Query 014863
Match_columns 417
No_of_seqs 479 out of 1962
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 19:10:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014863.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014863hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fr7_A Putative ketol-acid red 100.0 4.4E-81 1.5E-85 649.1 26.5 345 68-412 11-356 (525)
2 3ulk_A Ketol-acid reductoisome 100.0 1.8E-75 6.2E-80 598.4 27.3 314 71-416 2-331 (491)
3 1np3_A Ketol-acid reductoisome 100.0 1.3E-39 4.4E-44 324.7 23.0 281 106-409 12-298 (338)
4 3tri_A Pyrroline-5-carboxylate 100.0 8.1E-32 2.8E-36 261.8 19.6 221 112-366 4-235 (280)
5 3gt0_A Pyrroline-5-carboxylate 100.0 1.2E-29 4.1E-34 240.5 16.0 221 112-367 3-234 (247)
6 2izz_A Pyrroline-5-carboxylate 99.9 5.1E-24 1.7E-28 210.1 22.3 222 112-366 23-257 (322)
7 2rcy_A Pyrroline carboxylate r 99.9 6.1E-22 2.1E-26 187.4 20.6 213 112-366 5-227 (262)
8 1yqg_A Pyrroline-5-carboxylate 99.9 1E-21 3.4E-26 186.0 19.9 217 112-366 1-225 (263)
9 2ahr_A Putative pyrroline carb 99.9 9E-22 3.1E-26 186.5 18.7 217 111-366 3-226 (259)
10 3c24_A Putative oxidoreductase 99.8 4E-20 1.4E-24 178.4 19.8 211 111-352 11-241 (286)
11 2g5c_A Prephenate dehydrogenas 99.8 7.9E-21 2.7E-25 182.1 11.7 260 111-406 1-275 (281)
12 3b1f_A Putative prephenate deh 99.8 1.6E-20 5.6E-25 180.6 13.8 231 111-367 6-247 (290)
13 3ggo_A Prephenate dehydrogenas 99.8 3.1E-20 1E-24 183.5 12.7 209 112-343 34-249 (314)
14 2pv7_A T-protein [includes: ch 99.8 2.3E-18 7.8E-23 168.0 18.9 208 112-366 22-235 (298)
15 3ktd_A Prephenate dehydrogenas 99.8 1.9E-18 6.4E-23 173.3 17.8 204 112-343 9-228 (341)
16 2f1k_A Prephenate dehydrogenas 99.8 7.9E-18 2.7E-22 160.8 19.9 225 112-366 1-234 (279)
17 2i76_A Hypothetical protein; N 99.7 6.8E-17 2.3E-21 155.5 6.9 213 112-366 3-218 (276)
18 3d1l_A Putative NADP oxidoredu 99.6 4.1E-15 1.4E-19 141.2 18.0 210 108-349 8-220 (266)
19 3ulk_A Ketol-acid reductoisome 99.6 6.6E-17 2.2E-21 166.3 2.1 102 301-408 353-454 (491)
20 2dpo_A L-gulonate 3-dehydrogen 99.6 2.7E-14 9.3E-19 141.6 18.7 193 111-338 6-224 (319)
21 3obb_A Probable 3-hydroxyisobu 99.6 4.2E-15 1.4E-19 146.1 12.1 194 111-336 3-206 (300)
22 3dtt_A NADP oxidoreductase; st 99.6 8.3E-15 2.8E-19 138.8 13.2 160 105-287 14-206 (245)
23 4e12_A Diketoreductase; oxidor 99.6 6.9E-14 2.3E-18 135.2 19.0 213 111-360 4-246 (283)
24 2h78_A Hibadh, 3-hydroxyisobut 99.6 3.5E-14 1.2E-18 137.3 15.2 201 111-340 3-210 (302)
25 4huj_A Uncharacterized protein 99.6 2.1E-14 7.1E-19 134.0 12.9 154 111-287 23-192 (220)
26 3qsg_A NAD-binding phosphogluc 99.6 3E-14 1E-18 139.9 14.0 95 111-215 24-120 (312)
27 1f0y_A HCDH, L-3-hydroxyacyl-C 99.5 3.9E-13 1.3E-17 130.5 21.0 218 111-362 15-262 (302)
28 3dfu_A Uncharacterized protein 99.5 1.1E-13 3.7E-18 132.1 16.3 153 112-324 7-160 (232)
29 2ew2_A 2-dehydropantoate 2-red 99.5 1.7E-13 5.9E-18 131.4 16.9 153 111-287 3-177 (316)
30 3k6j_A Protein F01G10.3, confi 99.5 7E-13 2.4E-17 137.8 21.6 230 90-357 30-286 (460)
31 3pef_A 6-phosphogluconate dehy 99.5 1.2E-13 4E-18 133.1 14.0 200 112-340 2-208 (287)
32 3doj_A AT3G25530, dehydrogenas 99.5 1.9E-13 6.6E-18 133.7 14.7 202 110-340 20-228 (310)
33 3pdu_A 3-hydroxyisobutyrate de 99.5 1.8E-13 6E-18 131.9 14.1 201 111-340 1-208 (287)
34 3g0o_A 3-hydroxyisobutyrate de 99.5 3.9E-13 1.3E-17 130.7 14.1 200 112-340 8-216 (303)
35 2gf2_A Hibadh, 3-hydroxyisobut 99.5 1.8E-13 6.1E-18 131.4 11.5 201 112-339 1-206 (296)
36 3mog_A Probable 3-hydroxybutyr 99.5 9.8E-13 3.4E-17 137.3 17.5 214 111-360 5-244 (483)
37 2uyy_A N-PAC protein; long-cha 99.5 3.8E-13 1.3E-17 130.9 13.5 199 112-342 31-239 (316)
38 4gbj_A 6-phosphogluconate dehy 99.5 3E-13 1E-17 132.4 12.2 196 112-339 6-210 (297)
39 1zej_A HBD-9, 3-hydroxyacyl-CO 99.4 5.6E-12 1.9E-16 123.9 20.7 204 112-360 13-231 (293)
40 3l6d_A Putative oxidoreductase 99.4 2.4E-12 8.3E-17 125.7 18.0 198 112-341 10-214 (306)
41 2zyd_A 6-phosphogluconate dehy 99.4 1E-12 3.5E-17 136.9 15.6 192 112-339 16-232 (480)
42 3qha_A Putative oxidoreductase 99.4 1.6E-12 5.3E-17 126.4 15.6 193 112-334 16-212 (296)
43 2p4q_A 6-phosphogluconate dehy 99.4 9.9E-13 3.4E-17 137.7 14.6 190 112-339 11-227 (497)
44 1vpd_A Tartronate semialdehyde 99.4 1.4E-12 4.8E-17 125.3 13.8 197 112-342 6-214 (299)
45 3k96_A Glycerol-3-phosphate de 99.4 4.2E-12 1.4E-16 127.5 17.3 153 112-287 30-199 (356)
46 1jay_A Coenzyme F420H2:NADP+ o 99.4 5.5E-13 1.9E-17 122.0 9.8 176 112-321 1-200 (212)
47 1evy_A Glycerol-3-phosphate de 99.4 2E-12 6.9E-17 128.4 14.6 146 112-284 16-188 (366)
48 1txg_A Glycerol-3-phosphate de 99.4 2.5E-12 8.4E-17 125.1 14.5 156 112-287 1-175 (335)
49 2iz1_A 6-phosphogluconate dehy 99.4 8.4E-12 2.9E-16 129.5 19.1 193 112-339 6-223 (474)
50 2cvz_A Dehydrogenase, 3-hydrox 99.4 9.5E-13 3.2E-17 125.5 10.7 193 111-342 1-204 (289)
51 1z82_A Glycerol-3-phosphate de 99.4 1.5E-12 5E-17 128.3 12.3 182 112-336 15-238 (335)
52 4ezb_A Uncharacterized conserv 99.4 3.5E-12 1.2E-16 125.6 14.9 187 112-332 25-224 (317)
53 4dll_A 2-hydroxy-3-oxopropiona 99.4 4E-12 1.4E-16 125.0 15.1 198 112-339 32-235 (320)
54 3cky_A 2-hydroxymethyl glutara 99.4 6.8E-12 2.3E-16 120.7 16.1 199 112-342 5-213 (301)
55 1yj8_A Glycerol-3-phosphate de 99.4 9.9E-12 3.4E-16 124.3 17.5 155 106-287 15-209 (375)
56 1x0v_A GPD-C, GPDH-C, glycerol 99.4 1E-11 3.6E-16 122.2 17.4 149 112-287 9-192 (354)
57 4e21_A 6-phosphogluconate dehy 99.4 8.7E-12 3E-16 125.5 16.7 151 107-286 19-175 (358)
58 1ygy_A PGDH, D-3-phosphoglycer 99.4 4E-13 1.4E-17 141.5 7.2 170 91-287 122-307 (529)
59 1i36_A Conserved hypothetical 99.4 4.4E-12 1.5E-16 120.0 13.4 185 112-341 1-196 (264)
60 1yb4_A Tartronic semialdehyde 99.4 7.3E-12 2.5E-16 119.9 14.4 197 111-342 3-211 (295)
61 2ekl_A D-3-phosphoglycerate de 99.3 2.6E-12 9E-17 126.9 9.7 162 91-277 124-295 (313)
62 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.3 1.8E-11 6.3E-16 127.3 16.2 149 112-287 2-164 (478)
63 2pgd_A 6-phosphogluconate dehy 99.3 6.9E-12 2.3E-16 130.5 12.3 191 112-339 3-220 (482)
64 2yjz_A Metalloreductase steap4 99.0 2.1E-13 7.3E-18 126.4 0.0 151 108-287 17-176 (201)
65 2qyt_A 2-dehydropantoate 2-red 99.3 5E-12 1.7E-16 121.8 9.2 209 112-332 9-249 (317)
66 1ks9_A KPA reductase;, 2-dehyd 99.3 8.3E-12 2.8E-16 118.5 10.3 194 112-332 1-223 (291)
67 4gwg_A 6-phosphogluconate dehy 99.3 3.9E-11 1.3E-15 125.4 15.9 153 111-287 4-164 (484)
68 1wdk_A Fatty oxidation complex 99.3 8.9E-11 3E-15 127.8 18.7 204 111-357 314-548 (715)
69 1wwk_A Phosphoglycerate dehydr 99.3 1.4E-11 4.8E-16 121.4 11.0 161 91-277 122-293 (307)
70 1gdh_A D-glycerate dehydrogena 99.3 3.9E-12 1.3E-16 126.1 6.7 162 91-278 123-299 (320)
71 2g76_A 3-PGDH, D-3-phosphoglyc 99.2 2.3E-11 7.8E-16 121.6 11.0 159 91-276 145-314 (335)
72 3hn2_A 2-dehydropantoate 2-red 99.2 4.5E-11 1.5E-15 116.8 12.8 152 112-287 3-172 (312)
73 2wtb_A MFP2, fatty acid multif 99.2 4.5E-10 1.5E-14 122.5 21.5 211 110-359 311-548 (725)
74 1zcj_A Peroxisomal bifunctiona 99.2 4.5E-10 1.5E-14 116.3 19.9 209 111-357 37-269 (463)
75 2raf_A Putative dinucleotide-b 99.2 1.8E-11 6.1E-16 113.5 8.3 139 106-287 15-170 (209)
76 2vns_A Metalloreductase steap3 99.2 6.6E-11 2.3E-15 109.9 9.8 149 112-287 29-188 (215)
77 4dgs_A Dehydrogenase; structur 99.2 6.8E-11 2.3E-15 118.5 10.4 156 91-276 149-317 (340)
78 3gg9_A D-3-phosphoglycerate de 99.2 5.2E-11 1.8E-15 119.8 9.0 108 92-212 131-251 (352)
79 1mv8_A GMD, GDP-mannose 6-dehy 99.1 8.2E-10 2.8E-14 113.1 16.9 200 112-337 1-244 (436)
80 2pi1_A D-lactate dehydrogenase 99.1 6.1E-11 2.1E-15 118.4 8.2 106 92-212 121-230 (334)
81 4e5n_A Thermostable phosphite 99.1 5E-11 1.7E-15 118.8 7.2 108 92-212 124-236 (330)
82 4g2n_A D-isomer specific 2-hyd 99.1 9.3E-11 3.2E-15 117.7 9.1 108 91-212 150-263 (345)
83 3gvx_A Glycerate dehydrogenase 99.1 6.6E-11 2.2E-15 116.2 7.5 152 92-276 105-267 (290)
84 3jtm_A Formate dehydrogenase, 99.1 8.9E-11 3E-15 118.1 8.4 109 92-212 143-256 (351)
85 3gg2_A Sugar dehydrogenase, UD 99.1 8E-10 2.7E-14 114.2 15.7 203 112-338 3-247 (450)
86 2dbq_A Glyoxylate reductase; D 99.1 8.1E-11 2.8E-15 117.0 7.6 108 91-212 123-240 (334)
87 1qp8_A Formate dehydrogenase; 99.1 8.4E-11 2.9E-15 115.8 7.6 104 92-213 106-211 (303)
88 1mx3_A CTBP1, C-terminal bindi 99.1 8.5E-11 2.9E-15 118.0 7.6 108 92-212 142-259 (347)
89 2cuk_A Glycerate dehydrogenase 99.1 1.5E-10 5.1E-15 114.3 9.0 154 91-276 121-288 (311)
90 2nac_A NAD-dependent formate d 99.1 1.4E-10 4.7E-15 118.4 8.4 161 91-275 169-342 (393)
91 2j6i_A Formate dehydrogenase; 99.1 1.3E-10 4.4E-15 117.2 8.0 110 91-212 142-257 (364)
92 4hy3_A Phosphoglycerate oxidor 99.1 2.2E-10 7.4E-15 115.9 9.3 159 91-276 153-325 (365)
93 3ba1_A HPPR, hydroxyphenylpyru 99.1 1.1E-10 3.6E-15 116.6 6.7 155 91-275 143-309 (333)
94 2d0i_A Dehydrogenase; structur 99.1 1.3E-10 4.4E-15 115.7 6.4 107 91-212 120-235 (333)
95 2w2k_A D-mandelate dehydrogena 99.1 2.6E-10 9.1E-15 114.1 8.6 111 91-213 136-257 (348)
96 2gcg_A Glyoxylate reductase/hy 99.1 2.6E-10 8.8E-15 113.2 8.4 109 91-212 132-246 (330)
97 3i83_A 2-dehydropantoate 2-red 99.1 1.2E-09 4.2E-14 106.9 13.1 153 112-287 3-174 (320)
98 3ghy_A Ketopantoate reductase 99.0 9.3E-10 3.2E-14 108.5 12.3 94 112-214 4-107 (335)
99 3pp8_A Glyoxylate/hydroxypyruv 99.0 6.5E-11 2.2E-15 117.4 3.3 106 92-212 122-229 (315)
100 3evt_A Phosphoglycerate dehydr 99.0 8.9E-11 3.1E-15 116.8 4.1 151 91-267 118-277 (324)
101 2o3j_A UDP-glucose 6-dehydroge 99.0 1.4E-09 4.6E-14 113.2 13.1 207 111-338 9-262 (481)
102 3hwr_A 2-dehydropantoate 2-red 99.0 1.6E-09 5.6E-14 106.2 13.0 101 112-221 20-131 (318)
103 3hg7_A D-isomer specific 2-hyd 99.0 7.8E-11 2.7E-15 117.4 3.0 150 92-268 123-281 (324)
104 4a7p_A UDP-glucose dehydrogena 99.0 9.7E-09 3.3E-13 106.3 18.5 201 112-338 9-251 (446)
105 2q3e_A UDP-glucose 6-dehydroge 99.0 6.5E-09 2.2E-13 107.5 17.0 205 111-337 5-255 (467)
106 1bg6_A N-(1-D-carboxylethyl)-L 99.0 2.2E-09 7.5E-14 105.1 11.6 96 112-214 5-111 (359)
107 1j4a_A D-LDH, D-lactate dehydr 99.0 8E-10 2.7E-14 110.0 8.5 107 91-212 126-235 (333)
108 1sc6_A PGDH, D-3-phosphoglycer 99.0 5.2E-10 1.8E-14 114.4 7.2 160 91-275 125-296 (404)
109 2yq5_A D-isomer specific 2-hyd 99.0 5.3E-10 1.8E-14 112.1 7.2 104 93-212 128-236 (343)
110 3pid_A UDP-glucose 6-dehydroge 99.0 9.9E-09 3.4E-13 105.9 16.1 195 112-338 37-268 (432)
111 3k5p_A D-3-phosphoglycerate de 98.9 1.1E-09 3.7E-14 112.6 8.1 160 92-276 137-308 (416)
112 1xdw_A NAD+-dependent (R)-2-hy 98.9 1E-09 3.5E-14 109.1 6.8 106 91-212 125-234 (331)
113 1dxy_A D-2-hydroxyisocaproate 98.9 1E-09 3.5E-14 109.3 6.5 106 91-212 124-233 (333)
114 3ado_A Lambda-crystallin; L-gu 98.9 5.5E-08 1.9E-12 96.7 18.1 151 112-287 7-182 (319)
115 1dlj_A UDP-glucose dehydrogena 98.8 6.5E-08 2.2E-12 98.2 17.1 91 112-211 1-116 (402)
116 3c7a_A Octopine dehydrogenase; 98.8 6.7E-09 2.3E-13 104.5 8.6 94 111-211 2-115 (404)
117 3ego_A Probable 2-dehydropanto 98.8 1.8E-08 6.2E-13 98.4 10.4 111 112-235 3-120 (307)
118 3g79_A NDP-N-acetyl-D-galactos 98.8 1E-07 3.5E-12 99.5 16.6 202 111-336 18-268 (478)
119 2y0c_A BCEC, UDP-glucose dehyd 98.8 2E-08 6.7E-13 104.6 11.0 94 110-214 7-130 (478)
120 1y81_A Conserved hypothetical 98.7 1.9E-08 6.4E-13 88.2 8.0 114 107-243 11-128 (138)
121 2o4c_A Erythronate-4-phosphate 98.7 5.1E-09 1.8E-13 106.4 4.8 138 106-274 112-263 (380)
122 3ojo_A CAP5O; rossmann fold, c 98.7 2.4E-07 8.2E-12 95.6 16.4 202 109-336 10-248 (431)
123 2hk9_A Shikimate dehydrogenase 98.7 8E-09 2.7E-13 99.5 4.6 96 107-213 126-222 (275)
124 3oet_A Erythronate-4-phosphate 98.7 8.1E-09 2.8E-13 105.0 4.7 151 106-287 115-284 (381)
125 3kb6_A D-lactate dehydrogenase 98.7 3.8E-08 1.3E-12 98.1 8.6 105 93-212 122-230 (334)
126 3d4o_A Dipicolinate synthase s 98.6 6.4E-08 2.2E-12 93.9 9.4 94 106-212 151-244 (293)
127 4fgw_A Glycerol-3-phosphate de 98.6 4.6E-07 1.6E-11 92.4 15.6 97 112-214 35-154 (391)
128 2rir_A Dipicolinate synthase, 98.6 8.5E-08 2.9E-12 93.2 9.6 94 106-212 153-246 (300)
129 1lss_A TRK system potassium up 98.6 3.3E-07 1.1E-11 76.9 11.8 96 112-214 5-105 (140)
130 2duw_A Putative COA-binding pr 98.6 5.1E-08 1.7E-12 85.9 6.8 111 112-243 14-129 (145)
131 1v8b_A Adenosylhomocysteinase; 98.6 2.6E-08 8.8E-13 104.0 5.6 94 106-215 253-347 (479)
132 3d64_A Adenosylhomocysteinase; 98.6 2.7E-08 9.3E-13 104.2 4.9 93 106-214 273-366 (494)
133 3g17_A Similar to 2-dehydropan 98.6 3.7E-09 1.3E-13 102.3 -1.6 98 112-217 3-102 (294)
