVIN 663
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR-P 357
L GR A+ L M +G VP +Y+ ++ + G +EE+ NL+ +EK
Sbjct: 664 ALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEES-DNLFLSMEKNGCA 722
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D ++ + +G A L ++ KN
Sbjct: 723 ADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNF 756
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 144/341 (42%), Gaps = 39/341 (11%)
Query: 82 SKPALDDT---QFRCAVSELPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRFRHDA 137
+ P +D++ F AV++ P F L V+ +++ PL L F W KQP F
Sbjct: 32 TNPQIDNSVNPHFHSAVTQ--PEF----LLRVLNSVKHRPLTALRFFRWVEKQPNFHRSE 85
Query: 138 STY----HIMTRKLGAAKMYQEMDDVVNQMLATPSF-------CGTEA-----LYNTIIY 181
+ + I+ + Y M+ + + CG + L + +I
Sbjct: 86 TAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQ 145
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
FA+ L + + VF M N+ L P +R+ N + + + VY I+C
Sbjct: 146 VFAKKLILEKCLMVFYKMVNNGLL---PDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKC- 201
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
I P I + N+M+ V A+ + M + + PN SY+ L++GL
Sbjct: 202 -------QIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRM-FGCDPNDVSYNVLVNGLS 253
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+G A+EL ++M G S+ +YN L+ EE EM+ + +
Sbjct: 254 GKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVV 313
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
TY T++ +CR GR +A + L + N++L+ D +Y L+
Sbjct: 314 TYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLI 354
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 31/243 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG--------KN 227
YNT+IY ++ + A+ +F ++ S+NL PS+ +YN L G K+
Sbjct: 350 YNTLIYGYSRLGNFAEALLLFSELR-SKNL--VPSVVTYNTLIDGGCRTGNLDIAKGMKD 406
Query: 228 TYINH-----VYMETI--------------RCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
I H V TI + LF +M++ G++PD + + I G +
Sbjct: 407 DMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLG 466
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ + A + +M + P+ +Y+ LI+GLC G +A EL +M+ +G VP +Y
Sbjct: 467 NPSKAFGMKEEMKA-EGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTY 525
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
S++ A ++G + + + +M++K +TY ++ RGR A K E+Q+
Sbjct: 526 TSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQD 585
Query: 389 KNL 391
K +
Sbjct: 586 KGV 588
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 13/223 (5%)
Query: 152 MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
M E+++V + M+ T +NT++ + ++ RAV V M R C P+
Sbjct: 187 MVNEVEEVYSVMIKC-QIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVM---RMFGCDPND 242
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
SYN+L +G+ + + L +QM G++ + N +I+G+
Sbjct: 243 VSYNVLVNGLSGKGE--------FDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFE 294
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
+A + +M + LP +Y+ +++ LC GR +AR D M + +P SYN+L
Sbjct: 295 EANDLRREM-LGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTL 353
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+ + G E + E+ K +TY T++D CR G
Sbjct: 354 IYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTG 396
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHG 299
++M +G PD+ + N +I G + +DA + +M G+V P+ +Y +IH
Sbjct: 476 EEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIV----PDHVTYTSIIHA 531
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
G + A E+ +M +KG PS +Y L+ + A+ G ++ K EM +K +
Sbjct: 532 HLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
ITY ++ +C+ A L E+++K + + YTYT L++
Sbjct: 592 VITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 127/303 (41%), Gaps = 57/303 (18%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRAVYV 195
+Y+++ L + +++ QM S G + YN +I F + A +
Sbjct: 244 SYNVLVNGLSGKGEFDRAKELIEQM----SMLGLKVSAHTYNPLIRGFCKKEMFEEANDL 299
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M L P++ +YN + + G+ + R MVN+ + PD+
Sbjct: 300 RREMLGRGAL---PTVVTYNTIMYSLCRLGR--------VSDARRYLDVMVNEDLMPDLV 348
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI------------------ 297
S N++I GY + +AL +F ++ N +P+ +Y+ LI
Sbjct: 349 SYNTLIYGYSRLGNFAEALLLFSELRS-KNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDD 407
Query: 298 ---HGLCAQ--------------GRTKNARELCDEMKRKGFVPSSKSYNS-LVSALALNG 339
HGLC G A+EL DEM +G P +Y + +V L L G
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKL-G 466
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYT 398
+ EM + P D ITY +++ +C+ G +A +L+++++ + ++ D TYT
Sbjct: 467 NPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYT 526
Query: 399 KLL 401
++
Sbjct: 527 SII 529
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 22/278 (7%)
Query: 136 DASTYHIMTR---KLGAAKMYQEM-DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D T+ I+ R ++G M +E+ D+++++ L T + + KL
Sbjct: 416 DVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGEL--------KLGN 467
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
F + + P + +YN+L G N L ++M +GI
Sbjct: 468 PSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANE--------LVQKMRLEGIV 519
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
PD + S+I +++S + A +F M + P+ +Y LIH +GR A++
Sbjct: 520 PDHVTYTSIIHAHLISGLLRKAEEVFSDM-LKKGIHPSVVTYTVLIHSYAVRGRLDFAKK 578
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
DEM+ KG P+ +YN+L+ L ++ EM K + TY +++E
Sbjct: 579 YFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENS 638
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDF 408
+A+KL K++ ++ + D T++ L+ L D+
Sbjct: 639 NLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDY 676
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K+ R K+ K+ + S+ +YNI+ G +E R LF QM
Sbjct: 33 KVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGD--------LEMARSLFTQMKE 84
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G PDI + NS+I G+ +++ + IF QM + P+ +Y+ LI+ C R
Sbjct: 85 AGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA-DCDPDVITYNALINCFCKFERMP 143
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A E EMK G P+ +Y++ + A G ++E +K +M + TY +++
Sbjct: 144 KAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLI 203
Query: 368 DEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLDVL 404
D C+ G EA+KL++E LQ ++ TYT LLD L
Sbjct: 204 DANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 22/279 (7%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEAR 187
K+ F D TY+ + G + E + QM + C + + YN +I F +
Sbjct: 83 KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM--KDADCDPDVITYNALINCFCKFE 140
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
++ +A F+++ + +P++ +Y+ AF G + E I+ F M
Sbjct: 141 RMPKA---FEFLHEMKANGLKPNVVTYSTFIDAFCKEG-------MLQEAIK-FFVDMRR 189
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFH---QMGVVYNYLPNSFSYDYLIHGLCAQG 304
+ P+ F+ S+I + ++ +AL++ Q G+ N + +Y L+ GLC +G
Sbjct: 190 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV----TYTALLDGLCEEG 245
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
R K A E+ M G P+ ++Y +LV E+E L EM EK D + Y
Sbjct: 246 RMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYG 305
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
T+L +C R EA L+ E++ + + YT L+D
Sbjct: 306 TILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMD 344
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 114/290 (39%), Gaps = 36/290 (12%)
Query: 130 QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL 189
Q + + TY + L +E ++V ML + Y +++ F +A+++
Sbjct: 224 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML-NAGVAPNQETYTALVHGFIKAKEM 282
Query: 190 SRAVYVFKYMKNSRNLEC-RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
A + K MK +C +P + Y + N +E + L ++
Sbjct: 283 EYAKDILKEMKE----KCIKPDLLLYGTILWGL--------CNESRLEEAKLLIGEIKES 330
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-----GVVYN-----------------Y 286
GI + +++ Y S +AL + +M G+ N
Sbjct: 331 GINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGM 390
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+P+ +Y LI G G + A L D M G +Y +L+ L+ +G+V++
Sbjct: 391 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARN 450
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
L EMI K D + Y ++ + G+ EA++L E+ + +I G +
Sbjct: 451 LLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLS 500
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+ P S + L+H L GR +R+ +M G S +YN ++ L G++E
Sbjct: 15 FRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEM 74
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+M E D +TY +++D + G E + + +++++ + D TY L++
Sbjct: 75 ARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALIN 134
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 103/196 (52%), Gaps = 10/196 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + +Y++L K M+ F +M+ G+ P+ + ++I G+ +
Sbjct: 209 QPDVYTYSVLINGLCKESK--------MDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKN 260
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V+ A I+ QM + + LP+ +Y+ LI+GLC +G K A +L D+M KG P +
Sbjct: 261 GRVDLAKEIYKQM-LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKIT 319
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E+
Sbjct: 320 YTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREML 379
Query: 388 NKNL-IDGYTYTKLLD 402
+ L D TYT +++
Sbjct: 380 SVRLKPDTGTYTMIIN 395
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 52/227 (22%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 107 FDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGD--------I 158
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + G+ P + S N+++ GYI +++ R+ M + P+ ++Y
Sbjct: 159 RVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVM-LASGVQPDVYTYSV 217
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A E DEM KG VP NG
Sbjct: 218 LINGLCKESKMDDANEXFDEMLVKGLVP--------------NG---------------- 247
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+T+ T++D C+ GR A ++ K++ +++L+ D TY L+
Sbjct: 248 -----VTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLI 289
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 94/233 (40%), Gaps = 13/233 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY ++ L + ++ ++ML + T+I + ++ A +
Sbjct: 211 DVYTYSVLINGLCKESKMDDANEXFDEMLV-KGLVPNGVTFTTLIDGHCKNGRVDLAKEI 269
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+K M + L P + +YN L +G ++ L M G++PD
Sbjct: 270 YKQMLSQSLL---PDLITYNTLIYGLCKKGD--------LKQAHDLIDDMSMKGLKPDKI 318
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ ++I G ++ A +M + N + Y LI GLC +GR+ +A ++ E
Sbjct: 319 TYTTLIBGCCKEGDLDSAFEHRKRM-IQENIRLDDVVYTALISGLCQEGRSVDAEKMLRE 377
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
M P + +Y +++ G+V + K L EM +TY +++
Sbjct: 378 MLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 430
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIF-----HQMGVVYN---------------------- 285
DI+ + +I Y+ S + DA+ + H++ V ++
Sbjct: 71 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFY 130
Query: 286 -------YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
Y + + ++ L+H C G + A+ + D + + G PS S N+L++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRL 190
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
G+++E + M+ D TY +++ +C+ + +A + E+ K L+ +G T+
Sbjct: 191 GDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTF 250
Query: 398 TKLLD 402
T L+D
Sbjct: 251 TTLID 255
>gi|108710734|gb|ABF98529.1| expressed protein [Oryza sativa Japonica Group]
gi|125545490|gb|EAY91629.1| hypothetical protein OsI_13265 [Oryza sativa Indica Group]
Length = 771
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
YN I+ F + R+L ++ +F MK + + P I ++N L A + + VY
Sbjct: 227 FYNICIHAFGKWRRLDMSLKLFAAMKTA-SPPLVPDICTHNSLIRALVVGARVADALVVY 285
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
E M + GIEPD+F+ +++ G S ++DALR+F +M Y ++ Y+
Sbjct: 286 DE--------MKSFGIEPDVFTYRAIVDGCCKSFRMDDALRLFQEMRGSYGVKGDAVVYN 337
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GL + A + M G S+ ++N+++ L NG E + +++ K
Sbjct: 338 SLLDGLFKAKKLDEACGFFETMVADGIQCSASTHNTVIDGLFKNGRAEAACRLFYDLRRK 397
Query: 355 QRPVDFITYRTVLDEICRRGRA---GEAMKLLKELQNKNL-IDGYTYTKLL 401
+ +D I Y ++ E C+ G+ EA++L+KE++ + +D T T LL
Sbjct: 398 GQLLDGIAYSIMVREFCKEGKGDQVAEAVELMKEMEERGFAVDLVTVTSLL 448
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 215 NILFTAFLSRGKNTYINHVYMETIRC-LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
N + FL++GK ++ C LF+ G + ++ NS++ ++ ++
Sbjct: 579 NTYMSIFLAKGK---------LSVACKLFEIFTTLGRKGTSYTYNSLMTSFVKKGYLKQV 629
Query: 274 LRIFHQMGVVYNYLPNSF-SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
I H+ G PN +Y+ +I GL G+ + A + E+ +KG YN+L+
Sbjct: 630 WAILHERG--GQLCPNDIATYNLIIQGLGQMGKAEVAGSIISELSKKGVYMDIVMYNTLI 687
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ L G+V+E L ++I + D +T+ T+++ + GR EA K L+++ + +
Sbjct: 688 NQLGKAGKVDEANSLLEQIIGRGIKPDVVTFNTLININAKAGRLKEADKYLRKMIAEGIA 747
Query: 393 DGYTYTKLLDVLEDDF 408
Y +L L+ +
Sbjct: 748 PNYATETILVFLDKEI 763
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 134/306 (43%), Gaps = 43/306 (14%)
Query: 112 TLQEDP--LVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
L+ +P L L+ F + + F+H TYH+M KLG + +++QM
Sbjct: 46 ALRREPNVLYALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIP 105
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
C ++ + ++ + + RA+ +F +K C+P+++ YN L A L N +
Sbjct: 106 CSQDS-FICVLNSYKNSGLGDRALKMFYRIKE---FGCKPTVKIYNHLLDALLGESGNKF 161
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------G 281
I +++ M +G+EP++F+ N ++K + ++ A ++ +M G
Sbjct: 162 ------HMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDG 215
Query: 282 VVYNYLPNSFSYD-----------------------YLIHGLCAQGRTKNARELCDEMKR 318
V Y + + D LI GLC +GR L DEM
Sbjct: 216 VSYTTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVG 275
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G P+ SY+S++S L+ GEVE + L +MI + + T+ +++ GR GE
Sbjct: 276 NGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGE 335
Query: 379 AMKLLK 384
+ L +
Sbjct: 336 GVGLWR 341
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YNT++ + L+ AV V M+ ++ CRP++ +Y+ L F+ G + V
Sbjct: 353 VVYNTLLNGLCCSGNLAEAVDVCGRME--KDCFCRPNVTTYSTLVHGFVKAGDLQGASEV 410
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ +MVN G+ P++ SM+ ++ + A R+ M P ++
Sbjct: 411 W--------NKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMAT-DGCPPTVVTF 461
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ I GLC GR A + D+M+R G +P +++YN L+ L E++E + + E+ E
Sbjct: 462 NTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEE 521
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++ ++ +TY TV+ G+ +++L +
Sbjct: 522 RKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRM 554
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 110/230 (47%), Gaps = 12/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++I + ++ ++ A+ V M CRP++ +++ L + G+
Sbjct: 285 YSSVISWLSDVGEVELALAVLGKMIRR---GCRPNVHTFSSLMKGYFLGGR-------VG 334
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L++ MV +G+ P++ N+++ G S ++ +A+ + +M PN +Y
Sbjct: 335 EGVG-LWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYST 393
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+HG G + A E+ ++M G P+ Y S+V L N ++ + + M
Sbjct: 394 LVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDG 453
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
P +T+ T + +C GR AM+++ ++Q L D TY +LLD L
Sbjct: 454 CPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGL 503
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ +L A + + ++ R +E ++ +YN + F S GK ++ V
Sbjct: 496 YNELLDGLFSVNELKEACELIRELE-ERKVEL--NLVTYNTVMYGFSSHGKEEWVLQV-- 550
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+M+ +G++PD ++N +I Y V A++ ++ P+ ++
Sbjct: 551 ------LGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTS 604
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
L+ G+C + A ++M KG P+ +++ LV
Sbjct: 605 LLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGF 644
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 139/289 (48%), Gaps = 21/289 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD--DVVNQMLATPSFCGTEALYNT 178
LELF+ K +A+TY + K Y +MD D Q+L S C ++ + T
Sbjct: 90 LELFHEMEKNFALVPEATTYTAII------KCYCKMDRLDQARQLLEESSCCSSDVIAIT 143
Query: 179 -IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
+ F +A+++ A + M ++ +P I ++N++ F G+ + Y
Sbjct: 144 SVARGFCKAQRVDEAYQLLLDMVEKKSA--KPDIVAWNVIIHGFCKAGR---VREAYE-- 196
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYL 296
+ + +V+ G P+ + ++I G+ S ++++AL++F + ++ PN +++ L
Sbjct: 197 ---MLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNAL 253
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GLC R ++A EL +MK + + +Y +L+ L G E + EM+ +
Sbjct: 254 ISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGC 313
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+TY T++ C+ G +A ++++ + K + D TYT LL+ L
Sbjct: 314 NPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGL 362
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 18/236 (7%)
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
YQ + D+V + A P +N II+ F +A ++ A ++ ++ ++ C P+
Sbjct: 159 YQLLLDMVEKKSAKPDIVA----WNVIIHGFCKAGRVREA---YEMLETLVSMGCVPNAV 211
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV--NDGIEPDIFSLNSMIKGYILSNHV 270
+Y L F G + E ++ LFK + + EP++ + N++I G ++ +
Sbjct: 212 TYTTLIDGFCKSGNLS-------EALQ-LFKVLSSRDHHAEPNVVTFNALISGLCKADRL 263
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
A + QM + ++F+Y L+ GLC QGRT + +EM R+G PS +Y +
Sbjct: 264 EHAFELVKQMKA-RDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTT 322
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
LV A G +++ + + M+ K P D TY +L+ + G+ A + +++
Sbjct: 323 LVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKI 378
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 137/296 (46%), Gaps = 38/296 (12%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T+ ++ L A E + NQML + N ++ +A K+ +A+ +F
Sbjct: 5 TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDI-NLLLASLCQAGKMDQAMAIF-- 61
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSR---GKNTYINH-------------VYMETIRCLF 242
R ++C PS+ + NIL F K + H Y I+C
Sbjct: 62 ----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 243 K--------QMVNDG--IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
K Q++ + D+ ++ S+ +G+ + V++A ++ M + P+ +
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
++ +IHG C GR + A E+ + + G VP++ +Y +L+ +G + E ++ L++++
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQ-LFKVL 236
Query: 353 ---EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ + +T+ ++ +C+ R A +L+K+++ ++L D +TYT L+D L
Sbjct: 237 SSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 16/257 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G + EM + + M P+ Y T+I F ++ LS A+ +FK + +SR+
Sbjct: 187 KAGRVREAYEMLETLVSMGCVPN----AVTYTTLIDGFCKSGNLSEALQLFKVL-SSRDH 241
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P++ ++N L + K + H + L KQM + D F+ +++ G
Sbjct: 242 HAEPNVVTFNALISGLC---KADRLEHAFE-----LVKQMKARDLRADTFTYTTLMDGLC 293
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
++ R+F +M + P+ +Y L+H C G ++A+++ M KG P
Sbjct: 294 KQGRTSEVSRVFEEM-LREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDV 352
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMKLLK 384
+Y L+ L NG+V T +E I ++R P + Y ++ C+ EA+K
Sbjct: 353 TTYTVLLEGLFENGKV-RTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYV 411
Query: 385 ELQNKNLIDGYTYTKLL 401
E+ ++ L KLL
Sbjct: 412 EMLDRRLAPDPATCKLL 428
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I +A +L A + K MK +R+L R +Y L +G+ + ++ V
Sbjct: 250 FNALISGLCKADRLEHAFELVKQMK-ARDL--RADTFTYTTLMDGLCKQGRTSEVSRV-- 304
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F++M+ +G P + + +++ + + + DA ++ M V P+ +Y
Sbjct: 305 ------FEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSM-VAKGIPPDVTTYTV 357
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GL G+ + A E +++ R+ P + Y++LV V+E VK EM++++
Sbjct: 358 LLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417
Query: 356 RPVDFITYRTVLDEICRRGR 375
D T + +++ +C+RGR
Sbjct: 418 LAPDPATCKLLVEMLCKRGR 437
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN F++ LI GLC GR A E ++M + VP+ + N L+++L G++++ +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMA- 59
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NKNLI-DGYTYTKLL 401
++ I+ V IT +++ C +A++L E++ N L+ + TYT ++
Sbjct: 60 IFRGIQCSPSV--ITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAII 113
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 134/315 (42%), Gaps = 42/315 (13%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
F WA + P F H +YHI+ LG +K + + D + + F T ++ +
Sbjct: 88 FFLWAKRIPDFEHSLESYHILVEILGCSKQFALLWDFLIEAREYNYFEITSKVFWIVFRA 147
Query: 183 FAEARKLSRAVYVF--------------------------------KYMKNSRNLECRPS 210
++ A S A F ++ ++ PS
Sbjct: 148 YSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPS 207
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
++Y+IL + +R ++ R +F +M+ + D+ + N+++ S V
Sbjct: 208 AKTYSILVRGW-ARIRDA-------SGARKVFDEMLENNCVVDLLAYNALLDALCKSGDV 259
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ A ++F +MG + P+++S+ IH C +A ++ D MKR VP+ ++N
Sbjct: 260 DGAYKMFQEMGNL-GLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNH 318
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNK 389
++ L N +V++ L EMI+K D TY +++ C A KLL + + K
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Query: 390 NLIDGYTYTKLLDVL 404
L D +TY +L +L
Sbjct: 379 CLPDRHTYNMVLKLL 393
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ ++ +A R S A VF M + C + +YN L A G ++ Y
Sbjct: 211 YSILVRGWARIRDASGARKVFDEMLEN---NCVVDLLAYNALLDALCKSGD---VDGAYK 264
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+F++M N G++PD +S I Y ++ V+ A ++ +M Y+ +PN +++++
Sbjct: 265 -----MFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKR-YDLVPNVYTFNH 318
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC + +A L DEM +KG P + +YNS+++ + EV K L M +
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLL 401
D TY VL + R GR ++ + + + TYT ++
Sbjct: 379 CLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATYTVMI 425
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 136/292 (46%), Gaps = 31/292 (10%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT---PSFCGTEALYNTIIYFFAE 185
KQ D TY + LG ++++ + +M+ P C +N++I +
Sbjct: 240 KQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVC----TFNSVIDGLCK 295
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
K+ A + YM + +E P+ +YN++ + RG+ M R +F M
Sbjct: 296 EGKVEDAEEIMTYMI-EKGVE--PNEITYNVVMDGYCLRGQ--------MGRARRIFDSM 344
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLCAQG 304
++ GIEPDI S ++I GY+ ++ A+++F + + N L P+ + L+ GL G
Sbjct: 345 IDKGIEPDIISYTALINGYVEKKKMDKAMQLFRE--ISQNGLKPSIVTCSVLLRGLFEVG 402
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
RT+ A+ DEM+ G +P+ ++ +L+ NG VEE + + ++ ++ + Y
Sbjct: 403 RTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYT 462
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL----------IDGYTYTKLLDVLED 406
V++ +C+ G+ +A ++L L I GY LLD +D
Sbjct: 463 AVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKD 514
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 98/219 (44%), Gaps = 12/219 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y T++ + +A + + M+ +P YNI+ AF G
Sbjct: 178 EVMYGTVMDGLCKKGHTQKAFDLLRLMEQGIT---KPDTCIYNIVIDAFCKDG------- 227
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
++ L +M I PDI + S+I G + +F +M + N P+ +
Sbjct: 228 -MLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEM-IHLNIYPDVCT 285
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
++ +I GLC +G+ ++A E+ M KG P+ +YN ++ L G++ + MI
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMI 345
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+K D I+Y +++ + + +AM+L +E+ L
Sbjct: 346 DKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGL 384
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I + E +K+ +A+ +F+ + S+N +PSI + ++L G+
Sbjct: 356 YTALINGYVEKKKMDKAMQLFREI--SQN-GLKPSIVTCSVLLRGLFEVGRT-------- 404
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + F +M G P++++ +++ GY + V +A+ FH++ N Y
Sbjct: 405 ECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRRED-TNIQIYTA 463
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+GLC G+ A +++ G P +Y +++S G ++E L +M +
Sbjct: 464 VINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNG 523
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
D TY ++ R + E LKE+ K+ + T L+D++ +D
Sbjct: 524 CLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAED 576
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
GI + + ++I+G N V DA+ +F ++ P+ Y ++ GLC +G T+
Sbjct: 137 GIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQK 196
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L M++ P + YN ++ A +G ++ L EM +K P D ITY +++D
Sbjct: 197 AFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLID 256
Query: 369 EICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ + + + L E+ + N+ D T+ ++D L
Sbjct: 257 GLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGL 293
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 83/211 (39%), Gaps = 42/211 (19%)
Query: 236 ETIRCL------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF------------ 277
E ++CL F+QMV P S + ++K + H + + IF
Sbjct: 48 ENVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDA 107
Query: 278 -------------HQMGVVYNYLP---------NSFSYDYLIHGLCAQGRTKNARELCDE 315
H+ + ++ L N ++ LI GL A+ + K+A L +
Sbjct: 108 FALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKK 167
Query: 316 MKRKGFV-PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+ R+ P Y +++ L G ++ L M + D Y V+D C+ G
Sbjct: 168 LVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDG 227
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
A LL E++ KN+ D TYT L+D L
Sbjct: 228 MLDGATSLLNEMKQKNIPPDIITYTSLIDGL 258
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 15/231 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ II + A+ +F M + +P++ ++++L G+ +
Sbjct: 240 YSIIIDGLCKVGNWEEAICLFNEMVDQG---VQPNVVTFSVLIDMLCKEGQ--------V 288
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L + M+ GI P++F+ S+IKG+ L +N A +F M Y P+ SY+
Sbjct: 289 IKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPS-KGYEPDVISYNM 347
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK- 354
LI+G C + + A +L +EM G P K+ L+ AL L G+V++ K L+ +I+
Sbjct: 348 LINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDA-KELFRVIKPY 406
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
P D LD +C+ G EAMKL EL++ N+ +D T+ L+D L
Sbjct: 407 AMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGL 457
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 10/172 (5%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY-NYLPNSFSYDYLIHG 299
L+KQM G+ PD+ +LN +I N +N+ L G++ Y+P+ ++ LI G
Sbjct: 113 LYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLA--AMAGIMRRGYIPDVVTFTTLIKG 170
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC + R A +L M++ G P+ +Y +L+ L G + +K EM+ P
Sbjct: 171 LCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYV 230
Query: 360 F------ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
F I+Y ++D +C+ G EA+ L E+ ++ + + T++ L+D+L
Sbjct: 231 FNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDML 282
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+I ++ A +F M + L C P++ +Y L + G N I +
Sbjct: 164 FTTLIKGLCVEHRIIEATKLFMRM---QKLGCTPNVVTYGTLIKGLCALG-NINIALKWH 219
Query: 236 ETIRCLFKQMVND------GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+ +M+ND P++ S + +I G + +A+ +F++M V PN
Sbjct: 220 Q-------EMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEM-VDQGVQPN 271
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
++ LI LC +G+ A++L + M + G VP+ +Y SL+ L G++ +
Sbjct: 272 VVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFV 331
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
M K D I+Y +++ C+ + EAMKL E+
Sbjct: 332 SMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEM 368
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
R Y F + K + H +E + LF +M G P++ + ++IKG ++N
Sbjct: 155 RGYIPDVVTFTTLIKGLCVEHRIIEATK-LFMRMQKLGCTPNVVTYGTLIKGLCALGNIN 213
Query: 272 DALRIFHQM-----GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
AL+ +M V+N PN SY +I GLC G + A L +EM +G P+
Sbjct: 214 IALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVV 273
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+++ L+ L G+V + K L MI+ + TY +++ C G A +L +
Sbjct: 274 TFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM 333
Query: 387 QNKN----------LIDGYTYT 398
+K LI+GY T
Sbjct: 334 PSKGYEPDVISYNMLINGYCKT 355
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GV 282
KN YI E ++ LF ++ + ++ DI + +I G + + A +F ++ G+
Sbjct: 424 KNGYI----FEAMK-LFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGI 478
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
P++ +Y +IHG C +G+ A L +M+ G P +Y+ L+ + ++E
Sbjct: 479 Q----PDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLE 534
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY 395
+ V+ L MIEK D Y V D +C+ + E + LL+ + +GY
Sbjct: 535 KVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQKHRNGY 587
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
IFS N ++ G H + ++ QM + P+ + + LI+ LC R
Sbjct: 91 IFSFNRLLAGLAKIEHYSQVFSLYKQMHLA-GLWPDLLTLNILINCLCNVNRINEGLAAM 149
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+ R+G++P ++ +L+ L + + E K M + + +TY T++ +C
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209
Query: 374 GRAGEAMKLLKELQN 388
G A+K +E+ N
Sbjct: 210 GNINIALKWHQEMLN 224
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 26/257 (10%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEAL--YNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
A+K++ E D CG + YN ++ + + K+ A + M N +
Sbjct: 454 ASKLFDEAVD-----------CGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV- 501
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
P++ SYN + +G M+ +F M+ ++P++ + + +I G
Sbjct: 502 --PNVVSYNDMILGHCRKGN--------MDMASSVFSDMLARDLKPNVVTYSILIDGNFK 551
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
AL +F QM + N P F+++ +I+GLC G+ AR+ +GF+PS
Sbjct: 552 KGDSEKALDLFDQM-LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 610
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YNS+V G ++ + EM E + +TY ++++ C+ R A+K E+
Sbjct: 611 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 670
Query: 387 QNKNL-IDGYTYTKLLD 402
+ K L +D Y+ L+D
Sbjct: 671 REKGLELDVTAYSALID 687
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 15/229 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I F ++ ++ A+ M+ + LE + +Y+ L F R M
Sbjct: 647 YTSLINGFCKSNRIDLALKTRDEMR-EKGLEL--DVTAYSALIDGFCKRRD--------M 695
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF-SYD 294
E+ + LF +++ G+ P+ NSMI G+ N++ AL + +M + + +P +Y
Sbjct: 696 ESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM--INDRIPCDLGTYT 753
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GL +GR A +L EM KG VP +++ LV+ L G++E K L EM K
Sbjct: 754 TLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK 813
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ Y T++ R G EA L E+ ++ L+ D TY L++
Sbjct: 814 NMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 862
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
++N ++ + A ++ A+ F M + P + NIL TA + R
Sbjct: 192 VFNYLLNAYIRANRIENAIDCFNAMICQ---DVIPWVPYMNILLTALVRRN--------M 240
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
+ +R L+ +MV GI D F+++ M++ + V +A F + GV + +
Sbjct: 241 IGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLD----AG 296
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y +I +C + + EL +EMK +G+VPS ++ S++ A G + E ++ EM
Sbjct: 297 AYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEM 356
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
I +P++ + +++ C +G A+ L ++ L + TY+ L++
Sbjct: 357 INCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIE 408
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 124/298 (41%), Gaps = 41/298 (13%)
Query: 139 TYHIMTRKLGAAKMYQE----MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
TY+IM L E +D++VNQ + P+ YN +I + A
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGM-VPNVVS----YNDMILGHCRKGNMDMASS 525
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTYIN 231
VF M +R+L +P++ +Y+IL +G NT IN
Sbjct: 526 VFSDML-ARDL--KPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIIN 582
Query: 232 HV----YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
+ M R K + +G P + NS++ G+I +++ AL ++ +M +
Sbjct: 583 GLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM-CEFGVS 641
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN +Y LI+G C R A + DEM+ KG +Y++L+ ++E
Sbjct: 642 PNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDL 701
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+E++E + I Y +++ A+ K++ N + D TYT L+D L
Sbjct: 702 FFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGL 759
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 10/184 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PS ++ + A +++G +E +R L ++M+N G ++ S++KGY
Sbjct: 328 PSEATFTSVIVACVAQGN-------MVEALR-LKEEMINCGKPMNLVVATSLMKGYCAQG 379
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++ AL +F+++ PN +Y LI G C G + A EL +MK G PS +
Sbjct: 380 NLDSALNLFNKI-TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 438
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
NSL+ L + E L++ + TY ++ +C+ G+ EA LL + N
Sbjct: 439 NSLLRGY-LKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVN 497
Query: 389 KNLI 392
+ ++
Sbjct: 498 QGMV 501
>gi|255661004|gb|ACU25671.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 369
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 130/274 (47%), Gaps = 21/274 (7%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKL-GAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
C EL W R ++++ M R L K+ + M + +++A F Y T
Sbjct: 44 CFEL--WEMMGREGRRSVASFNTMIRVLFDNGKVEEAMS--IRELMAKSGFVEDSKTYGT 99
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
++ F + R +++++ V + + + +Y+ + A K +E
Sbjct: 100 LVNGFCKNRYINKSLQVLEIAEQKGGV---LDAFAYSAMINALCKEAK--------LEKA 148
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
C+ M+ G +P+ N++IKG + ++ ++DA+R+FH+MG ++ P+ +Y+ LI+
Sbjct: 149 VCVLNGMIKSGCKPNTCVYNALIKGLVGASKLDDAIRVFHEMGTTHSP-PDIVTYNILIN 207
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ--R 356
GL R A +L EM KG PS +Y+ L+ L L +VE ++ LW + K+ +
Sbjct: 208 GLFKGDRFGEAYDLVKEMLEKGLDPSVITYSLLMKGLCLGDKVEMALQ-LWNQVTKKGFK 266
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
P D + ++ +C G+ A+ L ++ N
Sbjct: 267 P-DVQMHNILIHGLCSVGKTQLALSLYLDMNRWN 299
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 19/257 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLAT---PSFCGTEALYNTIIYFFAEARKLSRA 192
DA Y M L ++ V+N M+ + P+ C +YN +I A KL A
Sbjct: 128 DAFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPNTC----VYNALIKGLVGASKLDDA 183
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ VF M + + P I +YNIL K Y L K+M+ G++P
Sbjct: 184 IRVFHEMGTTHS---PPDIVTYNILINGLF---KGDRFGEAYD-----LVKEMLEKGLDP 232
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + + ++KG L + V AL++++Q+ + P+ ++ LIHGLC+ G+T+ A L
Sbjct: 233 SVITYSLLMKGLCLGDKVEMALQLWNQV-TKKGFKPDVQMHNILIHGLCSVGKTQLALSL 291
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+M R P+ + N+L+ +G + + ++ + D I+Y L +C
Sbjct: 292 YLDMNRWNCAPNLVTQNTLMQGFYKDGNIRNALVIWARILRNELQPDIISYNITLKGLCS 351
Query: 373 RGRAGEAMKLLKELQNK 389
R +A+ L + +K
Sbjct: 352 CNRISDAILFLHDAVSK 368
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 117/247 (47%), Gaps = 27/247 (10%)
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
GA ++Y+ D+V + ++ + +YN ++ F A ++ +++ M E
Sbjct: 8 GAERVYE---DIVERKVSPDA-----VVYNAMLNGFYRAGRIEDCFELWEMMGR----EG 55
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
R S+ S+N + GK +E + + M G D + +++ G+ +
Sbjct: 56 RRSVASFNTMIRVLFDNGK--------VEEAMSIRELMAKSGFVEDSKTYGTLVNGFCKN 107
Query: 268 NHVNDALRIFH---QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
++N +L++ Q G V + +F+Y +I+ LC + + + A + + M + G P+
Sbjct: 108 RYINKSLQVLEIAEQKGGVLD----AFAYSAMINALCKEAKLEKAVCVLNGMIKSGCKPN 163
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ YN+L+ L ++++ ++ EM P D +TY +++ + + R GEA L+K
Sbjct: 164 TCVYNALIKGLVGASKLDDAIRVFHEMGTTHSPPDIVTYNILINGLFKGDRFGEAYDLVK 223
Query: 385 ELQNKNL 391
E+ K L
Sbjct: 224 EMLEKGL 230
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 14/229 (6%)
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
+I ++RK+ +A+ +FK M + P + +Y L GK + Y
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDK---AIYPDVVTYGALIDGL---GKQRRVKEAYD--- 51
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
LF++ G P + + N+MI G + +AL ++ M + + + P +Y LI
Sbjct: 52 --LFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLID 109
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
GLC +L +EM +G P++ +YN+LV+AL G +E L +M P
Sbjct: 110 GLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPP 169
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKEL---QNKNLIDGYTYTKLLDVL 404
+ IT+ ++ +C+ G A +++ E+ ++ D T+ +LD L
Sbjct: 170 ELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGL 218
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 14/259 (5%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRA 192
R + TY + L ++ V+ QM + C +A+ YNT+I F + ++L A
Sbjct: 275 RANTVTYSTVVDGLLKVGRMEDAVVVLRQM--RDAGCLPDAVTYNTLIDGFFKRQRLREA 332
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V + + M + PS+ +Y L G+ + E + + M G P
Sbjct: 333 VGLLREMLEAGF---HPSVVTYTTLCHGLCRSGR-------FDEAVE-ILDYMAARGCAP 381
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + +S++ G + V +AL F +M P+ +Y LI GLC G+ A E
Sbjct: 382 NAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEF 441
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+ M R G +P +++ L++ L G ++ ++ M E+ D +TY T++D +CR
Sbjct: 442 LERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCR 501
Query: 373 RGRAGEAMKLLKELQNKNL 391
R EA L +++++ L
Sbjct: 502 ASRVDEAFDLFQQMRSDGL 520
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 119/251 (47%), Gaps = 19/251 (7%)
Query: 159 VVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLE--CRPSIRSYN 215
VV++M S + + +N+++ + +++ A VFK R LE CRP++ +Y+
Sbjct: 193 VVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFK-----RALERGCRPNVVTYS 247
Query: 216 ILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
L K M+ L +MV G + + ++++ G + + DA+
Sbjct: 248 TLIDGLSKMAK--------MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+ QM LP++ +Y+ LI G + R + A L EM GF PS +Y +L L
Sbjct: 300 VLRQMRDA-GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 358
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY 395
+G +E V+ L M + + ITY +++D +C+ GR EA+ +++ ++ +
Sbjct: 359 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 418
Query: 396 T--YTKLLDVL 404
Y+ L+D L
Sbjct: 419 VIAYSALIDGL 429
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 16/271 (5%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
ED +V L A P DA TY+ + + +E ++ +ML F +
Sbjct: 295 EDAVVVLRQMRDAGCLP----DAVTYNTLIDGFFKRQRLREAVGLLREMLEA-GFHPSVV 349
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
Y T+ + + + AV + YM +R C P+ +Y+ + G+ T
Sbjct: 350 TYTTLCHGLCRSGRFDEAVEILDYMA-ARG--CAPNAITYSSIVDGLCKAGRVT------ 400
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
E + K ++ + P + + +++I G + +++A +M + +P+ ++
Sbjct: 401 -EALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERM-IRAGRIPDVVTFS 458
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI+GLC GR EL M +G VP +Y +LV L V+E +M
Sbjct: 459 ILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSD 518
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
D T RT++ + R +A ++ E
Sbjct: 519 GLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 22/263 (8%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA----TPSFCG 171
D L+ FNWA ++ + H +Y M LG + ++ N + + +
Sbjct: 91 DTSKALQFFNWA-QEMGYTHTEQSYFSMLEILGRNR---HLNTARNFLFSIEKRSRGIVK 146
Query: 172 TEA-LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
EA +N+++ F A ++ VF MK+ PS+ ++N L T L RG+
Sbjct: 147 LEARFFNSLMRNFNRAGLFQESIKVFTIMKSH---GVSPSVVTFNSLLTILLKRGRTNMA 203
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
VY E + G+ PD F+ N +I+G+ ++ V+D RIF+ + + P+
Sbjct: 204 KKVYDEMLSTY-------GVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLS-RFGCEPDV 255
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKG--FVPSSKSYNSLVSALALNGEVEETVKNL 348
+Y+ L+ GLC G+ A + M +K P+ +Y +L+ E+E+ +
Sbjct: 256 VTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVF 315
Query: 349 WEMIEKQRPVDFITYRTVLDEIC 371
EM+ + + ITY T++ +C
Sbjct: 316 EEMVNQGLKANNITYNTLIKGLC 338
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 28/258 (10%)
Query: 172 TEALYNTIIYFFAEARKLSRAV-YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
TE Y +++ R L+ A ++F K SR + + R +N L F G
Sbjct: 110 TEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGI-VKLEARFFNSLMRNFNRAG----- 163
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
++ E+I+ +F M + G+ P + + NS++ + N A +++ +M Y P++
Sbjct: 164 --LFQESIK-VFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDT 220
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE---ETVKN 347
F+++ LI G C G + + +++ R G P +YN+LV L G+V VK
Sbjct: 221 FTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKG 280
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN--------------KNLID 393
+ + P + +TY T++ C + +A+ + +E+ N K L +
Sbjct: 281 MGKKSVDLNP-NVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCE 339
Query: 394 GYTYTKLLDVLEDDFGNS 411
+ K+ D+LE G+
Sbjct: 340 ARKFEKIKDILEGTAGDG 357
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 121/267 (45%), Gaps = 20/267 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + + L A+ ++++ D++ +F +NT+++ A L A+ VF+
Sbjct: 329 TYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV-------NDGIE 251
M L+ +P +Y+ L + G + E L +++ DG +
Sbjct: 389 MSE---LKIQPDSATYSALVRSLCQGG--------HYEKAEDLLDKLLERKILLSGDGCK 437
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + + N + K + A + F Q+ P S Y LI G C +G ++ E
Sbjct: 438 PLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPS--YKTLIMGHCKEGTFESGYE 495
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L M RK F P ++Y SL++ L + +++L +M+ + T+ ++L ++
Sbjct: 496 LLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLL 555
Query: 372 RRGRAGEAMKLLKELQNKNLIDGYTYT 398
+GRA E+ L++ + +KN+ +++
Sbjct: 556 EQGRASESASLIQLMLDKNIRQNLSFS 582
>gi|255660998|gb|ACU25668.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 376
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 119/258 (46%), Gaps = 15/258 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVY 194
DA Y M L + V+N M+ S C A +YNT+I A K A+
Sbjct: 128 DAFAYSAMINGLCKEANLDKAVSVLNDMI--KSGCKPNAHVYNTLINGLVGASKFEDAIR 185
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
VF+ M R C P+I +YN L KN Y L K+M+ G+ P +
Sbjct: 186 VFREMGTVR---CSPTIITYNTLINGLC---KNEMFGEAYD-----LVKEMLEKGLNPSV 234
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ + ++KG L + V AL++++Q+ + + P+ ++ LIHGLC+ G+T+ A L
Sbjct: 235 ITYSMLMKGLCLDHKVERALQLWNQV-ISKGFKPDVQMHNILIHGLCSVGKTQLALSLYJ 293
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M R P+ ++N+L+ +G++ + ++ D I+Y L +C
Sbjct: 294 DMNRWKCAPNLVTHNTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCN 353
Query: 375 RAGEAMKLLKELQNKNLI 392
R +A+ L + K ++
Sbjct: 354 RICDAILFLHDAVRKKIV 371
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 115/244 (47%), Gaps = 21/244 (8%)
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
GA ++Y+E + + +P +YN ++ + K+ +++ M N N
Sbjct: 8 GAERVYKE----IVESKVSPD----AVVYNAMLNGYFRVAKIKDCFELWEMMGNEGN--- 56
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
S+ S+NI+ +GK ++ + +++ M D + ++ G+ +
Sbjct: 57 -RSVSSFNIMMRGLFDKGK--------VDEVISIWELMKKSDFVEDSITYGILVHGFCKN 107
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++N +L + +M + ++F+Y +I+GLC + A + ++M + G P++
Sbjct: 108 GYINKSLHVL-EMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMIKSGCKPNAHV 166
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN+L++ L + E+ ++ EM + ITY T+++ +C+ GEA L+KE+
Sbjct: 167 YNTLINGLVGASKFEDAIRVFREMGTVRCSPTIITYNTLINGLCKNEMFGEAYDLVKEML 226
Query: 388 NKNL 391
K L
Sbjct: 227 EKGL 230
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 21/190 (11%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY+ + L +M+ E D+V +ML PS Y+ ++ K+ RA+ +
Sbjct: 201 TYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSV----ITYSMLMKGLCLDHKVERALQL 256
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ + S+ +P ++ +NIL S GK +Y++ R P++
Sbjct: 257 WNQVI-SKGF--KPDVQMHNILIHGLCSVGKTQLALSLYJDMNRW--------KCAPNLV 305
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N++++G+ + +AL I+ + V+ N L P+ SY+ + GLC+ R +A
Sbjct: 306 THNTLMEGFYKDGDIRNALVIWAR--VLRNGLEPDIISYNITLKGLCSCNRICDAILFLH 363
Query: 315 EMKRKGFVPS 324
+ RK VP+
Sbjct: 364 DAVRKKIVPT 373
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 122/258 (47%), Gaps = 18/258 (6%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
AK Y MD++V + L +F NT++Y + ++ A + + + P
Sbjct: 432 AKAYTLMDEMVRRGLKLDTFT-----LNTVLYNLCKEKRYEEAQGLLQSPPQRGFM---P 483
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
SY + A Y E L+ +M+ + P I + N++IKG
Sbjct: 484 DEVSYGTVMAA--------YFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGR 535
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ +A+ +++ + +P+ +Y+ +IH C +G +NA + ++M F P + N
Sbjct: 536 LKEAIDKLNEL-MEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCN 594
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+L++ L LNG++++ +K +EK + VD ITY T++ +C+ G A+ +++ +
Sbjct: 595 TLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEAR 654
Query: 390 NL-IDGYTYTKLLDVLED 406
L D +TY +L L +
Sbjct: 655 GLQPDAFTYNVVLSALSE 672
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 14/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ L A + MK RP+ YN L +A+ G ++
Sbjct: 242 YNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPT---YNTLVSAYARLG--------WI 290
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + M +G EPD+++ N + G + V++A R+ +M + LP+ +Y+
Sbjct: 291 KQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNT 350
Query: 296 LIHGLCAQGR-TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L C + R + +A L +EM+ KG + ++N ++ L +GE+E + L +M +
Sbjct: 351 LADA-CFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADD 409
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D ITY T++ C+ G +A L+ E+ + L +D +T +L
Sbjct: 410 GLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVL 457
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 9/203 (4%)
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
R + RPS+++ N + +A L+R +T ++ F+ +V + P+ ++ N ++
Sbjct: 159 RRVRVRPSLQAANAVLSA-LARSPSTS-PQASLDA----FRSIVALRLHPNHYTFNLLVH 212
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
+ + DAL M + P++ +Y+ L++ C +G AR L MK+ G
Sbjct: 213 THCSKGTLADALSTLSTMQG-FGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVA 271
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P+ +YN+LVSA A G +++ K + M D TY + +C+ G+ EA +L
Sbjct: 272 PTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRL 331
Query: 383 LKELQNKN--LIDGYTYTKLLDV 403
E++ L D TY L D
Sbjct: 332 KDEMERLGTLLPDVVTYNTLADA 354
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 14/268 (5%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
STY+ + + L +E D +N+++ + YN II+ + + L A F+
Sbjct: 521 STYNTLIKGLSRMGRLKEAIDKLNELMEK-GLVPDDTTYNIIIHAYCKEGDLENA---FQ 576
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
+ +P + + N L GK ++ LF+ V G + D+ +
Sbjct: 577 FHNKMVENSFKPDVVTCNTLMNGLCLNGK--------LDKALKLFESWVEKGKKVDVITY 628
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N++I+ V+ AL F M P++F+Y+ ++ L GRT+ A+ + ++
Sbjct: 629 NTLIQTMCKDGDVDTALHFFADMEA-RGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLA 687
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
G + S S L + E + K E +E + Y +++ +C G+
Sbjct: 688 ESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFK 747
Query: 378 EAMKLLKELQNKNL-IDGYTYTKLLDVL 404
EA +L E+ K + +D TY L++ L
Sbjct: 748 EAKAILDEMMQKGMSVDSSTYITLMEGL 775
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 131/349 (37%), Gaps = 77/349 (22%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA TY+ + M E ++ +M T YNT++ +A + +A V
Sbjct: 238 DAVTYNTLLNAHCRKGMLGEARALLARM-KKDGVAPTRPTYNTLVSAYARLGWIKQATKV 296
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGK------------------------NTYIN 231
+ M + E P + +YN+L GK NT +
Sbjct: 297 VEAM-TANGFE--PDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLAD 353
Query: 232 HVYMETIRC------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+ RC L ++M G++ + + N +IKG + AL ++M
Sbjct: 354 ACF--KCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMAD-DG 410
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR--------------------------- 318
P+ +Y+ LIH C G A L DEM R
Sbjct: 411 LAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQ 470
Query: 319 --------KGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFITYRTVLDE 369
+GF+P SY ++++A E ++ LW EMIEK+ TY T++
Sbjct: 471 GLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALR-LWDEMIEKKLTPSISTYNTLIKG 529
Query: 370 ICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL--EDDFGNSIRHH 415
+ R GR EA+ L EL K L+ D TY ++ E D N+ + H
Sbjct: 530 LSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFH 578
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 13/254 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D T + + L K Y+E ++ Q F E Y T++ + + A
Sbjct: 446 LKLDTFTLNTVLYNLCKEKRYEEAQGLL-QSPPQRGFMPDEVSYGTVMAAYFKEYNSEPA 504
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ ++ M + PSI +YN L G+ E I L +++ G+ P
Sbjct: 505 LRLWDEMIEKK---LTPSISTYNTLIKGLSRMGR-------LKEAIDKL-NELMEKGLVP 553
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D + N +I Y + +A + FH V ++ P+ + + L++GLC G+ A +L
Sbjct: 554 DDTTYNIIIHAYCKEGDLENAFQ-FHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKL 612
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+ KG +YN+L+ + +G+V+ + +M + D TY VL +
Sbjct: 613 FESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSE 672
Query: 373 RGRAGEAMKLLKEL 386
GR EA +L +L
Sbjct: 673 AGRTEEAQNMLHKL 686
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 32/251 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YNT+I +A+KL AV + M+ + C P+ + L G+
Sbjct: 36 YNTLINGLCKAKKLKEAVGLLLEMEAAG---CFPNSVTCTTLMDGLCKDGRMDEAMELLE 92
Query: 227 ------------------NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ + N+ ++ + LF +M+ GI ++ + + ++ G
Sbjct: 93 AMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLG 152
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+A + + M + P+ +Y LI GLC GR +A +L + M KG PS+ +Y
Sbjct: 153 QWKEANTVLNAM-AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 211
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-Q 387
N L+S L G V + K L MIEK + D +TY T++ +C +G+ EA+KL +
Sbjct: 212 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFD 271
Query: 388 NKNLIDGYTYT 398
N+N ++ +T
Sbjct: 272 NENCLEPNVFT 282
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 113/234 (48%), Gaps = 19/234 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + K+ A+ +F M ++ N P++ ++N+L G+ T ++
Sbjct: 246 YNTLMKGLCDKGKVDEALKLFNSMFDNENC-LEPNVFTFNMLIGGLCKEGRLTKAVKIH- 303
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++MV G ++ + N ++ G + + + +A+ ++ Q+ + ++PNSF+Y
Sbjct: 304 -------RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV-LDLGFVPNSFTYSI 355
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C A+ L EM+ G P+ YN+L+++L G +E+ EM
Sbjct: 356 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 415
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-----IDGYTYTKLLDVL 404
D I++ T++D + G + +KELQ K + D T++ L++ L
Sbjct: 416 CEPDIISFNTMIDGTLKAGD----FQFVKELQMKMVEMGLRPDALTFSTLINRL 465
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I F + R L+ A +F M R P++ YN L + G +
Sbjct: 353 YSILIDGFCKMRMLNIAKGLFCEM---RTHGLNPALFDYNTLMASLCKEGS--------L 401
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + LF++M N EPDI S N+MI G + + + +M V P++ ++
Sbjct: 402 EQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKM-VEMGLRPDALTFST 460
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+ L G A+ + M GF P + Y+SL+ L+ G+ E + L +M K
Sbjct: 461 LINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLL 383
+D T+L +C + + M+LL
Sbjct: 521 TVLDRKIVSTILTCLCHSIQEVDVMELL 548
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
CG YN ++ +A K+ A+ ++K + +L P+ +Y+IL F K
Sbjct: 312 CGNLVTYNMLLGGCLKAGKIKEAMELWKQV---LDLGFVPNSFTYSILIDGFC---KMRM 365
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+N + LF +M G+ P +F N+++ + A +F +MG N P+
Sbjct: 366 LN-----IAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA-NCEPD 419
