BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014860
(417 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUY1|PP173_ARATH Pentatricopeptide repeat-containing protein At2g27800,
mitochondrial OS=Arabidopsis thaliana GN=At2g27800 PE=2
SV=2
Length = 442
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 213/348 (61%), Positives = 272/348 (78%), Gaps = 1/348 (0%)
Query: 61 YSAIALSRSSSRGVGKRSKADSKPALDDTQFRCAVSELPPRFNNEELCNVMTLQEDPLVC 120
YS +RS R + R K+ +KP L+ ++F +S+LPPRF EEL + +TL+EDP +C
Sbjct: 96 YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LFNWAS+QPRF H+ +YHI RKLGAAKMYQEMDD+VNQ+L+ G E LYN+II
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSV-RHIGNENLYNSII 214
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
++F +A KL RAV +F++M S+NLECRP+IR+Y+ILF A L RG N+YINHVYMET+R
Sbjct: 215 FYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRS 274
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF+QMV+ GIEPD+F+LN ++KGY+LS HVNDALRIFHQM VVY+ PNSF+YDYLIHGL
Sbjct: 275 LFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGL 334
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
CAQGRT NAREL EMK KGFVP+ KSYNSLV+A AL+GE+++ VK LWEMIE R VDF
Sbjct: 335 CAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDF 394
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDF 408
I+YRT++DE CR+G+ EA +LL+ L+ K L+D +Y KL++VL D
Sbjct: 395 ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKDL 442
>sp|Q9LSF5|PP254_ARATH Pentatricopeptide repeat-containing protein At3g25210,
mitochondrial OS=Arabidopsis thaliana GN=At3g25210 PE=2
SV=1
Length = 379
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 176/317 (55%), Gaps = 6/317 (1%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKL 147
+TQF + L P F N ++ + Q DP + L++F W ++Q ++H+ YH M ++
Sbjct: 59 ETQFETWIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQA 118
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKL-SRAVYVFKYMKNSRNLE 206
K ++ ++ +++A LYN II F + L +RA V Y K R+ +
Sbjct: 119 ITGKRNNFVETLIEEVIAGACEMSV-PLYNCIIRFCCGRKFLFNRAFDV--YNKMLRSDD 175
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
+P + +Y +L ++ L R + +VY+ +R L KQM ++G+ PD F LN +IK Y
Sbjct: 176 SKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAK 235
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V++A+R+F +M + Y PN+++Y YL+ G+C +GR EM+ KG VP+
Sbjct: 236 CLEVDEAIRVFKEMAL-YGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGS 294
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
Y L+ +L++ ++E V+ +++M+ D +TY TVL E+CR GR EA+++++E
Sbjct: 295 CYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEW 354
Query: 387 QNKNLIDG-YTYTKLLD 402
+ ++ + G Y L+D
Sbjct: 355 KKRDPVMGERNYRTLMD 371
>sp|Q8LDU5|PP298_ARATH Pentatricopeptide repeat-containing protein At4g01400,
mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2
SV=2
Length = 466
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 143/274 (52%), Gaps = 14/274 (5%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q DPL+ E+F++AS+QP FRH S++ I+ KLG + + +DDV+ + ++ + T
Sbjct: 61 QSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSS-GYPLTG 119
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS-RGKNTYINH 232
++ +I +AEA+ + + F M P + N + +S RG
Sbjct: 120 EIFTYLIKVYAEAKLPEKVLSTFYKM---LEFNFTPQPKHLNRILDVLVSHRG------- 169
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
Y++ LFK G+ P+ S N +++ + L++ ++ A ++F +M + + +P+ S
Sbjct: 170 -YLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM-LERDVVPDVDS 227
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI G C +G+ A EL D+M KGFVP SY +L+++L ++ E K L M
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
K D + Y T++ CR RA +A K+L ++
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 78/147 (53%), Gaps = 3/147 (2%)
Query: 260 MIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA-QGRTKNARELCDEMKR 318
+IK Y + L F++M + +N+ P + ++ L + +G + A EL +
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKM-LEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRL 183
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
G +P+++SYN L+ A LN ++ + +M+E+ D +Y+ ++ CR+G+
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNG 243
Query: 379 AMKLLKELQNKNLI-DGYTYTKLLDVL 404
AM+LL ++ NK + D +YT LL+ L
Sbjct: 244 AMELLDDMLNKGFVPDRLSYTTLLNSL 270
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 153/337 (45%), Gaps = 41/337 (12%)
Query: 98 LPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD 157
P + + + ++ +++P LF+ A++ P + H A YH + R+L +M +
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVS 63
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
+V + + C E + ++I + + +A+ VFK M+ C P+IRSYN L
Sbjct: 64 RIVELIRSQECKC-DEDVALSVIKTYGKNSMPDQALDVFKRMREI--FGCEPAIRSYNTL 120
Query: 218 FTAFLSRGKNTYINHVY---------------------------METIRCLFKQMVNDGI 250
AF+ + + ++ E R M +G
Sbjct: 121 LNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGF 180
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTK 307
+PD+FS +++I + ++DAL +F +M GV P+ Y+ LI G + K
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA----PDVTCYNILIDGFLKEKDHK 236
Query: 308 NARELCDEMKRKGFV-PSSKSYNSLVSALALNGEVEETVKNLWE-MIEKQRPVDFITYRT 365
A EL D + V P+ K++N ++S L+ G V++ +K +WE M + +R D TY +
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK-IWERMKQNEREKDLYTYSS 295
Query: 366 VLDEICRRGRAGEAMKLLKEL-QNKNLIDGYTYTKLL 401
++ +C G +A + EL + K ID TY +L
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTML 332
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 20/285 (7%)
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTI 179
CL+++ KQ D TY + L A + + V N++ + YNT+
Sbjct: 274 CLKIWE-RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDV-VTYNTM 331
Query: 180 IYFFAEARKLSRAVYVFKYM--KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
+ F K+ ++ +++ M KNS N I SYNIL L GK I+ M
Sbjct: 332 LGGFCRCGKIKESLELWRIMEHKNSVN------IVSYNILIKGLLENGK---IDEATM-- 380
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+++ M G D + I G ++ +VN AL + ++ +L + ++Y +I
Sbjct: 381 ---IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL-DVYAYASII 436
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
LC + R + A L EM + G +S N+L+ L + + E L EM +
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCR 496
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKE-LQNKNLIDGYTYTKLL 401
++Y ++ +C+ G+ GEA +KE L+N D TY+ LL
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 117/266 (43%), Gaps = 14/266 (5%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LELF+ S++ D + Y+I+ K ++ ++ +++L S +N +I
Sbjct: 204 LELFDEMSERG-VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
++ ++ + +++ MK + E + +Y+ L G ++
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQN---EREKDLYTYSSLIHGLCDAGN--------VDKAES 311
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F ++ D+ + N+M+ G+ + ++L ++ M + N SY+ LI GL
Sbjct: 312 VFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME--HKNSVNIVSYNILIKGL 369
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
G+ A + M KG+ +Y + L +NG V + + + E+ +D
Sbjct: 370 LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDV 429
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKEL 386
Y +++D +C++ R EA L+KE+
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKEM 455
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 15/227 (6%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYM-KNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
N +I +L A + + M KN CRP++ SYNIL GK
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNG----CRPTVVSYNILICGLCKAGK--------F 515
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
K+M+ +G +PD+ + + ++ G ++ AL ++HQ + + ++
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF-LQSGLETDVMMHNI 574
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGLC+ G+ +A + M+ + + +YN+L+ G+ M +
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
D I+Y T++ +C AM+ + +N + YT+ L+
Sbjct: 635 LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 3/146 (2%)
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
S+IK Y ++ + AL +F +M ++ P SY+ L++ + L +
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNL-WEMIEKQRPVDFITYRTVLDEICRRGRAG 377
G P+ ++YN L+ E E+ L W E +P D +Y TV++++ + G+
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKP-DVFSYSTVINDLAKAGKLD 201
Query: 378 EAMKLLKELQNKNLIDGYT-YTKLLD 402
+A++L E+ + + T Y L+D
Sbjct: 202 DALELFDEMSERGVAPDVTCYNILID 227
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 46/339 (13%)
Query: 98 LPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMD 157
+ P + + V+ Q+DP+ LE+FN K+ F+H STY + KLG ++ M+
Sbjct: 1 MGPPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAME 60
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
+V+ M E +Y + + K+ AV VF+ M +C P++ SYN +
Sbjct: 61 EVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDF---YDCEPTVFSYNAI 117
Query: 218 FTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+ + G + VYM +M + GI PD++S +K + ++ + ALR+
Sbjct: 118 MSVLVDSGYFDQAHKVYM--------RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169
Query: 278 HQMG-------------VVYNYLPNSF---------------------SYDYLIHGLCAQ 303
+ M VV + +F +++ L+ LC +
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
G K +L D++ ++G +P+ +YN + L GE++ V+ + +IE+ D ITY
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++ +C+ + EA L ++ N+ L D YTY L+
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 14/268 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D+ TY+ + M Q + +V + F + Y ++I + +RA+ +
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFN-GFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F + +P++ YN L ++G + +E + L +M G+ P++
Sbjct: 379 FN---EALGKGIKPNVILYNTLIKGLSNQG-------MILEAAQ-LANEMSEKGLIPEVQ 427
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N ++ G V+DA + M + Y P+ F+++ LIHG Q + +NA E+ D
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVM-ISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M G P +YNSL++ L + E+ ++ M+EK + T+ +L+ +CR +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 376 AGEAMKLLKELQNKNL-IDGYTYTKLLD 402
EA+ LL+E++NK++ D T+ L+D
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLID 574
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
LYNT+I + + A + M + P ++++NIL G
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLI---PEVQTFNILVNGLCKMG--------C 441
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSF 291
+ L K M++ G PDIF+ N +I GY + +AL I M GV P+ +
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD----PDVY 497
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y+ L++GLC + ++ E M KG P+ ++N L+ +L +++E + L EM
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
K D +T+ T++D C+ G A L ++++
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +YN+ RG+ V M + CL +Q G +PD+ + N++I G ++
Sbjct: 249 PNLFTYNLFIQGLCQRGELD--GAVRM--VGCLIEQ----GPKPDVITYNNLIYGLCKNS 300
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+A +M V P+S++Y+ LI G C G + A + + GFVP +Y
Sbjct: 301 KFQEAEVYLGKM-VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
SL+ L GE + E + K + I Y T++ + +G EA +L E+
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 389 KNLI 392
K LI
Sbjct: 420 KGLI 423
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +++ G+ P++F+ N I+G ++ A+R+ + + P+ +Y+ LI+GL
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL-IEQGPKPDVITYNNLIYGL 296
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C + + A +M +G P S +YN+L++ G V+ + + + + D
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
TYR+++D +C G A+ L E K +
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 104/266 (39%), Gaps = 50/266 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+++ + K + +K M C P++ ++NIL + K +
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKG---CAPNLFTFNILLESLCRYRK--------L 547
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---------GVVYNY 286
+ L ++M N + PD + ++I G+ + ++ A +F +M YN
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNI 607
Query: 287 L--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+ P+ ++Y ++ G C G + EM G
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
F+PS + +++ L + V E + M++K + + T+ D + ++ A +
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN--TICD-VDKKEVAAPKL 724
Query: 381 KLLKELQNKNLIDGYTYTKLLDVLED 406
+L++L K+ I Y Y L D L D
Sbjct: 725 -VLEDLLKKSCITYYAYELLFDGLRD 749
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 109/218 (50%), Gaps = 12/218 (5%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+Y T+I F + R RA F Y +SR++ P + +Y + + F G
Sbjct: 352 VVYTTLIDGFCK-RGDIRAASKFFYEMHSRDIT--PDVLTYTAIISGFCQIGD------- 401
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
M LF +M G+EPD + +I GY + H+ DA R+ + M + PN +Y
Sbjct: 402 -MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTY 459
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
LI GLC +G +A EL EM + G P+ +YNS+V+ L +G +EE VK + E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D +TY T++D C+ G +A ++LKE+ K L
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 29/258 (11%)
Query: 149 AAKMYQEMDDVVNQMLATPSFC-GTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
A K++ EM FC G E + +I + +A + A V +M +
Sbjct: 405 AGKLFHEM------------FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-- 450
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
C P++ +Y L G +++ L +M G++P+IF+ NS++ G
Sbjct: 451 -GCSPNVVTYTTLIDGLCKEGD--------LDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 265 ILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPS 324
S ++ +A+++ + ++ +Y L+ C G A+E+ EM KG P+
Sbjct: 502 CKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 325 SKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLK 384
++N L++ L+G +E+ K L M+ K + T+ +++ + C R A + K
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 385 ELQNKNL-IDGYTYTKLL 401
++ ++ + DG TY L+
Sbjct: 621 DMCSRGVGPDGKTYENLV 638
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 10/194 (5%)
Query: 210 SIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH 269
++ SYNI+ G+ +H+ + M G PD+ S ++++ GY
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLL--------LMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
++ ++ M PNS+ Y +I LC + A E EM R+G +P + Y
Sbjct: 297 LDKVWKLIEVMKR-KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
+L+ G++ K +EM + D +TY ++ C+ G EA KL E+ K
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 390 NL-IDGYTYTKLLD 402
L D T+T+L++
Sbjct: 416 GLEPDSVTFTELIN 429
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 162/395 (41%), Gaps = 54/395 (13%)
Query: 51 LSSNAILCSCYSAIALSRSSSRGVGKRSKADSKPALD---------DTQFRCAVS----- 96
L L S + I L SRG+ + D++P D DT+F ++
Sbjct: 9 LMKRGTLSSFRNFIQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKL 68
Query: 97 --------ELPP---RFNNEELCNV-MTLQEDPLVCLELFNWASKQPRFRHDAS--TYHI 142
L P +F + L V M ++ D + L+ F+WA R R D++ + I
Sbjct: 69 RRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWA----RSRRDSNLESLCI 124
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL---YNTIIYFFAEARKLSRAVYVFKYM 199
+ A+K + +++ P T++ ++ ++Y + + R VF +
Sbjct: 125 VIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQV 184
Query: 200 KNSRNLECRPSIRSYNILFTAFLSRGK-------NTYINHVYME-----TIRCLFKQMVN 247
L +R +F L+ G N Y+ + + T +F++
Sbjct: 185 LVDFGL-----LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE 239
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
G+ ++ S N +I + +A + M + Y P+ SY +++G C G
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL-KGYTPDVISYSTVVNGYCRFGELD 298
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+L + MKRKG P+S Y S++ L ++ E + EMI + D + Y T++
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 368 DEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D C+RG A K E+ ++++ D TYT ++
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 23/255 (9%)
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
C A YN +I+F + ++ A ++ M+ P + SY+ + + G+
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY---TPDVISYSTVVNGYCRFGE--- 296
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
++ + L + M G++P+ + S+I + +A F +M + LP+
Sbjct: 297 -----LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM-IRQGILPD 350
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
+ Y LI G C +G + A + EM + P +Y +++S G++ E K
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMK----LLKELQNKNLIDGYTYTKLLDVL- 404
EM K D +T+ +++ C+ G +A + +++ + N++ TYT L+D L
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV---TYTTLIDGLC 467
Query: 405 ---EDDFGNSIRHHL 416
+ D N + H +
Sbjct: 468 KEGDLDSANELLHEM 482
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 93/216 (43%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN+I+ ++ + AV K + +Y L A+ G+ M
Sbjct: 494 YNSIVNGLCKSGNIEEAV---KLVGEFEAAGLNADTVTYTTLMDAYCKSGE--------M 542
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + K+M+ G++P I + N ++ G+ L + D ++ + M + PN+ +++
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM-LAKGIAPNATTFNS 601
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
L+ C + K A + +M +G P K+Y +LV ++E EM K
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
V TY ++ +R + EA ++ +++ + L
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
>sp|Q84VG6|PP160_ARATH Pentatricopeptide repeat-containing protein At2g17525,
mitochondrial OS=Arabidopsis thaliana GN=At2g17525 PE=2
SV=2
Length = 626
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 18/271 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
LE F WAS P F H STY + KL + + + ++++M + +A++ TII
Sbjct: 60 LETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTII 119
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
F AR + R + V + +PS++ +N + + ++ R
Sbjct: 120 RGFGRARLIKRVISVVDLVS---KFGIKPSLKVFNSILDVLVKED---------IDIARE 167
Query: 241 LF-KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
F ++M+ GI D+++ ++KG L+N + D ++ M PN+ Y+ L+H
Sbjct: 168 FFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMK-TSGVAPNAVVYNTLLHA 226
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD 359
LC G+ AR L EMK P+ ++N L+SA ++ +++ L + D
Sbjct: 227 LCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPD 282
Query: 360 FITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
+T V++ +C GR EA+++L+ +++K
Sbjct: 283 VVTVTKVMEVLCNEGRVSEALEVLERVESKG 313
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 128/282 (45%), Gaps = 17/282 (6%)
Query: 113 LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT 172
++ED + E F D TY I+ + L + ++ Q++ T
Sbjct: 158 VKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLL-QIMKTSGVAPN 216
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
+YNT+++ + K+ RA + MK P+ ++NIL +A Y N
Sbjct: 217 AVVYNTLLHALCKNGKVGRARSLMSEMKE-------PNDVTFNILISA--------YCNE 261
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ L ++ + G PD+ ++ +++ V++AL + ++ + + +
Sbjct: 262 QKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKV-DVVA 320
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ L+ G CA G+ + A+ EM+RKG++P+ ++YN L++ G ++ + +M
Sbjct: 321 CNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMK 380
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
+F T+ T++ + GR + +K+L+ +Q+ + + G
Sbjct: 381 TDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHG 422
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 16/235 (6%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA-LYNTI 179
L+ FN K R + +T++ + R L + ++ M + + G YN +
Sbjct: 373 LDTFN-DMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCV 431
Query: 180 IYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR 239
IY F + + A+ +++ L R RS+ ++ + +G M+ ++
Sbjct: 432 IYGFYKENRWEDAL---EFLLKMEKLFPRAVDRSFKLI--SLCEKGG--------MDDLK 478
Query: 240 CLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHG 299
+ QM+ +G P I + +I Y + ++L + + M V YLP S +++ +I G
Sbjct: 479 TAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDM-VTRGYLPRSSTFNAVIIG 537
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
C Q + N + ++M +G VP ++SYN L+ L + G++++ M+EK
Sbjct: 538 FCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEK 592
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 107/263 (40%), Gaps = 46/263 (17%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
NT++ + K+ A F M+ L P++ +YN+L + G ++
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYL---PNVETYNLLIAGYCDVG--------MLD 370
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------------- 281
+ F M D I + + N++I+G + +D L+I M
Sbjct: 371 SALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNC 430
Query: 282 VVYNY-------------------LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
V+Y + P + + + LC +G + + D+M +G V
Sbjct: 431 VIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGV 490
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
PS + L+ + +G++EE+++ + +M+ + T+ V+ C++ + +K
Sbjct: 491 PSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKF 550
Query: 383 LKELQNKNLI-DGYTYTKLLDVL 404
++++ + + D +Y LL+ L
Sbjct: 551 VEDMAERGCVPDTESYNPLLEEL 573
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 113/258 (43%), Gaps = 15/258 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+ TY+++ M D N M T + A +NT+I + + + +
Sbjct: 352 NVETYNLLIAGYCDVGMLDSALDTFNDM-KTDAIRWNFATFNTLIRGLSIGGRTDDGLKI 410
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV-YMETIRCLFKQMVNDGIEPDI 254
+ M++S + I YN + F +N + + + ++ + LF + V+
Sbjct: 411 LEMMQDSDTVH-GARIDPYNCVIYGFYK--ENRWEDALEFLLKMEKLFPRAVDRS----- 462