134 3oj0_A Glutr, glutamyl-tRNA re 98.6 2.7E-08 9.1E-13 86.1 3.7 90 110-212 21-110 (144)
135 2i99_A MU-crystallin homolog; 98.5 8E-08 2.8E-12 94.3 7.1 90 112-214 136-228 (312)
136 3zwc_A Peroxisomal bifunctiona 98.5 3.2E-06 1.1E-10 92.5 19.5 212 109-358 314-549 (742)
137 3h9u_A Adenosylhomocysteinase; 98.5 1.4E-07 5E-12 97.3 8.1 92 106-213 207-299 (436)
138 2d5c_A AROE, shikimate 5-dehyd 98.5 7.8E-08 2.7E-12 91.6 5.1 90 107-212 114-206 (263)
139 2b0j_A 5,10-methenyltetrahydro 98.5 3.4E-06 1.2E-10 82.6 16.2 172 160-363 127-310 (358)
140 1hyh_A L-hicdh, L-2-hydroxyiso 98.4 5.7E-07 1.9E-11 87.7 9.9 94 111-215 1-126 (309)
141 3n58_A Adenosylhomocysteinase; 98.4 7E-07 2.4E-11 92.6 10.2 123 74-215 214-337 (464)
142 3gvp_A Adenosylhomocysteinase 98.4 4.1E-07 1.4E-11 93.9 6.8 93 106-214 216-309 (435)
143 2dc1_A L-aspartate dehydrogena 98.4 7.1E-07 2.4E-11 83.6 7.9 78 112-211 1-80 (236)
144 3ce6_A Adenosylhomocysteinase; 98.3 1E-06 3.6E-11 92.3 9.4 92 107-214 271-363 (494)
145 3euw_A MYO-inositol dehydrogen 98.3 1.9E-06 6.7E-11 84.5 9.5 80 112-200 5-87 (344)
146 1x7d_A Ornithine cyclodeaminas 98.3 6.5E-07 2.2E-11 89.7 5.8 95 112-215 130-229 (350)
147 3uuw_A Putative oxidoreductase 98.3 1.5E-06 5.1E-11 84.0 8.1 86 112-209 7-94 (308)
148 2fp4_A Succinyl-COA ligase [GD 98.3 1.3E-06 4.4E-11 86.1 7.7 122 108-245 11-137 (305)
149 4hkt_A Inositol 2-dehydrogenas 98.3 2.2E-06 7.6E-11 83.7 9.2 85 112-209 4-91 (331)
150 2nu8_A Succinyl-COA ligase [AD 98.2 1.5E-06 5E-11 84.9 7.6 117 112-243 8-127 (288)
151 3q2i_A Dehydrogenase; rossmann 98.2 2.4E-06 8.1E-11 84.3 9.2 87 112-209 14-103 (354)
152 2d59_A Hypothetical protein PH 98.2 4.9E-06 1.7E-10 73.0 10.1 115 112-248 23-141 (144)
153 3e9m_A Oxidoreductase, GFO/IDH 98.2 3E-06 1E-10 83.0 9.4 80 112-199 6-88 (330)
154 1oi7_A Succinyl-COA synthetase 98.2 1.6E-06 5.6E-11 84.6 7.2 117 112-243 8-127 (288)
155 3p2y_A Alanine dehydrogenase/p 98.2 1.8E-06 6.2E-11 87.7 7.7 97 108-212 182-302 (381)
156 3mz0_A Inositol 2-dehydrogenas 98.2 3.2E-06 1.1E-10 83.1 9.0 86 112-209 3-94 (344)
157 2g1u_A Hypothetical protein TM 98.2 5.9E-06 2E-10 72.0 9.4 101 105-213 14-120 (155)
158 3llv_A Exopolyphosphatase-rela 98.2 1.2E-05 4E-10 68.5 11.1 94 112-212 7-104 (141)
159 3ezy_A Dehydrogenase; structur 98.2 2.4E-06 8.2E-11 84.0 7.6 86 112-208 3-91 (344)
160 2ho3_A Oxidoreductase, GFO/IDH 98.2 3.8E-06 1.3E-10 81.7 8.8 87 111-208 1-89 (325)
161 3fr7_A Putative ketol-acid red 98.2 2.6E-06 8.9E-11 89.2 7.9 88 310-403 394-485 (525)
162 3hdj_A Probable ornithine cycl 98.2 2E-06 6.9E-11 84.9 6.4 91 112-216 122-217 (313)
163 1iuk_A Hypothetical protein TT 98.1 6.2E-06 2.1E-10 72.1 8.5 117 112-248 14-134 (140)
164 1a5z_A L-lactate dehydrogenase 98.1 5.4E-06 1.8E-10 81.5 8.9 93 112-215 1-120 (319)
165 2glx_A 1,5-anhydro-D-fructose 98.1 6.1E-06 2.1E-10 80.2 9.1 86 112-209 1-90 (332)
166 3fwz_A Inner membrane protein 98.1 1.6E-05 5.4E-10 68.4 10.6 75 112-193 8-86 (140)
167 3db2_A Putative NADPH-dependen 98.1 4.5E-06 1.6E-10 82.3 7.9 86 112-209 6-94 (354)
168 2vhw_A Alanine dehydrogenase; 98.1 3.6E-06 1.2E-10 84.8 7.0 99 106-212 164-268 (377)
169 4dio_A NAD(P) transhydrogenase 98.1 4.5E-06 1.5E-10 85.5 7.4 97 108-212 188-312 (405)
170 3e18_A Oxidoreductase; dehydro 98.1 1E-05 3.5E-10 80.3 9.8 86 112-209 6-93 (359)
171 3cea_A MYO-inositol 2-dehydrog 98.1 1.2E-05 4.2E-10 78.5 10.1 86 112-209 9-99 (346)
172 3c85_A Putative glutathione-re 98.1 2.3E-05 7.9E-10 69.7 10.8 93 106-205 35-132 (183)
173 3ec7_A Putative dehydrogenase; 98.1 1.1E-05 3.7E-10 80.1 9.4 86 112-209 24-115 (357)
174 1tlt_A Putative oxidoreductase 98.1 1.2E-05 4.1E-10 78.0 9.5 85 112-208 6-92 (319)
175 3ic5_A Putative saccharopine d 98.0 1.4E-05 4.9E-10 64.8 8.5 91 112-212 6-100 (118)
176 2hmt_A YUAA protein; RCK, KTN, 98.0 1.7E-05 5.7E-10 66.5 9.0 98 108-213 4-106 (144)
177 3vtf_A UDP-glucose 6-dehydroge 98.0 0.00016 5.4E-09 74.9 17.9 198 111-336 21-261 (444)
178 1xea_A Oxidoreductase, GFO/IDH 98.0 9.4E-06 3.2E-10 79.0 8.3 84 112-206 3-88 (323)
179 3evn_A Oxidoreductase, GFO/IDH 98.0 8.5E-06 2.9E-10 79.6 7.8 87 112-209 6-95 (329)
180 3rc1_A Sugar 3-ketoreductase; 98.0 1.2E-05 4E-10 79.6 8.5 85 112-208 28-116 (350)
181 1lld_A L-lactate dehydrogenase 98.0 1.2E-05 4E-10 78.0 8.3 98 112-216 8-129 (319)
182 3l4b_C TRKA K+ channel protien 98.0 2.8E-05 9.5E-10 71.4 10.1 94 112-211 1-99 (218)
183 2ewd_A Lactate dehydrogenase,; 98.0 2.5E-05 8.7E-10 76.4 10.2 93 112-214 5-124 (317)
184 1omo_A Alanine dehydrogenase; 98.0 6.6E-06 2.2E-10 81.2 5.9 92 112-215 126-220 (322)
185 1ydw_A AX110P-like protein; st 97.9 3E-05 1E-09 76.7 10.3 90 112-209 7-99 (362)
186 1x13_A NAD(P) transhydrogenase 97.9 1.1E-05 3.9E-10 82.0 7.2 98 107-212 169-292 (401)
187 3c1a_A Putative oxidoreductase 97.9 8.1E-06 2.8E-10 79.2 5.7 84 112-208 11-96 (315)
188 3ohs_X Trans-1,2-dihydrobenzen 97.9 1.5E-05 5.2E-10 77.9 7.7 89 112-209 3-94 (334)
189 3qy9_A DHPR, dihydrodipicolina 97.9 3.5E-05 1.2E-09 73.7 9.4 151 111-286 3-162 (243)
190 3u62_A Shikimate dehydrogenase 97.9 1.4E-06 4.9E-11 83.5 -0.2 90 108-211 107-199 (253)
191 2egg_A AROE, shikimate 5-dehyd 97.9 6.9E-06 2.4E-10 80.2 4.7 95 107-211 138-239 (297)
192 4had_A Probable oxidoreductase 97.9 2.4E-05 8.3E-10 76.6 8.5 91 107-208 19-113 (350)
193 1gpj_A Glutamyl-tRNA reductase 97.9 3E-05 1E-09 78.6 8.9 75 107-190 164-239 (404)
194 2v6b_A L-LDH, L-lactate dehydr 97.9 3.6E-05 1.2E-09 75.2 8.9 93 112-215 1-120 (304)
195 1l7d_A Nicotinamide nucleotide 97.9 2.7E-05 9.1E-10 78.5 8.1 98 107-212 169-294 (384)
196 3don_A Shikimate dehydrogenase 97.8 3E-06 1E-10 82.5 0.5 94 107-211 114-209 (277)
197 3bio_A Oxidoreductase, GFO/IDH 97.8 5.2E-05 1.8E-09 74.0 9.2 86 112-211 10-95 (304)
198 4fb5_A Probable oxidoreductase 97.8 3.7E-05 1.3E-09 75.5 7.8 98 106-209 18-122 (393)
199 2p2s_A Putative oxidoreductase 97.8 0.0001 3.6E-09 71.9 10.7 84 112-208 5-93 (336)
200 1f06_A MESO-diaminopimelate D- 97.8 2E-05 6.7E-10 77.5 5.5 85 112-211 4-88 (320)
201 2z2v_A Hypothetical protein PH 97.8 1.5E-05 5.1E-10 80.1 4.4 92 112-213 17-109 (365)
202 3dty_A Oxidoreductase, GFO/IDH 97.7 5.3E-05 1.8E-09 76.1 8.3 88 112-209 13-113 (398)
203 1guz_A Malate dehydrogenase; o 97.7 0.00014 4.8E-09 71.1 11.1 70 112-188 1-79 (310)
204 3moi_A Probable dehydrogenase; 97.7 4E-05 1.4E-09 76.7 7.3 86 112-209 3-92 (387)
205 2eez_A Alanine dehydrogenase; 97.7 5E-05 1.7E-09 76.0 7.8 99 106-212 162-266 (369)
206 2hjr_A Malate dehydrogenase; m 97.7 0.00016 5.6E-09 71.4 11.2 88 112-211 15-130 (328)
207 3ond_A Adenosylhomocysteinase; 97.7 6.9E-05 2.4E-09 78.4 8.8 92 107-214 262-354 (488)
208 1pzg_A LDH, lactate dehydrogen 97.7 0.00019 6.4E-09 71.1 10.9 93 112-211 10-131 (331)
209 1id1_A Putative potassium chan 97.7 0.00029 9.8E-09 61.0 10.8 96 112-213 4-107 (153)
210 1h6d_A Precursor form of gluco 97.7 6.8E-05 2.3E-09 76.6 7.7 89 112-208 84-177 (433)
211 3o8q_A Shikimate 5-dehydrogena 97.7 1.5E-05 5.2E-10 77.6 2.7 75 107-192 123-201 (281)
212 3o9z_A Lipopolysaccaride biosy 97.7 9.4E-05 3.2E-09 72.2 8.3 86 111-209 3-100 (312)
213 4h3v_A Oxidoreductase domain p 97.7 7.5E-05 2.6E-09 73.2 7.5 90 113-209 8-103 (390)
214 3oa2_A WBPB; oxidoreductase, s 97.6 0.00011 3.7E-09 72.0 8.2 86 111-209 3-101 (318)
215 3v5n_A Oxidoreductase; structu 97.6 8.8E-05 3E-09 75.2 7.7 88 112-209 38-138 (417)
216 1ldn_A L-lactate dehydrogenase 97.6 0.00015 5E-09 71.3 9.0 70 112-189 7-85 (316)
217 1leh_A Leucine dehydrogenase; 97.6 9.1E-05 3.1E-09 74.7 7.4 69 107-187 170-239 (364)
218 4gqa_A NAD binding oxidoreduct 97.6 0.00012 4E-09 73.6 7.9 92 112-209 27-124 (412)
219 2czc_A Glyceraldehyde-3-phosph 97.6 0.00019 6.4E-09 71.1 9.2 94 112-213 3-111 (334)
220 2yv1_A Succinyl-COA ligase [AD 97.6 7.7E-05 2.6E-09 72.9 6.2 91 112-216 14-107 (294)
221 3i23_A Oxidoreductase, GFO/IDH 97.6 0.00015 5.1E-09 71.4 8.3 85 112-209 3-93 (349)
222 3m2t_A Probable dehydrogenase; 97.5 0.00012 4.1E-09 72.6 7.4 87 112-209 6-96 (359)
223 1p77_A Shikimate 5-dehydrogena 97.5 3.1E-05 1.1E-09 74.3 3.0 77 107-193 116-195 (272)
224 2aef_A Calcium-gated potassium 97.5 0.00024 8.2E-09 65.7 9.0 93 112-213 10-107 (234)
225 3pwz_A Shikimate dehydrogenase 97.5 6.2E-05 2.1E-09 72.9 5.0 92 107-211 117-214 (272)
226 1zh8_A Oxidoreductase; TM0312, 97.5 0.00018 6.2E-09 70.7 8.3 86 112-208 19-109 (340)
227 1t2d_A LDH-P, L-lactate dehydr 97.5 0.00036 1.2E-08 68.8 10.4 91 111-211 4-125 (322)
228 1nyt_A Shikimate 5-dehydrogena 97.5 8.8E-05 3E-09 71.0 5.8 94 107-211 116-213 (271)
229 2yv2_A Succinyl-COA synthetase 97.5 0.00013 4.5E-09 71.4 7.0 91 112-216 14-108 (297)
230 3e82_A Putative oxidoreductase 97.5 0.00029 9.8E-09 70.0 9.6 84 112-209 8-95 (364)
231 2ixa_A Alpha-N-acetylgalactosa 97.5 0.00034 1.2E-08 71.4 10.2 85 112-208 21-118 (444)
232 3u3x_A Oxidoreductase; structu 97.5 0.0003 1E-08 69.8 9.4 86 112-209 27-116 (361)
233 3f4l_A Putative oxidoreductase 97.5 7.6E-05 2.6E-09 73.3 4.7 86 112-210 3-94 (345)
234 2i6t_A Ubiquitin-conjugating e 97.4 0.00081 2.8E-08 65.9 11.3 89 111-211 14-124 (303)
235 3gdo_A Uncharacterized oxidore 97.4 0.0003 1E-08 69.6 8.2 84 112-209 6-93 (358)
236 3kux_A Putative oxidoreductase 97.4 0.00028 9.7E-09 69.4 7.9 85 112-209 8-95 (352)
237 1ur5_A Malate dehydrogenase; o 97.4 0.001 3.5E-08 65.1 11.5 67 112-187 3-79 (309)
238 3phh_A Shikimate dehydrogenase 97.4 0.0002 6.9E-09 69.4 6.3 88 110-211 118-208 (269)
239 2nvw_A Galactose/lactose metab 97.4 0.00031 1.1E-08 72.9 8.0 83 112-199 40-129 (479)
240 3fhl_A Putative oxidoreductase 97.4 0.00025 8.6E-09 70.2 7.0 84 112-209 6-93 (362)
241 3btv_A Galactose/lactose metab 97.3 0.00028 9.7E-09 72.0 7.3 83 112-199 21-110 (438)
242 2vt3_A REX, redox-sensing tran 97.3 0.00012 4.2E-09 68.7 3.8 81 112-201 86-168 (215)
243 3oqb_A Oxidoreductase; structu 97.3 0.00036 1.2E-08 69.2 7.5 86 112-209 7-111 (383)
244 3ip3_A Oxidoreductase, putativ 97.3 0.00037 1.2E-08 68.2 7.3 86 112-209 3-95 (337)
245 1nvm_B Acetaldehyde dehydrogen 97.3 0.00082 2.8E-08 66.2 9.8 94 112-213 5-105 (312)
246 1oju_A MDH, malate dehydrogena 97.3 0.0011 3.8E-08 64.8 10.6 67 112-187 1-78 (294)
247 3l9w_A Glutathione-regulated p 97.3 0.001 3.5E-08 67.8 10.6 94 112-212 5-103 (413)
248 4gmf_A Yersiniabactin biosynth 97.2 0.00023 8E-09 71.7 5.4 94 112-214 8-103 (372)
249 1lc0_A Biliverdin reductase A; 97.2 0.00023 7.7E-09 68.9 5.0 83 112-208 8-92 (294)
250 3gvi_A Malate dehydrogenase; N 97.2 0.0013 4.4E-08 65.2 10.5 72 106-187 3-84 (324)
251 1y6j_A L-lactate dehydrogenase 97.2 0.00092 3.2E-08 65.7 9.2 89 112-211 8-122 (318)
252 3keo_A Redox-sensing transcrip 97.2 0.00029 9.9E-09 66.2 5.0 110 112-237 85-197 (212)
253 3abi_A Putative uncharacterize 97.2 0.00065 2.2E-08 67.4 7.5 84 106-198 10-97 (365)
254 3p7m_A Malate dehydrogenase; p 97.2 0.0019 6.3E-08 63.9 10.7 67 112-187 6-82 (321)
255 1edz_A 5,10-methylenetetrahydr 97.1 0.00019 6.3E-09 71.4 3.3 96 107-213 174-276 (320)
256 1pjc_A Protein (L-alanine dehy 97.1 0.00042 1.4E-08 69.1 5.8 98 107-212 164-267 (361)
257 3jyo_A Quinate/shikimate dehyd 97.1 0.0006 2.1E-08 66.2 6.6 98 107-211 124-228 (283)
258 4ew6_A D-galactose-1-dehydroge 97.1 0.00091 3.1E-08 65.6 8.0 80 112-209 26-109 (330)
259 3nep_X Malate dehydrogenase; h 97.1 0.0015 5.1E-08 64.5 9.3 68 112-188 1-79 (314)
260 3pqe_A L-LDH, L-lactate dehydr 97.1 0.0016 5.4E-08 64.6 9.4 70 112-187 6-82 (326)
261 3d0o_A L-LDH 1, L-lactate dehy 97.1 0.0024 8.3E-08 62.6 10.5 71 112-188 7-84 (317)
262 3ngx_A Bifunctional protein fo 97.1 0.00091 3.1E-08 65.2 7.2 74 108-212 148-222 (276)
263 1c1d_A L-phenylalanine dehydro 97.1 0.0011 3.7E-08 66.8 8.0 66 107-185 172-238 (355)
264 2d4a_B Malate dehydrogenase; a 97.1 0.002 6.9E-08 63.1 9.7 89 113-211 1-115 (308)
265 3ldh_A Lactate dehydrogenase; 97.0 0.0018 6.3E-08 64.5 9.3 69 112-187 22-98 (330)
266 3fbt_A Chorismate mutase and s 97.0 0.0004 1.4E-08 67.7 4.4 71 107-190 119-190 (282)
267 4f3y_A DHPR, dihydrodipicolina 97.0 0.0008 2.7E-08 65.2 6.4 161 111-286 7-185 (272)
268 1cf2_P Protein (glyceraldehyde 97.0 0.0012 4.2E-08 65.6 7.7 96 111-214 1-111 (337)
269 3fef_A Putative glucosidase LP 97.0 0.0011 3.8E-08 68.6 7.6 73 112-192 6-89 (450)
270 1ez4_A Lactate dehydrogenase; 97.0 0.0024 8.3E-08 62.8 9.3 68 112-189 6-83 (318)
271 2zqz_A L-LDH, L-lactate dehydr 97.0 0.0025 8.7E-08 63.0 9.4 68 112-189 10-87 (326)
272 1b7g_O Protein (glyceraldehyde 96.9 0.0041 1.4E-07 61.9 11.0 95 111-213 1-109 (340)
273 1npy_A Hypothetical shikimate 96.9 0.0012 4.1E-08 63.7 6.4 70 109-191 118-188 (271)