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
S++ +I G G + +EL +M G P + ++++L++ L+ GE++E L
Sbjct: 420 IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE 479
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
M+ D + Y ++L + +G E + LL ++ K +
Sbjct: 480 RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 522
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
+N ++KG + V +A+ + +MG + P+ SY+ LI+GLC + K A L EM
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGR-KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM 59
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
+ G P+S + +L+ L +G ++E ++ L M +K D + Y T++ C G
Sbjct: 60 EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 119
Query: 377 GEAMKLLKELQNKNL 391
+L E+ K +
Sbjct: 120 DRGKELFDEMLGKGI 134
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 138/287 (48%), Gaps = 21/287 (7%)
Query: 122 ELFNWASK---QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
E+F A K QP + +T++I+ + +E ++NQM C YNT
Sbjct: 197 EVFQDAVKLGVQP----NVNTFNILIHGYCSDNNTEEALRLINQM-GEYGCCPDNVTYNT 251
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
++ + +L++ + MKNS P+ +YNIL + Y +++
Sbjct: 252 VLTALCKRSQLTQVRDLLLQMKNSGLF---PNRNTYNILV--------HGYCKLKWLKEA 300
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+ + M G+ PD+++ N+M++G +++A+R+ +M + +P+ +Y+ LI
Sbjct: 301 AEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMES-FKLVPDVVTYNTLID 359
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G + A +L +EMK +G + ++N ++ G+++E + +M+E
Sbjct: 360 GCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSP 419
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D TY T+++ C+ G+ EA K++ E+ K L +D +T LL +
Sbjct: 420 DCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTM 466
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 128/288 (44%), Gaps = 24/288 (8%)
Query: 108 CNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL---GAAKMYQEMDDVVNQML 164
C + L+E V +EL P D TY+ M R L G + D +
Sbjct: 292 CKLKWLKEAAEV-IELMTGKGMLP----DVWTYNTMVRGLCDEGKIDEAVRLRDKMESFK 346
Query: 165 ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR 224
P YNT+I E R A FK ++ + + + ++NI+ F +
Sbjct: 347 LVPDV----VTYNTLIDGCFEHRGSDAA---FKLVEEMKARGVKENGVTHNIMIKWFCTE 399
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
GK ++V + +MV G PD F+ N+MI GY + + +A ++ +MG
Sbjct: 400 GKIDEASNVMV--------KMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
L ++F+ + L+H +C + + +A L + +++G++ +Y +L+ + + +
Sbjct: 452 LKL-DTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRA 510
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+K EM E ITY T++ +C G+ +A+ L EL K L+
Sbjct: 511 LKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLV 558
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 42/231 (18%)
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+F MK L RP++ + N L A + N+ + V+ R +F+ V G++P++
Sbjct: 160 IFNKMKR---LRFRPNLLTCNTLLNALVR--SNSSHSLVFS---REVFQDAVKLGVQPNV 211
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL------------------- 287
+ N +I GY N+ +ALR+ +QMG V YN +
Sbjct: 212 NTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQ 271
Query: 288 -------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
PN +Y+ L+HG C K A E+ + M KG +P +YN++V L G+
Sbjct: 272 MKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGK 331
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
++E V+ +M + D +TY T++D + A KL++E++ + +
Sbjct: 332 IDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGV 382
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 87/167 (52%), Gaps = 6/167 (3%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L+++M GI I + N++I+G LS + A+ +++ + +P+ + + +IHG
Sbjct: 513 LWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNEL-LEKGLVPDESTSNIIIHGY 571
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE--TVKNLWEMIEKQRPV 358
C +G + A + ++M P + N L+ L G +E+ T+ N W I K +P+
Sbjct: 572 CWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTW--ISKGKPM 629
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +TY ++ C+ R +A L+ E++ KNL D YTY ++ L
Sbjct: 630 DTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGL 676
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 32/268 (11%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+++EM + T YNTII + K +AV + +
Sbjct: 510 ALKLWEEMKET--------GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLV--- 558
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + NI+ + G +E +MV ++PDIF+ N +++G
Sbjct: 559 PDESTSNIIIHGYCWEGA--------VEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREG 610
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ L +F+ + ++ +Y+ +I C + R ++A +L EM+ K P +Y
Sbjct: 611 MLEKGLTLFNTW-ISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTY 669
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDF-----------ITYRTVLDEICRRGRAG 377
N++V+ L G EE K + EK + V + Y + +C +G+
Sbjct: 670 NAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYK 729
Query: 378 EAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+AMKL ++ + K + ++ YTY KL+D L
Sbjct: 730 DAMKLFQQAEQKGVSLNKYTYIKLMDGL 757
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 121/256 (47%), Gaps = 15/256 (5%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
+TY+I+ K +E +V+ +++ YNT++ + K+ AV +
Sbjct: 282 NTYNILVHGYCKLKWLKEAAEVI-ELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRD 340
Query: 198 YMKNSRNLECRPSIRSYNILFTA-FLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
M++ + P + +YN L F RG + L ++M G++ + +
Sbjct: 341 KMES---FKLVPDVVTYNTLIDGCFEHRGSDAAFK---------LVEEMKARGVKENGVT 388
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N MIK + +++A + +M V + P+ F+Y+ +I+G C G+ A ++ DEM
Sbjct: 389 HNIMIKWFCTEGKIDEASNVMVKM-VESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM 447
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
RKG + + N+L+ + L ++++ + ++ +D +TY T++ + +A
Sbjct: 448 GRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQA 507
Query: 377 GEAMKLLKELQNKNLI 392
A+KL +E++ ++
Sbjct: 508 DRALKLWEEMKETGIV 523
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 12/284 (4%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LE+F W K F+ + LG + ++ + S+ Y ++I
Sbjct: 22 LEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLI 81
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ AR+ + +F+ M+ R + +YN++ + RG + + I+
Sbjct: 82 SILSRARRFDEGITLFETMQREGQ---RGNAVTYNVMLDLYGKRGDS-------WDRIQS 131
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF++M + I PD ++ N+MI I ++H +ALR+F +M PN +Y+ L+
Sbjct: 132 LFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEA-GCCPNRVTYNALLDVY 190
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
G K A EL EM+ G P+ +YN L++A A G +E ++ K D
Sbjct: 191 GKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDE 250
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDV 403
TY T++ R R +A++ E++ N TY L+D+
Sbjct: 251 FTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDI 294
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 28/269 (10%)
Query: 134 RHDASTYHIMTRKLGA--------AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
R +A TY++M G ++QEM D+ + YNT+I +
Sbjct: 106 RGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDL--------EISPDDYTYNTMITACIQ 157
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
A+ +F+ MK + C P+ +YN L + G + + + +E M
Sbjct: 158 NSHCQEALRLFQEMKEAG---CCPNRVTYNALLDVYGKGGMHKEASELLVE--------M 206
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
GI P+I + N +I Y + ++A + + + P+ F+Y LI R
Sbjct: 207 EAAGISPNIVTYNELIAAYARAGLCDEAAALKKSL-LSKGLCPDEFTYCTLISAFNRAER 265
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
+ A E EM++ P+ +YN L+ ++++ +K M EK D +T+ +
Sbjct: 266 YEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNS 325
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLIDG 394
+L G E + +E++ + G
Sbjct: 326 LLKSFGNCGMLTEVSNVFREMKRAGYMPG 354
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
Q+ ++G PDI N+MI + A+++ ++ P+ +Y+ L+ +
Sbjct: 486 QLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKA-QLKPDGVTYNCLMSMYGRE 544
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G A E+ EM+R G P+ +YN+L+ + +G +++ + +M+ + D T+
Sbjct: 545 GMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTF 604
Query: 364 RTVLDEICRRGRAGEAMKLLK----------ELQNKNLIDGY 395
T++ G EA+ +++ ++ K L+DGY
Sbjct: 605 NTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 137/358 (38%), Gaps = 84/358 (23%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY + A+ Y++ + +M TP+ YN +I + KL
Sbjct: 249 DEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNI----VTYNILIDIYGRMEKLDDM 304
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET--------------- 237
+ VFK+M+ C P + ++N L +F + G T +++V+ E
Sbjct: 305 MKVFKFMQEKN---CTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNIL 361
Query: 238 IRC------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
I C ++K ++ G++P + + +++ ++ +M
Sbjct: 362 IECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGL 421
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR-----------KGFV------------ 322
L ++ + LIH G+ R+ DE+++ K FV
Sbjct: 422 QLSDA-CHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEA 480
Query: 323 -------------PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
P K +N+++S A G +E VK L E+ + Q D +TY ++
Sbjct: 481 QLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSM 540
Query: 370 ICRRGRAGEAMKLLKELQNK----NLIDG----YTYTK--LLDVLEDDFGNSIRHHLR 417
R G +A +++ E++ NLI Y+YTK +D FG+ + +R
Sbjct: 541 YGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVR 598
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 86/233 (36%), Gaps = 47/233 (20%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
+ + L + C E Y T+I F A + +A+ F M R C P+I +YNIL
Sbjct: 236 ALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEM---RKTNCTPNIVTYNILI 292
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
+ Y ++ + +FK M PD+ + NS++K + + + +F
Sbjct: 293 --------DIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFR 344
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
EMKR G++P ++N L+
Sbjct: 345 ------------------------------------EMKRAGYMPGVDTFNILIECYGRC 368
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
G V+ +V ++ T+ ++ + R GR + K+ +E+ L
Sbjct: 369 GYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGL 421
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAE 185
++ + + D TY+ + G MY + ++V+++M P+ YNT++Y + +
Sbjct: 523 RKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNL----ITYNTLLYSYTK 578
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
++ A VF M +R RP ++N L ++ S G +Y E + + + M
Sbjct: 579 HGRMDDAARVFGDMVAAR---VRPDNFTFNTLVGSYSSLG-------LYKEALS-VIEYM 627
Query: 246 VNDGIEPDIFSLNSMIKGY 264
G +P + +++ GY
Sbjct: 628 TEHGCQPTQITFKALLDGY 646
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 119/220 (54%), Gaps = 17/220 (7%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K A+ +F+ M +SR L P++ ++ LF+A +++ K + + L KQM
Sbjct: 166 KADDAIDLFRDMIHSRPL---PTVIDFSRLFSA-IAKTKQ-------YDLVLALCKQMEL 214
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV--YNYLPNSFSYDYLIHGLCAQGR 305
GI ++++L+ MI + + A F MG + Y PN+ ++ LI+GLC +GR
Sbjct: 215 KGIAHNLYTLSIMINCFCRCRKLCLA---FSAMGKIIKLGYEPNTITFSTLINGLCLEGR 271
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A EL D M G P + N+LV+ L L+G+ E + + +M+E + +TY
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 331
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
VL+ +C+ G+ AM+LL++++ +N+ +D Y+ ++D L
Sbjct: 332 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 371
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F A + + + M + P++ ++++L +F+ GK +
Sbjct: 399 YNILIGGFCNAGRWDDGAKLLRDMIKRK---INPNVVTFSVLIDSFVKEGK--------L 447
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L K+M++ GI PD + S+I G+ NH++ A ++ M V PN +++
Sbjct: 448 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM-VSKGCDPNIRTFNI 506
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C R + EL +M +G V + +YN+L+ G++ + EM+ ++
Sbjct: 507 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 566
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
P + +TY+ +LD +C G + +A+++ ++++ +
Sbjct: 567 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 602
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 48/260 (18%)
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
+I F RKL A F M L P+ +++ L G+ + E +
Sbjct: 227 MINCFCRCRKLCLA---FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS-------EAL 276
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY----- 293
L +MV G +PD+ ++N+++ G LS +A+ + +M V Y PN+ +Y
Sbjct: 277 E-LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM-VEYGCQPNAVTYGPVLN 334
Query: 294 ------------------------------DYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+I GLC G NA L +EM+ KG
Sbjct: 335 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 394
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+ +YN L+ G ++ K L +MI+++ + +T+ ++D + G+ EA +L
Sbjct: 395 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 454
Query: 384 KELQNKNLI-DGYTYTKLLD 402
KE+ ++ + D TYT L+D
Sbjct: 455 KEMIHRGIAPDTITYTSLID 474
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 13/236 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + +A ++ + +F+ M + R + +YN L F GK +
Sbjct: 504 FNILINGYCKANRIDDGLELFRKM-SLRGVVA--DTVTYNTLIQGFCELGK--------L 552
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF++MV+ + P+I + ++ G + AL IF ++ L Y+
Sbjct: 553 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI-YNI 611
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+IHG+C + +A +L + KG P K+YN ++ L G + E +M E
Sbjct: 612 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 671
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDDFGN 410
D TY ++ G A +++KL++EL+ +D T ++D+L DD N
Sbjct: 672 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDKAN 727
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ II + L A +F M+ +I +YNIL F + G+
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKG---ITTNIITYNILIGGFCNAGR--------W 412
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L + M+ I P++ + + +I ++ + +A + +M + P++ +Y
Sbjct: 413 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM-IHRGIAPDTITYTS 471
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C + A ++ D M KG P+ +++N L++ +++ ++ +M +
Sbjct: 472 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 531
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVLEDD 407
D +TY T++ C G+ A +L +E+ ++ + TY LLD L D+
Sbjct: 532 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 584
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 26/257 (10%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEAL--YNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
A+K++ E D CG + YN ++ + + K+ A + M N +
Sbjct: 414 ASKLFDEAVD-----------CGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV- 461
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
P++ SYN + +G M+ +F M+ ++P++ + + +I G
Sbjct: 462 --PNVVSYNDMILGHCRKGN--------MDMASSVFSDMLARDLKPNVVTYSILIDGNFK 511
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
AL +F QM + N P F+++ +I+GLC G+ AR+ +GF+PS
Sbjct: 512 KGDSEKALDLFDQM-LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 570
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YNS+V G ++ + EM E + +TY ++++ C+ R A+K E+
Sbjct: 571 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 630
Query: 387 QNKNL-IDGYTYTKLLD 402
+ K L +D Y+ L+D
Sbjct: 631 REKGLELDVTAYSALID 647
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 15/229 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I F ++ ++ A+ M+ + LE + +Y+ L F R M
Sbjct: 607 YTSLINGFCKSNRIDLALKTRDEMR-EKGLEL--DVTAYSALIDGFCKRRD--------M 655
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF-SYD 294
E+ + LF +++ G+ P+ NSMI G+ N++ AL + +M + + +P +Y
Sbjct: 656 ESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM--INDRIPCDLGTYT 713
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GL +GR A +L EM KG VP +++ LV+ L G++E K L EM K
Sbjct: 714 TLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK 773
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ Y T++ R G EA L E+ ++ L+ D TY L++
Sbjct: 774 NMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 822
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
++N ++ + A ++ A+ F M + P + NIL TA + R
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQ---DVIPWVPYMNILLTALVRRN--------M 200
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
+ +R L+ +MV GI D F+++ M++ + V +A F + GV + +
Sbjct: 201 IGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLD----AG 256
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y +I +C + + EL +EMK +G+VPS ++ S++ A G + E ++ EM
Sbjct: 257 AYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEM 316
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
I +P++ + +++ C +G A+ L ++ L + TY+ L++
Sbjct: 317 INCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIE 368
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 124/298 (41%), Gaps = 41/298 (13%)
Query: 139 TYHIMTRKLGAAKMYQE----MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
TY+IM L E +D++VNQ + P+ YN +I + A
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGM-VPNVVS----YNDMILGHCRKGNMDMASS 485
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTYIN 231
VF M +R+L +P++ +Y+IL +G NT IN
Sbjct: 486 VFSDML-ARDL--KPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIIN 542
Query: 232 HV----YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
+ M R K + +G P + NS++ G+I +++ AL ++ +M +
Sbjct: 543 GLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM-CEFGVS 601
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN +Y LI+G C R A + DEM+ KG +Y++L+ ++E
Sbjct: 602 PNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDL 661
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+E++E + I Y +++ A+ K++ N + D TYT L+D L
Sbjct: 662 FFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGL 719
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 10/184 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
PS ++ + A +++G +E +R L ++M+N G ++ S++KGY
Sbjct: 288 PSEATFTSVIVACVAQGN-------MVEALR-LKEEMINCGKPMNLVVATSLMKGYCAQG 339
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++ AL +F+++ PN +Y LI G C G + A EL +MK G PS +
Sbjct: 340 NLDSALNLFNKI-TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNV 398
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
NSL+ L + E L++ + TY ++ +C+ G+ EA LL + N
Sbjct: 399 NSLLRGY-LKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVN 457
Query: 389 KNLI 392
+ ++
Sbjct: 458 QGMV 461
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 14/267 (5%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
A+TY + + A + D++ +M + +Y I+ +A + A F
Sbjct: 306 AATYGCIVKLFTKAGNMAKALDILEEM-DKHGVSPNKMIYAMIMDGYARGGDFTAA---F 361
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
K ++ + +P I +YNIL AF G+ M+ + + + + + P I +
Sbjct: 362 KVWEDMVSAGLKPDIVTYNILVHAFCKAGR--------MDKALGVLENIQANRLLPTIET 413
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
S++ GY+ H+ AL +F ++ P SY+ L+ GL + +NAR + DEM
Sbjct: 414 YTSILDGYVKGGHIQKALEVFDRIKTA-GLRPGVVSYNSLLSGLAKARQMENARLMLDEM 472
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
G VP+ +SY +L A G+VE+ M ++ +D + Y +L C+ G
Sbjct: 473 LANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAM 532
Query: 377 GEAMKLLKELQNKNLI-DGYTYTKLLD 402
A+++ +++ + L + TY +LD
Sbjct: 533 QRAVEVFQQITDAGLKHNRITYCTMLD 559
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 15/274 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVV--NQMLATPSFCGTEALYNTIIYFFAEARKL 189
R H HI T + A ++M+ V + + + EA++ +II +A A
Sbjct: 158 RASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNN 217
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A + F+ K + NL P YN + A+ G MET+ L QM +G
Sbjct: 218 EAAEHWFEKFK-AENL--VPGGIVYNSIVQAYCQAGN--------METVEALLAQMEEEG 266
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
+ ++ +++ G+ L FH++ P + +Y ++ G A
Sbjct: 267 FQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKAC-GLSPTAATYGCIVKLFTKAGNMAKA 325
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
++ +EM + G P+ Y ++ A G+ K +M+ D +TY ++
Sbjct: 326 LDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHA 385
Query: 370 ICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
C+ GR +A+ +L+ +Q L+ TYT +LD
Sbjct: 386 FCKAGRMDKALGVLENIQANRLLPTIETYTSILD 419
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 110/269 (40%), Gaps = 46/269 (17%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D TY+I+ A + V+ + A E Y +I+ + + + +A
Sbjct: 372 LKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIET-YTSILDGYVKGGHIQKA 430
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ VF +K + RP + SYN L + L++ + ME R + +M+ +G+ P
Sbjct: 431 LEVFDRIKTAG---LRPGVVSYNSLLSG-LAKARQ-------MENARLMLDEMLANGVVP 479
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL----------------- 287
+ S ++ +GY + V A +F +M V Y L
Sbjct: 480 NERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVF 539
Query: 288 ---------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
N +Y ++ G +G AR+L +M++ GF + Y S + A +
Sbjct: 540 QQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRS 599
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVL 367
G+ EE + L M EK+ V+ TY T++
Sbjct: 600 GDTEEVTETLAVMREKKLEVNARTYTTLI 628
>gi|224081503|ref|XP_002306437.1| predicted protein [Populus trichocarpa]
gi|222855886|gb|EEE93433.1| predicted protein [Populus trichocarpa]
Length = 462
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 148/297 (49%), Gaps = 27/297 (9%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
+D ++ ++ F+ +P D TY+ + + L ++++ + +++M ++
Sbjct: 175 DDAILLVKEFSSKHSKP----DTFTYNFLVKCLCKSRIFNSVYSFIDEMKSSFDIKPDLV 230
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC--RPSIRSYNILFTAF--LSRGKNTYI 230
Y +I A+ + A + +K EC +P YN + + L++G
Sbjct: 231 TYTILIDNVCNAKNIREADRLVAVLK-----ECGLKPDAFLYNTIMKGYCLLNKG----- 280
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
+E +R ++KQM +G+EPD+ + N++I G V++A ++ M V + P++
Sbjct: 281 ----IEAVR-IYKQMKEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIM-VESGHFPDA 334
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y L++G+C +G A L +EM+ KG P+S +YN+L+ + + V+ L+
Sbjct: 335 VTYTSLMNGMCREGDVLGAAALLEEMELKGCSPNSCTYNTLLHGFCKGRRLNKGVE-LYG 393
Query: 351 MIEKQ-RPVDFITYRTVLDEICRRGRAGEAMKLLK-ELQNKNLIDGYTYTKLLDVLE 405
+I+K ++ +Y T + +CR GR EA ++ +++K+L D YT L L+
Sbjct: 394 VIKKGGMKLETASYATFVRALCREGRVAEAYEVFDYAVESKSLTDVAAYTTLESTLK 450
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 24/267 (8%)
Query: 131 PRFRHDASTYHIMTRK--LGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
P D STYH++ + V+N M+ F + + I A +
Sbjct: 115 PSLSPDRSTYHVLLSQSCREPDSSLSSAQKVLNLMI-NKGFKPNQFTVDVAIRSLCSAGR 173
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY--METIRCLFKQMV 246
+ A+ + K + + +P +YN L K+ N VY ++ ++ F
Sbjct: 174 VDDAILLVKEFSSKHS---KPDTFTYNFLVKCLC---KSRIFNSVYSFIDEMKSSFD--- 224
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALR---IFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
I+PD+ + +I + ++ +A R + + G+ P++F Y+ ++ G C
Sbjct: 225 ---IKPDLVTYTILIDNVCNAKNIREADRLVAVLKECGLK----PDAFLYNTIMKGYCLL 277
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
+ A + +MK +G P +YN+L+ L+ G V E K L M+E D +TY
Sbjct: 278 NKGIEAVRIYKQMKEEGVEPDLVTYNTLIFGLSKCGRVSEAKKLLKIMVESGHFPDAVTY 337
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKN 390
++++ +CR G A LL+E++ K
Sbjct: 338 TSLMNGMCREGDVLGAAALLEEMELKG 364
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 125/257 (48%), Gaps = 19/257 (7%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ D +++ + + L AK + + ++V +ML E +N +I + ++ A+
Sbjct: 417 KPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRI-NEMTFNILIDSLCQNGQVKDAI 475
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
VF+ M R C P I +Y+ L F +G + E LF+ M D
Sbjct: 476 EVFELMPKYR---CMPDIVTYSSLINGFSEQGLD--------EMAFDLFRSM---PCRAD 521
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
IFS N+ +KG ++ +DA + M V + LPN +++ LI LC +G A ++
Sbjct: 522 IFSYNATLKGLCMAARWDDAGELIADM-VTEDCLPNEVTFNILISSLCQKGLVNRAIDVY 580
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
++M + G P +YN+L++ + G +++ +K L M + D I+Y ++L +CR
Sbjct: 581 EQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEP---DTISYNSILKGLCRA 637
Query: 374 GRAGEAMKLLKELQNKN 390
R +A KL+ E+ KN
Sbjct: 638 ERWKDAEKLVTEMLRKN 654
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 19/230 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYM-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
YNT++ A++ +A + + M +NS C P+ ++ AF G
Sbjct: 219 YNTVLKGLCCAKQWEQAEELMREMIRNS----CHPNEVTFATQIRAFCQNG--------L 266
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++ L +QM G PD+ ++++ G+ V++AL++ + M PN+ Y+
Sbjct: 267 LDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLC----RPNTVCYN 322
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+ GLC GR + EL EM RK P+ ++++L+++L N VE V+ L +M +
Sbjct: 323 AALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKY 382
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
D ++Y T++ + RA +A+KLLK + K D ++ +L L
Sbjct: 383 GYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKP--DTISFNAVLKCL 430
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 128/270 (47%), Gaps = 20/270 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + + L AK +++ ++++ +M+ S E + T I F + L RAV +
Sbjct: 215 DTYTYNTVLKGLCCAKQWEQAEELMREMIRN-SCHPNEVTFATQIRAFCQNGLLDRAVEL 273
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M C P + Y+ L F G+ E ++ L + P+
Sbjct: 274 LEQMPK---YGCTPDVIIYSTLVNGFSEHGRVD-------EALKLLNTMLC----RPNTV 319
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
N+ +KG ++ + + +M V + PN ++ LI+ LC + A E+ ++
Sbjct: 320 CYNAALKGLCIAGRWEEVGELIAEM-VRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQ 378
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M++ G++P SYN+++S + ++ +K L M+ K D I++ VL +C+ R
Sbjct: 379 MQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKP---DTISFNAVLKCLCKAKR 435
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+A++L+ ++ K+ I+ T+ L+D L
Sbjct: 436 WYDAVELVAKMLKKDCRINEMTFNILIDSL 465
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + ++I GY S + DALR+ M V P++++Y+ ++ GLC + + A EL
Sbjct: 183 NVVTYTALIDGYCRSGRLADALRLIASMPVA----PDTYTYNTVLKGLCCAKQWEQAEEL 238
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM R P+ ++ + + A NG ++ V+ L +M + D I Y T+++
Sbjct: 239 MREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSE 298
Query: 373 RGRAGEAMKLLKEL 386
GR EA+KLL +
Sbjct: 299 HGRVDEALKLLNTM 312
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+C P+ ++NIL ++ +G VY +QM GI PDIF+ N++I GY
Sbjct: 552 DCLPNEVTFNILISSLCQKGLVNRAIDVY--------EQMPKYGITPDIFTYNALINGYS 603
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
++DAL+ M P++ SY+ ++ GLC R K+A +L EM RK P+
Sbjct: 604 EQGRLDDALKFLSTMPCE----PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNE 659
Query: 326 KSY 328
++
Sbjct: 660 VTF 662
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 111/252 (44%), Gaps = 39/252 (15%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+Y+T++ F+E ++ A+ + M CRP+ YN G+ + +
Sbjct: 288 IYSTLVNGFSEHGRVDEALKLLNTML------CRPNTVCYNAALKGLCIAGRWEEVGELI 341
Query: 235 METIR-----------------C----------LFKQMVNDGIEPDIFSLNSMIKGYILS 267
E +R C + +QM G PD+ S N++I +
Sbjct: 342 AEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQ 401
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+DAL++ M P++ S++ ++ LC R +A EL +M +K + +
Sbjct: 402 ARADDALKLLKSMLCK----PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMT 457
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPV-DFITYRTVLDEICRRGRAGEAMKLLKEL 386
+N L+ +L NG+V++ ++ ++E++ K R + D +TY ++++ +G A L + +
Sbjct: 458 FNILIDSLCQNGQVKDAIE-VFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM 516
Query: 387 QNKNLIDGYTYT 398
+ I Y T
Sbjct: 517 PCRADIFSYNAT 528
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 117/265 (44%), Gaps = 22/265 (8%)
Query: 141 HIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMK 200
+I+ +KL A + + + V+ + A S +NT++ + L A V + +
Sbjct: 120 NILIKKLCARRRLADAERVLEALKA--SGAADAVSHNTLVAGYCRDGSLGDAERVVEAAR 177
Query: 201 NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM 260
S ++ +Y L + G+ + +R L M + PD ++ N++
Sbjct: 178 ASGT----ANVVTYTALIDGYCRSGR-------LADALR-LIASM---PVAPDTYTYNTV 222
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+KG + A + +M + + PN ++ I C G A EL ++M + G
Sbjct: 223 LKGLCCAKQWEQAEELMREM-IRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYG 281
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P Y++LV+ + +G V+E +K L M+ RP + + Y L +C GR E
Sbjct: 282 CTPDVIIYSTLVNGFSEHGRVDEALKLLNTML--CRP-NTVCYNAALKGLCIAGRWEEVG 338
Query: 381 KLLKELQNKNL-IDGYTYTKLLDVL 404
+L+ E+ K+ + T++ L++ L
Sbjct: 339 ELIAEMVRKDCPPNDATFSTLINSL 363
>gi|414865591|tpg|DAA44148.1| TPA: hypothetical protein ZEAMMB73_616668 [Zea mays]
Length = 838
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 34/263 (12%)
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
G ++N +I + KL A +F MK+ L +PS +YN L R K+T
Sbjct: 470 GKLLMFNDLILELCNSGKLDEAYEIFNQMKD---LGLKPSEFTYNSLLYGICRR-KDTSA 525
Query: 231 NHVYMETIR------------------CL----------FKQMVNDGIEPDIFSLNSMIK 262
+ +R CL M+ G PDI + ++ +
Sbjct: 526 AADLLREMRANAHKPWIKNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMN 585
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
G + +AL +F + YLP+ +++ LI+G G+ A+E+ +EM KG +
Sbjct: 586 GMCKVGDIENALGLFLDISS-KCYLPDVVAHNILINGFRKAGKFDEAQEIMEEMLSKGML 644
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
PS +YN ++ +G +++ + +++MI++++P +TY ++LD +C GR EA+ L
Sbjct: 645 PSVVTYNLMIDIWCKSGSIDKAITCVYKMIDEEKPPTVVTYTSLLDGLCNAGRPDEAIVL 704
Query: 383 LKELQNKNL-IDGYTYTKLLDVL 404
+++ K +G YT L++ L
Sbjct: 705 WCKMREKGCSPNGIAYTALVNGL 727
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 143/330 (43%), Gaps = 46/330 (13%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRK--LGAAKMYQEM------- 156
ELCN L E + ++ + K F +++ Y I RK AA + +EM
Sbjct: 481 ELCNSGKLDEAYEIFNQMKDLGLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKP 540
Query: 157 -----DDVVNQMLATPSFCGTEAL-----------------YNTIIYFFAEARKLSRAVY 194
D+V Q+ + TEAL Y+ + + + A+
Sbjct: 541 WIKNCTDMVQQLCLSGRI--TEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALG 598
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+F + + L P + ++NIL F GK + + + ++M++ G+ P +
Sbjct: 599 LFLDISSKCYL---PDVVAHNILINGFRKAGK--------FDEAQEIMEEMLSKGMLPSV 647
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N MI + S ++ A+ ++M + P +Y L+ GLC GR A L
Sbjct: 648 VTYNLMIDIWCKSGSIDKAITCVYKM-IDEEKPPTVVTYTSLLDGLCNAGRPDEAIVLWC 706
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M+ KG P+ +Y +LV+ L G +E V EM K +D + + + + +G
Sbjct: 707 KMREKGCSPNGIAYTALVNGLCKCGRMETAVNYYEEMKTKGFDLDIFSLLNLTNLLIAQG 766
Query: 375 RAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
+A + +LLK + K+++ + K++D++
Sbjct: 767 QASKGCELLKVVLQKDVVHN-NHLKMVDLV 795
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 9/184 (4%)
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+ +P+ S+NI+ K ++ L K MV G + + N +I
Sbjct: 432 DVKPNSDSFNIVVCGLCKVKK--------LDLALALTKDMVGLGCKGKLLMFNDLILELC 483
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
S +++A IF+QM + P+ F+Y+ L++G+C + T A +L EM+ P
Sbjct: 484 NSGKLDEAYEIFNQMKDL-GLKPSEFTYNSLLYGICRRKDTSAAADLLREMRANAHKPWI 542
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
K+ +V L L+G + E ++ L M+E D +TY ++ +C+ G A+ L +
Sbjct: 543 KNCTDMVQQLCLSGRITEALQFLDGMLELGFLPDIVTYSAAMNGMCKVGDIENALGLFLD 602
Query: 386 LQNK 389
+ +K
Sbjct: 603 ISSK 606
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 20/271 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ----EMDDVVNQMLATPSFCGTEALY 176
L+ F WA++QP FRH + + M L + D +V++ TP G
Sbjct: 85 LDFFRWAAEQPGFRHSCYSLNAMASLLPPHQRAHLDRLATDALVSRCSMTPGALGF---- 140
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
++ A A VF K + L C P+ +YN L A G+ E
Sbjct: 141 --LLRRLGAAGLPDTAARVFDAAKTT--LSCAPNSYTYNCLLDALAKAGRAEDAEARLQE 196
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ + V D ++L S+++ Y + DA + +M + L
Sbjct: 197 MVVTCGDESV------DRYTLTSLLQCYCNAGRPEDASAVLQRMS--KRAWVDEHVLTML 248
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I G+ ++A EL M+ P+ K+ + LV LA G V+ + +M
Sbjct: 249 IVAYSKWGKVEDAVELLGRMEALDMRPNEKTLSVLVHGLARQGRVDVAMNMFGKMASYGF 308
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
VD Y +++ +C G+A+KL ++++
Sbjct: 309 SVDLAMYSVLIEGLCHGNEMGKAVKLFEDMK 339
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 22/239 (9%)
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
+A+ F A+Y+ +I ++ +AV +F+ MK R P +R + AF
Sbjct: 303 MASYGFSVDLAMYSVLIEGLCHGNEMGKAVKLFEDMKRDR---ITPDVRLLKKIIEAFCR 359
Query: 224 RGKNTYI------NHVYMET------IRCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHV 270
+G + + N V+++ + ++N G +E L+SM++G V
Sbjct: 360 QGDFSTVGPFINENAVHLKPGSAVLLYNVILDGLINHGEVEAAYQLLSSMVRG---DQRV 416
Query: 271 NDALRI-FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+D + H + + PNS S++ ++ GLC + A L +M G +N
Sbjct: 417 SDDDTVGVHIFVITEDVKPNSDSFNIVVCGLCKVKKLDLALALTKDMVGLGCKGKLLMFN 476
Query: 330 SLVSALALNGEVEETVKNLWEMIE-KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
L+ L +G+++E + +M + +P +F TY ++L ICRR A LL+E++
Sbjct: 477 DLILELCNSGKLDEAYEIFNQMKDLGLKPSEF-TYNSLLYGICRRKDTSAAADLLREMR 534
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 12/284 (4%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LE+F W K F+ + LG + ++ + S+ Y ++I
Sbjct: 161 LEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLI 220
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ AR+ + +F+ M+ R + +YN++ + RG + + I+
Sbjct: 221 SILSRARRFDEGITLFETMQREGQ---RGNAVTYNVMLDLYGKRGDS-------WDRIQS 270
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF++M + I PD ++ N+MI I ++H +ALR+F +M PN +Y+ L+
Sbjct: 271 LFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEA-GCCPNRVTYNALLDVY 329
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
G K A EL EM+ G P+ +YN L++A A G +E ++ K D
Sbjct: 330 GKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDE 389
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDV 403
TY T++ R R +A++ E++ N TY L+D+
Sbjct: 390 FTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDI 433
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 28/269 (10%)
Query: 134 RHDASTYHIMTRKLGA--------AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
R +A TY++M G ++QEM D+ + YNT+I +
Sbjct: 245 RGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDL--------EISPDDYTYNTMITACIQ 296
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
A+ +F+ MK + C P+ +YN L + G + + + +E M
Sbjct: 297 NSHCQEALRLFQEMKEAG---CCPNRVTYNALLDVYGKGGMHKEASELLVE--------M 345
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
GI P+I + N +I Y + ++A + + + P+ F+Y LI R
Sbjct: 346 EAAGISPNIVTYNELIAAYARAGLCDEAAALKKSL-LSKGLCPDEFTYCTLISAFNRAER 404
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
+ A E EM++ P+ +YN L+ ++++ +K M EK D +T+ +
Sbjct: 405 YEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNS 464
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLIDG 394
+L G E + +E++ + G
Sbjct: 465 LLKSFGNCGMLTEVSNVFREMKRAGYMPG 493
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
Q+ ++G PDI N+MI + A+++ ++ P+ +Y+ L+ +
Sbjct: 625 QLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKA-QLKPDGVTYNCLMSMYGRE 683
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G A E+ EM+R G P+ +YN+L+ + +G +++ + +M+ + D T+
Sbjct: 684 GMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTF 743
Query: 364 RTVLDEICRRGRAGEAMKLLK----------ELQNKNLIDGY 395
T++ G EA+ +++ ++ K L+DGY
Sbjct: 744 NTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 785
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 135/358 (37%), Gaps = 84/358 (23%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY + A+ Y++ + +M TP+ YN +I + KL
Sbjct: 388 DEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNI----VTYNILIDIYGRMEKLDDM 443
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET--------------- 237
+ VFK+M+ C P + ++N L +F + G T +++V+ E
Sbjct: 444 MKVFKFMQEKN---CTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNIL 500
Query: 238 IRC------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
I C ++K ++ G++P + + +++ ++ +M
Sbjct: 501 IECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGL 560
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRK-------------------------- 319
L ++ + LIH G+ R+ DE+++
Sbjct: 561 QLSDA-CHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEA 619
Query: 320 ----------GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
G P K +N+++S A G +E VK L E+ + Q D +TY ++
Sbjct: 620 QLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSM 679
Query: 370 ICRRGRAGEAMKLLKEL----QNKNLIDG----YTYTK--LLDVLEDDFGNSIRHHLR 417
R G +A +++ E+ + NLI Y+YTK +D FG+ + +R
Sbjct: 680 YGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVR 737
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 86/233 (36%), Gaps = 47/233 (20%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
+ + L + C E Y T+I F A + +A+ F M R C P+I +YNIL
Sbjct: 375 ALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEM---RKTNCTPNIVTYNILI 431
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
+ Y ++ + +FK M PD+ + NS++K + + + +F
Sbjct: 432 --------DIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFR 483
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
EMKR G++P ++N L+
Sbjct: 484 ------------------------------------EMKRAGYMPGVDTFNILIECYGRC 507
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
G V+ +V ++ T+ ++ + R GR + K+ +E+ L
Sbjct: 508 GYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGL 560
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAE 185
++ + + D TY+ + G MY + ++V+++M P+ YNT++Y + +
Sbjct: 662 RKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLI----TYNTLLYSYTK 717
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
++ A VF M +R RP ++N L ++ S G +Y E + + + M
Sbjct: 718 HGRMDDAARVFGDMVAAR---VRPDNFTFNTLVGSYSSLG-------LYKEALS-VIEYM 766
Query: 246 VNDGIEPDIFSLNSMIKGY 264
G +P + +++ GY
Sbjct: 767 TEHGCQPTQITFKALLDGY 785
>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
Length = 642
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 13/219 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y+T+I F ++ ++ A+ V++ M S RP++ Y+ + + GK
Sbjct: 348 EFVYSTVITGFCKSGEIDCALKVWEAMVAS---PVRPNVVLYSAMIGGLANFGK------ 398
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
M LF++M++ P+I + S+I+GY + AL ++ +M + +PN+ S
Sbjct: 399 --MTEAELLFREMIHSKCAPNIITYGSIIQGYFKIGDTSRALSVWEEM-IGAGCVPNAVS 455
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+GLC GR K+A + M +G P + +Y S++ L ++G V+ ++ ++M+
Sbjct: 456 YSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDML 515
Query: 353 EKQRP-VDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
D I+Y +LD + AM LL + ++
Sbjct: 516 ASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQG 554
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 118/273 (43%), Gaps = 21/273 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + L A + +V++M+A EA +N ++ A + A +
Sbjct: 208 DKFTYSTVVSALADAGRVDDAVALVHEMVAD-GVVAAEA-FNPVLRAMLRAGDVKGAAKL 265
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F +M+ C P+ +YN+L L G+ V ++M +G+ P +
Sbjct: 266 FGFMQLK---GCVPTTATYNVLVHGLLVCGRAGAAMGV--------MRRMEREGVVPGVM 314
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ +++ G + V DA ++ +M G+ +N F Y +I G C G A ++
Sbjct: 315 TYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWN----EFVYSTVITGFCKSGEIDCALKV 370
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+ M P+ Y++++ LA G++ E EMI + + ITY +++ +
Sbjct: 371 WEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQGYFK 430
Query: 373 RGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
G A+ + +E+ + + +Y+ L++ L
Sbjct: 431 IGDTSRALSVWEEMIGAGCVPNAVSYSILINGL 463
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
Query: 209 PSIRSYNILF----TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
P++ S+N+L ++ + R Y++ +R L + + + PD F+ ++++
Sbjct: 164 PTLLSFNLLLKCVCSSLVPRDPGRYLD----VALRILHEIIPGWDLAPDKFTYSTVVSAL 219
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+ V+DA+ + H+M V + + + +++ ++ + G K A +L M+ KG VP+
Sbjct: 220 ADAGRVDDAVALVHEM--VADGVVAAEAFNPVLRAMLRAGDVKGAAKLFGFMQLKGCVPT 277
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ +YN LV L + G + + M + +TY V+D + R GR +A K+ +
Sbjct: 278 TATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAE 337
Query: 385 ELQNKNL 391
E++ L
Sbjct: 338 EMERNGL 344
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +II + + SRA+ V++ M + C P+ SY+IL + G+ +
Sbjct: 421 YGSIIQGYFKIGDTSRALSVWEEMIGA---GCVPNAVSYSILINGLCNVGR--------L 469
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ ++K M++ G PD + SMIKG +S V+ LR+F+ M + P+ SY+
Sbjct: 470 KDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNV 529
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
L+ GL A +L + M +G P + + N
Sbjct: 530 LLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCN 563
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 250 IEPDIFSLNSMIKGYILS-------NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
+ P + S N ++K S +++ ALRI H++ ++ P+ F+Y ++ L
Sbjct: 162 LAPTLLSFNLLLKCVCSSLVPRDPGRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALAD 221
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
GR +A L EM G V +++++N ++ A+ G+V+ K M K T
Sbjct: 222 AGRVDDAVALVHEMVADGVV-AAEAFNPVLRAMLRAGDVKGAAKLFGFMQLKGCVPTTAT 280
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
Y ++ + GRAG AM +++ ++ + ++ G TY ++D L
Sbjct: 281 YNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGL 323
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 14/270 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ +TY IM EM D++N M+A ++N +A+ + +A
Sbjct: 339 IKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN-GISPNHHIFNIFFSAYAKCGIIDKA 397
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F M R P SY L A G+ ++ F QM+N+G+ P
Sbjct: 398 MDIFNKM---RQQGLSPDAVSYGALIDALCKLGR--------VDDAEVKFNQMINEGVTP 446
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
DI +S++ G + +F +M V + PN ++ ++ LC +GR + L
Sbjct: 447 DIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIH-PNIVFFNTILCNLCKEGRVMEGQRL 505
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
D ++ G P SYN+L+ L G ++E K L M+ D +Y T+L C+
Sbjct: 506 VDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCK 565
Query: 373 RGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
GR A +++ + + G TY +L
Sbjct: 566 AGRIDSAYSHFRKMLSNGITPGVVTYNTIL 595
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 121/274 (44%), Gaps = 20/274 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYN 177
+++FN +Q DA +Y + L + + NQM+ TP +++
Sbjct: 398 MDIFN-KMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDI----VVFS 452
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
+++Y K + +F M N+ P+I +N + G+ +++
Sbjct: 453 SLVYGLCTVDKWEKVEELFFEM---LNVGIHPNIVFFNTILCNLCKEGR-VMEGQRLVDS 508
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
I C+ G+ PD+ S N++I G+ L+ +++A ++ M V P+SFSY+ L+
Sbjct: 509 IECM-------GVRPDVISYNTLIDGHCLAGTIDEASKLLEGM-VSVGLKPDSFSYNTLL 560
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
HG C GR +A +M G P +YN+++ L E + MI
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 620
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D TY +L+ +C+ EA+K+ + L +K L
Sbjct: 621 WDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGL 654
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 122/321 (38%), Gaps = 63/321 (19%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+R D + + L K E DV+ Q + YN ++ ++ A
Sbjct: 125 WRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEA 184
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI-------------- 238
+ + M + + C P++ SY+ + F + G+ ++++E +
Sbjct: 185 LELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTV 244
Query: 239 -------------RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+F+QM+++G++P+I + N +I GY+ + +R+ +M
Sbjct: 245 IDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSA-GG 303
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE-- 343
PN +Y L++ LC GR + AR D M KG PS +Y ++ A G + E
Sbjct: 304 PKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMH 363
Query: 344 -----------------------------TVKNLWEMIEKQR----PVDFITYRTVLDEI 370
+ ++ K R D ++Y ++D +
Sbjct: 364 DLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDAL 423
Query: 371 CRRGRAGEAMKLLKELQNKNL 391
C+ GR +A ++ N+ +
Sbjct: 424 CKLGRVDDAEVKFNQMINEGV 444
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 12/231 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC---RPSIRSYNILFTAFLSRGKNTYI 230
++ I++F L + V + + ++EC RP + SYN L G
Sbjct: 478 GIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGT---- 533
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
++ L + MV+ G++PD FS N+++ GY + ++ A F +M + P
Sbjct: 534 ----IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKM-LSNGITPGV 588
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y+ ++HGL R A+EL M G +YN +++ L + V+E +K
Sbjct: 589 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQN 648
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
+ K ++ IT+ ++ + + GR +AM L + L+ +L+
Sbjct: 649 LCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLV 699
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
V +F M ++ P+ +Y+IL F G ++ H + F ++ G
Sbjct: 75 VVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMG---HLEHGFAA-----FGLILKTGWR 126
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
D +N ++ G V +A+ + Q +P++ SY+ L+ GLC + R + A E
Sbjct: 127 MDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALE 186
Query: 312 LCDEMKRKGF---VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
L M P+ SY+++++ G+V++ EM+++ P D +TY TV+D
Sbjct: 187 LLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVID 246
Query: 369 EICR 372
+C+
Sbjct: 247 GLCK 250
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 98/224 (43%), Gaps = 19/224 (8%)
Query: 185 EARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQ 244
+AR++ A +F+ M P + +YN + G+ + +Y+
Sbjct: 803 KARRIDDAYSLFREMLMK---GLTPDVVTYNTILHGLFQTGRFSEAKELYL--------S 851
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLC 301
M+N + +I++ N ++ G SN V++A ++F + G+ N + +++ +I L
Sbjct: 852 MINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNII----TFNIMIGALL 907
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
GR ++A +L + G VP +Y + L G +EE M + P+D
Sbjct: 908 KGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSR 967
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
++ + +RG A L +L KN ++ T ++L+ +
Sbjct: 968 LLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLF 1011
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 18/187 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTI++ + ++ S A ++ M NS + I +YNI+ K+ ++
Sbjct: 591 YNTILHGLFQTKRFSEAKELYLNMINSGT---KWDIYTYNIILNGLC---KSNCVD---- 640
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
E I+ +F+ + + G++ +I + N MI + DA+ +F + G+V N + +
Sbjct: 641 EAIK-MFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVV----T 695
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y ++ L +G + L M++ G P+S+ N+LV L G++ L ++
Sbjct: 696 YRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLD 755
Query: 353 EKQRPVD 359
E+ V+
Sbjct: 756 ERNFSVE 762
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTI++ + + S A ++ M NSR + +I +YNI+ K+ ++ +
Sbjct: 829 YNTILHGLFQTGRFSEAKELYLSMINSRT---QMNIYTYNIILNGLC---KSNCVDEAFK 882
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+F+ + + G++ +I + N MI + DA+ +F + +P+ +Y
Sbjct: 883 -----MFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI-PANGLVPDVVTYRL 936
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+ L +G + L M++ G S+ N+LV L G++ L ++ EK
Sbjct: 937 VAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEK 995
>gi|356534139|ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Glycine max]
Length = 480
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 115/244 (47%), Gaps = 22/244 (9%)
Query: 122 ELFNWASKQ---PRFRHDASTYHIMTR---KLGAAKMYQEMDDVVNQMLATPSFCGTEAL 175
+L W +Q F D TY+I+ +LG + + D + + +P F
Sbjct: 243 KLIEWVYQQLLLDGFSSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDF----HT 298
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +++ + K A+ + +M R + P++ + L LSR N +
Sbjct: 299 FNILLHVLGKGDKPLAALNLLNHM---REMGIEPTVLHFTTLIDG-LSRAGN-------L 347
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + F +M+ +G PD+ + MI GY+++ + AL+++ M + +PN F+Y+
Sbjct: 348 DACKYFFDEMIKNGCIPDVVAYTVMITGYVVAGEIEKALKMYQYM-ISREQVPNVFTYNS 406
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC G+ A + EMK KG P+S YN+L S L G+ + + + +M EK
Sbjct: 407 IIQGLCMAGKFDEACSMLKEMKTKGCSPNSFVYNTLASCLRNAGKTADAHEVIRQMTEKG 466
Query: 356 RPVD 359
+ D
Sbjct: 467 KYAD 470
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 128/299 (42%), Gaps = 38/299 (12%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
+ F W S+Q ++H + YH++ + ++ + +V++M+ T +N +I
Sbjct: 141 KFFVWCSQQEGYQHTVNAYHLVMNIYAECEEFKALWRLVDEMVEK-GLPATARTFNILIR 199
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY------- 234
EA L++++ V +++K S+ RP SYN + L + I VY
Sbjct: 200 TCGEA-GLAKSL-VERFIK-SKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQLLLDG 256
Query: 235 --------------------METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
++ L +M +G PD + N ++ + AL
Sbjct: 257 FSSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAAL 316
Query: 275 RIFH---QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
+ + +MG+ P + LI GL G + DEM + G +P +Y +
Sbjct: 317 NLLNHMREMGIE----PTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNGCIPDVVAYTVM 372
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
++ + GE+E+ +K MI +++ + TY +++ +C G+ EA +LKE++ K
Sbjct: 373 ITGYVVAGEIEKALKMYQYMISREQVPNVFTYNSIIQGLCMAGKFDEACSMLKEMKTKG 431
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 108/263 (41%), Gaps = 13/263 (4%)
Query: 128 SKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEAR 187
SK FR +Y+ + L Y+ ++ V Q+L F YN ++Y
Sbjct: 217 SKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQLL-LDGFSSDILTYNIVMYAKYRLG 275
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL + + M RN P ++NIL L +G L M
Sbjct: 276 KLDQFHRLLDEM--GRN-GFSPDFHTFNILLHV-LGKGDKPL-------AALNLLNHMRE 324
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GIEP + ++I G + ++ DA + F + +P+ +Y +I G G +
Sbjct: 325 MGIEPTVLHFTTLIDGLSRAGNL-DACKYFFDEMIKNGCIPDVVAYTVMITGYVVAGEIE 383
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A ++ M + VP+ +YNS++ L + G+ +E L EM K + Y T+
Sbjct: 384 KALKMYQYMISREQVPNVFTYNSIIQGLCMAGKFDEACSMLKEMKTKGCSPNSFVYNTLA 443
Query: 368 DEICRRGRAGEAMKLLKELQNKN 390
+ G+ +A ++++++ K
Sbjct: 444 SCLRNAGKTADAHEVIRQMTEKG 466
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-----YN 177
F WA+++ F HD+ TY+ M L + ++ M V+ +M GT+ L +
Sbjct: 180 FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-------GTKGLLTMETFT 232
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSR------NLEC------RPSI-RSYNILFTAFLSR 224
+ FA A++ +AV +F+ MK + + C R + + +LF R
Sbjct: 233 IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER 292
Query: 225 GKNTYINHVYMETIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ + + C ++ M++ G++PDI + N M++G + S +DA+
Sbjct: 293 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 352
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
++FH M PN SY +I C Q + A E D+M G P + Y L++
Sbjct: 353 KLFHVMKS-KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+++ + L EM EK P D TY ++
Sbjct: 412 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 444
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 18/220 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I F + + A+ F M +S +P Y L T F ++ K +
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDS---GLQPDAAVYTCLITGFGTQKK--------L 418
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
+T+ L K+M G PD + N++IK RI+++M + N + P+ +++
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM--IQNEIEPSIHTFN 476
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ + R + DEM +KG P SY L+ L G+ E + L EM++K
Sbjct: 477 MIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 536
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
I Y + R G+ ++ +EL + G
Sbjct: 537 GMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAKFSG 572
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 17/186 (9%)
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
DD+V+ L + A+Y +I F +KL + K M+ + P ++YN
Sbjct: 391 DDMVDSGLQPDA-----AVYTCLITGFGTQKKLDTVYELLKEMQEKGH---PPDGKTYNA 442
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
L ++ + +Y +M+ + IEP I + N ++K Y ++ + +
Sbjct: 443 LIKLMANQKMPEHGTRIY--------NKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 494