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
F L S+ + ++D + QM + +P+ LIH G+ + + EL +
Sbjct: 463 FKLISLCE----KGGMDDLKTAYDQM-IGEGGVPSIIVSHCLIHRYSQHGKIEESLELIN 517
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
+M +G++P S ++N+++ +V +K + +M E+ D +Y +L+E+C +G
Sbjct: 518 DMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKG 577
Query: 375 RAGEAMKLLKELQNKNLI 392
+A L + K+++
Sbjct: 578 DIQKAWLLFSRMVEKSIV 595
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
Y H +E L MV G P + N++I G+ + V + ++ M +P
Sbjct: 503 YSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAE-RGCVP 561
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV------SALALNGEVE 342
++ SY+ L+ LC +G + A L M K VP ++SL+ +A+ +N ++
Sbjct: 562 DTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQ 621
Query: 343 ETVKN 347
+ +++
Sbjct: 622 DIIQS 626
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 137/296 (46%), Gaps = 34/296 (11%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
++ L+EDP + + F W+ + F+H +Y I+ L A+MY + + V+ +M+ + +
Sbjct: 115 LVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKAD 174
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
C VF + ++RN+ C P ++ LF+ + G
Sbjct: 175 CD-----------------------VFDVLWSTRNV-CVPGFGVFDALFSVLIDLG---- 206
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+ E I+C F +M + P S N ++ + +D R F M + P
Sbjct: 207 ---MLEEAIQC-FSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM-IGAGARPT 261
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
F+Y+ +I +C +G + AR L +EMK +G VP + +YNS++ G +++TV
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
EM + D ITY +++ C+ G+ ++ +E++ L + +Y+ L+D
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 125/322 (38%), Gaps = 49/322 (15%)
Query: 129 KQPRFRH---DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL--YNTIIYFF 183
++ +FR D TY+ M G +DD V C + YN +I F
Sbjct: 286 EEMKFRGLVPDTVTYNSMIDGFGKVG---RLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 184 AEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC--- 240
+ KL + ++ MK + +P++ SY+ L AF G Y++ R
Sbjct: 343 CKFGKLPIGLEFYREMKGNG---LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 241 ------------------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
L +M+ G+E ++ + ++I G + + +A +
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
F +M +PN SY+ LIHG A EL +E+K +G P Y + + L
Sbjct: 460 FGKMDTA-GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN------ 390
++E + EM E + + Y T++D + G E + LL E++ +
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 391 ----LIDGYTYTKLLDVLEDDF 408
LIDG KL+ D F
Sbjct: 579 TFCVLIDGLCKNKLVSKAVDYF 600
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLI 297
LF +M G+ P++ S N++I G++ + +++ AL + +++ G+ P+ Y I
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIK----PDLLLYGTFI 514
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
GLC+ + + A+ + +EMK G +S Y +L+ A +G E + L EM E
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
V +T+ ++D +C+ +A+ + N
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 15/219 (6%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRS--YNILFTAFLSRGKNTYINH 232
LY T I+ K+ A V MK EC S Y L A+ G T H
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMK-----ECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
L +M IE + + +I G + V+ A+ F+++ + N+
Sbjct: 564 --------LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
+ +I GLC + + A L ++M +KG VP +Y SL+ G V E + +M
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMA 675
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
E +D + Y +++ + + +A L+E+ + +
Sbjct: 676 EIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 115/276 (41%), Gaps = 21/276 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA---LYN 177
LEL N K + D Y L + + + V+N+M CG +A +Y
Sbjct: 492 LELLN-ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE----CGIKANSLIYT 546
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T++ + ++ + +++ MK L+ ++ ++ +L KN ++
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKE---LDIEVTVVTFCVLIDGLC---KNKLVSKAVD-- 598
Query: 238 IRCLFKQMVND-GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
F ++ ND G++ + +MI G N V A +F QM V +P+ +Y L
Sbjct: 599 ---YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM-VQKGLVPDRTAYTSL 654
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ G QG A L D+M G +Y SLV L+ ++++ L EMI +
Sbjct: 655 MDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
D + +VL + G EA++L L L+
Sbjct: 715 HPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750
>sp|Q9ZUU3|PP190_ARATH Pentatricopeptide repeat-containing protein At2g37230
OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1
Length = 757
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 145/315 (46%), Gaps = 15/315 (4%)
Query: 89 TQFRCAVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLG 148
T+ + ++ +L P +++ + NV+ + L+ F W + RHD T+ M + LG
Sbjct: 102 TRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLG 161
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
++ M E ++ +I + +A + +V +F+ MK+ L
Sbjct: 162 EVSKLNHARCILLDM-PEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKD---LGVE 217
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
+I+SYN LF L RG+ YM R F +MV++G+EP + N M+ G+ LS
Sbjct: 218 RTIKSYNSLFKVILRRGR-------YMMAKR-YFNKMVSEGVEPTRHTYNLMLWGFFLSL 269
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ ALR F M P+ +++ +I+G C + A +L EMK PS SY
Sbjct: 270 RLETALRFFEDMKT-RGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSY 328
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+++ V++ ++ EM + TY T+L +C G+ EA +LK +
Sbjct: 329 TTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMA 388
Query: 389 KNLI--DGYTYTKLL 401
K++ D + KLL
Sbjct: 389 KHIAPKDNSIFLKLL 403
Score = 39.3 bits (90), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 115/284 (40%), Gaps = 23/284 (8%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
+D L E + +P +A+TY + L A E +++ M+A +
Sbjct: 342 DDGLRIFEEMRSSGIEP----NATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNS 397
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
++ ++ ++A ++ A V K M L Y +L +N Y
Sbjct: 398 IFLKLLVSQSKAGDMAAATEVLKAMAT---LNVPAEAGHYGVLI-------ENQCKASAY 447
Query: 235 METIRCL----FKQMV---NDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
I+ L K+++ D +E + + N +I+ + A +F Q+ + +
Sbjct: 448 NRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQL--MKRGV 505
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
+ + + LI G +G ++ E+ M R+G S +Y L+ + GE +
Sbjct: 506 QDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTA 565
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
L M+E D +R+V++ + GR A +++ + +KN+
Sbjct: 566 LDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNV 609
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 114/219 (52%), Gaps = 12/219 (5%)
Query: 168 SFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKN 227
C E Y T++ F++ ++ A V + M ++ PS+ +YN L GK
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG---FSPSVVTYNALINGHCVTGK- 430
Query: 228 TYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL 287
ME + + M G+ PD+ S ++++ G+ S V++ALR+ +M V
Sbjct: 431 -------MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM-VEKGIK 482
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKN 347
P++ +Y LI G C Q RTK A +L +EM R G P +Y +L++A + G++E+ ++
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 348 LWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
EM+EK D +TY +++ + ++ R EA +LL +L
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 149/322 (46%), Gaps = 29/322 (9%)
Query: 98 LPPRFNNEELCNVM-TLQEDPLVCLELFNWASKQPRF--RHDASTYHIMTR-KL-GAAKM 152
L F E N++ Q D + L+ NWA+ F R T HI+T+ KL A++
Sbjct: 42 LSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQI 101
Query: 153 YQE------MDD-----VVNQMLATPSFC-GTEALYNTIIYFFAEARKLSRAVYVFKYMK 200
E +DD V + T C T ++++ ++ ++ + +A+ + +
Sbjct: 102 LAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQ 161
Query: 201 NSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSM 260
+ P + SYN + A + +N + E + FK+M+ + P++F+ N +
Sbjct: 162 AHGFM---PGVLSYNAVLDATIRSKRNIS----FAENV---FKEMLESQVSPNVFTYNIL 211
Query: 261 IKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
I+G+ + +++ AL +F +M LPN +Y+ LI G C + + +L M KG
Sbjct: 212 IRGFCFAGNIDVALTLFDKMET-KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+ SYN +++ L G ++E L EM + +D +TY T++ C+ G +A+
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 381 KLLKELQNKNLIDGY-TYTKLL 401
+ E+ L TYT L+
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLI 352
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 110/227 (48%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I + + RK+ FK +++ P++ SYN++ G+ M
Sbjct: 243 YNTLIDGYCKLRKIDDG---FKLLRSMALKGLEPNLISYNVVINGLCREGR--------M 291
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + + +M G D + N++IKGY + + AL + H + + P+ +Y
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEMLRHGLTPSVITYTS 350
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIH +C G A E D+M+ +G P+ ++Y +LV + G + E + L EM +
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+TY +++ C G+ +A+ +L++++ K L D +Y+ +L
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 27/226 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+T++ F + + A+ V + M +P +Y+ L F + + +Y
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKG---IKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +R G+ PD F+ ++I Y + + AL++ ++M V LP+ +Y
Sbjct: 510 EMLRV--------GLPPDEFTYTALINAYCMEGDLEKALQLHNEM-VEKGVLPDVVTYSV 560
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN---------------SLVSALALNGE 340
LI+GL Q RT+ A+ L ++ + VPS +Y+ SL+ + G
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ E + M+ K D Y ++ CR G +A L KE+
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+ D TY + + + +E D+ +ML E Y +I + L +A
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDLEKA 539
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ + M L P + +Y++L + + E R L K + +
Sbjct: 540 LQLHNEMVEKGVL---PDVVTYSVLINGLNKQSRTR-------EAKRLLLKLFYEESVPS 589
Query: 253 DIF--------------SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIH 298
D+ S+ S+IKG+ + + +A ++F M + N+ P+ +Y+ +IH
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM-LGKNHKPDGTAYNIMIH 648
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEE 343
G C G + A L EM + GF+ + + +LV AL G+V E
Sbjct: 649 GHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 90/217 (41%), Gaps = 25/217 (11%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+++I F E R+ A +++ M + P +Y L A+ G +
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEM---LRVGLPPDEFTYTALINAYCMEGD--------L 536
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA----LRIFHQMGV-----VYNY 286
E L +MV G+ PD+ + + +I G + +A L++F++ V +
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 287 LPNSFSYDY-----LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
+ N + ++ LI G C +G A ++ + M K P +YN ++ G++
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 656
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+ EM++ + +T ++ + + G+ E
Sbjct: 657 RKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 127/253 (50%), Gaps = 15/253 (5%)
Query: 153 YQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
Y+ +DD +N + + T Y+++I + S A + M + P+
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---INPN 329
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ ++N L AF+ GK ++E + L+ M+ I+PDIF+ NS++ G+ + + +
Sbjct: 330 LVTFNALIDAFVKEGK-------FVEAEK-LYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ A ++F M V + P+ +Y+ LI G C R ++ EL EM +G V + +Y +
Sbjct: 382 DKAKQMFEFM-VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ L +G+ + K +M+ P D +TY +LD +C G+ +A+++ +Q
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 391 L-IDGYTYTKLLD 402
+ +D Y YT +++
Sbjct: 501 IKLDIYIYTTMIE 513
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A+ +K + + + M+ LE + +YNIL F R + +
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQR---LEIVHGLYTYNILINCFCRRSQ--------I 136
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M+ G EP I +L+S++ GY ++DA+ + QM V Y P++ ++
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTT 195
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL + A L D M ++G P+ +Y +V+ L G+ + + L +M +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D + + T++D +C+ +A+ L KE++ K + + TY+ L+ L
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 129/286 (45%), Gaps = 40/286 (13%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+Y DD++ + + F YN+++ F +L +A +F++M + +C
Sbjct: 349 AEKLY---DDMIKRSIDPDIFT-----YNSLVNGFCMHDRLDKAKQMFEFMVSK---DCF 397
Query: 209 PSIRSYNILFTAF-----LSRGKNTY--INH--------VYMETIRCLF----------- 242
P + +YN L F + G + ++H Y I+ LF
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 243 -KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
KQMV+DG+ PDI + + ++ G + + AL +F M L + + Y +I G+C
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL-DIYIYTTMIEGMC 516
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G+ + +L + KG P+ +YN+++S L ++E L +M E +
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
TY T++ R G + +L++E+++ + D T + ++L D
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD 622
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 48/263 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F ++S A+ + M L PSI + + L N Y + +
Sbjct: 123 YNILINCFCRRSQISLALALLGKM---MKLGYEPSIVTLSSLL--------NGYCHGKRI 171
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L QMV G PD + ++I G L N ++A+ + +M V PN +Y
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGV 230
Query: 296 LIHGLCAQGRTK-----------------------------------NARELCDEMKRKG 320
+++GLC +G T +A L EM+ KG
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+ +Y+SL+S L G + + L +MIEK+ + +T+ ++D + G+ EA
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 381 KLLKELQNKNL-IDGYTYTKLLD 402
KL ++ +++ D +TY L++
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVN 373
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYN 329
++DA+ +F M V LP+ ++ L+ + + L ++M+R V +YN
Sbjct: 66 LDDAIGLFGGM-VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 330 SLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK 389
L++ ++ + L +M++ +T ++L+ C R +A+ L+ ++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 390 NL-IDGYTYTKLL 401
D T+T L+
Sbjct: 185 GYRPDTITFTTLI 197
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 117/227 (51%), Gaps = 13/227 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F + ++ A V M R+ + P +YNI+ + SRGK +
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRM---RSKDFSPDTVTYNIMIGSLCSRGK--------L 209
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ + Q+++D +P + + +I+ +L V++AL++ +M + P+ F+Y+
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYNT 268
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C +G A E+ ++ KG P SYN L+ AL G+ EE K + +M ++
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ +TY ++ +CR G+ EAM LLK ++ K L D Y+Y L+
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 36/268 (13%)
Query: 148 GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC 207
G + + MD+++++ L F YNTII + + RA F+ ++N C
Sbjct: 243 GVDEALKLMDEMLSRGLKPDMFT-----YNTIIRGMCKEGMVDRA---FEMVRNLELKGC 294
Query: 208 RPSIRSYNILFTAFLSRGK-----------------NTYINHVYMETIRC---------- 240
P + SYNIL A L++GK + + + T C
Sbjct: 295 EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L K M G+ PD +S + +I + ++ A+ M + LP+ +Y+ ++ L
Sbjct: 355 LLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM-ISDGCLPDIVNYNTVLATL 413
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G+ A E+ ++ G P+S SYN++ SAL +G+ + + EM+ D
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQN 388
ITY +++ +CR G EA +LL ++++
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRS 501
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 48/275 (17%)
Query: 148 GAAKMYQEMDDVVNQM--LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
G KM +DD + + + F YN +I KL A+ V + +
Sbjct: 167 GFCKM-NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN-- 223
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
C+P++ +Y IL A + G ++ L +M++ G++PD+F+ N++I+G
Sbjct: 224 -CQPTVITYTILIEATMLEGG--------VDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 266 LSNHVNDALRIFHQMG--------VVYNYL--------------------------PNSF 291
V+ A + + + YN L PN
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y LI LC G+ + A L MK KG P + SY+ L++A G ++ ++ L M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
I D + Y TVL +C+ G+A +A+++ +L
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 16/269 (5%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEARKLSRAVY 194
D +Y+I+ R L ++E + ++ +M + C + Y+ +I K+ A+
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEK--CDPNVVTYSILITTLCRDGKIEEAMN 354
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+ K MK P SY+ L AF G+ ++ + M++DG PDI
Sbjct: 355 LLKLMKEKG---LTPDAYSYDPLIAAFCREGR--------LDVAIEFLETMISDGCLPDI 403
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ N+++ + + AL IF ++G V PNS SY+ + L + G A +
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM G P +YNS++S L G V+E + L +M + +TY VL C+
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 375 RAGEAMKLLKEL-QNKNLIDGYTYTKLLD 402
R +A+ +L+ + N + TYT L++
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIE 551
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 6/170 (3%)
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY-LPNSFS 292
Y+E++ L + MV G PD+ +IKG+ ++ A+R+ M ++ + P+ F+
Sbjct: 105 YIESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV---MEILEKFGQPDVFA 160
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y+ LI+G C R +A + D M+ K F P + +YN ++ +L G+++ +K L +++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
ITY +++ G EA+KL+ E+ ++ L D +TY ++
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
>sp|Q9MAG8|PPR79_ARATH Putative pentatricopeptide repeat-containing protein At1g53330
OS=Arabidopsis thaliana GN=At1g53330 PE=3 SV=1
Length = 471
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 147/303 (48%), Gaps = 20/303 (6%)
Query: 107 LCNVMTLQEDPLVCLELF---NWASKQPR--FRHDASTYHIMTRKLGAAKMYQEMDDVVN 161
L +++ + DP ++LF + S P+ FR+ Y I+ KLG +KM+ E+D V+
Sbjct: 12 LASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLL 71
Query: 162 QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+ TE ++ +I FF + SRA+++F M R C+ +++S N L +A
Sbjct: 72 HLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYR---CQRTVKSLNSLLSAL 128
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG 281
L G+ +E ++ + G +PD + N +I G S +DAL++F +M
Sbjct: 129 LKCGE--------LEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEM- 178
Query: 282 VVYNYLPNSFSYDYLIHGLCAQGRTKNARELC-DEMKRKGFVPSSKSYNSLVSALALNGE 340
V P ++ LIHGLC R K A ++ D +K G P+ Y SL+ AL GE
Sbjct: 179 VKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGE 238
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
+ K E E + VD Y T++ + + GR+ E +L+E+ K D TY
Sbjct: 239 LSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNV 298
Query: 400 LLD 402
L++
Sbjct: 299 LIN 301
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 16/262 (6%)
Query: 134 RHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAV 193
+ DA TY+I+ + + + + ++M+ T + T+I+ + ++ A+
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKK-KVKPTGVTFGTLIHGLCKDSRVKEAL 207
Query: 194 YVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
+ M + RP++ Y L A G+ ++ + E K ++
Sbjct: 208 KMKHDMLKVYGV--RPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIK------VDAA 259
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELC 313
I+S ++I I + N+ I +M P++ +Y+ LI+G C + +++A +
Sbjct: 260 IYS--TLISSLIKAGRSNEVSMILEEMSE-KGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
DEM KG P SYN ++ + EE +M + D ++YR V D +C
Sbjct: 317 DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG 376
Query: 374 GRAGEAMKLLKELQNKNLIDGY 395
+ EA +L E+ L GY
Sbjct: 377 LQFEEAAVILDEM----LFKGY 394
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 12/169 (7%)
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
A+Y+T+I +A + + + + M C+P +YN+L F + N V
Sbjct: 259 AIYSTLISSLIKAGRSNEVSMILEEMSEKG---CKPDTVTYNVLINGFCVENDSESANRV 315
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+MV G++PD+ S N ++ + +A +F M P++ SY
Sbjct: 316 --------LDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPR-RGCSPDTLSY 366
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+ GLC + + A + DEM KG+ P + L +G++E
Sbjct: 367 RIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLE 415
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 150/352 (42%), Gaps = 62/352 (17%)
Query: 114 QEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTE 173
Q D L LFN ASK+P F + + Y + +LG + + +M ++ M ++ GT
Sbjct: 60 QPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGT- 118
Query: 174 ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE--------------------------- 206
+ + +I +A+ + V +M + L+
Sbjct: 119 STFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA 178
Query: 207 ------CRPSIRSYNILFTAF---------------------------LSRGKNTYINHV 233
+P + ++N+L A + YI
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
++ + +QMV G S+N ++ G+ V DAL +M + P+ +++
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ L++GLC G K+A E+ D M ++G+ P +YNS++S L GEV+E V+ L +MI