274 4a26_A Putative C-1-tetrahydro 96.9 0.0011 3.8E-08 65.3 6.3 76 106-212 161-239 (300)
275 3l07_A Bifunctional protein fo 96.9 0.0017 5.9E-08 63.5 7.5 76 106-212 157-233 (285)
276 3p2o_A Bifunctional protein fo 96.9 0.0018 6.2E-08 63.4 7.4 76 106-212 156-232 (285)
277 3do5_A HOM, homoserine dehydro 96.8 0.0023 7.8E-08 63.5 8.1 98 110-211 1-114 (327)
278 3vku_A L-LDH, L-lactate dehydr 96.8 0.0039 1.3E-07 61.8 9.3 66 112-187 10-85 (326)
279 2axq_A Saccharopine dehydrogen 96.8 0.0027 9.1E-08 65.9 8.3 97 106-211 19-118 (467)
280 2xxj_A L-LDH, L-lactate dehydr 96.8 0.0024 8.2E-08 62.6 7.5 67 112-188 1-77 (310)
281 3tl2_A Malate dehydrogenase; c 96.8 0.0026 8.7E-08 62.8 7.7 66 112-186 9-86 (315)
282 1ff9_A Saccharopine reductase; 96.8 0.0026 8.9E-08 65.5 8.0 78 112-195 4-85 (450)
283 4ina_A Saccharopine dehydrogen 96.8 0.0023 7.9E-08 64.7 7.5 81 111-197 1-95 (405)
284 4a5o_A Bifunctional protein fo 96.7 0.0025 8.6E-08 62.4 7.4 76 106-212 157-233 (286)
285 2yyy_A Glyceraldehyde-3-phosph 96.7 0.0074 2.5E-07 60.2 11.0 92 112-214 3-115 (343)
286 1mld_A Malate dehydrogenase; o 96.7 0.0064 2.2E-07 59.6 10.1 68 112-187 1-77 (314)
287 3tnl_A Shikimate dehydrogenase 96.7 0.003 1E-07 62.4 7.7 97 107-211 151-262 (315)
288 3t4e_A Quinate/shikimate dehyd 96.7 0.0026 8.7E-08 62.8 7.0 77 107-190 145-232 (312)
289 1b0a_A Protein (fold bifunctio 96.6 0.0031 1.1E-07 61.8 6.9 76 106-212 155-231 (288)
290 2dt5_A AT-rich DNA-binding pro 96.6 0.00074 2.5E-08 63.1 2.1 81 112-200 81-162 (211)
291 3upl_A Oxidoreductase; rossman 96.6 0.0057 1.9E-07 63.3 8.9 86 112-209 24-136 (446)
292 1a4i_A Methylenetetrahydrofola 96.5 0.0048 1.6E-07 60.8 7.8 76 106-212 161-237 (301)
293 4aj2_A L-lactate dehydrogenase 96.5 0.0062 2.1E-07 60.5 8.7 72 108-187 17-96 (331)
294 1dih_A Dihydrodipicolinate red 96.5 0.0043 1.5E-07 59.9 7.1 160 112-286 6-184 (273)
295 1jw9_B Molybdopterin biosynthe 96.5 0.0072 2.4E-07 57.2 8.5 87 105-198 26-141 (249)
296 3ijp_A DHPR, dihydrodipicolina 96.5 0.0033 1.1E-07 61.5 6.2 160 112-286 22-200 (288)
297 1nvt_A Shikimate 5'-dehydrogen 96.5 0.0017 5.9E-08 62.4 4.1 74 107-191 125-206 (287)
298 2x0j_A Malate dehydrogenase; o 96.3 0.017 5.8E-07 56.5 10.3 69 112-186 1-77 (294)
299 3fi9_A Malate dehydrogenase; s 96.3 0.0077 2.6E-07 60.1 7.9 74 106-186 4-84 (343)
300 3tum_A Shikimate dehydrogenase 96.2 0.0031 1.1E-07 61.0 4.5 98 107-211 122-224 (269)
301 1j5p_A Aspartate dehydrogenase 96.2 0.0055 1.9E-07 59.0 5.8 80 112-213 13-93 (253)
302 1ys4_A Aspartate-semialdehyde 96.2 0.014 4.7E-07 58.1 8.9 93 112-214 9-116 (354)
303 3ius_A Uncharacterized conserv 96.2 0.03 1E-06 52.1 10.7 70 111-189 5-74 (286)
304 3ff4_A Uncharacterized protein 96.2 0.0096 3.3E-07 51.0 6.6 108 112-243 5-116 (122)
305 4g65_A TRK system potassium up 96.1 0.0089 3E-07 61.7 7.6 74 112-192 4-82 (461)
306 1vl6_A Malate oxidoreductase; 96.1 0.016 5.4E-07 59.0 8.9 90 107-209 189-291 (388)
307 2ozp_A N-acetyl-gamma-glutamyl 96.1 0.011 3.7E-07 58.9 7.6 150 111-286 4-166 (345)
308 2c2x_A Methylenetetrahydrofola 96.1 0.0097 3.3E-07 58.1 7.0 78 106-212 154-232 (281)
309 1obb_A Maltase, alpha-glucosid 96.1 0.02 6.8E-07 59.7 9.8 73 112-188 4-87 (480)
310 3ing_A Homoserine dehydrogenas 96.0 0.014 4.8E-07 57.8 8.2 98 112-211 5-116 (325)
311 3e8x_A Putative NAD-dependent 96.0 0.024 8E-07 51.6 8.8 75 105-188 16-94 (236)
312 3dfz_A SIRC, precorrin-2 dehyd 95.9 0.021 7.3E-07 53.7 8.4 89 100-198 22-111 (223)
313 1lnq_A MTHK channels, potassiu 95.9 0.019 6.6E-07 55.8 8.3 91 112-211 116-211 (336)
314 1xyg_A Putative N-acetyl-gamma 95.8 0.017 5.8E-07 57.8 7.5 148 112-286 17-180 (359)
315 3mtj_A Homoserine dehydrogenas 95.7 0.027 9.4E-07 58.1 9.1 91 113-211 12-109 (444)
316 3eag_A UDP-N-acetylmuramate:L- 95.7 0.029 9.8E-07 54.8 8.8 67 111-185 4-73 (326)
317 3dr3_A N-acetyl-gamma-glutamyl 95.7 0.029 9.9E-07 55.9 8.6 93 111-213 4-107 (337)
318 2dvm_A Malic enzyme, 439AA lon 95.6 0.022 7.4E-07 58.9 7.7 93 106-211 182-295 (439)
319 1smk_A Malate dehydrogenase, g 95.6 0.052 1.8E-06 53.3 10.1 68 112-187 9-85 (326)
320 1u8f_O GAPDH, glyceraldehyde-3 95.5 0.047 1.6E-06 54.1 9.5 93 112-213 4-124 (335)
321 1u8x_X Maltose-6'-phosphate gl 95.4 0.098 3.3E-06 54.3 12.0 77 112-190 29-114 (472)
322 3ew7_A LMO0794 protein; Q8Y8U8 95.4 0.059 2E-06 47.8 9.0 69 112-188 1-71 (221)
323 2ep5_A 350AA long hypothetical 95.4 0.035 1.2E-06 55.2 8.0 93 112-213 5-109 (350)
324 1s6y_A 6-phospho-beta-glucosid 95.3 0.051 1.8E-06 56.1 9.5 75 112-190 8-95 (450)
325 1ebf_A Homoserine dehydrogenas 95.3 0.012 4.3E-07 58.9 4.7 22 112-133 5-26 (358)
326 2csu_A 457AA long hypothetical 95.3 0.029 9.9E-07 57.9 7.5 90 108-215 6-100 (457)
327 1duv_G Octase-1, ornithine tra 95.3 0.099 3.4E-06 52.1 10.9 72 107-187 152-233 (333)
328 1p3d_A UDP-N-acetylmuramate--a 95.2 0.045 1.5E-06 56.1 8.7 69 108-185 15-84 (475)
329 1p9l_A Dihydrodipicolinate red 95.2 0.062 2.1E-06 51.1 8.8 144 112-285 1-156 (245)
330 3lk7_A UDP-N-acetylmuramoylala 95.2 0.035 1.2E-06 56.7 7.6 69 107-185 6-79 (451)
331 1dxh_A Ornithine carbamoyltran 95.2 0.1 3.6E-06 52.0 10.8 72 107-187 152-233 (335)
332 3qvo_A NMRA family protein; st 95.2 0.02 6.7E-07 52.4 5.2 85 111-202 23-112 (236)
333 1zud_1 Adenylyltransferase THI 95.1 0.052 1.8E-06 51.4 8.1 87 105-198 23-138 (251)
334 3r6d_A NAD-dependent epimerase 95.1 0.069 2.4E-06 47.9 8.5 72 112-189 6-84 (221)
335 1pvv_A Otcase, ornithine carba 95.1 0.13 4.6E-06 50.7 11.1 71 107-186 152-231 (315)
336 4hv4_A UDP-N-acetylmuramate--L 95.0 0.053 1.8E-06 56.2 8.3 66 111-185 22-88 (494)
337 1o6z_A MDH, malate dehydrogena 94.9 0.065 2.2E-06 52.0 8.3 66 112-187 1-79 (303)
338 1b8p_A Protein (malate dehydro 94.8 0.068 2.3E-06 52.4 8.3 69 112-187 6-92 (329)
339 1qyc_A Phenylcoumaran benzylic 94.8 0.08 2.7E-06 49.6 8.4 82 111-198 4-100 (308)
340 1lu9_A Methylene tetrahydromet 94.8 0.034 1.2E-06 53.1 5.8 75 107-188 116-198 (287)
341 2ejw_A HDH, homoserine dehydro 94.8 0.029 1E-06 55.7 5.5 89 112-210 4-96 (332)
342 2nqt_A N-acetyl-gamma-glutamyl 94.7 0.033 1.1E-06 55.7 5.8 89 111-213 9-111 (352)
343 2w37_A Ornithine carbamoyltran 94.6 0.16 5.5E-06 51.1 10.4 70 107-187 173-254 (359)
344 1p0f_A NADP-dependent alcohol 94.6 0.22 7.6E-06 48.9 11.3 92 109-211 191-292 (373)
345 2d8a_A PH0655, probable L-thre 94.5 0.083 2.9E-06 51.4 7.9 93 109-212 167-267 (348)
346 2r6j_A Eugenol synthase 1; phe 94.4 0.12 4.1E-06 48.9 8.7 81 112-198 12-102 (318)
347 3c8m_A Homoserine dehydrogenas 94.4 0.057 1.9E-06 53.3 6.6 93 112-210 7-119 (331)
348 3ip1_A Alcohol dehydrogenase, 94.4 0.27 9.2E-06 49.0 11.6 97 108-212 212-318 (404)
349 4h7p_A Malate dehydrogenase; s 94.4 0.2 6.9E-06 49.9 10.6 81 104-186 18-108 (345)
350 3e5r_O PP38, glyceraldehyde-3- 94.4 0.11 3.8E-06 51.6 8.6 93 112-212 4-126 (337)
351 3two_A Mannitol dehydrogenase; 94.3 0.071 2.4E-06 51.9 7.0 90 108-211 175-264 (348)
352 2i6u_A Otcase, ornithine carba 94.3 0.1 3.5E-06 51.4 8.2 69 107-186 145-225 (307)
353 4b4u_A Bifunctional protein fo 94.3 0.089 3.1E-06 51.8 7.6 76 106-212 175-251 (303)
354 1vlv_A Otcase, ornithine carba 94.3 0.1 3.5E-06 51.8 8.1 72 107-187 164-245 (325)
355 1e3i_A Alcohol dehydrogenase, 94.3 0.27 9.4E-06 48.2 11.2 92 109-211 195-296 (376)
356 1hdo_A Biliverdin IX beta redu 94.2 0.17 5.7E-06 44.1 8.6 70 112-188 4-77 (206)
357 3tpf_A Otcase, ornithine carba 94.2 0.17 5.7E-06 49.9 9.4 71 107-186 142-222 (307)
358 3h2s_A Putative NADH-flavin re 94.2 0.25 8.5E-06 43.9 9.8 70 112-188 1-72 (224)
359 1cdo_A Alcohol dehydrogenase; 94.2 0.29 9.8E-06 48.0 11.1 92 109-211 192-293 (374)
360 2gas_A Isoflavone reductase; N 94.2 0.15 5.1E-06 47.7 8.7 82 111-198 2-99 (307)
361 3gd5_A Otcase, ornithine carba 94.1 0.12 4.2E-06 51.2 8.3 69 107-186 154-233 (323)
362 2cdc_A Glucose dehydrogenase g 94.1 0.075 2.6E-06 52.2 6.8 93 107-211 178-277 (366)
363 4a2c_A Galactitol-1-phosphate 94.1 0.26 8.9E-06 47.5 10.5 95 108-212 159-260 (346)
364 2jhf_A Alcohol dehydrogenase E 94.1 0.27 9.3E-06 48.2 10.8 92 109-211 191-292 (374)
365 1vkn_A N-acetyl-gamma-glutamyl 94.1 0.073 2.5E-06 53.4 6.7 90 111-213 13-108 (351)
366 3c1o_A Eugenol synthase; pheny 94.1 0.16 5.3E-06 48.1 8.7 82 111-198 4-100 (321)
367 4f2g_A Otcase 1, ornithine car 94.0 0.072 2.5E-06 52.6 6.3 67 107-186 151-224 (309)
368 2f00_A UDP-N-acetylmuramate--L 94.0 0.13 4.4E-06 53.0 8.5 68 109-185 17-85 (491)
369 4ej6_A Putative zinc-binding d 94.0 0.15 5.3E-06 50.2 8.7 94 108-212 181-284 (370)
370 4ep1_A Otcase, ornithine carba 94.0 0.14 4.6E-06 51.3 8.2 71 107-186 176-255 (340)
371 3s2e_A Zinc-containing alcohol 94.0 0.16 5.4E-06 49.2 8.6 93 108-211 165-262 (340)
372 1y1p_A ARII, aldehyde reductas 94.0 0.25 8.7E-06 46.6 9.9 75 106-187 7-92 (342)
373 2fzw_A Alcohol dehydrogenase c 93.9 0.33 1.1E-05 47.6 10.9 92 109-211 190-291 (373)
374 1pqw_A Polyketide synthase; ro 93.9 0.19 6.3E-06 44.5 8.2 93 109-213 38-138 (198)
375 2dph_A Formaldehyde dismutase; 93.8 0.081 2.8E-06 52.6 6.4 95 109-211 185-298 (398)
376 1f8f_A Benzyl alcohol dehydrog 93.7 0.14 4.8E-06 50.3 7.8 93 109-212 190-289 (371)
377 1kol_A Formaldehyde dehydrogen 93.7 0.14 4.8E-06 50.7 7.9 96 109-212 185-300 (398)
378 3dqp_A Oxidoreductase YLBE; al 93.7 0.072 2.5E-06 47.7 5.2 69 112-189 1-74 (219)
379 3h8v_A Ubiquitin-like modifier 93.7 0.31 1.1E-05 47.5 10.1 44 98-148 24-68 (292)
380 3uko_A Alcohol dehydrogenase c 93.6 0.26 8.7E-06 48.6 9.6 92 109-211 193-294 (378)
381 1oth_A Protein (ornithine tran 93.6 0.19 6.4E-06 49.8 8.5 69 107-186 152-231 (321)
382 3hhp_A Malate dehydrogenase; M 93.6 0.15 5.2E-06 50.0 7.7 72 112-187 1-78 (312)
383 3dhn_A NAD-dependent epimerase 93.5 0.081 2.8E-06 47.4 5.3 71 111-189 4-78 (227)
384 1qyd_A Pinoresinol-lariciresin 93.5 0.18 6.2E-06 47.3 7.9 73 111-189 4-87 (313)
385 1ml4_A Aspartate transcarbamoy 93.5 0.12 4E-06 51.0 6.8 72 107-187 152-230 (308)
386 3gg2_A Sugar dehydrogenase, UD 93.5 0.24 8.2E-06 50.8 9.4 95 106-214 314-421 (450)
387 3i6i_A Putative leucoanthocyan 93.5 0.19 6.7E-06 48.2 8.2 81 112-198 11-106 (346)
388 1e3j_A NADP(H)-dependent ketos 93.5 0.36 1.2E-05 47.0 10.2 92 109-211 168-270 (352)
389 3uog_A Alcohol dehydrogenase; 93.4 0.11 3.7E-06 51.0 6.4 92 109-212 189-287 (363)
390 3gaz_A Alcohol dehydrogenase s 93.4 0.19 6.7E-06 48.8 8.1 91 109-213 150-247 (343)
391 1pl8_A Human sorbitol dehydrog 93.3 0.33 1.1E-05 47.4 9.6 92 109-211 171-272 (356)
392 4dpl_A Malonyl-COA/succinyl-CO 93.2 0.22 7.5E-06 49.9 8.4 88 112-213 8-111 (359)
393 4dpk_A Malonyl-COA/succinyl-CO 93.2 0.22 7.5E-06 49.9 8.4 88 112-213 8-111 (359)
394 4amu_A Ornithine carbamoyltran 93.2 0.21 7.2E-06 50.4 8.2 70 107-185 177-258 (365)
395 3grf_A Ornithine carbamoyltran 93.2 0.22 7.5E-06 49.5 8.2 70 107-185 158-241 (328)
396 4gx0_A TRKA domain protein; me 93.2 0.15 5.2E-06 53.1 7.4 89 112-209 349-440 (565)
397 2wm3_A NMRA-like family domain 93.1 0.35 1.2E-05 45.2 9.3 71 112-188 6-82 (299)
398 3d6n_B Aspartate carbamoyltran 93.1 0.098 3.4E-06 51.2 5.5 70 107-189 143-215 (291)
399 1pjq_A CYSG, siroheme synthase 93.1 0.39 1.3E-05 49.3 10.3 87 101-197 4-92 (457)
400 1rjw_A ADH-HT, alcohol dehydro 93.0 0.34 1.2E-05 46.9 9.2 92 109-211 164-260 (339)
401 1t4b_A Aspartate-semialdehyde 92.9 0.17 5.9E-06 50.7 7.1 91 111-213 1-99 (367)
402 1iz0_A Quinone oxidoreductase; 92.9 0.12 4E-06 49.2 5.6 90 109-211 125-217 (302)
403 3fpf_A Mtnas, putative unchara 92.9 0.46 1.6E-05 46.5 9.9 93 106-209 119-219 (298)
404 1kyq_A Met8P, siroheme biosynt 92.9 0.31 1.1E-05 47.1 8.6 37 106-149 9-45 (274)
405 4g65_A TRK system potassium up 92.8 1 3.5E-05 46.2 12.9 96 112-214 236-336 (461)
406 3ruf_A WBGU; rossmann fold, UD 92.8 0.36 1.2E-05 46.1 9.0 74 107-187 22-109 (351)
407 3qwb_A Probable quinone oxidor 92.8 0.2 6.9E-06 48.3 7.2 93 108-212 147-247 (334)
408 4a0s_A Octenoyl-COA reductase/ 92.7 0.39 1.3E-05 48.3 9.5 89 108-212 219-336 (447)
409 2c0c_A Zinc binding alcohol de 92.6 0.33 1.1E-05 47.6 8.6 93 109-213 163-262 (362)
410 4b7c_A Probable oxidoreductase 92.6 0.23 7.9E-06 47.8 7.4 93 109-213 149-249 (336)
411 3jyn_A Quinone oxidoreductase; 92.6 0.23 8E-06 47.7 7.4 93 108-212 139-239 (325)
412 3hn7_A UDP-N-acetylmuramate-L- 92.6 0.3 1E-05 50.9 8.7 71 106-185 15-87 (524)
413 3fpc_A NADP-dependent alcohol 92.5 0.14 4.9E-06 49.8 5.8 94 108-212 165-266 (352)
414 3fbg_A Putative arginate lyase 92.5 0.3 1E-05 47.4 8.1 94 109-213 150-249 (346)