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
+ +M + P+ SY LI GL ++G+++ A +EM KG YN +
Sbjct: 495 WDEM-IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFH 553
Query: 337 LNGEVE 342
G+ E
Sbjct: 554 RGGQPE 559
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 17/284 (5%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ +D V L F W +QP F HD TY M LG AK + ++ +++QM+
Sbjct: 353 VLKQLQDHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVK--DG 410
Query: 170 CGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
C + YN +I+ + A L+ AV VF M+ + C P +Y L G
Sbjct: 411 CQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQ---RVGCEPDRVTYCTLIDIHAKAG--- 464
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
+++ ++++M G+ PD F+ + +I + H+ A ++F +M V +P
Sbjct: 465 -----FLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEM-VEQGCVP 518
Query: 289 NSFSYDYLIHGLCAQGRT-KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
N +Y+ +I L A+ R ++A +L +M+ GF P +Y+ ++ L G ++E
Sbjct: 519 NLVTYNIMI-ALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAV 577
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
EM K D Y ++D + G +A + + + N L
Sbjct: 578 FSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGL 621
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 21/257 (8%)
Query: 131 PRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEAR 187
P R +A +Y + R L A++ E ++ M A+ G A Y T+I +A
Sbjct: 117 PAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQAS----GVRADVVTYGTLIRGLCDAS 172
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L A+ + M S +P++ Y+ L + G+ + V F+ M
Sbjct: 173 ELDAALELLDEMCGS---GVQPNVVVYSCLLRGYCRSGRWQDVGKV--------FEDMSR 221
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI+PD+ +I A ++ M V PN +Y+ LI+ LC +G +
Sbjct: 222 RGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMM-VQRGLEPNVVTYNVLINSLCKEGSVR 280
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRT 365
A L EM KG P +YN+L++ L+ E++E + L EMI+ V D +T+ +
Sbjct: 281 EALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNS 340
Query: 366 VLDEICRRGRAGEAMKL 382
V+ +C+ GR +A+K+
Sbjct: 341 VIHGLCKIGRMTQAVKV 357
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ +R+ AV + + M+ S R + +Y L + +
Sbjct: 126 YTTVMRGLCASRRTGEAVALLRSMQAS---GVRADVVTYGTLIRGLCDASE--------L 174
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L +M G++P++ + +++GY S D ++F M P+ +
Sbjct: 175 DAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSR-RGIKPDVIMFTG 233
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI LC +G+T A ++ D M ++G P+ +YN L+++L G V E + EM +K
Sbjct: 234 LIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKG 293
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D +TY T++ + EAM L+E+ + +
Sbjct: 294 VAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTV 330
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L + M G+ D+ + ++I+G ++ ++ AL + +M PN Y L+ G
Sbjct: 145 LLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEM-CGSGVQPNVVVYSCLLRGY 203
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C GR ++ ++ ++M R+G P + L+ L G+ + K M+++ +
Sbjct: 204 CRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNV 263
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL----DVLEDD 407
+TY +++ +C+ G EA+ L KE+ +K + D TY L+ VLE D
Sbjct: 264 VTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMD 315
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 125/290 (43%), Gaps = 45/290 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D TY+ + L E + +M+ + + + +N++I+ + ++++AV
Sbjct: 297 DVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVK 356
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
V + M C ++ +YN L FL ++ V M L ++ G+EPD
Sbjct: 357 VREMMAER---GCMCNLVTYNYLIGGFLR------VHKVKMAM--NLMDELAISGLEPDS 405
Query: 255 FSLNSMIKGYILSNHVNDA---LRIFHQMGV---VYNYLP-------------------- 288
F+ + +I G+ V+ A L Q G+ +++Y+P
Sbjct: 406 FTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNE 465
Query: 289 -------NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
++ +Y +IHG C G K ++L +M +G P + +Y+ L++ A G++
Sbjct: 466 MDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDL 525
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
EE + L +M D + +++ G+ + +KL+ E++ KN+
Sbjct: 526 EEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNV 575
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 14/228 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + + A+ + K M + P + +YN L A LS + M
Sbjct: 266 YNVLINSLCKEGSVREALTLRKEMDDK---GVAPDVVTYNTLI-AGLS-------GVLEM 314
Query: 236 ETIRCLFKQMVNDG--IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ ++M+ +EPD+ + NS+I G + A+++ +M + N +Y
Sbjct: 315 DEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKV-REMMAERGCMCNLVTY 373
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+YLI G + K A L DE+ G P S +Y+ L++ + EV+ K L M +
Sbjct: 374 NYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQ 433
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
+ + Y +L +C++G AM L E+ +D Y+ ++
Sbjct: 434 RGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMI 481
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARK--LSRA 192
D+ TY I+ G +KM++ D + L T G +A L++ I A ++ + RA
Sbjct: 404 DSFTYSILIN--GFSKMWEV--DRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERA 459
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F M + C +Y+ + G M+T++ L + M+++G+ P
Sbjct: 460 MGLFNEMDKN----CGLDAIAYSTMIHGACKSGD--------MKTVKQLIQDMLDEGLAP 507
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D + + +I Y + +A R+ QM ++P+ +D LI G A+G+T +L
Sbjct: 508 DAVTYSMLINMYAKLGDLEEAERVLKQM-TASGFVPDVAVFDSLIKGYSAEGQTDKVLKL 566
Query: 313 CDEMKRKGFVPSSKSYNSLV 332
EM+ K K ++++
Sbjct: 567 IHEMRAKNVAFDPKIISTII 586
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 121/279 (43%), Gaps = 25/279 (8%)
Query: 118 LVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVN-----QMLATPSFCGT 172
L+ F W+ KQ + H YH+M + Y+ M D++N +ML +FC
Sbjct: 80 LLAYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMMKKKMLNVETFC-- 137
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
++ +A A+K+ A+Y F M+ + P++ ++N L +A L + KN
Sbjct: 138 -----IVMRKYARAQKVDEAIYAFNVMEK---YDLPPNLVAFNGLLSA-LCKSKNVRKAQ 188
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
E +R D PD + + +++G+ ++ A +F +M V LP+ +
Sbjct: 189 EIFENMR--------DRFTPDSKTYSILLEGWGKEPNLPKAREVFREM-VDAGSLPDIVT 239
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y ++ LC GR A + M P++ Y+ LV +EE V EM
Sbjct: 240 YSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEME 299
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D + +++ C+ R ++LKE+++K +
Sbjct: 300 RSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGV 338
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-TEALYNTIIYFFAEARKLSRAVY 194
D TY IM L A E +V M PS C T +Y+ +++ + +L AV
Sbjct: 236 DIVTYSIMVDILCKAGRVDEALGIVRSM--DPSICKPTTFIYSVLVHTYGTETRLEEAVD 293
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAF--LSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
F M+ S + + +N L AF +R KN Y + K+M + G+ P
Sbjct: 294 TFLEMERS---GMKADVAVFNSLIGAFCKTNRMKNVYR----------VLKEMKSKGVTP 340
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ S N +++ I ++A +F +M V P++ +Y +I C + + A ++
Sbjct: 341 NSKSCNIILRHLIDRGEKDEAFDVFRKMIKVCE--PDADTYTMMIKMFCEKKEMETADKV 398
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
M++KG PS +++ L++ L ++ L EMIE
Sbjct: 399 WKYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEMIE 439
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 139/310 (44%), Gaps = 45/310 (14%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV--VNQMLATPSFCG 171
+ D + LE F + F+H TY +M KL + + EMD V + Q +
Sbjct: 53 EHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASER---EMDCVQYLLQQMKLEGISC 109
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
+E L+ ++I + A +A+ F M++ R +P+++ YN + A L + IN
Sbjct: 110 SEDLFISVIGSYRRAGSSEQALKTFYRMQDFR---VKPTVKIYNHILDALLDENRFQMIN 166
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG---------- 281
+Y M DG+EP++F+ N ++K +N V+ A ++ +M
Sbjct: 167 PIY--------SNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVS 218
Query: 282 -------------------VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
+ ++ P+ Y+ LI+G+C + + A +L DEM KG
Sbjct: 219 YTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P+ SY ++++AL+ G VE ++ L +M + + T+ +++ +G + EA+
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDF 338
Query: 383 LKELQNKNLI 392
+ + ++
Sbjct: 339 WDRMIREGVV 348
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 14/264 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
Y+ + L + + + V NQM C Y+ +I +A+A L A V+ +
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQM-EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M C P++ +Y + +N+ N Y CL + M + P+ + N
Sbjct: 412 MITHG---CHPNVVAYTCMVDVLC---RNSMFNQAY-----CLIENMQVENCPPNTVTFN 460
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+ IKG S V+ A+++F QMG PN+ +Y+ L+ L R A L +M+
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGN-SGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEH 519
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G + +YN+++ G + E ++ L +M+ + D IT V+D C++G+
Sbjct: 520 RGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNI 579
Query: 379 AMKLLKELQ-NKNLIDGYTYTKLL 401
A++L+ L K D YT L+
Sbjct: 580 AIQLMDRLSAGKWHPDIIAYTSLI 603
>gi|356560456|ref|XP_003548508.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g77405-like [Glycine max]
Length = 477
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 128/311 (41%), Gaps = 38/311 (12%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY 176
PL LE F+W + F H T + L A + + + +P T A
Sbjct: 141 PLKALEFFHWLESRFNFPHSEPTCRELACLLARATALKPLWHFLKH---SPHV--TTATV 195
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
+I +E A+ F MK R CRP SYN L A G
Sbjct: 196 TCLIKLLSEQGLADEALLTFHRMKQFR---CRPDTHSYNTLIHALCRVGN--------FA 244
Query: 237 TIRCLFKQMVNDGIE--PDIFSLNSMIKGY----ILSN-------HVNDALRIFHQMGVV 283
R + +QM G PD F+ + +I Y IL+ + +A R+F M +
Sbjct: 245 KARSILQQMELPGFRCPPDTFTYSILISSYCRHGILTGCWKATRRRIYEAGRLFRLM-LF 303
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+P+ +Y+ LI G C R + A EL D+MKR G VP+ +Y VS E+++
Sbjct: 304 RKLVPDVVTYNALIDGCCKTLRMERALELFDDMKRSGVVPNRVTYGCFVSYYCAVNEIDK 363
Query: 344 TVKNLWEMIEKQRPVDFIT----YRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYT 398
V+ L EM QR D + Y ++ +C GR EA L EL + ++ YTY
Sbjct: 364 GVEMLREM---QRLGDGVASSSLYTPIIHALCEAGRVVEACGFLVELVEGGSMPREYTYG 420
Query: 399 KLLDVLEDDFG 409
+ D + G
Sbjct: 421 LVCDXAAGEGG 431
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 97/258 (37%), Gaps = 40/258 (15%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF-CGTEALYNTIIY------ 181
KQ R R D +Y+ + L + + ++ QM P F C + +I+
Sbjct: 219 KQFRCRPDTHSYNTLIHALCRVGNFAKARSILQQM-ELPGFRCPPDTFTYSILISSYCRH 277
Query: 182 ------FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ A R++ A +F+ M + + P + +YN L + + M
Sbjct: 278 GILTGCWKATRRRIYEAGRLFRLMLFRKLV---PDVVTYNALI--------DGCCKTLRM 326
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF M G+ P+ + + Y N ++ + + +M + + + +S Y
Sbjct: 327 ERALELFDDMKRSGVVPNRVTYGCFVSYYCAVNEIDKGVEMLREMQRLGDGVASSSLYTP 386
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG---------------E 340
+IH LC GR A E+ G +P +Y + A G
Sbjct: 387 IIHALCEAGRVVEACGFLVELVEGGSMPREYTYGLVCDXAAGEGGLFEDGDGYGDGMHKR 446
Query: 341 VEETVKNLWEMIEKQRPV 358
+++ + N + I K +PV
Sbjct: 447 IKDGIWNRYRQIMKVKPV 464
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 110/216 (50%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ A + +A + M ++ +C ++NIL F G + + +
Sbjct: 333 YNTVLKGLCSAERWEQAEELLAEMFDN---DCPLDDVTFNILVDFFCQNG----LVYRVI 385
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L +QM+ G PD+ + ++I G+ +++A+ + M PN+ SY
Sbjct: 386 E----LLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAAC-GCRPNTISYTI 440
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC+ R +A +L +M +G P+ ++N++++ L G VE+ ++ L +M+
Sbjct: 441 VLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNG 500
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D I+Y TV+D + + G+ EA++LL + NK +
Sbjct: 501 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGM 536
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ A++ R V M+ + C P++ ++N L +L R N ++
Sbjct: 228 YNAVLKGLCMAKRWGR---VQDLMEEMVRVGCPPNVVTFNTLI-GYLCR------NGLF- 276
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + + QMV+ G PDI +++ G H+ A I +M Y PN Y+
Sbjct: 277 ERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS-YGLKPNVVCYNT 335
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC+ R + A EL EM ++N LV NG V ++ L +M+E
Sbjct: 336 VLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHG 395
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D ITY TV++ C+ G EA+ LLK +
Sbjct: 396 CVPDVITYTTVINGFCKEGLIDEAVMLLKSM 426
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 115/259 (44%), Gaps = 13/259 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ + Y+ + + L +A+ +++ ++++ +M + +N ++ FF + + R
Sbjct: 326 LKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPL-DDVTFNILVDFFCQNGLVYRV 384
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + + M C P + +Y + F G I+ M L K M G P
Sbjct: 385 IELLEQMLEH---GCVPDVITYTTVINGFCKEG---LIDEAVM-----LLKSMAACGCRP 433
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ S ++KG + DA + QM + PN +++ +I+ LC +G + A EL
Sbjct: 434 NTISYTIVLKGLCSAERWVDAEDLMSQM-IEQGCSPNPVTFNTVINFLCKKGLVEQAIEL 492
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+M G P SY++++ L G+ +E ++ L M+ K + I Y ++ + +
Sbjct: 493 LKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSK 552
Query: 373 RGRAGEAMKLLKELQNKNL 391
GR +++ +Q+ +
Sbjct: 553 EGRINRVIQMFDNIQDVTI 571
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 182 FFAEARKL---SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
+F R L R + R C P Y+++ A SRG + +
Sbjct: 118 YFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGG----FRSAV 173
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYI-LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
R L + + G D+ + N ++ V++ALR+ + + P+ SY+ ++
Sbjct: 174 RVL-QDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GLC R ++L +EM R G P+ ++N+L+ L NG E + L +M++
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D Y TVLD +C+ G A ++L + + L
Sbjct: 293 PDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGL 326
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 31/242 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
Y T+I F + + AV + K M CRP+ SY I+ S +
Sbjct: 403 YTTVINGFCKEGLIDEAVMLLKSMAAC---GCRPNTISYTIVLKGLCSAERWVDAEDLMS 459
Query: 227 --------------NTYINHV----YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
NT IN + +E L KQM+ +G PD+ S +++I G +
Sbjct: 460 QMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAG 519
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++AL + + M V PN+ Y + L +GR ++ D ++ + Y
Sbjct: 520 KTDEALELLNVM-VNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLY 578
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+++S+L G + ++ L M+ + TY ++ + G EA ++L EL +
Sbjct: 579 NAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCS 638
Query: 389 KN 390
K
Sbjct: 639 KG 640
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+M+ GY + + A R+ + V PN+++Y ++ LCA+GR +A + DEM+
Sbjct: 87 NAMVSGYCRAGQLASARRLAASVPVP----PNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 318 RKGFVPSSKSYNSLVSALA---LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
R+G P Y+ ++ A G V+ L ++ + +D VL+ +C +G
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 375 RA-GEAMKLLKEL 386
+ EA++LL++L
Sbjct: 203 GSVDEALRLLRDL 215
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 23/270 (8%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
+TY+ + L +E D++ +++ TP Y ++I + ++ A
Sbjct: 295 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV----VTYTSLIDGLGKEKRSFEAYK 350
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+FK M SR L Y L L GK + VY K M + G PD+
Sbjct: 351 LFKEMA-SRGLAL--DTVCYTALIRGLLQTGKIPQASSVY--------KTMTSHGCVPDV 399
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+L++MI G + + A+RIF M PN Y LIHGLC + A E+
Sbjct: 400 VTLSTMIDGLSKAGRIGAAVRIFKSMEA-RGLAPNEVVYSALIHGLCKARKMDCALEMLA 458
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+MK+ P + +YN L+ L +G+VE EM+E D TY ++ +C+ G
Sbjct: 459 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAG 518
Query: 375 RAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
A +L ++ + + Y+ L+D L
Sbjct: 519 NTDAACGVLDDMSSSR----FVYSSLVDGL 544
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y+ +I+ +ARK+ A+ + MK + C P +YNIL G
Sbjct: 434 EVVYSALIHGLCKARKMDCALEMLAQMKKAF---CTPDTITYNILIDGLCKSGD------ 484
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+E R F +M+ G +PD+++ N +I G + + + A GV+ + + F
Sbjct: 485 --VEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAAC------GVLDDMSSSRFV 536
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y L+ GLC G+ + L EM+R G V +S++ L+ L V+E V +L+ I
Sbjct: 537 YSSLVDGLCKSGKLEGGCMLFHEMERSG-VANSQTRTRLIFHLCKANRVDEAV-SLFNAI 594
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLD 402
K+ Y +++ + + G+ E + +E+ D TY LL+
Sbjct: 595 RKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTRWWKPDRVTYNALLN 644
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 33/284 (11%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDV-----VNQMLATPSFCGTEALY--NTIIYFFA 184
R R + ST ++ K++Q + D + Q L++P F +++ N ++ FA
Sbjct: 78 RLRREISTDAVV-------KIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFA 130
Query: 185 EARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF-LSRGKNTYINHVYMETIRCLFK 243
++ A +KN RP + ++N+L T + L+R E + +
Sbjct: 131 RTKRHREA---GNLLKNELATIFRPDVETWNVLITGYCLAREP---------EEAFAVIR 178
Query: 244 QMVND-GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHGLC 301
+M D G+ P + + N ++ G S V A+ F V +P ++ ++ LI+GL
Sbjct: 179 EMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE---AVRRSMPVSAATFSILINGLV 235
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G A L E G +Y ++V+ LA N +++E V + ++
Sbjct: 236 KAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIA 295
Query: 362 TYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
TY +L+ +C+ GR EA+ LL+++ N D TYT L+D L
Sbjct: 296 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 339
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 118/307 (38%), Gaps = 60/307 (19%)
Query: 136 DASTYHIMTRKLGAAK----MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D TY + LG K Y+ ++ ++ LA + C Y +I + K+ +
Sbjct: 328 DVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVC-----YTALIRGLLQTGKIPQ 382
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A V+K M + C P + + + + G+ +R +FK M G+
Sbjct: 383 ASSVYKTMTSH---GCVPDVVTLSTMIDGLSKAGR-------IGAAVR-IFKSMEARGLA 431
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P+ +++I G + ++ AL + QM + P++ +Y+ LI GLC G + AR
Sbjct: 432 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAF-CTPDTITYNILIDGLCKSGDVEAARA 490
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
DEM G P +YN L+S L G + L +M + Y +++D +C
Sbjct: 491 FFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR-----FVYSSLVDGLC 545
Query: 372 RRG----------------------------------RAGEAMKLLKELQNKNLIDGYTY 397
+ G R EA+ L ++ + + Y Y
Sbjct: 546 KSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAY 605
Query: 398 TKLLDVL 404
++ L
Sbjct: 606 NSIISAL 612
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 139/351 (39%), Gaps = 36/351 (10%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRF--RHDASTYHIMTRKLGAAK 151
A+ L + + + + +D + ELF S PRF +H T + + K
Sbjct: 75 ALDRLRREISTDAVVKIFQCLKDADLAWELFQCLS-SPRFGFQHSVHTGNALLDVFARTK 133
Query: 152 MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
++E +++ LAT E +N +I + AR+ A V + M+ + PS+
Sbjct: 134 RHREAGNLLKNELATIFRPDVET-WNVLITGYCLAREPEEAFAVIREMEE--DFGVAPSL 190
Query: 212 RSYNILFTAFLSRGK--------------------------NTYINHVYMETIRCLFKQM 245
+++N++ GK N + M L ++
Sbjct: 191 KTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQET 250
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
+G DI + +++ + + +A+ + ++ P +Y+ L++GLC GR
Sbjct: 251 TTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKI-TANGCTPTIATYNALLNGLCKMGR 309
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
+ A +L ++ G P +Y SL+ L E K EM + +D + Y
Sbjct: 310 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTA 369
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLEDD--FGNSIR 413
++ + + G+ +A + K + + + D T + ++D L G ++R
Sbjct: 370 LIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVR 420
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
+I F E SR VF Y L +P++ ++ L RG I +
Sbjct: 272 MISTFCEKGFASR---VFWYFDKWVELGLKPNLINFTSLINGLCKRGS---IKQAFE--- 322
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
+ ++MV G +P++++ ++I G A R+F ++ +Y PN +Y +IH
Sbjct: 323 --MLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIH 380
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G C + + A L MK +G VP++K+Y L+ + G E+ + + M ++
Sbjct: 381 GYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSA 440
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ TY +D +C++GR EA KLLK+ L D TYT L+ L
Sbjct: 441 NIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISEL 487
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 17/242 (7%)
Query: 151 KMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
K Y+ MD ++ F YN F K R + K +K L +
Sbjct: 425 KAYELMD-----LMGKEGFSANIFTYNA---FIDSLCKKGRFLEACKLLKKGFRLGLQAD 476
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+Y IL + L R +T V+ F +M G++PD+ + N++I + +
Sbjct: 477 TVTYTILISE-LCRRADTREALVF-------FSKMFKAGVQPDMHTYNTLIAAFSRQRRM 528
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
++ ++F + V +P +Y +I G C A + + M G P S +Y +
Sbjct: 529 EESEKLFAE-AVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGA 587
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+S L +++E + M++K +T T+ E C++ + AM +L+ L K
Sbjct: 588 LISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDKKL 647
Query: 391 LI 392
I
Sbjct: 648 WI 649
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
++K R+ + +P++ +Y + + K +N M L +M G+ P+ +
Sbjct: 359 FLKLVRSDDYKPNVHTYTSMIHGYCKEDK---LNRAEM-----LLSRMKEQGLVPNTKTY 410
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
+I G+ + + A + MG + N F+Y+ I LC +GR A +L +
Sbjct: 411 TCLIDGHSKAGNFEKAYELMDLMGK-EGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGF 469
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
R G + +Y L+S L + E + +M + D TY T++ R+ R
Sbjct: 470 RLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRME 529
Query: 378 EAMKLLKELQNKNLIDGY-TYTKLL 401
E+ KL E L+ TYT ++
Sbjct: 530 ESEKLFAEAVGLGLVPTKETYTSMI 554
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 121/310 (39%), Gaps = 67/310 (21%)
Query: 99 PPRFNNEELCNV---MTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQE 155
P +E+ V + + +V L FNWA P+FR+ Y + + ++
Sbjct: 100 PDSLTHEQAITVVASLASEAGSMVALSFFNWAIGFPKFRYFMRFYIVCATSFIGNENFER 159
Query: 156 MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
+V++ M + FAE K AV + M+N +
Sbjct: 160 AHEVMDCM----------------VRVFAEIGKFQEAVNMVIEMEN------------HG 191
Query: 216 ILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
++ T + T+ C+ G+ ++ + GY + +V D +R
Sbjct: 192 LVLT---------------VRTLNCV------TGVAGEM-----GLVGY--AENVFDEMR 223
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+ GV P+S SY + C GR + +M R+GFV + + ++S
Sbjct: 224 V---RGVC----PDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTF 276
Query: 336 ALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDG 394
G + +E + I + ++++ +C+RG +A ++L+E+ K +
Sbjct: 277 CEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNV 336
Query: 395 YTYTKLLDVL 404
YT+T L+D L
Sbjct: 337 YTHTALIDGL 346
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 17/280 (6%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
+D V + F W +QP F HD TY M LG A+ + ++ ++ QM+ C
Sbjct: 361 QDHSVAVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVK--DGCQPNV 418
Query: 175 L-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+ YN +I+ + A L A+ VF M+ + C P +Y L G
Sbjct: 419 VTYNRLIHSYGRANYLREALNVFNQMQ---EMGCEPDRVTYCTLIDIHAKAG-------- 467
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+++ ++++M G+ PD F+ + MI S +++ A R+F +M V +PN +Y
Sbjct: 468 FLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEM-VDQGCVPNIVTY 526
Query: 294 DYLIHGLCAQGRT-KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ LI L A+ R + A EL +M+ GF P +Y+ ++ L G +EE +EM
Sbjct: 527 NILI-ALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMR 585
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ D Y ++D + G +A + + L+
Sbjct: 586 QNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLL 625
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
I L +QMV DG +P++ + N +I Y +N++ +AL +F+QM + P+ +Y L
Sbjct: 401 AINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEM-GCEPDRVTYCTL 459
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I G A + + M+ G P + +Y+ +++ L +G + + EM+++
Sbjct: 460 IDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGC 519
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +TY ++ + A++L +++QN D TY+ +++VL
Sbjct: 520 VPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVL 568
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 22/268 (8%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A MY+ M +V L+ +F Y+ +I ++ LS A +F M + C
Sbjct: 472 AMSMYERMQEV---GLSPDTFT-----YSVMINCLGKSGNLSAAHRLFCEMVDQ---GCV 520
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+I +YNIL A ++ +N +T L++ M N G +PD + + +++
Sbjct: 521 PNIVTYNILI-ALQAKARN-------YQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCG 572
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ +A +F +M + ++P+ Y L+ G + A E M R G +P+ +
Sbjct: 573 YLEEAEAVFFEMRQNH-WVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTC 631
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
NSL+SA + + L M+ TY T+L C ++ M EL
Sbjct: 632 NSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTY-TLLLSCCTEAQSPYDMGFCCELMA 690
Query: 389 KNLIDGYTYTKLLDVLEDDFGNSIRHHL 416
+ + + + + D G ++R H+
Sbjct: 691 VSGHPAHAFLQSMPAAGPD-GQNVRDHV 717
>gi|125587689|gb|EAZ28353.1| hypothetical protein OsJ_12331 [Oryza sativa Japonica Group]
Length = 556
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 13/231 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
YN I+ F + R+L ++ +F MK + + P I ++N L A + + VY
Sbjct: 12 FYNICIHAFGKWRRLDMSLKLFAAMKTA-SPPLVPDICTHNSLIRALVVGARVADALVVY 70
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
E M + GIEPD+F+ +++ G S ++DALR+F +M Y ++ Y+
Sbjct: 71 DE--------MKSFGIEPDVFTYRAIVDGCCKSFRMDDALRLFQEMRGSYGVKGDAVVYN 122
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GL + A + M G S+ ++N+++ L NG E + +++ K
Sbjct: 123 SLLDGLFKAKKLDEACGFFETMVADGIQCSASTHNTVIDGLFKNGRAEAACRLFYDLRRK 182
Query: 355 QRPVDFITYRTVLDEICRRGRA---GEAMKLLKELQNKNL-IDGYTYTKLL 401
+ +D I Y ++ E C+ G+ EA++L+KE++ + +D T T LL
Sbjct: 183 GQLLDGIAYSIMVREFCKEGKGDQVAEAVELMKEMEERGFAVDLVTVTSLL 233
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 215 NILFTAFLSRGKNTYINHVYMETIRC-LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
N + FL++GK ++ C LF+ G + ++ NS++ ++ ++
Sbjct: 364 NTYMSIFLAKGK---------LSVACKLFEIFTTLGRKGTSYTYNSLMTSFVKKGYLKQV 414
Query: 274 LRIFHQMGVVYNYLPNSF-SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
I H+ G PN +Y+ +I GL G+ + A + E+ +KG YN+L+
Sbjct: 415 WAILHERG--GQLCPNDIATYNLIIQGLGQMGKAEVAGSIISELSKKGVYMDIVMYNTLI 472
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ L G+V+E L ++I + D +T+ T+++ + GR EA K L+++ + +
Sbjct: 473 NQLGKAGKVDEANSLLEQIIGRGIKPDVVTFNTLININAKAGRLKEADKYLRKMIAEGIA 532
Query: 393 DGYTYTKLLDVLEDDF 408
Y +L L+ +
Sbjct: 533 PNYATETILVFLDKEI 548
>gi|297820862|ref|XP_002878314.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324152|gb|EFH54573.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 475
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 34/296 (11%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
F W+ +Q FRH ++YH++ + Y+ M +V++M+ F T +N +I
Sbjct: 137 FFVWSGEQDCFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMV-QDGFPTTARTFNLLICS 195
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY-------- 234
EA +A V ++MK S+ RP SYN + + L + I VY
Sbjct: 196 CGEAGLAKQA--VVQFMK-SKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYEQMLEDGF 252
Query: 235 -------------------METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
M+ LF +M DG+ PD ++ N ++ N AL
Sbjct: 253 SPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGLSPDFYTYNILLHILGKGNKPLAALT 312
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
+ M V L + Y LI GL G + + DEM + G P Y +++
Sbjct: 313 TLNHMKEVGIDL-SVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 371
Query: 336 ALNGEVEETVKNLWEM-IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
++GE+E+ + EM +E Q P + TY +++ +C G EA LLKE++++
Sbjct: 372 VVSGELEKAKEMFKEMTVEGQLP-NVFTYNSMIRGLCMAGEFREACWLLKEMESRG 426
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 22/246 (8%)
Query: 122 ELFNWASKQ---PRFRHDASTYHIM---TRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL 175
+L W +Q F D TY+I+ +LG + + D + + +P F
Sbjct: 238 KLIEWVYEQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGLSPDF----YT 293
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +++ + K A+ +MK + S+ Y L LSR N +
Sbjct: 294 YNILLHILGKGNKPLAALTTLNHMKE---VGIDLSVLHYTTLIDG-LSRAGN-------L 342
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +MV G PD+ MI GY++S + A +F +M V LPN F+Y+
Sbjct: 343 EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELEKAKEMFKEM-TVEGQLPNVFTYNS 401
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC G + A L EM+ +G P+ Y++LVS L G++ E K + +M++K
Sbjct: 402 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRDMVKKG 461
Query: 356 RPVDFI 361
V +
Sbjct: 462 HYVHLV 467
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I ++ A+ +F+ MKN C+P +Y+IL + + +
Sbjct: 371 FNTLIQGLCLSKNQDIAMEMFEEMKNKG---CKPDEFTYSILIDSLCYERR--------L 419
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L K+M + G + N++I G S + DA IF QM ++ +S +Y+
Sbjct: 420 KEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELL-GVSRSSVTYNT 478
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC R + A +L D+M +G P +YNSL++ G++E+ + M
Sbjct: 479 LIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 538
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D TY T++ +CR GR A KLL+ +Q K ++
Sbjct: 539 CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIV 575
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 115/229 (50%), Gaps = 17/229 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I + + +A+ + + M EC P+ +YN L +A + +
Sbjct: 301 YNSLISGMCKLGEFEKAIEILQQMILR---ECSPNTVTYNTLISALCKENE--------I 349
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L + +V+ G+ PD+ + N++I+G LS + + A+ +F +M P+ F+Y
Sbjct: 350 EAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK-NKGCKPDEFTYSI 408
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE--ETVKNLWEMIE 353
LI LC + R K A L EM+ G ++ YN+L+ L + +E E + + E++
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLG 468
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
R +TY T++D +C+ R EA +L+ ++ + L D +TY LL
Sbjct: 469 VSR--SSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 515
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 17/279 (6%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YN 177
+ +E+F K + D TY I+ L + +E ++ +M + S C A+ YN
Sbjct: 386 IAMEMFEEM-KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMES--SGCARNAVVYN 442
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T+I ++R++ A +F M+ L S +YN L + +E
Sbjct: 443 TLIDGLCKSRRIEDAEEIFDQMEL---LGVSRSSVTYNTLIDGLCKNKR--------VEE 491
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
L QM+ +G++PD F+ NS++ + + A I M P+ F+Y LI
Sbjct: 492 ASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMAS-NGCEPDIFTYGTLI 550
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GLC GR A +L ++ KG V + +YN ++ AL + +E ++ EM+EK P
Sbjct: 551 GGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDP 610
Query: 358 VDFITYRTVLDEICRRGRA-GEAMKLLKELQNKNLIDGY 395
D +T++ V +C G EA+ E+ K ++ +
Sbjct: 611 PDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEF 649
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M+ G +PD+++ NS+I G A+ I QM ++ PN+ +Y+ LI LC +
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQM-ILRECSPNTVTYNTLISALCKEN 347
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ A +L + KG +P ++N+L+ L L+ + ++ EM K D TY
Sbjct: 348 EIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYS 407
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKN----------LIDGYTYTKLLDVLEDDF 408
++D +C R EA+ LLKE+++ LIDG ++ ++ E+ F
Sbjct: 408 ILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIF 461
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I +A +L A+ + + M N +P ++ L F+ G +N
Sbjct: 161 FNVLIKALCKAHQLRPAILMLEEMANHG---LKPDEITFTTLMQGFIEEGD---LNGALK 214
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ KQM+ G S+ ++ G+ V +ALR ++ + P+ +++
Sbjct: 215 -----MKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSE-EGFSPDQVTFNS 268
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L++G C G +A ++ D M KGF P +YNSL+S + GE E+ ++ L +MI ++
Sbjct: 269 LVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE 328
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ +TY T++ +C+ A L + L +K L+ D T+ L+ L
Sbjct: 329 CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGL 378
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 43/278 (15%)
Query: 165 ATPSFCGTEALYNTIIYFFAEARKLSR----------AVYVFKYMKNSRNLECRPSIRSY 214
A+PSFC +Y + + + KLSR AV +F M SR PSI +
Sbjct: 13 ASPSFC-LRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPF---PSIVEF 68
Query: 215 NILFTAF---------LSRGKNTYINHV------YMETIRCL------------FKQMVN 247
+ L +A +S G+ I V Y I CL +M+
Sbjct: 69 SKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMK 128
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G P I +LNS++ G+ N +++A+ + QM V Y P++ ++ L+HGL +
Sbjct: 129 LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM-VEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A L + M KG P +Y ++++ L GE + + L +M + + D + Y TV+
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 368 DEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +C+ +A+ L E+ NK + D +TY+ L+ L
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 101/190 (53%), Gaps = 10/190 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ ++N L AF GK +E + LF +M+ I+P+I + NS+I G+ + +
Sbjct: 308 PNVVTFNSLIDAFAKEGK-------LIEAEK-LFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A +IF M V + LP+ +Y+ LI+G C + + EL +M R+G V ++ +Y
Sbjct: 360 RLDEAQQIFTLM-VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ + + +M+ + +TY T+LD +C+ G+ +AM + + LQ
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 389 KNL-IDGYTY 397
+ D YTY
Sbjct: 479 SKMEPDIYTY 488
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 44/265 (16%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YN++I F +L A +F M + +C P + +YN L F K
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSK---DCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 227 -------------NTYINHVYMETIRC-----LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
T + H + + C +FKQMV+DG+ P+I + N+++ G +
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 269 HVNDALRIFHQMGVVYNYL------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
+ A+ VV+ YL P+ ++Y+ + G+C G+ ++ +L + KG
Sbjct: 465 KLEKAM-------VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P +YN+++S G EE +M E D TY T++ R G + +L
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 383 LKELQNKNLI-DGYTYTKLLDVLED 406
+KE+++ D TY + D+L D
Sbjct: 578 IKEMRSCRFAGDASTYGLVTDMLHD 602
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 111/232 (47%), Gaps = 21/232 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVY 234
+ T+++ + K S AV + + M C+P + +Y + RG+ + +N
Sbjct: 173 FTTLVHGLFQHNKASEAVALVERMVVKG---CQPDLVTYGAVINGLCKRGEPDLALN--- 226
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
L +M IE D+ +++I HV+DAL +F +M G+ P+ F
Sbjct: 227 ------LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI----RPDVF 276
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y LI LC GR +A L +M + P+ ++NSL+ A A G++ E K EM
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLD 402
I++ + +TY ++++ C R EA ++ + +K+ L D TY L++
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 13/233 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + AK + ++ M + G Y T+I+ F +A A V
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDM-SRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
FK M + P+I +YN L GK +E +F+ + +EPDI+
Sbjct: 438 FKQMVSDG---VHPNIMTYNTLLDGLCKNGK--------LEKAMVVFEYLQKSKMEPDIY 486
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N M +G + V D +F + + P+ +Y+ +I G C +G + A L +
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLS-LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
MK G +P S +YN+L+ A +G+ + + + EM + D TY V D
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 109/220 (49%), Gaps = 20/220 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N++I FA+ KL A +F M R+++ P+I +YN L N + H +
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQ-RSID--PNIVTYNSLI--------NGFCMHDRL 361
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ + +F MV+ PD+ + N++I G+ + V D + +F M G+V N+ +
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV----GNTVT 417
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LIHG NA+ + +M G P+ +YN+L+ L NG++E+ + ++E +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV-VFEYL 476
Query: 353 EKQR-PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+K + D TY + + +C+ G+ + L L K +
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 25/275 (9%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFCGTEALY 176
+ F WA KQ + H YH M L + YQ M D+VN+M L +FC
Sbjct: 62 QFFEWAGKQRNYTHSIRAYHTMIESLAKIRQYQIMWDLVNKMRSLKILNVETFC------ 115
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
I+ +A ++K+ AVY F M+ + P++ ++N L +A L + KN
Sbjct: 116 -IIMRKYARSQKVKEAVYTFNIMEK---YDVPPNLAAFNSLLSA-LCKSKNVV------- 163
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ +F M D PD + + +++G+ + ++ A IF +M V P+ +Y +
Sbjct: 164 KAQEIFNGM-KDQFIPDSKTYSILLEGWGKAPNLPKAREIFREM-VDMGCDPDIVTYGIM 221
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ LC GR A + EM P+S Y+ LV + +E+ V +M +
Sbjct: 222 VDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEI 281
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D Y ++ C+ + A ++L E+ K +
Sbjct: 282 EADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGI 316
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 21/256 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG-TEALYNTIIYFFAEARKLSRAVY 194
D TY IM L A E +V +M S C T +Y+ +++ + ++ AVY
Sbjct: 214 DIVTYGIMVDILCKAGRVDEAVGIVKEM--DSSVCKPTSFIYSVLVHTYGIENRIEDAVY 271
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAF--LSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
F M+ RN E + YN L AF +++ KN Y + +M GI P
Sbjct: 272 TFLDME--RN-EIEADVAVYNALIGAFCKVNKLKNAYR----------VLNEMDCKGIRP 318
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ + N ++ I ++A R+F +M V + P++ +Y +I C + + A ++
Sbjct: 319 NSRTCNIILNSLISCGDTDEAFRVFRRMIKVCD--PDADTYTMMIKMFCENDKLEMALKV 376
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
M+ K FVPS +++ L++ L G + L EMIEK +T+ + + +
Sbjct: 377 WKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIK 436
Query: 373 RGRAGEAMKLLKELQN 388
GR + ++ L+E N
Sbjct: 437 EGRE-DVLEFLQEKMN 451
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 32/251 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YNT+I +A+KL AV + M+ + C P+ + L G+
Sbjct: 182 YNTLINGLCKAKKLKEAVGLLLEMEAAG---CFPNSVTCTTLMDGLCKDGRMDEAMELLE 238
Query: 227 ------------------NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ + N+ ++ + LF +M+ GI ++ + + ++ G
Sbjct: 239 AMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLG 298
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+A + + M + P+ +Y LI GLC GR +A +L + M KG PS+ +Y
Sbjct: 299 QWKEANTVLNAM-AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 357
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-Q 387
N L+S L G V + K L MIEK + D +TY T++ +C +G+ EA+KL +
Sbjct: 358 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFD 417
Query: 388 NKNLIDGYTYT 398
N+N ++ +T
Sbjct: 418 NENCLEPNVFT 428
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 113/234 (48%), Gaps = 19/234 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + K+ A+ +F M ++ N P++ ++N+L G+ T ++
Sbjct: 392 YNTLMKGLCDKGKVDEALKLFNSMFDNENC-LEPNVFTFNMLIGGLCKEGRLTKAVKIH- 449
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
++MV G ++ + N ++ G + + + +A+ ++ Q+ + ++PNSF+Y
Sbjct: 450 -------RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV-LDLGFVPNSFTYSI 501
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C A+ L EM+ G P+ YN+L+++L G +E+ EM
Sbjct: 502 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 561
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-----IDGYTYTKLLDVL 404
D I++ T++D + G + +KELQ K + D T++ L++ L
Sbjct: 562 CEPDIISFNTMIDGTLKAGD----FQFVKELQMKMVEMGLRPDALTFSTLINRL 611
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 13/245 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+++ A +E ++ Q+L F Y+ +I F + R L+ A +F
Sbjct: 463 TYNMLLGGCLKAGKIKEAMELWKQVLDL-GFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 521
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M R P++ YN L + G +E + LF++M N EPDI S N
Sbjct: 522 M---RTHGLNPALFDYNTLMASLCKEGS--------LEQAKSLFQEMGNANCEPDIISFN 570
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+MI G + + + +M V P++ ++ LI+ L G A+ + M
Sbjct: 571 TMIDGTLKAGDFQFVKELQMKM-VEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVA 629
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
GF P + Y+SL+ L+ G+ E + L +M K +D T+L +C + +
Sbjct: 630 SGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVD 689
Query: 379 AMKLL 383
M+LL
Sbjct: 690 VMELL 694
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 12/218 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A N ++ A +R A V++ M + ++ PS S + L F K +
Sbjct: 75 ATCNFLVDALARSRNYGLAFSVYRRMTH---VDVLPSFGSLSALIECFADAQKP----QL 127
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ + K+ G ++F +N ++KG + V +A+ + +MG + P+ SY
Sbjct: 128 GFGVVGLVLKR----GFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGR-KSVSPDIVSY 182
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LI+GLC + K A L EM+ G P+S + +L+ L +G ++E ++ L M +
Sbjct: 183 NTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKK 242
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
K D + Y T++ C G +L E+ K +
Sbjct: 243 KGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGI 280
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
CG YN ++ +A K+ A+ ++K + +L P+ +Y+IL F K
Sbjct: 458 CGNLVTYNMLLGGCLKAGKIKEAMELWKQV---LDLGFVPNSFTYSILIDGFC---KMRM 511
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+N + LF +M G+ P +F N+++ + A +F +MG N P+
Sbjct: 512 LN-----IAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA-NCEPD 565
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
S++ +I G G + +EL +M G P + ++++L++ L+ GE++E L
Sbjct: 566 IISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALE 625
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
M+ D + Y ++L + +G E + LL ++ K +
Sbjct: 626 RMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 668
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 131/309 (42%), Gaps = 31/309 (10%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
F WA P F+H ++HI+ LG+ K + + D + +M + + ++ I
Sbjct: 97 FFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLIEMRGSCHYEINSEIFWLIFRA 156
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF------------TAFLSRGKNTYI 230
+++A A+ F M +P+I ++ L F + KN ++
Sbjct: 157 YSQANLPDGAIRSFNRMD---EFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFL 213
Query: 231 NHVYMETIRC--------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
+I LF+ M+ G D+ + N++++ V++A I
Sbjct: 214 LTAKTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTI 273
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
FH M + P++F+Y IH C ++A + D+M+R +P+ +YN ++ L
Sbjct: 274 FHDM-LSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLC 332
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGY 395
N VEE L EMI + D +Y + C A++L+ ++ N L D +
Sbjct: 333 KNEHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRH 392
Query: 396 TYTKLLDVL 404
TY +L +L
Sbjct: 393 TYNMVLKLL 401
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 130/258 (50%), Gaps = 21/258 (8%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT-EALYNTIIYFFAEARKLSRA 192
+ D +++ + + L A+ + + +++ +ML C T E +N +I + ++ A
Sbjct: 420 KPDTISFNAVLKCLCRAERWYDAAELMAKMLKED--CHTNEMTFNILIDSLCQNGQVKDA 477
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F+ M R C P I +Y+ L F +G ++ V + LF+ M
Sbjct: 478 IEMFELMPKYR---CTPDIVTYSSLINGFSEQG----LDKVAFD----LFRSM---PCRA 523
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
DIFS N+ +KG ++ +DA + M V + LPN +++ LI+ LC +G A E+
Sbjct: 524 DIFSYNATLKGLCMAARWDDAGELIADM-VTKDCLPNEVTFNILINSLCQKGLVNRAIEV 582
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++M + G P +YN+L++ + G +++ +K L M + D I+Y ++L +CR
Sbjct: 583 YEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCEP---DTISYNSILKGLCR 639
Query: 373 RGRAGEAMKLLKELQNKN 390
R +A KL+ E+ KN
Sbjct: 640 AERWKDAEKLVTEMLRKN 657
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 17/229 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ A++ A + + M RN C P+ ++ AF G +
Sbjct: 222 YNTVLKGLCFAKQWEEAEELMREM--IRN-NCHPNEVTFATQIRAFCQNG--------LL 270
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L +QM G PD+ ++++ G+ V+DAL++ M PN+ Y+
Sbjct: 271 DRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLC----RPNTVCYNA 326
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+ GLC GR EL EM RK P+ ++++L+++L N E ++ L +M +
Sbjct: 327 ALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYG 386
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
D ++Y T++ + A +A+KLL + K D ++ +L L
Sbjct: 387 YMPDVVSYNTIISCFSEQACADDALKLLNSMLCKP--DTISFNAVLKCL 433
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+C P+ ++NIL + +G VY +QM GI PDIF+ N++I GY
Sbjct: 555 DCLPNEVTFNILINSLCQKGLVNRAIEVY--------EQMPKYGITPDIFTYNALINGYS 606
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
++DAL+ M P++ SY+ ++ GLC R K+A +L EM RK P+
Sbjct: 607 EQGCLDDALKFLSTMPCE----PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNE 662
Query: 326 KSY 328
++
Sbjct: 663 VTF 665
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + ++I GY S + DALR+ M V P++++Y+ ++ GLC + + A EL
Sbjct: 186 NVVTYTALIDGYCRSGRLTDALRLIASMPVA----PDTYTYNTVLKGLCFAKQWEEAEEL 241
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
EM R P+ ++ + + A NG ++ V+ L +M + D + Y T+++
Sbjct: 242 MREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSE 301
Query: 373 RGRAGEAMKLLKEL 386
GR +A+KLL +
Sbjct: 302 HGRVDDALKLLSTM 315
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 120/267 (44%), Gaps = 22/267 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T +I+ +KL A + + + V+ + S +NT++ + L A V +
Sbjct: 121 TCNILIKKLCARRRLADAERVLEAL--KTSGAADAVSHNTLVAGYCRDGSLWDAERVLEA 178
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
+ S ++ +Y L + G+ T + +R L M + PD ++ N
Sbjct: 179 ARASG----AANVVTYTALIDGYCRSGRLT-------DALR-LIASM---PVAPDTYTYN 223
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+++KG + +A + +M + N PN ++ I C G A EL ++M +
Sbjct: 224 TVLKGLCFAKQWEEAEELMREM-IRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPK 282
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G +P Y++LV+ + +G V++ +K L M+ RP + + Y L +C GR E
Sbjct: 283 YGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTML--CRP-NTVCYNAALKGLCIAGRWDE 339
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLDVL 404
+L+ E+ K+ + T++ L++ L
Sbjct: 340 VGELIAEMVRKDCPPNDATFSTLINSL 366
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 111/252 (44%), Gaps = 39/252 (15%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+Y+T++ F+E ++ A+ + M CRP+ YN G+ + +
Sbjct: 291 IYSTLVNGFSEHGRVDDALKLLSTML------CRPNTVCYNAALKGLCIAGRWDEVGELI 344
Query: 235 METIR-----------------C----------LFKQMVNDGIEPDIFSLNSMIKGYILS 267
E +R C + +QM G PD+ S N++I +
Sbjct: 345 AEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQ 404
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+DAL++ + M P++ S++ ++ LC R +A EL +M ++ + +
Sbjct: 405 ACADDALKLLNSMLCK----PDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMT 460
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPV-DFITYRTVLDEICRRGRAGEAMKLLKEL 386
+N L+ +L NG+V++ ++ ++E++ K R D +TY ++++ +G A L + +
Sbjct: 461 FNILIDSLCQNGQVKDAIE-MFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSM 519
Query: 387 QNKNLIDGYTYT 398
+ I Y T
Sbjct: 520 PCRADIFSYNAT 531
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 41/257 (15%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTII F+E A+ + M C+P S+N + L R + Y M
Sbjct: 394 YNTIISCFSEQACADDALKLLNSML------CKPDTISFNAVLKC-LCRAERWYDAAELM 446
Query: 236 ETI---RCLFKQM--------------VNDGIE-----------PDIFSLNSMIKGYILS 267
+ C +M V D IE PDI + +S+I G+
Sbjct: 447 AKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQ 506
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
A +F M + FSY+ + GLC R +A EL +M K +P+ +
Sbjct: 507 GLDKVAFDLFRSMPCRADI----FSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVT 562
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+N L+++L G V ++ +M + D TY +++ +G +A+K L +
Sbjct: 563 FNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMP 622
Query: 388 NKNLIDGYTYTKLLDVL 404
+ D +Y +L L
Sbjct: 623 CEP--DTISYNSILKGL 637
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + + N +IK + DA R+ + + ++ S++ L+ G C G +A
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKT--SGAADAVSHNTLVAGYCRDGSLWDAER 174
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDE 369
+ + + G + +Y +L+ +G + + ++ + M PV D TY TVL
Sbjct: 175 VLEAARASG-AANVVTYTALIDGYCRSGRLTDALRLIASM-----PVAPDTYTYNTVLKG 228
Query: 370 ICRRGRAGEAMKLLKELQNKN 390
+C + EA +L++E+ N
Sbjct: 229 LCFAKQWEEAEELMREMIRNN 249
>gi|255555093|ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542429|gb|EEF43971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 135/301 (44%), Gaps = 35/301 (11%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
++ + +S+ P FR Y + R+L AK + ++D + E +I
Sbjct: 39 VQRYKRSSESPEFRARHRFYSTIVRRLSFAKQFSMVEDFLEHQKNFADIT-NEQFTIRLI 97
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------------- 226
+ +A L A +F M +L+C ++RS+N L +A + GK
Sbjct: 98 SLYGKAGMLDHAHRLFDEMP---DLKCTRTVRSFNALLSACIDSGKFDKVQGFLRDFPVK 154
Query: 227 --------------NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
Y +++ + +M GIEPD+ + N+++ G+ + D
Sbjct: 155 LGITPDVVSFNIVIKGYCEIGNLDSGVLVLCEMEKRGIEPDLITFNTLLNGFYGNGRFVD 214
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
+I+ M N +PN SY+ + GL + R A EL EM+ KG P SYN+++
Sbjct: 215 GEKIWTLME-SKNVVPNVRSYNSRLRGLELENRVMEAVELLGEMENKGIRPDVMSYNAVI 273
Query: 333 SALALNGEVEETVKNLW-EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
L + VEE VKN + ++ E R D +TY T++ + ++G A++L E+ NK L
Sbjct: 274 KGLCNDENVEE-VKNWYRKLKENGRMPDRVTYMTLIPYLRQKGDLDGAVELCIEIMNKGL 332
Query: 392 I 392
+
Sbjct: 333 L 333
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + E L V V M+ R +E P + ++N L F G+ V
Sbjct: 164 FNIVIKGYCEIGNLDSGVLVLCEME-KRGIE--PDLITFNTLLNGFYGNGR-----FVDG 215
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
E I L M + + P++ S NS ++G L N V +A+ + +M G+ P+ S
Sbjct: 216 EKIWTL---MESKNVVPNVRSYNSRLRGLELENRVMEAVELLGEMENKGI----RPDVMS 268
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ +I GLC + + ++K G +P +Y +L+ L G+++ V+ E++
Sbjct: 269 YNAVIKGLCNDENVEEVKNWYRKLKENGRMPDRVTYMTLIPYLRQKGDLDGAVELCIEIM 328
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
K V+ ++ V+DE+ + R EA L++
Sbjct: 329 NKGLLVNATLFQHVVDELVKLSRVEEAKDLVE 360
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 154 QEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS 213
+ M + N + P+ T YN II + ++ A+ V + MK + C+P S
Sbjct: 453 KAMSMLTNMLKGRPT--PTLVTYNIIIKGYCDSGDTDVAIRVLELMKAN---GCQPDEWS 507
Query: 214 YNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
Y L + F K ME +F +M++ G+ P+ + ++I GY ++ A
Sbjct: 508 YTELISGFCKISK--------MELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCA 559
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R+ +M PN +Y+ LIHGL Q A ELC M + P +Y+++++
Sbjct: 560 ARMLERMKR-SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVIN 618
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI- 392
L NG + ++ +M++ + TY +++ + + GR EA ++ EL+ + LI
Sbjct: 619 GLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIP 678
Query: 393 DGYTYTKLLDV 403
D TY K+++V