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ + +TY T++ +C+ + EA +L + L +K ++ D T+ L+ L
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 167 PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK 226
P C +N++I R A+ +F+ M R+ C P +YN+L + S+GK
Sbjct: 398 PDVC----TFNSLIQGLCLTRNHRVAMELFEEM---RSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 227 NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNY 286
++ + KQM G + + N++I G+ +N +A IF +M V +
Sbjct: 451 --------LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV-HGV 501
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
NS +Y+ LI GLC R ++A +L D+M +G P +YNSL++ G++++
Sbjct: 502 SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD 561
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ M D +TY T++ +C+ GR A KLL+ +Q K +
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 21/229 (9%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N I++ F + ++ A+ + M N P ++N L G ++ H
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGF--FPDQYTFNTLVNGLCKAG---HVKHAIE- 316
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
+ M+ +G +PD+++ NS+I G V +A+ + QM + + PN+ +Y+ L
Sbjct: 317 ----IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM-ITRDCSPNTVTYNTL 371
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
I LC + + + A EL + KG +P ++NSL+ L L ++ EM K
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQ----------NKNLIDGY 395
D TY ++D +C +G+ EA+ +LK+++ LIDG+
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 24/289 (8%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YN 177
V +ELF + D TY+++ L + E +++ QM S C + YN
Sbjct: 418 VAMELFE-EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM--ELSGCARSVITYN 474
Query: 178 TIIYFFAEARKLSRAVYVFKYMKN---SRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
T+I F +A K A +F M+ SRN S+ +YN L +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRN-----SV-TYNTLIDGLCKSRR-------- 520
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E L QM+ +G +PD ++ NS++ + + A I M P+ +Y
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM-TSNGCEPDIVTYG 579
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI GLC GR + A +L ++ KG + +YN ++ L + E + EM+E+
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 639
Query: 355 -QRPVDFITYRTVLDEICRRGRA-GEAMKLLKELQNKNLIDGYTYTKLL 401
+ P D ++YR V +C G EA+ L EL K + ++ +L
Sbjct: 640 NEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 14/218 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
++ TY+ + L ++ ++ +++QM+ + YN+++ F + +A +
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK-PDKYTYNSLLTHFCRGGDIKKAADI 562
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+ M ++ C P I +Y L + G+ +E L + + GI
Sbjct: 563 VQAMTSNG---CEPDIVTYGTLISGLCKAGR--------VEVASKLLRSIQMKGINLTPH 611
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC-AQGRTKNARELCD 314
+ N +I+G +A+ +F +M P++ SY + GLC G + A +
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLV 671
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
E+ KGFVP S L L L +EET+ L M+
Sbjct: 672 ELLEKGFVPEFSSLYMLAEGL-LTLSMEETLVKLVNMV 708
>sp|Q9SJN2|PP187_ARATH Pentatricopeptide repeat-containing protein At2g36240
OS=Arabidopsis thaliana GN=At2g36240 PE=2 SV=1
Length = 497
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 146/315 (46%), Gaps = 39/315 (12%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGT--------EA 174
+FNWA+ FRHD ++ M+R L A + ++ +++ + A P C + E
Sbjct: 99 VFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEP 158
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------- 226
++ + I + ARK+ A+ F MK R ++ +P++ YN + ++ G
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMK--RLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 227 -------------------NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
N Y + LF++M G EP++ S N++I+G++ S
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ + +++ ++M + + + + L+ GLC +GR +A L ++ K +PS
Sbjct: 277 GKIEEGVKMAYEM-IELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFD 335
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y SLV L + ++ + E+ +K + FI T+++ + + GR +A ++++
Sbjct: 336 YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMM 395
Query: 388 NKNLI-DGYTYTKLL 401
N ++ D T+ LL
Sbjct: 396 NAGILPDSVTFNLLL 410
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME + L+K+ G P + ++++G S A +M + LP+S +++
Sbjct: 353 MEMMEELWKK----GQTPCFIACTTLVEGLRKSGRTEKASGFMEKM-MNAGILPDSVTFN 407
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ LC+ + +A L KG+ P +Y+ LVS G +E + EM++K
Sbjct: 408 LLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDK 467
Query: 355 QRPVDFITYRTVLDEICRRGR 375
D TY ++D + G+
Sbjct: 468 DMLPDIFTYNRLMDGLSCTGK 488
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 15/283 (5%)
Query: 113 LQEDPL---VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
L E PL +ELF+W Q +RH Y ++ KLGA ++ +D ++ QM
Sbjct: 84 LLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQM-KDEGI 142
Query: 170 CGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTY 229
E+L+ +I+ + +A + + M+N + C P+ +SYN++ +S +
Sbjct: 143 VFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYS--CEPTFKSYNVVLEILVSGNCHKV 200
Query: 230 INHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN 289
+V F M++ I P +F+ ++K + N ++ AL + M + +PN
Sbjct: 201 AANV--------FYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM-TKHGCVPN 251
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
S Y LIH L R A +L +EM G VP ++++N ++ L + E K +
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
M+ + D ITY +++ +C+ GR A L + ++
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV 354
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 137/311 (44%), Gaps = 69/311 (22%)
Query: 156 MDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYN 215
+ D+V P C YN++IY + + + A+ V M RN C+P++ SY
Sbjct: 376 LSDMVTSYGIVPDVC----TYNSLIYGYWKEGLVGLALEVLHDM---RNKGCKPNVYSYT 428
Query: 216 ILFTAFLSRGK----NTYINHVYMETIR-------CL----------------FKQMVND 248
IL F GK +N + + ++ CL F++M
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVV-----YNYLPNSF--------- 291
G +PD+++ NS+I G + + AL + M GVV YN L N+F
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 292 -----------------SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+Y+ LI GLC G AR L ++M R G PS+ S N L++
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-ID 393
L +G VEE V+ EM+ + D +T+ ++++ +CR GR + + + ++LQ + + D
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 394 GYTYTKLLDVL 404
T+ L+ L
Sbjct: 669 TVTFNTLMSWL 679
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N++I E ++ A+++ + M + + + +YN L AFL RG+ +
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVA---NTVTYNTLINAFLRRGE--------I 545
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ R L +MV G D + NS+IKG + V+ A +F +M + + P++ S +
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM-LRDGHAPSNISCNI 604
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+GLC G + A E EM +G P ++NSL++ L G +E+ + ++ +
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
P D +T+ T++ +C+ G +A LL E
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 19/271 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
DA T++ + L E +VN+ML F + Y ++ + ++ A +
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIR-GFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND-GIEPDI 254
F + +P I +N L F++ G+ ++ + + MV GI PD+
Sbjct: 345 FYRIP-------KPEIVIFNTLIHGFVTHGR--------LDDAKAVLSDMVTSYGIVPDV 389
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ NS+I GY V AL + H M PN +SY L+ G C G+ A + +
Sbjct: 390 CTYNSLIYGYWKEGLVGLALEVLHDMRN-KGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
EM G P++ +N L+SA + E V+ EM K D T+ +++ +C
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 375 RAGEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
A+ LL+++ ++ ++ + TY L++
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAF 539
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 137/274 (50%), Gaps = 22/274 (8%)
Query: 136 DASTYHIMT----RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
D TY I+ R G + +D++ ++ TP YN ++ + +L
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRG-CTPDV----VTYNVLVNGICKEGRLDE 292
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ K++ + + C+P++ ++NI+ + S G+ +M+ + L M+ G
Sbjct: 293 AI---KFLNDMPSSGCQPNVITHNIILRSMCSTGR-------WMDAEK-LLADMLRKGFS 341
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P + + N +I + A+ I +M + PNS SY+ L+HG C + + A E
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKM-PQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ M +G P +YN++++AL +G+VE+ V+ L ++ K ITY TV+D +
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 372 RRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ G+ G+A+KLL E++ K+L D TY+ L+ L
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 48/289 (16%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T++I+ R + + + + + ++ ML F + +N +I F L RA+ + +
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M C+P+ SYN L F K M+ ++MV+ G PDI + N
Sbjct: 370 MPQH---GCQPNSLSYNPLLHGFCKEKK--------MDRAIEYLERMVSRGCYPDIVTYN 418
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
+M+ V DA+ I +Q+ P +Y+ +I GL G+T A +L DEM+
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSS-KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVK----------------------NLWEMIEKQR 356
K P + +Y+SLV L+ G+V+E +K L + + R
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 357 PVDFI-------------TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+DF+ +Y +++ + G A EA++LL EL NK L+
Sbjct: 538 AIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
FK+++N P I L F GK + + + G PD+
Sbjct: 122 FKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI--------LEILEGSGAVPDVI 173
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ N MI GY + +N+AL + +M V P+ +Y+ ++ LC G+ K A E+ D
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
M ++ P +Y L+ A + V +K L EM ++ D +TY +++ IC+ GR
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 376 AGEAMKLLKEL 386
EA+K L ++
Sbjct: 290 LDEAIKFLNDM 300
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T+I F K +A + + ++ S + P + +YN++ + + G+ IN+
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAV---PDVITYNVMISGYCKAGE---INNAL--- 192
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ +M + PD+ + N++++ S + A+ + +M + + P+ +Y LI
Sbjct: 193 --SVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM-LQRDCYPDVITYTILI 246
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
C +A +L DEM+ +G P +YN LV+ + G ++E +K L +M
Sbjct: 247 EATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ IT+ +L +C GR +A KLL ++ K
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 112/241 (46%), Gaps = 19/241 (7%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
+LG + ++ +++ A P YN +I + +A +++ A+ V M S
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDV----ITYNVMISGYCKAGEINNALSVLDRMSVS--- 201
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P + +YN + + GK ++ + +M+ PD+ + +I+
Sbjct: 202 ---PDVVTYNTILRSLCDSGK--------LKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+ V A+++ +M P+ +Y+ L++G+C +GR A + ++M G P+
Sbjct: 251 RDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
++N ++ ++ G + K L +M+ K +T+ +++ +CR+G G A+ +L++
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 386 L 386
+
Sbjct: 370 M 370
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
N+ ++ + + + + + M V + +P+ LI G C G+T+ A ++ + ++
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENM-VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILE 164
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
G VP +YN ++S GE+ + L M D +TY T+L +C G+
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLK 221
Query: 378 EAMKLL-KELQNKNLIDGYTYTKLLDVLEDDFG 409
+AM++L + LQ D TYT L++ D G
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 13/192 (6%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ M L ++ +++NQ L++ YNT+I A+A K +A+ +
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQ-LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
M R + +P +Y+ L GK + E F++M GI P+
Sbjct: 472 LDEM---RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-----FERM---GIRPNAV 520
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+ NS++ G S + A+ M + PN SY LI GL +G K A EL +E
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFM-INRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 316 MKRKGFVPSSKS 327
+ KG + S +
Sbjct: 580 LCNKGLMKKSSA 591
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 126/253 (49%), Gaps = 15/253 (5%)
Query: 153 YQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
Y+ +DD +N + + T Y+++I + S A + M + P+
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---INPN 254
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ ++N L AF+ GK ++E + L M+ I+PDIF+ NS+I G+ + + +
Sbjct: 255 LVTFNALIDAFVKEGK-------FVEAEK-LHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+ A ++F M V + P+ +Y+ LI G C R ++ EL EM +G V + +Y +
Sbjct: 307 DKAKQMFEFM-VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ L +G+ + K +M+ P D +TY +LD +C G+ +A+++ +Q
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 391 L-IDGYTYTKLLD 402
+ +D Y YT +++
Sbjct: 426 IKLDIYIYTTMIE 438
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A+ +K + + + M + L ++ +YNIL F R + +
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKM---QRLGISHNLYTYNILINCFCRRSQ--------I 61
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L +M+ G EP I +L+S++ GY ++DA+ + QM V Y P++ ++
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTT 120
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL + A L D M ++G P+ +Y +V+ L G+++ L +M +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
D + + T++D +C+ +A+ L KE++ K + + TY+ L+ L
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 118/259 (45%), Gaps = 32/259 (12%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF-----LSRGKNTY- 229
YN++I F +L +A +F++M + +C P + +YN L F + G +
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSK---DCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 230 -INH--------VYMETIRCLF------------KQMVNDGIEPDIFSLNSMIKGYILSN 268
++H Y I+ LF KQMV+DG+ PDI + + ++ G +
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+ AL +F M L + + Y +I G+C G+ + +L + KG P+ +Y
Sbjct: 410 KLEKALEVFDYMQKSEIKL-DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+++S L ++E L +M E D TY T++ R G + +L++E+++
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Query: 389 KNLI-DGYTYTKLLDVLED 406
+ D T + ++L D
Sbjct: 529 CRFVGDASTIGLVANMLHD 547
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 48/263 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F ++S A+ + M L PSI + + L N Y + +
Sbjct: 48 YNILINCFCRRSQISLALALLGKM---MKLGYEPSIVTLSSLL--------NGYCHGKRI 96
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L QMV G PD + ++I G L N ++A+ + +M V PN +Y
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGV 155
Query: 296 LIHGLCAQG-----------------------------------RTKNARELCDEMKRKG 320
+++GLC +G +A L EM+ KG
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P+ +Y+SL+S L G + + L +MIEK+ + +T+ ++D + G+ EA
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 381 KLLKELQNKNL-IDGYTYTKLLD 402
KL ++ +++ D +TY L++
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLIN 298
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/116 (19%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 287 LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVK 346
LP+ F ++ L+ + + L ++M+R G + +YN L++ ++ +
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 347 NLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
L +M++ +T ++L+ C R +A+ L+ ++ D T+T L+
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 25/318 (7%)
Query: 83 KPALDDTQFRCAVSEL------PPRFNNEELCNVMT---LQEDPLVCLELFNWASKQPRF 133
+P D Q +SEL P + EL + + + L F+W KQ +
Sbjct: 108 EPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDY 167
Query: 134 RH--DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
+ D S I+ LG ++ N L F Y ++I FA + +
Sbjct: 168 QSMLDNSVVAIIISMLGKEGRVSSAANMFNG-LQEDGFSLDVYSYTSLISAFANSGRYRE 226
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
AV VFK M+ C+P++ +YN++ F G I L ++M +DGI
Sbjct: 227 AVNVFKKMEEDG---CKPTLITYNVILNVFGKMG-------TPWNKITSLVEKMKSDGIA 276
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVV-YNYLPNSFSYDYLIHGLCAQGRTKNAR 310
PD ++ N++I + +A ++F +M ++Y + +Y+ L+ R K A
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY--DKVTYNALLDVYGKSHRPKEAM 334
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
++ +EM GF PS +YNSL+SA A +G ++E ++ +M EK D TY T+L
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 371 CRRGRAGEAMKLLKELQN 388
R G+ AM + +E++N
Sbjct: 395 ERAGKVESAMSIFEEMRN 412
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 13/260 (5%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARK 188
K F +D TY+ + G + +E V+N+M+ F + YN++I +A
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN-GFSPSIVTYNSLISAYARDGM 364
Query: 189 LSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND 248
L A+ + M +P + +Y L + F GK +E+ +F++M N
Sbjct: 365 LDEAMELKNQMAEKGT---KPDVFTYTTLLSGFERAGK--------VESAMSIFEEMRNA 413
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G +P+I + N+ IK Y + ++IF ++ V P+ +++ L+ G
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC-GLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
+ EMKR GFVP +++N+L+SA + G E+ + M++ D TY TVL
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 369 EICRRGRAGEAMKLLKELQN 388
+ R G ++ K+L E+++
Sbjct: 533 ALARGGMWEQSEKVLAEMED 552
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 37/210 (17%)
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ SY L +AF + G+ Y E + +FK+M DG +P + + N +
Sbjct: 208 VYSYTSLISAFANSGR-------YREAVN-VFKKMEEDGCKPTLITYNVI---------- 249
Query: 271 NDALRIFHQMGVVYNYL-------------PNSFSYDYLIHGLCAQGRT-KNARELCDEM 316
L +F +MG +N + P++++Y+ LI C +G + A ++ +EM
Sbjct: 250 ---LNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEM 305
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
K GF +YN+L+ + +E +K L EM+ +TY +++ R G
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 377 GEAMKLLKELQNKNL-IDGYTYTKLLDVLE 405
EAM+L ++ K D +TYT LL E
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 126/325 (38%), Gaps = 73/325 (22%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAE 185
K+ F + T++ + +++ V +ML TP + YNT++ A
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL----STYNTVLAALAR 536
Query: 186 ARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI------- 238
++ V M++ R C+P+ +Y L A+ + GK + H E +
Sbjct: 537 GGMWEQSEKVLAEMEDGR---CKPNELTYCSLLHAY-ANGKEIGLMHSLAEEVYSGVIEP 592
Query: 239 -------------RC--------LFKQMVNDGIEPDIFSLNSMIKGY------ILSNHVN 271
+C F ++ G PDI +LNSM+ Y +N V
Sbjct: 593 RAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
Query: 272 DAL--RIFHQMGVVYNYL--------------------------PNSFSYDYLIHGLCAQ 303
D + R F YN L P+ SY+ +I+ C
Sbjct: 653 DYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRN 712
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
R ++A + EM+ G VP +YN+ + + A + EE + + MI+ + TY
Sbjct: 713 TRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Query: 364 RTVLDEICRRGRAGEAMKLLKELQN 388
+++D C+ R EA +++L+N
Sbjct: 773 NSIVDGYCKLNRKDEAKLFVEDLRN 797
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNY---LPNSFSYDYLIHGLCAQGRTKNARELC 313
L + +KG + ALR F +Y L NS +I L +GR +A +
Sbjct: 138 LLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSV-VAIIISMLGKEGRVSSAANMF 196
Query: 314 DEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRR 373
+ ++ GF SY SL+SA A +G E V +M E ITY +L+ +
Sbjct: 197 NGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKM 256
Query: 374 GRAGEAMKLLKELQNKNLI--DGYTYTKLL 401
G + L E + I D YTY L+
Sbjct: 257 GTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 104/195 (53%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +++ L AF+ GK +Y E M+ I+PDIF+ +S+I G+ + +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDE--------MIKRSIDPDIFTYSSLINGFCMHD 374
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A +F M + + PN +Y+ LI G C R + EL EM ++G V ++ +Y
Sbjct: 375 RLDEAKHMFELM-ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
N+L+ L G+ + K +M+ P D ITY +LD +C+ G+ +A+ + + LQ
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 389 KNL-IDGYTYTKLLD 402
+ D YTY +++
Sbjct: 494 SKMEPDIYTYNIMIE 508
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 21/276 (7%)
Query: 117 PLVCLELFNWASKQPRFRHDASTYHIMTRKLG-AAKMYQEMDDVVNQMLATPSFCGTEAL 175
PL L +++ +R S ++ KL A ++ EM Q PS
Sbjct: 31 PLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEM----VQSRPLPSIVE---- 82
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N ++ A+ K + + + M+N L + SYNIL F R + +
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQN---LRISYDLYSYNILINCFCRRSQ--------L 131
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ +M+ G EPDI +L+S++ GY +++A+ + QM V Y PN+ +++
Sbjct: 132 PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM-FVMEYQPNTVTFNT 190
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LIHGL + A L D M +G P +Y ++V+ L G+++ + L +M + +
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
D + Y T++D +C +A+ L E+ NK +
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 25/238 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F +A+++ + +F+ M + R L + +YN L G