415 3slg_A PBGP3 protein; structur 92.5 0.16 5.6E-06 49.0 6.1 80 101-186 15-99 (372)
416 1sb8_A WBPP; epimerase, 4-epim 92.5 0.41 1.4E-05 45.8 9.0 74 107-187 24-111 (352)
417 7mdh_A Protein (malate dehydro 92.5 0.66 2.3E-05 46.8 10.7 69 112-186 33-116 (375)
418 2ef0_A Ornithine carbamoyltran 92.5 0.34 1.2E-05 47.6 8.3 70 107-187 151-222 (301)
419 2ph5_A Homospermidine synthase 92.4 0.18 6.2E-06 52.6 6.7 92 112-212 14-114 (480)
420 2r00_A Aspartate-semialdehyde 92.4 0.14 4.8E-06 50.6 5.6 90 111-213 3-97 (336)
421 2h1q_A Hypothetical protein; Z 92.4 0.3 1E-05 47.2 7.8 87 99-209 130-216 (270)
422 1uuf_A YAHK, zinc-type alcohol 92.4 0.15 5.1E-06 50.4 5.7 90 109-211 194-287 (369)
423 2o7s_A DHQ-SDH PR, bifunctiona 92.4 0.14 4.8E-06 53.4 5.8 48 107-161 361-408 (523)
424 4eye_A Probable oxidoreductase 92.4 0.21 7.3E-06 48.5 6.8 90 109-211 159-256 (342)
425 2hcy_A Alcohol dehydrogenase 1 92.3 0.4 1.4E-05 46.5 8.7 92 109-211 169-268 (347)
426 4a7p_A UDP-glucose dehydrogena 92.3 0.28 9.4E-06 50.5 7.9 94 106-214 318-424 (446)
427 3tqh_A Quinone oxidoreductase; 92.3 0.21 7.1E-06 48.0 6.5 92 108-212 151-245 (321)
428 3sds_A Ornithine carbamoyltran 92.3 0.35 1.2E-05 48.5 8.3 69 107-186 185-266 (353)
429 1piw_A Hypothetical zinc-type 92.3 0.11 3.9E-06 50.8 4.7 94 109-211 179-275 (360)
430 3gms_A Putative NADPH:quinone 92.2 0.34 1.2E-05 46.9 8.0 93 108-212 143-243 (340)
431 1yqd_A Sinapyl alcohol dehydro 92.2 0.16 5.5E-06 50.0 5.7 89 109-211 187-281 (366)
432 3q2o_A Phosphoribosylaminoimid 92.2 0.13 4.3E-06 51.0 5.0 68 106-184 10-81 (389)
433 1v3u_A Leukotriene B4 12- hydr 92.2 0.37 1.3E-05 46.3 8.2 92 109-212 145-244 (333)
434 3cps_A Glyceraldehyde 3-phosph 92.1 0.45 1.6E-05 47.7 8.9 99 106-213 12-139 (354)
435 3hsk_A Aspartate-semialdehyde 92.0 0.37 1.3E-05 48.7 8.2 88 112-213 20-125 (381)
436 2yfk_A Aspartate/ornithine car 91.9 0.36 1.2E-05 49.5 8.1 71 107-186 185-271 (418)
437 3gpi_A NAD-dependent epimerase 91.9 0.24 8.1E-06 46.1 6.3 66 112-188 4-73 (286)
438 1gtm_A Glutamate dehydrogenase 91.9 0.15 5.2E-06 52.1 5.3 35 108-149 210-245 (419)
439 3r7f_A Aspartate carbamoyltran 91.8 0.3 1E-05 48.1 7.1 65 107-186 144-211 (304)
440 4dup_A Quinone oxidoreductase; 91.8 0.32 1.1E-05 47.4 7.4 92 109-212 167-265 (353)
441 2fk8_A Methoxy mycolic acid sy 91.8 0.98 3.4E-05 42.8 10.6 91 108-210 89-192 (318)
442 2q3e_A UDP-glucose 6-dehydroge 91.8 0.59 2E-05 47.8 9.6 96 107-214 326-445 (467)
443 3m2p_A UDP-N-acetylglucosamine 91.7 0.22 7.6E-06 46.9 5.9 66 112-187 3-71 (311)
444 3e05_A Precorrin-6Y C5,15-meth 91.6 1 3.5E-05 39.7 9.8 93 108-211 39-141 (204)
445 4ffl_A PYLC; amino acid, biosy 91.6 0.19 6.4E-06 49.0 5.4 32 111-148 1-32 (363)
446 4a8t_A Putrescine carbamoyltra 91.6 0.4 1.4E-05 47.8 7.8 70 107-186 172-250 (339)
447 2pzm_A Putative nucleotide sug 91.5 0.21 7.1E-06 47.7 5.5 77 104-187 14-97 (330)
448 1y7t_A Malate dehydrogenase; N 91.5 0.25 8.6E-06 47.9 6.1 68 112-186 5-88 (327)
449 3csu_A Protein (aspartate carb 91.4 0.5 1.7E-05 46.6 8.2 72 107-186 151-229 (310)
450 4id9_A Short-chain dehydrogena 91.4 0.35 1.2E-05 46.1 6.9 68 106-187 15-86 (347)
451 3g79_A NDP-N-acetyl-D-galactos 91.4 0.44 1.5E-05 49.5 8.2 91 107-214 350-452 (478)
452 2b5w_A Glucose dehydrogenase; 91.4 0.44 1.5E-05 46.5 7.8 94 108-212 171-273 (357)
453 2hjs_A USG-1 protein homolog; 91.4 0.15 5.2E-06 50.5 4.5 90 112-213 7-100 (340)
454 4fs3_A Enoyl-[acyl-carrier-pro 91.3 0.48 1.7E-05 44.2 7.7 38 107-151 3-43 (256)
455 3goh_A Alcohol dehydrogenase, 91.3 0.25 8.5E-06 47.3 5.8 88 109-212 142-229 (315)
456 3q98_A Transcarbamylase; rossm 91.2 0.49 1.7E-05 48.2 8.2 72 106-186 187-274 (399)
457 3gqv_A Enoyl reductase; medium 91.2 1.4 4.9E-05 43.2 11.4 93 108-212 163-263 (371)
458 4a8p_A Putrescine carbamoyltra 91.1 0.46 1.6E-05 47.7 7.7 70 107-186 150-228 (355)
459 2bka_A CC3, TAT-interacting pr 91.1 0.23 8E-06 44.8 5.1 73 108-188 16-94 (242)
460 4gx0_A TRKA domain protein; me 91.1 0.91 3.1E-05 47.1 10.3 72 112-191 128-204 (565)
461 1qor_A Quinone oxidoreductase; 91.1 0.39 1.3E-05 46.0 6.9 92 109-212 140-239 (327)
462 1orr_A CDP-tyvelose-2-epimeras 91.0 0.84 2.9E-05 43.1 9.2 71 111-187 1-82 (347)
463 3jv7_A ADH-A; dehydrogenase, n 91.0 0.53 1.8E-05 45.5 7.9 93 108-212 170-270 (345)
464 4dvj_A Putative zinc-dependent 90.9 0.82 2.8E-05 44.8 9.3 91 109-211 171-269 (363)
465 2q1s_A Putative nucleotide sug 90.8 0.31 1E-05 47.5 6.0 76 106-188 28-109 (377)
466 2o3j_A UDP-glucose 6-dehydroge 90.8 1.1 3.8E-05 46.1 10.5 97 107-214 332-449 (481)
467 2j3h_A NADP-dependent oxidored 90.6 0.51 1.7E-05 45.5 7.4 92 109-212 155-255 (345)
468 3pwk_A Aspartate-semialdehyde 90.6 0.15 5.3E-06 51.2 3.7 87 112-213 3-96 (366)
469 3u95_A Glycoside hydrolase, fa 90.6 0.37 1.3E-05 49.9 6.7 74 112-186 1-84 (477)
470 2x5o_A UDP-N-acetylmuramoylala 90.6 0.14 4.7E-06 52.0 3.4 69 108-186 3-72 (439)
471 1wly_A CAAR, 2-haloacrylate re 90.6 0.49 1.7E-05 45.5 7.2 92 109-212 145-244 (333)
472 3l5o_A Uncharacterized protein 90.4 0.65 2.2E-05 44.9 7.8 88 98-209 129-216 (270)
473 1vj0_A Alcohol dehydrogenase, 90.3 0.49 1.7E-05 46.7 7.1 92 109-211 195-297 (380)
474 1y8q_A Ubiquitin-like 1 activa 90.3 1.3 4.3E-05 43.9 10.0 88 105-199 31-146 (346)
475 3oh8_A Nucleoside-diphosphate 90.3 1.4 4.7E-05 45.3 10.7 62 112-187 148-210 (516)
476 3m6i_A L-arabinitol 4-dehydrog 90.2 1.1 3.9E-05 43.5 9.5 93 108-211 178-282 (363)
477 3o38_A Short chain dehydrogena 90.2 0.38 1.3E-05 44.4 5.8 39 106-151 18-58 (266)
478 2vn8_A Reticulon-4-interacting 89.9 1.7 5.9E-05 42.5 10.7 95 108-213 182-281 (375)
479 1zsy_A Mitochondrial 2-enoyl t 89.9 1.4 4.8E-05 42.9 9.9 90 109-213 167-271 (357)
480 3orq_A N5-carboxyaminoimidazol 89.8 0.19 6.5E-06 49.8 3.6 35 108-149 10-44 (377)
481 1yb5_A Quinone oxidoreductase; 89.7 0.87 3E-05 44.4 8.2 91 109-211 170-268 (351)
482 2y0c_A BCEC, UDP-glucose dehyd 89.6 1.6 5.3E-05 45.1 10.4 93 107-214 325-441 (478)
483 4hb9_A Similarities with proba 89.6 0.31 1.1E-05 46.9 4.9 32 112-149 2-33 (412)
484 1kpg_A CFA synthase;, cyclopro 89.6 2 6.9E-05 39.8 10.3 89 109-210 64-166 (287)
485 4e4t_A Phosphoribosylaminoimid 89.6 0.29 9.7E-06 49.5 4.7 68 107-184 32-102 (419)
486 2nxc_A L11 mtase, ribosomal pr 89.5 1 3.5E-05 41.8 8.3 90 109-211 120-217 (254)
487 1xgk_A Nitrogen metabolite rep 89.5 0.96 3.3E-05 44.1 8.4 71 112-188 6-83 (352)
488 3rui_A Ubiquitin-like modifier 89.5 1.1 3.7E-05 44.7 8.7 36 105-147 29-65 (340)
489 3aog_A Glutamate dehydrogenase 89.5 0.66 2.3E-05 47.8 7.4 32 106-144 231-262 (440)
490 1l3i_A Precorrin-6Y methyltran 89.5 1 3.5E-05 38.3 7.6 91 108-211 32-133 (192)
491 2qrj_A Saccharopine dehydrogen 89.4 0.17 5.8E-06 51.5 3.0 79 112-212 215-300 (394)
492 3e48_A Putative nucleoside-dip 89.3 1.1 3.8E-05 41.4 8.3 71 112-188 1-75 (289)
493 2x5j_O E4PDH, D-erythrose-4-ph 89.3 0.99 3.4E-05 44.8 8.3 93 112-213 3-126 (339)
494 2a9f_A Putative malic enzyme ( 89.3 0.63 2.2E-05 47.4 7.0 93 107-212 185-289 (398)
495 3tz6_A Aspartate-semialdehyde 89.2 0.28 9.7E-06 48.9 4.4 87 112-213 2-95 (344)
496 3nkl_A UDP-D-quinovosamine 4-d 89.2 0.72 2.5E-05 38.5 6.3 92 112-214 5-101 (141)
497 2x4g_A Nucleoside-diphosphate- 89.1 0.67 2.3E-05 43.8 6.8 69 112-187 14-86 (342)
498 3h5n_A MCCB protein; ubiquitin 89.1 0.81 2.8E-05 45.4 7.6 37 105-148 113-150 (353)
499 3hm2_A Precorrin-6Y C5,15-meth 89.1 1.7 5.7E-05 36.9 8.6 91 109-211 25-126 (178)
500 5mdh_A Malate dehydrogenase; o 89.0 0.33 1.1E-05 48.0 4.6 69 112-186 4-87 (333)
No 1
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=100.00 E-value=4.4e-81 Score=649.12 Aligned_cols=345 Identities=85% Similarity=1.301 Sum_probs=323.9
Q ss_pred CccccccccchhhHhhhhhcccchhhhccCcccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEe
Q 014863 68 TPFLLDFETSVFKKDMISLADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGL 147 (417)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~g~~~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~ 147 (417)
.+++++|||++|.+++++|+|+.|++|++|+|+|++++++|+|||||+|||+|+||+++|++|+++++++|+|++|++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~g~~E~v~~~~~w~~~~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~ 90 (525)
T 3fr7_A 11 AMPSLDFDTSVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGL 90 (525)
T ss_dssp ----CCCCCSSSCEEEEEETTEEEEEEECCGGGGGGHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred cccccccccccceeeEeecCCcceEEEeccccccccChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEe
Confidence 45679999999999999999999999999999999999999999999999999999999999999988888999999999
Q ss_pred cCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCC
Q 014863 148 RKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFP 227 (417)
Q Consensus 148 r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~ 227 (417)
+.++++++.|.+.|+...++++.+++|++++||+|||++||+.+.+++++|+|+|++|++|+++|||+++++++.++.+|
T Consensus 91 r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaVP~~~~~eVl~eI~p~LK~GaILs~AaGf~I~~le~~~i~~p 170 (525)
T 3fr7_A 91 RKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFP 170 (525)
T ss_dssp CTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEESSSHHHHHHHHTTCCCC
T ss_pred CCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECCChHHHHHHHHHHHHhcCCCCeEEEeCCCCHHHHhhhcccCC
Confidence 98888899999999984223346899999999999999999999999999999999999999999999998876567889
Q ss_pred CCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccc
Q 014863 228 KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG 307 (417)
Q Consensus 228 ~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqt 307 (417)
++++|||+|||+|+++||++|++|+++||+|++++|++++|+++++++++++|+.++|+.++++|+|++|+++|+|++|+
T Consensus 171 ~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqt 250 (525)
T 3fr7_A 171 KNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERG 250 (525)
T ss_dssp TTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHT
T ss_pred CCCcEEEEecCCCchhHHHHHhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhcccCchhhhhhhhhhccChhHHHHHHH
Q 014863 308 ILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYE 387 (417)
Q Consensus 308 vL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~~l~~~~~~li~e~G~~~l~~~vs~~~~~~~~~~~~~~~~~~~~~m~~ 387 (417)
+|||++|++++++||++|++||+|++||++|+|+++|+|+|||+++|+.+|+++||+|++++||++|+..+.|+|++|+|
T Consensus 251 vLsG~~pAlieA~~d~lVe~G~~pe~Ay~~~~qel~~~i~~li~e~G~~~m~~~~S~ta~~~~~~~~~~~~~~~~~~m~~ 330 (525)
T 3fr7_A 251 ILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYE 330 (525)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTHHHHHHHHHCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCcHHHHHHHHHhccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888899999988778899999999
Q ss_pred HHHhhhcchhHHHHHHcCCcc-cccc
Q 014863 388 CYEDVAAGSEIRSVVLAGRRF-YVSS 412 (417)
Q Consensus 388 ~~~~v~~g~~~~~~~~~~~~~-~~~~ 412 (417)
||++||+|+|+|+||++|+|+ ||..
T Consensus 331 ~~~~i~~G~~~~~~~~~~~~~~~~~~ 356 (525)
T 3fr7_A 331 CYEDVASGSEIRSVVLAGRRFYEKEG 356 (525)
T ss_dssp HHHHHHHSHHHHHHHHHHHTTSCBTT
T ss_pred HHHHHhCCHHHHHHHHhcCccchhcc
Confidence 999999999999999998865 5543
No 2
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=100.00 E-value=1.8e-75 Score=598.43 Aligned_cols=314 Identities=26% Similarity=0.385 Sum_probs=295.5
Q ss_pred ccccccchhhHhhhh-----hcccchhhhccCcccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEE
Q 014863 71 LLDFETSVFKKDMIS-----LADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV 145 (417)
Q Consensus 71 ~~~~~~~~~~~~~~~-----~~~~~e~~~~~g~~~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Viv 145 (417)
.|||||++||+|+.+ ||+++| |.++++.|+| |||+|||||+||+++|+||||| |++|+|
T Consensus 2 ~ny~n~l~~~~~~~~~~~c~~m~~~e---------F~~~~~~lkg-K~IaVIGyGsQG~AqAlNLRDS------Gv~V~V 65 (491)
T 3ulk_A 2 ANYFNTLNLRQQLAQLGKCRFMGRDE---------FADGASYLQG-KKVVIVGCGAQGLNQGLNMRDS------GLDISY 65 (491)
T ss_dssp CCTGGGSCHHHHHHHHTCCEECCGGG---------GTTTTGGGTT-SEEEEESCSHHHHHHHHHHHHT------TCEEEE
T ss_pred cchhccccHHHHHHHhccceeccHHH---------hcchhHHHcC-CEEEEeCCChHhHHHHhHHHhc------CCcEEE
Confidence 599999999999988 888888 9999999999 9999999999999999999999 999999
Q ss_pred EecCCc-----hhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccchhhhhh
Q 014863 146 GLRKGS-----RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQ 220 (417)
Q Consensus 146 g~r~~~-----~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~ 220 (417)
++|+++ +||++|+++||. +.+++|++++||+|++++||..|.++|++|.|+|++|++|.++|||++++.