Sbjct: 679 DEVTYVKMIEV 689
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P++ YN + A G + + ++ G++PD F+ SMI GY +
Sbjct: 225 QPNLLIYNSVINALCKDGN--------VRDAESIINKVFKSGMKPDTFTYTSMILGYCRN 276
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++ A IF++M PN+ +Y LI+GLC GR A + EM R G +P+ +
Sbjct: 277 RDLDSAFEIFNRMDE-EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHT 335
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ + + AL G +E+ K +M +K + TY ++ I + + A+ L +
Sbjct: 336 FTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL---ISGQRVSRMAIGLFHRMS 392
Query: 388 NKNLI-DGYTYTKLLDVLEDDF 408
++ + TY L++VL ++
Sbjct: 393 RDGVVPNTVTYNALMNVLMENM 414
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 122/282 (43%), Gaps = 18/282 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
E+FN ++ +A+TY + L + E D +++M T + I
Sbjct: 283 FEIFNRMDEE-GCEPNAATYSTLINGLCNSGRVNEALDFISEM-TRHGVLPTVHTFTAPI 340
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ ++ A +F MK C+P++ +Y L + R I
Sbjct: 341 VALCDMGRIEDAWKIFIDMKKK---GCKPNVYTYTSLISG--QRVSRMAIG--------- 386
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF +M DG+ P+ + N+++ + + ++ AL +F+ MG + LPN+ SY+ LI G
Sbjct: 387 LFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMG-KHGCLPNTSSYNELIRGY 445
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G T+ A + M + P+ +YN ++ +G+ + ++ L M D
Sbjct: 446 CTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDE 505
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+Y ++ C+ + A + E+ ++ L + TYT L+
Sbjct: 506 WSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALI 547
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 82/161 (50%), Gaps = 2/161 (1%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+ Q++ +G++P++ NS+I +V DA I +++ P++F+Y +I G C
Sbjct: 216 YHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV-FKSGMKPDTFTYTSMILGYC 274
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+A E+ + M +G P++ +Y++L++ L +G V E + + EM
Sbjct: 275 RNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVH 334
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
T+ + +C GR +A K+ +++ K + YTYT L+
Sbjct: 335 TFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLI 375
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +++ ++PD+ ++I + V DA ++ +M +V PN F+Y+ LI+G
Sbjct: 220 LLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEM-IVKGISPNVFTYNTLIYGF 278
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G K A L +EMK K P ++N L+ AL G+++E + EM K +
Sbjct: 279 CIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNI 338
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+TY +++D +C+ A+ L K+++ + + D Y+YT LLD L
Sbjct: 339 VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDAL 383
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 14/246 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+Y TII+ + +++ A ++ M P++ +YN L F G
Sbjct: 234 VMYTTIIHCLCKNKRVGDACDLYSEMIVK---GISPNVFTYNTLIYGFCIMGN------- 283
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
++ L +M I PD+++ N +I +++A+ +F +M N PN +Y
Sbjct: 284 -LKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKH-KNMFPNIVTY 341
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI GLC + A LC +MK +G P SY L+ AL G +E + ++
Sbjct: 342 TSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLV 401
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY-TKLLDVLEDDFGNS 411
K ++ TY +++ +C+ G G+ M L +++ K + D T+ T + + E D +
Sbjct: 402 KGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDK 461
Query: 412 IRHHLR 417
LR
Sbjct: 462 AEKFLR 467
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ + NIL F T+ V F ++ G PD +LN++IKG
Sbjct: 126 PNLCTLNILINCFCHLAHITFAFSV--------FANILKRGYHPDAITLNTLIKGLCFCG 177
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ AL FH V + + SY LI+GLC G TK L +++ P Y
Sbjct: 178 EIKRALY-FHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMY 236
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+++ L N V + EMI K + TY T++ C G EA LL E++
Sbjct: 237 TTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKL 296
Query: 389 KNL-IDGYTYTKLLDVL 404
KN+ D YT+ L+D L
Sbjct: 297 KNINPDVYTFNILIDAL 313
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 109/221 (49%), Gaps = 18/221 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+IY F L A + MK +N+ P + ++NIL A GK +
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMK-LKNI--NPDVYTFNILIDALGKEGK--------I 319
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ LF++M + + P+I + S+I G ++H+ A+ + +M G+ P+ +S
Sbjct: 320 DEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ----PDVYS 375
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y L+ LC GR +NA++ + KG+ + ++YN +++ L G + + +M
Sbjct: 376 YTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKME 435
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
K D IT++T++ + + +A K L+E+ + L++
Sbjct: 436 GKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLLE 476
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
T+ LFKQ ++G+ P++ +LN +I + H+ A +F + + Y P++ + + L
Sbjct: 111 TVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANI-LKRGYHPDAITLNTL 169
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I GLC G K A D++ +GF SY +L++ L GE + + L ++
Sbjct: 170 IKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSV 229
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D + Y T++ +C+ R G+A L E+ K + + +TY L+
Sbjct: 230 KPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLI 275
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 139/310 (44%), Gaps = 45/310 (14%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV--VNQMLATPSFCG 171
+ D + LE F + F+H TY +M KL + + EMD V + Q +
Sbjct: 53 EHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASER---EMDCVQYLLQQMKLEGISC 109
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
+E L+ ++I + A +A+ F M++ R +P+++ YN + A L + IN
Sbjct: 110 SEDLFISVIGSYRRAGSSEQALKTFYRMQDFR---VKPTVKIYNHILDALLDENRFQMIN 166
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG---------- 281
+Y M DG+EP++F+ N ++K +N V+ A ++ +M
Sbjct: 167 PIY--------SNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVS 218
Query: 282 -------------------VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
+ ++ P+ Y+ LI+G+C + + A +L DEM KG
Sbjct: 219 YTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P+ SY ++++AL+ G VE ++ L +M + + T+ +++ +G + EA+
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDF 338
Query: 383 LKELQNKNLI 392
+ + ++
Sbjct: 339 WDRMIREGVV 348
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 119/264 (45%), Gaps = 14/264 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
Y+ + L + + + V NQM C Y+ +I +A+A L A V+ +
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQM-EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M C P++ +Y + +N+ N Y CL + M + P+ + N
Sbjct: 412 MITHG---CHPNVVAYTCMVDVLC---RNSMFNQAY-----CLIENMQVENCPPNTVTFN 460
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+ IKG S V+ A+++F QMG PN+ +Y+ L+ L R A L +M+
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGN-SGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEH 519
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G + +YN+++ G + E ++ L +M+ + D IT V+D C++G+
Sbjct: 520 RGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNI 579
Query: 379 AMKLLKELQ-NKNLIDGYTYTKLL 401
A++L+ L K D YT L+
Sbjct: 580 AIQLMDRLSAGKWHPDIIAYTSLI 603
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 13/240 (5%)
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
+ T T Y II++ L++ + M+ +R L P+++ YN + A
Sbjct: 142 METKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMR-ARGLS--PNVQIYNTVINALCK 198
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
+ + + QMV PD+ + N+MI G+ V +AL++ + +
Sbjct: 199 CRSASQASD--------MLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLRE-AIR 249
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
PN SY LIHG C +G A +L EM +G P + +L+ L ++G+V +
Sbjct: 250 RGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVND 309
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLD 402
+ +M E+Q D Y ++ +C++ A LL+E L+ K D + YT L+D
Sbjct: 310 ALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLID 369
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 21/202 (10%)
Query: 209 PSIRSYNILFTAF-----LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
P YN+L + LS KN L ++M+ ++PD F ++I G
Sbjct: 324 PDANIYNVLISGLCKKRMLSAAKN-------------LLEEMLEQKVQPDKFIYTTLIDG 370
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
++ S+ ++DA +IF M P+ +Y+ +I G C G K A M++ G +P
Sbjct: 371 FVRSDKLSDARKIFEFM--EEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIP 428
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+Y +LV A G++ +++ L +M++++ + TY +++ C G A L
Sbjct: 429 DEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLF 488
Query: 384 KELQNKNLIDGYT-YTKLLDVL 404
++Q++ L YT L+ L
Sbjct: 489 AKMQSEGLFPNVVHYTVLIGSL 510
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 114/263 (43%), Gaps = 13/263 (4%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + LG +++ ++ +M A +YNT+I + R S+A +
Sbjct: 153 TYGAIIHWLGRKGDLTKVESLLGEMRAR-GLSPNVQIYNTVINALCKCRSASQASDMLNQ 211
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M SR P + ++N + F G E ++ L ++ + G+EP+ S
Sbjct: 212 MVKSRF---NPDVVTFNTMIAGFCREGD-------VREALK-LLREAIRRGLEPNQLSYT 260
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+I G+ + A + +M + + P+ + LIHGL G+ +A + ++M
Sbjct: 261 PLIHGFCVRGEAMVASDLLVEM-MGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAE 319
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+ +P + YN L+S L + L EM+E++ D Y T++D R + +
Sbjct: 320 RQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSD 379
Query: 379 AMKLLKELQNKNLIDGYTYTKLL 401
A K+ + ++ K D Y ++
Sbjct: 380 ARKIFEFMEEKACPDIVAYNVMI 402
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 16/241 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA+ Y+++ L +M +++ +ML + +Y T+I F + KLS A +
Sbjct: 325 DANIYNVLISGLCKKRMLSAAKNLLEEMLEQ-KVQPDKFIYTTLIDGFVRSDKLSDARKI 383
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F++M+ C P I +YN++ + G + E + C+ M G PD F
Sbjct: 384 FEFMEEK---AC-PDIVAYNVMIKGYCKFG-------MMKEAVTCM-SSMRKAGCIPDEF 431
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +++ GY ++ +LR+ M + PN F+Y LI G C G T +A +L +
Sbjct: 432 TYTTLVDGYAKKGDISASLRLLCDM-MKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAK 490
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI--CRR 373
M+ +G P+ Y L+ +L +V + M+ P + T +++ + CR
Sbjct: 491 MQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRH 550
Query: 374 G 374
G
Sbjct: 551 G 551
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E R L + +G P N +I GY + L + +M +P +Y
Sbjct: 97 VEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEM-ETKGIIPTVVTYG 155
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+IH L +G L EM+ +G P+ + YN++++AL + L +M++
Sbjct: 156 AIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKS 215
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ D +T+ T++ CR G EA+KLL+E + L + +YT L+
Sbjct: 216 RFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLI 263
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ +S ++ GLC +GR + R L + +G VP + YN L+ G++ + L
Sbjct: 80 DDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLL 139
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
EM K +TY ++ + R+G + LL E++ + L
Sbjct: 140 GEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 28/258 (10%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y++M + M +E ++ M E Y T++ +A+ +S ++ +
Sbjct: 394 DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCI-PDEFTYTTLVDGYAKKGDISASLRL 452
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M R C+P+I +Y L + + G +TY + LF +M ++G+ P++
Sbjct: 453 LCDMMKRR---CKPNIFTYASLICGYCNIG-DTY-------SAEDLFAKMQSEGLFPNVV 501
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL--CAQGR-------T 306
+I + V A F M ++ + PN + YL++GL C G T
Sbjct: 502 HYTVLIGSLFKKDKVIQAAAYFEHM-LLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDT 560
Query: 307 KNARE---LCDEMK---RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
K A E L D + G P +YN+++ +L + + + + +M K D
Sbjct: 561 KQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDP 620
Query: 361 ITYRTVLDEICRRGRAGE 378
IT+ ++L G +G+
Sbjct: 621 ITFLSLLYGFSSAGESGK 638
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 13/256 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +T++ + L +E D+ + L +N +I + AV +
Sbjct: 370 DTTTFNTLIVALCTENQLEEALDLARE-LTVKGLSPNVYTFNILINALCKVGDPHLAVRL 428
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ MK+S C P +YNIL S GK + L K+M G
Sbjct: 429 FEEMKSSG---CTPDEVTYNILIDNLCSSGK--------LAKALDLLKEMEVSGCPQSTV 477
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N++I G + +A +F QM V N+ +++ LI GLC R +A EL D+
Sbjct: 478 TYNTIIDGLCKRRRIEEAEEVFDQMDVT-GIGRNAITFNTLIDGLCNAERIDDAAELVDQ 536
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +G P++ +YNS+++ G + + L M VD +TY T+++ +C+ R
Sbjct: 537 MISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARR 596
Query: 376 AGEAMKLLKELQNKNL 391
A+KLL+ ++ K +
Sbjct: 597 TQAALKLLRGMRMKGM 612
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 17/297 (5%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
L N + DP + + LF K D TY+I+ L ++ + D++ +M
Sbjct: 412 LINALCKVGDPHLAVRLFE-EMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEV- 469
Query: 167 PSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
S C + YNTII + R++ A VF M + I I F +
Sbjct: 470 -SGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVT-------GIGRNAITFNTLI--- 518
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+ N ++ L QM+++G++P+ + NS++ Y +++ A I M
Sbjct: 519 -DGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM-TANG 576
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+ + +Y LI+GLC RT+ A +L M+ KG P+ K+YN ++ +L + +
Sbjct: 577 FEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDAL 636
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRA-GEAMKLLKELQNKNLIDGYTYTKLL 401
EM E P D TY+ V +CR G EA L E+ + I ++ ++L
Sbjct: 637 SLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRML 693
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 122/303 (40%), Gaps = 16/303 (5%)
Query: 105 EELCNVMTLQEDPLVCLELFNWA-SKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM 163
E L + Q DP L + N A ++ Y + RKLG A + M +V +M
Sbjct: 57 ERLVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEM 116
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL-ECRPSIRSYNILFTAFL 222
G E + F +L F + N ++ + + YN L T
Sbjct: 117 RRE----GHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLA 172
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV 282
K + Y E M + GIEPD+ + N++I + A+ + +M
Sbjct: 173 EGSKIKLLESAYTE--------MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSS 224
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+ P+ ++ L+ G +G + A L M G P+S + N L++ G V
Sbjct: 225 C-DVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVG 283
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK-ELQNKNLIDGYTYTKLL 401
+ + + + I D +T+ T ++ +C+ G A+K+L LQ D YTY+ ++
Sbjct: 284 DALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVI 343
Query: 402 DVL 404
+ L
Sbjct: 344 NCL 346
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 119/260 (45%), Gaps = 32/260 (12%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------ 226
E + T++ F E + A+ + M + C P+ + N+L + G+
Sbjct: 231 ETTFTTLMEGFVEEGSIEAALRLKARMSE---MGCSPTSVTVNVLINGYCKLGRVGDALG 287
Query: 227 -----------------NTYINHV----YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+T++N + +++ + M+ +G EPD+++ +++I
Sbjct: 288 YIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLC 347
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ + +A I +QM V LP++ +++ LI LC + + + A +L E+ KG P+
Sbjct: 348 NNGELEEAKGIVNQM-VDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNV 406
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
++N L++AL G+ V+ EM D +TY ++D +C G+ +A+ LLKE
Sbjct: 407 YTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKE 466
Query: 386 LQNKNLIDG-YTYTKLLDVL 404
++ TY ++D L
Sbjct: 467 MEVSGCPQSTVTYNTIIDGL 486
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 135 HDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVY 194
+A T++ + L A+ + ++V+QM+ + YN+I+ + + +S+A
Sbjct: 509 RNAITFNTLIDGLCNAERIDDAAELVDQMI-SEGLQPNNVTYNSILTHYCKQGNISKAAD 567
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ + M + E + +Y L L + + T + L + M G++P
Sbjct: 568 ILQTM-TANGFEV--DVVTYATLING-LCKARRT-------QAALKLLRGMRMKGMKPTP 616
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC-AQGRTKNARELC 313
+ N +I+ N+ DAL +F +M V P++F+Y + GLC G K A +
Sbjct: 617 KAYNPVIQSLFRGNNGRDALSLFREMTEVGGP-PDAFTYKIVFRGLCRGGGPIKEAFDFL 675
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
EM GF+P S+ L L G + ++ + ++EK
Sbjct: 676 VEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEK 716
>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 861
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 16/227 (7%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
C ++N +I F + ++ R + M ++C PSI +Y + L R KN
Sbjct: 231 GLCVDNTVFNALINGFCKQKQYDRVSEILHIMIA---MKCNPSIYTYQEIINGLLKRRKN 287
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
E R +F + + G PD ++IKG+ + +A +++ +M + +
Sbjct: 288 D-------EAFR-VFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEM-IQKGLV 338
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN ++Y+ +I+G C AR+L D+M +G+ + SY++++S L L+G+ +E +
Sbjct: 339 PNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSL 398
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
EM K D I+Y +++ +C+ G +A LL NK LI G
Sbjct: 399 FHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLL----NKLLIQG 441
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDY 295
R L+ M G ++ S ++MI G L ++AL +FH+M G+ + + SY+
Sbjct: 361 RKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLI----SYNS 416
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI GLC +G A L +++ +G PS S+ L+ L G+ E ++ L +M ++
Sbjct: 417 LIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRH 476
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMK-LLKELQNKNLIDGYTYTKLLDVLE 405
T+ ++ + ++G + M+ LLK L K + T+ L+D L+
Sbjct: 477 LEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLK 527
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 60/326 (18%), Positives = 119/326 (36%), Gaps = 62/326 (19%)
Query: 82 SKPALDDTQFRCAVSELPP-RFNNEEL-CNVMTLQEDPLVCLELFNWASKQPRFRHDAST 139
SKP ++T +S+ P F+N + + + Q + + L +W + F+ D S+
Sbjct: 44 SKPRWENT----LISQYPSFNFSNPKFFLSYLKHQNNTFLSLRFLHWLTSHCGFKPDQSS 99
Query: 140 YHIMTRKL---GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVF 196
+ + L GA K +L P F + E + VF
Sbjct: 100 CNALFDALVDAGAVK-------AAKSLLEYPDFVPKNDSLEGYVRLLGENGMVEEVFDVF 152
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
+K L PS S+N+ A L G+ + +Y I G+ D+ +
Sbjct: 153 VSLKKVGFL---PSASSFNVCLLACLKVGRTDLVWKLYELMIES------GVGVNIDVET 203
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
+ +IK + CA+ + N EL ++
Sbjct: 204 VGCLIKAF------------------------------------CAENKVFNGYELLRQV 227
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
KG + +N+L++ + + + L MI + TY+ +++ + +R +
Sbjct: 228 LEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKN 287
Query: 377 GEAMKLLKELQNKNLI-DGYTYTKLL 401
EA ++ +L+++ D YT ++
Sbjct: 288 DEAFRVFNDLKDRGYFPDRVMYTTVI 313
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 13/189 (6%)
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
F ++L NT++ ++R L + G +PD S N++ + + V A +
Sbjct: 66 FFLSYLKHQNNTFL------SLRFLHWLTSHCGFKPDQSSCNALFDALVDAGAVKAAKSL 119
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
+++P + S + + L G + ++ +K+ GF+PS+ S+N + A
Sbjct: 120 LEYP----DFVPKNDSLEGYVRLLGENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLACL 175
Query: 337 LNGEVEETVKNLWEMIEKQRPV--DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-ID 393
G + K MIE V D T ++ C + +LL+++ K L +D
Sbjct: 176 KVGRTDLVWKLYELMIESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVD 235
Query: 394 GYTYTKLLD 402
+ L++
Sbjct: 236 NTVFNALIN 244
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 10/260 (3%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FR DA T+ + + L A K + D+V + + YN ++ + + A
Sbjct: 123 FRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEA 182
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M + R P + SYN + F G + Y E M++ GI P
Sbjct: 183 LELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHE--------MLDRGILP 234
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + +S+I + ++ A+ + + M V +P+ +Y+ ++HG C+ G+ K A
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTM-VKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+M+ G P+ +Y+SL++ L NG E K M ++ D TYRT+L
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353
Query: 373 RGRAGEAMKLLKELQNKNLI 392
+G E M L +L +N I
Sbjct: 354 KGALVE-MHALLDLMVRNGI 372
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 20/268 (7%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
++F+ +K+ D +TY + + EM +++ M+ ++N +I
Sbjct: 327 KIFDSMTKR-GLEPDIATYRTLLQGYATKGALVEMHALLDLMVRN-GIQPDHHVFNILIC 384
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+A+ K+ +A+ VF M R P++ Y + G ++
Sbjct: 385 AYAKQEKVDQAMLVFSKM---RQHGLNPNVVCYGTVIDVLCKSGS--------VDDAMLY 433
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIH 298
F+QM+++G+ P+I S+I G + + A + +M G+ N + ++ +I
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN----TIFFNSIID 489
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
C +GR + +L D M R G P +YN+L+ L G+++E K L M+
Sbjct: 490 SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 549
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKEL 386
D +TY T+++ CR R +A+ L KE+
Sbjct: 550 DIVTYGTLINGYCRVSRMDDALALFKEM 577
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND---GIEPDIFSLNSMI 261
L C P + SYN L ++ E + L M +D G PD+ S N+++
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRS-------QEALE-LLHMMADDRGGGSPPDVVSYNTVL 208
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
G+ + A +H+M + LP+ +Y +I LC A E+ + M + G
Sbjct: 209 NGFFKEGDSDKAYSTYHEM-LDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P +YNS++ +G+ +E + L +M + +TY ++++ +C+ GR+ EA K
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327
Query: 382 LLKELQNKNL-IDGYTYTKLL 401
+ + + L D TY LL
Sbjct: 328 IFDSMTKRGLEPDIATYRTLL 348
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 14/225 (6%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
A+ + S A V +Y + +R + P++ +Y IL G+ ++
Sbjct: 62 LADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGR--------LDLGFA 113
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+V G D + ++KG +DA+ I + +P+ FSY+ L+ GL
Sbjct: 114 ALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGL 173
Query: 301 CAQGRTKNARELCDEM---KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
C + R++ A EL M + G P SYN++++ G+ ++ EM+++
Sbjct: 174 CDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGIL 233
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
D +TY +++ +C+ +AM++L + +N + D TY +L
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 113/261 (43%), Gaps = 14/261 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
Y + L + + ++++ +ML C +N+II + ++ + +F
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + +P I +YN L GK M+ L MV+ G++PDI +
Sbjct: 507 MVR---IGVKPDIITYNTLIDGCCLAGK--------MDEATKLLASMVSVGVKPDIVTYG 555
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I GY + ++DAL +F +M V PN +Y+ ++ GL RT A+EL + +
Sbjct: 556 TLINGYCRVSRMDDALALFKEM-VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 614
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G +YN ++ L N +E ++ + ++ T+ ++ + + GR E
Sbjct: 615 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDE 674
Query: 379 AMKLLKELQNKNLI-DGYTYT 398
A L L+ D TY+
Sbjct: 675 AKDLFAAHSANGLVPDVRTYS 695
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 118/258 (45%), Gaps = 17/258 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF--CGTEALYNTIIYFFAEARKLSRAV 193
D TY + L A+ + +V+N M+ C T YN+I++ + + + A+
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT---YNSILHGYCSSGQPKEAI 291
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
K M+ S +E P++ +Y+ L G++T R +F M G+EPD
Sbjct: 292 GTLKKMR-SDGVE--PNVVTYSSLMNYLCKNGRST--------EARKIFDSMTKRGLEPD 340
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
I + ++++GY + + + M V P+ ++ LI Q + A +
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLDLM-VRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+M++ G P+ Y +++ L +G V++ + +MI++ + I Y +++ +C
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459
Query: 374 GRAGEAMKLLKELQNKNL 391
+ +A +L+ E+ ++ +
Sbjct: 460 DKWDKAEELILEMLDRGI 477
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 101/234 (43%), Gaps = 18/234 (7%)
Query: 158 DVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
D ++LA+ G + Y T+I + ++ A+ +FK M +S P+I +Y
Sbjct: 533 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS---GVSPNIITY 589
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
NI+ + +Y+ + G + ++ + N ++ G +N ++AL
Sbjct: 590 NIILQGLFHTRRTAAAKELYV--------SITKSGTQLELSTYNIILHGLCKNNLTDEAL 641
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R+F + + L + +++ +I L GR A++L G VP ++Y+ +
Sbjct: 642 RMFQNLCLTDLQL-ETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG---RAGEAMKLLKE 385
L G +EE M E D +++ ++ +RG RAG + ++ E
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 133/274 (48%), Gaps = 27/274 (9%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL--YNTIIYFFAEARKLSR 191
R + + + + + G A + ++ ++ +QM PSF L +N ++ + + S+
Sbjct: 113 RCNETLFVALIQHYGKAHLVEKGIELFHQM---PSFNCFRTLQSFNVLLNTLVDCDQFSK 169
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A +F+ + ++ RP+ SYNI+ ++ +G E LF +M+ G++
Sbjct: 170 ASEIFQ---QAYEMDFRPNSVSYNIMIKGWIKKGG--------WEQACNLFDEMLEKGVQ 218
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + + NS + ++ AL +F M + PN+ +Y L+ G C G+ K A++
Sbjct: 219 PSVVTYNSFLGVLCRKGEMDTALCLFKNM-TEKGHHPNAVTYALLMEGWCFIGKYKEAKK 277
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L +M+ G +Y L++ L G ++E L EM +++ D +TY +++ +C
Sbjct: 278 LMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLC 337
Query: 372 RRGRAGEAMKLLKELQ----------NKNLIDGY 395
+ G+ G+A K+L ++Q + +IDGY
Sbjct: 338 KEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGY 371
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++IY A +R+ + +++N RN+ C + LF A + ++ +
Sbjct: 84 YSSLIYKLARSRRFEAVETILGHLRN-RNIRCNET------LFVALIQHYGKAHLVEKGI 136
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF QM + + S N ++ + + + A IF Q ++ PNS SY+
Sbjct: 137 E----LFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQ-AYEMDFRPNSVSYNI 191
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G +G + A L DEM KG PS +YNS + L GE++ + M EK
Sbjct: 192 MIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKG 251
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ +TY +++ C G+ EA KL+ +++
Sbjct: 252 HHPNAVTYALLMEGWCFIGKYKEAKKLMFDME 283
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 117/282 (41%), Gaps = 42/282 (14%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNT 178
E+F A + FR ++ +Y+IM + +++ ++ ++ML PS YN+
Sbjct: 172 EIFQQAYEMD-FRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSV----VTYNS 226
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------------ 226
+ ++ A+ +FK M + P+ +Y +L + GK
Sbjct: 227 FLGVLCRKGEMDTALCLFKNMTEKGH---HPNAVTYALLMEGWCFIGKYKEAKKLMFDME 283
Query: 227 -----------NTYINHVY----METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
+ H+ ++ + L +M ++PD+ + N ++ V
Sbjct: 284 FHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVG 343
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
DA ++ +M V PN+ +Y +I G C G A ++ + M G P K++ SL
Sbjct: 344 DAYKVLVKMQVG-GCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASL 402
Query: 332 VSALALNGEVEE--TVKNLWEMIEKQRPVDFITYRTVLDEIC 371
V L L GE + L EM ++Q D T+R ++ ++C
Sbjct: 403 VVGL-LKGENNDDYVCFVLEEMEKRQLRFDAETWRILIMDVC 443
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 18/273 (6%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ L D + L F W +QP F+HD +Y M LG A+ + M ++++M +
Sbjct: 339 VLKLLHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSV--H 396
Query: 170 C-GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
C T YN II+ + A L AV VF+ M+ + P +Y L G
Sbjct: 397 CKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKA---GYEPDRVTYCTLIDIHAKGG--- 450
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
Y+E L+ +M G+ PD F+ ++M+ H+ A ++F +M V P
Sbjct: 451 -----YLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEM-VENGCTP 504
Query: 289 NSFSYDYLIHGLCAQGRT-KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
N +Y+ +I L A+ R +N +L +M+ GF P +Y+ ++ L G ++E
Sbjct: 505 NLVTYNIMI-ALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAV 563
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
EM P D Y ++D + G +A+
Sbjct: 564 FIEMRHDWAP-DEPVYGLLVDLWGKAGNVDKAL 595
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT-KNARE 311
D F N ++K +L +H AL F + + + SY +I G+ Q R R+
Sbjct: 332 DAFQANQVLK--LLHDHT-IALGFFQWLKRQPGFKHDGHSYTTMI-GILGQARQFGTMRK 387
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L DEM P+ +YN ++ A + E VK EM + D +TY T++D
Sbjct: 388 LLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHA 447
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ G AM L +Q L D +TY+ +++ L
Sbjct: 448 KGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCL 481
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 21/244 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ ++ + L+ A +F M + C P++ +YNI+ A ++ +N
Sbjct: 474 YSAMVNCLGKGGHLAAAYKLFCEMVEN---GCTPNLVTYNIMI-ALQAKARN-------Y 522
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L+K M G PD + + +++ H+++A +F +M +++ P+ Y
Sbjct: 523 ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM--RHDWAPDEPVYGL 580
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G A M + G P+ + NSL+SA ++ L M+ +
Sbjct: 581 LVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQG 640
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLED--DFGNSIR 413
TY T+L C +A M L +L I G+ L L D G ++R
Sbjct: 641 LVPSLQTY-TLLLSCCTEAQA--QMGLCCQLM---AITGHPAHMFLLYLPDAEPGGQNVR 694
Query: 414 HHLR 417
H R
Sbjct: 695 DHTR 698
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ +N+L F G + + R +F ++ G+ P + S N++I G +
Sbjct: 140 PNFFFFNVLMHGFCKVGG--------VGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAG 191
Query: 269 HVNDALRIFHQMGVVYN--YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V + R+ GV+ + P+ F++ LI+GLC +GR L DEM KG VP+
Sbjct: 192 AVEEGFRL---KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGV 248
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++ L+ G+V+ +KN M+ + D +TY +++ +C+ G EA +L+ E+
Sbjct: 249 TFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM 308
Query: 387 QNKNL-IDGYTYTKLLD 402
L D T+T L+D
Sbjct: 309 SASGLRPDRITFTTLID 325
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I +A + + M++ R P + +++ L G+ +
Sbjct: 180 FNTLISGCCKAGAVEEGFRLKGVMESERVC---PDVFTFSALINGLCKEGR--------L 228
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF +M G+ P+ + +I G V+ AL+ F QM + P+ +Y+
Sbjct: 229 DEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNF-QMMLAQGVRPDLVTYNA 287
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC G K AR L +EM G P ++ +L+ G++E ++ M+E+
Sbjct: 288 LINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEG 347
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+D + + ++ +CR GR +A ++L+++ + D TYT ++D
Sbjct: 348 IELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVD 395
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F+ M+ G+ PD+ + N++I G + +A R+ ++M P+ ++ LI G C
Sbjct: 270 FQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSA-SGLRPDRITFTTLIDGCC 328
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G ++A E+ M +G ++ L+S L +G V + + L +M+ D
Sbjct: 329 KYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDP 388
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
TY V+D C++G KLLKE+Q+ + G TY L++ L
Sbjct: 389 TYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGL 432
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
Y PN F ++ L+HG C G +AR + DE+ ++G P+ S+N+L+S G VEE
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEG 196
Query: 345 VKNLWEMIEKQRPV-DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+ L ++E +R D T+ +++ +C+ GR E L E+ K L+ +G T+T L+D
Sbjct: 197 FR-LKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLID 255
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 10/196 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
RP + +YN L G ++ R L +M G+ PD + ++I G
Sbjct: 279 RPDLVTYNALINGLCKVGD--------LKEARRLVNEMSASGLRPDRITFTTLIDGCCKY 330
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ AL I +M V + ++ LI GLC GR +A + +M GF P +
Sbjct: 331 GDMESALEIKRRM-VEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPT 389
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +V G V K L EM +TY +++ +C++G+ A LL +
Sbjct: 390 YTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAML 449
Query: 388 NKNLI-DGYTYTKLLD 402
N + + TY LL+
Sbjct: 450 NVGVAPNDITYNILLE 465
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 16/228 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + L A + M S +R I FT + G Y + M
Sbjct: 285 YNALINGLCKVGDLKEARRLVNEMSAS-------GLRPDRITFTTLID-GCCKYGD---M 333
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E+ + ++MV +GIE D + +I G V+DA R+ M + + P+ +Y
Sbjct: 334 ESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDM-LSAGFKPDDPTYTM 392
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ C +G +L EM+ G VP +YN+L++ L G+V+ L M+
Sbjct: 393 VVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVG 452
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
+ ITY +L+ + G + + E K L+ Y +YT L++
Sbjct: 453 VAPNDITYNILLEGHSKHGSSVDVDIFNSE---KGLVKDYASYTALVN 497
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 19/287 (6%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY 176
P+ LEL + PR +A TY+ + A Q +V+ +M + Y
Sbjct: 132 PVRALELLR---QMPR--PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTY 186
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
T+I + + ++ A VF M E PS YN L + RGK ++
Sbjct: 187 ATLISGWCKIGRMEDAAKVFDEMLTQG--EVAPSAVMYNALIGGYCDRGK--------LD 236
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDY 295
+ MV G+ + + N ++ + +DA + +M N L P+ F+Y+
Sbjct: 237 VALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQ--RNGLSPDVFTYNI 294
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C +G K A E+ +EM RKG ++ +Y SL+ A + G+V+ET + ++K
Sbjct: 295 LINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKG 354
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D + Y +++ C G A +++ E++ K + D TY L+
Sbjct: 355 IRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLI 401
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 20/265 (7%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
++ H + L +A + D+ L C T +N ++ K RA+ + +
Sbjct: 86 ASLHPLLSSLPSAPAFALFADIYRLRL---PLCTTT--FNIMLRHLCATGKPVRALELLR 140
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
M RP+ +YN + F +RG+ +E +R + ++ GI PD ++
Sbjct: 141 QMP-------RPNAVTYNTVIAGFCARGRV----QAALEVMREMRER---GGIAPDKYTY 186
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
++I G+ + DA ++F +M P++ Y+ LI G C +G+ A + ++M
Sbjct: 187 ATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMV 246
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
++G + +YN LV AL ++G + L EM D TY +++ C+ G
Sbjct: 247 QRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEK 306
Query: 378 EAMKLLKELQNKNL-IDGYTYTKLL 401
+A+++ +E+ K + TYT L+
Sbjct: 307 KALEVFEEMSRKGVRATAVTYTSLI 331
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 104/253 (41%), Gaps = 48/253 (18%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
KL A Y+E D+V + +A T A YN +++ + S A V + M+ RN
Sbjct: 234 KLDVALQYRE--DMVQRGVAM-----TVATYNLLVHALFMDGRASDAYAVLEEMQ--RN- 283
Query: 206 ECRPSIRSYNILFTAFLSRGKN--------------------TYINHVY--------MET 237
P + +YNIL + G TY + +Y ET
Sbjct: 284 GLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQET 343
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
R LFK V GI PD+ N++I + + A I +M P+ +Y+ LI
Sbjct: 344 DR-LFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEK-KRIPPDDVTYNTLI 401
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
G C GR AR L DEM ++G P L NG+ ++ + EM+ K
Sbjct: 402 RGFCLLGRLDEARGLIDEMTKRGIQPD--------LGLCKNGQGDDAENLMKEMVGKGIT 453
Query: 358 VDFITYRTVLDEI 370
D TY ++++ +
Sbjct: 454 PDDSTYISLIEGL 466
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 16/219 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN I + R+ + AV + + M P + +YN A G+ +
Sbjct: 113 YNIAIAACSNGRQWATAVRLLREMPTE---GVTPDVVTYNSAIAACSKGGR-------WK 162
Query: 236 ETIRCLFKQMV--NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
E + L QMV +GI PD+ + NS I +A+ + QM V PN +Y
Sbjct: 163 EAMD-LLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQM-VAQGVPPNLITY 220
Query: 294 DYLIHGLCAQGRT-KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ I G CA+GR + A +L +E+ +GF PS+++YN ++ A A G E + L +M+
Sbjct: 221 NSAI-GACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQML 279
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
P D I+Y +V+ R R EAM LL++++ + +
Sbjct: 280 TNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGV 318
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 21/255 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY+ ++E D++ QM+A P+ YN+ I A+ R+ A
Sbjct: 181 DVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLI----TYNSAIGACAKGRRWEEA 236
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + + + PS R+YN + A G+ ++E + L + + ND I
Sbjct: 237 MDLLEEVIEQ---GFPPSTRTYNPVIDACAKGGR-------WLEAMDLLGQMLTND-IPA 285
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG-RTKNARE 311
D+ S +S+I +A+ + QM PN SY+ I CA+G R K A +
Sbjct: 286 DVISYSSVIAACGRGRRWKEAMDLLEQM-RTQGVSPNVISYNSAIDA-CAKGDRWKEALD 343
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L EM G VP+ SYNS +A A+NG E ++ L EM + + I+Y + LD
Sbjct: 344 LLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACA 403
Query: 372 RRGRAGEAMKLLKEL 386
+ G+ +A+KLL+ +
Sbjct: 404 KGGQWEKAVKLLRGM 418
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 13/231 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+ I + + A+ +F+ M +R L P++ +YN + A ++G+
Sbjct: 465 YNSAIEACGRSARWQEAMGLFREMP-TRGLS--PNVVTYNSMIDA-CAKGEQ-------W 513
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L M G+ PD+ S NS I+ AL++ M P+ SY+
Sbjct: 514 ELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGM-PTRGPKPDIISYNS 572
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+ GR + A L +M G P++ SY + + A + + V+ L EM
Sbjct: 573 AVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHG 632
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLE 405
+ ITY +D ++GR EA+ LL +L+ + L D TY ++ +
Sbjct: 633 ATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQ 683
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 14/272 (5%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F TY+ + + E D++ QML T Y+++I R+ A
Sbjct: 248 FPPSTRTYNPVIDACAKGGRWLEAMDLLGQML-TNDIPADVISYSSVIAACGRGRRWKEA 306
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + + M R P++ SYN A ++G + E + L ++M G+ P
Sbjct: 307 MDLLEQM---RTQGVSPNVISYNSAIDA-CAKGDR------WKEALD-LLREMTTVGLVP 355
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ S NS ++ +AL + +M PN+ SY+ + G+ + A +L
Sbjct: 356 TVISYNSATAACAVNGRWVEALELLKEM-PAQGIAPNTISYNSALDACAKGGQWEKAVKL 414
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
M G P S+NS + A + E V+ L EM + ITY + ++ R
Sbjct: 415 LRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGR 474
Query: 373 RGRAGEAMKLLKELQNKNLIDG-YTYTKLLDV 403
R EAM L +E+ + L TY ++D
Sbjct: 475 SARWQEAMGLFREMPTRGLSPNVVTYNSMIDA 506
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 15/235 (6%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ G + +QE + +M T YN++I A+ + AV +
Sbjct: 464 TYNSAIEACGRSARWQEAMGLFREM-PTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTG 522
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M +R + P + SYN +A + GK E L K M G +PDI S N
Sbjct: 523 MP-ARGVA--PDVISYN---SAIEACGKGEQ-----WELALQLLKGMPTRGPKPDIISYN 571
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN-ARELCDEMK 317
S + S +AL + M V PN+ SY IH C +G + A + EM+
Sbjct: 572 SAVTACAKSGRWREALGLLKDMATV-GLTPNTVSYGAAIHA-CGKGEQWDVAVRILKEMQ 629
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
G P+ +Y++ + A A G +E V L ++ + D TY TV+ R
Sbjct: 630 THGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQR 684
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 21/242 (8%)
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLS---RAVYVFKYMKNSRNLECRP 209
++E D++ +M T L T+I + + + R V + +K P
Sbjct: 338 WKEALDLLREMT-------TVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAP 390
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+ SYN A G+ + + ++ L + M G +PDI S NS I
Sbjct: 391 NTISYNSALDACAKGGQ-------WEKAVK-LLRGMSTVGSDPDIISFNSAIDACGRGQQ 442
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
A+ + +M PN +Y+ I R + A L EM +G P+ +YN
Sbjct: 443 WETAVELLREMPTA-GLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYN 501
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE-AMKLLKELQN 388
S++ A A + E V+ L M + D I+Y + + E C +G E A++LLK +
Sbjct: 502 SMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAI-EACGKGEQWELALQLLKGMPT 560
Query: 389 KN 390
+
Sbjct: 561 RG 562
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 289 NSFSYDYLIHGLCAQGRT-KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
++ SY+ I C+ GR A L EM +G P +YNS ++A + G +E +
Sbjct: 109 DTTSYNIAIAA-CSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDL 167
Query: 348 LWEMIEKQRPV--DFITYRTVLDEICRRGRAGEAMKLLKELQNK----NLI--------- 392
L +M+ + D +TY + + GR EAM LL+++ + NLI
Sbjct: 168 LTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGAC 227
Query: 393 -DGYTYTKLLDVLED 406
G + + +D+LE+
Sbjct: 228 AKGRRWEEAMDLLEE 242
>gi|413942671|gb|AFW75320.1| hypothetical protein ZEAMMB73_530230 [Zea mays]
Length = 542
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + +Y + TA+ ++G +E + LF ++ G PD +I GY
Sbjct: 233 PDVVTYTTVLTAYCAKGD--------LEGAQQLFDDIIASGRRPDATMYTVLIDGYCHHR 284
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ DA RI +MG PN +Y +I C + ++ AR+L EM G+VP +
Sbjct: 285 KLQDAARIMDEMGAA-GVQPNEVTYSVVIEACCKERKSTEARDLTREMLGAGYVPDTPLC 343
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+V L +G+ E + +M++K P D T++ +C++G EA KL EL+
Sbjct: 344 AKVVDVLCQDGKAGEANEMWRQMVKKSVPPDNTVVSTLIYWLCKKGMVQEARKLFDELER 403
Query: 389 KNLIDGYTYTKLL 401
L TY L+
Sbjct: 404 GFLPSLLTYNSLI 416
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 14/231 (6%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+Y +I + RKL A + M + +P+ +Y+++ A K+T
Sbjct: 272 MYTVLIDGYCHHRKLQDAARIMDEMGAA---GVQPNEVTYSVVIEACCKERKST------ 322
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
R L ++M+ G PD ++ +A ++ QM V + P++
Sbjct: 323 --EARDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEMWRQM-VKKSVPPDNTVVS 379
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI+ LC +G + AR+L DE++R GF+PS +YNSL+ L NGE++E + +M+E+
Sbjct: 380 TLIYWLCKKGMVQEARKLFDELER-GFLPSLLTYNSLIIGLCENGELQEAGRVWDDMVER 438
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+ + +TY ++ C+ G++ E L KE+ ++ + Y L+D L
Sbjct: 439 RYEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFLYQALVDSL 489
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 120/276 (43%), Gaps = 18/276 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
R DA+ Y ++ + Q+ ++++M A E Y+ +I + RK + A
Sbjct: 267 RPDATMYTVLIDGYCHHRKLQDAARIMDEMGAA-GVQPNEVTYSVVIEACCKERKSTEAR 325
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ + M + + P + GK N ++ +QMV + PD
Sbjct: 326 DLTREMLGAGYVPDTPLCAK---VVDVLCQDGKAGEANEMW--------RQMVKKSVPPD 374
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
++++I V +A ++F ++ +LP+ +Y+ LI GLC G + A +
Sbjct: 375 NTVVSTLIYWLCKKGMVQEARKLFDELE--RGFLPSLLTYNSLIIGLCENGELQEAGRVW 432
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ-RPVDFITYRTVLDEICR 372
D+M + + P++ +Y +L+ G+ E EM+ + P F+ Y+ ++D + +
Sbjct: 433 DDMVERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMMSRGCTPSKFL-YQALVDSLSK 491
Query: 373 RGRAGEAMKLLK--ELQNKNLIDGYTYTKLLDVLED 406
+++ L+ ++ +DG+++ + + D
Sbjct: 492 PSHDDTVCTIVEAAALRGQDFLDGHSWEIFIKKMVD 527
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN S + L+ GL G +A ++ DEM G VP +Y ++++A G++E +
Sbjct: 198 PNLVSCNILLKGLVGIGDLNSALKVLDEMIGWGIVPDVVTYTTVLTAYCAKGDLEGAQQL 257
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++I R D Y ++D C + +A +++ E+
Sbjct: 258 FDDIIASGRRPDATMYTVLIDGYCHHRKLQDAARIMDEM 296
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 13/232 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E +Y+ +I+ +ARK+ A+ + MK + C P +YNIL G
Sbjct: 209 EVVYSALIHGLCKARKMDCALEMLAQMKKAF---CTPDTITYNILIDGLCKSGD------ 259
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ R F +M+ G +PD+++ N +I G+ + + + A +F M PN +
Sbjct: 260 --VAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSS-SRCSPNVVT 316
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GLC + + A MK +G P S Y+SLV L +G++E L++ +
Sbjct: 317 YGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCM-LFDEM 375
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
E+ + T ++ +C+ R EA+ L ++ + + Y Y ++ L
Sbjct: 376 ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISAL 427
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 116/270 (42%), Gaps = 20/270 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY + L K QE ++ ++ A TP+ A YN ++ + +L A
Sbjct: 33 DIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTI----ATYNALLNGLCKMGRLEEA 88
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + + + ++ C P + +Y L GK Y LFK+M + G+
Sbjct: 89 IDLLRKIVDN---GCTPDVVTYTSLIDGL---GKKKRSFEAYK-----LFKEMASRGLAL 137
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D ++I+G + + + A ++ M +P+ + +I GLC GR A +
Sbjct: 138 DTVCYTALIRGLLQAGKIPQASSVYKTM-TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRI 196
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
M+ +G P+ Y++L+ L +++ ++ L +M + D ITY ++D +C+
Sbjct: 197 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 256
Query: 373 RGRAGEAMKLLKE-LQNKNLIDGYTYTKLL 401
G A E L+ D YTY L+
Sbjct: 257 SGDVAAARAFFDEMLEAGCKPDVYTYNILI 286
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 121/304 (39%), Gaps = 54/304 (17%)
Query: 136 DASTYHIMTRKLGAAK----MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D TY + LG K Y+ ++ ++ LA + C Y +I +A K+ +
Sbjct: 103 DVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVC-----YTALIRGLLQAGKIPQ 157
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A V+K M + C P + + + + G+ +R +FK M G+
Sbjct: 158 ASSVYKTMTSQ---GCVPDVVTLSTMIDGLCKAGR-------IGAAVR-IFKSMEARGLA 206
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNYL---------------- 287
P+ +++I G + ++ AL + QM + YN L
Sbjct: 207 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAF 266
Query: 288 ----------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
P+ ++Y+ LI G C G T A + D+M P+ +Y +L+S L
Sbjct: 267 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCK 326
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTY 397
++ + M E+ P D Y +++D +C+ G+ L E++ + + T
Sbjct: 327 RRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTR 386
Query: 398 TKLL 401
T+L+
Sbjct: 387 TRLI 390
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L ++ +G DI + +++ + + +A+ + ++ P +Y+ L++GL
Sbjct: 21 LAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI-TANGCTPTIATYNALLNGL 79
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C GR + A +L ++ G P +Y SL+ L E K EM + +D
Sbjct: 80 CKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDT 139
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ Y ++ + + G+ +A + K + ++ + D T + ++D L
Sbjct: 140 VCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
++ LI+GL G A L E G +Y ++V LA N +++E V + ++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
TY +L+ +C+ GR EA+ LL+++ N D TYT L+D L
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 114
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 13/237 (5%)
Query: 155 EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
E + V+ +M+ F +Y T+I F KL +K E P ++
Sbjct: 198 EGEKVLREMMKRGVF-PDHVIYTTLIDGFC---KLGNTQAAYKLFSEMEAREIVPDSIAF 253
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ L GK + LF +M+ G EPD + ++I GY + A
Sbjct: 254 SALICGLSGSGKVVEADK--------LFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAF 305
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+ +QM V PN +Y L GLC G A EL EM RKG + +YN++V+
Sbjct: 306 FLHNQM-VQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNG 364
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
L G + + VK + EM E D ITY T++D + G +A +LL+E+ ++ L
Sbjct: 365 LCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGL 421
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
SYNIL + GK +H+ M R FK G PD+ S ++I GY +
Sbjct: 111 ESYNILMNSLFRLGKIREAHHLLM---RMEFK-----GCIPDVVSYTTIIDGYCHVGELQ 162
Query: 272 DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
+++ +M + PN ++Y +I LC G+ ++ EM ++G P Y +L
Sbjct: 163 KVVQLVKEMQL-KGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTL 221
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ G + K EM ++ D I + ++ + G+ EA KL E+ K
Sbjct: 222 IDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGF 281
Query: 392 -IDGYTYTKLLD 402
D TYT L+D
Sbjct: 282 EPDEVTYTALID 293
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L QMV G+ P++ + ++ G S ++ A + H+M N +Y+ +++GL
Sbjct: 307 LHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEM-CRKGLQLNISTYNTIVNGL 365
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G A +L +EMK G P + +Y +L+ A GE+ + + L EM+++
Sbjct: 366 CKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTV 425
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+T+ +++ +C G+ + +LLK + K ++ + TY ++
Sbjct: 426 VTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIM 467
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 109/238 (45%), Gaps = 13/238 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D+ + + L + E D + N+M+ F E Y +I + + ++ +A ++
Sbjct: 249 DSIAFSALICGLSGSGKVVEADKLFNEMIK-KGFEPDEVTYTALIDGYCKLGEMKKAFFL 307
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M + P++ +Y L G+ ++T L +M G++ +I
Sbjct: 308 HNQM---VQIGLTPNVVTYTALADGLCKSGE--------LDTANELLHEMCRKGLQLNIS 356
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N+++ G + ++ A+++ +M P++ +Y L+ G AREL E
Sbjct: 357 TYNTIVNGLCKAGNILQAVKLMEEMKEA-GLHPDTITYTTLMDAYYKTGEMVKARELLRE 415
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
M +G P+ ++N L++ L ++G++E+ + L M+EK + TY +++ + C R
Sbjct: 416 MLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIR 473
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F Q+GV +N + SY+ L++ L G+ + A L M+ KG +P SY +++
Sbjct: 101 FPQLGVCWN----TESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYC 156
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
GE+++ V+ + EM K + TY +++ +C+ G+ E K+L+E+ + + D
Sbjct: 157 HVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHV 216
Query: 396 TYTKLLD 402
YT L+D
Sbjct: 217 IYTTLID 223
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 18/221 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ + + ++ +A + + M + R L+ P++ ++N+L GK +
Sbjct: 393 YTTLMDAYYKTGEMVKARELLREMLD-RGLQ--PTVVTFNVLMNGLCMSGK--------L 441
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
E L K M+ GI P+ + NS++K Y + N++ + I+ M GVV P+S +
Sbjct: 442 EDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVV----PDSNT 497
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI G C K A L EM K F ++ SYN+L+ ++ E + EM
Sbjct: 498 YNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMR 557
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
+ Y +D G ++L E K L+D
Sbjct: 558 REGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCLLD 598
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
E + G +++SYN L+++L G++ E L M K D ++Y T++D C G
Sbjct: 100 EFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVG 159
Query: 375 RAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+ ++L+KE+Q K L YTY+ ++ +L
Sbjct: 160 ELQKVVQLVKEMQLKGLKPNLYTYSSIILLL 190
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 50/322 (15%)
Query: 126 WASKQPRFRH--------DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYN 177
W+ Q R D T+ ++ L + E +++ N+ML T YN
Sbjct: 299 WSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT-ITYN 357
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS-------------- 223
++I F++ +L A +F M C P + +++IL +
Sbjct: 358 SMIDGFSKQNRLDAAERMFYLMATK---GCSPDVITFSILIDGYCGAKRVDDGMKLLHEM 414
Query: 224 --RG----KNTYINHVY-------METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