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREM-SQRGL--VGNTVTYNTLIQGLFQAGD--------C 446
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL------PN 289
+ + +FK+MV+DG+ PDI + + ++ G + AL VV+ YL P+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL-------VVFEYLQKSKMEPD 499
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
++Y+ +I G+C G+ ++ +L + KG P+ Y +++S G EE
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
EM E + TY T++ R G + +L+KE+++ + D T + ++++L D
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 20/294 (6%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLEL--FNWASKQPRFRHDASTYHIMTRKLGAAKM 152
++E P +EL V L+++ V L L F + F+H T+ +M RKL
Sbjct: 32 LTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQ 91
Query: 153 YQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
+ ++ QM C +E L+ ++I + + RAV +F +K C PS++
Sbjct: 92 VDSVQYLLQQMKLQGFHC-SEDLFISVISVYRQVGLAERAVEMFYRIK---EFGCDPSVK 147
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
YN + L + I +YM +++ M DG EP++F+ N ++K +N V+
Sbjct: 148 IYNHVLDTLLGENR---IQMIYM-----VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDG 199
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A ++ +M P++ SY +I +C G K REL + F P YN+L+
Sbjct: 200 AKKLLVEMS-NKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALI 253
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ L + + + + EM+EK + I+Y T+++ +C G+ A L ++
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 125/291 (42%), Gaps = 40/291 (13%)
Query: 129 KQPRFRHDASTYHIMTRKL-------GAAKMYQEMD------DVVNQMLATPSFC----- 170
K+ F + TY+++ + L GA K+ EM D V+ S C
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 171 --GTE---------ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFT 219
G E ++YN +I + A F+ M+ P++ SY+ L
Sbjct: 233 KEGRELAERFEPVVSVYNALINGLCKEHDYKGA---FELMREMVEKGISPNVISYSTLIN 289
Query: 220 AFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
+ G+ +E QM+ G P+I++L+S++KG L DAL +++Q
Sbjct: 290 VLCNSGQ--------IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQ 341
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
M + PN +Y+ L+ G C+ G A + M+ G P+ ++Y SL++ A G
Sbjct: 342 MIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
++ V +M+ + + Y +++ +CR + EA L++ + +N
Sbjct: 402 SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN 452
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 30/253 (11%)
Query: 158 DVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNIL 217
D+ NQM+ YNT++ F + +AV VF +M+ + C P+IR+Y L
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE---IGCSPNIRTYGSL 393
Query: 218 FTAFLSRGK---NTYINH------------VYMETIRCL-----FKQ-------MVNDGI 250
F RG YI + VY + L FK+ M +
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
P + + N+ IKG + ++ A ++F QM + PN +Y+ L+ GL R + A
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
L E+ +G SS +YN+L+ G ++ + +M+ + D IT ++
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 371 CRRGRAGEAMKLL 383
C++G+A A ++L
Sbjct: 574 CKQGKAERAAQML 586
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
R +P++ +YN L F S G N V ++ F M G P+I + S+I
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHG-----NIVKAVSV---FSHMEEIGCSPNIRTYGSLIN 395
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
G+ ++ A+ I+++M + PN Y ++ LC + K A L + M ++
Sbjct: 396 GFAKRGSLDGAVYIWNKM-LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR-PVDFITYRTVLDEICRRGRAGEAMK 381
PS ++N+ + L G ++ K +M ++ R P + +TY +LD + + R EA
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYG 514
Query: 382 LLKEL 386
L +E+
Sbjct: 515 LTREI 519
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI- 250
A++ FK + NS + P ++ ++ G+ +++++ L +QM G
Sbjct: 59 ALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQ--------VDSVQYLLQQMKLQGFH 108
Query: 251 -EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNA 309
D+F S+I Y A+ +F+++ + P+ Y++++ L + R +
Sbjct: 109 CSEDLFI--SVISVYRQVGLAERAVEMFYRIKE-FGCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 310 RELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDE 369
+ +MKR GF P+ +YN L+ AL N +V+ K L EM K D ++Y TV+
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 370 ICRRGRAGEAMKLLKELQ 387
+C G E +L + +
Sbjct: 226 MCEVGLVKEGRELAERFE 243
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 91/231 (39%), Gaps = 31/231 (13%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
+ Y M L ++E + ++ ++++ + + +N I +A +L A V
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLI-EIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFL--SRGKNTY--INHVYMETIR------------ 239
F+ M+ C P+I +YN L +R + Y ++M +
Sbjct: 480 FRQMEQQH--RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537
Query: 240 -C----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY-NYL 287
C L +M+ DG PD ++N +I Y A ++ + +
Sbjct: 538 SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWR 597
Query: 288 PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
P+ SY +I GLC ++ L + M G VPS +++ L++ L+
Sbjct: 598 PDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILD 648
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 32/245 (13%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---------LSRGKNTY---INH--- 232
K+ AV +F M SR PSI +N L +A +S G+ I+H
Sbjct: 63 KVDDAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 233 VYMETIRC------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
Y I C + +M+ G EPDI +L+S++ GY S ++DA+ + QM
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
V Y P++F++ LIHGL + A L D+M ++G P +Y ++V+ L G+
Sbjct: 180 -VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
++ + L +M + + D + Y T++D +C+ +A+ L E+ NK + D +TY+
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298
Query: 400 LLDVL 404
L+ L
Sbjct: 299 LISCL 303
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 34/255 (13%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK--------- 226
+ T+I+ K S AV + M C+P + +Y + RG
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQR---GCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 227 --------------NTYINHV----YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
NT I+ + +M+ LF +M N GI PD+F+ +S+I
Sbjct: 248 KMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 307
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+DA R+ M + PN ++ LI +G+ A +L DEM ++ P +Y
Sbjct: 308 RWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 329 NSLVSALALNGEVEETVKNLWE-MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
+SL++ ++ ++E K+++E MI K + +TY T++ C+ R E M+L +E+
Sbjct: 367 SSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 388 NKNLI-DGYTYTKLL 401
+ L+ + TYT L+
Sbjct: 426 QRGLVGNTVTYTTLI 440
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 119/254 (46%), Gaps = 21/254 (8%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+Y EM + + + F Y+++I F +L A ++F+ M + +C
Sbjct: 347 AEKLYDEM---IKRSIDPDIFT-----YSSLINGFCMHDRLDEAKHMFELMISK---DCF 395
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +Y+ L F + +E LF++M G+ + + ++I G+ +
Sbjct: 396 PNVVTYSTLIKGFCKAKR--------VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
++A +F QM V PN +Y+ L+ GLC G+ A + + ++R P +Y
Sbjct: 448 DCDNAQMVFKQM-VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL-Q 387
N ++ + G+VE+ + + K + I Y T++ CR+G EA LLK++ +
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 388 NKNLIDGYTYTKLL 401
+ L + TY L+
Sbjct: 567 DGPLPNSGTYNTLI 580
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 47/244 (19%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
TY + + AK +E ++ +M + G Y T+I+ F +AR A VFK
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLN 258
M + + P+I +YNIL GK + +F+ + +EPDI++ N
Sbjct: 459 MVS---VGVHPNILTYNILLDGLCKNGK--------LAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 259 SMIKGYILSNHVNDALRIFHQMG--------VVYNY------------------------ 286
MI+G + V D +F + + YN
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 287 --LPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
LPNS +Y+ LI G + + EL EM+ GF + + LV+ + +G ++++
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS 626
Query: 345 VKNL 348
++
Sbjct: 627 FLDM 630
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 15/270 (5%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNT 178
V ++ F WA K+ F+HD STY + R L A++Y EM + +++ + A+ +
Sbjct: 108 VKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSE 167
Query: 179 IIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETI 238
++ A+ +S+A+ VF K + C+P+ +YN + + G++ ++ VY E
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRK---CKPTSSTYNSVILMLMQEGQHEKVHEVYTE-- 222
Query: 239 RCLFKQMVNDG-IEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYDYL 296
M N+G PD + +++I Y + A+R+F +M N + P Y L
Sbjct: 223 ------MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK--DNCMQPTEKIYTTL 274
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
+ G+ + A +L +EMKR G P+ +Y L+ L G V+E +M+
Sbjct: 275 LGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D + +++ + + GR E + E+
Sbjct: 335 TPDVVFLNNLMNILGKVGRVEELTNVFSEM 364
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 125/300 (41%), Gaps = 55/300 (18%)
Query: 138 STYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFK 197
S+Y + R A +++ EM D Q TE +Y T++ + + K+ +A+ +F+
Sbjct: 241 SSYEKLGRNDSAIRLFDEMKDNCMQ--------PTEKIYTTLLGIYFKVGKVEKALDLFE 292
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
MK + C P++ +Y L GK ++ Y +K M+ DG+ PD+ L
Sbjct: 293 EMKRAG---CSPTVYTYTELIKGL---GKAGRVDEAY-----GFYKDMLRDGLTPDVVFL 341
Query: 258 NSMIKGYILSNHVNDALRIFHQMG--------VVYNYL---------------------- 287
N+++ V + +F +MG V YN +
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
Query: 288 -----PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
P+ F+Y LI G C R + A L +EM KGF P +Y SL++AL E
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ E+ E V Y ++ + G+ EA+ L E++N+ D Y Y L+
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 152 MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMK-NSRNLECRPS 210
+ +EMD+ F A Y ++I +A++ A +FK +K N N+ S
Sbjct: 431 LLEEMDE--------KGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV----S 478
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
R Y ++ F GK + LF +M N G PD+++ N+++ G + + +
Sbjct: 479 SRVYAVMIKHFGKCGK--------LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 271 NDA---LRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
N+A LR + G + S++ +++G G + A E+ + +K G P +
Sbjct: 531 NEANSLLRKMEENGC----RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
YN+L+ A G EE + + EM +K D ITY ++LD +
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 113/301 (37%), Gaps = 52/301 (17%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
TY + + LG A E ML TP N ++ + ++ V
Sbjct: 305 TYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV----VFLNNLMNILGKVGRVEELTNV 360
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F M R C P++ SYN + A + ++ + F +M D + P F
Sbjct: 361 FSEMGMWR---CTPTVVSYNTVIKALFE-------SKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYLPNSFS--------------- 292
+ + +I GY +N V AL + +M Y L N+
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 293 -----------YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
Y +I G+ A +L +EMK +G P +YN+L+S + G +
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKL 400
E L +M E D ++ +L+ R G A+++ + +++ + DG TY L
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 401 L 401
L
Sbjct: 591 L 591
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 143/329 (43%), Gaps = 43/329 (13%)
Query: 94 AVSELPPRFNNEELCNVMTLQEDPLVCLELFNWASK----QPRFR--HDASTYHIMTRKL 147
A + L F E C V+ + LV L+ A K RF+ +D T++I+ R L
Sbjct: 157 ATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 148 ---GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
G A+ E+ V++ P YNT+I F ++ +L++A +FK +K+
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDI----VTYNTLIQGFCKSNELNKASEMFKDVKSGS- 271
Query: 205 LECRPSIRSYNILFTAFLSRGK---------------------------NTYINHVYMET 237
C P + +Y + + + GK + Y M T
Sbjct: 272 -VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ +M++ G PD+ + S+I GY V+ R++ +M PN+F+Y LI
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA-RGMFPNAFTYSILI 389
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
+ LC + R AREL ++ K +P YN ++ G+V E + EM +K+
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKEL 386
D IT+ ++ C +GR EA+ + ++
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 134/329 (40%), Gaps = 46/329 (13%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
V L +P + + ++ + RH TY+++TR L A ++ D+ QM
Sbjct: 76 VKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLH----DLAGQMFECMKS 131
Query: 170 CGTEA---LYNTIIYFFAEARKLSRAVYVF------------------------------ 196
G L ++ FAE KL A +
Sbjct: 132 DGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAM 191
Query: 197 KYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFS 256
K + +++NIL GK E L M G EPDI +
Sbjct: 192 KLFDEHLRFQSCNDTKTFNILIRGLCGVGK--------AEKALELLGVMSGFGCEPDIVT 243
Query: 257 LNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEM 316
N++I+G+ SN +N A +F + P+ +Y +I G C G+ + A L D+M
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 317 KRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRA 376
R G P++ ++N LV A GE+ + +MI D +T+ +++D CR G+
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 377 GEAMKLLKELQNKNLI-DGYTYTKLLDVL 404
+ +L +E+ + + + +TY+ L++ L
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINAL 392
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 120/223 (53%), Gaps = 17/223 (7%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K AV +F+ M SR L P++ +N LF+A +++ K E + L KQM +
Sbjct: 68 KADDAVDLFRDMIQSRPL---PTVIDFNRLFSA-IAKTKQ-------YELVLALCKQMES 116
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV--YNYLPNSFSYDYLIHGLCAQGR 305
GI I++L+ MI + ++ A F MG + Y P++ ++ L++GLC + R
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYA---FSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A EL D M G P+ + N+LV+ L LNG+V + V + M+E + +TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
VL+ +C+ G+ AM+LL++++ +N+ +D Y+ ++D L D
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 109 NVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPS 168
NVM + +EL ++ + DA Y I+ L ++ N+M
Sbjct: 236 NVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKG 293
Query: 169 FCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
F YNT+I F A + + + M + P++ ++++L +F+ GK
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK---ISPNVVTFSVLIDSFVKEGKLR 350
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
+ L K+M+ GI P+ + NS+I G+ N + +A+++ M + P
Sbjct: 351 EADQ--------LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM-ISKGCDP 401
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ +++ LI+G C R + EL EM +G + ++ +YN+LV +G++E K
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 349 WEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
EM+ ++ D ++Y+ +LD +C G +A+++ +++ +
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 116/244 (47%), Gaps = 14/244 (5%)
Query: 159 VVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
++++M+ T F E Y ++ ++ + + A+ + + M+ RN++ Y+I+
Sbjct: 215 LIDRMVET-GFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAV--KYSIII 270
Query: 219 TAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFH 278
G ++ LF +M G + DI + N++I G+ + +D ++
Sbjct: 271 DGLCKDGS--------LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 279 QMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALN 338
M + PN ++ LI +G+ + A +L EM ++G P++ +YNSL+
Sbjct: 323 DM-IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 339 GEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTY 397
+EE ++ + MI K D +T+ +++ C+ R + ++L +E+ + +I + TY
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 398 TKLL 401
L+
Sbjct: 442 NTLV 445
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 46/261 (17%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
+ +I F RKLS Y F M L P +N L + + E
Sbjct: 127 SIMINCFCRCRKLS---YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVS-------E 176
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------------GVVY 284
+ L +MV G +P + +LN+++ G L+ V+DA+ + +M G V
Sbjct: 177 ALE-LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 285 NYLPNS----------------------FSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
N + S Y +I GLC G NA L +EM+ KGF
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
+YN+L+ G ++ K L +MI+++ + +T+ ++D + G+ EA +L
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 383 LKELQNKNLI-DGYTYTKLLD 402
LKE+ + + + TY L+D
Sbjct: 356 LKEMMQRGIAPNTITYNSLID 376
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ II + L A +F M+ + I +YN L F + G+
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIK---GFKADIITYNTLIGGFCNAGR--------W 314
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L + M+ I P++ + + +I ++ + +A ++ +M + PN+ +Y+
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM-MQRGIAPNTITYNS 373
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C + R + A ++ D M KG P ++N L++ +++ ++ EM +
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLEDD 407
+ +TY T++ C+ G+ A KL +E+ ++ + D +Y LLD L D+
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 116/290 (40%), Gaps = 32/290 (11%)
Query: 139 TYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKY 198
T+ ++ +E D ++ +M+ YN++I F + +L A+ +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 199 MKNSRNLECRPSIRSYNILFTAFLSRGK-----------------------NTYINHV-- 233
M + C P I ++NIL + + NT +
Sbjct: 394 MISK---GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 234 --YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+E + LF++MV+ + PDI S ++ G + + AL IF ++ L
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
Y +IHG+C + +A +L + KG +++YN ++S L + + +M
Sbjct: 511 -YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
E+ D +TY ++ A A +L++E+++ + K++
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ F ++ KL A +F+ M + R RP I SY IL G+ +
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRR---VRPDIVSYKILLDGLCDNGE--------L 489
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +F ++ +E DI +I G ++ V+DA +F + + L ++ +Y+
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL-DARAYNI 548
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I LC + A L +M +G P +YN L+ A + + + + EM
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Query: 356 RPVDFITYRTVLD 368
P D T + V++
Sbjct: 609 FPADVSTVKMVIN 621
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 136/288 (47%), Gaps = 21/288 (7%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLA---TPSFCGTEALYN 177
LE+F + ++ R DA TY+ + L + + + ++ M+ P+ AL +
Sbjct: 204 LEVF-YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
T F + L A ++K M + P++ +YN L F G +
Sbjct: 263 T----FVKEGNLLEARNLYKEMIRRSVV---PNVFTYNSLINGFCIHG--------CLGD 307
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ +F MV+ G PD+ + N++I G+ S V D +++F +M + ++F+Y+ LI
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-TYQGLVGDAFTYNTLI 366
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
HG C G+ A+++ + M G P +YN L+ L NG++E+ + + ++ + +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
VD ITY ++ +CR + EA L + L K + D Y ++ L
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 130/300 (43%), Gaps = 33/300 (11%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
FR T + +QE +V+ M F +YNT+I + R L+ A
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF-GFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGK-------------------------- 226
+ VF M+ R +YN L + + G+
Sbjct: 204 LEVFYCMEKK---GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260
Query: 227 -NTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYN 285
+T++ + R L+K+M+ + P++F+ NS+I G+ + + DA +F M V
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM-VSKG 319
Query: 286 YLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
P+ +Y+ LI G C R ++ +L EM +G V + +YN+L+ G++
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
K M++ D +TY +LD +C G+ +A+ ++++LQ + +D TY ++ L
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 87/160 (54%), Gaps = 2/160 (1%)
Query: 244 QMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQ 303
+M+ G P I +L S++ G+ N +A+ + M + ++PN Y+ +I+GLC
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG-FGFVPNVVIYNTVINGLCKN 197
Query: 304 GRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITY 363
NA E+ M++KG + +YN+L+S L+ +G + + L +M++++ + I +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 364 RTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
++D + G EA L KE+ ++++ + +TY L++
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 23/199 (11%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY+ + +K ++ + +M G YNT+I+ + +A KL+ A V
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEM-TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 196 FKYMKNSRNLEC--RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPD 253
F +R ++C P I +YNIL + GK +E + + + ++ D
Sbjct: 382 F-----NRMVDCGVSPDIVTYNILLDCLCNNGK--------IEKALVMVEDLQKSEMDVD 428
Query: 254 IFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
I + N +I+G ++ + +A +F + GV P++ +Y +I GLC +G + A
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK----PDAIAYITMISGLCRKGLQREAD 484
Query: 311 ELCDEMKRKGFVPSSKSYN 329
+LC MK GF+PS + Y+
Sbjct: 485 KLCRRMKEDGFMPSERIYD 503
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 145/331 (43%), Gaps = 55/331 (16%)