T Consensus 66 glr~~s~~e~~~S~~~A~~~Gf~-----v~~~~eA~~~ADvV~~L~PD~~q~~vy~~I~p~lk~G~~L~faHGFnI~~~- 139 (491)
T 3ulk_A 66 ALRKEAIAEKRASWRKATENGFK-----VGTYEELIPQADLVINLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEV- 139 (491)
T ss_dssp EECHHHHHTTCHHHHHHHHTTCE-----EEEHHHHGGGCSEEEECSCGGGHHHHHHHHGGGSCTTCEEEESSCHHHHTT-
T ss_pred EeCCCCcccccchHHHHHHCCCE-----ecCHHHHHHhCCEEEEeCChhhHHHHHHHHHhhCCCCCEEEecCccccccc-
Confidence 999544 899999999999 578999999999999999999999999999999999999999999999875
Q ss_pred ccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeec--CCCCHHHHHHHHHHHHHhCCCc--ccccchhh
Q 014863 221 SMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH--QDVDGRATNVALGWSVALGSPF--TFATTLEQ 296 (417)
Q Consensus 221 ~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~--qd~sgea~e~a~al~~aiG~~~--~iett~~~ 296 (417)
++.||+|+|||+|+||+||+.||++|++| +|+|++|+|| ||++|++++++++|+.++|++| +++|||++
T Consensus 140 --~i~pp~dvdVimVAPKgpG~~VR~~y~~G-----~GvP~liAVhqeqD~sG~a~~~AlayA~aiG~~raGvieTTF~e 212 (491)
T 3ulk_A 140 --GEQIRKDITVVMVAPKCPGTEVREEYKRG-----FGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVA 212 (491)
T ss_dssp --CCCCCTTSEEEEEEESSCHHHHHHHHHTT-----CCCCEEEEECGGGCTTSCHHHHHHHHHHHHTGGGTCEEECCHHH
T ss_pred --ccccCCCcceEEeCCCCCcHHHHHHHHcC-----CCCceEEEEEeCCCCchhHHHHHHHHHHhcCCCcCceeeccHHH
Confidence 46999999999999999999999999996 8999999997 8999999999999999999986 79999999
Q ss_pred hhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhcccCchhhhhhhhhhc
Q 014863 297 EYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSA 376 (417)
Q Consensus 297 E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~~l~~~~~~li~e~G~~~l~~~vs~~~~~~~~~~~~~ 376 (417)
|+++||||||++|||+++++++++||++|++||+|++|++++.++++ +|+|||+++|+.+|+++|| +|++||++...
T Consensus 213 EtetDLfGEQaVLcGgl~~li~agFetLveaGy~P~~a~~~~~~e~k-lIvdli~egGi~~M~~siS--~TAe~G~~~~~ 289 (491)
T 3ulk_A 213 EVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWE-TITEALKQGGITLMMDRLS--NPAKLRAYALS 289 (491)
T ss_dssp HHHHHHHHHHTTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTSC--HHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-HHHHHHHhCCHHHHHHhcC--chhhccchhhh
Confidence 99999999999999999999999999999999999999999888887 9999999999999999999 78899998443
Q ss_pred -c-ChhHHHHHHHHHHhhhcchhHHHHHHcCCcccccccccc
Q 014863 377 -S-YYPCMEILYECYEDVAAGSEIRSVVLAGRRFYVSSYRLR 416 (417)
Q Consensus 377 -~-~~~~~~~m~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~ 416 (417)
+ .+..++.|+++|++||+|+|+|+|+.+++..+++...||
T Consensus 290 ~~~~~~~k~~~~~~l~~I~sG~Fa~~~~~e~~~g~~~l~~~R 331 (491)
T 3ulk_A 290 EQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWR 331 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhCCcchHHHHHHHHcCChhHHHHH
Confidence 3 445678999999999999999999999999998887776
No 3
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=100.00 E-value=1.3e-39 Score=324.72 Aligned_cols=281 Identities=29% Similarity=0.515 Sum_probs=248.6
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
..+++ +||+|||+|+||.++|++|+++ |++|++++++.+++++.+.+.|+.. . +.++++++||+|+++
T Consensus 12 ~~l~~-~~I~IIG~G~mG~alA~~L~~~------G~~V~~~~~~~~~~~~~a~~~G~~~----~-~~~e~~~~aDvVila 79 (338)
T 1np3_A 12 SIIQG-KKVAIIGYGSQGHAHACNLKDS------GVDVTVGLRSGSATVAKAEAHGLKV----A-DVKTAVAAADVVMIL 79 (338)
T ss_dssp HHHHT-SCEEEECCSHHHHHHHHHHHHT------TCCEEEECCTTCHHHHHHHHTTCEE----E-CHHHHHHTCSEEEEC
T ss_pred chhcC-CEEEEECchHHHHHHHHHHHHC------cCEEEEEECChHHHHHHHHHCCCEE----c-cHHHHHhcCCEEEEe
Confidence 46788 8999999999999999999999 9998888887666678888899874 3 888999999999999
Q ss_pred ecchhHHHHHH-HHHhcCCCCcEEEEeccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEe
Q 014863 186 ISDAAQADNYE-KIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 186 vpd~a~~~Vl~-eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~lia 264 (417)
+|+..+.++++ ++.+++++|++|++++|+++ .... +.++.+++|+++||++|++.++++|+.| .|.+++++
T Consensus 80 vp~~~~~~v~~~~i~~~l~~~~ivi~~~gv~~-~~~~--~~~~~~~~vv~~~P~gp~~a~~~l~~~G-----~g~~~ii~ 151 (338)
T 1np3_A 80 TPDEFQGRLYKEEIEPNLKKGATLAFAHGFSI-HYNQ--VVPRADLDVIMIAPKAPGHTVRSEFVKG-----GGIPDLIA 151 (338)
T ss_dssp SCHHHHHHHHHHHTGGGCCTTCEEEESCCHHH-HTTS--SCCCTTCEEEEEEESSCSHHHHHHHHTT-----CCCCEEEE
T ss_pred CCcHHHHHHHHHHHHhhCCCCCEEEEcCCchh-HHHh--hcCCCCcEEEeccCCCCchhHHHHHhcc-----CCCeEEEE
Confidence 99999999998 99999999999999999987 4433 3346788999999999999999999975 89999999
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCc--ccccchhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 014863 265 VHQDVDGRATNVALGWSVALGSPF--TFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI 342 (417)
Q Consensus 265 v~qd~sgea~e~a~al~~aiG~~~--~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~~l 342 (417)
++++.++++.+.+..|+..+|..+ ++++++.+|++.|+|+++++|||++|+++...++.+++.|+++++||++++++.
T Consensus 152 ~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a~~e~~~~~ 231 (338)
T 1np3_A 152 IYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMAYFECLHEL 231 (338)
T ss_dssp EEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTTH
T ss_pred ecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHhhhHH
Confidence 999999999999999999999755 788899999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhcHHHHHhcccCchhhhhhhhhhc-c--ChhHHHHHHHHHHhhhcchhHHHHHHcCCccc
Q 014863 343 TGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSA-S--YYPCMEILYECYEDVAAGSEIRSVVLAGRRFY 409 (417)
Q Consensus 343 ~~~~~~li~e~G~~~l~~~vs~~~~~~~~~~~~~-~--~~~~~~~m~~~~~~v~~g~~~~~~~~~~~~~~ 409 (417)
. .+.++|..+|+..|+...+ +.+.|++.... + .+..++.|+++++.|++|+|+++|+.+++...
T Consensus 232 ~-~~~~~~~~gg~~~~r~a~s--~p~~~~d~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~r 298 (338)
T 1np3_A 232 K-LIVDLMYEGGIANMNYSIS--NNAEYGEYVTGPEVINAESRAAMRNALKRIQDGEYAKMFITEGAANY 298 (338)
T ss_dssp H-HHHHHHHHHHHHHHHHHSC--HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTS
T ss_pred H-HHHHHHHhcCHHHHHHhcC--CHHHHhhhhcCCccccHHHHHHHHHHHHHHhCCHHHHHHHHHHhccc
Confidence 7 9999999999988877666 56689997543 2 35678899999999999999999999776543
No 4
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.98 E-value=8.1e-32 Score=261.75 Aligned_cols=221 Identities=16% Similarity=0.133 Sum_probs=189.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc---eEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~---~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd 188 (417)
+||+|||+|+||.+++++|.++ |+ +|++++|+.++..+.+.+.|+.. ..++.++++++|+||+++||
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~------g~~~~~V~v~dr~~~~~~~l~~~~gi~~----~~~~~~~~~~aDvVilav~p 73 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN------GYDPNRICVTNRSLDKLDFFKEKCGVHT----TQDNRQGALNADVVVLAVKP 73 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT------TCCGGGEEEECSSSHHHHHHHHTTCCEE----ESCHHHHHSSCSEEEECSCG
T ss_pred CEEEEEcccHHHHHHHHHHHHC------CCCCCeEEEEeCCHHHHHHHHHHcCCEE----eCChHHHHhcCCeEEEEeCH
Confidence 7899999999999999999999 87 88888777555444444458875 56889999999999999999
Q ss_pred hhHHHHHHHHHhc-CCCCcE-EEEeccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeec
Q 014863 189 AAQADNYEKIFSC-MKPNSI-LGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (417)
Q Consensus 189 ~a~~~Vl~eI~p~-Lk~Gai-L~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~ 266 (417)
+...+++++|.++ ++++++ |++++|+++..++. .++.+.+++++|||+|... |.|++. +++.
T Consensus 74 ~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~---~l~~~~~vvr~mPn~p~~v------------~~g~~~-l~~~ 137 (280)
T 3tri_A 74 HQIKMVCEELKDILSETKILVISLAVGVTTPLIEK---WLGKASRIVRAMPNTPSSV------------RAGATG-LFAN 137 (280)
T ss_dssp GGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHH---HHTCCSSEEEEECCGGGGG------------TCEEEE-EECC
T ss_pred HHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHH---HcCCCCeEEEEecCChHHh------------cCccEE-EEeC
Confidence 9999999999998 888865 55889999887765 5566779999999999887 578886 5668
Q ss_pred CCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 014863 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECI 342 (417)
Q Consensus 267 qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a----~iea~~~~~v~~Gl~~e~A~~~~~~~l 342 (417)
.+++.++.+.+..++..+|....+ .+| ++++..++++|++|+ +++++.+.+++.|+++++|++++.|++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~~~v----~~E---~~~d~~talsgsgpa~~~~~~eal~~a~v~~Gl~~~~a~~l~~~t~ 210 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLVIWV----SSE---DQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTV 210 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEEEEC----SSH---HHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEE----CCH---HHhhHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 889999999999999999963111 133 567788999999999 579999999999999999999999999
Q ss_pred HHHHHHHHHHhcH--HHHHhcccCch
Q 014863 343 TGIISKIISTQGM--LAVYNSFSGED 366 (417)
Q Consensus 343 ~~~~~~li~e~G~--~~l~~~vs~~~ 366 (417)
. |+++|+.++|. ..|+|+||+|.
T Consensus 211 ~-G~a~~~~~~~~~p~~l~~~v~spg 235 (280)
T 3tri_A 211 L-GAARMALETEQSVVQLRQFVTSPG 235 (280)
T ss_dssp H-HHHHHHHTCSSCHHHHHHHHCCTT
T ss_pred H-HHHHHHHhcCCCHHHHHHhccCCC
Confidence 9 99999999997 89999999995
No 5
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.96 E-value=1.2e-29 Score=240.46 Aligned_cols=221 Identities=19% Similarity=0.262 Sum_probs=173.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc----eEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI----VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~----~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavp 187 (417)
+||+|||+|+||.+++++|.++ |+ +|++++|+.++..+.+.+.|+.. ..++.|+++++|+||+++|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~------g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~~~e~~~~aDvVilav~ 72 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK------NIVSSNQIICSDLNTANLKNASEKYGLTT----TTDNNEVAKNADILILSIK 72 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSCHHHHHHHCSEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhC------CCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCChHHHHHhCCEEEEEeC
Confidence 7899999999999999999999 87 88887776444334444568875 5789999999999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE-EeccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeec
Q 014863 188 DAAQADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~-~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~ 266 (417)
|+...++++++.++++++++|+ +++|+++..++. .++.+.+++++|||.|... |.|... +++.
T Consensus 73 ~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~---~~~~~~~~v~~~p~~p~~~------------~~g~~~-~~~~ 136 (247)
T 3gt0_A 73 PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTEN---AFNKKVKVVRVMPNTPALV------------GEGMSA-LCPN 136 (247)
T ss_dssp TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHH---HHCSCCEEEEEECCGGGGG------------TCEEEE-EEEC
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHH---HhCCCCcEEEEeCChHHHH------------cCceEE-EEeC
Confidence 9999999999999999998754 889998776655 4456778999999999876 467765 6667
Q ss_pred CCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 014863 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECI 342 (417)
Q Consensus 267 qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a----~iea~~~~~v~~Gl~~e~A~~~~~~~l 342 (417)
...+.+..+.++.++..+|.. +.. .| +.++..+.++|++|+ ++|++.+.+++.|+++++|++.+.+++
T Consensus 137 ~~~~~~~~~~~~~l~~~~G~~--~~~---~e---~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~ 208 (247)
T 3gt0_A 137 EMVTEKDLEDVLNIFNSFGQT--EIV---SE---KLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAV 208 (247)
T ss_dssp TTCCHHHHHHHHHHHGGGEEE--EEC---CG---GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCE--EEe---CH---HHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 788999999999999999963 222 33 456677889999998 688999999999999999999999999
Q ss_pred HHHHHHHHHHhcH--HHHHhcccCchh
Q 014863 343 TGIISKIISTQGM--LAVYNSFSGEDK 367 (417)
Q Consensus 343 ~~~~~~li~e~G~--~~l~~~vs~~~~ 367 (417)
. ++++|+.++|. ..|+|+||||.-
T Consensus 209 ~-gs~~~~~~~~~~p~~l~~~v~spgG 234 (247)
T 3gt0_A 209 L-GSAKMVLETGIHPGELKDMVCSPGG 234 (247)
T ss_dssp H-HHHHHHHHSCC--------------
T ss_pred H-HHHHHHHHcCCCHHHHHHhcCCCCc
Confidence 9 99999999997 999999999963
No 6
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.92 E-value=5.1e-24 Score=210.08 Aligned_cols=222 Identities=14% Similarity=0.103 Sum_probs=177.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC----ceEEEEecCCc-hhHHHHHHcCceecCCCcCCHHhhhccCCeEEEee
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD----IVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G----~~Vivg~r~~~-~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLav 186 (417)
|||+|||+|+||.++|.+|.++ | ++|++++|..+ ...+...+.|+.. ..++.++++++|+||++|
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~------G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~----~~~~~e~~~~aDvVilav 92 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA------GVLAAHKIMASSPDMDLATVSALRKMGVKL----TPHNKETVQHSDVLFLAV 92 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT------TSSCGGGEEEECSCTTSHHHHHHHHHTCEE----ESCHHHHHHHCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCCcceEEEECCCccHHHHHHHHHcCCEE----eCChHHHhccCCEEEEEe
Confidence 7899999999999999999998 8 68888777643 2455556678875 467889999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEe-ccchhhhhhccc-cCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEe
Q 014863 187 SDAAQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMG-LDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL~~a-~G~~i~~~~~~~-i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~lia 264 (417)
||+...++++++.+.++++++|+++ .|+....+.+.. -.++ +.+|++.||++|... +.|.. +++
T Consensus 93 ~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~-~~~vv~~~p~~p~~~------------~~g~~-v~~ 158 (322)
T 2izz_A 93 KPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRP-APRVIRCMTNTPVVV------------REGAT-VYA 158 (322)
T ss_dssp CGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSS-CCEEEEEECCGGGGG------------TCEEE-EEE
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCC-CCeEEEEeCCcHHHH------------cCCeE-EEE
Confidence 9999999999999999999987755 688765443200 0112 458999999999876 35664 455
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH----HHHHHHHHHHHcCCCHHHHHHHHHH
Q 014863 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVE 340 (417)
Q Consensus 265 v~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a----~iea~~~~~v~~Gl~~e~A~~~~~~ 340 (417)
...+.+.+..+.+..++..+|.. +.. .| +.++..+.++|++|+ +++++.+.+++.|+++++++.++.+
T Consensus 159 ~g~~~~~~~~~~v~~ll~~~G~~--~~~---~e---~~~~~~~a~~g~gpa~~~~~~eala~a~~~~Gl~~~~a~~l~~~ 230 (322)
T 2izz_A 159 TGTHAQVEDGRLMEQLLSSVGFC--TEV---EE---DLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQ 230 (322)
T ss_dssp ECTTCCHHHHHHHHHHHHTTEEE--EEC---CG---GGHHHHHHHTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhCCCE--EEe---CH---HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 56677789999999999999953 111 23 667778889999888 5889999999999999999999999
Q ss_pred HHHHHHHHHHHHhcH--HHHHhcccCch
Q 014863 341 CITGIISKIISTQGM--LAVYNSFSGED 366 (417)
Q Consensus 341 ~l~~~~~~li~e~G~--~~l~~~vs~~~ 366 (417)
++. +.++++.++|. ..+++.+++|.
T Consensus 231 ~~~-g~~~~~~~~~~~p~~l~~~v~sp~ 257 (322)
T 2izz_A 231 ALL-GAAKMLLHSEQHPGQLKDNVSSPG 257 (322)
T ss_dssp HHH-HHHHHHHHCSSCHHHHHHHHCCTT
T ss_pred HHH-HHHHHHHhcCCCHHHHHHhCCCCC
Confidence 998 99999988764 67899998884
No 7
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.89 E-value=6.1e-22 Score=187.41 Aligned_cols=213 Identities=13% Similarity=0.186 Sum_probs=168.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC----ceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD----IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G----~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavp 187 (417)
+||+|||+|+||.+++.+|.++ | ++|.+++|+.++ .|+.. ..++.++++++|+||+++|
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~------g~~~~~~v~~~~~~~~~-------~g~~~----~~~~~~~~~~~D~vi~~v~ 67 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA------NIIKKENLFYYGPSKKN-------TTLNY----MSSNEELARHCDIIVCAVK 67 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TSSCGGGEEEECSSCCS-------SSSEE----CSCHHHHHHHCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCCCCCeEEEEeCCccc-------CceEE----eCCHHHHHhcCCEEEEEeC
Confidence 6899999999999999999998 8 678877776443 57764 4678899999999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeecC
Q 014863 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~q 267 (417)
++...++++++.++++++.+|+++.|+....+.+ .++.+.++++++|+.|... +.| ..+++...
T Consensus 68 ~~~~~~v~~~l~~~l~~~~vv~~~~gi~~~~l~~---~~~~~~~~v~~~p~~p~~~------------~~g-~~~~~~~~ 131 (262)
T 2rcy_A 68 PDIAGSVLNNIKPYLSSKLLISICGGLNIGKLEE---MVGSENKIVWVMPNTPCLV------------GEG-SFIYCSNK 131 (262)
T ss_dssp TTTHHHHHHHSGGGCTTCEEEECCSSCCHHHHHH---HHCTTSEEEEEECCGGGGG------------TCE-EEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHH---HhCCCCcEEEECCChHHHH------------cCC-eEEEEeCC
Confidence 9999999999999995555677889998766654 3455557889999998766 467 55566676
Q ss_pred CCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 014863 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECIT 343 (417)
Q Consensus 268 d~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a----~iea~~~~~v~~Gl~~e~A~~~~~~~l~ 343 (417)
+.+.+..+.+..++..+|. ++.. .+ +.++..+.++++.|+ +++++.+.+++.|++++.++..+.+.+.