RG TY ++ + L ++M++ G+ P++ + N+++ G + +
Sbjct: 415 SRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKL 474
Query: 271 NDALRIFHQMGVVYNYL----------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
DAL +F M L P+ +Y+ LI GL +G+ A EL +EM +G
Sbjct: 475 KDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRG 534
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
VP + +YNS++ L ++E + M K D +T+ T+++ C+ GR G+ +
Sbjct: 535 LVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGL 594
Query: 381 KLLKELQNKNLI-DGYTYTKLL 401
++ E+ + ++ + TY L+
Sbjct: 595 EVFCEMGRRGIVANAITYRTLI 616
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y TI+ + A+ + + M+ + +P++ Y+ + G+ T +
Sbjct: 215 YGTIVDGMCKMGDTVSALNLLRKMEEVSRI--KPNVVIYSAIIDGLWKDGRQTDAQN--- 269
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +M GI P++F+ N MI G+ S ++A R+ +M P+ ++
Sbjct: 270 -----LFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM-FERKMSPDVVTFSV 323
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+ L +G+ A EL +EM +G +P++ +YNS++ + ++ + + M K
Sbjct: 324 LINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKG 383
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D IT+ ++D C R + MKLL E+ + L+ + TYT L+
Sbjct: 384 CSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLI 430
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 16/228 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
++T+++ ++S A++ F + C+P++ ++ L G+ +
Sbjct: 149 FSTLLHGLCVEDRVSEALHFFHQI-------CKPNVIAFTTLMNGLCREGR-------VV 194
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +MV DG++P+ + +++ G AL + +M V PN Y
Sbjct: 195 EAV-ALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSA 253
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GL GR +A+ L EM+ KG P+ +YN +++ +G E + L EM E++
Sbjct: 254 IIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERK 313
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D +T+ +++ + + G+ EA +L E+ + +I + TY ++D
Sbjct: 314 MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMID 361
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + + S A + + M + P + ++++L A + GK +
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFERKM---SPDVVTFSVLINALVKEGK-------FF 335
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E L+ +M+ GI P+ + NSMI G+ N ++ A R+F+ M P+ ++
Sbjct: 336 EAEE-LYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMAT-KGCSPDVITFSI 393
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C R + +L EM R+G V ++ +Y +L+ G + + L EMI
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ +T T+LD +C G+ +A+++ K +Q +
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 18/218 (8%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSR-NLEC-------RP 209
D++ +M+++ C NT++ KL A+ +FK M+ S+ +L+ P
Sbjct: 444 DLLQEMISS-GVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEP 502
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
+++YNIL ++ GK + +Y ++M + G+ PD + NS+I G +
Sbjct: 503 DVQTYNILICGLINEGKFSEAEELY--------EEMPHRGLVPDTITYNSVIDGLCKQSR 554
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+++A ++F MG + P+ ++ LI+G C GR + E+ EM R+G V ++ +Y
Sbjct: 555 LDEATQMFDSMGS-KGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYR 613
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+L+ G + + EMI D IT R +L
Sbjct: 614 TLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNML 651
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 121/261 (46%), Gaps = 22/261 (8%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D T+ I+ AK + ++++M + Y T+I+ F + L+ A+ +
Sbjct: 387 DVITFSILIDGYCGAKRVDDGMKLLHEM-SRRGLVANTITYTTLIHGFCQLGNLNAALDL 445
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN-------D 248
+ M +S P++ + N L + GK +E + + K ++ +
Sbjct: 446 LQEMISSGVC---PNVVTCNTLLDGLCNNGKLKD----ALEMFKVMQKSKMDLDASHPFN 498
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGR 305
+EPD+ + N +I G I ++A ++ +M G+V P++ +Y+ +I GLC Q R
Sbjct: 499 DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLV----PDTITYNSVIDGLCKQSR 554
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A ++ D M KGF P ++ +L++ G V + ++ EM + + ITYRT
Sbjct: 555 LDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRT 614
Query: 366 VLDEICRRGRAGEAMKLLKEL 386
++ C+ G A+ + +E+
Sbjct: 615 LIHGFCQVGNINGALDIFQEM 635
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 18/227 (7%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
F E + L A+ +F YM SR L C I F L + + + L
Sbjct: 51 FHEIKGLDDAIDLFGYMVRSRPLPCV-------IDFCKLLG----VVVRMERPDVVISLH 99
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
++M I +I+S +IK + + + AL F ++ + P+ ++ L+HGLC
Sbjct: 100 RKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKI-TKLGFHPSLVTFSTLLHGLCV 158
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ R A ++ + P+ ++ +L++ L G V E V L M+E + IT
Sbjct: 159 EDRVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQIT 214
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVLEDD 407
Y T++D +C+ G A+ LL++++ + I + Y+ ++D L D
Sbjct: 215 YGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKD 261
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ A + A + M +C ++NIL F +N ++ V
Sbjct: 296 YNTVLKGLCSAERWEEAEDLLAEMFQE---DCPLDDVTFNILVDFFC---QNGLVDRVIE 349
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +QM+ G PD+ + ++I G+ V++A+ + M PN+ SY
Sbjct: 350 -----LLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSAC-GCKPNTISYTI 403
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC R +A+EL M ++G +P+ ++N+L++ + G E+ ++ L +M+
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG 463
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D I+Y TV+D + + G+ EA++LL + NK +
Sbjct: 464 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 499
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 123/282 (43%), Gaps = 32/282 (11%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFCGTEALYNTIIYFFAEARKLS 190
+A TY + R L A + + V+++M ATP C + I+
Sbjct: 107 NAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMC------HVILEAACRGGGFR 160
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
AV + + C + N++ +A +G E + L +++ + G
Sbjct: 161 SAVRALQVLHAKG---CTLDSGNCNLVVSAICEQG-------CVDEGVE-LLRKLPSFGC 209
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL---------PNSFSYDYLIHGLC 301
EPDI S N+++KG ++ +D + +M V+ L P+ Y +I G+C
Sbjct: 210 EPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGIC 269
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G + A ++ M G P+ YN+++ L EE L EM ++ P+D +
Sbjct: 270 KDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV 329
Query: 362 TYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLD 402
T+ ++D C+ G ++LL++ L++ + D TYT +++
Sbjct: 330 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVIN 371
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 125/304 (41%), Gaps = 35/304 (11%)
Query: 128 SKQPRF--RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
S+ P + + + Y+ + + L +A+ ++E +D++ +M + +N ++ FF +
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPL-DDVTFNILVDFFCQ 340
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG-----------------KNT 228
+ R + + + M C P + +Y + F G K
Sbjct: 341 NGLVDRVIELLEQMLEHG---CIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 397
Query: 229 YINHVYMETIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
I++ + C L M+ G P+ + N++I A+ +
Sbjct: 398 TISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLK 457
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
QM +V P+ SY +I GL G+T+ A EL + M KG P++ Y+S+ SAL+
Sbjct: 458 QM-LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSRE 516
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTY 397
G ++ ++ + + D Y V+ +C+R A+ + N + + TY
Sbjct: 517 GRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 576
Query: 398 TKLL 401
T L+
Sbjct: 577 TILI 580
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 14/177 (7%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G + + N+MI GY + V A R+ + V PN+++Y ++ LCA+G +
Sbjct: 71 GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVP----PNAYTYFPIVRSLCARGLIAD 126
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A + DEM +G + + ++ A G V+ L + K +D V+
Sbjct: 127 ALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVS 186
Query: 369 EICRRGRAGEAMKLLKELQN----------KNLIDGYTYTKLLDVLEDDFGNSIRHH 415
IC +G E ++LL++L + ++ G K D +E+ +R H
Sbjct: 187 AICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVH 243
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 143/338 (42%), Gaps = 51/338 (15%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
++ +Q+D ++ LE FN T+ I+ L ++ ++ +LA+ S
Sbjct: 49 LLKIQKDHVLSLEFFNSLKTLNPISLTLETHSIILHILTKKSKFKSAQSILRTLLASRSI 108
Query: 170 CGTEALYNTIIY-----------------FFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
L++T+++ +A K A VF MK+ L P++
Sbjct: 109 DLPGKLFDTLLFSYRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFL---PTVE 165
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRC---------------------------LFKQM 245
S N ++ L + Y E RC + ++M
Sbjct: 166 SCNAYLSSLLDFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREM 225
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLCAQG 304
+ GI P++ S N++I G+ ++ A ++ + MG N L PN +++ LIHG C +G
Sbjct: 226 ESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMG--KNGLEPNVVTFNSLIHGFCKEG 283
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ A EMK P++ +YN+L++ G K EM+ D +TY
Sbjct: 284 KLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYN 343
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
++ +C+ G+ +A L+KEL +NL+ + TY+ L+
Sbjct: 344 ALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALI 381
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N++I+ F + KL A F MK + P+ +YN L + G + VY
Sbjct: 272 FNSLIHGFCKEGKLHEANRFFSEMKV---MNVTPNTVTYNTLINGYGQVGNSNMAGKVYE 328
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +R +G++ DI + N++I G A + ++ N +PN+ +Y
Sbjct: 329 EMMR--------NGVKADILTYNALILGLCKEGKTKKAAFLVKELDK-ENLVPNASTYSA 379
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G CA+ + A +L M R G P+ +++ L SA N + E L +M +
Sbjct: 380 LISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARS 439
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D T + D +C+ G+ AMKL E++ + LI
Sbjct: 440 MASDSNTLLEIYDGLCQCGKENLAMKLCHEMEARRLI 476
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 12/226 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + + +K+ A F++ + R +PS +YN L A G+ +
Sbjct: 1263 YNILINGYCKDQKIDEA---FRFFEEMRPKGLKPSTVTYNTLIGALCQSGR--------V 1311
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
T + LF +M G + + ++ G + H+ +A+ +F + + PN +
Sbjct: 1312 RTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKT-EHKPNIEVFSI 1370
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G+C G+ + A + DE+ + G P + +YN L++ L G + E VK LW+M EK
Sbjct: 1371 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
D IT+ ++ + + EA++LL+E++N+N T +L
Sbjct: 1431 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 1476
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 130/304 (42%), Gaps = 42/304 (13%)
Query: 133 FRHDASTYHIMTRKL----GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
F DA T + + + G Q D++ + L G Y +I +ARK
Sbjct: 1012 FEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGL-----LGDAKTYGILINGLCKARK 1066
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC-------- 240
A+ + + MK + C+ + +Y ++ A G T ++ E I
Sbjct: 1067 TGLAIKLHEKMKGN----CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVV 1122
Query: 241 -------------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
FK+M GI D+++ NS+I G + + + M
Sbjct: 1123 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM- 1181
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
V + P++F++ LI GLC +G+ A+++ + M+ KG P +YN+L++ L L G++
Sbjct: 1182 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQL 1241
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKL 400
E+ K + ++ ++ +Y +++ C+ + EA + +E++ K L TY L
Sbjct: 1242 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTL 1301
Query: 401 LDVL 404
+ L
Sbjct: 1302 IGAL 1305
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 15/228 (6%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
+T + A KL VF + ++ +P + + NIL S V+
Sbjct: 947 DTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGG 1006
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
++ G EPD ++ +++KG + N + DA+++F +M L ++ +Y L
Sbjct: 1007 FLK--------RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEM-TKKGLLGDAKTYGIL 1057
Query: 297 IHGLCAQGRTKNARELCDEMKR--KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
I+GLC +T A +L ++MK KG V +Y ++ AL +G E + EMI
Sbjct: 1058 INGLCKARKTGLAIKLHEKMKGNCKGDV---FTYGMIIDALCKDGMTTEALDMFSEMIGA 1114
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D + Y +++D +CR GR EA++ KE++ + + D YTY L+
Sbjct: 1115 GILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLI 1162
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K++ EM Q L ++C ++ + L A+ +F+ +K + E +
Sbjct: 1314 AQKLFVEMQ-TCGQFLKLSTYC-------VLLDGLCKNGHLEEAMDLFQSIKKT---EHK 1362
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+I ++IL GK +E F ++ +G+EPD + N +I G
Sbjct: 1363 PNIEVFSILLDGMCRAGK--------LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKG 1414
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A+++ QM LP+S +++ +I L + A +L +EM+ + F P ++
Sbjct: 1415 MLSEAVKLLWQMEE-KGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSP-DEAV 1472
Query: 329 NSLVSALA 336
S++ LA
Sbjct: 1473 TSMLLCLA 1480
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 59/120 (49%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+ ++ + LIH C+ + ++GF P + + +LV + + + + V+
Sbjct: 979 PDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQL 1038
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDD 407
EM +K D TY +++ +C+ + G A+KL ++++ D +TY ++D L D
Sbjct: 1039 FDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKD 1098
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 18/269 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + L E + +M TP Y T+I ++ L A +
Sbjct: 149 DVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVS----YTTVINGLCKSGDLDSASRM 204
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M N C P + +Y+ L F G+ +E L M+ G P++
Sbjct: 205 LDQMTNRG---CTPDVVTYSSLIDGFCKGGE--------VERAMGLLDSMLKLGCRPNMV 253
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NS++ H+ A + +M + P+ SY+ I GLC R K A+ + D
Sbjct: 254 AYNSLLGALHRLGHIGKAEDMLVEMER-RGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 312
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +G P++ SY+ LV L E+++ + + + EK + VD + Y +LD +C+ GR
Sbjct: 313 MVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGR 372
Query: 376 AGEAMKLLKELQNKNLI--DGYTYTKLLD 402
EA L ++ ++ + D + Y +LD
Sbjct: 373 FDEACALFSKVLDEKICEPDVFFYNVMLD 401
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 16/234 (6%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T Y I+ +A + AV K + R+ C P+I +YN++ K
Sbjct: 79 TVVTYTNIVDGLCKAGRTKDAV---KLLDEMRDKGCSPNIYTYNVIVEGLCEERK----- 130
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
++ + + ++M G PD+ + NS IKG + V++A + +M V P+
Sbjct: 131 ---LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT----PDVV 183
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
SY +I+GLC G +A + D+M +G P +Y+SL+ GEVE + L M
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
++ + + Y ++L + R G G+A +L E++ + D +Y +D L
Sbjct: 244 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 9/190 (4%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C+P ++ IL + +E R L +M G PD N++I GY
Sbjct: 6 CQPDAFTFAILLRGLCRSNQ--------LEKARQLLGRMKEMGCVPDDAIYNALISGYSK 57
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ A + +M V + LP +Y ++ GLC GRTK+A +L DEM+ KG P+
Sbjct: 58 AKDFGQAFKFLAEM-VKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIY 116
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN +V L +++E K L EM + D +TY + + +C+ R EA K L +
Sbjct: 117 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM 176
Query: 387 QNKNLIDGYT 396
+ YT
Sbjct: 177 PVTPDVVSYT 186
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P++F++ L+ GLC + + AR+L MK G VP YN+L+S + + + K
Sbjct: 8 PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
L EM++ +TY ++D +C+ GR +A+KLL E+++K YTY +++ L
Sbjct: 68 LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++I F + ++ RA+ + M L CRP++ +YN L A G + +
Sbjct: 220 YSSLIDGFCKGGEVERAMGLLDSM---LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLV 276
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E M G PD+ S N+ I G + V A +F +M V PN+ SY
Sbjct: 277 E--------MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM-VERGCTPNASSYSM 327
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI-EK 354
L+ LC + +A L ++ + K + Y L+ L G +E +++ EK
Sbjct: 328 LVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEK 387
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
D Y +LD C+R + +A+++ K++ +N + T+ L+
Sbjct: 388 ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILV 434
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 33/240 (13%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF------------TAFLS 223
YN I +A ++ +A VF M C P+ SY++L +
Sbjct: 290 YNACIDGLCKAERVKKAKAVFDRMVERG---CTPNASSYSMLVEELCKKKELDDAITLVE 346
Query: 224 RGKNTY-INHVYMETIR--------------CLFKQMVNDGI-EPDIFSLNSMIKGYILS 267
+ + Y I + + T+ LF +++++ I EPD+F N M+ +
Sbjct: 347 QAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKR 406
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++ AL+I QM + N +++ L+HGLC R +A + M +GF+P +
Sbjct: 407 RQIDKALQIHKQM--LERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVT 464
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y +LV A+ G+ ++ E ++ D +TY ++ + A EA L +L
Sbjct: 465 YGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLD 524
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 113/228 (49%), Gaps = 15/228 (6%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN +I+ +++R + RA ++ M+ + P I +YN L + +G ++
Sbjct: 202 VYNCLIHACSKSRDVERAEFILNEMEVKGVV---PDIFTYNTLIALYCKKG-------LH 251
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
E + + +M +GI DI S NS+I G+ + +A+R+F G + + +PN +Y
Sbjct: 252 YEALS-VQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMF---GEIKDAIPNHVTYT 307
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI G C + A L + M KG P +YNS++ L +G + + K L EM E+
Sbjct: 308 TLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSER 367
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ D +T T+++ C+ G A+K ++ L + +TY L+
Sbjct: 368 KVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALI 415
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 128/304 (42%), Gaps = 66/304 (21%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM-----LATPSFC 170
+P F WA P + H + M L + ++ V+++M L++PS
Sbjct: 57 EPFFIFHFFKWAQSIPHYTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVL 116
Query: 171 GT-----------EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
+ + + I+ +A+++ AV VF+ M NL +P + + +L
Sbjct: 117 TSLVRIHDDPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLC-NL--KPHLHACTVLMN 173
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
+ L G + + VY K+MV DG+
Sbjct: 174 SLLKDGITSMVWKVY--------KRMVQDGV----------------------------- 196
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGR-TKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
+PN + Y+ LIH C++ R + A + +EM+ KG VP +YN+L++
Sbjct: 197 -------VPNIYVYNCLIHA-CSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKK 248
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYT 398
G E + +M + +D ++Y +++ C+ G+ EAM++ E+++ + + TYT
Sbjct: 249 GLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKDA-IPNHVTYT 307
Query: 399 KLLD 402
L+D
Sbjct: 308 TLID 311
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 23/253 (9%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A +M+ E+ D A P+ Y T+I + +A + A+ + + M ++ L
Sbjct: 289 AMRMFGEIKD------AIPN----HVTYTTLIDGYCKANEFEEALRL-REMMVAKGL--Y 335
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P + +YN + S G+ N L +M ++ D + N++I Y
Sbjct: 336 PGVVTYNSILRKLCSDGRIRDANK--------LLHEMSERKVQADSVTCNTLINAYCKIG 387
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+N AL+ +M + PNSF+Y LIHG C ++A+EL M GF P+ ++Y
Sbjct: 388 DLNSALKFKTKM-LEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTY 446
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ +V + + + E + K ++ YR ++ +C+ R A KLL ++
Sbjct: 447 SWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEG 506
Query: 389 KNLI-DGYTYTKL 400
K + D YT L
Sbjct: 507 KGISGDSVIYTSL 519
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 18/248 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY- 234
Y +I+ + ++RK+S+A V++ M + C P+I +Y L GK + +Y
Sbjct: 295 YTALIHAYLKSRKVSKANEVYEMMLSKG---CTPNIVTYTALIDGLCKAGKIEKASQIYK 351
Query: 235 --------METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
+ + F+ + EP++F+ +++ G + V +A + M V
Sbjct: 352 IMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSV-EGC 410
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
PN YD LI G C G+ A+E+ M G+ P+ +Y+SL+ L + ++ +K
Sbjct: 411 EPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALK 470
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLE 405
L +M+E + + Y ++D +C+ G+ EA KL+ ++ K + TYT ++
Sbjct: 471 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMI---- 526
Query: 406 DDFGNSIR 413
D FG S R
Sbjct: 527 DGFGKSGR 534
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P+ Y+ L GK V+ + C G +P++++ +S+I
Sbjct: 410 CEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLEC--------GYDPNVYTYSSLIDRLFK 461
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++ AL++ +M + + PN Y +I GLC G+T A +L M+ KG P+
Sbjct: 462 DKRLDLALKVLSKM-LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVV 520
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y +++ +G VE+ ++ L +M K +F+TYR +++ C G EA KLL+E+
Sbjct: 521 TYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580
Query: 387 QN 388
+
Sbjct: 581 KQ 582
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 144 TRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSR 203
+R L +++ +V+ +M+ + F + Y+ +I + A K+ +A +F+ MK R
Sbjct: 194 SRCLCGIGKFEKAYNVIREMM-SKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMK--R 250
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
N P + Y L +F G ++E R F +M DG P++ + ++I
Sbjct: 251 N-GIAPDVYVYTTLIDSFCKAG--------FIEQARNWFDEMERDGCAPNVVTYTALIHA 301
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF-- 321
Y+ S V+ A ++ M + PN +Y LI GLC G+ + A ++ MK++
Sbjct: 302 YLKSRKVSKANEVYEMM-LSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEI 360
Query: 322 ---------------VPSSKSYNSLVSALALNGEVEETVKNLWEM-IEKQRPVDFITYRT 365
P+ +Y +LV L +V+E L M +E P + + Y
Sbjct: 361 PDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEP-NHVVYDA 419
Query: 366 VLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLDVLEDD 407
++D C+ G+ EA ++ L+ + YTY+ L+D L D
Sbjct: 420 LIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKD 462
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 115/284 (40%), Gaps = 29/284 (10%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEAR 187
++ F D Y M L A +++E D + +M A S C L Y ++
Sbjct: 34 EKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRA--SSCLPNVLTYRILLCGCLNKE 91
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL R + M C PS R +N L A+ G Y L K+MV
Sbjct: 92 KLGRCKRILSMMITEG---CYPSPRIFNSLVHAYCRSGDYAYAYK--------LLKKMVQ 140
Query: 248 DGIEPDIFSLNSMIKGYILSNH-----VNDALRIFHQM---GVVYNYLPNS-FSYDYLIH 298
G +P N +I G S ++ A + + +M GVV N + S FS
Sbjct: 141 CGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFS-----R 195
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
LC G+ + A + EM KGF+P + +Y+ ++ L +VE+ + EM
Sbjct: 196 CLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D Y T++D C+ G +A E++ + TYT L+
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALI 299
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 102/251 (40%), Gaps = 27/251 (10%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE---ALYNTI 179
+ + AS +P + TY + L A +E D++ M S G E +Y+ +
Sbjct: 369 VVDGASNEP----NVFTYGALVDGLCKAYQVKEARDLLKSM----SVEGCEPNHVVYDAL 420
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLEC--RPSIRSYNILFTAFLSRGKNTYINHVYMET 237
I +A KL A VF M LEC P++ +Y+ L + ++
Sbjct: 421 IDGCCKAGKLDEAQEVFTTM-----LECGYDPNVYTYSSLIDRLFKDKR--------LDL 467
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ +M+ + P++ MI G ++A ++ M PN +Y +I
Sbjct: 468 ALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEE-KGCNPNVVTYTAMI 526
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
G GR + EL +M KG P+ +Y L++ G ++E K L EM + P
Sbjct: 527 DGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWP 586
Query: 358 VDFITYRTVLD 368
YR V++
Sbjct: 587 RHVAGYRKVIE 597
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 29/306 (9%)
Query: 94 AVSELPPRFNNEELCNVMT-LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKM 152
A+ +L F++E L +++ L+ +P CLE+FN ASKQ +FR D Y M L A+
Sbjct: 60 ALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARN 119
Query: 153 YQEMDDVVNQMLAT---------------PSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
YQ+ + +++A F + +++ I+ +AE + A++VF
Sbjct: 120 YQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFD 179
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
M N + PS+ S N L + + +G+N HVY QM++ + PD+F+
Sbjct: 180 NMGNYGRI---PSLLSCNSLLSNLVRKGENFVALHVY--------DQMISFEVSPDVFTC 228
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
+ ++ Y S +V+ A+ + N +Y+ LI+G G + + M
Sbjct: 229 SIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMS 288
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI-EKQRPVDFITYRTVLDEICRRGRA 376
+G + +Y SL+ G +EE ++++E++ EK+ D Y ++D CR G+
Sbjct: 289 ERGVSRNVVTYTSLIKGYCKKGLMEEA-EHVFELLKEKKLVADQHMYGVLMDGYCRTGQI 347
Query: 377 GEAMKL 382
+A+++
Sbjct: 348 RDAVRV 353
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 9/164 (5%)
Query: 240 CLFKQMVNDGIE---------PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
CL Q + + +E P+ N I G + + DA ++F + ++P+
Sbjct: 696 CLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDE 755
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
++Y LIHG G A L DEM KG +P+ +YN+L+ L G V+ + L +
Sbjct: 756 YTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHK 815
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
+ +K + ITY T++D + + G EAM+L +++ K L+ G
Sbjct: 816 LPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRG 859
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I + + + A +VF+ +K + + + Y +L + G+
Sbjct: 299 YTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ---HMYGVLMDGYCRTGQ-------IR 348
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +R + M+ G+ + NS+I GY S + +A +IF +M ++ P+ +Y+
Sbjct: 349 DAVR-VHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMND-WSLKPDHHTYNT 406
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C G A +LCD+M +K VP+ +YN L+ + G + V +LW+M+ K+
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD-VLSLWKMMLKR 465
Query: 356 RP-VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D I+ T+L+ + + G EAMKL + + + L+
Sbjct: 466 GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 23/210 (10%)
Query: 147 LGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
L K+ + +++ + L P+ +YN I +A KL A +F + +S
Sbjct: 697 LKTQKIAESVENSTPKKLLVPN----NIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF- 751
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
P +Y IL G IN + T+R +M GI P+I + N++IKG
Sbjct: 752 -IPDEYTYTILIHGCAIAGD---INKAF--TLR---DEMALKGIIPNIVTYNALIKGLCK 802
Query: 267 SNHVNDALRIFH---QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+V+ A R+ H Q G+ PN+ +Y+ LI GL G A L ++M KG V
Sbjct: 803 LGNVDRAQRLLHKLPQKGIT----PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVR 858
Query: 324 SSKSYN--SLVSALALNGEVEETVKNLWEM 351
S + + L+ EV+ + EM
Sbjct: 859 GSDKQGDVDIPKEVVLDPEVKLGSTGVIEM 888
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 31/186 (16%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---------LSRGK 226
YNT++ + A + A+ + M E P++ +YNIL + LS K
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQK---EVVPTVMTYNILLKGYSRIGAFHDVLSLWK 460
Query: 227 NTYINHVYMETIRC------------------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
V + I C L++ ++ G+ D +LN MI G
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
VN+A I + + + P +Y L HG G K A + + M+RKG P+ + Y
Sbjct: 521 KVNEAKEILDNVNI-FRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMY 579
Query: 329 NSLVSA 334
N+L+S
Sbjct: 580 NTLISG 585
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 13/234 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+YNTII E +++ A+ V K+MK + RP + +YN L T G
Sbjct: 185 VIYNTIIDSLCEKGQVNTALDVLKHMKK---MGIRPDVVTYNSLITRLFHSG-------T 234
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ + R L M+ GI PD+ + +++I Y + +A + +++M + + PN +Y
Sbjct: 235 WGVSARIL-SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM-IQRSVNPNIVTY 292
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LI+GLC G A+++ + + KGF P++ +YN+L++ V++ +K L M
Sbjct: 293 NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR 352
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
D TY T+ C+ G+ A K+L + + + D YT+ LLD L D
Sbjct: 353 DGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 12/176 (6%)
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ CL K M+ G EP I + S++ G+ N +A+ + Q+ V Y PN Y+ +
Sbjct: 133 ALSCLGK-MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI-VGLGYEPNVVIYNTI 190
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I LC +G+ A ++ MK+ G P +YNSL++ L +G + + L +M+
Sbjct: 191 IDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGI 250
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNK----------NLIDGYTYTKLLD 402
D IT+ ++D + G+ EA K E+ + +LI+G LLD
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+I +YN L N H ++ + + +V+ G P+ + N++I GY +
Sbjct: 287 PNIVTYNSLI--------NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAK 338
Query: 269 HVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
V+D ++I M GV ++F+Y+ L G C G+ A ++ M G P
Sbjct: 339 RVDDGMKILCVMSRDGVD----GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDM 394
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
++N L+ L +G++ + + L ++ + + V ITY ++ +C+ + +A L
Sbjct: 395 YTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCS 454
Query: 386 LQNKNLI-DGYTYTKLL 401
L K + D TY ++
Sbjct: 455 LALKGVSPDVITYITMM 471
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 13/217 (5%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K + A+ +F M S L PSI ++ L A K E + LF+ +
Sbjct: 59 KFNDALTLFCDMAESHPL---PSIVDFSRLLIAIAKLNK--------YEAVISLFRHLEM 107
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI D++S ++I + ++ AL +M + + P+ ++ L++G C R
Sbjct: 108 LGISHDLYSFTTLIDCFCRCARLSLALSCLGKM-MKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A L D++ G+ P+ YN+++ +L G+V + L M + D +TY +++
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 368 DEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDV 403
+ G G + ++L ++ + D T++ L+DV
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDV 263
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M DG++ D F+ N++ +GY + + A ++ +M V P+ ++++ L+ GLC G
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM-VSCGVHPDMYTFNILLDGLCDHG 408
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ A +++++ V +YN ++ L +VE+ + K D ITY
Sbjct: 409 KIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYI 468
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKN 390
T++ + R+ EA +L +++Q ++
Sbjct: 469 TMMIGLRRKRLWREAHELYRKMQKED 494
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 147/348 (42%), Gaps = 58/348 (16%)
Query: 97 ELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHD----ASTYHIMTRKLGAAKM 152
+L P F L +V L+E P V + F WA KQ ++ H S ++T K+
Sbjct: 111 KLSPNFVTFVLQSV-ELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKI 169
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
++ ++ L TE+ N++I F + ++V++ MK + PS+
Sbjct: 170 RLVFFELKDRGLLM-----TESAANSLIKSFGNLGLVEELLWVWRRMKENG---IDPSLY 221
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN L N +N +++E+ +F+ M I PD + N MIKGY + +
Sbjct: 222 TYNFLV--------NGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQK 273
Query: 273 ALRIFHQMGVVYNYLPNSF-----------------------------------SYDYLI 297
A+ F M + N P+ SY +I
Sbjct: 274 AMEKFRDME-MKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVI 332
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GLC Q + A + + M +KG + Y +L+ + + NG +EE ++ M +
Sbjct: 333 GGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFE 392
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +TY +++ +C+ GR + M+L +NK + I+ Y L+D L
Sbjct: 393 PDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGL 440
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 18/219 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I + RK A VF+ M CR ++ Y L ++ G M
Sbjct: 328 YSLVIGGLCKQRKCMEAYAVFETMNQKG---CRANVAIYTALIDSYSKNGS--------M 376
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF---HQMGVVYNYLPNSFS 292
E LF++M N+G EPD + + ++ G S ++D + +F GV N +
Sbjct: 377 EEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAIN----AMF 432
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GL GR ++A L +EM KG S YN+++ ALA +G++++ + M
Sbjct: 433 YASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRME 492
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
E+ T+ ++D + + + EA+K ++ +K +
Sbjct: 493 EEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGI 531
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 130/294 (44%), Gaps = 33/294 (11%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + L M+ E + V +++ YN +I + +A KL +A+ F+
Sbjct: 222 TYNFLVNGL-VNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRD 280
Query: 199 MKNSRNLECRPSIRSYNILFTA-FLSRGKNTYIN--------------HVYMETI----- 238
M+ +N+ +P +Y L A + R +T ++ H Y I
Sbjct: 281 ME-MKNV--KPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCK 337
Query: 239 --RCL-----FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+C+ F+ M G ++ ++I Y + + +A+R+F +M + P++
Sbjct: 338 QRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKN-EGFEPDAV 396
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y L++GLC GR + EL D + KG ++ Y SL+ L G +E+ EM
Sbjct: 397 TYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEM 456
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
EK D Y ++D + + G+ +A+ L ++ + YT+T L+D L
Sbjct: 457 SEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGL 510
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 16/234 (6%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T Y I+ +A + AV K + R+ C P+I +YN++ K
Sbjct: 111 TVVTYTNIVDGLCKAERTRDAV---KLLDEMRDKGCSPNIYTYNVIVEGLCEERK----- 162
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
++ + + ++M G PD+ + NS IKG + V++A + +M V P+
Sbjct: 163 ---LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT----PDVV 215
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
SY +I+GLC G +A + D M +G P +Y+SL+ GEVE + L M
Sbjct: 216 SYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 275
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
++ + + Y ++L + R G G+A +L E++ + D +Y +D L
Sbjct: 276 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 329
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 12/221 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN ++ + +A VF+ M + C+P ++ IL + +
Sbjct: 10 YNKLLLQLTREHRHDKASAVFQEMIDK---SCQPDAFTFAILLRGLCRSNQ--------L 58
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R L +M G PD N++I GY + A + +M V + LP +Y
Sbjct: 59 EKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM-VKNHCLPTVVTYTN 117
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ GLC RT++A +L DEM+ KG P+ +YN +V L +++E K L EM +
Sbjct: 118 IVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
D +TY + + +C+ R EA K L + + YT
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYT 218
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 27/277 (9%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + L E + +M TP Y T+I ++ L A +
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVS----YTTVINGLCKSGDLDSASRM 236
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+M N C P + +Y+ L F G+ +E L M+ G P++
Sbjct: 237 LDHMSNR---GCTPDVVTYSSLIDGFCKGGE--------VERAMGLLDSMLKLGCRPNMV 285
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NS++ H+ A + +M + P+ SY+ I GLC R K A+ + D
Sbjct: 286 AYNSLLGALHRLGHIGKAEDMLVEMER-RGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 344
Query: 316 MKRKGFVPSSKSYNSLV----------SALALNGEVEETVKNLWEMI-EKQRPVDFITYR 364
M +G P++ SY+ L+ L G +E +++ EK D Y
Sbjct: 345 MVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 404
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
+LD C+R + +A+++ K++ KN + T+ L+
Sbjct: 405 VMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILV 441
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 113/276 (40%), Gaps = 28/276 (10%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+++ L + E ++ +M A + YN+ I + ++ A
Sbjct: 149 TYNVIVEGLCEERKLDEAKKMLEEM-AVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLAR 207
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + P + SY + G +++ + M N G PD+ + +
Sbjct: 208 MPVT------PDVVSYTTVINGLCKSGD--------LDSASRMLDHMSNRGCTPDVVTYS 253
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
S+I G+ V A+ + M + PN +Y+ L+ L G A ++ EM+R
Sbjct: 254 SLIDGFCKGGEVERAMGLLDSM-LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER 312
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ-RP---------VDFITYRTVLD 368
+GF P SYN+ + L V++ M+E+ P VD + Y +LD
Sbjct: 313 RGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLD 372
Query: 369 EICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLD 402
+C+ GR EA L ++ ++ + D + Y +LD
Sbjct: 373 GLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLD 408
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 83/157 (52%), Gaps = 2/157 (1%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G E ++F+ N ++ + + A +F +M + + P++F++ L+ GLC + +
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEM-IDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
AR+L MK G VP YN+L+S + + + K L EM++ +TY ++D
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
+C+ R +A+KLL E+++K YTY +++ L
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGL 157
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 8/220 (3%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL--SRGKNTYINHV 233
YN I +A ++ +A VF M C P+ SY++L L + +
Sbjct: 322 YNACIDGLCKAERVKKAKAVFDRMVER---GCTPNASSYSMLIVDILLYTVLLDGLCKGG 378
Query: 234 YMETIRCLFKQMVNDGI-EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ LF +++++ I EPD+F N M+ + ++ AL+I QM + N +
Sbjct: 379 RFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM--LEKNCCNVVT 436
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
++ L+HGLC R +A + M +GF+P +Y +LV A+ G+ ++ E +
Sbjct: 437 WNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAV 496
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ D +TY ++ + A EA L +L + +
Sbjct: 497 KGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWV 536
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 15/296 (5%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
L N + DP + + LF K D TY+I+ L + D++N+M +
Sbjct: 413 LINALCKVGDPHLGIRLFEEM-KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESN 471
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
T YNTII + ++ A VF M +++ + R ++ ++N L L + K
Sbjct: 472 GCPRST-VTYNTIIDALCKKMRIEEAEEVFDQM-DAQGIS-RSAV-TFNTLIDG-LCKAK 526
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
++ L +QMV +G++P+ + NS++ Y ++ A I M +
Sbjct: 527 R-------IDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETM-TANGF 578
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+ +Y LI+GLC GRT+ A +L M+ KG P+ K+YN ++ +L + + +
Sbjct: 579 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALN 638
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRA-GEAMKLLKELQNKNLIDGYTYTKLL 401
EM E P D +TY+ V +CR G EA L E+ NK + ++ ++L
Sbjct: 639 LFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRML 694
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 155/374 (41%), Gaps = 83/374 (22%)
Query: 103 NNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQ 162
+ + L + Q DP L + N A + F ++ Y + +KLG A + M+ +V +
Sbjct: 55 DQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVRE 114
Query: 163 M---------LATPSFC-------------------------GTEA---LYNTIIYFFAE 185
M + SF G +A ++N ++ E
Sbjct: 115 MRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVE 174
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
KL V+ M R ++ P + + N L A L R + T + ++M
Sbjct: 175 GSKLKLLESVYNEM-TGRGIQ--PDVVTLNTLIKA-LCRAHQ-------VRTAVLMLEEM 223
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNYL---------- 287
+ G+ PD + ++++G+I + ALR+ +M GV N L
Sbjct: 224 SSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRV 283
Query: 288 ----------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
P+ +Y+ +HGLC G +A ++ D M ++G P +YN++
Sbjct: 284 EDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 343
Query: 332 VSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
++ L+ NGE++E + +M+++ D T+ T++ + + R EA+ L +EL K L
Sbjct: 344 INCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGL 403
Query: 392 -IDGYTYTKLLDVL 404
D YT+ L++ L
Sbjct: 404 SPDVYTFNILINAL 417
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 117/256 (45%), Gaps = 13/256 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D +T++ + L + +E D+ + L +N +I + + +
Sbjct: 371 DTTTFNTLIVALSSQNRLEEALDLARE-LTVKGLSPDVYTFNILINALCKVGDPHLGIRL 429
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ MK+S C P +YNIL S GK + L +M ++G
Sbjct: 430 FEEMKSS---GCTPDEVTYNILIDHLCSMGK--------LGNALDLLNEMESNGCPRSTV 478
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N++I + +A +F QM ++ +++ LI GLC R +A EL ++
Sbjct: 479 TYNTIIDALCKKMRIEEAEEVFDQMDA-QGISRSAVTFNTLIDGLCKAKRIDDATELIEQ 537
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M ++G P++ +YNS+++ G +++ L M +D +TY T+++ +C+ GR
Sbjct: 538 MVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGR 597
Query: 376 AGEAMKLLKELQNKNL 391
A+KLL+ ++ K +
Sbjct: 598 TQVALKLLRGMRIKGI 613
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 46/267 (17%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E + T++ F E + A+ V M + C P+ + N+L + G+
Sbjct: 232 ETTFTTLMQGFIEEGSIEAALRVKAKMMEA---GCSPTGVTVNVLINGYCKMGR------ 282
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------------ 280
+E +Q + DG EPD + N+ + G + HV+ AL++ M
Sbjct: 283 --VEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTY 340
Query: 281 -----------------GVVYNY-----LPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
G+V LP++ +++ LI L +Q R + A +L E+
Sbjct: 341 NTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTV 400
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
KG P ++N L++AL G+ ++ EM D +TY ++D +C G+ G
Sbjct: 401 KGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGN 460
Query: 379 AMKLLKELQNKNLI-DGYTYTKLLDVL 404
A+ LL E+++ TY ++D L
Sbjct: 461 ALDLLNEMESNGCPRSTVTYNTIIDAL 487
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 19/253 (7%)
Query: 105 EELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML 164
+ LC M ++E E+F+ Q R A T++ + L AK + +++ QM+
Sbjct: 485 DALCKKMRIEE----AEEVFDQMDAQGISRS-AVTFNTLIDGLCKAKRIDDATELIEQMV 539
Query: 165 ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR 224
YN+I+ + + + +A + + M + E + +Y L
Sbjct: 540 KE-GLQPNNITYNSILTHYCKQGNIKKAADILETM-TANGFEI--DVVTYGTLINGLCKA 595
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
G+ V ++ L + M GI P + N +I+ N++ DAL +F +M V
Sbjct: 596 GRT----QVALK----LLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEV- 646
Query: 285 NYLPNSFSYDYLIHGLC-AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
P++ +Y + LC G K A + EM KGF+P S+ L L G +
Sbjct: 647 GEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDY 706
Query: 344 TVKNLWEMIEKQR 356
+ + +IEK +
Sbjct: 707 LISAIELIIEKAK 719
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 38/318 (11%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
EDP L LF+ +Q FRH +Y + KL ++M+ ++ ++ M T C E+
Sbjct: 53 EDPEEALSLFHRYKEQ-GFRHYYPSYAALLYKLARSRMFDAVETILAHMKDTEMQC-RES 110
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
++ + + +AV +F M C +I+S+N L + + N ++
Sbjct: 111 VFIALFQHYGP----EKAVELFNRMPQ---FNCTRTIQSFNALLNVLIDNDRFDEANDIF 163
Query: 235 METIRC---------------------------LFKQMVNDGIEPDIFSLNSMIKGYILS 267
++ +F +M+ ++P + + NS+I
Sbjct: 164 GKSYEMGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRK 223
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++ A+ + MG + N +Y L+ GLC+ +T+ A++L +M +G +
Sbjct: 224 GDLDKAMALLEDMGQKGKH-ANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVN 282
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ L++ L G+VEE L EM +++ D +TY +++ +C+ G+A EA K+L E+Q
Sbjct: 283 FGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQ 342
Query: 388 NKNLI-DGYTYTKLLDVL 404
+ + TY ++D L
Sbjct: 343 IGGCVPNAATYRMVVDGL 360
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 118/287 (41%), Gaps = 49/287 (17%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKL 189
FR + T++IM + A + + +V ++ML PS YN++I F L
Sbjct: 171 FRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSV----VTYNSLIGFLCRKGDL 226
Query: 190 SRAVYVFKYM-------------------------KNSRNL-------ECRPSIRSYNIL 217
+A+ + + M + ++ L C+ ++ +L
Sbjct: 227 DKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVL 286
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
RGK +E + L +M ++PD+ + N +I +A ++
Sbjct: 287 MNDLGKRGK--------VEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVL 338
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
+M + +PN+ +Y ++ GLC G + A + + M P S+++N +V L
Sbjct: 339 LEMQI-GGCVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLK 397
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR-AGEAMKLL 383
+G ++ + L EM +++ D ++ T++ C + A E M +L
Sbjct: 398 SGNIDGSCFVLEEMEKRKLEFDLESWETIIKSACSENKGASELMTVL 444
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
++N + +A+ + A+++F M+ R P+I +Y L A G+ ++
Sbjct: 344 IFNIMFCAYAKKAMIDEAMHIFDKMRQQR---LSPNIVTYGALIDALCKLGR---VDDAV 397
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++ F QM+++G+ PDIF +S++ G + A +F ++ L F ++
Sbjct: 398 LK-----FNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVF-FN 451
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ LC +GR A+ L D M R G P SYN+LV L G ++E K L ++
Sbjct: 452 TLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSI 511
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D +TY T+L C+ R +A L +E+ K L D TY +L
Sbjct: 512 GLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 559
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME R L M+ G+ PD+ S N+++ G+ L+ +++A ++ + V P+ +Y+
Sbjct: 464 MEAQR-LIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVI-VSIGLKPDKVTYN 521
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+HG C R +A L EM KG P +YN+++ L G E + MI
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINS 581
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ ++ TY +++ +C+ EA K+ L +K+L +D +T ++ L
Sbjct: 582 RTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGAL 632
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
RP + SYN L G+ ++ L +V+ G++PD + N+++ GY +
Sbjct: 479 RPDVISYNTLVDGHCLTGR--------IDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKA 530
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
++DA +F +M ++ P+ +Y+ ++HGL GR A+EL M + +
Sbjct: 531 RRIDDAYSLFREM-LMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYT 589
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN +++ L N V+E K + K +D T ++ + + GR +AM L +
Sbjct: 590 YNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATIS 649
Query: 388 NKNLI-DGYTY 397
L+ D TY
Sbjct: 650 AYGLVPDVETY 660
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 121/278 (43%), Gaps = 17/278 (6%)
Query: 129 KQPRF--RHDASTYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTEALYNTIIYFFA 184
+ P F D +Y I+ + K +E ++++ M S Y T+I
Sbjct: 154 RMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLC 213
Query: 185 EARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQ 244
+A+ + RA VF++M + RP+ +Y L +LS GK + E ++ + ++
Sbjct: 214 KAQMVDRAKGVFQHMIDK---GVRPNNHTYTCLIHGYLSIGK-------WKEVVQ-MLQE 262
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M G++PD + ++ + +A IF + + PN Y L+HG +G
Sbjct: 263 MSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSV-IRKGIKPNVTIYGILLHGYATEG 321
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
D M G P +N + A A ++E + +M +++ + +TY
Sbjct: 322 SLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYG 381
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
++D +C+ GR +A+ ++ ++ + D + ++ L+
Sbjct: 382 ALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLV 419
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 2/158 (1%)
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN--YLPNSFSY 293
E L ++M G PD+FS + ++KG+ +AL + M + + PN +Y
Sbjct: 146 EATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTY 205
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+I GLC A+ + M KG P++ +Y L+ G+ +E V+ L EM
Sbjct: 206 TTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMST 265
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D Y +LD +C+ GR EA + + K +
Sbjct: 266 HGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGI 303
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 23/260 (8%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKL 189
+ D TY+ + A+ + + +ML TP YNTI++ + +
Sbjct: 513 LKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDV----VTYNTILHGLFQTGRF 568
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
S A ++ M NSR + +I +YNI+ KN +++ + +F + +
Sbjct: 569 SEAKELYLSMINSRT---QMNIYTYNIIINGLC---KNNFVDEAFK-----MFHSLCSKD 617
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
++ DIF+ N MI + DA+ +F + Y +P+ +Y + L +G +
Sbjct: 618 LQLDIFTANIMIGALLKGGRKEDAMDLFATISA-YGLVPDVETYCLIAENLIKEGSLEEL 676
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
EL M+ G P+S+ N+LV L G++ L ++ EK ++ T ++
Sbjct: 677 DELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISI 736
Query: 370 ICRRGRAGEAMKLLKELQNK 389
R GE +L K L K
Sbjct: 737 YSR----GEYQQLAKSLPEK 752
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 14/236 (5%)
Query: 176 YNTIIYFFAEARKLSRA---VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+N ++ + AR S + V +F M +++ PS +Y IL F G+ +
Sbjct: 54 FNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFA 113
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ ++ ++ VND + IFS ++KG + V++A I + + P+ FS
Sbjct: 114 AFGLILKTGWR--VNDTV---IFS--QLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFS 166
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKG---FVPSSKSYNSLVSALALNGEVEETVKNLW 349
Y L+ G C + R + A EL M G P+ +Y +++ L V+
Sbjct: 167 YSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQ 226
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
MI+K + TY ++ G+ E +++L+E+ L D Y Y LLD L
Sbjct: 227 HMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYL 282
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%), Gaps = 16/218 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFK--YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
YNT++ A + +A + Y KN C ++NIL F +N ++ V
Sbjct: 304 YNTVLKGICSADRWEKAEELLTEMYQKN-----CPLDDVTFNILVDFFC---QNGLVDRV 355
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
L +QM+ G PD+ + ++I G+ +++A+ + M PN+ SY
Sbjct: 356 IE-----LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSC-GCKPNTISY 409
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
++ GLC+ R +A EL M ++G +P+ ++N++++ L G VE+ ++ L +M+
Sbjct: 410 TIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLV 469
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D I+Y TV+D + + G+ EA++LL + NK +
Sbjct: 470 NGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 507
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 127/269 (47%), Gaps = 21/269 (7%)
Query: 128 SKQPRF--RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFA 184
S+ P + + + Y+ + + + +A +++ ++++ +M C + + +N ++ FF
Sbjct: 290 SRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQ--KNCPLDDVTFNILVDFFC 347
Query: 185 EARKLSRAVYVFKYMKNSRNLE--CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
+ + R + + + M LE C P + +Y + F G I+ M L
Sbjct: 348 QNGLVDRVIELLEQM-----LEHGCMPDVITYTTVINGFCKEG---LIDEAVM-----LL 394
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
K M + G +P+ S ++KG + DA + +M + LPN +++ +I+ LC
Sbjct: 395 KNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRM-IQQGCLPNPVTFNTIINFLCK 453
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+G + A EL +M G P SY++++ L G+ EE ++ L MI K + IT
Sbjct: 454 KGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVIT 513