Query: 113 LQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDV--VNQMLATPSFC 170
++E P + F W+ KQ ++ H+ Y + L AK ++D + V+ + F
Sbjct: 128 IREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAK---DVDRIRFVSSEIKKFEFP 184
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
T + N +I F + + ++V++ MK + P++ +YN L N +
Sbjct: 185 MTVSAANALIKSFGKLGMVEELLWVWRKMKEN---GIEPTLYTYNFLM--------NGLV 233
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GV 282
+ +++++ +F+ M + I+PDI + N+MIKGY + A+ M +
Sbjct: 234 SAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKI 293
Query: 283 VYNYL----------------------------PNSFSYDYLIHGLCAQGRTKNARELCD 314
Y + P++FS +I GLC +G+ + +
Sbjct: 294 TYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL--VIGGLCKEGKLNEGYTVFE 351
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
M RKG P+ Y L+ A +G VE+ ++ L MI++ D +TY V++ +C+ G
Sbjct: 352 NMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNG 411
Query: 375 RAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
R EA+ + L I+ Y+ L+D L
Sbjct: 412 RVEEALDYFHTCRFDGLAINSMFYSSLIDGL 442
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 15/272 (5%)
Query: 132 RFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSR 191
R + D TY+ M + A Q+ + + M T + Y T+I
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM-ETRGHEADKITYMTMIQACYADSDFGS 310
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
V +++ M + + ++ P +++++ GK +N Y +F+ M+ G +
Sbjct: 311 CVALYQEM-DEKGIQVPP--HAFSLVIGGLCKEGK---LNEGYT-----VFENMIRKGSK 359
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
P++ +I GY S V DA+R+ H+M + + P+ +Y +++GLC GR + A +
Sbjct: 360 PNVAIYTVLIDGYAKSGSVEDAIRLLHRM-IDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
+ G +S Y+SL+ L G V+E + EM EK D Y ++D
Sbjct: 419 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 372 RRGRAGEAMKLLKELQNKNLIDG--YTYTKLL 401
+ + EA+ L K ++ + D YTYT LL
Sbjct: 479 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 510
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 58/278 (20%)
Query: 152 MYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
+YQEMD+ + + P ++ +I + KL+ VF+ M + +P++
Sbjct: 314 LYQEMDE---KGIQVPPHA-----FSLVIGGLCKEGKLNEGYTVFENMIRKGS---KPNV 362
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVN 271
Y +L + G + IR L +M+++G +PD+ + + ++ G + V
Sbjct: 363 AIYTVLIDGYAKSGS-------VEDAIR-LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 272 DALRIFHQMGVVYNYLP-NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
+AL FH ++ L NS Y LI GL GR A L +EM KG S YN+
Sbjct: 415 EALDYFHT--CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 331 LVSALALNGEVEETVK-----------------------------------NLWEM-IEK 354
L+ A + +V+E + LW+M I+K
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 532
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+R + +C G+ A K+L EL +I
Sbjct: 533 GITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
LF++M G D + N++I + V++A+ +F +M ++Y L+ G+
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGM 513
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ R + A +L D M KG P++ + +L + L L+G+V K L E+ +D
Sbjct: 514 FKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD- 572
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+++ +C+ GR EA KL + + + G T +++ L
Sbjct: 573 AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINAL 617
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCG---TEALYNTIIYFFAEARKL 189
F+ D TY ++ L +E D + T F G Y+++I +A ++
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFH----TCRFDGLAINSMFYSSLIDGLGKAGRV 448
Query: 190 SRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND- 248
A +F+ M C YN L AF H ++ LFK+M +
Sbjct: 449 DEAERLFEEMSEK---GCTRDSYCYNALIDAF--------TKHRKVDEAIALFKRMEEEE 497
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G + +++ ++ G + +AL+++ M + P + + L GLC G+
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMM-IDKGITPTAACFRALSTGLCLSGKVAR 556
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A ++ DE+ G + + + +++ L G ++E K + E+ R V +++
Sbjct: 557 ACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 615
Query: 369 EICRRGRAGEAMKLL 383
+ + G+A AMKL+
Sbjct: 616 ALRKVGKADLAMKLM 630
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 152/303 (50%), Gaps = 23/303 (7%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQ--PRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM 163
++ +M ++D + +F+ A+ + + HD S++ M +L +A ++ +D++ +M
Sbjct: 18 QVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRM 77
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLS 223
+ +E + +I + + ++ VF MK+ +C PS ++Y + +
Sbjct: 78 -KIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKD---FDCDPSQKAYVTVLAILVE 133
Query: 224 RGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA-LRIFHQMGV 282
+ +N + +K M G+ P + SLN +IK ++ DA L+IF +M
Sbjct: 134 ENQ---LNLAFK-----FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPK 185
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
P+S++Y LI GLC GR A++L EM K P+ +Y SL++ L + V+
Sbjct: 186 -RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 343 ETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNK----NLIDGYTYT 398
E ++ L EM K + TY +++D +C+ GR+ +AM+L + + + N++ TYT
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV---TYT 301
Query: 399 KLL 401
L+
Sbjct: 302 TLI 304
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 16/233 (6%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
++ Y T++ E +L+ A FK+ KN R + P++ S N+L A L R T
Sbjct: 120 SQKAYVTVLAILVEENQLNLA---FKFYKNMREIGLPPTVASLNVLIKA-LCRNDGTVDA 175
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
+ +F +M G +PD ++ ++I G +++A ++F +M V + P
Sbjct: 176 GLK------IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM-VEKDCAPTVV 228
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEM 351
+Y LI+GLC A +EMK KG P+ +Y+SL+ L +G + ++ L+EM
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME-LFEM 287
Query: 352 IEKQ--RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
+ + RP + +TY T++ +C+ + EA++LL + + L D Y K++
Sbjct: 288 MMARGCRP-NMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 20/237 (8%)
Query: 172 TEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYIN 231
T Y ++I ++ + A+ + MK S+ +E P++ +Y+ L G++
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMK-SKGIE--PNVFTYSSLMDGLCKDGRSLQA- 281
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSF 291
ME LF+ M+ G P++ + ++I G + +A+ + +M + P++
Sbjct: 282 ---ME----LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNL-QGLKPDAG 333
Query: 292 SYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS-------KSYNSLVSALALNGEVEET 344
Y +I G CA + + A DEM G P+ K+ N +V L N
Sbjct: 334 LYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAF 393
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
L M + V+ T +++ +C++G +A++L+ E+ I KLL
Sbjct: 394 TLYL-SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLL 449
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 10/206 (4%)
Query: 198 YMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSL 257
+M N + P++ +Y L + S+GK IN + +R L+ +M GI P I++
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGK---IN----KALR-LYHEMTGKGIAPSIYTF 510
Query: 258 NSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK 317
+++ G + + DA+++F++M +N PN +Y+ +I G C +G A E EM
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 318 RKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAG 377
KG VP + SY L+ L L G+ E + + + ++ I Y +L CR G+
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 378 EAMKLLKELQNKNL-IDGYTYTKLLD 402
EA+ + +E+ + + +D Y L+D
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLID 655
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
+YN +I + RK A +F M + RP+ +Y+IL F RGK
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGK---IGLRPNDVTYSILIDMFCRRGK-------- 417
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
++T +MV+ G++ ++ NS+I G+ ++ A +M + P +Y
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM-INKKLEPTVVTYT 476
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ G C++G+ A L EM KG PS ++ +L+S L G + + VK EM E
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
+ +TY +++ C G +A + LKE+ K ++ D Y+Y L+
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 135/343 (39%), Gaps = 65/343 (18%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMY--------------QEMDDVV 160
+DP + L FN+ F H +++ I+ L A ++ + DV
Sbjct: 82 DDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVF 141
Query: 161 NQMLATPSFC--GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILF 218
N + + C + + ++ +I + +R++ V VFK M +L P +R+ + L
Sbjct: 142 NVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSL--LPEVRTLSALL 199
Query: 219 TAFLSRGKNTYINH--VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
+ H + ME LF MV+ GI PD++ +I+ ++ A +
Sbjct: 200 HGLVK------FRHFGLAME----LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 277 FHQMG--------VVYNYL--------------------------PNSFSYDYLIHGLCA 302
M V YN L P+ +Y L++GLC
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ E+ DEM F PS + +SLV L G++EE + + +++ +
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
Y ++D +C+ + EA L + L + TY+ L+D+
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 122/285 (42%), Gaps = 17/285 (5%)
Query: 119 VCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YN 177
+ +ELFN R D Y + R L K +++ M AT C + YN
Sbjct: 210 LAMELFN-DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATG--CDVNIVPYN 266
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMET 237
+I + +K+ AV + K + + +P + +Y L L + + I M+
Sbjct: 267 VLIDGLCKKQKVWEAVGIKKDLAGK---DLKPDVVTYCTLVYG-LCKVQEFEIGLEMMDE 322
Query: 238 IRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLI 297
+ CL P +++S+++G + +AL + ++ V + PN F Y+ LI
Sbjct: 323 MLCL-------RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV-VDFGVSPNLFVYNALI 374
Query: 298 HGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRP 357
LC + A L D M + G P+ +Y+ L+ G+++ + L EM++
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 358 VDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLL 401
+ Y ++++ C+ G A + E+ NK L TYT L+
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 15/234 (6%)
Query: 173 EALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINH 232
E Y +++ F KL A+ V + M R ++ + Y +L L H
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQEMVQ-RGVDL--DLVCYGVLIDGSL--------KH 660
Query: 233 VYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFS 292
+ L K+M + G++PD SMI + +A I+ M + +PN +
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM-INEGCVPNEVT 719
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE-ETVKNLWEM 351
Y +I+GLC G A LC +M+ VP+ +Y + L GEV+ + L
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT-KGEVDMQKAVELHNA 778
Query: 352 IEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
I K + TY ++ CR+GR EA +L+ + + D TYT +++ L
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+YN+L F +G+ +E L +M+ DG+ PD + +MI N V
Sbjct: 789 TYNMLIRGFCRQGR--------IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A+ +++ M P+ +Y+ LIHG C G A EL +EM R+G +P++K+ +
Sbjct: 841 AIELWNSM-TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTT 899
Query: 333 S 333
S
Sbjct: 900 S 900
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 36/187 (19%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-------------------- 280
++ M+N+G P+ + ++I G + VN+A + +M
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 281 --------------GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++ L N+ +Y+ LI G C QGR + A EL M G P
Sbjct: 764 KGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 327 SYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKE 385
+Y ++++ L +V++ ++ LW M EK D + Y T++ C G G+A +L E
Sbjct: 824 TYTTMINELCRRNDVKKAIE-LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 386 LQNKNLI 392
+ + LI
Sbjct: 883 MLRQGLI 889
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 125/292 (42%), Gaps = 46/292 (15%)
Query: 134 RHDASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEA 186
+ D TY + L A +++EM+ T + YN+++ +A
Sbjct: 225 KADVFTYSTIIDSLCRDGCIDAAISLFKEME--------TKGIKSSVVTYNSLVRGLCKA 276
Query: 187 RKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIR------- 239
K + + K M + E P++ ++N+L F+ GK N +Y E I
Sbjct: 277 GKWNDGALLLKDMVSR---EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 240 ----------CL----------FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ 279
C+ MV + PDI + S+IKGY + V+D +++F
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 280 MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNG 339
+ + N+ +Y L+ G C G+ K A EL EM G +P +Y L+ L NG
Sbjct: 394 ISK-RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 340 EVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
++E+ ++ ++ + + + + Y T+++ +C+ G+ +A L L K +
Sbjct: 453 KLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIE 251
A+ +F+ M SR L PS+ ++ F+A ++R K + KQ+ +GI
Sbjct: 72 AIALFQEMIRSRPL---PSLVDFSRFFSA-IARTKQ-------FNLVLDFCKQLELNGIA 120
Query: 252 PDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARE 311
+I++LN MI + A + ++ + Y P++ +++ LI GL +G+ A
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKV-MKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 312 LCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
L D M G P +YNS+V+ + +G+ + L +M E+ D TY T++D +C
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239
Query: 372 RRGRAGEAMKLLKELQNKNL 391
R G A+ L KE++ K +
Sbjct: 240 RDGCIDAAISLFKEMETKGI 259
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 10/213 (4%)
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
+ + + + L P ++N L GK + E + L +MV +G
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS-------EAV-VLVDRMVENGC 189
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
+PD+ + NS++ G S + AL + +M N + F+Y +I LC G A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEI 370
L EM+ KG S +YNSLV L G+ + L +M+ ++ + IT+ +LD
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 371 CRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLD 402
+ G+ EA +L KE+ + + TY L+D
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 199 MKNSRNLECRPSIR---SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
MK RN+ R + +Y+IL F GK LF++MV+ G+ PD+
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE--------LFQEMVSHGVLPDVM 439
Query: 256 SLNSMIKGYILSNHVNDALRIFHQM-------GVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
+ ++ G + + AL IF + G+V Y +I G+C G+ ++
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM--------YTTIIEGMCKGGKVED 491
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A L + KG P+ +Y ++S L G + E L +M E + TY T++
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 369 EICRRGRAGEAMKLLKELQN 388
R G + KL++E+++
Sbjct: 552 AHLRDGDLTASAKLIEEMKS 571
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ ++ F ++ K+ A +F+ M + L P + +Y IL GK +
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVL---PDVMTYGILLDGLCDNGK--------L 454
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E +F+ + ++ I ++I+G V DA +F + PN +Y
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC-KGVKPNVMTYTV 513
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC +G A L +M+ G P+ +YN+L+ A +G++ + K + EM
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 356 RPVDFITYRTVLD 368
D + + V+D
Sbjct: 574 FSADASSIKMVID 586
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 20/212 (9%)
Query: 136 DASTYHIMTRKL---GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
+A TY I+ + G K+ +E+ Q + + Y ++ + KL +A
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEEL----FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKA 457
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
+ +F+ ++ S+ I Y + GK +E LF + G++P
Sbjct: 458 LEIFEDLQKSKM---DLGIVMYTTIIEGMCKGGK--------VEDAWNLFCSLPCKGVKP 506
Query: 253 DIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAREL 312
++ + MI G +++A + +M N PN +Y+ LI G + +L
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 313 CDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
+EMK GF + S ++ L L+GE++++
Sbjct: 566 IEEMKSCGFSADASSIKMVIDML-LSGELDKS 596
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 154/321 (47%), Gaps = 24/321 (7%)
Query: 95 VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASK-QPRFRHDASTYHIMTRKLGAAKMY 153
+ P R + L +++T Q++ + L++F +A K P F H+ TYH + KL A+ +
Sbjct: 40 IKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAF 99
Query: 154 QEMDDVVNQMLAT--PSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSI 211
++ ++ + + P CG E L+ ++ + A + ++ +F + + + S+
Sbjct: 100 DPVESLMADLRNSYPPIKCG-ENLFIDLLRNYGLAGRYESSMRIFLRIP---DFGVKRSV 155
Query: 212 RSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVND-GIEPDIFSLNSMIKGYILSNHV 270
RS N L N I + + + +FK GI P+IF+ N ++K N +
Sbjct: 156 RSLNTLL--------NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDI 207
Query: 271 NDALRIFHQ---MGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
A ++ + MG+V PN +Y ++ G A+G ++A+ + +EM +G+ P + +
Sbjct: 208 ESAYKVLDEIPSMGLV----PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATT 263
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y L+ G E + +M + + + +TY ++ +C+ ++GEA + E+
Sbjct: 264 YTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEML 323
Query: 388 NKNLI-DGYTYTKLLDVLEDD 407
++ + D K++D L +D
Sbjct: 324 ERSFMPDSSLCCKVIDALCED 344
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 11/208 (5%)
Query: 195 VFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDI 254
+K + ++ P++ +Y + +++RG ME+ + + ++M++ G PD
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGD--------MESAKRVLEEMLDRGWYPDA 261
Query: 255 FSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCD 314
+ ++ GY ++A + M PN +Y +I LC + ++ AR + D
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEK-NEIEPNEVTYGVMIRALCKEKKSGEARNMFD 320
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEKQRPVDFITYRTVLDEICRR 373
EM + F+P S ++ AL + +V+E LW +M++ D T++ +C+
Sbjct: 321 EMLERSFMPDSSLCCKVIDALCEDHKVDEAC-GLWRKMLKNNCMPDNALLSTLIHWLCKE 379
Query: 374 GRAGEAMKLLKELQNKNLIDGYTYTKLL 401
GR EA KL E + ++ TY L+
Sbjct: 380 GRVTEARKLFDEFEKGSIPSLLTYNTLI 407
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y ++ + + + S A V M+ + E P+ +Y ++ A K+
Sbjct: 264 YTVLMDGYCKLGRFSEAATVMDDMEKN---EIEPNEVTYGVMIRALCKEKKSG------- 313
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
R +F +M+ PD +I + V++A ++ +M + N +P++
Sbjct: 314 -EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM-LKNNCMPDNALLST 371
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW-EMIEK 354
LIH LC +GR AR+L DE + KG +PS +YN+L++ + GE+ E + LW +M E+
Sbjct: 372 LIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGR-LWDDMYER 429
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ + TY +++ + + G E +++L+E+
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM 461
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L+++M+ + PD L+++I V +A ++F + +P+ +Y+ LI G+
Sbjct: 353 LWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE--KGSIPSLLTYNTLIAGM 410
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C +G A L D+M + P++ +YN L+ L+ NG V+E V+ L EM+E +
Sbjct: 411 CEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNK 470
Query: 361 ITYRTVLDEICRRGRAGEAMKLL 383
T+ + + + + G+ +AMK++
Sbjct: 471 TTFLILFEGLQKLGKEEDAMKIV 493
>sp|Q3E9F0|PP392_ARATH Pentatricopeptide repeat-containing protein At5g18475
OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1
Length = 506
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 162/368 (44%), Gaps = 68/368 (18%)
Query: 102 FNNEELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVN 161
++E ++M + DP L++FN AS+Q F H+ +TY ++ L K + +D +++
Sbjct: 54 ISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILH 113
Query: 162 QM-LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMK-------------------- 200
QM T F E+L+ ++ F+ + + + +F ++
Sbjct: 114 QMKYETCRF--QESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLI 171
Query: 201 --------------NSRNLECRPSIRSYNILFT----------AFL-----SRGKNTYIN 231
NL +P+ +NIL AFL R +Y N
Sbjct: 172 DSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPN 231
Query: 232 HV-YMETIRCLF-----KQMVN--------DGIEPDIFSLNSMIKGYILSNHVNDALRIF 277
+ Y + CLF K+ V +GI PD + N MI G+ + V A +I
Sbjct: 232 SITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKIL 291
Query: 278 HQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALAL 337
M PN ++Y L++G C G+ + A++ DE+K+ G + Y +L++
Sbjct: 292 DFMK-KNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR 350
Query: 338 NGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYT 396
NGE +E +K L EM + D +TY +L + GR+ EA+++L + ++ + ++ +
Sbjct: 351 NGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGS 410
Query: 397 YTKLLDVL 404
Y +L+ L
Sbjct: 411 YRIILNAL 418
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 119/259 (45%), Gaps = 12/259 (4%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
++ TY + L A +E ++ M++ +N +I F A ++ RA +
Sbjct: 231 NSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKI 290
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
+MK + C P++ +Y+ L F GK ++ + F ++ G++ D
Sbjct: 291 LDFMKKNG---CNPNVYNYSALMNGFCKVGK--------IQEAKQTFDEVKKTGLKLDTV 339
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDE 315
+++ + + ++A+++ +M ++ +Y+ ++ GL ++GR++ A ++ D+