T Consensus 132 ~~~~~~~~~~~~ll~~~G~--~~~~---~~---~~~~~~~a~~~~~~~~~~~~~~al~~~~~~~Gl~~~~~~~~~~~~~~ 203 (262)
T 2rcy_A 132 NVNSTDKKYVNDIFNSCGI--IHEI---KE---KDMDIATAISGCGPAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIK 203 (262)
T ss_dssp TCCHHHHHHHHHHHHTSEE--EEEC---CG---GGHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCC--EEEe---CH---HHccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 6788999999999999994 3322 22 456666888887777 6788888899999999999999999887
Q ss_pred HHHHHHHHHhcH--HHHHhcccCch
Q 014863 344 GIISKIISTQGM--LAVYNSFSGED 366 (417)
Q Consensus 344 ~~~~~li~e~G~--~~l~~~vs~~~ 366 (417)
++.++..+++. ..++|.+++|.
T Consensus 204 -~~~~~~~~~~~~~~~l~d~~~~~~ 227 (262)
T 2rcy_A 204 -GSVEMVKKSDQPVQQLKDNIVSPG 227 (262)
T ss_dssp -HHHHHHHHCSSCHHHHHHHHCCTT
T ss_pred -HHHHHHHhcCCCHHHHHHhcCCCC
Confidence 88888876444 55667677663
No 8
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.88 E-value=1e-21 Score=186.03 Aligned_cols=217 Identities=12% Similarity=0.162 Sum_probs=171.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-ceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a 190 (417)
|||+|||+|+||.+++.+|.+. | ++|.+++|+.++..+.+...|+.. ..+..+++ ++|+||+++|+..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~r~~~~~~~~~~~~g~~~----~~~~~~~~-~~D~vi~~v~~~~ 69 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ------GGYRIYIANRGAEKRERLEKELGVET----SATLPELH-SDDVLILAVKPQD 69 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCEEEEECSSHHHHHHHHHHTCCEE----ESSCCCCC-TTSEEEECSCHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC------CCCeEEEECCCHHHHHHHHHhcCCEE----eCCHHHHh-cCCEEEEEeCchh
Confidence 5899999999999999999999 9 888877766444333333458774 45677888 9999999999888
Q ss_pred HHHHHHHHHhcCCCCcEEEEe-ccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeecCCC
Q 014863 191 QADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (417)
Q Consensus 191 ~~~Vl~eI~p~Lk~GaiL~~a-~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~ 269 (417)
..++++++.+ + +++|++. .|+....+.+ .++.+.++++.+|+.|... +.|... +.+..+.
T Consensus 70 ~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~---~~~~~~~~v~~~~~~~~~~------------~~g~~~-i~~~~~~ 130 (263)
T 1yqg_A 70 MEAACKNIRT--N-GALVLSVAAGLSVGTLSR---YLGGTRRIVRVMPNTPGKI------------GLGVSG-MYAEAEV 130 (263)
T ss_dssp HHHHHTTCCC--T-TCEEEECCTTCCHHHHHH---HTTSCCCEEEEECCGGGGG------------TCEEEE-EECCTTS
T ss_pred HHHHHHHhcc--C-CCEEEEecCCCCHHHHHH---HcCCCCcEEEEcCCHHHHH------------cCceEE-EEcCCCC
Confidence 8888887766 5 8887766 7887765654 4455678999999988776 356765 4556666
Q ss_pred CHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 014863 270 DGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECITGI 345 (417)
Q Consensus 270 sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a----~iea~~~~~v~~Gl~~e~A~~~~~~~l~~~ 345 (417)
+.+..+.+..++..+|.. + .. . ..|.++..+++.|+.|+ +++++.+.+++.|++++.++..+.+++. +
T Consensus 131 ~~~~~~~~~~l~~~~g~~-~-~~---~--~~~~~~~~~al~g~~~~~~~~~~~~l~e~~~~~G~~~~~~~~~~~~~~~-~ 202 (263)
T 1yqg_A 131 SETDRRIADRIMKSVGLT-V-WL---D--DEEKMHGITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFK-G 202 (263)
T ss_dssp CHHHHHHHHHHHHTTEEE-E-EC---S--STTHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHhCCCE-E-Ee---C--ChhhccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-H
Confidence 888999999999999953 1 11 2 12567788899888887 5777888999999999999999999988 9
Q ss_pred HHHHHHHhc--HHHHHhcccCch
Q 014863 346 ISKIISTQG--MLAVYNSFSGED 366 (417)
Q Consensus 346 ~~~li~e~G--~~~l~~~vs~~~ 366 (417)
..+++.++| ...+++.+++|.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~ 225 (263)
T 1yqg_A 203 AVALAEQTGEDFEKLQKNVTSKG 225 (263)
T ss_dssp HHHHHHHHCCCHHHHHHHTCCTT
T ss_pred HHHHHHhcCCCHHHHHHhcCCCC
Confidence 999999999 678899998884
No 9
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.88 E-value=9e-22 Score=186.50 Aligned_cols=217 Identities=16% Similarity=0.146 Sum_probs=169.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a 190 (417)
|+||+|||+|+||.+++.+|.+. |++|.+++++.++..+.+.+.|+.. ..+++++++++|+|++++|+..
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~------g~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~D~Vi~~v~~~~ 72 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT------PHELIISGSSLERSKEIAEQLALPY----AMSHQDLIDQVDLVILGIKPQL 72 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS------SCEEEEECSSHHHHHHHHHHHTCCB----CSSHHHHHHTCSEEEECSCGGG
T ss_pred ccEEEEECCCHHHHHHHHHHHhC------CCeEEEECCCHHHHHHHHHHcCCEe----eCCHHHHHhcCCEEEEEeCcHh
Confidence 57999999999999999999988 8888777665443333444457764 5688899999999999999988
Q ss_pred HHHHHHHHHhcCCCCcEEEEe-ccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeecCCC
Q 014863 191 QADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (417)
Q Consensus 191 ~~~Vl~eI~p~Lk~GaiL~~a-~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~ 269 (417)
+.+++.++ ++|++|+.. .|++...+.+ .++.+.++++.+|+.|... +.|... +.+....
T Consensus 73 ~~~v~~~l----~~~~~vv~~~~~~~~~~l~~---~~~~~~~~v~~~p~~~~~~------------~~g~~~-i~~~~~~ 132 (259)
T 2ahr_A 73 FETVLKPL----HFKQPIISMAAGISLQRLAT---FVGQDLPLLRIMPNMNAQI------------LQSSTA-LTGNALV 132 (259)
T ss_dssp HHHHHTTS----CCCSCEEECCTTCCHHHHHH---HHCTTSCEEEEECCGGGGG------------TCEEEE-EEECTTC
T ss_pred HHHHHHHh----ccCCEEEEeCCCCCHHHHHH---hcCCCCCEEEEcCCchHHH------------cCceEE-EEcCCCC
Confidence 87777654 478777655 6787665554 3345568999999988776 356554 5566667
Q ss_pred CHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 014863 270 DGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRRFTENGMNEDLAYKNTVECITGI 345 (417)
Q Consensus 270 sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a----~iea~~~~~v~~Gl~~e~A~~~~~~~l~~~ 345 (417)
+.+..+.+..++..+|. ++.. .+ +.++..+.|+|+.|+ +++++.+.+++.|+++++++..+.+++. +
T Consensus 133 ~~~~~~~~~~ll~~~G~--~~~~---~~---~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~~~~~~-~ 203 (259)
T 2ahr_A 133 SQELQARVRDLTDSFGS--TFDI---SE---KDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVL-A 203 (259)
T ss_dssp CHHHHHHHHHHHHTTEE--EEEC---CG---GGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHhCCC--EEEe---cH---HHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-H
Confidence 88999999999999993 3333 22 346667888888777 6788999999999999999999999998 9
Q ss_pred HHHHHHHhc--HHHHHhcccCch
Q 014863 346 ISKIISTQG--MLAVYNSFSGED 366 (417)
Q Consensus 346 ~~~li~e~G--~~~l~~~vs~~~ 366 (417)
..+++.++| ...+++.+++|.
T Consensus 204 ~~~~~~~~~~~p~~l~~~~~~p~ 226 (259)
T 2ahr_A 204 SASNLKTSSQSPHDFIDAICSPG 226 (259)
T ss_dssp HHHHHHHSSSCHHHHHHHHCCTT
T ss_pred HHHHHHhcCCCHHHHHHhCCCCC
Confidence 999999888 577779888875
No 10
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.85 E-value=4e-20 Score=178.37 Aligned_cols=211 Identities=14% Similarity=0.087 Sum_probs=153.9
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch
Q 014863 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 111 ~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~ 189 (417)
|+||+|||+ |+||.+++++|.+. |++|++++|+ .+..+.+.+.|+. ..+..++++++|+||+++|++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~------g~~V~~~~r~-~~~~~~~~~~g~~-----~~~~~~~~~~aDvVi~av~~~ 78 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS------AHHLAAIEIA-PEGRDRLQGMGIP-----LTDGDGWIDEADVVVLALPDN 78 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS------SSEEEEECCS-HHHHHHHHHTTCC-----CCCSSGGGGTCSEEEECSCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHhcCCC-----cCCHHHHhcCCCEEEEcCCch
Confidence 479999999 99999999999999 9998876665 4444555557755 346778899999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEEe-ccchhhhhhccccCCCCCCcEEEeccCCchhhH----HHHHhhcccccCCC------
Q 014863 190 AQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV----RRLYVQGKEINGAG------ 258 (417)
Q Consensus 190 a~~~Vl~eI~p~Lk~GaiL~~a-~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~v----r~ly~~G~e~~G~G------ 258 (417)
...++++++.++++++++|++. .|..+..+.+ . .++.+|++.||+.|+... ... +.|
T Consensus 79 ~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~---~-~~~~~~v~~~P~~~~~~~~~~~~~~--------~~g~l~~~~ 146 (286)
T 3c24_A 79 IIEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP---E-RADITYFIGHPCHPPLFNDETDPAA--------RTDYHGGIA 146 (286)
T ss_dssp HHHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC---C-CTTSEEEEEEECCSCSSCCCCSHHH--------HTCSSSSSS
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCchhHHHHh---h-hCCCeEEecCCCCccccccccchhh--------ccCcccccc
Confidence 9999999999999999987754 4555554432 2 346789999999987610 001 245
Q ss_pred -ceEEEeecCCCCHHHHHHHHHHHHHhCCC--cccccchhhhhhhhccccccccc-chH----HHHHHHHHHHHHHcCCC
Q 014863 259 -INSSFAVHQDVDGRATNVALGWSVALGSP--FTFATTLEQEYRSDIFGERGILL-GAV----HGIVESLFRRFTENGMN 330 (417)
Q Consensus 259 -v~~liav~qd~sgea~e~a~al~~aiG~~--~~iett~~~E~~~dlfgeqtvL~-G~~----~a~iea~~~~~v~~Gl~ 330 (417)
.+.+++.. ..+.+..+.+..++..+|.+ +++... +...|.+. ..++ |+. -+++|++.+.+++.|++
T Consensus 147 ~~~~i~~~~-~~~~~~~~~v~~l~~~~G~~~~~~~~v~---~~~~~~~~--~a~~n~~~~~~~~~~~eal~~~~~~~Gl~ 220 (286)
T 3c24_A 147 KQAIVCALM-QGPEEHYAIGADICETMWSPVTRTHRVT---TEQLAILE--PGLSEMVAMPFVETMVHAVDECADRYGID 220 (286)
T ss_dssp CEEEEEEEE-ESCTHHHHHHHHHHHHHTCSEEEEEECC---HHHHHHHT--THHHHTTHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cceeeeecc-CCCHHHHHHHHHHHHHhcCCcceEEEeC---hhHhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34433323 35778999999999999973 334332 33344442 2232 233 33788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 014863 331 EDLAYKNTVECITGIISKIIST 352 (417)
Q Consensus 331 ~e~A~~~~~~~l~~~~~~li~e 352 (417)
+++++.++.+++. ++++++.+
T Consensus 221 ~~~~~~~~~~~~~-~~~~~~~~ 241 (286)
T 3c24_A 221 RQAALDFMIGHLN-VEIAMWFG 241 (286)
T ss_dssp HHHHHHHHHHHHH-HHHHHHTT
T ss_pred HHHHHHHHHHHHH-HHHHHHHh
Confidence 9999999999988 77777755
No 11
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.84 E-value=7.9e-21 Score=182.07 Aligned_cols=260 Identities=12% Similarity=0.046 Sum_probs=180.6
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc-cCCeEEEeec
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLIS 187 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~-~ADiViLavp 187 (417)
|+||+|||+|+||.++|++|++. |+ +|+++++. .+..+.+.+.|+.. ....+++++++ ++|+|++++|
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~------g~~~~V~~~d~~-~~~~~~~~~~g~~~--~~~~~~~~~~~~~aDvVilavp 71 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDIN-PESISKAVDLGIID--EGTTSIAKVEDFSPDFVMLSSP 71 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECSC-HHHHHHHHHTTSCS--EEESCGGGGGGTCCSEEEECSC
T ss_pred CcEEEEEecCHHHHHHHHHHHhc------CCCcEEEEEeCC-HHHHHHHHHCCCcc--cccCCHHHHhcCCCCEEEEcCC
Confidence 58999999999999999999998 87 77765554 44566677778741 11357788899 9999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchh---hhhhccccCCCCCCcEEEeccCC------chhhHHHHHhhcccccCCC
Q 014863 188 DAAQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKG------MGPSVRRLYVQGKEINGAG 258 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i---~~~~~~~i~~~~di~VI~v~Pn~------pg~~vr~ly~~G~e~~G~G 258 (417)
++...++++++.++++++++|+++++.+. ..+.+ .+++ .++..||.. |+... ...+.|
T Consensus 72 ~~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~---~l~~--~~v~~~p~~~~~~~gp~~a~--------~~l~~g 138 (281)
T 2g5c_A 72 VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN---ILGK--RFVGGHPIAGTEKSGVEYSL--------DNLYEG 138 (281)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH---HHGG--GEECEEEECCCSCCSGGGCC--------SSTTTT
T ss_pred HHHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHH---hccc--cceeeccccCCccCChhhhh--------hHHhCC
Confidence 99999999999999999999998877653 22332 2232 266666632 22221 112357
Q ss_pred ceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHH-HHHHHHHHHHcCCCHHHHHHH
Q 014863 259 INSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGI-VESLFRRFTENGMNEDLAYKN 337 (417)
Q Consensus 259 v~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~-iea~~~~~v~~Gl~~e~A~~~ 337 (417)
.+++++++...+.+..+.+..++..+|.. ++.++ + ...++.+.++|.+|++ .-++.+.+.+.|++++.++.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~v~~l~~~~g~~-~~~~~---~---~~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l 211 (281)
T 2g5c_A 139 KKVILTPTKKTDKKRLKLVKRVWEDVGGV-VEYMS---P---ELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKY 211 (281)
T ss_dssp CEEEECCCSSSCHHHHHHHHHHHHHTTCE-EEECC---H---HHHHHHHHHHTHHHHHHHHHHHHHHHHHCBTTBCGGGC
T ss_pred CCEEEecCCCCCHHHHHHHHHHHHHcCCE-EEEcC---H---HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhh
Confidence 88889988888899999999999999973 33332 1 1224568889999996 467788888889999999999
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHhcccCchhhhhhhhhhccChhHHHHHHHHHHhhhcchh--HHHHHHcCC
Q 014863 338 TVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYECYEDVAAGSE--IRSVVLAGR 406 (417)
Q Consensus 338 ~~~~l~~~~~~li~e~G~~~l~~~vs~~~~~~~~~~~~~~~~~~~~~m~~~~~~v~~g~~--~~~~~~~~~ 406 (417)
+.+++. +++++.. .-...+++.+++|...-... -....+.|.++-+.|++|++ .++++.+.+
T Consensus 212 ~~~~~~-~~~r~~~-~~p~~~~~~~~sn~~~~~~~-----l~~~~~~l~~~~~~i~~~d~~~l~~~~~~~~ 275 (281)
T 2g5c_A 212 PGGGFK-DFTRIAK-SDPIMWRDIFLENKENVMKA-----IEGFEKSLNHLKELIVREAEEELVEYLKEVK 275 (281)
T ss_dssp CTTTGG-GC---CC-SCHHHHHHHHHHTHHHHHHH-----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccccHH-HHhHHhc-CCHHHHHHHHHHCHHHHHHH-----HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 999888 7777764 44566777777665321111 12233445556666666664 466665543
No 12
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.84 E-value=1.6e-20 Score=180.61 Aligned_cols=231 Identities=12% Similarity=0.057 Sum_probs=166.3
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a 190 (417)
++||+|||+|+||.++|++|.+. |.|++|+++++. ....+.+.+.|... ....+++++++++|+||+++|++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~----g~~~~V~~~d~~-~~~~~~~~~~g~~~--~~~~~~~~~~~~aDvVilavp~~~ 78 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD----HPHYKIVGYNRS-DRSRDIALERGIVD--EATADFKVFAALADVIILAVPIKK 78 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSS-HHHHHHHHHTTSCS--EEESCTTTTGGGCSEEEECSCHHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhC----CCCcEEEEEcCC-HHHHHHHHHcCCcc--cccCCHHHhhcCCCEEEEcCCHHH
Confidence 48999999999999999999887 123577665554 44456666677631 014577788999999999999999
Q ss_pred HHHHHHHHHhc-CCCCcEEEEeccchh---hhhhccccCCCC-CCcEEEeccC------CchhhHHHHHhhcccccCCCc
Q 014863 191 QADNYEKIFSC-MKPNSILGLSHGFLL---GHLQSMGLDFPK-NIGVIAVCPK------GMGPSVRRLYVQGKEINGAGI 259 (417)
Q Consensus 191 ~~~Vl~eI~p~-Lk~GaiL~~a~G~~i---~~~~~~~i~~~~-di~VI~v~Pn------~pg~~vr~ly~~G~e~~G~Gv 259 (417)
+.++++++.++ ++++++|+++++.+. ..+.+ .+++ .++++..||. +|+....++ ..|.
T Consensus 79 ~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~---~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l--------~~g~ 147 (290)
T 3b1f_A 79 TIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEY---YLKDKPVQFVGSHPMAGSHKSGAVAANVNL--------FENA 147 (290)
T ss_dssp HHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHH---HHTTSSCEEEEEEEC-----CCTTSCCTTT--------TTTS
T ss_pred HHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHH---hccccCCEEEEeCCcCCCCcchHHHhhHHH--------hCCC
Confidence 99999999999 999999988877654 33333 3333 6788888886 554432222 2467
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 014863 260 NSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTV 339 (417)
Q Consensus 260 ~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~ 339 (417)
+.+++++...+.+..+.+..++..+|.. ++.++.+++ |.. .+.++|+.|.+.-++.+.+...|++++.++.++.
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~l~~~~G~~-~~~~~~~~~---d~~--~a~~s~~~~~~a~~~~~~~~~~g~~~~~~~~la~ 221 (290)
T 3b1f_A 148 YYIFSPSCLTKPNTIPALQDLLSGLHAR-YVEIDAAEH---DCV--TSQISHFPHIIASSLMKQAGDFSESHEMTKHFAA 221 (290)
T ss_dssp EEEEEECTTCCTTHHHHHHHHTGGGCCE-EEECCHHHH---HHH--HHHHTHHHHHHHHHHHHHHHHHHHHCTHHHHHCC
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCE-EEEcCHHHH---HHH--HHHHhhHHHHHHHHHHHHHHhcccchhhHHhhcc
Confidence 7778888878889999999999999963 333332222 321 2556777777655566666667888899999999
Q ss_pred HHHHHHHHHHHHHhcHHHHHhcccCchh
Q 014863 340 ECITGIISKIISTQGMLAVYNSFSGEDK 367 (417)
Q Consensus 340 ~~l~~~~~~li~e~G~~~l~~~vs~~~~ 367 (417)
+++. +++++. ..-...++|.+++|..