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNL 391
Y ++ + R GR + +++ +Q+ +
Sbjct: 514 YSSMAFALAREGRIDKVIQMFDNIQDATI 542
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 16/274 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D T++I+ + + +++ QML C + + Y T+I F + + AV
Sbjct: 335 DDVTFNILVDFFCQNGLVDRVIELLEQMLE--HGCMPDVITYTTVINGFCKEGLIDEAVM 392
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ K M + C+P+ SY I+ S + L +M+ G P+
Sbjct: 393 LLKNMPSCG---CKPNTISYTIVLKGLCSTERWVDAEE--------LMSRMIQQGCLPNP 441
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N++I V A+ + QM +V P+ SY +I GL G+T+ A EL +
Sbjct: 442 VTFNTIINFLCKKGLVEQAIELLKQM-LVNGCNPDLISYSTVIDGLGKAGKTEEALELLN 500
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M KG P+ +Y+S+ ALA G +++ ++ + + D + Y V+ +C+R
Sbjct: 501 VMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRR 560
Query: 375 RAGEAMKLLKEL-QNKNLIDGYTYTKLLDVLEDD 407
A+ L + N + + TYT L+ L +
Sbjct: 561 ETDLAIDFLAYMVSNGCMPNESTYTALIKGLASE 594
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL---------PNSFSYDYLIHG 299
G E DI S N+++KG + D + +M V+ L P+ Y +I G
Sbjct: 216 GCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDG 275
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
+C +G + A E+ M G P+ YN+++ + E+ + L EM +K P+D
Sbjct: 276 ICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLD 335
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLD 402
+T+ ++D C+ G ++LL++ L++ + D TYT +++
Sbjct: 336 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN 379
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
+ N+M+ GY V A R+ + V PN+++Y ++ GLC +GR +A +
Sbjct: 84 VVDYNAMVAGYCRVGQVEAARRLAAAVPVP----PNAYTYFPVVRGLCGRGRIADALAVL 139
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM + VP Y+ ++ + +G ++ L + K +D V++ IC +
Sbjct: 140 DEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQ 199
Query: 374 GRAGEAMKLLKEL 386
G E +++L++L
Sbjct: 200 GCVDEGLEMLRKL 212
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI LC GRT +A D G YN++V+ G+VE + L +
Sbjct: 58 LIRSLCVAGRTADAVRALDA---AGNAAGVVDYNAMVAGYCRVGQVE-AARRLAAAVPV- 112
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
P + TY V+ +C RGR +A+ +L E+ +++ +
Sbjct: 113 -PPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCV 148
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 147/348 (42%), Gaps = 58/348 (16%)
Query: 97 ELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHD----ASTYHIMTRKLGAAKM 152
+L P F L +V L+E P V + F WA KQ ++ H S ++T K+
Sbjct: 109 KLSPNFVTFVLQSV-ELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKI 167
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
++ ++ L TE+ N++I F + ++V++ MK + PS+
Sbjct: 168 RLVFFELKDRGLLM-----TESAANSLIKSFGNLGLVEELLWVWRRMKENG---IDPSLY 219
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN L N +N +++E+ +F+ M I PD + N MIKGY + +
Sbjct: 220 TYNFLV--------NGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQK 271
Query: 273 ALRIFHQMGVVYNYLPNSF-----------------------------------SYDYLI 297
A+ F M + N P+ SY +I
Sbjct: 272 AMEKFRDME-MKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVI 330
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GLC Q + A + + M +KG + Y +L+ + + NG +EE ++ M +
Sbjct: 331 GGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFE 390
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D +TY +++ +C+ GR + M+L +NK + I+ Y L+D L
Sbjct: 391 PDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGL 438
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 18/219 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I + RK A VF+ M CR ++ Y L ++ G M
Sbjct: 326 YSLVIGGLCKQRKCMEAYAVFETMNQKG---CRANVAIYTALIDSYSKNGS--------M 374
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF---HQMGVVYNYLPNSFS 292
E LF++M N+G EPD + + ++ G S ++D + +F GV N +
Sbjct: 375 EEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAIN----AMF 430
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI GL GR ++A L +EM KG S YN+++ ALA +G++++ + M
Sbjct: 431 YASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRME 490
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
E+ T+ ++D + + + EA+K ++ +K +
Sbjct: 491 EEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGI 529
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 130/294 (44%), Gaps = 33/294 (11%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + L M+ E + V +++ YN +I + +A KL +A+ F+
Sbjct: 220 TYNFLVNGL-VNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRD 278
Query: 199 MKNSRNLECRPSIRSYNILFTA-FLSRGKNTYIN--------------HVYMETI----- 238
M+ +N+ +P +Y L A + R +T ++ H Y I
Sbjct: 279 ME-MKNV--KPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCK 335
Query: 239 --RCL-----FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+C+ F+ M G ++ ++I Y + + +A+R+F +M + P++
Sbjct: 336 QRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKN-EGFEPDAV 394
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y L++GLC GR + EL D + KG ++ Y SL+ L G +E+ EM
Sbjct: 395 TYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEM 454
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
EK D Y ++D + + G+ +A+ L ++ + YT+T L+D L
Sbjct: 455 SEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGL 508
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 34/314 (10%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA+K+ + HD STY + L + Y EM ++ +M+ P T +
Sbjct: 1095 VKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSD 1154
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME-- 236
++ A+ + +A+ +F +K + C+P ++YN + + G+ ++ +Y E
Sbjct: 1155 VVRMLGNAKMVRQAITIFYQIKTRK---CQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMS 1211
Query: 237 ----------------TIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ C L +M G++P +I + N
Sbjct: 1212 TEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDA 1271
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ AL +F +M Y P+ F+Y LI GL GR A EM+R+G P + N+
Sbjct: 1272 HGALSLFEEMRHQYCR-PDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNN 1330
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR-RGRAGEAMKLLKELQNK 389
+++ L G +++ +K EM + +TY T++ + + RA E + ++
Sbjct: 1331 MINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 1390
Query: 390 NL-IDGYTYTKLLD 402
+ +TY+ L+D
Sbjct: 1391 GISPSSFTYSILID 1404
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 128/308 (41%), Gaps = 50/308 (16%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALY-NTIIYFFAEARKLSRA 192
R D TY + R LG A E +M C + ++ N +I F +A +L A
Sbjct: 1287 RPDVFTYTELIRGLGKAGRIDEAYHFFCEMQR--EGCRPDTVFMNNMINFLGKAGRLDDA 1344
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTA-FLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
+ +F+ M+ L C PS+ +YN + A F S+ + + + F++M GI
Sbjct: 1345 MKLFQEMET---LRCIPSVVTYNTIIKALFESKSRASEVP--------SWFERMKESGIS 1393
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS----------- 292
P F+ + +I G+ +N + A+ + +M Y L ++
Sbjct: 1394 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 1453
Query: 293 ---------------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
Y +I L GR +A + DEM + G P +YN+L+S LA
Sbjct: 1454 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 1513
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYT 396
G ++E + + M E D +Y +L+ + + G AM++L ++ + D +
Sbjct: 1514 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 1573
Query: 397 YTKLLDVL 404
Y +L L
Sbjct: 1574 YNTVLGAL 1581
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 116/292 (39%), Gaps = 55/292 (18%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K++QEM+ + PS YNTII E++ SRA V + + +
Sbjct: 1344 AMKLFQEME----TLRCIPSVV----TYNTIIKALFESK--SRASEVPSWFERMKESGIS 1393
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP---------------- 252
PS +Y+IL F + ME L ++M G P
Sbjct: 1394 PSSFTYSILIDGFCKTNR--------MEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 1445
Query: 253 ------DIFS-------------LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
++F MIK + ++DA+ +F +M + P+ ++Y
Sbjct: 1446 RYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKL-GCAPDVYAY 1504
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L+ GL G A M+ G +P SYN +++ LA G ++ L M +
Sbjct: 1505 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 1564
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D ++Y TVL + G EA KL+KE+ D TY+ +L+ +
Sbjct: 1565 STVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI 1616
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 17/258 (6%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
K G ++ Q + D + + PS YNT++ + L + M S
Sbjct: 137 KEGNIRVAQSVFDAITKWGLRPSVVS----YNTLMSGYIRLGDLDEGFRLKSAMHAS--- 189
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
+P + +Y++L K M+ LF +M+ G+ P + ++I G+
Sbjct: 190 GVQPDVYTYSVLINGLCKEXK--------MDEANELFDEMLVXGLVPXGVTFTTLIDGHC 241
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V+ A+ I+ QM + + LP+ +Y+ LI+GLC +G K A L EM KG P
Sbjct: 242 KNGRVDLAMEIYKQM-LSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDK 300
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y +L+ G+++ ++ MI++ +D + Y ++ +C+ GR+ +A K+L+E
Sbjct: 301 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 360
Query: 386 LQNKNL-IDGYTYTKLLD 402
+ + D TYT +++
Sbjct: 361 MLSVGXKPDTRTYTMIIN 378
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F+Q + Y + + ++ L+H C +G + A+ + D + + G PS SYN+L+S
Sbjct: 112 FYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYI 171
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGY 395
G+++E + M D TY +++ +C+ + EA +L E+ L+ G
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGV 231
Query: 396 TYTKLLD 402
T+T L+D
Sbjct: 232 TFTTLID 238
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 22/251 (8%)
Query: 142 IMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKN 201
+ ++ AK + D +VN + P + Y T+I F + + A VF M
Sbjct: 175 VKVNQINVAKSF--FDQIVNDAVVKPD----ASTYTTMIRGFCKVGMIDNARKVFDEMI- 227
Query: 202 SRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC-LFKQMVNDGIEPDIFSLNSM 260
C P++ + N L + +G ME R L + M + PD + +++
Sbjct: 228 -----CEPNLITCNTLINGYCKKGD--------MENARIFLCRMMESKDCLPDTVTYSTL 274
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
I GY +N+A + M ++ PN ++Y+ +I+GLC +G AR L +M+ G
Sbjct: 275 IDGYCKKGELNEARKWMDGM-LIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNG 333
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
+ ++ S++ L++ G+ EE + EMI K +D + V+ C+ + EA+
Sbjct: 334 VKENVATHLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAI 393
Query: 381 KLLKELQNKNL 391
LLKE+Q K +
Sbjct: 394 SLLKEMQAKGI 404
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 133/280 (47%), Gaps = 26/280 (9%)
Query: 114 QEDPLVCLELFNWASK-QP---RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
Q +P L FNWAS P + H+ Y + L + ++ +++ + +F
Sbjct: 71 QPNPYQALFFFNWASNLNPNPNNYSHNHRCYVAIIDLLLSHSLFPIAKNLLEK---HGTF 127
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
++ L + +I + + A++ F +K + +C + S+N + +
Sbjct: 128 --SDLLVSKLIRAYGYSGDTKSAIFWFHKVKEIQQGKC---LFSWNAILGVLVK------ 176
Query: 230 INHVYMETIRCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
+N + + F Q+VND ++PD + +MI+G+ +++A ++F +M P
Sbjct: 177 VNQI--NVAKSFFDQIVNDAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEMICE----P 230
Query: 289 NSFSYDYLIHGLCAQGRTKNARE-LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
N + + LI+G C +G +NAR LC M+ K +P + +Y++L+ GE+ E K
Sbjct: 231 NLITCNTLINGYCKKGDMENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKW 290
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+ M+ + + TY ++ +C RG EA +LL +++
Sbjct: 291 MDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKMR 330
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 85/167 (50%), Gaps = 9/167 (5%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ---MGVVYNYLPNSFSYDYLI 297
L K+M GI + S N++++ + ++ A+ + Q MG LPN SY +I
Sbjct: 395 LLKEMQAKGISRSVGSFNAVLRILVEIGELDKAVLLLKQVKNMGC----LPNLVSYSTVI 450
Query: 298 HGLC-AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
GLC + GR + L D+M + GF + Y+ LV G E ++ ++ I K
Sbjct: 451 CGLCRSHGRMQEVAGLVDDMLQDGFEMDATLYSCLVGGFCEAGNEEMAMRAFYDSINKNY 510
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNK-NLIDGYTYTKLLD 402
++ ++ ++ +C +G+ EA ++ K++ + +L+D +Y ++LD
Sbjct: 511 VINLQSFSFFVNLMCGKGKVIEAEQIFKDMCRRCSLVDVDSYQRVLD 557
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 126/319 (39%), Gaps = 50/319 (15%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V F+ + DASTY M R M V ++M+ P+ NT
Sbjct: 182 VAKSFFDQIVNDAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEMICEPNLITC----NT 237
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
+I + + + A M S+ +C P +Y+ L + +G+ +
Sbjct: 238 LINGYCKKGDMENARIFLCRMMESK--DCLPDTVTYSTLIDGYCKKGE--------LNEA 287
Query: 239 RCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLP------- 288
R M+ G P++++ N++I G L +V++A R+ +M GV N
Sbjct: 288 RKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGVKENVATHLSILKG 347
Query: 289 ------------------------NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
++ ++ +I C + A L EM+ KG S
Sbjct: 348 LSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLLKEMQAKGISRS 407
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR-RGRAGEAMKLL 383
S+N+++ L GE+++ V L ++ + ++Y TV+ +CR GR E L+
Sbjct: 408 VGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQEVAGLV 467
Query: 384 KE-LQNKNLIDGYTYTKLL 401
+ LQ+ +D Y+ L+
Sbjct: 468 DDMLQDGFEMDATLYSCLV 486
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 79/194 (40%), Gaps = 46/194 (23%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ E +L +AV + K +KN + C P++ SY+ + +H M
Sbjct: 411 FNAVLRILVEIGELDKAVLLLKQVKN---MGCLPNLVSYSTVICGLCR-------SHGRM 460
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + L M+ DG E D + ++ G+ + + A+R F+ + NY+ N S+ +
Sbjct: 461 QEVAGLVDDMLQDGFEMDATLYSCLVGGFCEAGNEEMAMRAFYD-SINKNYVINLQSFSF 519
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
++ +C +G+ E E+ K +M +
Sbjct: 520 FVNLMCGKGKVI--------------------------------EAEQIFK---DMCRRC 544
Query: 356 RPVDFITYRTVLDE 369
VD +Y+ VLD+
Sbjct: 545 SLVDVDSYQRVLDD 558
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
+ C+P+ SY+I+ G+ + R LFK+M G+ PD+ S S+I G
Sbjct: 476 GINCKPNAISYSIIIDGLCKCGRE--------DEARELFKEMKALGVIPDVISYTSLIHG 527
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ S DA +F++M V P+ ++ LI LC +G+ A EL + M ++G +P
Sbjct: 528 FCRSGKWKDAKYLFNEM-VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 586
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
++ +Y +LV L +N + E + +M + D +TY T++ +C+ G A++L
Sbjct: 587 NTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELH 646
Query: 384 KEL 386
K++
Sbjct: 647 KKM 649
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I+ F + K A Y+F M ++ +P + ++++L GK N +
Sbjct: 521 YTSLIHGFCRSGKWKDAKYLFNEM---VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLE 577
Query: 236 ETIR-----------------C----------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
I+ C LF +M G PD+ + +++KG +
Sbjct: 578 VMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTG 637
Query: 269 HVNDALRIFHQM-------GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
++ AL + +M G N+ P+ SY +I GLC GR AREL EMK G
Sbjct: 638 NIKTALELHKKMLSDTGQYGT--NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 695
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
+P+ SY SL+ +G++E+ EM+++ ++ +TY ++ C+ G+ +A+
Sbjct: 696 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 52/270 (19%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I+ F + K +A +F M ++ +P + + ++L +GK N
Sbjct: 340 YTTLIHGFCLSGKWEKAKCLFNEM---LDVGIQPDVTTSSVLIDMLCKKGKVIEANK--- 393
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYL----- 287
L + ++ G PD+ + +++KG + + ++ A ++F +M G + N +
Sbjct: 394 -----LLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL 448
Query: 288 --------------------------------PNSFSYDYLIHGLCAQGRTKNARELCDE 315
PN+ SY +I GLC GR AREL E
Sbjct: 449 MKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKE 508
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
MK G +P SY SL+ +G+ ++ EM++ D T+ ++D +C+ G+
Sbjct: 509 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 568
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
EA +LL+ + + I + TYT L+ L
Sbjct: 569 VIEANELLEVMIQRGCIPNTVTYTTLVKGL 598
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 113/237 (47%), Gaps = 27/237 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ II + + A +FK MK L P + SY L F GK + + Y
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKA---LGVIPDVISYTSLIHGFCRSGK--WKDAKY- 539
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV---NDALRIFHQMGVVYNYLPNSFS 292
LF +MV+ G++PD+ + + +I V N+ L + Q G + PN+ +
Sbjct: 540 -----LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI----PNTVT 590
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y L+ GLC R A +L +M++ G +P +Y +L+ L G ++ ++ +M+
Sbjct: 591 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 650
Query: 353 EKQ-------RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+P D I+Y ++D +C+ GR EA +L KE++ +I + +YT L+
Sbjct: 651 SDTGQYGTNFKP-DVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLI 706
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 18/219 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I ++S A +F MK L CRP +Y L GK H++
Sbjct: 48 YSTLIKGLCMKHRISEATQLFMSMKK---LGCRPDAIAYGTLMKGLCQTGKINIALHLHQ 104
Query: 236 ETIRCLFKQMVND----GIE--PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
E M+ND GI+ P + S + +I G ++A +F +M +P+
Sbjct: 105 E--------MLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKA-QGMMPD 155
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
SY LIHG C G+ + A+ L +EM G + + L+ L G+V E + L
Sbjct: 156 VISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLE 215
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
MI++ +D +TY T++ +C + R EA +L +Q
Sbjct: 216 VMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQK 254
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 114/262 (43%), Gaps = 36/262 (13%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSR------------NLECRPS-IRSYNILFTAFL 222
Y ++I+ F + K +A +F M + ++ C+ + N L +
Sbjct: 159 YTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMI 218
Query: 223 SRG------------KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
RG K + H E R LF M G PD + +++KG + ++
Sbjct: 219 QRGCILDIVTYSTLIKGLCMKHRISEATR-LFMSMQKLGCRPDAIAYGTLMKGLCQTGNI 277
Query: 271 NDALRIFHQM-------GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
N AL++ +M G+ P SY +I GLC R AREL EMK +G +P
Sbjct: 278 NTALQLHQEMLNDTGRYGIKCK--PTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMP 335
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
SY +L+ L+G+ E+ EM++ D T ++D +C++G+ EA KLL
Sbjct: 336 DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 395
Query: 384 KELQNKNLI-DGYTYTKLLDVL 404
+ + + I D T T L+ L
Sbjct: 396 EVVIQRGCIPDVVTCTTLVKGL 417
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-NTYINHVY 234
Y+T+I ++S A +F M + L CRP +Y L G NT +
Sbjct: 229 YSTLIKGLCMKHRISEATRLFMSM---QKLGCRPDAIAYGTLMKGLCQTGNINTALQ--- 282
Query: 235 METIRCLFKQMVND----GIE--PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
L ++M+ND GI+ P + S + +I G ++A +F +M +P
Sbjct: 283 ------LHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKA-QGIMP 335
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ SY LIHG C G+ + A+ L +EM G P + + L+ L G+V E K L
Sbjct: 336 DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 395
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+I++ D +T T++ +C + R +A +L ++Q
Sbjct: 396 EVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQK 435
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 18/219 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRN---LECRPSIRSYNILFTAFLSRGKNTYINH 232
Y T++ + K++ A+++ + M N + ++C+P++ SY+I+ +
Sbjct: 83 YGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRRE----- 137
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPN 289
+ R LFK+M G+ PD+ S S+I G+ S A +F++M G+ + +
Sbjct: 138 ---DEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTS 194
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
S LI LC +G+ A EL + M ++G + +Y++L+ L + + E +
Sbjct: 195 SM----LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFM 250
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
M + D I Y T++ +C+ G A++L +E+ N
Sbjct: 251 SMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLN 289
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-------GVVYNYLPNSFSY 293
LF M G PD + +++KG + +N AL + +M G+ P SY
Sbjct: 67 LFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCK--PTLVSY 124
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+I GLC R AREL EMK +G +P SY SL+ +G+ E+ EM++
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
D T ++D +C+ G+ EA +LL+ + Q ++D TY+ L+ L
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 236
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 19/235 (8%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
T++ ++S+A +F M + L C P++ + L G + +E
Sbjct: 411 TTLVKGLCMKHRISKATQLFLKM---QKLGCMPNVVTCATLMKGLCQSGNI----KIALE 463
Query: 237 TIRCLFKQMVND----GI--EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
L K M++D GI +P+ S + +I G ++A +F +M + +P+
Sbjct: 464 ----LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKAL-GVIPDV 518
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
SY LIHG C G+ K+A+ L +EM G P +++ L+ L G+V E + L
Sbjct: 519 ISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 578
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
MI++ + +TY T++ +C R EA +L ++Q L D TY L+ L
Sbjct: 579 MIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 633
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 49/101 (48%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+ + LI C +G+ A EL + M ++G + +Y++L+ L + + E +
Sbjct: 8 PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
M + D I Y T++ +C+ G+ A+ L +E+ N
Sbjct: 68 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLN 108
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+I++ +AR + +A V + M ++ +P +Y + + G+ +
Sbjct: 310 YNSIVHALCKARAMDKAELVLRQMFDN---SIQPDEVTYTAMIHGYSCLGR-------WK 359
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +FK+M +G+ PDI + NS++ +A IFH + + P+ SY
Sbjct: 360 EAAK-MFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIAT-KGHKPDIISYSI 417
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+HG +GR + L M G V S +N L++A A G ++E + EM +
Sbjct: 418 LLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQG 477
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ +TY TV+ +CR GR +AM+ L ++ + L
Sbjct: 478 VSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGL 513
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L +M G PD FS N++IK + +AL + +M P+ SY
Sbjct: 218 EALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTM 277
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+IHGL +G A L +EM +KG VP+ +YNS+V AL +++ L +M +
Sbjct: 278 VIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS 337
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
D +TY ++ GR EA K+ KE+ + LI D T+ L+D L
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSL 387
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F +++ G PDIF+ NS+I GY L ++ A + M V P+ +Y LI+G
Sbjct: 575 VFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAM-VSAGTEPDVVTYSTLINGY 633
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
GR + L EM K P++ +Y+ ++ L G K EMIE +
Sbjct: 634 FKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSI 693
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
TY +L +CR EA+ L +L NL
Sbjct: 694 STYTIILQGLCRNNCTDEAITLFHKLGAMNL 724
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 12/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + A+ + ++ ++ C P + SY ++ G+ + +
Sbjct: 239 YNTVIKSLCGGSRSQEALDML--LRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACN--- 293
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +MV G+ P++ + NS++ + ++ A + QM + P+ +Y
Sbjct: 294 -----LFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQM-FDNSIQPDEVTYTA 347
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+IHG GR K A ++ EM R+G +P ++NSL+ +L + +E + + K
Sbjct: 348 MIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKG 407
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D I+Y +L GR + L + + ++ D + + L++
Sbjct: 408 HKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILIN 455
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 124/276 (44%), Gaps = 21/276 (7%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQM----LATPSFCGTEALYNTIIYFFAEARKL 189
+ D +Y I+ + +M+++ + M + S C +N +I A+ +
Sbjct: 409 KPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHC-----FNILINAHAKRGMM 463
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A+ +F M R P++ +Y + A G+ ME + QM++ G
Sbjct: 464 DEALLIFTEM---RGQGVSPNVVTYATVIAALCRMGRLAD----AMEKL----SQMISIG 512
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
++P+ +S+I+G+ + A + +M PN + +IH LC +GR NA
Sbjct: 513 LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNA 572
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+++ + + G P ++NSL+ L G++++ L M+ D +TY T+++
Sbjct: 573 QDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLING 632
Query: 370 ICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ GR + + L +E+ K + TY+ +LD L
Sbjct: 633 YFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGL 668
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR-IFHQMGVVYNYLPNSFSYDYLIHG 299
F +++ G+ D N+ +K + ++AL + H+M + +P++FSY+ +I
Sbjct: 187 FFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSEL-GCVPDAFSYNTVIKS 245
Query: 300 LCAQGRTKNARELCDEM-KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
LC R++ A ++ M K G P SY ++ L + GE+ + EM++K
Sbjct: 246 LCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVP 305
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ +TY +++ +C+ +A +L+++ + ++ D TYT ++
Sbjct: 306 NVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMI 349
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/227 (18%), Positives = 92/227 (40%), Gaps = 49/227 (21%)
Query: 152 MYQEMDDVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
+ +MD + A S GTE Y+T+I + ++ ++ + +F+ M R +
Sbjct: 600 LVGKMDKAFGVLDAMVS-AGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKR---VK 655
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+ +Y+++ G+ + + +F +M+ G I + +++G +N
Sbjct: 656 PTTVTYSLVLDGLFRAGRTS--------AAKKMFHEMIESGTAMSISTYTIILQGLCRNN 707
Query: 269 HVNDALRIFHQMGVV----------------------------------YNYLPNSFSYD 294
++A+ +FH++G + +PN+ +Y
Sbjct: 708 CTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYG 767
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
+I L +G + A + M++ G PSS+ N ++ L GE+
Sbjct: 768 VMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEI 814
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 111/221 (50%), Gaps = 13/221 (5%)
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFK-Q 244
A+ + ++ + +N P I +YNIL + SRG + H +E FK Q
Sbjct: 99 AKPTESIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRG----MLHAALE-----FKNQ 149
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
++ + P + + +I+ +L +++A+++ +M + N P+ F Y+ +I +C +G
Sbjct: 150 LLKENFNPTVVTYTILIEATLLQGGIDEAIKLLDEMFEI-NLQPDVFPYNSIIX-MCREG 207
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
A E+ + KG+ +YN L+ +L G+ E + + +M+ K + +TY
Sbjct: 208 YVDRAFEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYS 267
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
++ +CR G+ E + LLK+++ K L DGY Y L+ VL
Sbjct: 268 VLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVL 308
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 106/267 (39%), Gaps = 49/267 (18%)
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
YQ +D + N+ F YN +I +R + A FK N P++
Sbjct: 109 YQVLDRMKNK-----GFSPDIVTYNILIGSLC-SRGMLHAALEFKNQLLKENF--NPTVV 160
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMI----------- 261
+Y IL A L +G E I+ L +M ++PD+F NS+I
Sbjct: 161 TYTILIEATLLQGG-------IDEAIK-LLDEMFEINLQPDVFPYNSIIXMCREGYVDRA 212
Query: 262 ---------KGYILSNHV-NDALRIFHQMG------------VVYNYLPNSFSYDYLIHG 299
KGY L N LR G V N +Y LI
Sbjct: 213 FEVISSISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISS 272
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC G+ + L +MK+KG P Y+ L++ L G V+ ++ L MI D
Sbjct: 273 LCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPD 332
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKEL 386
+ Y T+L +C++ RA EA+ + ++L
Sbjct: 333 IVNYNTILACLCKQKRADEALSIFEKL 359
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNTI+ + ++ A+ +F+ + + C P+ SYN +F+A S G + +
Sbjct: 336 YNTILACLCKQKRADEALSIFEKLGE---VGCSPNASSYNTVFSALGSSGHKVRALGMIL 392
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
E + D ++PD+ + NS+I V++A+ + M + + P+ SY+
Sbjct: 393 EML---------DXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYN 443
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
++ GLC GR +A E+ M KG +P+ +Y L+ + G
Sbjct: 444 IVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGG 488
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 120/303 (39%), Gaps = 53/303 (17%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRA 192
D TY+I+ R L ++ ++++ M+A G EA Y+ +I K+
Sbjct: 227 DVITYNILLRSLXNQGKWEAGFELMSDMVAK----GCEANVVTYSVLISSLCRDGKVEEG 282
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V + K MK + LE P Y+ L G+ V M++DG P
Sbjct: 283 VGLLKDMKK-KGLE--PDGYCYDPLIAVLCKEGRVDLAIEV--------LDVMISDGCVP 331
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVV--------YNYL----------------- 287
DI + N+++ ++AL IF ++G V YN +
Sbjct: 332 DIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMI 391
Query: 288 --------PNSFSYDYLIHGLCAQGRTKNARELCD--EMKRKGFVPSSKSYNSLVSALAL 337
P+ +Y+ LI LC G A EL EM+ PS SYN ++ L
Sbjct: 392 LEMLDXVDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCR 451
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTY 397
G V + + L M++K + TY +++ I G +A L L N + I +++
Sbjct: 452 VGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLVNMDAISEHSF 511
Query: 398 TKL 400
+L
Sbjct: 512 ERL 514
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 121/327 (37%), Gaps = 81/327 (24%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF------ 182
K F D TY+I+ L + M + NQ+L +F T Y +I
Sbjct: 116 KNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKE-NFNPTVVTYTILIEATLLQGG 174
Query: 183 FAEARKLSRAVY-------VFKYMKNSRNLECRPS--------------------IRSYN 215
EA KL ++ VF Y NS CR + +YN
Sbjct: 175 IDEAIKLLDEMFEINLQPDVFPY--NSIIXMCREGYVDRAFEVISSISSKGYALDVITYN 232
Query: 216 ILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALR 275
IL + ++GK E L MV G E ++ + + +I V + +
Sbjct: 233 ILLRSLXNQGK--------WEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVG 284
Query: 276 IFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV------------- 322
+ M P+ + YD LI LC +GR A E+ D M G V
Sbjct: 285 LLKDMKK-KGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACL 343
Query: 323 ----------------------PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
P++ SYN++ SAL +G + + EM++ P D
Sbjct: 344 CKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXVDP-DV 402
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQ 387
I Y +++ +CR G EA++LL +++
Sbjct: 403 IAYNSLISCLCRDGMVDEAIELLVDME 429
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETI--RCLFKQMVNDGIEPDIFSLNSMIKGYI 265
RP + ++N L + + +Y + + R LF GI PD++S N +I GY
Sbjct: 320 RPDLVTFNTLMSGYC----------LYNDVVEARKLFDTFAECGITPDVWSYNILIIGYC 369
Query: 266 LSNHVNDALRIFHQMGVVYNYL-PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+N +++AL +F++M Y L PN +Y LI GLC GR A EL + G P+
Sbjct: 370 KNNRIDEALSLFNKMN--YKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPN 427
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+YN ++ AL V++ ++ M E+ + +Y +++ C+ R EAM L +
Sbjct: 428 VITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFE 487
Query: 385 ELQNKNLI-DGYTYTKLLDVL 404
E+ +NL+ D TY L+D L
Sbjct: 488 EMHRRNLVPDSVTYNCLIDGL 508
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + + ++ A+ +F M N + L P+I +Y+ L G+ +Y
Sbjct: 361 YNILIIGYCKNNRIDEALSLFNKM-NYKKLA--PNIVTYSSLIDGLCKSGRISYAWE--- 414
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF + + G P++ + N M+ V+ A+ +F+ M PN SY+
Sbjct: 415 -----LFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLM-FERGLTPNVSSYNI 468
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C R A L +EM R+ VP S +YN L+ L +G + + M +
Sbjct: 469 LINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGG 528
Query: 356 RPVDFITYRTVLDEICR 372
PVD ITY + D +
Sbjct: 529 PPVDVITYNILFDAFSK 545
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 23/290 (7%)
Query: 126 WASKQPRFRHDASTYHIMTR------KLGAAKM--YQEMDDVVNQM--LATPSFCGTEAL 175
+A+ R R+ S + + R K A K + +DD V L T +
Sbjct: 21 YAATTTRLRYAISKFSVFLRFFSDSQKQNAKKKSGFDAIDDAVALFTRLITMHPLPSVVE 80
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N I+ + + A+ + K M R + PSI + +IL N Y + +M
Sbjct: 81 FNMILGSIVKMKHYPTAISLSKQM-GLRGIT--PSIVTLSILI--------NCYCHLGHM 129
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ ++ G + + +L +++KG ++ V AL FH V +L + +Y
Sbjct: 130 GFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALE-FHDSVVAQGFLLDEVTYGT 188
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC G T+ A EL +M+ + P+ YN +V L +G V E +++ +
Sbjct: 189 LINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRG 248
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D TY ++ C G+ E +LL ++ ++N+ ++ YTY L+D L
Sbjct: 249 IDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 18/249 (7%)
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
D VV Q F E Y T+I K+ F+ + RP++ YN+
Sbjct: 172 DSVVAQ-----GFLLDEVTYGTLINGLC---KIGLTREAFELLHKMEGQVVRPNVVIYNM 223
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
+ G T R L+ +V GI+PD+F+ +I G+ + R+
Sbjct: 224 IVDGLCKDGLVT--------EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRL 275
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
M V N N ++Y+ LI LC +G A ++ + M +G P ++N+L+S
Sbjct: 276 LCDM-VDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYC 334
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-Y 395
L +V E K E D +Y ++ C+ R EA+ L ++ K L
Sbjct: 335 LYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIV 394
Query: 396 TYTKLLDVL 404
TY+ L+D L
Sbjct: 395 TYSSLIDGL 403
>gi|341605745|gb|AEK82975.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
Length = 208
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 13/203 (6%)
Query: 201 NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM 260
+ + ++ P + ++++ GK +N Y +F+ M+ G +P++ +
Sbjct: 9 DEKGIQVPPHV--FSLVIGGLCKEGK---LNEGY-----AVFENMIRKGSKPNVAIYTVL 58
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
I GY S V DA+R+ H+M + + P+ +Y +++GLC GR + A + + G
Sbjct: 59 IDGYAKSGSVEDAIRLLHRM-IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNG 117
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
F +S Y+SL+ L G ++E + EM EK D Y ++D + + G+ EAM
Sbjct: 118 FAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAM 177
Query: 381 KLLKELQNKNLIDG--YTYTKLL 401
L K ++ + D YTYT L+
Sbjct: 178 TLFKRMEEEEGCDQTVYTYTILI 200
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P+ FS +I GLC +G+ + + M RKG P+ Y L+ A +G VE+ ++
Sbjct: 17 PHVFSL--VIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRL 74
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGYTYTKLLDVL 404
L MI++ D +TY V++ +C+ GR EA+ + + N I+ Y+ L+D L
Sbjct: 75 LHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFAINSMFYSSLIDGL 132
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 10/206 (4%)
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
Y++N P ++SY ++ F GK+ E I L K+M G++P +FS
Sbjct: 354 YLRNVMEANMNPDVKSYEVVINGFCKIGKSD-------EAIS-LLKEMRARGLKPTVFSF 405
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC-AQGRTKNARELCDEM 316
N++ + + + ++ A+ + QM + + LPN SY+ +I GLC A+GR ++ +L D M
Sbjct: 406 NAVFRILVENGELDRAILLLKQMPQM-DCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 464
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
R G Y+ L+ G VE ++ EM+ K+ + ++ ++ ++C +G+
Sbjct: 465 IRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKGKV 524
Query: 377 GEAMKLLKELQNKNLIDGYTYTKLLD 402
EA KL +D +Y ++LD
Sbjct: 525 TEAEKLFDTCSRCPAVDVDSYRRVLD 550
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 109/217 (50%), Gaps = 16/217 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T+I + + + A VF M +P++ +YN + F +G M
Sbjct: 197 YTTMIRGYCKMGMIENAKKVFDVMT------VKPNLLAYNTMINGFCKKGD--------M 242
Query: 236 ETIRCLFKQMVN-DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
E+ R +F +M++ + P+ + ++I GY + +A + ++M + PN +Y+
Sbjct: 243 ESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEM-MNRGCRPNELTYN 301
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I+GLC GR A+ L +M+ GF + ++ S++ L + G+ ++ V L ++E
Sbjct: 302 AMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEA 361
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D +Y V++ C+ G++ EA+ LLKE++ + L
Sbjct: 362 NMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGL 398
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 126/300 (42%), Gaps = 49/300 (16%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
E F+ K+ D STY M R M + V + M P+ YNT+I
Sbjct: 179 EFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLA----YNTMIN 234
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
F + + A VF M + +C P+ +Y L + +G+ +E +
Sbjct: 235 GFCKKGDMESARLVFDRMMSGE--DCLPNHVTYTTLIDGYCKKGE--------LEEAKKC 284
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------------------- 280
+M+N G P+ + N+MI G ++ V++A + +M
Sbjct: 285 MNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCV 344
Query: 281 --------GVVYNYL-----PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
G + N + P+ SY+ +I+G C G++ A L EM+ +G P+ S
Sbjct: 345 VGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFS 404
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC-RRGRAGEAMKLLKEL 386
+N++ L NGE++ + L +M + +F++Y T++ +C +GR + L+ +
Sbjct: 405 FNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRM 464
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 130/284 (45%), Gaps = 26/284 (9%)
Query: 110 VMTLQEDPLVCLELFNWASK---QP-RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA 165
V+ Q +P L FNWAS P ++ H Y +T L + + + +L
Sbjct: 61 VIYEQTNPYHALFFFNWASNPNPNPNKYHHTTPCYTAITDVL----LSHSLISIAASLLK 116
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
+ ++ + +I + + + A++ F K N C + SYN L +
Sbjct: 117 NSNKL-SDFFISKLIKAYGDRGNVKAAIFWFHQAKQIENGAC---LYSYNSLLGVLVR-- 170
Query: 226 KNTYINHVYMETIRCLFKQMVNDGI-EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
+N + + F Q+V + + PD+ + +MI+GY + +A ++F M V
Sbjct: 171 ----VNSIKLAEE--FFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVK- 223
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDE-MKRKGFVPSSKSYNSLVSALALNGEVEE 343
PN +Y+ +I+G C +G ++AR + D M + +P+ +Y +L+ GE+EE
Sbjct: 224 ---PNLLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEE 280
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
K + EM+ + + +TY ++ +C GR EA L+ +++
Sbjct: 281 AKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMR 324
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 16/270 (5%)
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVYV 195
A TY + L A M +E V M A C + +Y T+++ A + A +
Sbjct: 142 AFTYTALLHGLCGAGMVREAMSVFAGMQA--DGCAPDPHVYATMVHGLCGAGRTREAETL 199
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ ++ P++ YN L + + G +E +F++M +G P++
Sbjct: 200 ---LSDAMAEGFEPNVVVYNALIDGYCNVGD--------LELAVDVFERMDVNGCSPNVR 248
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +I G+ S ++ A+ +F +M V +PN +Y LI G C+ G+ A L
Sbjct: 249 TYTELISGFCKSRKLDRAMMLFSRM-VDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQS 307
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M+ G VP+ + + L+ AL + V E L +I+K V+ I Y +++D +C+ GR
Sbjct: 308 MENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGR 367
Query: 376 AGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
A +L++ L ++ + D +TY+ L+D L
Sbjct: 368 FAAADRLMQTLVSQGFVPDAHTYSSLIDGL 397
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 47/298 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D Y M L A +E + +++ +A F +YN +I + L AV V
Sbjct: 176 DPHVYATMVHGLCGAGRTREAETLLSDAMAE-GFEPNVVVYNALIDGYCNVGDLELAVDV 234
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ M + C P++R+Y L + F K+ ++ M LF +MV+ G+ P++
Sbjct: 235 FERMDVN---GCSPNVRTYTELISGFC---KSRKLDRAMM-----LFSRMVDAGLVPNVV 283
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLP------------------------ 288
+ ++I+G ++ A R+ M G+V N
Sbjct: 284 TYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSL 343
Query: 289 -------NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
N Y LI GLC GR A L + +GFVP + +Y+SL+ L E+
Sbjct: 344 IQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKEL 403
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYT 398
E + L +M+EK +TY ++DE+ R A + K+L ++ + D +TYT
Sbjct: 404 SEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYT 461
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 28/250 (11%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
D + Q L + F Y+++I ++LS A+ V M +PS +Y I+
Sbjct: 372 DRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEK---GVQPSPVTYTII 428
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+ + V + + + +M+ GI+PD+F+ ++ Y + DA +
Sbjct: 429 I--------DELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMM 480
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL-- 335
M V + PN +Y+ LI G G T A M G P+ +SY L+ L
Sbjct: 481 LHM-VDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIK 539
Query: 336 -ALNGEVEETVKNLW-------------EMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+ + ++W EM++ Q P + Y L +CR R EA
Sbjct: 540 KESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKI 599
Query: 382 LLKELQNKNL 391
LL E+Q+ NL
Sbjct: 600 LLIEMQSANL 609
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 17/268 (6%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--ATPSFCGTEALYNTIIYFFAEARKLS 190
+ D TY I R M+D + ML C YN +I +A S
Sbjct: 453 IKPDVFTYTIFVRSYCHEG---RMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTS 509
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR--GKNTYINHVY------METIRCLF 242
+A FK+M + C+P+ SY +L + + N N V M+ + L
Sbjct: 510 QAFSTFKHMVAN---GCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLL 566
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
++MV + +I N + + +++A + +M N P+ Y +I C
Sbjct: 567 EEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSA-NLTPSEDVYTSIIACCCR 625
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
A D M + G++P +SY ++S+L G ++ + +M+ K+ + I
Sbjct: 626 LKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIA 685
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKN 390
+R ++D + ++G E LL ++ KN
Sbjct: 686 WRILIDGLLQKGYVAECSSLLSVMEEKN 713
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 31/235 (13%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
Y +I F ++RKL RA+ +F M ++ + P++ +Y L S G+
Sbjct: 250 YTELISGFCKSRKLDRAMMLFSRMVDAGLV---PNVVTYTALIQGQCSDGQLDCAYRLLQ 306
Query: 227 ---------NTYINHVYMETI---------RCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
N + V ++ + + L ++ GI+ + S+I G +
Sbjct: 307 SMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAG 366
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
A R+ + V ++P++ +Y LI GLC Q A + D+M KG PS +Y
Sbjct: 367 RFAAADRLMQTL-VSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTY 425
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
++ L + + K L +MI D TY + C GR +A ++
Sbjct: 426 TIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMM 480
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 2/161 (1%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
++ G PD + S + GY + + A R+F M + + +F+Y L+HGLC
Sbjct: 95 LSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPL-RGCVRTAFTYTALLHGLC 153
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G + A + M+ G P Y ++V L G E L + + + + +
Sbjct: 154 GAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVV 213
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGYTYTKLL 401
Y ++D C G A+ + + + N + TYT+L+
Sbjct: 214 VYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELI 254
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 131/268 (48%), Gaps = 21/268 (7%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSF-CGTEAL-YNTIIYFFAEARKLSRAVYVF 196
T++I+ R L ++ ++ N M SF C + + YNT+I +A +L RA +
Sbjct: 200 TFNILIRGLCRVGEVEKGFELFNAM---QSFGCLPDVVTYNTLISGLCKANELDRACDLL 256
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
K ++ SRN +C P + +Y + + F GK +E LF++M+ GIEP + +
Sbjct: 257 KEVQ-SRN-DCSPDVMTYTSIISGFRKLGK--------LEAASVLFEEMIRSGIEPTVVT 306
Query: 257 LNSMIKGY-ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
N +I G+ + N V A H+ Y+ +P+ ++ LI G C G + ++ D
Sbjct: 307 FNVLIDGFGKIGNMV--AAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDV 364
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM-IEKQRPVDFITYRTVLDEICRRG 374
MK + P+ +Y+ +++AL + + E L ++ P FI Y V+D C+ G
Sbjct: 365 MKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFI-YNPVIDGFCKAG 423
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLL 401
EA ++ E++ K D T+T L+
Sbjct: 424 NVDEANVIVTEMEEKRCRPDKVTFTILI 451
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 132/324 (40%), Gaps = 34/324 (10%)
Query: 113 LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT 172
L +P V L+ + H STY ++ R L ++ ++ V+ M + +
Sbjct: 69 LNNNPQVGLKFMEFCRLNFSLIHCFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDS 128
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------ 226
L ++ FA+A K A K + + E R S YN L + GK
Sbjct: 129 RVL-GFLVTSFAQAGKFDLAK---KLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIF 184
Query: 227 ------------NTYINHVYMETIRC----------LFKQMVNDGIEPDIFSLNSMIKGY 264
NT+ ++ + + C LF M + G PD+ + N++I G
Sbjct: 185 LFKENLAFHSPPNTWTFNILIRGL-CRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGL 243
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
+N ++ A + ++ + P+ +Y +I G G+ + A L +EM R G P+
Sbjct: 244 CKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPT 303
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
++N L+ G + +M D +T+ +++D CR G +K+
Sbjct: 304 VVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWD 363
Query: 385 ELQNKNLIDG-YTYTKLLDVLEDD 407
++ +N+ YTY+ +++ L D
Sbjct: 364 VMKARNVSPNIYTYSVIINALCKD 387
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 132/266 (49%), Gaps = 16/266 (6%)
Query: 127 ASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA 186
A ++ +FR S Y ++ + A+ + +++ QM G L+ T++ A
Sbjct: 172 AMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGV-PLFTTLVRALARE 230
Query: 187 RKLSRAVYVFKYMKNSRNLEC-RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
++ A+ + +K S C P I YN+ F GK ++ + F ++
Sbjct: 231 GRVEGALALVDEVKGS----CLEPDIVLYNVCIDCF---GKAGNVDMAWK-----FFHEL 278
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
+ G++PD S SMI + +++A +F QM +P +++Y+ +I G + G+
Sbjct: 279 KSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMET-ERAVPCAYAYNTMIMGYGSAGQ 337
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
+NA +L D++K +G +PS S+NS+++ L +V+E + L+E ++K + TY
Sbjct: 338 FENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEAL-TLFEAMKKDAEPNSSTYNI 396
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL 391
++D +C G+ EA + E+++ L
Sbjct: 397 IIDMLCMAGKVEEAYMIRDEMEHAGL 422
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 20/268 (7%)
Query: 139 TYHIMTRKLGAAKMYQ---EMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
T +IM +L AK ++ EM + +Q P+ Y ++I + + A +
Sbjct: 428 TVNIMVDRLCKAKKFEPAYEMFETASQRGCNPN----SVTYCSLIDGLGKKGNVDDAYRL 483
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ M ++ + P + Y L F G+ E +FK+M G +PD+
Sbjct: 484 FENMLDTGH-NANPVV--YTSLIRNFFMHGRK--------EDGHKIFKEMNRRGCQPDLT 532
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
LN+ + + V IF + Y +LP+ SY LIHGL G+ + +
Sbjct: 533 LLNTYMDCVFKAGDVEKGRAIFEDIKG-YGFLPDVRSYSILIHGLTKAGQARETSSIFHA 591
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
MK++GF +++YN++V +G++++ + L EM K+ P TY +++D + + R
Sbjct: 592 MKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDR 651
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLD 402
EA L +E ++K + ++ Y+ L+D
Sbjct: 652 LDEAYMLFEEAKSKGIELNVIVYSSLID 679
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 137/303 (45%), Gaps = 25/303 (8%)
Query: 127 ASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA 186
A KQ F DA Y+ + + + +V+ +M T A Y +II A+
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEM-KVKRVPPTVATYGSIIDGLAKI 649
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMV 246
+L A +F+ K S+ +E ++ Y+ L F GK I+ Y+ + ++M+
Sbjct: 650 DRLDEAYMLFEEAK-SKGIEL--NVIVYSSLIDGF---GKVGRIDEAYL-----ILEEMM 698
Query: 247 NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT 306
G+ P++++ NS++ + + +N+AL F M + PN+++Y LI+GLC +
Sbjct: 699 KKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEM-KCSPNTYTYSILINGLCRVQKY 757
Query: 307 KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
A EM+++G VP+ +Y ++++ LA G + + D ++ +
Sbjct: 758 NKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNAL 817
Query: 367 LDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED----------DFG-NSIRH 414
++ + RA EA + +E + K I+ LLD L FG N++RH
Sbjct: 818 IEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVVGFGENTVRH 877
Query: 415 HLR 417
+
Sbjct: 878 FFQ 880
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 6/183 (3%)
Query: 227 NTYINHVY----METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV 282
NTY++ V+ +E R +F+ + G PD+ S + +I G + + IFH M
Sbjct: 535 NTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQ 594
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+ ++ +Y+ ++ G C G+ A E+ +EMK K P+ +Y S++ LA ++
Sbjct: 595 -QGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLD 653
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
E E K ++ I Y +++D + GR EA +L+E+ K L YT+ L+
Sbjct: 654 EAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 713
Query: 402 DVL 404
D L
Sbjct: 714 DAL 716
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 16/238 (6%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
P+F + Y +I AEAR+ RA+ + + M+ + + + L A G+
Sbjct: 180 PAF----SAYTVLIGAMAEARQPERALELLRQMQE---VGYEVGVPLFTTLVRALAREGR 232
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
+E L ++ +EPDI N I + + +V+ A + FH++
Sbjct: 233 --------VEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKS-QGL 283
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
P+ SY +I LC GR A EL +M+ + VP + +YN+++ G+ E K
Sbjct: 284 KPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYK 343
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVL 404
L ++ E+ +++ ++L + ++ + EA+ L + ++ + TY ++D+L
Sbjct: 344 LLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDML 401
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 116/284 (40%), Gaps = 26/284 (9%)
Query: 119 VCLELFNWAS------------KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
VC++ F A K + D +Y M L A E +++ QM T
Sbjct: 257 VCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQM-ET 315
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
YNT+I + A + A +K + + C PS+ S+N + T GK
Sbjct: 316 ERAVPCAYAYNTMIMGYGSAGQFENA---YKLLDQLKERGCIPSVVSFNSILTCL---GK 369
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
++ LF+ M D EP+ + N +I ++ V +A I +M
Sbjct: 370 KRKVDEAL-----TLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHA-GL 422
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
PN + + ++ LC + + A E+ + ++G P+S +Y SL+ L G V++ +
Sbjct: 423 FPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYR 482
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
M++ + + Y +++ GR + K+ KE+ +
Sbjct: 483 LFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRG 526
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 19/230 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I+ +A + +F MK R+YN + F GK ++ Y
Sbjct: 569 YSILIHGLTKAGQARETSSIFHAMKQQG---FALDARAYNAVVDGFCKSGK---LDKAYE 622
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ ++M + P + + S+I G + +++A +F + G+ N +
Sbjct: 623 -----VLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVI----V 673
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI G GR A + +EM +KG P+ ++NSL+ AL E+ E + M
Sbjct: 674 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMK 733
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
E + + TY +++ +CR + +A +E+Q + L+ TYT ++
Sbjct: 734 EMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMI 783
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 10/260 (3%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FR DA T+ + + L A K + D+V + + YN ++ + + A
Sbjct: 123 FRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEA 182