Sbjct: 340 GYTTLMNCFCRNGETDEAMKLLGEMKA-SRCRADTLTYNVILRGLSSEGRSEEALQMLDQ 398
Query: 316 MKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGR 375
+G + SY +++AL NGE+E+ VK L M E+ T+ ++ +C G
Sbjct: 399 WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGY 458
Query: 376 AGEAMKLLKELQNKNLIDG 394
+++L LI G
Sbjct: 459 TEIGVRVLIGFLRIGLIPG 477
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ F + A+ + MK SR CR +YN++ S G++
Sbjct: 341 YTTLMNCFCRNGETDEAMKLLGEMKASR---CRADTLTYNVILRGLSSEGRS-------- 389
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + Q ++G+ + S ++ + + A++ M P+ +++
Sbjct: 390 EEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSE-RGIWPHHATWNE 448
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSAL 335
L+ LC G T+ + R G +P KS+ ++V ++
Sbjct: 449 LVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESI 488
>sp|Q9SZ10|PP338_ARATH Pentatricopeptide repeat-containing protein At4g26680,
mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2
SV=1
Length = 521
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 146/344 (42%), Gaps = 63/344 (18%)
Query: 110 VMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSF 169
++ +Q+D L+ LE FNWA + H T+ I+ L + ++ + ++ +L
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGV 147
Query: 170 ----------------C-GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIR 212
C T +++++ FA +K A F MK+ L P++
Sbjct: 148 DLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFL---PTVE 204
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
S N ++ L +G+ Y E RC I P+ ++LN ++ GY S ++
Sbjct: 205 SCNAYMSSLLGQGRVDIALRFYREMRRC--------KISPNPYTLNMVMSGYCRSGKLDK 256
Query: 273 ALRIFHQM--------GVVYNYL--------------------------PNSFSYDYLIH 298
+ + M V YN L PN +++ LIH
Sbjct: 257 GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G C + + A ++ EMK P++ +YN+L++ + G+ E + +M+
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQR 376
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
D +TY ++ +C++ + +A + +KEL +NL+ + T++ L+
Sbjct: 377 DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I+ F A KL A VF MK + P+ +YN L + +G +
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKA---VNVAPNTVTYNTLINGYSQQGDH-------- 359
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E ++ MV +GI+ DI + N++I G A + ++ N +PNS ++
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK-ENLVPNSSTFSA 418
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C + EL M R G P+ +++N LVSA N + + + L EM+ +
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRS 478
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
P+D T V + + +G+ KLL+E++ K +
Sbjct: 479 IPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP-NSFSYDYLIHG 299
L+K M+ G P+ + N ++ + + + A ++ +M V +P +S + + +G
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM--VRRSIPLDSRTVHQVCNG 492
Query: 300 LCAQGRTKNARELCDEMKRKGFVPSS 325
L QG+ + ++L EM+ K F+ S
Sbjct: 493 LKHQGKDQLVKKLLQEMEGKKFLQES 518
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 13/230 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F E ++L +A+ + MK S C S+ ++ IL AF GK M
Sbjct: 180 YNTVIRGFCEGKELEKALELANEMKGSG---CSWSLVTWGILIDAFCKAGK--------M 228
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ K+M G+E D+ S+I+G+ ++ +F ++ + P + +Y+
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV-LERGDSPCAITYNT 287
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C G+ K A E+ + M +G P+ +Y L+ L G+ +E ++ L MIEK
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ +TY +++++C+ G +A+++++ ++ + D TY LL L
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEA---LYNTIIYFFAEARKLSRAVYVFKYMKNSRNL 205
A KM + M L F G EA +Y ++I F + +L R +F + +
Sbjct: 225 AGKMDEAM-----GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD- 278
Query: 206 ECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYI 265
P +YN L F G+ + + F+ M+ G+ P++++ +I G
Sbjct: 279 --SPCAITYNTLIRGFCKLGQLKEASEI--------FEFMIERGVRPNVYTYTGLIDGLC 328
Query: 266 LSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSS 325
+AL++ + M + + PN+ +Y+ +I+ LC G +A E+ + MK++ P +
Sbjct: 329 GVGKTKEALQLLNLM-IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 326 KSYNSLVSALALNGEVEETVKNLWEMIEKQR--PVDFITYRTVLDEICRRGRAGEAMKLL 383
+YN L+ L G+++E K L+ M++ D I+Y ++ +C+ R +A+ +
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 384 KELQNK 389
L K
Sbjct: 448 DLLVEK 453
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 48/256 (18%)
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---LSRGK--NTYINHVYME- 236
F+ RK+ ++ S LEC +R F L RG N Y +++ ++
Sbjct: 92 FSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKG 151
Query: 237 ---TIRC-----LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG------- 281
+ C L ++M + + PD+FS N++I+G+ + AL + ++M
Sbjct: 152 LCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWS 211
Query: 282 -VVYNYLPNSFS--------------------------YDYLIHGLCAQGRTKNARELCD 314
V + L ++F Y LI G C G + L D
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374
E+ +G P + +YN+L+ G+++E + MIE+ + TY ++D +C G
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 375 RAGEAMKLLKELQNKN 390
+ EA++LL + K+
Sbjct: 332 KTKEALQLLNLMIEKD 347
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 129 KQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-YNTIIYFFAEAR 187
K+ R R D TY+I+ L A E ++ ML S+ + + YN +I+ +
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
+L +A+ ++ + R + NIL + L G +N ME L+KQ+ +
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTT---NILLNSTLKAGD---VNKA-ME----LWKQISD 487
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
I + + +MI G+ + +N A + +M V P+ F Y+ L+ LC +G
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV-SELQPSVFDYNCLLSSLCKEGSLD 546
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A L +EM+R P S+N ++ G+++ L M D TY ++
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLI 606
Query: 368 DEICRRGRAGEAMKLLKEL 386
+ + G EA+ ++
Sbjct: 607 NRFLKLGYLDEAISFFDKM 625
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 48/264 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN II + ++ AV + + MK R RP +YNIL ++G +
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRT---RPDNITYNILLGGLCAKGD--------L 403
Query: 236 ETIRCLFKQMVNDG--IEPDIFSLNSMIKGYILSNHVNDALRIF----HQMG----VVYN 285
+ L M+ D +PD+ S N++I G N ++ AL I+ ++G V N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 286 YLPNSF--------------------------SYDYLIHGLCAQGRTKNARELCDEMKRK 319
L NS +Y +I G C G A+ L +M+
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 320 GFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
PS YN L+S+L G +++ + EM D +++ ++D + G A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 380 MKLLKELQNKNLI-DGYTYTKLLD 402
LL + L D +TY+KL++
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 250 IEPDIF----SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGR 305
+E D F SL+ +++ Y+ A + M + + N ++++ L+ GLC
Sbjct: 99 LETDTFINFVSLSGLLECYVQMRKTGFAFGVLALM-LKRGFAFNVYNHNILLKGLCRNLE 157
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A L EM+R +P SYN+++ E+E+ ++ EM +T+
Sbjct: 158 CGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGI 217
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
++D C+ G+ EAM LKE++ L D YT L+
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 103/263 (39%), Gaps = 26/263 (9%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQ---------EMDDVVNQM-----LATPS 168
L + K+ R Y ++ KLGA + DV M ++
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 169 FCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNT 228
Y +I F + L+ A + M+ S E +PS+ YN L ++ G
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS---ELQPSVFDYNCLLSSLCKEGS-- 544
Query: 229 YINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLP 288
++ LF++M D PD+ S N MI G + + + A + M P
Sbjct: 545 ------LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA-GLSP 597
Query: 289 NSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL 348
+ F+Y LI+ G A D+M GF P + +S++ GE ++ + +
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657
Query: 349 WEMIEKQRPVDFITYRTVLDEIC 371
++++K +D TV+D +C
Sbjct: 658 KKLVDKDIVLDKELTCTVMDYMC 680
>sp|Q7X6A5|PPR81_ARATH Pentatricopeptide repeat-containing protein At1g55630
OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1
Length = 477
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 32/296 (10%)
Query: 122 ELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
+ F W Q FRH A+ YH++ + Y+ M ++++M+ + T +N +I
Sbjct: 137 KFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIK-DGYPTTACTFNLLIC 195
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC- 240
EA L+R V V +++K S+ RP SYN + + L + I+ VY + +
Sbjct: 196 TCGEA-GLARDV-VEQFIK-SKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDG 252
Query: 241 --------------------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
L +MV DG PD+++ N ++ N AL
Sbjct: 253 FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
+ + M V P + LI GL G+ + + DE + G P Y +++
Sbjct: 313 NLLNHMREV-GVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
GE+E+ + EM EK + + TY +++ C G+ EA LLKE++++
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 24/248 (9%)
Query: 122 ELFNWASKQ---PRFRHDASTYHIM---TRKLGAA-KMYQEMDDVVNQMLATPSFCGTEA 174
+L +W +Q F D TY+I+ +LG ++Y+ +D++V + +
Sbjct: 239 KLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLY----- 293
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
YN +++ A K A+ + +M R + P + + L GK
Sbjct: 294 TYNILLHHLATGNKPLAALNLLNHM---REVGVEPGVIHFTTLIDGLSRAGK-------- 342
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E + + V G PD+ MI GYI + A +F +M LPN F+Y+
Sbjct: 343 LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEM-TEKGQLPNVFTYN 401
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
+I G C G+ K A L EM+ +G P+ Y++LV+ L G+V E + + +M+EK
Sbjct: 402 SMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Query: 355 QRPVDFIT 362
V I+
Sbjct: 462 GHYVHLIS 469
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 2/165 (1%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
L +M+ DG + N +I + D + F + +NY P SY+ ++H L
Sbjct: 174 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIK-SKTFNYRPYKHSYNAILHSL 232
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
+ K + ++M GF P +YN ++ A G+ + + L EM++ D
Sbjct: 233 LGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 292
Query: 361 ITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDGYT-YTKLLDVL 404
TY +L + + A+ LL ++ + G +T L+D L
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 29/278 (10%)
Query: 127 ASKQPRFRH------DASTYHIMTRKLGAAKMYQ-EMDDVVN---QMLATPSFCGTEALY 176
+ P F H D S RK+ ++ ++DD VN M+ + F
Sbjct: 26 GTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPF------- 78
Query: 177 NTIIYF---FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHV 233
+I+ F + K+++ V + +NL ++ +Y+IL F R +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ------- 131
Query: 234 YMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY 293
+ + +M+ G EPDI +LNS++ G+ N ++DA+ + QM V Y P+SF++
Sbjct: 132 -LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM-VEMGYQPDSFTF 189
Query: 294 DYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIE 353
+ LIHGL R A L D M KG P +Y +V+ L G+++ + L +M +
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 354 KQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ + Y T++D +C +A+ L E+ NK +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++ +++ L AF+ GK + L+ +M+ I+PDIF+ +S+I G+ + +
Sbjct: 324 PNVVTFSALIDAFVKEGK--------LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 269 HVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSY 328
+++A +F M + + PN +Y+ LI G C R EL EM ++G V ++ +Y
Sbjct: 376 RLDEAKHMFELM-ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 329 NSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
+L+ E + +M+ D +TY +LD +C G+ A+ + + LQ
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 389 KNL-IDGYTYTKLLD 402
+ D YTY +++
Sbjct: 495 SKMEPDIYTYNIMIE 509
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 48/262 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+NT+I+ + S AV + M C+P + +Y I+ RG +
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVK---GCQPDLVTYGIVVNGLCKRGD--------I 237
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMG--------VVYNYL 287
+ L K+M IEP + N++I +VNDAL +F +M V YN L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 288 --------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
PN ++ LI +G+ A +L DEM ++
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWE-MIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P +Y+SL++ ++ ++E K+++E MI K + +TY T++ C+ R E M
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEA-KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 381 KLLKELQNKNLI-DGYTYTKLL 401
+L +E+ + L+ + TYT L+
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLI 438
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 130/292 (44%), Gaps = 52/292 (17%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
A K+Y EM + + + F Y+++I F +L A ++F+ M + +C
Sbjct: 345 AEKLYDEM---IKRSIDPDIFT-----YSSLINGFCMHDRLDEAKHMFELMISK---DCF 393
Query: 209 PSIRSYNILFTAFL----------------SRG------KNTYINHVYMETIRC-----L 241
P++ +YN L F RG T + H + + C +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL------PNSFSYDY 295
FKQMV+DG+ PDI + + ++ G + V AL VV+ YL P+ ++Y+
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL-------VVFEYLQRSKMEPDIYTYNI 506
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I G+C G+ ++ +L + KG P+ +Y +++S G EE EM E+
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLDVLED 406
D TY T++ R G + +L++E+++ + D T + ++L D
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHD 618
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 45/318 (14%)
Query: 88 DTQFRCAVSELPPRFNNEELCNVMTLQ-EDPLVCLELFNWASKQPRFRHDASTYHIMTRK 146
++ + VS + P ++ V++LQ D +C+ F W K + D + + + +
Sbjct: 57 NSSLKSLVSHMNPNVASQ----VISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKL 112
Query: 147 LGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLE 206
+ ++ +Y+ V+ ++ S C E L ++Y F E R+ V+ F+ N
Sbjct: 113 IVSSGLYRVAHAVIVALIKECSRCEKEML--KLMYCFDELRE----VFGFRL-----NYP 161
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMET---------IRCLFKQMVNDGI--EPDIF 255
C S+ ++ A L G Y+ + ME R + + +G ++F
Sbjct: 162 CYSSL----LMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMF 217
Query: 256 SLNSMIKGYILSNHVN--------------DALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
+ G++L +H+ DAL++F M PNS SY LIHGLC
Sbjct: 218 MSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLC 277
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
GR + A L D+M KG PS+++Y L+ AL G +++ EMI + +
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 362 TYRTVLDEICRRGRAGEA 379
TY ++D +CR G+ EA
Sbjct: 338 TYTVLIDGLCRDGKIEEA 355
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I+ E +L A F C+PS R+Y +L A RG I+ +
Sbjct: 269 YSILIHGLCEVGRLEEA---FGLKDQMGEKGCQPSTRTYTVLIKALCDRG---LIDKAFN 322
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
LF +M+ G +P++ + +I G + +A + +M V P+ +Y+
Sbjct: 323 -----LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM-VKDRIFPSVITYNA 376
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C GR A EL M+++ P+ +++N L+ L G+ + V L M++
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
D ++Y ++D +CR G A KLL + ++ D T+T +++
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 132/319 (41%), Gaps = 47/319 (14%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L++F+ SK+ ++ +Y I+ L +E + +QM T Y +I
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT-YTVLI 308
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ + +A +F M C+P++ +Y +L GK N V
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRG---CKPNVHTYTVLIDGLCRDGKIEEANGVC------ 359
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDA---------------LRIFHQM----- 280
++MV D I P + + N++I GY V A +R F+++
Sbjct: 360 --RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 281 --GVVYNYL------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
G Y + P+ SY+ LI GLC +G A +L M P
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCL 477
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
++ ++++A G+ + L M+ K +D +T T++D +C+ G+ +A+ +L+ L
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 387 -QNKNLIDGYTYTKLLDVL 404
+ + L ++ +LD+L
Sbjct: 538 VKMRILTTPHSLNVILDML 556
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 249 GIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKN 308
G+ P + + +++ G I S + + RI M + LPN + Y +I+GLC GR +
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL-SGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A +L M+ G P+ +Y +V NG+++ ++ + M+E+ ++ Y ++L
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/249 (18%), Positives = 88/249 (35%), Gaps = 45/249 (18%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I ++ A +K + + + P ++ + AF +GK
Sbjct: 444 YNVLIDGLCREGHMNTA---YKLLSSMNCFDIEPDCLTFTAIINAFCKQGK--------A 492
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIF------------HQMGVV 283
+ M+ GI D + ++I G DAL I H + V+
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 284 YNYL----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
+ L P+ +Y L+ GL G + + + MK G
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P+ Y +++ L G VEE K L M + + +TY ++ G+ A++
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672
Query: 382 LLKELQNKN 390
++ + +
Sbjct: 673 TVRAMVERG 681
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 65/266 (24%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y II + ++ A + M++S P+ +Y ++ +++ GK +
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSG---VSPNHVTYTVMVKGYVNNGKLDR----AL 671
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNH----------------------VNDA 273
ET+R MV G E + +S+++G++LS +N+
Sbjct: 672 ETVR----AMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINEL 727
Query: 274 LRIFHQMG-------------------------VVYNYLPNSF----SYDYLIHGLCAQG 304
+ + Q+G +V N L + D ++ C++
Sbjct: 728 ISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKK 787
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVD---FI 361
+ EL + + GFVPS KS+ ++ L G+ E + + E++ V+ +
Sbjct: 788 KHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVL 847
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQ 387
TY L E G E + L+ +L
Sbjct: 848 TYVECLMEGDETGDCSEVIDLVDQLH 873
>sp|Q94JX6|PP391_ARATH Pentatricopeptide repeat-containing protein At5g18390,
mitochondrial OS=Arabidopsis thaliana GN=At5g18390 PE=2
SV=2
Length = 459
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII 180
L FNWA P + + Y + + L + K Y+ M ++ QM E L II
Sbjct: 95 LRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLC-FII 153
Query: 181 YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRC 240
+ + + +AV +F + + L C+ ++ YN L A + + H IR
Sbjct: 154 EQYGKNGHVDQAVELFNGV--PKTLGCQQTVDVYNSLLHALC----DVKMFHGAYALIR- 206
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+M+ G++PD + ++ G+ + + +A +M + P + D LI GL
Sbjct: 207 ---RMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSR-RGFNPPARGRDLLIEGL 262
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
G ++A+E+ +M + GFVP +++N L+ A++ +GEVE ++ + + VD
Sbjct: 263 LNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDI 322
Query: 361 ITYRTVLDEICRRGRAGEAMKLL 383
TY+T++ + + G+ EA +LL
Sbjct: 323 DTYKTLIPAVSKIGKIDEAFRLL 345
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
S ND+LR F+ +Y P S Y+ L L + + ++ ++ +MK S +
Sbjct: 88 SRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGE 147
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEK----QRPVDFITYRTVLDEICRRGRAGEAMKL 382
+ ++ NG V++ V+ L+ + K Q+ VD Y ++L +C A L
Sbjct: 148 TLCFIIEQYGKNGHVDQAVE-LFNGVPKTLGCQQTVD--VYNSLLHALCDVKMFHGAYAL 204
Query: 383 LKELQNKNL-IDGYTYTKLLD 402
++ + K L D TY L++
Sbjct: 205 IRRMIRKGLKPDKRTYAILVN 225
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 15/253 (5%)
Query: 153 YQEMDDVVN--QMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPS 210
Y+ MDD +N + + T Y+++I + S A + M + P
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---INPD 325
Query: 211 IRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV 270
+ +++ L AF+ GK +Y E MV I+P I + +S+I G+ + + +
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDE--------MVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 271 NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNS 330
++A ++F M V + P+ +Y+ LI G C R + E+ EM ++G V ++ +YN
Sbjct: 378 DEAKQMFEFM-VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 331 LVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKN 390
L+ L G+ + + EM+ P + +TY T+LD +C+ G+ +AM + + LQ
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 391 LIDG-YTYTKLLD 402
+ YTY +++
Sbjct: 497 MEPTIYTYNIMIE 509
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 32/245 (13%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF---------LSRG---KNTYINH--- 232
KL AV +F M SR PSI ++ L +A +S G +N I H
Sbjct: 61 KLDDAVALFGEMVKSRPF---PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 233 VYMETIRC------------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM 280
Y I C + +M+ G EP+I +L+S++ GY S +++A+ + QM
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 281 GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGE 340
V Y PN+ +++ LIHGL + A L D M KG P +Y +V+ L G+
Sbjct: 178 -FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 341 VEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTK 399