T Consensus 222 ~~~~-~~~rla-~~~p~~~~~~~~~n~~ 247 (290)
T 3b1f_A 222 GGFR-DMTRIA-ESEPGMWTSILLTNQE 247 (290)
T ss_dssp HHHH-HTTGGG-GSCHHHHHHHHHHSHH
T ss_pred ccHH-hhhhhh-cCCHHHHHHHHHHCHH
Confidence 9998 777777 3344666888877653
No 13
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.82 E-value=3.1e-20 Score=183.46 Aligned_cols=209 Identities=13% Similarity=0.027 Sum_probs=153.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHHcCceecCCCcCCHHh-hhccCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE-TISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~E-av~~ADiViLavpd 188 (417)
+||+|||+|+||.++|++|++. |+ +|+++++. ....+.+.+.|+.. ....++++ ++++||+||+|+|+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~------G~~~~V~~~dr~-~~~~~~a~~~G~~~--~~~~~~~~~~~~~aDvVilavp~ 104 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDIN-PESISKAVDLGIID--EGTTSIAKVEDFSPDFVMLSSPV 104 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECSC-HHHHHHHHHTTSCS--EEESCTTGGGGGCCSEEEECSCG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC------CCCCEEEEEECC-HHHHHHHHHCCCcc--hhcCCHHHHhhccCCEEEEeCCH
Confidence 8999999999999999999999 98 77665554 55677788888741 12457788 89999999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccch---hhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEee
Q 014863 189 AAQADNYEKIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~~a~G~~---i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav 265 (417)
....++++++.++++++++|+++++++ +..+.+ .+|. ++|..||...... ..+...+.....|..+++++
T Consensus 105 ~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~---~l~~--~~v~~hPm~G~e~--sG~~~A~~~Lf~g~~~il~~ 177 (314)
T 3ggo_A 105 RTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN---ILGK--RFVGGHPIAGTEK--SGVEYSLDNLYEGKKVILTP 177 (314)
T ss_dssp GGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH---HHGG--GEECEEECCCCCC--CSGGGCCTTTTTTCEEEECC
T ss_pred HHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHH---hcCC--CEEecCcccCCcc--cchhhhhhhhhcCCEEEEEe
Confidence 999999999999999999999998875 333333 2233 8999999553211 00001111223567888998
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHH
Q 014863 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIV-ESLFRRFTENGMNEDLAYKNTVECIT 343 (417)
Q Consensus 266 ~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~i-ea~~~~~v~~Gl~~e~A~~~~~~~l~ 343 (417)
++..+.++.+.++.++..+|. +++..+.+++ | ..+.+.+.+|.++ -++.+.+.+.+.+.+++..++.....
T Consensus 178 ~~~~~~~~~~~v~~l~~~~G~-~v~~~~~~~h---D---~~~a~~s~lph~~a~~l~~~~~~~~~~~~~~~~~a~~~fr 249 (314)
T 3ggo_A 178 TKKTDKKRLKLVKRVWEDVGG-VVEYMSPELH---D---YVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGGGFK 249 (314)
T ss_dssp CTTSCHHHHHHHHHHHHHTTC-EEEECCHHHH---H---HHHHHHTHHHHHHHHHHHHHHHHHCCSSCCGGGCCTTTTT
T ss_pred CCCCCHHHHHHHHHHHHHcCC-EEEEcCHHHH---H---HHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHhhccccHH
Confidence 888899999999999999996 4454544444 3 4466777888855 56677777888777777766655444
No 14
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.79 E-value=2.3e-18 Score=167.98 Aligned_cols=208 Identities=13% Similarity=0.077 Sum_probs=152.1
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a 190 (417)
+||+||| +|+||.++|++|++. |++|++.++... .+..+++++||+||++||++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~------G~~V~~~~~~~~------------------~~~~~~~~~aDvVilavp~~~ 77 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS------GYPISILDREDW------------------AVAESILANADVVIVSVPINL 77 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT------TCCEEEECTTCG------------------GGHHHHHTTCSEEEECSCGGG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC------CCeEEEEECCcc------------------cCHHHHhcCCCEEEEeCCHHH
Confidence 7999999 999999999999999 998887765422 135678899999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeecCCCC
Q 014863 191 QADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD 270 (417)
Q Consensus 191 ~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~s 270 (417)
..++++++.++++++++|++++|++...++...-..+ .+++..||.. ++.. . ...|.+++++++. +
T Consensus 78 ~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~--~~~v~~hP~~-g~~~-----~----~~~g~~~~l~~~~--~ 143 (298)
T 2pv7_A 78 TLETIERLKPYLTENMLLADLTSVKREPLAKMLEVHT--GAVLGLHPMF-GADI-----A----SMAKQVVVRCDGR--F 143 (298)
T ss_dssp HHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHCS--SEEEEEEECS-CTTC-----S----CCTTCEEEEEEEE--C
T ss_pred HHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhcC--CCEEeeCCCC-CCCc-----h----hhcCCeEEEecCC--C
Confidence 9999999999999999999998886432221000222 5788888842 2210 0 1245677777765 6
Q ss_pred HHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHH----
Q 014863 271 GRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIV-ESLFRRFTENGMNEDLAYKNTVECITGI---- 345 (417)
Q Consensus 271 gea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~i-ea~~~~~v~~Gl~~e~A~~~~~~~l~~~---- 345 (417)
.+..+.+..++..+|.. ++.++.+ ..+..+.+++.+|+++ -++.+.+.+.|++++++++++.+.+. +
T Consensus 144 ~~~~~~v~~l~~~~G~~-~~~~~~~------~~d~~~a~~~~~p~~~a~~l~~~l~~~g~~~~~~~~la~~~f~-~~~~~ 215 (298)
T 2pv7_A 144 PERYEWLLEQIQIWGAK-IYQTNAT------EHDHNMTYIQALRHFSTFANGLHLSKQPINLANLLALSSPIYR-LELAM 215 (298)
T ss_dssp GGGTHHHHHHHHHTTCE-EEECCHH------HHHHHHHHHTHHHHHHHHHHHHHHTTSSCCHHHHHHTCCHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHcCCE-EEECCHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcCHHHH-HHHHH
Confidence 78889999999999973 3333222 2245578899999864 56667777899999999999999998 6
Q ss_pred HHHHHHHhcHHHHHhcccCch
Q 014863 346 ISKIISTQGMLAVYNSFSGED 366 (417)
Q Consensus 346 ~~~li~e~G~~~l~~~vs~~~ 366 (417)
++++. ..-...++|.+++|.
T Consensus 216 ~~ria-~~~p~~~~di~~sn~ 235 (298)
T 2pv7_A 216 IGRLF-AQDAELYADIIMDKS 235 (298)
T ss_dssp HHHHH-TSCHHHHHHHHC---
T ss_pred HHHHh-cCCHHHHHHHHHHCH
Confidence 55554 334567788887664
No 15
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.79 E-value=1.9e-18 Score=173.26 Aligned_cols=204 Identities=12% Similarity=0.080 Sum_probs=147.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhcc----CCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG----SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~----ADiViLavp 187 (417)
+||+|||+|+||.++|++|++. |++|++++++ ....+.+.+.|+.. ..++++++++ +|+||+++|
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~------G~~V~~~dr~-~~~~~~a~~~G~~~----~~~~~e~~~~a~~~aDlVilavP 77 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA------NHSVFGYNRS-RSGAKSAVDEGFDV----SADLEATLQRAAAEDALIVLAVP 77 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSC-HHHHHHHHHTTCCE----ESCHHHHHHHHHHTTCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCee----eCCHHHHHHhcccCCCEEEEeCC
Confidence 7899999999999999999999 9988766654 55677888889864 4677777764 799999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchhh---hhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEe
Q 014863 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~lia 264 (417)
+....++++++.++ ++|++|+++++++.. .+.. .++ +.++|..||...... ..+..+......|.+++++
T Consensus 78 ~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~---~~~-~~~~v~~HPmaG~e~--sG~~aa~~~Lf~g~~~ilt 150 (341)
T 3ktd_A 78 MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKA---RNM-QHRYVGSHPMAGTAN--SGWSASMDGLFKRAVWVVT 150 (341)
T ss_dssp HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHH---TTC-GGGEECEEECCSCC---CCGGGCCSSTTTTCEEEEC
T ss_pred HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHH---hCC-CCcEecCCccccccc--cchhhhhhHHhcCCeEEEE
Confidence 99889999999986 899999999988643 3332 333 578999999442110 1122233334467888999
Q ss_pred ecCCCCHH--------HHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHH-HHHHHHHcCCCHHHHH
Q 014863 265 VHQDVDGR--------ATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVES-LFRRFTENGMNEDLAY 335 (417)
Q Consensus 265 v~qd~sge--------a~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea-~~~~~v~~Gl~~e~A~ 335 (417)
++...+.+ +++.++.++..+|. +++..+.++| +..+.+.+.+|.++-. +.+.+.+ .++.+.
T Consensus 151 p~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga-~v~~~~~~~H------D~~~A~vshlPh~ia~aL~~~~~~---~~~~~~ 220 (341)
T 3ktd_A 151 FDQLFDGTDINSTWISIWKDVVQMALAVGA-EVVPSRVGPH------DAAAARVSHLTHILAETLAIVGDN---GGALSL 220 (341)
T ss_dssp CGGGTSSCCCCHHHHHHHHHHHHHHHHTTC-EEEECCHHHH------HHHHHHHTHHHHHHHHHHHHHHHH---THHHHH
T ss_pred eCCCCChhhhccchHHHHHHHHHHHHHcCC-EEEEeCHHHH------HHHHHHHhHHHHHHHHHHHHHhhc---chHHHH
Confidence 98877777 89999999999996 4555544444 3447788888885444 4444322 245555
Q ss_pred HHHHHHHH
Q 014863 336 KNTVECIT 343 (417)
Q Consensus 336 ~~~~~~l~ 343 (417)
.++.....
T Consensus 221 ~laa~gfr 228 (341)
T 3ktd_A 221 SLAAGSYR 228 (341)
T ss_dssp HHCCHHHH
T ss_pred HHccccHH
Confidence 55555444
No 16
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.78 E-value=7.9e-18 Score=160.79 Aligned_cols=225 Identities=12% Similarity=0.056 Sum_probs=163.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchhH
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a~ 191 (417)
|||+|||+|+||.+++++|.+. |++|+++++. .+..+.+.+.|... ....+++++ +++|+||+++|++..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~--~~~~~~~~~-~~~D~vi~av~~~~~ 70 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR------GHYLIGVSRQ-QSTCEKAVERQLVD--EAGQDLSLL-QTAKIIFLCTPIQLI 70 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTSCS--EEESCGGGG-TTCSEEEECSCHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHHhCCCCc--cccCCHHHh-CCCCEEEEECCHHHH
Confidence 5899999999999999999998 9988776554 44455566777641 114577788 999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCCCCCcEEEeccCC------chhhHHHHHhhcccccCCCceEEEee
Q 014863 192 ADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKG------MGPSVRRLYVQGKEINGAGINSSFAV 265 (417)
Q Consensus 192 ~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~------pg~~vr~ly~~G~e~~G~Gv~~liav 265 (417)
.++++++.++++++++|+++++++...++...-.++ +++..||-. |.... .....|.++.+++
T Consensus 71 ~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~---~~~~~~p~~g~~~~gp~~a~--------~~~~~g~~~~~~~ 139 (279)
T 2f1k_A 71 LPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLWS---GFIGGHPMAGTAAQGIDGAE--------ENLFVNAPYVLTP 139 (279)
T ss_dssp HHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHST---TCEEEEECCCCSCSSGGGCC--------TTTTTTCEEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHhC---CEeecCcccCCccCCHHHHh--------HHHhCCCcEEEec
Confidence 999999999999999988887766432221000222 567777742 22221 1112455677887
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH-HHHHHHHHHHHcCCC--HHHHHHHHHHHH
Q 014863 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-IVESLFRRFTENGMN--EDLAYKNTVECI 342 (417)
Q Consensus 266 ~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a-~iea~~~~~v~~Gl~--~e~A~~~~~~~l 342 (417)
....+.+..+.+..++..+|.. ++.. .+ +..++.+.+++.+|. +.-++.+.+++.|++ ++.++.++.+.+
T Consensus 140 ~~~~~~~~~~~v~~l~~~~g~~-~~~~---~~---~~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~~~ 212 (279)
T 2f1k_A 140 TEYTDPEQLACLRSVLEPLGVK-IYLC---TP---ADHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASSGF 212 (279)
T ss_dssp CTTCCHHHHHHHHHHHGGGTCE-EEEC---CH---HHHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCE-EEEc---CH---HHHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCCcc
Confidence 7777889999999999999963 2222 22 234566788888877 566788899999998 899999999999
Q ss_pred HHHHHHHHHHhcHHHHHhcccCch
Q 014863 343 TGIISKIISTQGMLAVYNSFSGED 366 (417)
Q Consensus 343 ~~~~~~li~e~G~~~l~~~vs~~~ 366 (417)
. +++++. ..-...++|.|++|.
T Consensus 213 ~-~~~r~~-~~~p~~~~~~~~s~~ 234 (279)
T 2f1k_A 213 R-DTSRVG-GGNPELGTMMATYNQ 234 (279)
T ss_dssp H-HHHTGG-GSCHHHHHHHHHHSH
T ss_pred c-chhccc-CCCHHHHHHHHHHhH
Confidence 8 777776 344577888888774
No 17
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.66 E-value=6.8e-17 Score=155.54 Aligned_cols=213 Identities=11% Similarity=0.028 Sum_probs=135.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEE-EEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a 190 (417)
+||+|||+|+||.+++++|.+. ++|+ +++++..+..+.+...|. . ..+++++++++|+||+++|++.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-------~~v~~v~~~~~~~~~~~~~~~g~-~----~~~~~~~~~~~DvVilav~~~~ 70 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-------YEIGYILSRSIDRARNLAEVYGG-K----AATLEKHPELNGVVFVIVPDRY 70 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----------CCCEECSSHHHHHHHHHHTCC-C----CCSSCCCCC---CEEECSCTTT
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-------CcEEEEEeCCHHHHHHHHHHcCC-c----cCCHHHHHhcCCEEEEeCChHH
Confidence 6899999999999999998643 3453 555553333333345565 3 4577788899999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEec-cchhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeecCCC
Q 014863 191 QADNYEKIFSCMKPNSILGLSH-GFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (417)
Q Consensus 191 ~~~Vl~eI~p~Lk~GaiL~~a~-G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~ 269 (417)
+.++++++. +++++|+.++ ++....++. ........+..+|++|.... .+ .+++..++.
T Consensus 71 ~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~---~~~~~~~p~~~~~g~~~~~~--~~--------~~~~~~~~~---- 130 (276)
T 2i76_A 71 IKTVANHLN---LGDAVLVHCSGFLSSEIFKK---SGRASIHPNFSFSSLEKALE--MK--------DQIVFGLEG---- 130 (276)
T ss_dssp HHHHHTTTC---CSSCCEEECCSSSCGGGGCS---SSEEEEEECSCC--CTTGGG--CG--------GGCCEEECC----
T ss_pred HHHHHHHhc---cCCCEEEECCCCCcHHHHHH---hhccccchhhhcCCCchhHH--Hh--------CCCeEEEEe----
Confidence 888887765 6788777555 555554432 11000111223455454331 01 346554443
Q ss_pred CHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q 014863 270 DGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-IVESLFRRFTENGMNEDLAYKNTVECITGIISK 348 (417)
Q Consensus 270 sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a-~iea~~~~~v~~Gl~~e~A~~~~~~~l~~~~~~ 348 (417)
+.+..+.++.++..+|.. ++.. .+...+.++..+++++..+. ++..+.+.+++.|+++++|+ ..+.+. +.++
T Consensus 131 ~~~~~~~~~~l~~~lG~~-~~~v---~~~~~~~~~~~~~l~~n~~~~~~~~a~~~~~~~Gl~~~~a~--~~~l~~-~~~~ 203 (276)
T 2i76_A 131 DERGLPIVKKIAEEISGK-YFVI---PSEKKKAYHLAAVIASNFPVALAYLSKRIYTLLGLDEPELL--IHTLMK-GVAD 203 (276)
T ss_dssp CTTTHHHHHHHHHHHCSC-EEEC---CGGGHHHHHHHHHHHHTTHHHHHHHHHHHHHTTTCSCHHHH--HHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHhCCC-EEEE---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH--HHHHHH-HHHH
Confidence 345688899999999963 3333 22233456666777777666 44445577888999999997 777787 8999
Q ss_pred HHHHhcHHHHHhcccCch
Q 014863 349 IISTQGMLAVYNSFSGED 366 (417)
Q Consensus 349 li~e~G~~~l~~~vs~~~ 366 (417)
++.+.| -++.+++|.
T Consensus 204 ~~~~~g---p~~~~tgP~ 218 (276)
T 2i76_A 204 NIKKMR---VECSLTGPV 218 (276)
T ss_dssp HHHHSC---GGGGCCSHH
T ss_pred HHHhcC---hHhhCCCCc
Confidence 999999 388899885
No 18
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.65 E-value=4.1e-15 Score=141.17 Aligned_cols=210 Identities=12% Similarity=0.097 Sum_probs=139.4
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCce-EEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEee
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~-Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLav 186 (417)
+.+ +||+|||+|.||.+++++|.+. |++ |.++++..++..+.+...|+.. ..+++++++++|+|++++
T Consensus 8 ~~~-m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~Dvvi~av 76 (266)
T 3d1l_A 8 IED-TPIVLIGAGNLATNLAKALYRK------GFRIVQVYSRTEESARELAQKVEAEY----TTDLAEVNPYAKLYIVSL 76 (266)
T ss_dssp GGG-CCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSHHHHHHHHHHTTCEE----ESCGGGSCSCCSEEEECC
T ss_pred CCC-CeEEEEcCCHHHHHHHHHHHHC------CCeEEEEEeCCHHHHHHHHHHcCCce----eCCHHHHhcCCCEEEEec
Confidence 445 7899999999999999999998 987 6666655333333334447764 567888899999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEe-ccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEee
Q 014863 187 SDAAQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL~~a-~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav 265 (417)
|+..+.++++++.+.+++|++|++. .|+....+.+ .++. .-..||-.|-... ......+.+.++
T Consensus 77 ~~~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~---~~~~---~~~~~~~~~~~g~-------~~~~~~~~~~~v-- 141 (266)
T 3d1l_A 77 KDSAFAELLQGIVEGKREEALMVHTAGSIPMNVWEG---HVPH---YGVFYPMQTFSKQ-------REVDFKEIPFFI-- 141 (266)
T ss_dssp CHHHHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTT---TCSS---EEEEEECCCC----------CCCCCTTCCEEE--
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEECCCCCchHHHHH---HHHh---ccCcCCceecCCC-------chhhcCCCeEEE--
Confidence 9999889999999999999987755 4565544432 2222 1124554441110 000123455544
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHH
Q 014863 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRR-FTENGMNEDLAYKNTVECITG 344 (417)
Q Consensus 266 ~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~~-~v~~Gl~~e~A~~~~~~~l~~ 344 (417)
...+.+..+.+..++..+|.. ++.. .+.....++..+.+++..++.+-++.+. +.+.|+++++++.++.+++.