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M + R P + SYN + F G + Y E M++ GI P
Sbjct: 183 LELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHE--------MLDRGILP 234
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
D+ + +S+I + ++ A+ + + M V +P+ +Y+ ++HG C+ G+ K A
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTM-VKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+M+ G P+ +Y+SL++ L NG E K M ++ D TYRT+L
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353
Query: 373 RGRAGEAMKLLKELQNKNLI 392
+G E M L +L +N I
Sbjct: 354 KGALVE-MHALLDLMVRNGI 372
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 120/265 (45%), Gaps = 14/265 (5%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
++F+ +K+ D +TY + + EM +++ M+ ++N +I
Sbjct: 327 KIFDSMTKRG-LEPDIATYRTLLQGYATKGALVEMHALLDLMVRN-GIQPDHHVFNILIC 384
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+A+ K+ +A+ VF M R P++ Y + G ++
Sbjct: 385 AYAKQEKVDQAMLVFSKM---RQHGLNPNVVCYGTVIDVLCKSGS--------VDDAMLY 433
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F+QM+++G+ P+I S+I G + + A + +M + N+ ++ +I C
Sbjct: 434 FEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM-LDRGICLNTIFFNSIIDSHC 492
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
+GR + +L D M R G P +YN+L+ L G+++E K L M+ D +
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552
Query: 362 TYRTVLDEICRRGRAGEAMKLLKEL 386
TY T+++ CR R +A+ L KE+
Sbjct: 553 TYGTLINGYCRVSRMDDALALFKEM 577
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND---GIEPDIFSLNSMI 261
L C P + SYN L ++ E + L M +D G PD+ S N+++
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRS-------QEALE-LLHMMADDRGGGSPPDVVSYNTVL 208
Query: 262 KGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
G+ + A +H+M + LP+ +Y +I LC A E+ + M + G
Sbjct: 209 NGFFKEGDSDKAYSTYHEM-LDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P +YNS++ +G+ +E + L +M + +TY ++++ +C+ GR+ EA K
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327
Query: 382 LLKELQNKNL-IDGYTYTKLL 401
+ + + L D TY LL
Sbjct: 328 IFDSMTKRGLEPDIATYRTLL 348
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 102/225 (45%), Gaps = 14/225 (6%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
A+ + S A V +Y + +R + P++ +Y IL G+ ++
Sbjct: 62 LADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGR--------LDLGFA 113
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+V G D + ++KG +DA+ I + +P+ FSY+ L+ GL
Sbjct: 114 ALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGL 173
Query: 301 CAQGRTKNARELCDEM---KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
C + R++ A EL M + G P SYN++++ G+ ++ EM+++
Sbjct: 174 CDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGIL 233
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
D +TY +++ +C+ +AM++L + +N + D TY +L
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 278
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 113/261 (43%), Gaps = 14/261 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
Y + L + + ++++ +ML C +N+II + ++ + +F
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEML-DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 506
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + +P I +YN L GK M+ L MV+ G++PDI +
Sbjct: 507 MVR---IGVKPDIITYNTLIDGCCLAGK--------MDEATKLLASMVSVGVKPDIVTYG 555
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I GY + ++DAL +F +M V PN +Y+ ++ GL RT A+EL + +
Sbjct: 556 TLINGYCRVSRMDDALALFKEM-VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITK 614
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G +YN ++ L N +E ++ + ++ T+ ++ + + GR E
Sbjct: 615 SGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDE 674
Query: 379 AMKLLKELQNKNLI-DGYTYT 398
A L L+ D TY+
Sbjct: 675 AKDLFAAHSANGLVPDVRTYS 695
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 118/258 (45%), Gaps = 17/258 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF--CGTEALYNTIIYFFAEARKLSRAV 193
D TY + L A+ + +V+N M+ C T YN+I++ + + + A+
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT---YNSILHGYCSSGQPKEAI 291
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
K M+ S +E P++ +Y+ L G++T R +F M G+EPD
Sbjct: 292 GTLKKMR-SDGVE--PNVVTYSSLMNYLCKNGRST--------EARKIFDSMTKRGLEPD 340
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
I + ++++GY + + + M V P+ ++ LI Q + A +
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLDLM-VRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 399
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+M++ G P+ Y +++ L +G V++ + +MI++ + I Y +++ +C
Sbjct: 400 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTC 459
Query: 374 GRAGEAMKLLKELQNKNL 391
+ +A +L+ E+ ++ +
Sbjct: 460 DKWDKAEELILEMLDRGI 477
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 101/234 (43%), Gaps = 18/234 (7%)
Query: 158 DVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
D ++LA+ G + Y T+I + ++ A+ +FK M +S P+I +Y
Sbjct: 533 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSS---GVSPNIITY 589
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
NI+ + +Y+ + G + ++ + N ++ G +N ++AL
Sbjct: 590 NIILQGLFHTRRTAAAKELYV--------SITKSGTQLELSTYNIILHGLCKNNLTDEAL 641
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R+F + + L + +++ +I L GR A++L G VP ++Y+ +
Sbjct: 642 RMFQNLCLTDLQL-ETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG---RAGEAMKLLKE 385
L G +EE M E D +++ ++ +RG RAG + ++ E
Sbjct: 701 LIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDE 754
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y ++I+ +A KL +A ++ + R+ P + +N + G+
Sbjct: 30 EFTYGSLIHGLCKAGKLDQA---YELLDEMRDRGIPPGVAVHNGVIKGLCKAGR------ 80
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ + + FK + PDI + N ++ + S V +A +IF M LPN +
Sbjct: 81 -FGDALG-YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVT 138
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y +I+GLC G+ A EL D M G P+ +Y+ LV L G ++ L EM
Sbjct: 139 YTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ D I Y T+L+ +C+ R EA++L++
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQ 230
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 33/264 (12%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------- 226
A++N +I +A + A+ FK + ++ C P I ++NIL A + G+
Sbjct: 66 AVHNGVIKGLCKAGRFGDALGYFKTVAGTK---CTPDIITFNILVDALVKSGRVEEAFQI 122
Query: 227 -----------------NTYINHV----YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
T IN + ++ L M G P++ + + +++G
Sbjct: 123 FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLC 182
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ + + +M + P+ Y+ L++GLC R A EL M R G P+
Sbjct: 183 KAGRTDKGFTLLQEM-TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTV 241
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+YNSL+ + +V+ + + M E+ P D I Y TV+ +CR R +A LLK+
Sbjct: 242 VTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301
Query: 386 LQNKNLI-DGYTYTKLLDVLEDDF 408
+ + D TY+ ++D L D+
Sbjct: 302 MVAARCVPDVITYSTIIDGLCKDW 325
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D T++I+ L + +E + M + Y T+I + KL RA+ +
Sbjct: 99 DIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIEL 158
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M + C P++ +Y++L G+ + L ++M G +PD+
Sbjct: 159 LDLMNET---GCCPNVITYSVLVEGLCKAGRT--------DKGFTLLQEMTRRGFQPDVI 207
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
N+++ G S +++AL + M + P +Y+ L+ C + A L
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLM-IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +G P +YN++++ L + +++ L +M+ + D ITY T++D +C+ R
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 376 AGEAMKL 382
KL
Sbjct: 327 VDADWKL 333
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 128/314 (40%), Gaps = 62/314 (19%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F+ D Y+ + L ++ E ++V M+ + + T YN+++ F ++++ RA
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY-PTVVTYNSLMELFCRSKQVDRA 260
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M C P + +YN + + ++ + L KQMV P
Sbjct: 261 FRLIQVMSER---GCPPDVINYNTVIAGLCRDAR--------LDDAQALLKQMVAARCVP 309
Query: 253 DIFSLNSMIKGYILSNHVN---------DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
D+ + +++I G V+ + L + Q G PN+ +Y +I GLC
Sbjct: 310 DVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP----PNAGTYAVVIEGLCRA 365
Query: 304 GRTKNARELCDEMKRKGFVPSSKS-----------------------------------Y 328
+++ A L M VP S Y
Sbjct: 366 RKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAY 425
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ L+ GEV++ V+ M+E RP TY +VLD +C GR EA+++++ + +
Sbjct: 426 AALIDGLSKGGEVDKAVRVFELMVESFRP-GVATYNSVLDGLCGVGRIEEAVRMVEGMIH 484
Query: 389 KNLI-DGYTYTKLL 401
K DG +Y L+
Sbjct: 485 KECFPDGASYGALI 498
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Query: 165 ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR 224
P GT Y +I ARK +A+ + + M +S E P + S++++ +
Sbjct: 347 GCPPNAGT---YAVVIEGLCRARKSQQALALLRRMIDS---EVVPDLSSFSMVIGSLC-- 398
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
K+ ++ Y +F M +P+ + ++I G V+ A+R+F M V
Sbjct: 399 -KSHDLDAAYK-----IFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM--VE 450
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
++ P +Y+ ++ GLC GR + A + + M K P SY +L+ L VEE
Sbjct: 451 SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEA 510
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ + K ++ Y +++E+C++ R +A + +L
Sbjct: 511 YELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKL 552
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+PN F+Y LIHGLC G+ A EL DEM+ +G P +N ++ L G + +
Sbjct: 27 VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALG 86
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN--LIDGYTYTKLLDVL 404
+ + D IT+ ++D + + GR EA ++ + + + L + TYT +++ L
Sbjct: 87 YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146
Query: 405 EDD 407
D
Sbjct: 147 CKD 149
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL A + + MK + C P+ +Y ++ L R + + + L ++M++
Sbjct: 332 KLEAACEILEMMKQT---GCPPNAGTYAVVIEG-LCRARKS-------QQALALLRRMID 380
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+ PD+ S + +I S+ ++ A +IF M PN +Y LI GL G
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE-RECKPNPVAYAALIDGLSKGGEVD 439
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A + E+ + F P +YNS++ L G +EE V+ + MI K+ D +Y ++
Sbjct: 440 KAVRV-FELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498
Query: 368 DEICRRGRAGEAMKLLKELQNKNL 391
+CR EA +L + ++ K
Sbjct: 499 RGLCRVSCVEEAYELFQAVEAKGF 522
>gi|359495078|ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Vitis vinifera]
Length = 1294
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 125/281 (44%), Gaps = 19/281 (6%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV---VNQM 163
+ V+ +Q DP++C + F+WA KQ ++H+ ++Y+ L + ++ D V +N
Sbjct: 661 VAEVLKVQTDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQ 720
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
PS E + +I +A + R YV++ MK +P + YN + +
Sbjct: 721 GKPPS----EKQFEILIRMHIDANRGLRVYYVYEKMKK---FGIKPRVFLYNRIMDGLVK 773
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
G +++ +++ DG+ + + ++KG + +++ L ++ +M
Sbjct: 774 TG--------HLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLEVWEEM-RK 824
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
P+ +Y L+ LC R EL EMK+K ++ Y SL+ +N V
Sbjct: 825 DKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGS 884
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
L ++++ D Y ++++ +C + +A KL +
Sbjct: 885 ACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKLFQ 925
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 270 VNDALRIFH--QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
N LR+++ + + P F Y+ ++ GL G A + ++ K G V S +
Sbjct: 739 ANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVT 798
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
Y LV L G ++E ++ +WE + K + D + Y T++ +C R GE +L KE+
Sbjct: 799 YMILVKGLCKAGRIDEVLE-VWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEM 857
Query: 387 -QNKNLIDGYTYTKLLD 402
Q K LID Y L++
Sbjct: 858 KQKKYLIDRAIYGSLIE 874
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 96/227 (42%), Gaps = 14/227 (6%)
Query: 160 VNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
V + L +C ++YN ++ ++ +A+ +F +K+S +P +Y+
Sbjct: 993 VFEHLKAKGYCSI-SIYNILMEAIHRTGEVKKALSLFDDIKDSN---FKPDSSTYSNAII 1048
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
F+ G E C + +++ P + + S++KG S ++ A+ +
Sbjct: 1049 CFVEVGD-------VQEACAC-YNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRD 1100
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
P F Y I C G + ++ +EM ++G P +Y++L+S + +G
Sbjct: 1101 CLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKHG 1160
Query: 340 EVEETVKNLWEMIEKQ--RPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+EE K M E++ + I Y +L E ++ A + LK
Sbjct: 1161 TLEEARKVFSNMRERKLLTEANVIVYDEILIEHMKKKTADLVLSGLK 1207
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 96/245 (39%), Gaps = 44/245 (17%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A+Y ++I F ++ A + K + +S R + YN L + + ++
Sbjct: 867 AIYGSLIEGFVVNERVGSACDLLKDLMDSG---YRADLAIYNSLIEGMCNVKQ---VDKA 920
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG----VVYNYLPN 289
Y LF+ V++ +EP+ ++ M+ Y ++D + QM V + L
Sbjct: 921 YK-----LFQVTVHESLEPNFLTVKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDDLSK 975
Query: 290 SFS-----------------------------YDYLIHGLCAQGRTKNARELCDEMKRKG 320
FS Y+ L+ + G K A L D++K
Sbjct: 976 FFSVMIEKGERLKLALEVFEHLKAKGYCSISIYNILMEAIHRTGEVKKALSLFDDIKDSN 1035
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
F P S +Y++ + G+V+E ++IE + YR+++ +C+ A+
Sbjct: 1036 FKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAI 1095
Query: 381 KLLKE 385
L+++
Sbjct: 1096 MLVRD 1100
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
+ C+P+ SY+I+ G+ + R LFK+M G+ PD+ S S+I G
Sbjct: 632 GINCKPNAISYSIIIDGLCKCGRE--------DEARELFKEMKALGVIPDVISYTSLIHG 683
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ S DA +F++M V P+ ++ LI LC +G+ A EL + M ++G +P
Sbjct: 684 FCRSGKWKDAKYLFNEM-VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 742
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
++ +Y +LV L +N + E + +M + D +TY T++ +C+ G A++L
Sbjct: 743 NTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELH 802
Query: 384 KEL 386
K++
Sbjct: 803 KKM 805
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 40/264 (15%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY- 234
Y T+I+ F + K +A +F M ++ +P + + ++L +GK N +
Sbjct: 496 YTTLIHGFCLSGKWEKAKCLFNEM---LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLE 552
Query: 235 --------METIRC------------------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
++ + C LF +M G P++ + +++KG S
Sbjct: 553 VVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSG 612
Query: 269 HVNDALRIFHQM-------GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
++ AL + M G+ N PN+ SY +I GLC GR AREL EMK G
Sbjct: 613 NIKIALELHKNMLSDTSPYGI--NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 670
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P SY SL+ +G+ ++ EM++ D T+ ++D +C+ G+ EA +
Sbjct: 671 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANE 730
Query: 382 LLKELQNKNLI-DGYTYTKLLDVL 404
LL+ + + I + TYT L+ L
Sbjct: 731 LLEVMIQRGCIPNTVTYTTLVKGL 754
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++I+ F + K A Y+F M ++ +P + ++++L GK N +
Sbjct: 677 YTSLIHGFCRSGKWKDAKYLFNEM---VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLE 733
Query: 236 ETIR-----------------C----------LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
I+ C LF +M G PD+ + +++KG +
Sbjct: 734 VMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTG 793
Query: 269 HVNDALRIFHQM-------GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
++ AL + +M G N+ P+ SY +I GLC GR AREL EMK G
Sbjct: 794 NIKTALELHKKMLSDTGQYGT--NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGV 851
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
+P+ SY SL+ +G++E+ EM+++ ++ +TY ++ C+ G+ +A+
Sbjct: 852 IPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 41/268 (15%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRN---LEC-RPSIRSYNILFTAFLSRGK----- 226
Y T++ + K++ A+++ + M N + ++C RP + + ++L GK
Sbjct: 308 YGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEAN 367
Query: 227 ------------------NTYINHVYME----TIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
+T I + ME LF M G PD + +++KG
Sbjct: 368 ELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGL 427
Query: 265 ILSNHVNDALRIFHQM-------GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
+ ++N AL++ +M G+ P SY +I GLC R AREL +EMK
Sbjct: 428 CQTGNINIALQLHQEMLNDTGRYGIKCK--PTLISYSIIIDGLCKDRREDEARELFEEMK 485
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
+G +P SY +L+ L+G+ E+ EM++ D T ++D +C++G+
Sbjct: 486 AQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVI 545
Query: 378 EAMKLLK-ELQNKNLIDGYTYTKLLDVL 404
EA KLL+ +Q ++D T T L+ L
Sbjct: 546 EANKLLEVVIQRGCILDVVTCTTLVKGL 573
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 27/237 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ II + + A +FK MK L P + SY L F GK
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKA---LGVIPDVISYTSLIHGFCRSGK--------W 690
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV---NDALRIFHQMGVVYNYLPNSFS 292
+ + LF +MV+ G++PD+ + + +I V N+ L + Q G + PN+ +
Sbjct: 691 KDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI----PNTVT 746
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y L+ GLC R A +L +M++ G +P +Y +L+ L G ++ ++ +M+
Sbjct: 747 YTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 806
Query: 353 EKQ-------RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+P D I+Y ++D +C+ GR EA +L KE++ +I + +YT L+
Sbjct: 807 SDTGQYGTNFKP-DVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLI 862
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I ++S A ++F M + L CRP +Y L G IN
Sbjct: 92 YSTLIKGLCMEHRISEATWLFMSM---QKLGCRPDAITYGTLMKGLCQTGN---INIALQ 145
Query: 236 ETIRCLFKQMVND----GIE--PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
L ++M+ND GI+ P + S + +I G ++A +F +M +P+
Sbjct: 146 -----LHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKA-QGMMPD 199
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
SY LIHG C G+ + A+ L +EM G P + L+ G+V E + L
Sbjct: 200 VISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLE 259
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
M+ + +D +TY T++ +C + R EA +L ++
Sbjct: 260 VMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMK 297
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I ++S A ++F M + L CRP +Y L G IN
Sbjct: 385 YSTLIKGLCMEHRISEATWLFMSM---QKLGCRPDAITYGTLMKGLCQTGN---INIALQ 438
Query: 236 ETIRCLFKQMVND----GIE--PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
L ++M+ND GI+ P + S + +I G ++A +F +M +P+
Sbjct: 439 -----LHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKA-QGIMPD 492
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
SY LIHG C G+ + A+ L +EM G P + + L+ L G+V E K L
Sbjct: 493 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLE 552
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+I++ +D +T T++ +C + R +A +L ++Q
Sbjct: 553 VVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQ 590
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 10/172 (5%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-------GVVYNYLPNSFSY 293
LF M G PD + +++KG + ++N AL++ +M G+ P SY
Sbjct: 111 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCK--PTLISY 168
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+I GLC R AREL EMK +G +P SY SL+ +G+ E+ EM++
Sbjct: 169 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLD 228
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
D T ++D C+ G+ EA +LL+ + ++ ++D TY+ L+ L
Sbjct: 229 VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGL 280
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 19/235 (8%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
T++ ++S+A +F M + L C P++ + L G + +E
Sbjct: 567 TTLVKGLCMKHRISKATQLFLKM---QKLGCMPNVVTCATLMKGLCQSGNI----KIALE 619
Query: 237 TIRCLFKQMVND----GI--EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
L K M++D GI +P+ S + +I G ++A +F +M + +P+
Sbjct: 620 ----LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKAL-GVIPDV 674
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
SY LIHG C G+ K+A+ L +EM G P +++ L+ L G+V E + L
Sbjct: 675 ISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 734
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLDVL 404
MI++ + +TY T++ +C R EA +L ++Q L D TY L+ L
Sbjct: 735 MIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 789
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRN---LECRPSIRSYNILFTAFLSRGKNTYINH 232
Y T++ + ++ A+ + + M N ++C+P++ SY+I+ +
Sbjct: 127 YGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRE----- 181
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ R LFK+M G+ PD+ S S+I G+ S A +F++M + P+ +
Sbjct: 182 ---DEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEM-LDVGIQPDVTT 237
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
LI C +G+ A EL + M +G + +Y++L+ L + + E + M
Sbjct: 238 SGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMK 297
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+ D I Y T++ +C+ G+ A+ L +E+ N
Sbjct: 298 KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLN 333
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFSYDYLIHGL 300
G+ PD F+ N +I VN+ L + V Y+ P+ + LI L
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ----R 356
C +G+ A EL + M ++G + +Y++L+ L + + E W + Q R
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT---WLFMSMQKLGCR 121
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
P D ITY T++ +C+ G A++L +E+ N
Sbjct: 122 P-DAITYGTLMKGLCQTGNINIALQLHQEMLN 152
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F KL A+ +F M S+N+ P + +++IL F G +
Sbjct: 371 YNALISGFCIVGKLKDAIDLFNKM-TSKNI--IPDVYTFSILVDGFCKDGN--------I 419
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV-----YNYL 287
+ + + M+ I+PD+ + +S++ GY L N VN A IF+ M GV YN +
Sbjct: 420 KEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIM 479
Query: 288 PNSF--------------------------SYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
N F +Y LI GLC GR A EL DEM +G
Sbjct: 480 INGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQ 539
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P +YNS++ AL V++ + L ++ + D TY ++ +C+ G+ +A K
Sbjct: 540 QPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARK 599
Query: 382 LLKELQNKNL-IDGYTYTKLL 401
+ ++L K +D Y YT ++
Sbjct: 600 VFEDLLVKGYNLDVYAYTVMI 620
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P + YN + K+ ++N + L+ + V+ I PD+F+ N++I G+ +
Sbjct: 330 QPDVVMYNTIIDGMC---KDKHVNDAFD-----LYSEKVSKRIFPDVFTYNALISGFCIV 381
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ DA+ +F++M N +P+ +++ L+ G C G K A+ + M ++ P +
Sbjct: 382 GKLKDAIDLFNKM-TSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y+SL+ L EV + M + + +Y +++ C+ EAMKL KE+
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500
Query: 388 NKNLI-DGYTYTKLLDVL 404
+K + D TY+ L+D L
Sbjct: 501 HKQIFPDVITYSSLIDGL 518
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
+++ +G EPD +L + IKG+ L ++ AL FH + + + SY LI+GLC
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALH-FHDKVIAMGFHLDQVSYGTLINGLCKV 311
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G TK A EL K P YN+++ + + V + E + K+ D TY
Sbjct: 312 GETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTY 371
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
++ C G+ +A+ L ++ +KN+I D YT++ L+D
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVD 411
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 101/221 (45%), Gaps = 12/221 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + + + A+ +FK M + + P + +Y+ L G+ +Y
Sbjct: 476 YNIMINGFCKIKMVDEAMKLFKEMHHKQIF---PDVITYSSLIDGLCKSGRISYALE--- 529
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M G +PDI + NS++ +HV+ A+ + ++ P+ +Y
Sbjct: 530 -----LVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKG-QGIRPDMNTYTI 583
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ GLC G+ ++AR++ +++ KG+ +Y ++ G +E + L +M E
Sbjct: 584 LVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 643
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT 396
D TY ++ + + A KLL+E+ + L+ T
Sbjct: 644 CIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALT 684
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY+ + L + + + ++N+M P C + T+I+ + KL +A
Sbjct: 50 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLC----TFTTLIHGYCIEGKLDKA 105
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG--------------KNTYINHV----- 233
+ +F M N R RP I +YN L +G + + NHV
Sbjct: 106 LQLFDTMLNQR---LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 162
Query: 234 --------YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+E +M+N GI P+I + NS+IKGY S +V+ + +M +V
Sbjct: 163 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM-MVNK 221
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+ +Y+ LIHG + + +A +L + M+++ P +YN L++ +++G V+E
Sbjct: 222 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 281
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+M K D TY ++++ G + EA +L E+ +
Sbjct: 282 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGF 327
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 98/183 (53%), Gaps = 15/183 (8%)
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
Y+ +RC G+ PD +I G+ + ++DALR+ +M V LP+ +Y
Sbjct: 3 YLREMRCF-------GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM-VGCGCLPDVVTY 54
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L++GLC + R +A L +EM+ +G P ++ +L+ + G++++ ++ M+
Sbjct: 55 NTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN 114
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDV------LED 406
++ D +TY T++D +CR+G +A L ++ ++ + + TY+ L+D +ED
Sbjct: 115 QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVED 174
Query: 407 DFG 409
FG
Sbjct: 175 AFG 177
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + R+L A + M R P + ++ L + GK +
Sbjct: 54 YNTLLNGLCKERRLLDAEGLLNEM---RERGVPPDLCTFTTLIHGYCIEGK--------L 102
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF M+N + PDI + N++I G ++ A ++ M PN +Y
Sbjct: 103 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS-REIFPNHVTYSI 161
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI C +G+ ++A DEM KG +P+ +YNS++ +G V + K L +M+ +
Sbjct: 162 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 221
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY T++ + + +A KLL ++ + + D TY L++
Sbjct: 222 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLIN 269
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 135/313 (43%), Gaps = 30/313 (9%)
Query: 49 LKLSSNAILCSCYSAIALSRSSSRGVGK-RSKADSKPALDDTQFRCAVSELPPRFNNEEL 107
L++ + C C + + G+ K R D++ L++ + R +PP +L
Sbjct: 36 LRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER----GVPP-----DL 86
Query: 108 CNVMTLQEDPLV------CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVN 161
C TL + L+LF+ Q R R D TY+ + + + +D+ +
Sbjct: 87 CTFTTLIHGYCIEGKLDKALQLFDTMLNQ-RLRPDIVTYNTLIDGMCRQGDLDKANDLWD 145
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
M + F Y+ +I E ++ A F ++ N P+I +YN + +
Sbjct: 146 DMHSREIF-PNHVTYSILIDSHCEKGQVEDA---FGFLDEMINKGILPNIMTYNSIIKGY 201
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
R N +++ K MVN + PD+ + N++I GYI + ++DA ++ + M
Sbjct: 202 -CRSGNVSKGQKFLQ------KMMVNK-VSPDLITYNTLIHGYIKEDKMHDAFKLLNMM- 252
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
P+ +Y+ LI+G G + A + ++M KG P +Y S+++ G
Sbjct: 253 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 312
Query: 342 EETVKNLWEMIEK 354
+E + EM+++
Sbjct: 313 KEAFQLHDEMLQR 325
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 10/217 (4%)
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L R + + L PSI ++ L GK M+ + L+ M+
Sbjct: 110 LHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGK--------MDQVMMLYDDMLVR 161
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G++P++++ N +I S N+AL QM V +PN +Y LI G C +G+
Sbjct: 162 GLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKV-GCVPNVVNYSTLIDGYCLRGQMDE 220
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
AR + D M KG P+ +Y SL++ +EE V+ L E + K D +T+ T++
Sbjct: 221 ARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIIS 280
Query: 369 EICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
+CR GR A +L + + + + + TY LLD L
Sbjct: 281 GLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGL 317
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 113/258 (43%), Gaps = 49/258 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN II +++ K + A+ ++K + C P++ +Y+ L + RG+ M
Sbjct: 170 YNVIINSLSKSGKANEAL---GFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ--------M 218
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV--------- 283
+ R +F MV+ G P++++ S++ GY + +A+++ + G+V
Sbjct: 219 DEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTI 278
Query: 284 ----------------------YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+ + PN +Y L+ GLC G + A L EM+R
Sbjct: 279 ISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTV 338
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P+ Y L+ +L G++++ + +I++ + TY ++ +C+ G EA K
Sbjct: 339 KPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHK 398
Query: 382 LLKELQNKNLIDGYTYTK 399
L ++++ DG T K
Sbjct: 399 LFRKMEE----DGCTPDK 412
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P I ++ LF++ + G + ET+ L K++ GIE DI SL+ +I + +
Sbjct: 60 PCIVEFSKLFSSIVRMG--------HYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLH 111
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
V+ L + ++ + P+ ++ L++GLC +G+ L D+M +G P+ +Y
Sbjct: 112 RVDFGLSVLSKI-LKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTY 170
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N ++++L+ +G+ E + L +M + + + Y T++D C RG+ EA + + +
Sbjct: 171 NVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVS 230
Query: 389 KNLI-DGYTYTKLLD 402
K + YTYT L++
Sbjct: 231 KGCTPNVYTYTSLMN 245
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF+ + G P+I + ++ G ++ +A +F +M PN Y LI L
Sbjct: 294 LFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQR-STVKPNLVIYTILIDSL 352
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G+ K+ +EL + +G P+ +Y +LV AL G + E K +M E D
Sbjct: 353 CKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDK 412
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDF 408
Y ++ + A +L++E+ N+ G++ L +DF
Sbjct: 413 CAYNVIIQGFLQHKDPSMARQLVEEMVNR----GFSADAATRALLNDF 456
>gi|297804088|ref|XP_002869928.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315764|gb|EFH46187.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 731
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 15/287 (5%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLAT 166
+ V+ L D + F+WA KQ ++HD + Y+ L ++ D + +++ +
Sbjct: 132 VAEVLKLGNDATAAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQL-PELMDS 190
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
+E + +I A+ R+ R YV++ MK +P + YN + A + G
Sbjct: 191 QGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKK---FGFKPRVFLYNRIMDALVKNG- 246
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
Y + +++ DG+ + + ++KG + + + L I +M N
Sbjct: 247 -------YFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMR--ENL 297
Query: 287 L-PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+ F+Y +I L ++G + + DEMKR P +Y +LV L +G +E
Sbjct: 298 CKPDVFAYTAMIKTLVSEGNLDASLRVWDEMKRDEIKPDVMAYGTLVVGLCKDGRIERGY 357
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ EM KQ +D YR +++ G+ A L K+L + I
Sbjct: 358 ELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACDLWKDLVDSGYI 404
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 102/270 (37%), Gaps = 63/270 (23%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
Y T++ + ++ R +F MK + L R Y +L F++ GK
Sbjct: 340 YGTLVVGLCKDGRIERGYELFMEMKGKQILIDR---EIYRVLIEGFVADGKVRSACDLWK 396
Query: 227 ----NTYINH--VYMETIRCL------------FKQMVNDGIEPDIFSLNSMIKGYILSN 268
+ YI +Y I+ L F+ + + +EPD +L+ ++ Y++ N
Sbjct: 397 DLVDSGYIADLGIYNAVIKGLCSVNQVDKAYNLFQVAIEEELEPDFETLSPIMVAYVVMN 456
Query: 269 HVNDALRIFHQMG----VVYNYLPNSFS-----------------------------YDY 295
++D + ++G V +YL F Y+
Sbjct: 457 RLSDFSNLLERIGELGYPVTDYLTQFFKLLCADEEKRTMALDVFDILKTKGHGSVSVYNI 516
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ L G + + L EMK GF P S SY+ + G+V+E ++IE
Sbjct: 517 LMEVLYKMGDIQKSLSLFYEMKEFGFEPDSSSYSIALCCFVDKGDVQEACSCHEKIIEMS 576
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
R Y ++ +C+ G M L++E
Sbjct: 577 RVPSKAAYLSLTKGLCQIGEIDAVMLLVRE 606
>gi|255577348|ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530966|gb|EEF32823.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 678
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 13/270 (4%)
Query: 140 YHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKY 198
Y+I R L E+ +V+ ML T C + + NT++ F + ++ A+ +
Sbjct: 419 YNIYLRALCLTNSATELLNVLVSMLQTE--CQPDVITLNTVVNGFCKMHRIEEALTILTD 476
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + C P ++ + L+ G++ E + L+K M GI P + + N
Sbjct: 477 MTMGKF--CAPDAVTFTTIIAGLLNAGRS-------QEALNLLYKVMHEKGISPGVETYN 527
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I G +A+R F +M + +S +Y +I GLC G A++L D++
Sbjct: 528 AVIHGLFKLQLAEEAMRAFKRM-LAAGVAADSKTYTLIIDGLCESGLIDKAKKLWDDVIW 586
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+ Y S++ L G+++E L+E+++ + I+Y V+D C+ G E
Sbjct: 587 PSRIHDDFVYASILKGLCRAGKLDEACHFLYELVDSGVSPNIISYNIVIDSACKLGMKRE 646
Query: 379 AMKLLKELQNKNLIDGYTYTKLLDVLEDDF 408
A +++ E++ L ++LD L F
Sbjct: 647 AYQVVTEMRKNGLTPDAVTWRILDKLHATF 676
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 110/236 (46%), Gaps = 17/236 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+++II+ +A++ A + F S +C P R+ N+L L ++ H +
Sbjct: 96 FSSIIHALCDAKRFKEAHHRFLLCIAS---DCVPDERTCNVLIARLL----DSQYPHATL 148
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF V P + + N I + + A R+ M + + PN ++
Sbjct: 149 HVLYRLFH--VKPQFVPSLINYNRFIYQCCEFSQPDVAHRLLFDM-ISRGHCPNVVTFTS 205
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE---ETVKNLWEMI 352
L+ G C G NA +L DEM+ VP+S +Y+ L+ L G+ E E + NLWE +
Sbjct: 206 LLTGYCRVGEVGNAYKLFDEMRECSVVPNSLTYSVLIRGLLRQGDFEHGRELMCNLWETM 265
Query: 353 ---EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLLDVL 404
EK + V+ + V+D +CR G + K+ +++ Q K++ + Y ++D L
Sbjct: 266 KDEEKNQSVNAAAFVNVIDSLCREGFLNDVFKIAEDMPQGKSVNQEFAYAHMIDSL 321
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
M G+ P + S NS+I G A ++F + G+ + YLP+ ++Y L+ LC +
Sbjct: 337 MKKKGLTPSLVSYNSIIHGLCKERGCMRAYQLFEE-GIEFGYLPSEYTYKVLVEALCQEM 395
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
AR + + M K V ++ YN + AL L E + L M++ + D IT
Sbjct: 396 DLDKARRIVEAMLNKDGVDRTRIYNIYLRALCLTNSATELLNVLVSMLQTECQPDVITLN 455
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLL 401
TV++ C+ R EA+ +L ++ D T+T ++
Sbjct: 456 TVVNGFCKMHRIEEALTILTDMTMGKFCAPDAVTFTTII 494
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 99/241 (41%), Gaps = 13/241 (5%)
Query: 158 DVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
DV +++L + C + +++ + ++ A +F M R P+ +Y
Sbjct: 182 DVAHRLLFDMISRGHCPNVVTFTSLLTGYCRVGEVGNAYKLFDEM---RECSVVPNSLTY 238
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
++L L +G + + + + N + F ++I +ND
Sbjct: 239 SVLIRGLLRQGDFEHGRELMCNLWETMKDEEKNQSVNAAAFV--NVIDSLCREGFLNDVF 296
Query: 275 RIFHQM--GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
+I M G N F+Y ++I LC G+ A + MK+KG PS SYNS++
Sbjct: 297 KIAEDMPQGKSVN---QEFAYAHMIDSLCRAGKNHGASRIVYMMKKKGLTPSLVSYNSII 353
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
L + E IE TY+ +++ +C+ +A ++++ + NK+ +
Sbjct: 354 HGLCKERGCMRAYQLFEEGIEFGYLPSEYTYKVLVEALCQEMDLDKARRIVEAMLNKDGV 413
Query: 393 D 393
D
Sbjct: 414 D 414
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 119/255 (46%), Gaps = 32/255 (12%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK----NTYI 230
+YN +I + L +A ++ N + RP+ +Y+IL +F G+ +Y
Sbjct: 367 VYNALINSLCKGGDLDKAELLYS---NMSLMNLRPNGITYSILIDSFCRSGRLDVAISYF 423
Query: 231 NHVYMETI-------------RC----------LFKQMVNDGIEPDIFSLNSMIKGYILS 267
+ + + I +C LF +M N G+EP + S+I GY
Sbjct: 424 DRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKD 483
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
V A +++++M + PN +++ LI GLC+ + A EL DE+ + P+ +
Sbjct: 484 LQVQKAFKLYNKM-IDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVT 542
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
YN L+ +G++++ + L +M +K D TYR ++ +C GR +A + +L
Sbjct: 543 YNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLH 602
Query: 388 NKNL-IDGYTYTKLL 401
+N+ ++ Y+ LL
Sbjct: 603 KQNVKLNEMCYSALL 617
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I + LS A +F M N + FT+ +S Y + +
Sbjct: 438 YNSLINGQCKFGDLSAAESLFIEMTNK-------GVEPTATTFTSLIS----GYCKDLQV 486
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L+ +M+++GI P++++ ++I G +N + +A +F ++ V P +Y+
Sbjct: 487 QKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDEL-VERKIKPTEVTYNV 545
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C G+ A EL ++M +KG VP + +Y L+S L G V + + ++ ++
Sbjct: 546 LIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQN 605
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
++ + Y +L C+ GR EA+ E+ + + +D + L+D
Sbjct: 606 VKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLID 653
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 110/235 (46%), Gaps = 19/235 (8%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T + ++I + + ++ +A ++ M ++ P++ ++ L + S K
Sbjct: 469 TATTFTSLISGYCKDLQVQKAFKLYNKMIDN---GITPNVYTFTALISGLCSTNK----- 520
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF---HQMGVVYNYLP 288
M LF ++V I+P + N +I+GY ++ A + HQ G+V P
Sbjct: 521 ---MAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLV----P 573
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
++++Y LI GLC+ GR A++ D++ ++ + Y++L+ G + E +
Sbjct: 574 DTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSAS 633
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
EMI++ +D + + ++D ++ LLK++ ++ L D YT ++D
Sbjct: 634 CEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMID 688
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 149/388 (38%), Gaps = 90/388 (23%)
Query: 77 RSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHD 136
R K K A +D S L P + L N + +D + L FN+ H
Sbjct: 49 RGKQSWKVAFNDASIS---STLRPHHVEQVLMNTL---DDAKLALRFFNFLGLHKNMNHS 102
Query: 137 ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPS-----------------FCGTEALYNTI 179
++Y IM L ++++ + +++ +L S F T +N +
Sbjct: 103 TTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLG-FNLL 161
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
+ + + ++ AV + K M + L P +R+ + L L K T+
Sbjct: 162 VQNYVLSSRIFDAVVIVKLMFANNLL---PEVRTLSALLNGLLKVRK--------FITVW 210
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF-----SYD 294
LF + VN G+ PD ++ +++++ + D LR ++ + N F +Y+
Sbjct: 211 ELFDESVNAGVRPDPYTCSAVVRSMC---ELKDFLRAKEKIRWME---ANGFDLSIVTYN 264
Query: 295 YLIHGLCAQGRTKNARE-----------------------------------LCDEMKRK 319
LIHGLC R A E L DEM
Sbjct: 265 VLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVEL 324
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI----TYRTVLDEICRRGR 375
GF P+ + + LV L G++++ +E++ K F+ Y +++ +C+ G
Sbjct: 325 GFSPTEAAVSGLVDGLRKQGKIDDA----YELVVKVGRFGFVPNLFVYNALINSLCKGGD 380
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLD 402
+A L + NL +G TY+ L+D
Sbjct: 381 LDKAELLYSNMSLMNLRPNGITYSILID 408
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 10/196 (5%)
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F +K+ + RP N+++T+ + +TY + + MV + P++
Sbjct: 665 FDLLKDMHDQGLRPD----NVIYTSMI----DTYSKEGSFKKAFECWDLMVTEECFPNVV 716
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ +++ G + ++ A +F +M N PNS +Y + L +G K A L
Sbjct: 717 TYTALMNGLCKAGEMDRAGLLFKRMQAA-NVPPNSITYGCFLDNLTKEGNMKEAIGLHHA 775
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M KG + ++ ++N ++ G E K L EM E D +TY T++ E CR G
Sbjct: 776 M-LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGN 834
Query: 376 AGEAMKLLKELQNKNL 391
G ++KL + N+ L
Sbjct: 835 VGASVKLWDTMLNRGL 850
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 115/281 (40%), Gaps = 15/281 (5%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
ELF+ S R D T + R + K + + + M A F + YN +I+
Sbjct: 211 ELFD-ESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEAN-GFDLSIVTYNVLIH 268
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ ++S AV V + + + L + +Y L F + E L
Sbjct: 269 GLCKGDRVSEAVEVKRSL-GGKGLA--ADVVTYCTLVLGFCRLQQ--------FEAGIQL 317
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+MV G P +++ ++ G ++DA + ++G + ++PN F Y+ LI+ LC
Sbjct: 318 MDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGR-FGFVPNLFVYNALINSLC 376
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G A L M P+ +Y+ L+ + +G ++ + MI+
Sbjct: 377 KGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVY 436
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
Y ++++ C+ G A L E+ NK + T+T L+
Sbjct: 437 AYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLI 477
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 105/267 (39%), Gaps = 14/267 (5%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+++ L E +V + L Y T++ F ++ + +
Sbjct: 262 TYNVLIHGLCKGDRVSEAVEV-KRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGI---QL 317
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M L P+ + + L +GK I+ Y ++ + G P++F N
Sbjct: 318 MDEMVELGFSPTEAAVSGLVDGLRKQGK---IDDAYELVVK-----VGRFGFVPNLFVYN 369
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I ++ A ++ M ++ N PN +Y LI C GR A D M +
Sbjct: 370 ALINSLCKGGDLDKAELLYSNMSLM-NLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQ 428
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G + +YNSL++ G++ EM K T+ +++ C+ + +
Sbjct: 429 DGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQK 488
Query: 379 AMKLL-KELQNKNLIDGYTYTKLLDVL 404
A KL K + N + YT+T L+ L
Sbjct: 489 AFKLYNKMIDNGITPNVYTFTALISGL 515
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
++NI+ F G+ + E + L +M +GI PD + +++I Y S +V
Sbjct: 786 THNIIIRGFCKLGR-------FHEATKVL-SEMTENGIFPDCVTYSTLIYEYCRSGNVGA 837
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+++++ M + P+ +Y+ LI+G C G A EL D+M R+G +P +K
Sbjct: 838 SVKLWDTM-LNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNK 890
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 101/268 (37%), Gaps = 54/268 (20%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ +I K++ A +F + + +P+ +YN+L + GK I+ +
Sbjct: 508 FTALISGLCSTNKMAEASELFDELVERK---IKPTEVTYNVLIEGYCRDGK---IDKAFE 561
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN---DALRIFHQMGVVYNYLPNSFS 292
L + M G+ PD ++ +I G + V+ D + H+ V N
Sbjct: 562 -----LLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLN----EMC 612
Query: 293 YDYLIHGLCAQGRTKNAR-----------------------------------ELCDEMK 317
Y L+HG C +GR A +L +M
Sbjct: 613 YSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMH 672
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
+G P + Y S++ + G ++ + M+ ++ + +TY +++ +C+ G
Sbjct: 673 DQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMD 732
Query: 378 EAMKLLKELQNKNL-IDGYTYTKLLDVL 404
A L K +Q N+ + TY LD L
Sbjct: 733 RAGLLFKRMQAANVPPNSITYGCFLDNL 760
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 30/207 (14%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+Y ++I +++ +A + M EC P++ +Y L G+ +
Sbjct: 681 VIYTSMIDTYSKEGSFKKAFECWDLMVTE---ECFPNVVTYTALMNGLCKAGEMDRAGLL 737
Query: 234 YME-----------TIRCLFKQMVNDGIEPDIFSLN-SMIKGYILSNHV--NDALRIFHQ 279
+ T C + +G + L+ +M+KG +L+N V N +R F +
Sbjct: 738 FKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKG-LLANTVTHNIIIRGFCK 796
Query: 280 MGVVY------------NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+G + P+ +Y LI+ C G + +L D M +G P +
Sbjct: 797 LGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVA 856
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEK 354
YN L+ +NGE+++ + +M+ +
Sbjct: 857 YNLLIYGCCVNGELDKAFELRDDMLRR 883
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 18/273 (6%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V+ L D + L F W +QP F+HD +Y M LG A+ + M ++++M +
Sbjct: 339 VLKLLHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSV--H 396
Query: 170 C-GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
C T YN II+ + A L AV VF+ M+ + P +Y L G
Sbjct: 397 CKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKA---GYEPDRVTYCTLIDIHAKGG--- 450
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
Y+E L+ +M G+ PD F+ ++M+ H+ A ++F +M V P
Sbjct: 451 -----YLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEM-VENGCTP 504
Query: 289 NSFSYDYLIHGLCAQGRT-KNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
N +Y+ +I L A+ R +N +L +M+ GF P +Y+ ++ L G ++E
Sbjct: 505 NLVTYNIMI-ALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAV 563
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
EM P D Y ++D + G +A+
Sbjct: 564 FIEMRHDWAP-DEPVYGLLVDLWGKAGNVDKAL 595
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRT-KNARE 311
D F N ++K +L +H AL F + + + SY +I G+ Q R R+
Sbjct: 332 DAFQANQVLK--LLHDHT-IALGFFQWLKRQPGFKHDGHSYTTMI-GILGQARQFGTMRK 387
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L DEM P+ +YN ++ A + E VK EM + D +TY T++D
Sbjct: 388 LLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHA 447
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ G AM L +Q L D +TY+ +++ L
Sbjct: 448 KGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCL 481
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 21/244 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ ++ + L+ A +F M + C P++ +YNI+ A ++ +N
Sbjct: 474 YSAMVNCLGKGGHLAAAYKLFCEMVEN---GCTPNLVTYNIMI-ALQAKARN-------Y 522
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + L+K M G PD + + +++ H+++A +F +M +++ P+ Y
Sbjct: 523 ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM--RHDWAPDEPVYGL 580
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G A M + G P+ + NSL+SA ++ L M+ +
Sbjct: 581 LVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQG 640
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLED--DFGNSIR 413
TY T+L C +A M L +L I G+ L L D G ++R
Sbjct: 641 LVPSLQTY-TLLLSCCTEAQA--QMGLCCQLM---AITGHPAHMFLLYLPDAEPGGQNVR 694
Query: 414 HHLR 417
H R
Sbjct: 695 DHTR 698
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 12/226 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I + + +K+ A +F+ M R +PS +YN L A G+ +
Sbjct: 324 YNILINGYCKDQKIDEAFRLFEEM---RPKGLKPSTVTYNTLIGALCQSGR--------V 372
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
T + LF +M G + + ++ G + H+ +A+ +F + + PN +
Sbjct: 373 RTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKT-EHKPNIEVFSI 431
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G+C G+ + A + DE+ + G P + +YN L++ L G + E VK LW+M EK
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
D IT+ ++ + + EA++LL+E++N+N T +L
Sbjct: 492 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 537
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 34/300 (11%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F DA T + + + + + ++M F G Y +I +ARK A
Sbjct: 73 FEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLF-GDAKTYGILINGLCKARKTGLA 131
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC------------ 240
+ + + MK + C+ + +Y ++ + G T ++ E I
Sbjct: 132 IKLHEKMKGN----CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187
Query: 241 ---------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
FK+M GI D+++ NS+I G + + + M V
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM-VDRG 246
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+ P++F++ LI GLC +G+ A+++ + M KG P +YN+L++ L L G++E+
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDAT 306
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
K + ++ ++ +Y +++ C+ + EA +L +E++ K L TY L+ L
Sbjct: 307 KLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGAL 366
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G EPD ++ +++KG + N + DA+++F +M ++ +Y LI+GLC +T
Sbjct: 72 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEM-TEKGLFGDAKTYGILINGLCKARKTGL 130
Query: 309 ARELCDEMKR--KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTV 366
A +L ++MK KG V +Y ++ +L +G E + EMI D + Y ++
Sbjct: 131 AIKLHEKMKGNCKGDV---FTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187
Query: 367 LDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+D +CR GR EA++ KE++ + + D YTY L+
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLI 223
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 87/188 (46%), Gaps = 21/188 (11%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K++ EM Q L ++C ++ + L A+ +F+ +K + E +
Sbjct: 375 AQKLFVEMQ-TCGQFLKLSTYC-------VLLDGLCKNGHLEEAIDLFQSIKKT---EHK 423
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+I ++IL GK +E F ++ +G+EPD + N +I G
Sbjct: 424 PNIEVFSILLDGMCRAGK--------LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKG 475
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A+++ QM LP+S +++ +I L + A +L +EM+ + F P ++
Sbjct: 476 MLSEAVKLLWQM-EEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSP-DEAV 533
Query: 329 NSLVSALA 336
S++ LA
Sbjct: 534 TSMLLCLA 541
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%)
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
++GF P + + +LV + + + + V+ EM EK D TY +++ +C+ + G
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 378 EAMKLLKELQNKNLIDGYTYTKLLDVLEDD 407
A+KL ++++ D +TY ++D L D
Sbjct: 130 LAIKLHEKMKGNCKGDVFTYGMIIDSLCKD 159
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 115/219 (52%), Gaps = 17/219 (7%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
AV +F+ M SR RP + ++ LF+ ++R K + + L KQM GI
Sbjct: 56 AVDLFQEMTRSRP---RPRLIDFSRLFSV-VARTKQ-------YDLVLDLCKQMELKGIA 104
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVV--YNYLPNSFSYDYLIHGLCAQGRTKNA 309
++++L+ MI ++ A F MG + Y P++ ++ LI+GLC +GR A
Sbjct: 105 HNLYTLSIMINCCCRCRKLSLA---FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
EL D M G P+ + N+LV+ L LNG+V + V + M+E + +TY VL
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKV 221
Query: 370 ICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
+C+ G+ AM+LL++++ + + +D Y+ ++D L D
Sbjct: 222 MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 117/263 (44%), Gaps = 13/263 (4%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
++ + + DA Y I+ L ++ N+M F +Y T+I F A +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGR 297
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
+ + M + P + +++ L F+ GK + L K+M+
Sbjct: 298 WDDGAKLLRDMIKRK---ITPDVVAFSALIDCFVKEGK--------LREAEELHKEMIQR 346
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
GI PD + S+I G+ N ++ A + M V PN +++ LI+G C +
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLM-VSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
EL +M +G V + +YN+L+ G++E + EM+ ++ D ++Y+ +LD
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 369 EICRRGRAGEAMKLLKELQNKNL 391
+C G +A+++ ++++ +
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKM 488
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 21/263 (7%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYNTIIYFFAEARKL 189
F+ D Y + R A + + ++ M+ TP AL + F + KL
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC----FVKEGKL 333
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDG 249
A + K M R + P +Y L F + NH + MV+ G
Sbjct: 334 REAEELHKEMIQ-RGIS--PDTVTYTSLIDGFCKENQLDKANH--------MLDLMVSKG 382
Query: 250 IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
P+I + N +I GY +N ++D L +F +M + + ++ +Y+ LI G C G+ + A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSL-RGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR-PVDFITYRTVLD 368
+EL EM + P SY L+ L NGE E+ ++ ++E IEK + +D Y ++
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE-IFEKIEKSKMELDIGIYNIIIH 500
Query: 369 EICRRGRAGEAMKLLKELQNKNL 391
+C + +A L L K +
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGV 523
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
+++ G EPD + +++I G L V++AL + +M V + P + + L++GLC
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM-VEMGHKPTLITLNALVNGLCLN 190
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G+ +A L D M GF P+ +Y ++ + +G+ ++ L +M E++ +D + Y
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++D +C+ G A L E++ K D YT L+
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 130/298 (43%), Gaps = 23/298 (7%)
Query: 109 NVMTLQEDPLVCLELFNWASK---QPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA 165
++ ++ED V +LF ++ +PR + + ++ R K Y + D+ QM
Sbjct: 47 GIVDIKEDDAV--DLFQEMTRSRPRPRLIDFSRLFSVVAR----TKQYDLVLDLCKQM-E 99
Query: 166 TPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG 225
+ +I RKLS A F M L P +++ L G
Sbjct: 100 LKGIAHNLYTLSIMINCCCRCRKLSLA---FSAMGKIIKLGYEPDTVTFSTLINGLCLEG 156