+ L +M + + + Y T++D +C+ +A+ L KE++ K + + TY+
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 400 LLDVL 404
L+ L
Sbjct: 297 LISCL 301
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT+I F + +++ + VF+ M + R L + +YNIL G +
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREM-SQRGL--VGNTVTYNILIQGLFQAGDCDMAQEI-- 453
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL------PN 289
FK+MV+DG+ P+I + N+++ G + + A+ VV+ YL P
Sbjct: 454 ------FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM-------VVFEYLQRSKMEPT 500
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLW 349
++Y+ +I G+C G+ ++ +L + KG P +YN+++S G EE
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 350 EMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQN 388
EM E + Y T++ R G + +L+KE+++
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 46/262 (17%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ +I F +L A+ V M L P+I + + L N Y + +
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKM---MKLGYEPNIVTLSSLL--------NGYCHSKRI 167
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------------GVV 283
L QM G +P+ + N++I G L N ++A+ + +M GVV
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 227
Query: 284 YNYL----------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
N L P Y+ +I GLC +A L EM+ KG
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
P+ +Y+SL+S L G + + L +MIE++ D T+ ++D + G+ EA K
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 382 LLKELQNKNLIDG-YTYTKLLD 402
L E+ +++ TY+ L++
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLIN 369
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 121 LELFNWASKQPRFRHDASTYHIMTRKL---GAAKMYQEMDDVVNQMLA--TPSFCGTEAL 175
+E+F S Q + TY+I+ + L G M QE + +M++ P T
Sbjct: 416 MEVFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQE---IFKEMVSDGVPPNIMT--- 468
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YNT++ + KL +A+ VF+Y++ S+ P+I +YNI+ GK +
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSK---MEPTIYTYNIMIEGMCKAGK--------V 517
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E LF + G++PD+ + N+MI G+ +A +F +M LPNS Y+
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE-DGTLPNSGCYNT 576
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
LI G + + EL EM+ GF + + LV+ + +G ++++
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS 624
>sp|Q9LQQ1|PPR20_ARATH Pentatricopeptide repeat-containing protein At1g07740,
mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2
SV=1
Length = 459
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 48/323 (14%)
Query: 115 EDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEA 174
EDP L LF+ ++ FRHD +Y + KL ++ + +D ++ + C E+
Sbjct: 60 EDPEEALSLFH-QYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRC-RES 117
Query: 175 LYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY 234
L+ +I + +A + +A+ VF + + +C +I+S N L + G+
Sbjct: 118 LFMGLIQHYGKAGSVDKAIDVFHKITS---FDCVRTIQSLNTLINVLVDNGE-------- 166
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM--------GVVYNY 286
+E + F + + P+ S N +IKG++ A ++F +M V YN
Sbjct: 167 LEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNS 226
Query: 287 L--------------------------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
L PN+ ++ L+ GLC +G A++L +M+ +G
Sbjct: 227 LIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRG 286
Query: 321 FVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAM 380
P +Y L+S L G ++E L EM +++ D + Y +++ +C R EA
Sbjct: 287 CKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAY 346
Query: 381 KLLKELQNKNL-IDGYTYTKLLD 402
++L E+Q K + TY ++D
Sbjct: 347 RVLTEMQMKGCKPNAATYRMMID 369
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 69/165 (41%), Gaps = 9/165 (5%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C+P + +Y IL + RG+ ++ + L +M I+PD+ N ++
Sbjct: 287 CKPGLVNYGILMSDLGKRGR--------IDEAKLLLGEMKKRRIKPDVVIYNILVNHLCT 338
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
V +A R+ +M + PN+ +Y +I G C + + + M P+
Sbjct: 339 ECRVPEAYRVLTEMQM-KGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPA 397
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEIC 371
++ +V+ L G ++ L M +K ++ +L ++C
Sbjct: 398 TFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
>sp|Q9M1D8|PP288_ARATH Pentatricopeptide repeat-containing protein At3g60050
OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1
Length = 473
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 22/246 (8%)
Query: 122 ELFNWASKQ---PRFRHDASTYHIM---TRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL 175
+L W KQ F D TY+I+ +LG + + D +A F
Sbjct: 236 KLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFD----EMARDGFSPDSYT 291
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +++ + K A+ +MK + PS+ Y L LSR N +
Sbjct: 292 YNILLHILGKGNKPLAALTTLNHMKE---VGIDPSVLHYTTLIDG-LSRAGN-------L 340
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
E + +MV G PD+ MI GY++S ++ A +F +M V LPN F+Y+
Sbjct: 341 EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREM-TVKGQLPNVFTYNS 399
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+I GLC G + A L EM+ +G P+ Y++LVS L G++ E K + EM++K
Sbjct: 400 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Query: 356 RPVDFI 361
V +
Sbjct: 460 HYVHLV 465
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 14/280 (5%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYF 182
F W+ +Q FRH ++YH++ + Y+ M +V++M+ F T +N +I
Sbjct: 135 FFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMV-QDGFPTTARTFNLLICS 193
Query: 183 FAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLF 242
EA +A V ++MK S+ RP SYN + + L + I VY
Sbjct: 194 CGEAGLAKQA--VVQFMK-SKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVY-------- 242
Query: 243 KQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCA 302
KQM+ DG PD+ + N ++ ++ R+F +M + P+S++Y+ L+H L
Sbjct: 243 KQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARD-GFSPDSYTYNILLHILGK 301
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
+ A + MK G PS Y +L+ L+ G +E L EM++ D +
Sbjct: 302 GNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVC 361
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKN-LIDGYTYTKLL 401
Y ++ G +A ++ +E+ K L + +TY ++
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 401
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 19/231 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y I + EA + + A KY+K R P+ L + +GK Y
Sbjct: 525 YGAFISGYIEASEFASAD---KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY- 580
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFS 292
+ MV+ GI D + ++ G ++ V+DA IF +M G+ P+ FS
Sbjct: 581 -------RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA----PDVFS 629
Query: 293 YDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMI 352
Y LI+G G + A + DEM +G P+ YN L+ +GE+E+ + L EM
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMS 689
Query: 353 EKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
K + +TY T++D C+ G EA +L E++ K L+ D + YT L+D
Sbjct: 690 VKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 241 LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGL 300
+F++M GI PD+FS +I G+ ++ A IF +M V PN Y+ L+ G
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM-VEEGLTPNVIIYNMLLGGF 672
Query: 301 CAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDF 360
C G + A+EL DEM KG P++ +Y +++ +G++ E + EM K D
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 361 ITYRTVLDEICR 372
Y T++D CR
Sbjct: 733 FVYTTLVDGCCR 744
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 109/272 (40%), Gaps = 53/272 (19%)
Query: 171 GTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
G Y ++ + K+ A +F+ M R P + SY +L F G
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREM---RGKGIAPDVFSYGVLINGFSKLGN---- 642
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
M+ +F +MV +G+ P++ N ++ G+ S + A + +M V PN+
Sbjct: 643 ----MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNA 697
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNL-- 348
+Y +I G C G A L DEMK KG VP S Y +LV +VE +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 349 -----------------W-----------EMIEK---------QRPVDFITYRTVLDEIC 371
W E++ + +P D +TY ++D +C
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND-VTYNIMIDYLC 816
Query: 372 RRGRAGEAMKLLKELQNKNLIDGY-TYTKLLD 402
+ G A +L ++QN NL+ TYT LL+
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 15/229 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y T++ + L A + K M S CRP++ Y L FL N +
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASG---CRPNVVIYTTLIKTFLQ-------NSRFG 469
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
+ +R L K+M GI PDIF NS+I G + +++A +M V N L PN+F+Y
Sbjct: 470 DAMRVL-KEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM--VENGLKPNAFTYG 526
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
I G +A + EM+ G +P+ L++ G+V E M+++
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
D TY +++ + + + +A ++ +E++ K + D ++Y L++
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 213 SYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVND 272
+Y++L L +G+N + + L +MV+ GI + + I +
Sbjct: 314 TYSLLIDGLL-KGRNA-------DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEK 365
Query: 273 ALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLV 332
A +F M + +P + +Y LI G C + + EL EMK++ V S +Y ++V
Sbjct: 366 AKALFDGM-IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 333 SALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
+ +G+++ + EMI + + Y T++ + R G+AM++LKE++ + +
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 393 -DGYTYTKLL 401
D + Y L+
Sbjct: 485 PDIFCYNSLI 494
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
ME + LF M+ G+ P + S+I+GY +V + +M N + + ++Y
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYG 421
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ G+C+ G A + EM G P+ Y +L+ N + ++ L EM E+
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
D Y +++ + + R EA L E+ L + +TY +
Sbjct: 482 GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 118/326 (36%), Gaps = 76/326 (23%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQM----LATPSFCGTEALYNTIIYFFAEARKLSR 191
DA TY ++ L + +++ +M +A F Y +I F++ + +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFS-----YGVLINGFSKLGNMQK 645
Query: 192 AVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRG--------------KNTYINHVYMET 237
A +F M P++ YN+L F G K + N V T
Sbjct: 646 ASSIFDEMVEEG---LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 238 I---RC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ----- 279
I C LF +M G+ PD F +++ G N V A+ IF
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 280 ------MGVVYNYL--------------------------PNSFSYDYLIHGLCAQGRTK 307
+ N++ PN +Y+ +I LC +G +
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
A+EL +M+ +P+ +Y SL++ G E E I D I Y ++
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 368 DEICRRGRAGEAMKLLKELQNKNLID 393
+ + G +A+ L+ ++ KN +D
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVD 908
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 85/206 (41%), Gaps = 15/206 (7%)
Query: 172 TEALYNTII-YFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYI 230
+ A +N +I + F + + + + M S + +P+ +YNI+ G
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN---- 820
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNS 290
+E + LF QM N + P + + S++ GY + +F + + P+
Sbjct: 821 ----LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE-AIAAGIEPDH 875
Query: 291 FSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP-----SSKSYNSLVSALALNGEVEETV 345
Y +I+ +G T A L D+M K V S + +L+S A GE+E
Sbjct: 876 IMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAE 935
Query: 346 KNLWEMIEKQRPVDFITYRTVLDEIC 371
K + M+ Q D T +++E C
Sbjct: 936 KVMENMVRLQYIPDSATVIELINESC 961
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 152/417 (36%), Gaps = 93/417 (22%)
Query: 66 LSRSSSRGVGKRSKADSKPA--LDDTQFRCAV--SELPPRFNNEELCNVMTLQ--EDPLV 119
L RS S V K S A ++ A L +R + S L N E + +V+ + +DP
Sbjct: 20 LFRSFSVNVEKLSDASAEIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSK 79
Query: 120 CLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQML--------------- 164
L FNW Q ++ + L +++ VV +M+
Sbjct: 80 LLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVR 139
Query: 165 ATPSFCGTE---ALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAF 221
+ F G L+ + + + AV+VF +S LE P + +L A
Sbjct: 140 CSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFS---SSMGLELVPRLSRCKVLLDAL 196
Query: 222 LSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHV----------- 270
L + VY K MV + D+ + + +I + + +V
Sbjct: 197 LRWNRLDLFWDVY--------KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTE 248
Query: 271 ----------NDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKG 320
+ AL++ M + +P ++YD LI GLC R ++A+ L EM G
Sbjct: 249 KEFRTATLNVDGALKLKESM-ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307
Query: 321 FVPSSKSYNSLVSAL-------ALNGEVEETV---------------------------K 346
+ +Y+ L+ L A G V E V K
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
Query: 347 NLWE-MIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLL 401
L++ MI Y ++++ CR + +LL E++ +N+ I YTY ++
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Score = 33.1 bits (74), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 34/205 (16%)
Query: 226 KNTYINHVYMETIRCL--FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQ-MGV 282
+N + V+ +RC F +DG+ +F + + GYI ++ +A+ +F MG+
Sbjct: 126 RNWPVAEVWSSIVRCSQEFVGKSDDGV---LFGI--LFDGYIAKGYIEEAVFVFSSSMGL 180
Query: 283 VYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVE 342
+P L+ L R ++ M + V K+Y+ L+ A G V+
Sbjct: 181 --ELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQ 238
Query: 343 ETVKNLWEMIEKQR----------------------PVDFITYRTVLDEICRRGRAGEAM 380
L++ ++ R P+ + TY ++D +C+ R +A
Sbjct: 239 LGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY-TYDVLIDGLCKIKRLEDAK 297
Query: 381 KLLKELQNKNL-IDGYTYTKLLDVL 404
LL E+ + + +D +TY+ L+D L
Sbjct: 298 SLLVEMDSLGVSLDNHTYSLLIDGL 322
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 127/245 (51%), Gaps = 10/245 (4%)
Query: 143 MTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS 202
+ R L AKM++E+ ++ N +L++ + +++ FA++ + +A F+ ++ S
Sbjct: 45 IARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVR-S 103
Query: 203 RNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIK 262
R E +PS+ YN+L + + + +++ +Y + + C GI P ++ N +I+
Sbjct: 104 RFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLC--------GIAPQTYTFNLLIR 155
Query: 263 GYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFV 322
S+ V+ A +F +M PN F++ L+ G C G T EL + M+ G +
Sbjct: 156 ALCDSSCVDAARELFDEM-PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVL 214
Query: 323 PSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKL 382
P+ YN++VS+ G +++ K + +M E+ D +T+ + + +C+ G+ +A ++
Sbjct: 215 PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274
Query: 383 LKELQ 387
+++
Sbjct: 275 FSDME 279
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 124/246 (50%), Gaps = 22/246 (8%)
Query: 145 RKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRN 204
+ L A++++ +M+ +++ L P YN ++ F + L A +F+ ++ + +
Sbjct: 267 KVLDASRIFSDME--LDEYLGLPR--PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 205 LECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGY 264
L S++SYNI + GK + ET+ KQM + GI P I+S N ++ G
Sbjct: 323 L---ASLQSYNIWLQGLVRHGK-----FIEAETV---LKQMTDKGIGPSIYSYNILMDGL 371
Query: 265 ILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGF 321
++DA I M GV P++ +Y L+HG C+ G+ A+ L EM R
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVC----PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+P++ + N L+ +L G + E + L +M EK +D +T ++D +C G +A++
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 382 LLKELQ 387
++K ++
Sbjct: 488 IVKGMR 493
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
N I+ + +L +A+ + K M+ + +A L N+YI V
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMR---------------VHGSAALGNLGNSYIGLVD-- 512
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYL 296
++ + PD+ + ++++ G + +A +F +M + P+S +Y+
Sbjct: 513 ------DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM-MGEKLQPDSVAYNIF 565
Query: 297 IHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQR 356
IH C QG+ +A + +M++KG S ++YNSL+ L + ++ E + EM EK
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 357 PVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
+ TY T + +C + +A LL E+ KN+
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 107/278 (38%), Gaps = 47/278 (16%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYV 195
D TY + L A + E ++ +M+ + A YN I+ F + K+S A
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVA-YNIFIHHFCKQGKISSA--- 578
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
F+ +K+ C S+ +YN L + N ++ I L +M GI P+I
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIK------NQIF--EIHGLMDEMKEKGISPNIC 630
Query: 256 SLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC-------------- 301
+ N+ I+ V DA + +M + N PN FS+ YLI C
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEM-MQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFET 689
Query: 302 --------------------AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEV 341
A G+ A EL + + +GF + Y LV +L E+
Sbjct: 690 AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDEL 749
Query: 342 EETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEA 379
E L +MI++ D V+D + + G EA
Sbjct: 750 EVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 11/231 (4%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLEC-RPSIRSYNILFTAFLSRGKNTYINHVY 234
+N+ I + K+ A +F M+ L RP+ +YN++ F G
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVG--------L 306
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+E + LF+ + + + S N ++G + +A + QM P+ +SY+
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM-TDKGIGPSIYSYN 365
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
L+ GLC G +A+ + MKR G P + +Y L+ G+V+ L EM+
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
+ T +L + + GR EA +LL+++ K +D T ++D L
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 9/166 (5%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C P + +Y+ L G+ + LF +M+ + ++PD + N I +
Sbjct: 520 CLPDLITYSTLLNGLCKAGR--------FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCK 571
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
++ A R+ M + + +Y+ LI GL + + L DEMK KG P+
Sbjct: 572 QGKISSAFRVLKDMEKKGCH-KSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICR 372
+YN+ + L +VE+ L EM++K + +++ +++ C+
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 139/325 (42%), Gaps = 50/325 (15%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVN-------------------QM 163
F + S QP FR TY ++ R L +M+ E ++ +M
Sbjct: 104 FFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEM 163
Query: 164 LATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKN--------------SRNLECRP 209
TP CG L + ++ + + + A+ F+ + R ++ P
Sbjct: 164 RVTP-MCG--FLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNP 220
Query: 210 SIRSYNILFTAFLSRG--KNTYINHVYMETI---------RCLFKQMVNDGIEPDIFSLN 258
+ + + L G N Y+ ++ M + +F ++ ++P + S N
Sbjct: 221 TGTIWG-FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFN 279
Query: 259 SMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKR 318
++I GY ++++ R+ HQM P+ F+Y LI+ LC + + A L DEM +
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTR-PDVFTYSALINALCKENKMDGAHGLFDEMCK 338
Query: 319 KGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGE 378
+G +P+ + +L+ + NGE++ ++ +M+ K D + Y T+++ C+ G
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 379 AMKLLKELQNKNL-IDGYTYTKLLD 402
A ++ + + L D TYT L+D
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLID 423
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFL-SRGKNTYINHVY 234
Y+ +I + K+ A +F M C+ + +++FT + +N I
Sbjct: 313 YSALINALCKENKMDGAHGLFDEM-------CKRGLIPNDVIFTTLIHGHSRNGEI---- 361
Query: 235 METIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYD 294
+ ++ +++M++ G++PDI N+++ G+ + + A I M + P+ +Y
Sbjct: 362 -DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM-IRRGLRPDKITYT 419
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
LI G C G + A E+ EM + G +++LV + G V + + L EM+
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVL 404
D +TY ++D C++G A KLLKE+Q+ + TY LL+ L
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 116/285 (40%), Gaps = 34/285 (11%)
Query: 129 KQPRFRHDASTYHIMTRKL-------GAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIY 181
++ R R D TY + L GA ++ EM + ++ T+I+
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM--------CKRGLIPNDVIFTTLIH 353
Query: 182 FFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCL 241
+ ++ ++ M S+ L+ P I YN L F G + R +
Sbjct: 354 GHSRNGEIDLMKESYQKML-SKGLQ--PDIVLYNTLVNGFCKNGD--------LVAARNI 402
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM---GVVYNYLPNSFSYDYLIH 298
M+ G+ PD + ++I G+ V AL I +M G+ + + + L+
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV----GFSALVC 458
Query: 299 GLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPV 358
G+C +GR +A EM R G P +Y ++ A G+ + K L EM
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 359 DFITYRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+TY +L+ +C+ G+ A LL + N ++ D TY LL+
Sbjct: 519 SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Score = 35.4 bits (80), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 196 FKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIF 255
FK +K ++ PS+ +YN+L G+ M+ L M+N G+ PD
Sbjct: 505 FKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ--------MKNADMLLDAMLNIGVVPDDI 556
Query: 256 SLNSMIKGYILSNHVNDALRIFH--QMGVVYN 285
+ N++++G+ H N + R ++G+V +
Sbjct: 557 TYNTLLEGH--HRHANSSKRYIQKPEIGIVAD 586
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-----YN 177
F WA+++ F HD+ TY+ M L + ++ M V+ +M GT+ L +
Sbjct: 181 FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-------GTKGLLTMETFT 233
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSR------NLEC------RPSI-RSYNILFTAFLSR 224
+ FA A++ +AV +F+ MK + + C R + + +LF R
Sbjct: 234 IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER 293
Query: 225 GKNTYINHVYMETIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ + + C ++ M++ G++PDI + N M++G + S +DA+
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 353
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
++FH M PN SY +I C Q + A E D+M G P + Y L++
Sbjct: 354 KLFHVMKS-KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+++ + L EM EK P D TY ++
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 108/280 (38%), Gaps = 57/280 (20%)
Query: 149 AAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECR 208
AA+++ +D+++Q L P +N ++ +RK S A+ +F MK+
Sbjct: 317 AARIW---NDMIDQGL-KPDIVA----HNVMLEGLLRSRKKSDAIKLFHVMKSKGPC--- 365
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSN 268
P++RSY I+ F + MET F MV+ G++PD +I G+
Sbjct: 366 PNVRSYTIMIRDFCKQSS--------METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK 417
Query: 269 HVNDALRIFHQM--------GVVYNYL--------------------------PNSFSYD 294
++ + +M G YN L P+ +++
Sbjct: 418 KLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFN 477
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ + R + +EM +KG P SY L+ L G+ E + L EM++K
Sbjct: 478 MIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDK 537
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
I Y + R G+ ++ +EL + G
Sbjct: 538 GMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAKFSG 573
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGL--CAQGRTKNARELCDEMKRKGFVPSSKS 327
+++ + M V + + S+D ++ L R R C +R+GF S++
Sbjct: 138 IDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRT 197
Query: 328 YNSLVSALALNGEVEETVKNLWEM 351
YNS++S LA + E V L EM
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEM 221
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 144 TRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNS- 202
TR L +A Y++ V+ +M+ F + Y+ ++ + A K+ A +F+ MK
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQ-GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 203 -------------------------------RNLECRPSIRSYNILFTAFLSRGKNTYIN 231
R + C P++ +Y L A+L K +Y N
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573
Query: 232 HVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM------GVVYN 285
LF+ M+++G P+I + +++I G+ + V A +IF +M V
Sbjct: 574 E--------LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 286 YL---------PNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
Y PN +Y L+ G C R + AR+L D M +G P+ Y++L+ L
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 337 LNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL-KELQNKNLIDGY 395
G+++E + EM E P TY +++D + R A K+L K L+N +
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 745
Query: 396 TYTKLLDVL 404
YT+++D L
Sbjct: 746 IYTEMIDGL 754
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 20/279 (7%)
Query: 136 DASTYHIMTRKLGAAKMYQEMDDVVNQML---ATPSFCGTEALYNTIIYFFAEARKLSRA 192
D TY IM A + ++ N+M TP+ Y +I+ + +A+K+S A
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV----VTYTALIHAYLKAKKVSYA 572
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVY--------METIRCLFKQ 244
+F+ M + C P+I +Y+ L G+ ++ + + FKQ
Sbjct: 573 NELFETMLSEG---CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 245 MVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQG 304
++ P++ + +++ G+ S+ V +A ++ M + PN YD LI GLC G
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM-EGCEPNQIVYDALIDGLCKVG 688
Query: 305 RTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYR 364
+ A+E+ EM GF + +Y+SL+ + K L +M+E + + Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 365 TVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLD 402
++D +C+ G+ EA KL++ ++ K + TYT ++D
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 55/260 (21%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNL-------------ECRPSIRSYNILFTAFL 222
Y+ +I +A ++ +A +F+ M S+++ RP++ +Y L F
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 223 SRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQM-- 280
+ +E R L M +G EP+ +++I G +++A + +M
Sbjct: 651 KSHR--------VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE 702
Query: 281 ----GVVYNY----------------------------LPNSFSYDYLIHGLCAQGRTKN 308
+Y Y PN Y +I GLC G+T
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 309 ARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLD 368
A +L M+ KG P+ +Y +++ + G++E ++ L M K +++TYR ++D
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 369 EICRRGRAGEAMKLLKELQN 388
C+ G A LL+E++
Sbjct: 823 HCCKNGALDVAHNLLEEMKQ 842
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 28/280 (10%)
Query: 133 FRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRA 192
F D Y + L A +++E D +N+M AT Y+T++ ++L R
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV-VTYSTLLCGCLNKKQLGRC 356
Query: 193 VYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEP 252
V M C PS + +N L A+ + G ++Y L K+MV G P
Sbjct: 357 KRVLNMMMMEG---CYPSPKIFNSLVHAYCTSGDHSYAYK--------LLKKMVKCGHMP 405
Query: 253 DIFSLNSMI------KGYILSNHVNDALRIFHQM---GVVYNYL-PNSFSYDYLIHGLCA 302
N +I K + + ++ A + + +M GVV N + +SF+ LC+
Sbjct: 406 GYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT-----RCLCS 460
Query: 303 QGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFIT 362
G+ + A + EM +GF+P + +Y+ +++ L ++E EM D T
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 363 YRTVLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLL 401
Y ++D C+ G +A K E++ + TYT L+
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI 560
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 134/333 (40%), Gaps = 23/333 (6%)
Query: 74 VGKRSKADSKPALDDTQFRCA---VSELPPRFNNEELCNVMTLQEDPLVCLELFNWASKQ 130
+ R+ AD+ +DD R + + + + + + V+ L P + F WA +Q
Sbjct: 99 IDARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQ 158
Query: 131 PRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTIIYFFAEARKLS 190
++H A Y+ + + + ++ + Q+ E L N ++ S
Sbjct: 159 IGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFL-NVLVRKHCRNGSFS 217
Query: 191 RAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGI 250
A+ +K+ R RPS +YN L AFL + +++ + ++M +
Sbjct: 218 IALEELGRLKDFRF---RPSRSTYNCLIQAFLKADR--------LDSASLIHREMSLANL 266
Query: 251 EPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNAR 310
D F+L +AL + N++P++ Y LI GLC + A
Sbjct: 267 RMDGFTLRCFAYSLCKVGKWREALTLVE----TENFVPDTVFYTKLISGLCEASLFEEAM 322
Query: 311 ELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWE--MIEKQRPVDFITYRTVLD 368
+ + M+ +P+ +Y++L+ LN + K + M+E P I + +++
Sbjct: 323 DFLNRMRATSCLPNVVTYSTLLCG-CLNKKQLGRCKRVLNMMMMEGCYPSPKI-FNSLVH 380
Query: 369 EICRRGRAGEAMKLLKELQNKNLIDGYTYTKLL 401
C G A KLLK++ + GY +L
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 111/286 (38%), Gaps = 59/286 (20%)
Query: 146 KLGAAKMYQEMDDVVNQMLATPSFCGTEALYNTII--YFFAEARKLSRAVYVFKYMKNSR 203
K+G QE V ++ F T Y+++I YF + + L+ V + K ++NS
Sbjct: 686 KVGKLDEAQE----VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV-LSKMLENS- 739
Query: 204 NLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKG 263
C P++ Y + GK + Y L + M G +P++ + +MI G
Sbjct: 740 ---CAPNVVIYTEMIDGLCKVGKT---DEAYK-----LMQMMEEKGCQPNVVTYTAMIDG 788
Query: 264 YILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVP 323
+ + + L + +MG PN +Y LI C G A L +EMK+ +
Sbjct: 789 FGMIGKIETCLELLERMGS-KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 324 SSKSYNSLVSALALNGEVEETVKNLWE-------------------MIEKQRP------- 357
+ Y ++ N E E++ L E +I+ QR
Sbjct: 848 HTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLL 905
Query: 358 ----------VDFI-TYRTVLDEICRRGRAGEAMKLLKELQNKNLI 392
VD+ TY ++++ +C + A +L E+ K +I
Sbjct: 906 EEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 231 NHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPN- 289
N ++E++ L ++ D P + +I I + + ALR+ ++ L +
Sbjct: 860 NKEFIESLG-LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918
Query: 290 SFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETV 345
S +Y+ LI LC + + A +L EM +KG +P +S+ SL+ L N ++ E +
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 87/230 (37%), Gaps = 42/230 (18%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K+ + +K M+ C+P++ +Y + F GK +ET L ++M +
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK--------IETCLELLERMGS 807
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY----------------------- 284
G+ P+ + +I + ++ A + +M +
Sbjct: 808 KGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESL 867
Query: 285 ---------NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMK--RKGFVPSSKSYNSLVS 333
+ P Y LI L R + A L +E+ V S +YNSL+
Sbjct: 868 GLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIE 927
Query: 334 ALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLL 383
+L L +VE + EM +K + ++ +++ + R + EA+ LL
Sbjct: 928 SLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
>sp|Q9LUD6|PP230_ARATH Pentatricopeptide repeat-containing protein At3g14580,
mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2
SV=1
Length = 405
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 13/282 (4%)
Query: 106 ELCNVMTLQEDPLVCLELFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQM-L 164
E+ + +DP L + SK+ ++ S Y +M K G AKMY E+++V+ + L
Sbjct: 64 EVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKL 123
Query: 165 ATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSR 224
E YN + + A +++RA+ + M + C PS +S+N +
Sbjct: 124 EKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPD---FGCWPSSKSFNFIL------ 174
Query: 225 GKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVY 284
N ++ + I +F G+E D LN +IKG S ++ AL++ +
Sbjct: 175 --NLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQK 232
Query: 285 NYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEET 344
+ PN ++ LI G C +G+ + A +L + M+++ P + ++N L+S L G VEE
Sbjct: 233 SR-PNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEG 291
Query: 345 VKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+ L M K + TY+ VL + + R EA +++ ++
Sbjct: 292 IDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQM 333
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 119/220 (54%), Gaps = 17/220 (7%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
K A+ +F+ M +SR L P++ ++ LF+A +++ K + + L KQM
Sbjct: 68 KADDAIDLFRDMIHSRPL---PTVIDFSRLFSA-IAKTKQ-------YDLVLALCKQMEL 116
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVV--YNYLPNSFSYDYLIHGLCAQGR 305
GI ++++L+ MI + + A F MG + Y PN+ ++ LI+GLC +GR
Sbjct: 117 KGIAHNLYTLSIMINCFCRCRKLCLA---FSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 306 TKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRT 365
A EL D M G P + N+LV+ L L+G+ E + + +M+E + +TY
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
VL+ +C+ G+ AM+LL++++ +N+ +D Y+ ++D L
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 108/216 (50%), Gaps = 12/216 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
YN +I F A + + + M + P++ ++++L +F+ GK +
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRK---INPNVVTFSVLIDSFVKEGK--------L 349
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
L K+M++ GI PD + S+I G+ NH++ A ++ M V PN +++
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM-VSKGCDPNIRTFNI 408
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI+G C R + EL +M +G V + +YN+L+ G++ + EM+ ++
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL 391
P + +TY+ +LD +C G + +A+++ ++++ +
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 48/262 (18%)
Query: 177 NTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYME 236
+ +I F RKL A F M L P+ +++ L G+ + E
Sbjct: 127 SIMINCFCRCRKLCLA---FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS-------E 176
Query: 237 TIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSY--- 293
+ L +MV G +PD+ ++N+++ G LS +A+ + +M V Y PN+ +Y
Sbjct: 177 ALE-LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM-VEYGCQPNAVTYGPV 234
Query: 294 --------------------------------DYLIHGLCAQGRTKNARELCDEMKRKGF 321
+I GLC G NA L +EM+ KG
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
Query: 322 VPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMK 381
+ +YN L+ G ++ K L +MI+++ + +T+ ++D + G+ EA +
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 382 LLKELQNKNLI-DGYTYTKLLD 402
L KE+ ++ + D TYT L+D
Sbjct: 355 LHKEMIHRGIAPDTITYTSLID 376
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 13/232 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
+N +I + +A ++ + +F+ M + R + +YN L F GK +
Sbjct: 406 FNILINGYCKANRIDDGLELFRKM-SLRGV--VADTVTYNTLIQGFCELGK--------L 454
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ LF++MV+ + P+I + ++ G + AL IF ++ L Y+
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI-YNI 513
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
+IHG+C + +A +L + KG P K+YN ++ L G + E +M E
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVLED 406
D TY ++ G A +++KL++EL+ +D T ++D+L D
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 105/233 (45%), Gaps = 13/233 (5%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y+ II + L A +F M+ +I +YNIL F + G+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMK---GITTNIITYNILIGGFCNAGR--------W 314
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDY 295
+ L + M+ I P++ + + +I ++ + +A + +M + P++ +Y
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM-IHRGIAPDTITYTS 373
Query: 296 LIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ 355
LI G C + A ++ D M KG P+ +++N L++ +++ ++ +M +
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 356 RPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG-YTYTKLLDVLEDD 407
D +TY T++ C G+ A +L +E+ ++ + TY LLD L D+
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 209 PSIRSYNILFTAFLSRGKNTYINHVYMETIR-----------------CL---------- 241
P++ +Y+ L AF+ GK ++ E +R CL
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 242 FKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLC 301
F MV+ G D+ S N++I G+ + V D +++F +M + N+ +Y+ LI G
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGLVSNTVTYNTLIQGFF 376
Query: 302 AQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFI 361
G A+E +M G P +YN L+ L NGE+E+ + +M +++ +D +
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 362 TYRTVLDEICRRGRAGEAMKLLKELQNKNL-IDGYTYTKLLDVL 404
TY TV+ +C+ G+ EA L L K L D TYT ++ L
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 10/195 (5%)
Query: 208 RPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILS 267
+P I +YN + + K +N + FK++ GI P++ + +++ G S
Sbjct: 187 KPDIVAYNAIIDSLC---KTKRVNDAFD-----FFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 268 NHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKS 327
+ +DA R+ M + PN +Y L+ G+ A+EL +EM R P +
Sbjct: 239 SRWSDAARLLSDM-IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 328 YNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKELQ 387
Y+SL++ L L+ ++E + M+ K D ++Y T+++ C+ R + MKL +E+
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 388 NKNLI-DGYTYTKLL 401
+ L+ + TY L+
Sbjct: 358 QRGLVSNTVTYNTLI 372
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 109/218 (50%), Gaps = 17/218 (7%)
Query: 188 KLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVN 247
KL+ A+ +F M SR PSI +N L +A + K + + L K+M
Sbjct: 65 KLNDAIDLFSDMVKSRPF---PSIVDFNRLLSAIVKLKK--------YDVVISLGKKMEV 113
Query: 248 DGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTK 307
GI D+++ N +I + V+ AL I +M + Y P+ + L++G C + R
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKM-LKLGYEPDRVTIGSLVNGFCRRNRVS 172
Query: 308 NARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQ--RPVDFITYRT 365
+A L D+M G+ P +YN+++ +L V + + ++ IE++ RP + +TY
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF-DFFKEIERKGIRP-NVVTYTA 230
Query: 366 VLDEICRRGRAGEAMKLLKELQNKNLI-DGYTYTKLLD 402
+++ +C R +A +LL ++ K + + TY+ LLD
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Query: 207 CRPSIRSYNILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYIL 266
C + SYN L F + +E LF++M G+ + + N++I+G+
Sbjct: 326 CLADVVSYNTLINGFCKAKR--------VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 267 SNHVNDALRIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSK 326
+ V+ A F QM + P+ ++Y+ L+ GLC G + A + ++M+++
Sbjct: 378 AGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 327 SYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRGRAGEAMKLLKEL 386
+Y +++ + G+VEE + K D +TY T++ +C +G E L ++
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 387 QNKNLI 392
+ + L+
Sbjct: 497 KQEGLM 502
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 158 DVVNQM--LATPSFCGTEAL-YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSY 214
D NQM L C + + YNT+I F +A+++ + +F+ M + R L + +Y
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLV--SNTVTY 368
Query: 215 NILFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
N L F G ++ + F QM GI PDI++ N ++ G + + AL
Sbjct: 369 NTLIQGFFQAGD--------VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
IF M L + +Y +I G+C G+ + A L + KG P +Y +++S
Sbjct: 421 VIFEDMQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 335 LALNGEVEET 344
L G + E
Sbjct: 480 LCTKGLLHEV 489
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 123 LFNWASKQPRFRHDASTYHIMTRKLGAAKMYQEMDDVVNQMLATPSFCGTEAL-----YN 177
F WA+++ F HD+ TY+ M L + ++ M V+ +M GT+ L +
Sbjct: 180 FFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-------GTKGLLTMETFT 232
Query: 178 TIIYFFAEARKLSRAVYVFKYMKNSR------NLEC------RPSI-RSYNILFTAFLSR 224
+ FA A++ +AV +F+ MK + + C R + + +LF R
Sbjct: 233 IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER 292
Query: 225 GKNTYINHVYMETIRC----------LFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDAL 274
+ + + C ++ M++ G++PDI + N M++G + S +DA+
Sbjct: 293 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 352
Query: 275 RIFHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSA 334
++FH M PN SY +I C Q + A E D+M G P + Y L++
Sbjct: 353 KLFHVMKS-KGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Query: 335 LALNGEVEETVKNLWEMIEKQRPVDFITYRTVL 367
+++ + L EM EK P D TY ++
Sbjct: 412 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 444
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 18/220 (8%)
Query: 176 YNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNILFTAFLSRGKNTYINHVYM 235
Y +I F + + A+ F M +S +P Y L T F ++ K +
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDS---GLQPDAAVYTCLITGFGTQKK--------L 418
Query: 236 ETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRIFHQMGVVYNYL-PNSFSYD 294
+T+ L K+M G PD + N++IK RI+++M + N + P+ +++
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM--IQNEIEPSIHTFN 476
Query: 295 YLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEK 354
++ + R + DEM +KG P SY L+ L G+ E + L EM++K
Sbjct: 477 MIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 536
Query: 355 QRPVDFITYRTVLDEICRRGRAGEAMKLLKELQNKNLIDG 394
I Y + R G+ ++ +EL + G
Sbjct: 537 GMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAKFSG 572
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 17/186 (9%)
Query: 157 DDVVNQMLATPSFCGTEALYNTIIYFFAEARKLSRAVYVFKYMKNSRNLECRPSIRSYNI 216
DD+V+ L + A+Y +I F +KL + K M+ + P ++YN
Sbjct: 391 DDMVDSGLQPDA-----AVYTCLITGFGTQKKLDTVYELLKEMQEKGH---PPDGKTYNA 442
Query: 217 LFTAFLSRGKNTYINHVYMETIRCLFKQMVNDGIEPDIFSLNSMIKGYILSNHVNDALRI 276
L ++ + +Y +M+ + IEP I + N ++K Y ++ + +
Sbjct: 443 LIKLMANQKMPEHGTRIY--------NKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAV 494
Query: 277 FHQMGVVYNYLPNSFSYDYLIHGLCAQGRTKNARELCDEMKRKGFVPSSKSYNSLVSALA 336
+ +M + P+ SY LI GL ++G+++ A +EM KG YN +
Sbjct: 495 WDEM-IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFH 553
Query: 337 LNGEVE 342
G+ E
Sbjct: 554 RGGQPE 559
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 270 VNDALRIFHQMGVVYNYLPNSFSYDYLIHGL--CAQGRTKNARELCDEMKRKGFVPSSKS 327
+++ + M V + + S+D ++ L R R C +R+GF S++
Sbjct: 137 IDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRT 196
Query: 328 YNSLVSALALNGEVEETVKNLWEM 351
YNS++S LA + E V L EM
Sbjct: 197 YNSMMSILAKTRQFETMVSVLEEM 220
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,467,974
Number of Sequences: 539616
Number of extensions: 5893338
Number of successful extensions: 19527
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 14951
Number of HSP's gapped (non-prelim): 2150
length of query: 417
length of database: 191,569,459
effective HSP length: 120
effective length of query: 297
effective length of database: 126,815,539
effective search space: 37664215083
effective search space used: 37664215083
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)