Query: 226 KNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+ + E + L +MV G +P + +LN+++ G L+ V+DA+ + +M V
Sbjct: 157 RVS-------EALE-LVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM-VETG 207
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
+ PN +Y ++ +C G+T A EL +M+ + + Y+ ++ L +G ++
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
EM K D I Y T++ C GR + KLL+++ + + D ++ L+D
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F E KL A +F+ M + R RP I SY IL G+
Sbjct: 425 YNTLIQGFCELGKLEVAKELFQEMVSRR---VRPDIVSYKILLDGLCDNGEP-------- 473
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +F+++ +E DI N +I G ++ V+DA +F + + P+ +Y+
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL-KGVKPDVKTYNI 532
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC +G A L +M+ G P+ +YN L+ A G+ ++ K + E+
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 356 RPVDFITYRTVLDEICRRGRAG 377
VD T R L + R +AG
Sbjct: 593 FSVDASTLRFALSTLARMLKAG 614
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 31/239 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS------------ 223
Y ++I F + +L +A ++ M + C P+IR++NIL +
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSK---GCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 224 ----RGK-------NTYINHV----YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
RG NT I +E + LF++MV+ + PDI S ++ G +
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
AL IF ++ L Y+ +IHG+C + +A +L + KG P K+Y
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGI-YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
N ++ L G + E +M E + TY ++ G A ++ KL++E++
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L + M+ I PD+ + +++I ++ + +A + +M + P++ +Y LI G
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM-IQRGISPDTVTYTSLIDGF 362
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C + + A + D M KG P+ +++N L++ +++ ++ +M + D
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
+TY T++ C G+ A +L +E+ ++ + D +Y LLD L D+
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 119/293 (40%), Gaps = 61/293 (20%)
Query: 116 DPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA- 174
+P LE+F K + D Y+I+ + A ++DD + + P G +
Sbjct: 472 EPEKALEIFEKIEKS-KMELDIGIYNIIIHGMCNA---SKVDDAWDLFCSLP-LKGVKPD 526
Query: 175 --LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
YN +I + LS A +F+ M+ + P+ +YNIL A L G T
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH---SPNGCTYNILIRAHLGEGDATKSAK 583
Query: 233 VYMETIRCLFK--------------QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
+ E RC F +M+ G EPD+F+ ++++ + L
Sbjct: 584 LIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEE---------- 633
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
N+ YD A L MK G+ P+ +YN+++ L LN
Sbjct: 634 ----------NASVYD--------------APTLFKNMKAMGYKPNVVTYNTVIKGL-LN 668
Query: 339 GEVEETVKN-LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
G + V L +M E+ + +T T + +C++ G A+ LL++++N N
Sbjct: 669 GNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDN 721
>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 846
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 154/385 (40%), Gaps = 56/385 (14%)
Query: 53 SNAILCSCYSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMT 112
SN I Y+ + + + + V S A + + + F+ + P E+ V+
Sbjct: 53 SNPISSPFYNLLPPTHNPNNIVNLISTALKQKSFHLSHFQTQFKTILPHLGAHEISRVLI 112
Query: 113 -LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEM--------------- 156
Q D L FNW RF Y ++ LG +++ +
Sbjct: 113 RTQSDASSALTFFNWVKNDLRFTLSLQNYCLIVHILGWNQIFDQAMKLLCELIQLNNVNV 172
Query: 157 ---DDVVNQMLATPSFCG-TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR--PS 210
DDV ++ C +++ +I + + + + + F +N+E P+
Sbjct: 173 VSYDDVYKCLIDCTEDCNWNPVIFDMLIKAYVKLGMVEKGLETF-----WKNVEGSFVPN 227
Query: 211 IRSYNILFTAF------------------LSRGKNTY----INHVYM-----ETIRCLFK 243
+ + N L L +N Y + HV + + +
Sbjct: 228 VVACNCLLNGLSKINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLE 287
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
+M +G EPD+ + N +I GY + DA ++ MG+ +PN SY L++GLC +
Sbjct: 288 KMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGI-RGVVPNLISYSALMNGLCKE 346
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFIT 362
G+ K A +L ++M ++G P SYN+L+S G + ++L EMI D +T
Sbjct: 347 GKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVT 406
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQ 387
R V R G+ A+ ++ ELQ
Sbjct: 407 CRIVFQGYTREGKLLSALNMVAELQ 431
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 128/308 (41%), Gaps = 68/308 (22%)
Query: 139 TYHIMTRKLGAAKMYQEMD-DVVNQMLATPSFCGTE---ALYNTIIYFFAEARKLSRAVY 194
T++IMT L +E D D VN L G E YN +I + + R+L A Y
Sbjct: 265 TFNIMTHVLC-----REGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFY 319
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
++K M R + P++ SY+ L GK ++ LF QMV GI+PD+
Sbjct: 320 LYKIM-GIRGV--VPNLISYSALMNGLCKEGK--------IKEAHQLFNQMVQRGIDPDV 368
Query: 255 FSLNSMIKGYILSNHVNDALR-IFHQMGVVYNYLPNSFS--------------------- 292
S N++I GY R + H+M + P++ +
Sbjct: 369 VSYNTLISGYCKEGGKMQMCRSLLHEM-IGIGIRPDNVTCRIVFQGYTREGKLLSALNMV 427
Query: 293 --------------YDYLIHGLCAQGRTKNARELCDEMKRKG-FVPSSKSYNSLVSALAL 337
YDYL+ LC +GR AR + + G +VP +Y L +L
Sbjct: 428 AELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCS 487
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN--------- 388
VEE + EM +K ++ TY+ ++ +CR R EA LL+E+ +
Sbjct: 488 FNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEI 547
Query: 389 -KNLIDGY 395
+ LI+GY
Sbjct: 548 KRALINGY 555
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 108/295 (36%), Gaps = 54/295 (18%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQE---MDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
++ F D TY+I+ + ++ + ++ P+ AL N + +
Sbjct: 290 EEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGL----CK 345
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
K+ A +F M R ++ P + SYN L + + G M+ R L +M
Sbjct: 346 EGKIKEAHQLFNQMVQ-RGID--PDVVSYNTLISGYCKEGGK-------MQMCRSLLHEM 395
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
+ GI PD + + +GY + AL + ++ +P + YDYL+ LC +GR
Sbjct: 396 IGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENL-YDYLLVALCKEGR 454
Query: 306 ------------------------TKNARELCD------------EMKRKGFVPSSKSYN 329
K A LC EM +K + +Y
Sbjct: 455 PFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYK 514
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+++S L E L EM+ D R +++ C +A+ LLK
Sbjct: 515 AIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLK 569
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
Y + +CL + P IF + +IK Y+ V L F + V +++PN +
Sbjct: 175 YDDVYKCLIDCTEDCNWNPVIFDM--LIKAYVKLGMVEKGLETFWK-NVEGSFVPNVVAC 231
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L++GL E+ +EM R G + ++N + L G+ ++ L +M E
Sbjct: 232 NCLLNGLSKINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEE 291
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGY-TYTKLLDVL 404
+ D +TY +++ C++ R +A L K + + ++ +Y+ L++ L
Sbjct: 292 EGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGL 343
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMGVVYNYLPNSFSYDYLI 297
L ++MV+ GI PD+ ++I GY N V+ A L+ F + VY+ + SY+ ++
Sbjct: 532 LLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYD----TESYNAIV 587
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
C G EL D++ + G+VP+S + ++ L
Sbjct: 588 KVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGL 625
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 5/133 (3%)
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
N+V +AL + +M L N +Y +I LC RT A L +EM G +P +
Sbjct: 489 NNVEEALILKSEMAKKSMKL-NLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEI 547
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+L++ +V++ V L ++ + D +Y ++ C G E M ELQ
Sbjct: 548 KRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAELM----ELQ 603
Query: 388 NKNLIDGYTYTKL 400
+K + GY L
Sbjct: 604 DKLVKIGYVPNSL 616
>gi|414883744|tpg|DAA59758.1| TPA: hypothetical protein ZEAMMB73_211431 [Zea mays]
Length = 732
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 16/267 (5%)
Query: 126 WASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAE 185
WA +Q FRH +H + L AA + D + + M A L ++
Sbjct: 153 WAGRQKGFRHCFPAFHALASLLSAAGLPAAADQLPDLMRAHGRPISHPQL-TLLVRLHTA 211
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
AR+ RA++ + ++ + +P + + N + A + G ++E LF +M
Sbjct: 212 ARRPLRALHALRRFRH--EFDVQPQVHACNRVLGALAAAG--------HVEDALKLFDEM 261
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL--PNSFSYDYLIHGLCAQ 303
G++P + M++ + V+ R+ +G + N + P+ F Y L+ + +
Sbjct: 262 SEGGVQPIPVTFAIMVRALAHAGMVD---RLLEMIGRMRNEVCRPDVFVYTALVKTMVRR 318
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G + DEM++ G P + +Y ++V L G VEE + EM K VD + Y
Sbjct: 319 GYMDGCMRVWDEMEKDGVEPDTMAYATMVGGLCKAGMVEEAAELFKEMRSKGLLVDRMVY 378
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKN 390
+++D GR G+ +LL EL +
Sbjct: 379 ASLIDGYVAVGRVGDGCRLLNELVDAG 405
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 125/318 (39%), Gaps = 62/318 (19%)
Query: 132 RFRHD---ASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
RFRH+ H R LGA ++D + ++ S G + + T F R
Sbjct: 224 RFRHEFDVQPQVHACNRVLGALAAAGHVEDAL-KLFDEMSEGGVQPIPVT---FAIMVRA 279
Query: 189 LSRAVYV---FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQM 245
L+ A V + + RN CRP + Y L + RG YM+ ++ +M
Sbjct: 280 LAHAGMVDRLLEMIGRMRNEVCRPDVFVYTALVKTMVRRG--------YMDGCMRVWDEM 331
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS----- 292
DG+EPD + +M+ G + V +A +F +M +VY L + +
Sbjct: 332 EKDGVEPDTMAYATMVGGLCKAGMVEEAAELFKEMRSKGLLVDRMVYASLIDGYVAVGRV 391
Query: 293 ---------------------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSL 331
Y+ LI GLC GR A +L + ++ +PSS + + L
Sbjct: 392 GDGCRLLNELVDAGYRADLGIYNTLIIGLCGIGREDKAHKLFQIVLQEDLMPSSDTVSPL 451
Query: 332 VSALALNGEVEE---TVKNLWEMIEK--QRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++ A GE+ V L EM + VDF+ D GR +A+++ L
Sbjct: 452 LACYAEKGEMVTFFGLVNKLAEMGLSVVEMLVDFMKLLAGKD-----GRVLKAVEVFDAL 506
Query: 387 QNKNLIDGYTYTKLLDVL 404
+ K Y L++ L
Sbjct: 507 RQKQYCSVGIYNILIENL 524
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 110/253 (43%), Gaps = 22/253 (8%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
+VN+ LA E L + + + ++ +AV VF ++ + S+ YNIL
Sbjct: 467 LVNK-LAEMGLSVVEMLVDFMKLLAGKDGRVLKAVEVFDALRQKQYC----SVGIYNILI 521
Query: 219 TAFL---SRGKNTYINHVYMETIRCLFKQMVND-GIEPDIFSLNSMIKGYILSNHVNDAL 274
L R K+ LF++M + +PD + + MI ++ +V +A
Sbjct: 522 ENLLKIKDRKKSLL-----------LFEEMQSSVDFKPDSCTYSHMIPCFVDEGNVKEAC 570
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC-DEMKRKGFVPSSKSYNSLVS 333
++ M + N++P+ +Y L+ GLC G A L D + P+ Y +
Sbjct: 571 SCYNTM-MKENWIPSMSAYCVLVKGLCKMGEINTAISLVKDCLGNIENGPAEFKYTLTIL 629
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID 393
+ E+ + ++EMIE ++ I Y ++ C+ + EA ++ ++++N++
Sbjct: 630 EACRSKRPEKVINVVYEMIEVGCSMEEIVYSAIIYGFCKYASSTEARQVFTIMRDQNILS 689
Query: 394 GYTYTKLLDVLED 406
+ D+L +
Sbjct: 690 EANFIVYEDMLNE 702
>gi|410109917|gb|AFV61038.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
diamantinensis]
Length = 284
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 17/228 (7%)
Query: 183 FAEARKLSRAVYVFKYMK-----NSRNLECR--PSIRSYNILFTAFLSRGKNTYINHVYM 235
F RK+ + KY K LEC S+ +NIL F G +
Sbjct: 52 FDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGD--------I 103
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +F + G+ P + S N+++ GY +++ R+ M + P+ +SY
Sbjct: 104 RVAQSVFDAITKWGLRPSVVSYNTLMNGYXRLGDLDEGFRLKSAM-LASGVQPDVYSYSV 162
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC + + +A EL DEM KG P+ ++ +L+ G V+ ++ M+ +
Sbjct: 163 LINGLCKESKMDDANELFDEMLVKGLAPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQS 222
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ITY T++ +C++G +A L+ E+ K L D TYT L+D
Sbjct: 223 LLPDLITYNTLIYGLCKKGDLKQANDLIDEMGMKGLKPDKITYTTLID 270
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 27/270 (10%)
Query: 127 ASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF------------CGTEA 174
A + F HDA + +TR+ + V+ ++ F CG A
Sbjct: 26 AYLESGFXHDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 85
Query: 175 ---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
+N +++ F + + A VF + RPS+ SYN L + G
Sbjct: 86 SLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYXRLGDLD--- 139
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
E R L M+ G++PD++S + +I G + ++DA +F +M +V PN
Sbjct: 140 ----EGFR-LKSAMLASGVQPDVYSYSVLINGLCKESKMDDANELFDEM-LVKGLAPNGV 193
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
++ LI G C +GR A E+ M + +P +YN+L+ L G++++ + EM
Sbjct: 194 TFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 253
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
K D ITY T++D C+ G A +
Sbjct: 254 GMKGLKPDKITYTTLIDGCCKEGNLDTAFE 283
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I + S A + + N + P++ ++N L AF GK +
Sbjct: 296 YNSLINCLCNYGRWSDAS---RLLSNMLEKKINPNVVTFNALIDAFFKEGK--------L 344
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L ++M+ I+PD + N +I G+ + N +++A ++F M V + LPN +Y+
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM-VSKDCLPNIQTYNT 403
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C R ++ EL EM ++G V ++ +Y +++ G+ + +M+ +
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
P D +TY +L +C G+ A+ + K LQ + ++ + Y +++
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 32/245 (13%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---------LSRGKNTY---INH--- 232
K+ AV +F M SR PSI +N L +A +S G+ I+H
Sbjct: 63 KVDDAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 233 VYMETIRC------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
Y I C + +M+ G EPDI +L+S++ GY S ++DA+ + QM
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
V Y P++F++ LIHGL + A L D+M ++G P +Y ++V+ L G+
Sbjct: 180 -VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
++ + L +M + + + + T++D +C+ A+ L E++ K + + TY
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 400 LLDVL 404
L++ L
Sbjct: 299 LINCL 303
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 16/196 (8%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY+ + K ++ ++ +M + G Y TII F +A A VFK
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREM-SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M ++R I +Y+IL S GK ++T +FK + +E +IF N
Sbjct: 459 MVSNR---VPTDIMTYSILLHGLCSYGK--------LDTALVIFKYLQKSEMELNIFIYN 507
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+MI+G + V +A +F + + P+ +Y+ +I GLC++ + A +L +MK
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLSIK----PDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 319 KGFVPSSKSYNSLVSA 334
G +P+S +YN+L+ A
Sbjct: 564 DGTLPNSGTYNTLIRA 579
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+ T+I+ K S AV + M C+P + +Y + RG +
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQR---GCQPDLVTYGTVVNGLCKRGD--------I 239
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L +M I+ ++ N++I HV A+ +F +M PN +Y+
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET-KGIRPNVVTYNS 298
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+ LC GR +A L M K P+ ++N+L+ A G++ E K EMI++
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLLD 402
D ITY +++ C R EA ++ K + +K+ L + TY L++
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 35/259 (13%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL------------- 222
YN +I F +L A +FK+M + +C P+I++YN L F
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSK---DCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 223 ---SRG------KNTYINHVYMETIRC-----LFKQMVNDGIEPDIFSLNSMIKGYILSN 268
RG T I + + C +FKQMV++ + DI + + ++ G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++ AL IF + L N F Y+ +I G+C G+ A +L + K P +Y
Sbjct: 483 KLDTALVIFKYLQKSEMEL-NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTY 538
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+++S L ++E +M E + TY T++ R + +L+KE+++
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Query: 389 KNLI-DGYTYTKLLDVLED 406
+ D T + + ++L D
Sbjct: 599 SGFVGDASTISLVTNMLHD 617
>gi|356574119|ref|XP_003555199.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Glycine max]
Length = 942
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T YN+I + + + A+ + K M+ + P I++ +L G
Sbjct: 501 THFTYNSIYGCLCKRKDVLGAIDMLKGMRACGH---EPWIKNSTLLVKELCDHG------ 551
Query: 232 HVYMETIRCLF-KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
M C F MV G PDI S ++ I G I +N AL++F + + P+
Sbjct: 552 ---MAIEACNFLDSMVQQGFLPDIVSYSAAIGGLIQIQELNRALQLFSDL-YSRGHCPDV 607
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+ + L+ GLC R + A +L DE+ KGF PS +YN L+ + NG V++ + L
Sbjct: 608 VASNILMRGLCKAYRVREAEKLLDEIVVKGFFPSVVTYNLLIDSWCKNGSVDKAMALLSR 667
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
M + R + ITY T++D CR R +A+ + E++ K
Sbjct: 668 MSGEDREPNVITYSTLVDGFCRAERPDDALLVWNEMERKG 707
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 129/337 (38%), Gaps = 51/337 (15%)
Query: 83 KPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHI 142
+P D + C L P L + T + + F+WAS Q FRH TY+
Sbjct: 52 QPNADTPELNCFAPILTPPLVESVLTRLRTWK----LAHSFFHWASNQ-GFRHTCYTYNS 106
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS 202
+ L + + ++ Q+ + T +I A A ++F M+
Sbjct: 107 IASILSRSHQTSPLKTLLKQISDSAPCSFTPGALGFLIRCLGHAGLAREAHHLFDEMR-L 165
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
+ L C P+ YN L A G+ ++ I ++M G E D F+L +++
Sbjct: 166 KGL-CVPNDYCYNCLLEALSKSGE--------VDLIEARLEEMKGFGWEFDKFTLTPLLQ 216
Query: 263 GYILSNHVNDALRIFHQM-------GVVYNYLPNSFS----------------------- 292
Y + ++ALR+++ M G V + L SFS
Sbjct: 217 AYCNARRFDEALRVYNVMREKGWVDGHVCSMLALSFSKWGDVDKAFELVERMEGHGMRLN 276
Query: 293 ---YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ LIHG +GR A +L D M R GF P ++ L+ L NG+ + L
Sbjct: 277 EKTFCVLIHGFVKEGRVDRALQLFDIMCRVGFTPPVSLFDVLIGGLCRNGDSHRALSLLS 336
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
EM E D + ++ RG KLL+E+
Sbjct: 337 EMKEFGVTPDVGIFTKLISAFPDRGVIA---KLLEEV 370
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 18/172 (10%)
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
Y EA KL + V + PS+ +YN+L ++ G ++
Sbjct: 621 YRVREAEKLLDEIVVKGFF---------PSVVTYNLLIDSWCKNGS--------VDKAMA 663
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +M + EP++ + ++++ G+ + +DAL ++++M PN ++ LI+GL
Sbjct: 664 LLSRMSGEDREPNVITYSTLVDGFCRAERPDDALLVWNEMER-KGCFPNQIAFMALIYGL 722
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
C R A EM++K P S Y +L+S+ + ++ + EM+
Sbjct: 723 CKCCRPTTALHYLREMEQKDMKPDSFIYIALISSFLSDMDLASAFEIFKEMV 774
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 7/164 (4%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS---YDYLI 297
F N G ++ NS I + +H L+ + + + P SF+ +LI
Sbjct: 88 FFHWASNQGFRHTCYTYNS-IASILSRSHQTSPLKTLLKQ--ISDSAPCSFTPGALGFLI 144
Query: 298 HGLCAQGRTKNARELCDEMKRKGF-VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
L G + A L DEM+ KG VP+ YN L+ AL+ +GEV+ L EM
Sbjct: 145 RCLGHAGLAREAHHLFDEMRLKGLCVPNDYCYNCLLEALSKSGEVDLIEARLEEMKGFGW 204
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKL 400
D T +L C R EA+++ ++ K +DG+ + L
Sbjct: 205 EFDKFTLTPLLQAYCNARRFDEALRVYNVMREKGWVDGHVCSML 248
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L ++M G+ + + +I G++ V+ AL++F M V + P +D LI GL
Sbjct: 264 LVERMEGHGMRLNEKTFCVLIHGFVKEGRVDRALQLFDIMCRV-GFTPPVSLFDVLIGGL 322
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G + A L EMK G P + L+SA G + + ++ + E++ V
Sbjct: 323 CRNGDSHRALSLLSEMKEFGVTPDVGIFTKLISAFPDRGVIAKLLEEVPGGEEERTLV-- 380
Query: 361 ITYRTVLDEICRRGRAGEAMKLLK 384
+ Y VL G EA + L+
Sbjct: 381 LIYNAVLTCYVNDGLMDEACRFLR 404
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ I + ++L+RA+ +F + + + P + + NIL + +
Sbjct: 575 YSAAIGGLIQIQELNRALQLFSDLYSRGHC---PDVVASNILMRGLCKAYR--------V 623
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L ++V G P + + N +I + + V+ A+ + +M + PN +Y
Sbjct: 624 REAEKLLDEIVVKGFFPSVVTYNLLIDSWCKNGSVDKAMALLSRMSG-EDREPNVITYST 682
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ G C R +A + +EM+RKG P+ ++ +L+ L + L EM +K
Sbjct: 683 LVDGFCRAERPDDALLVWNEMERKGCFPNQIAFMALIYGLCKCCRPTTALHYLREMEQKD 742
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D Y ++ A ++ KE+
Sbjct: 743 MKPDSFIYIALISSFLSDMDLASAFEIFKEM 773
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 103/268 (38%), Gaps = 68/268 (25%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR----PSIRSYNILFTAFLSRGKNT 228
E + +I+ F + ++ RA+ +F M CR P + +++L G +
Sbjct: 277 EKTFCVLIHGFVKEGRVDRALQLFDIM-------CRVGFTPPVSLFDVLIGGLCRNGDS- 328
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY------------------------ 264
H + L +M G+ PD+ +I +
Sbjct: 329 ---HRALS----LLSEMKEFGVTPDVGIFTKLISAFPDRGVIAKLLEEVPGGEEERTLVL 381
Query: 265 ----ILSNHVNDAL-----RIFH-----------QMGVVYN-----YLPNSFSYDYLIHG 299
+L+ +VND L R QM +N PN S+ +I+G
Sbjct: 382 IYNAVLTCYVNDGLMDEACRFLRMMIQSKASGDVQMDGFFNKVKKLVFPNGASFSIVING 441
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
L + A L ++MK+ PS YN+L+++L + +EE+ + L EM E
Sbjct: 442 LLKNDQLDLALSLFNDMKQFVDRPSVLIYNNLINSLCDSNRLEESRELLREMKESGVEPT 501
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQ 387
TY ++ +C+R A+ +LK ++
Sbjct: 502 HFTYNSIYGCLCKRKDVLGAIDMLKGMR 529
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 16/230 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + KL +A M++ +P+I +YN L + RG+ +
Sbjct: 229 FNIMINVLCKEGKLKKAKGFLGIMES---FGIKPTIVTYNTLVQGYSLRGR--------I 277
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E R + +M + G +PD+ + N ++ ++ LR +G+V P+S SY+
Sbjct: 278 EGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGLV----PDSVSYNI 333
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G G + A DEM ++G VP+ +YN+L+ L + ++E + E+ EK
Sbjct: 334 LIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 393
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+D +TY V++ C+ G A +A L E+ + +TYT L+ VL
Sbjct: 394 IVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVL 443
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF+++V G++PD+ +N+++ G+ + +++ A + +M + N P+ +Y+ L+ GL
Sbjct: 455 LFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRM-NIDPDDVTYNCLMRGL 513
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G+ + AREL EMKR+G P SYN+L+S + G+ + EM+
Sbjct: 514 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTL 573
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+TY +L + + A +LL+E++++ ++
Sbjct: 574 LTYNALLKGLSKNQDGELAEELLREMKSEGIV 605
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 22/230 (9%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN I+ + RA V + MK + P SYNIL + G +
Sbjct: 299 YNPILSWMCNE---GRASEVLREMKG---IGLVPDSVSYNILIRGCSNNGD--------L 344
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---LRIFHQMGVVYNYLPNSFS 292
ET +MV G+ P ++ N++I G + N + A +R + G+V + S +
Sbjct: 345 ETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD----SVT 400
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ +I+G C G K A L DEM G P+ +Y SL+ L + E + +++
Sbjct: 401 YNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVV 460
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
K D + T++D C G A LLKE+ N+ D TY L+
Sbjct: 461 GKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLM 510
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E I C F M G +P + N ++ N + +A +F+ N ++++
Sbjct: 174 EAIEC-FYLMKEKGFDPKTETCNHILSLLSRLNRIENAW-VFYADMYRMEIKSNVYTFNI 231
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I+ LC +G+ K A+ M+ G P+ +YN+LV +L G +E + EM K
Sbjct: 232 MINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKG 291
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D TY +L +C GRA E +L+E++ L+ D +Y L+
Sbjct: 292 FQPDLQTYNPILSWMCNEGRASE---VLREMKGIGLVPDSVSYNILI 335
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+ NT++ + RA F +K + P +YN L GK
Sbjct: 469 VMMNTLMDGHCATGNMDRA---FSLLKEMDRMNIDPDDVTYNCLMRGLCGEGK------- 518
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
E R L +M GI+PD S N++I GY A + +M + + P +Y
Sbjct: 519 -FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEM-LSLGFNPTLLTY 576
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
+ L+ GL + A EL EMK +G VP+ S+ S++ A++
Sbjct: 577 NALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMS 619
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 118/253 (46%), Gaps = 17/253 (6%)
Query: 150 AKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRP 209
K Y ++D+ + + G YNT+I+ +++ RA + + MK++ + P
Sbjct: 274 GKAYHLLEDMKRK-----GYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFV---P 325
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
I +Y+IL A L R K + T+R D P++ S N++I G+ +
Sbjct: 326 DIFTYDILI-AGLCRAKRLSEARDLLGTLRN------EDDCTPNVVSYNTLIDGFSKAAR 378
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
VNDA ++F +M V P+ +Y LI GLC GR A +EM K +P Y+
Sbjct: 379 VNDAYQLFLEM-VTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYS 437
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
S++S L GE++ M+ + Y +++ +C+ GR +A +KE+ +
Sbjct: 438 SVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTER 497
Query: 390 NL-IDGYTYTKLL 401
DG TY L+
Sbjct: 498 GCSPDGVTYGTLI 510
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I A++LS A + ++N + C P++ SYN L F K +N Y
Sbjct: 330 YDILIAGLCRAKRLSEARDLLGTLRNEDD--CTPNVVSYNTLIDGF---SKAARVNDAYQ 384
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +MV G PD+ + +++I+G + ++A +M V LP Y
Sbjct: 385 -----LFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEM-VGKKILPKVPVYSS 438
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC G A + D M G P+ YNSL+ L G + + + EM E+
Sbjct: 439 VISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERG 498
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKL 382
D +TY T++ +CR R EA L
Sbjct: 499 CSPDGVTYGTLIVGLCRWSRTDEACDL 525
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 126/306 (41%), Gaps = 47/306 (15%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F D TY I+ L AK E D++ + YNT+I F++A +++ A
Sbjct: 323 FVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDA 382
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+F M + P + +Y+ L + G+ + H Y+E +MV I P
Sbjct: 383 YQLFLEMVTAGQ---HPDVVTYSTLIRGLCNAGRASE-AHSYLE-------EMVGKKILP 431
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
+ +S+I G + ++ A +F M V PN Y+ LI+GLC GR +A+
Sbjct: 432 KVPVYSSVISGLCRAGELDAASTVFDSM-VANGCQPNLAVYNSLIYGLCKTGRLCDAKLR 490
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEET----VKNLWEMIE--------------- 353
EM +G P +Y +L+ L +E V++L + IE
Sbjct: 491 VKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRC 550
Query: 354 ---KQR-----------PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYT 398
QR P F Y TV++ +C+ EA +LL+++ + DG T
Sbjct: 551 LEQAQRVLRVVLATGNSPTAFF-YATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVD 609
Query: 399 KLLDVL 404
L+ +
Sbjct: 610 ALVGAM 615
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 125/314 (39%), Gaps = 55/314 (17%)
Query: 123 LFNWASKQPRFRHDASTYH----IMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
F WA + FRH TY+ + R + Y+ + Q L S Y
Sbjct: 76 FFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSIT-----YGI 130
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY---M 235
+I KL A +++ M + R L RP + + L A G N + Y M
Sbjct: 131 LIRGLCNFGKLKLACSLYEEMVD-RGL--RPVVLTCKFLLNALCKSG-NLELALRYFEKM 186
Query: 236 ETIRCL----------------------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA 273
+I C F++M + I P+ ++ +I G + + V +A
Sbjct: 187 SSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEA 245
Query: 274 LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVS 333
R+ +M V P +Y +I G C G A L ++MKRKG+ + +YN+L+
Sbjct: 246 ERVLQEMPV-----PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIH 300
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN--- 390
E++ + L EM D TY ++ +CR R EA LL L+N++
Sbjct: 301 GHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCT 360
Query: 391 --------LIDGYT 396
LIDG++
Sbjct: 361 PNVVSYNTLIDGFS 374
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 107/282 (37%), Gaps = 43/282 (15%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + R L A E + +M+ +Y+++I A +L A V
Sbjct: 397 DVVTYSTLIRGLCNAGRASEAHSYLEEMVGK-KILPKVPVYSSVISGLCRAGELDAASTV 455
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M + C+P++ YN L G+ + + K+M G PD
Sbjct: 456 FDSMVAN---GCQPNLAVYNSLIYGLCKTGR--------LCDAKLRVKEMTERGCSPDGV 504
Query: 256 SLNSMIKG-------------YILS------------NHVNDALRIFHQMGVVYNYL--- 287
+ ++I G Y+ S N V +LR Q V +
Sbjct: 505 TYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLAT 564
Query: 288 ---PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
P +F Y +I LC + AR+L ++M G P + ++LV A+ +
Sbjct: 565 GNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVA 624
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ L EM+ TY T+L+ + + G+ EA +L+ L
Sbjct: 625 MAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRL 666
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 106/241 (43%), Gaps = 12/241 (4%)
Query: 147 LGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
+ + + ++ V+ +LAT + T Y T+I + L+ A + + M +
Sbjct: 545 IASLRCLEQAQRVLRVVLATGN-SPTAFFYATVIESLCKENNLAEARQLLEDMIGA---G 600
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
+P + + L A + R + ++E +MV G +P + + ++++
Sbjct: 601 IKPDGSTVDALVGA-MCRQDKAVVAMAFLE-------EMVRLGSKPSVGTYSTLLNALFK 652
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ ++A + ++ + P+ Y LI Q + + AR + E+K K + S
Sbjct: 653 AGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIV 712
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+YN+L+ L ++ + L EM + V+ T+ ++ CR G+ A+++L E+
Sbjct: 713 AYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM 772
Query: 387 Q 387
+
Sbjct: 773 K 773
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 79/196 (40%), Gaps = 36/196 (18%)
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT---------------------- 228
+AV +++ L +PS+ +Y+ L A GK +
Sbjct: 620 KAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWY 679
Query: 229 ------YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGV 282
Y N +E R + +++ + I + N+++KG + ++ + +M
Sbjct: 680 VGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKR 739
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
++ N +++ LI G C G+T A + EMK K PS+ LV LA E E
Sbjct: 740 -NEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMK-KVLTPSAAIIKFLVDELA-RAERE 796
Query: 343 ETVKNLWEMIEKQRPV 358
+ K+L +RPV
Sbjct: 797 QESKDL-----VKRPV 807
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 109/289 (37%), Gaps = 65/289 (22%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-----NT 228
A+YN++IY + +L A K M C P +Y L + +
Sbjct: 469 AVYNSLIYGLCKTGRLCDAKLRVKEMTER---GCSPDGVTYGTLIVGLCRWSRTDEACDL 525
Query: 229 YIN-------------HVYMETIRCL------FKQMVNDGIEPDIFSLNSMIKGYILSNH 269
Y+ +V + ++RCL + ++ G P F ++I+ N+
Sbjct: 526 YVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENN 585
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
+ +A ++ M + P+ + D L+ +C Q + A +EM R G PS +Y+
Sbjct: 586 LAEARQLLEDM-IGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYS 644
Query: 330 SLVSALALNG------------------------------------EVEETVKNLWEMIE 353
+L++AL G +VEE L E+
Sbjct: 645 TLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKS 704
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGYTYTKLL 401
K + Y T+L + R +LL+E++ N+ +++ T+ L+
Sbjct: 705 KWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILI 753
>gi|224576651|gb|ACN56999.1| At1g03560-like protein [Capsella grandiflora]
Length = 207
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F+ M+ G +P++ +I GY S V DA+R+ H+M + + P+ +Y +++GL
Sbjct: 9 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM-IDEGFKPDVVTYSVVVNGL 67
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C GR + A + + GF +S Y+SL+ L G ++E + EM EK D
Sbjct: 68 CKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDS 127
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG--YTYTKLL 401
Y ++D + + G+ EAM L K ++ + D YTYT L+
Sbjct: 128 YCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILI 170
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G+ + + M RKG P+ Y L+ A +G VE+ ++ L MI++ D +TY
Sbjct: 1 GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60
Query: 364 RTVLDEICRRGRAGEAMKLLKELQ-NKNLIDGYTYTKLLDVL 404
V++ +C+ GR EA+ + + N I+ Y+ L+D L
Sbjct: 61 SVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGL 102
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF++M G D + N++I V++A+ +F +M ++Y LI G+
Sbjct: 114 LFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGM 173
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
R + A +L D M KG P++ + +L +
Sbjct: 174 FKDHRNEEALKLWDMMIDKGITPTAACFRALSTG 207
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y ++I+ +A KL +A ++ + R+ P + +N + G+
Sbjct: 30 EFTYGSLIHGLCKAGKLDQA---YELLDEMRDRGIPPGVAVHNGVIRGLCKAGR------ 80
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ + + FK + PDI + N ++ + S V +A +IF M LPN +
Sbjct: 81 -FGDALG-YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVT 138
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y +I+GLC G+ A EL D M G P+ +Y+ LV L G ++ L EM
Sbjct: 139 YTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
+ D I Y T+L+ +C+ R EA++L++
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQ 230
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 33/264 (12%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK------- 226
A++N +I +A + A+ FK + ++ C P I ++NIL A + G+
Sbjct: 66 AVHNGVIRGLCKAGRFGDALGYFKTVAGTK---CTPDIITFNILVDALVKSGRVEEAFQI 122
Query: 227 -----------------NTYINHV----YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
T IN + ++ L M G P++ + + +++G
Sbjct: 123 FESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLC 182
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ + + +M + P+ Y+ L++GLC R A EL M R G P+
Sbjct: 183 KAGRTDKGFTLLQEM-TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTV 241
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+YNSL+ + +V+ + + M E+ P D I Y TV+ +CR R +A LLK+
Sbjct: 242 VTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301
Query: 386 LQNKNLI-DGYTYTKLLDVLEDDF 408
+ + D TY+ ++D L D+
Sbjct: 302 MVAARCVPDVITYSTIIDGLCKDW 325
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D T++I+ L + +E + M + Y T+I + KL RA+ +
Sbjct: 99 DIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIEL 158
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M + C P++ +Y++L G+ + L ++M G +PD+
Sbjct: 159 LDLMNET---GCCPNVITYSVLVEGLCKAGRT--------DKGFTLLQEMTRRGFQPDVI 207
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
N+++ G S +++AL + M + P +Y+ L+ C + A L
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLM-IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M +G P +YN++++ L + +++ L +M+ + D ITY T++D +C+ R
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 376 AGEAMKL 382
KL
Sbjct: 327 VDADWKL 333
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 128/314 (40%), Gaps = 62/314 (19%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F+ D Y+ + L ++ E ++V M+ + + T YN+++ F ++++ RA
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY-PTVVTYNSLMELFCRSKQVDRA 260
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M C P + +YN + + ++ + L KQMV P
Sbjct: 261 FRLIQVMSER---GCPPDVINYNTVIAGLCRDAR--------LDDAQALLKQMVAARCVP 309
Query: 253 DIFSLNSMIKGYILSNHVN---------DALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
D+ + +++I G V+ + L + Q G PN+ +Y +I GLC
Sbjct: 310 DVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP----PNAGTYAVVIEGLCRA 365
Query: 304 GRTKNARELCDEMKRKGFVPSSKS-----------------------------------Y 328
+++ A L M VP S Y
Sbjct: 366 RKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAY 425
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ L+ GEV++ V+ M+E RP TY +VLD +C GR EA+++++ + +
Sbjct: 426 AALIDGLSKGGEVDKAVRVFELMVESFRP-GVATYNSVLDGLCGVGRIEEAVRMVEGMIH 484
Query: 389 KNLI-DGYTYTKLL 401
K DG +Y L+
Sbjct: 485 KECFPDGASYGALI 498
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 16/222 (7%)
Query: 165 ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR 224
P GT Y +I ARK +A+ + + M +S E P + S++++ +
Sbjct: 347 GCPPNAGT---YAVVIEGLCRARKSQQALALLRRMIDS---EVVPDLSSFSMVIGSLC-- 398
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
K+ ++ Y +F M +P+ + ++I G V+ A+R+F M V
Sbjct: 399 -KSHDLDAAYK-----IFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM--VE 450
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
++ P +Y+ ++ GLC GR + A + + M K P SY +L+ L VEE
Sbjct: 451 SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEA 510
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ + K ++ Y +++E+C++ R +A + +L
Sbjct: 511 YELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKL 552
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
+PN F+Y LIHGLC G+ A EL DEM+ +G P +N ++ L G + +
Sbjct: 27 VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALG 86
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN--LIDGYTYTKLLDVL 404
+ + D IT+ ++D + + GR EA ++ + + + L + TYT +++ L
Sbjct: 87 YFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGL 146
Query: 405 EDD 407
D
Sbjct: 147 CKD 149
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL A + + MK + C P+ +Y ++ L R + + + L ++M++
Sbjct: 332 KLEAACEILEMMKQT---GCPPNAGTYAVVIEG-LCRARKS-------QQALALLRRMID 380
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+ PD+ S + +I S+ ++ A +IF M PN +Y LI GL G
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE-RECKPNPVAYAALIDGLSKGGEVD 439
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A + E+ + F P +YNS++ L G +EE V+ + MI K+ D +Y ++
Sbjct: 440 KAVRV-FELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498
Query: 368 DEICRRGRAGEAMKLLKELQNKNL 391
+CR EA +L + ++ K
Sbjct: 499 RGLCRVSCVEEAYELFQAVEAKGF 522
>gi|255580552|ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529296|gb|EEF31265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 137/306 (44%), Gaps = 45/306 (14%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
EDP L LF+ Q FRHD +Y + KL ++ ++ ++ V+ + C +
Sbjct: 59 EDPDKALSLFH-DYLQNGFRHDYPSYSALVYKLARSRRFEAVETVLGYLQDFNVRC-RDT 116
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKN--------------------------------S 202
L+ + + + +++A+ +F M S
Sbjct: 117 LFIALFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRS 176
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
+ R + +NIL +L +G+ V F +M+ +EP + + NS+I
Sbjct: 177 SEMGFRLNSVPFNILIKGWLKKGEWYQAGKV--------FDEMLERKVEPSVVTYNSLI- 227
Query: 263 GYILSN-HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
GY+ N + A +F M + PN+ +Y L+ GLC+ G K A+++ +M+ +G
Sbjct: 228 GYLCRNGELGKAKGLFKDM-IKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGC 286
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P + ++ L++ L G++EE L EM +++ D + Y +++ +C+ G+ EA K
Sbjct: 287 KPKNLNFGVLMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYK 346
Query: 382 LLKELQ 387
L E+Q
Sbjct: 347 TLFEMQ 352
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 124/295 (42%), Gaps = 23/295 (7%)
Query: 107 LCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML-- 164
L NV+ + +LF+ +S+ FR ++ ++I+ + + + V ++ML
Sbjct: 156 LLNVLVDNDRLFDAKQLFDRSSEMG-FRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLER 214
Query: 165 -ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
PS YN++I + +L +A +FK M RP+ +Y +L S
Sbjct: 215 KVEPSV----VTYNSLIGYLCRNGELGKAKGLFKDMIKKGK---RPNAVTYALLMEGLCS 267
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV 283
G+ Y E + LF M G +P + ++ + +A + +M
Sbjct: 268 MGE-------YKEAKKMLF-DMEYRGCKPKNLNFGVLMNDLGKKGKIEEAKLLLLEMKK- 318
Query: 284 YNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
+ P+ Y+ LI+ LC +G+ A + EM+ G ++ +Y L GE EE
Sbjct: 319 RRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGCEANAATYRMLADGFCQVGEFEE 378
Query: 344 TVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI---DGY 395
+K L M+ + T+ + + + G A +L+E++ + + DG+
Sbjct: 379 GLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAFFVLEEMEKRKMALDSDGW 433
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
V A+R+F++M +N + S++ L++ L R +A++L D GF +S +N
Sbjct: 131 VAKAIRLFNEM-TGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRSSEMGFRLNSVPFN 189
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
L+ GE + K EM+E++ +TY +++ +CR G G+A L K++ K
Sbjct: 190 ILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELGKAKGLFKDMIKK 249
Query: 390 N-LIDGYTYTKLLDVL 404
+ TY L++ L
Sbjct: 250 GKRPNAVTYALLMEGL 265
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 13/229 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N +++ FA KL + V ++ K+ +P++ +YNI+ G +E
Sbjct: 64 NGLLHKFA---KLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGD--------VE 112
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
R LF++M G+ PD + NSMI G+ ++D + F +M + P+ +Y+ L
Sbjct: 113 AARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE-PDVITYNAL 171
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I+ C G+ E EMKR G P+ SY++LV A G +++ +K +M
Sbjct: 172 INCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 231
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLLDVL 404
+ TY +++D C+ G +A +L E LQ + TYT L+D L
Sbjct: 232 VPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGL 280
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
VF + ++RN+ C P ++ LF+ + G + E I+C F +M + P
Sbjct: 10 VFDVLWSTRNV-CVPGFGVFDALFSVLIDLG-------MVEEAIQC-FSKMKRFRVFPKT 60
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
S N ++ + + R F M + P F+Y+ +I +C +G + AR L +
Sbjct: 61 RSCNGLLHKFAKLGKTDGVKRFFKDM-IGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFE 119
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EMK +G +P + +YNS++ G +++TV EM + D ITY +++ C+ G
Sbjct: 120 EMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 179
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ + ++ +E++ L + +Y+ L+D
Sbjct: 180 KLPKGLEFFREMKRNGLKPNVVSYSTLVDAF 210
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 106/231 (45%), Gaps = 14/231 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN++I F + +L V F+ MK+ + C P + +YN L F GK +
Sbjct: 133 YNSMIDGFGKVGRLDDTVCFFEEMKD---MCCEPDVITYNALINCFCKFGK--------L 181
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
F++M +G++P++ S ++++ + + A++ + M V +PN ++Y
Sbjct: 182 PKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV-GLVPNEYTYTS 240
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI C G +A L +EM + G + +Y +L+ L E + L EM+E
Sbjct: 241 LIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELD 300
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI--DGYTYTKLLDVL 404
V +T+ ++D +C+ +A+ + N + + YT ++D L
Sbjct: 301 IKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGL 351
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 70/151 (46%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +MV I+ + + +I G + V+ A+ F ++ + N+ Y +I GL
Sbjct: 292 LLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGL 351
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C + + A L ++M +KG VP +Y SL+ G V E + +M+E +D
Sbjct: 352 CKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDL 411
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ Y +++ + + +A L+E+ + +
Sbjct: 412 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 442
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 242 FKQMVND-GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
F ++ ND G++ + +MI G N V A +F QM +P+ +Y L+ G
Sbjct: 328 FGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQM-AQKGLVPDRTAYTSLMDGN 386
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
QG A L D+M G +Y SLV L+ ++++ L EMI + D
Sbjct: 387 FKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 446
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ +VL + G EA++L L L+
Sbjct: 447 VLCISVLKKHYELGCINEAVELQSYLMKHQLL 478
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 150/340 (44%), Gaps = 55/340 (16%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTY----HIMT--RKLGAAKMYQEM------- 156
++ +Q+D ++ LE FNW + H T+ HI+T RK +A++ +
Sbjct: 66 LLKIQKDHVLSLEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGFI 125
Query: 157 ---DDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
D + +L + C + +++++ A +K A F MK L P++
Sbjct: 126 DLPDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFL---PTVE 182
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRC---------------------------LFKQM 245
S N ++ L + Y E RC +F++M
Sbjct: 183 SCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEM 242
Query: 246 VNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCA 302
+ GI P+ S N++I GY +N A+++ + M GV N + +++ LI G C
Sbjct: 243 ESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVV----TFNSLIDGFCK 298
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+G+ A ++ EMK P++ +YN+L++ + G E + EM D +T
Sbjct: 299 EGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILT 358
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
Y ++ +C+ G+ +A ++KEL +NL+ + T++ L+
Sbjct: 359 YNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALI 398
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 104/210 (49%), Gaps = 12/210 (5%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N ++ F ++ KL +AV VF+ M++ + P+ SYN L + +G +
Sbjct: 220 NMVMRAFCKSGKLEKAVQVFEEMES---VGISPNDTSYNTLIMGYCRKG--------LLN 268
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ L M G+E ++ + NS+I G+ +++A ++F +M V+ N PN+ +Y+ L
Sbjct: 269 SAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVL-NVAPNTITYNTL 327
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I+G G ++ R L +EM R G +YN+L+ L G+ ++ + E+ ++
Sbjct: 328 INGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENL 387
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ T+ ++ C R + A +L K +
Sbjct: 388 VPNASTFSALISGQCIRNNSDRAFQLYKSM 417
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 171 GTEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
G EA +N++I F + KL A VF MK L P+ +YN L G +
Sbjct: 281 GVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKV---LNVAPNTITYNTLINGHSQMGNS 337
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
E R L+++M +G++ DI + N++I G A + ++ N +
Sbjct: 338 --------EMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDK-ENLV 388
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
PN+ ++ LI G C + + A +L M R G P+ +++N LVSA N + E
Sbjct: 389 PNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLV 448
Query: 348 LWEMIEKQRPVDFITYRTVLDEI----CRRGRAGEAMKLLKELQNKNLI 392
L EM E+ F VL EI C G+ AMKL EL+ ++++
Sbjct: 449 LMEMFERC----FTPGSDVLSEIYHGLCCCGKEHLAMKLSSELKARHMM 493
>gi|218196744|gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indica Group]
Length = 633
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ + MV +G+ PD+ + +++I G + V +AL + M + PN+ +Y ++H
Sbjct: 240 VVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLM-LEEGCQPNAHTYTPIVHAY 298
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C GR A+ L + M GF PS+ +YN LV AL G EE L E K D
Sbjct: 299 CTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDV 358
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
ITY + +D +C+ GR ++ L+ ++ + L
Sbjct: 359 ITYSSYMDGLCKAGRIDKSFALVDKMLSNGL 389
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+ M DG+ PD + ++ Y DA + V P+ +Y LI GL
Sbjct: 204 VLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGL 263
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C+ G+ A + D M +G P++ +Y +V A G + E + L MI
Sbjct: 264 CSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPST 323
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
TY +++ +C+ G E LL+E K D TY+ +D L
Sbjct: 324 ATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGL 368
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 120/299 (40%), Gaps = 70/299 (23%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTIIYFFAEARKLSRAVY 194
D TY + L +A E V++ ML C A Y I++ + ++ A
Sbjct: 252 DVVTYSTLISGLCSAGQVAEALGVLDLMLE--EGCQPNAHTYTPIVHAYCTGGRIHEAKR 309
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR--------------- 239
+ M S PS +YN+L A G ++ + E+
Sbjct: 310 LLNTMIASGF---APSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMD 366
Query: 240 ------------CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH---QMG--- 281
L +M+++G++P +LN ++ G S+ A R+ ++G
Sbjct: 367 GLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDA 426
Query: 282 --VVYNYL--------------------------PNSFSYDYLIHGLCAQGRTKNARELC 313
V YN + PNS++++ ++H LC GR A LC
Sbjct: 427 NVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRLHKA--LC 484
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
++ K FV + +YN+L+ L+++GE E L++MIE + ITY V+D +CR
Sbjct: 485 -LLRSKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCR 542
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 84/216 (38%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T+I A +++ A+ V M C+P+ +Y + A+ + G+ +
Sbjct: 256 YSTLISGLCSAGQVAEALGVLDLMLEE---GCQPNAHTYTPIVHAYCTGGR--------I 304
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L M+ G P + N +++ + + + + P+ +Y
Sbjct: 305 HEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEE-STAKGWTPDVITYSS 363
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+ GLC GR + L D+M G PS + N L+ + + + L E
Sbjct: 364 YMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELG 423
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ + Y TV+ +C R +KL ++ K +
Sbjct: 424 WDANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGI 459
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 7/235 (2%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKN--SR-NLECRPSIRSYNILFTAFLSRGKNTYINH 232
Y T+I ++ A+ + + M N SR + C+P++ +YNI+ G+
Sbjct: 177 YGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQ 236
Query: 233 VY--METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
++ M+T + +M++ G++PD+ + N +I V +A ++ M + +P+
Sbjct: 237 LFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM-IESGIVPDL 295
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE 350
+Y+ LI G C G +AREL M KG P SYN L++ + +VEE +K E
Sbjct: 296 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 355
Query: 351 MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLID-GYTYTKLLDVL 404
M+ + + ITY ++L I G+ +A KL ++ + + YTY LD L
Sbjct: 356 MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 410
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 33/215 (15%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P+I +YN L K + H E R LF +M G PD+ + ++IKG +
Sbjct: 137 PNIVTYNTLI-------KGLCMEHRISEATR-LFLRMQKLGCTPDVVTYGTLIKGLCGTG 188
Query: 269 HVNDALRIFHQM-----GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
++N AL++ +M N PN +Y+ ++ GLC GR A++L +EMK +G +P
Sbjct: 189 NINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIP 248
Query: 324 SSK----------SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+ ++N L+ L G+V E K L MIE D +TY ++++ C
Sbjct: 249 NEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMV 308
Query: 374 GRAGEAMKLLKELQNKN----------LIDGYTYT 398
G A +L + +K LI+GY+ T
Sbjct: 309 GDLNSARELFVSMPSKGCEPDVISYNVLINGYSKT 343
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
YN +I +++ K+ A+ ++ M RP++ +Y+ L GK
Sbjct: 333 YNVLINGYSKTLKVEEAMKLYNEMLLVGK---RPNVITYDSLLKGIFLAGKVDDAKKLFS 389
Query: 227 ---------NTYINHVYMETI---RCLFKQMV------NDGIEPDIFSLNSMIKGYILSN 268
N+Y ++++ + CLF+ M + + +I +LN +I G +
Sbjct: 390 VMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAG 449
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ A +F ++ + PN +Y +IHG C +G+ A L +M+ G P +Y
Sbjct: 450 KLETAWELFEKLSN-EGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITY 508
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+ + ++EE V+ L M +K D IT V+D + + + E + LL
Sbjct: 509 NTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPI 568
Query: 389 KNLID 393
+ +D
Sbjct: 569 QKGVD 573
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F M+ P + S N ++ G H + +++QM + + + + L++ LC
Sbjct: 57 FHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRL-SGLSSDRCTLNILLNCLC 115
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
R + + R+G+ P+ +YN+L+ L + + E + M + D +
Sbjct: 116 NVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVV 175
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQN 388
TY T++ +C G A+KL +E+ N
Sbjct: 176 TYGTLIKGLCGTGNINIALKLHQEMLN 202
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,226,728,245
Number of Sequences: 23463169
Number of extensions: 244894852
Number of successful extensions: 673414
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4503
Number of HSP's successfully gapped in prelim test: 4623
Number of HSP's that attempted gapping in prelim test: 587689
Number of HSP's gapped (non-prelim): 44288
length of query: 417
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 272
effective length of database: 8,957,035,862
effective search space: 2436313754464
effective search space used: 2436313754464
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 78 (34.7 bits)