T Consensus 142 -~~~~~~~~~~~~~l~~~~g~~-~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~eal~~~~Gl~~~~~~~l~~~~~~- 215 (266)
T 3d1l_A 142 -EASSTEDAAFLKAIASTLSNR-VYDA---DSEQRKSLHLAAVFTCNFTNHMYALAAELLKKYNLPFDVMLPLIDETAR- 215 (266)
T ss_dssp -EESSHHHHHHHHHHHHTTCSC-EEEC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGGHHHHHHHHH-
T ss_pred -ecCCHHHHHHHHHHHHhcCCc-EEEe---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-
Confidence 233678899999999999963 2222 1211124667777887777633333333 35899999999998888877
Q ss_pred HHHHH
Q 014863 345 IISKI 349 (417)
Q Consensus 345 ~~~~l 349 (417)
++.++
T Consensus 216 ~~~~~ 220 (266)
T 3d1l_A 216 KVHEL 220 (266)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 55543
No 19
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=99.62 E-value=6.6e-17 Score=166.32 Aligned_cols=102 Identities=19% Similarity=0.356 Sum_probs=89.5
Q ss_pred hcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhcccCchhhhhhhhhhccChh
Q 014863 301 DIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYP 380 (417)
Q Consensus 301 dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~~l~~~~~~li~e~G~~~l~~~vs~~~~~~~~~~~~~~~~~ 380 (417)
..|+....+++++.|++|++||++|++||+||.||++|+|+++ +|++||+++|+.+|+++|| ||+|||+|.. +..
T Consensus 353 e~f~~Gilmva~v~a~ve~~FEtlveaGy~pE~AYfE~LHElk-LIvdli~e~gl~~M~~sIS--dTAEYG~yl~--~~~ 427 (491)
T 3ulk_A 353 EYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLHELP-LIANTIARKRLYEMNVVIS--DTAEYGNYLF--SYA 427 (491)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHTTGGGHH-HHHHHHHHHHHHHHHHHSC--HHHHHHHHHH--HHH
T ss_pred cchhhhhHHHHHHHHHHhhhHHHHHHcCCcHHHHHHHHHhHHH-HHHHHHHHhhHHHHHhHhh--hHhhhcCEEe--cHH
Confidence 3455554458889999999999999999999999999999999 9999999999999999999 8999999943 356
Q ss_pred HHHHHHHHHHhhhcchhHHHHHHcCCcc
Q 014863 381 CMEILYECYEDVAAGSEIRSVVLAGRRF 408 (417)
Q Consensus 381 ~~~~m~~~~~~v~~g~~~~~~~~~~~~~ 408 (417)
+++.|++++++||+|.|+|++ .+++..
T Consensus 428 ~k~~mk~~l~~Iq~g~fak~~-~e~~~g 454 (491)
T 3ulk_A 428 CVPLLKPFMAELQPGDLGKAI-PEGAVD 454 (491)
T ss_dssp HHHHTHHHHHTCCTTSSSSCC-CCCCCC
T ss_pred HHHHHHHHHHHccCChHhhhh-hhccCC
Confidence 788999999999999999984 555543
No 20
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.60 E-value=2.7e-14 Score=141.64 Aligned_cols=193 Identities=14% Similarity=0.133 Sum_probs=133.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHH-----------HcCceecC-----------CC
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-----------AAGFTEEN-----------GT 168 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~-----------~~G~~~~d-----------~~ 168 (417)
++||+|||.|+||.++|.+|..+ |++|++++++ ....+.+. +.|... + ..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~------G~~V~l~d~~-~~~~~~~~~~i~~~l~~l~~~G~~~-g~~~~~~~~~~i~~ 77 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIE-PRQITGALENIRKEMKSLQQSGSLK-GSLSAEEQLSLISS 77 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSC-HHHHHHHHHHHHHHHHHHHHTTCCC-SSSCHHHHHHTEEE
T ss_pred CceEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHHHHHHHHHHHHcCccc-cccchHHHhhceEE
Confidence 48999999999999999999999 9998887665 33344432 234221 0 01
Q ss_pred cCCHHhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEEE-EeccchhhhhhccccCCCCCCcEEEeccCCchhhHH
Q 014863 169 LGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVR 245 (417)
Q Consensus 169 ~~~~~Eav~~ADiViLavpd~a~--~~Vl~eI~p~Lk~GaiL~-~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr 245 (417)
..++++++++||+||+++|.... .+++.++.++++++++|+ .++|+.+..+.. .++...+++.+||..|.+..
T Consensus 78 ~~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~---~~~~~~r~ig~Hp~~P~~~~- 153 (319)
T 2dpo_A 78 CTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT---GLAHVKQCIVAHPVNPPYYI- 153 (319)
T ss_dssp ECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT---TCTTGGGEEEEEECSSTTTC-
T ss_pred eCCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHH---hcCCCCCeEEeecCCchhhc-
Confidence 46888999999999999997643 478899999999999875 667887776655 34445689999999987541
Q ss_pred HHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccch-HHHHHHHHHHHH
Q 014863 246 RLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGA-VHGIVESLFRRF 324 (417)
Q Consensus 246 ~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~-~~a~iea~~~~~ 324 (417)
+ ..-++++...+.+..+.+..++..+|...+.-. .+ .. +-++.- ..+++..++..+
T Consensus 154 ------------~-lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~---~~--~~-----Gfi~Nrll~a~~~EA~~l~ 210 (319)
T 2dpo_A 154 ------------P-LVELVPHPETSPATVDRTHALMRKIGQSPVRVL---KE--ID-----GFVLNRLQYAIISEAWRLV 210 (319)
T ss_dssp ------------C-EEEEEECTTCCHHHHHHHHHHHHHTTCEEEECS---SC--CT-----TTTHHHHHHHHHHHHHHHH
T ss_pred ------------c-eEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEEC---CC--cC-----CchHHHHHHHHHHHHHHHH
Confidence 1 234667888899999999999999996422110 11 11 112222 223444455555
Q ss_pred HHcCCCHHHHHHHH
Q 014863 325 TENGMNEDLAYKNT 338 (417)
Q Consensus 325 v~~Gl~~e~A~~~~ 338 (417)
.+.|.++++.....
T Consensus 211 ~~g~~~~~~id~a~ 224 (319)
T 2dpo_A 211 EEGIVSPSDLDLVM 224 (319)
T ss_dssp HTTSSCHHHHHHHH
T ss_pred HhCCCCHHHHHHHH
Confidence 66667998876643
No 21
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.59 E-value=4.2e-15 Score=146.13 Aligned_cols=194 Identities=18% Similarity=0.257 Sum_probs=124.7
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a 190 (417)
|+||||||+|+||.+||+||.+. |++|.+++|+.+ ..+...+.|... +.++.|+++++|+||+|+|+..
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~------G~~v~v~dr~~~-~~~~l~~~Ga~~----a~s~~e~~~~~dvv~~~l~~~~ 71 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLVQS-AVDGLVAAGASA----ARSARDAVQGADVVISMLPASQ 71 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSSHH-HHHHHHHTTCEE----CSSHHHHHTTCSEEEECCSCHH
T ss_pred cCEEEEeeehHHHHHHHHHHHhC------CCeEEEEcCCHH-HHHHHHHcCCEE----cCCHHHHHhcCCceeecCCchH
Confidence 78999999999999999999999 999998887744 456666789886 7899999999999999999887
Q ss_pred HH-HHHHH---HHhcCCCCcEEEEeccchhh---hhhccccCCCCCCcEEEecc-C-CchhhHHHHHhhcccccCCCceE
Q 014863 191 QA-DNYEK---IFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCP-K-GMGPSVRRLYVQGKEINGAGINS 261 (417)
Q Consensus 191 ~~-~Vl~e---I~p~Lk~GaiL~~a~G~~i~---~~~~~~i~~~~di~VI~v~P-n-~pg~~vr~ly~~G~e~~G~Gv~~ 261 (417)
+. +|+.. +.+.+++|++|++.+-.... .+.+ ..-..++.++- +| . +|... +. |--.
T Consensus 72 ~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~--~~~~~G~~~lD-aPVsGg~~~A-----~~-------G~L~ 136 (300)
T 3obb_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHA--AARERGLAMLD-APVSGGTAGA-----AA-------GTLT 136 (300)
T ss_dssp HHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHH--HHHTTTCEEEE-CCEESCHHHH-----HH-------TCEE
T ss_pred HHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEe-cCCCCCHHHH-----Hh-------CCEE
Confidence 75 57753 88999999999988765422 1211 11134666653 33 1 11111 12 3323
Q ss_pred EEeecCCCCHHHHHHHHHHHHHhCCCcccccc-hhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHH
Q 014863 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATT-LEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (417)
Q Consensus 262 liav~qd~sgea~e~a~al~~aiG~~~~iett-~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~ 336 (417)
|-+.. +.++.+.++-++..+|.. ++..- .-.=....+ --+.++.+...++.|+ +..+.+.|++++..+.
T Consensus 137 -imvGG--~~~~~~~~~p~l~~~g~~-i~~~G~~G~g~~~Kl-~~N~l~~~~~~a~aEa-~~la~~~Gld~~~~~~ 206 (300)
T 3obb_A 137 -FMVGG--DAEALEKARPLFEAMGRN-IFHAGPDGAGQVAKV-CNNQLLAVLMIGTAEA-MALGVANGLEAKVLAE 206 (300)
T ss_dssp -EEEES--CHHHHHHHHHHHHHHEEE-EEEEESTTHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHTTCCHHHHHH
T ss_pred -EEEeC--CHHHHHHHHHHHHHhCCC-EEEeCCccHHHHHHH-HHHHHHHHHHHHHHHH-HHHHHhcCCCHHHHHH
Confidence 22344 578999999999999953 11110 000000000 0112222223333443 4567899999987665
No 22
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.59 E-value=8.3e-15 Score=138.80 Aligned_cols=160 Identities=19% Similarity=0.164 Sum_probs=111.6
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCch--------------hHHHHHHcCceecCCCcC
Q 014863 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR--------------SFAEARAAGFTEENGTLG 170 (417)
Q Consensus 105 ~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~--------------s~~~A~~~G~~~~d~~~~ 170 (417)
...+.+ +||+|||+|+||.++|++|.+. |++|++++|+.++ ..+.+.+.|... ..
T Consensus 14 ~~~~~~-~kIgiIG~G~mG~alA~~L~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 82 (245)
T 3dtt_A 14 NLYFQG-MKIAVLGTGTVGRTMAGALADL------GHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH----LA 82 (245)
T ss_dssp -----C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE----EE
T ss_pred ccccCC-CeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee----cc
Confidence 467888 9999999999999999999999 9999888876443 122222334332 46
Q ss_pred CHHhhhccCCeEEEeecchhHHHHHHHH-HhcCCCCcEEEEec-cc----------------h-hhhhhccccCCCCCCc
Q 014863 171 DIYETISGSDLVLLLISDAAQADNYEKI-FSCMKPNSILGLSH-GF----------------L-LGHLQSMGLDFPKNIG 231 (417)
Q Consensus 171 ~~~Eav~~ADiViLavpd~a~~~Vl~eI-~p~Lk~GaiL~~a~-G~----------------~-i~~~~~~~i~~~~di~ 231 (417)
+++|++++||+||+++|++.+.+++.++ .+.+ +|++|++++ |+ . ...+++ .+| +.+
T Consensus 83 ~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~---~l~-~~~ 157 (245)
T 3dtt_A 83 AFADVAAGAELVVNATEGASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQR---TFP-EAK 157 (245)
T ss_dssp EHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHH---HST-TSE
T ss_pred CHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHH---HCC-CCe
Confidence 7889999999999999999999999888 7887 888887665 22 1 234443 445 469
Q ss_pred EEEeccCCchhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 232 VIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 232 VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
||+.+|+.++++....-.. -.|-..++.... +.++.+.+..++..+|..
T Consensus 158 vv~~~~~~~a~v~~~~~~a-----~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~ 206 (245)
T 3dtt_A 158 VVKTLNTMNASLMVDPGRA-----AGGDHSVFVSGN--DAAAKAEVATLLKSLGHQ 206 (245)
T ss_dssp EEECSTTSCHHHHHCGGGT-----GGGCCCEEEECS--CHHHHHHHHHHHHHTTCC
T ss_pred EEEeecccCHHHhcCcccc-----CCCCeeEEEECC--CHHHHHHHHHHHHHcCCC
Confidence 9999999999985211000 011222222222 678999999999999964
No 23
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.58 E-value=6.9e-14 Score=135.16 Aligned_cols=213 Identities=14% Similarity=0.110 Sum_probs=143.6
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc-----------C--------------ceec
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-----------G--------------FTEE 165 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~-----------G--------------~~~~ 165 (417)
|+||+|||+|+||.++|+.|..+ |++|++++++ .+..+.+.+. | +..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~------G~~V~l~d~~-~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~- 75 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH------GFAVTAYDIN-TDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY- 75 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEeCC-HHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-
Confidence 47999999999999999999999 9998887665 3334444332 2 222
Q ss_pred CCCcCCHHhhhccCCeEEEeecch--hHHHHHHHHHhcCCCCcEEE-EeccchhhhhhccccCCCCCCcEEEeccCCchh
Q 014863 166 NGTLGDIYETISGSDLVLLLISDA--AQADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (417)
Q Consensus 166 d~~~~~~~Eav~~ADiViLavpd~--a~~~Vl~eI~p~Lk~GaiL~-~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~ 242 (417)
..++++++++||+||+++|++ ...++++++.++++++++|+ .++++.+..+.. .++...+++.+||..|..
T Consensus 76 ---~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~---~~~~~~~~ig~h~~~p~~ 149 (283)
T 4e12_A 76 ---SDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVG---YTGRGDKFLALHFANHVW 149 (283)
T ss_dssp ---ESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHH---HHSCGGGEEEEEECSSTT
T ss_pred ---eCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHh---hcCCCcceEEEccCCCcc
Confidence 467888999999999999987 55678999999999999876 567777665543 223345899999998865
Q ss_pred hHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHH
Q 014863 243 SVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFR 322 (417)
Q Consensus 243 ~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~ 322 (417)
. +-...++++...+.+..+.+..++..+|...+.-. .+ . .-| +..-.+.+++..++.
T Consensus 150 ~--------------~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~---~~-~-~g~----i~nr~~~~~~~ea~~ 206 (283)
T 4e12_A 150 V--------------NNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELK---KE-K-AGY----VLNSLLVPLLDAAAE 206 (283)
T ss_dssp T--------------SCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECS---SC-C-TTT----THHHHHHHHHHHHHH
T ss_pred c--------------CceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEe---cC-C-CCE----EehHHHHHHHHHHHH
Confidence 5 12334667888899999999999999996422110 11 0 111 112223334444556
Q ss_pred HHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHhcHHHHHh
Q 014863 323 RFTENGMNEDLAYKNTVECIT--GIISKIISTQGMLAVYN 360 (417)
Q Consensus 323 ~~v~~Gl~~e~A~~~~~~~l~--~~~~~li~e~G~~~l~~ 360 (417)
.+.+.|.++++.....-...- -|--.++-..|++..++
T Consensus 207 l~~~g~~~~~~id~~~~~~~g~~~Gp~~~~D~~Gld~~~~ 246 (283)
T 4e12_A 207 LLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVGLTTAYN 246 (283)
T ss_dssp HHHTTSCCHHHHHHHHHHHHCCSSCHHHHHHHHCHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHhccCCCcCHHHHHHhccHHHHHH
Confidence 666667899976553322110 14556666667755544
No 24
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.56 E-value=3.5e-14 Score=137.33 Aligned_cols=201 Identities=16% Similarity=0.180 Sum_probs=130.5
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch-
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~- 189 (417)
|+||+|||+|+||.++|++|.+. |++|++++++ ....+...+.|+.. ..+++|+++++|+||+++|+.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~d~~-~~~~~~~~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~ 71 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLV-QSAVDGLVAAGASA----ARSARDAVQGADVVISMLPASQ 71 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHHTTCEE----CSSHHHHHTTCSEEEECCSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhC------CCeEEEEcCC-HHHHHHHHHCCCeE----cCCHHHHHhCCCeEEEECCCHH
Confidence 58999999999999999999999 9998877665 44556666778875 678999999999999999855
Q ss_pred hHHHHHH---HHHhcCCCCcEEEEeccchhh---hhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEE
Q 014863 190 AQADNYE---KIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (417)
Q Consensus 190 a~~~Vl~---eI~p~Lk~GaiL~~a~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~li 263 (417)
...+++. ++.+.++++++|+++...... .+.+ .....++.++. +|..++... ... |...++
T Consensus 72 ~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~--~~~~~g~~~~~-~pv~~~~~~---~~~-------g~l~~~ 138 (302)
T 2h78_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHA--AARERGLAMLD-APVSGGTAG---AAA-------GTLTFM 138 (302)
T ss_dssp HHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHH--HHHHTTCCEEE-CCEESCHHH---HHH-------TCEEEE
T ss_pred HHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHH--HHHHcCCEEEE-EEccCChhh---Hhc-------CCceEE
Confidence 5567887 899999999998876654322 2222 11123667887 487766542 122 232322
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 014863 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVE 340 (417)
Q Consensus 264 av~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~ 340 (417)
+.. +.+..+.+..++..+|.. ++...-......-.+-... +....-+++.-++..+.+.|+++++......+
T Consensus 139 -~~g--~~~~~~~~~~ll~~~g~~-~~~~~~~~~~~~~Kl~~n~-~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~ 210 (302)
T 2h78_A 139 -VGG--DAEALEKARPLFEAMGRN-IFHAGPDGAGQVAKVCNNQ-LLAVLMIGTAEAMALGVANGLEAKVLAEIMRR 210 (302)
T ss_dssp -EES--CHHHHHHHHHHHHHHEEE-EEEEESTTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred -eCC--CHHHHHHHHHHHHHhCCC-eEEcCCccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHc
Confidence 233 678999999999999964 2211100110000001111 11111223444555688999999887775443
No 25
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.56 E-value=2.1e-14 Score=133.96 Aligned_cols=154 Identities=14% Similarity=0.102 Sum_probs=111.3
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEE-EecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~ 189 (417)
|+||+|||+|+||.++|++|.+. |++|++ ++|..++..+.+.+.|... ..+..++++++|+||+++|++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~------g~~V~~v~~r~~~~~~~l~~~~g~~~----~~~~~~~~~~aDvVilavp~~ 92 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA------QIPAIIANSRGPASLSSVTDRFGASV----KAVELKDALQADVVILAVPYD 92 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT------TCCEEEECTTCGGGGHHHHHHHTTTE----EECCHHHHTTSSEEEEESCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCCHHHHHHHHHHhCCCc----ccChHHHHhcCCEEEEeCChH
Confidence 47999999999999999999999 998877 5555445445566667653 345566789999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEE-Eeccc--------------hhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccc
Q 014863 190 AQADNYEKIFSCMKPNSILG-LSHGF--------------LLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEI 254 (417)
Q Consensus 190 a~~~Vl~eI~p~Lk~GaiL~-~a~G~--------------~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~ 254 (417)
.+.++++++.+ + ++++|+ .+.|+ ....+++ .+| +.++++++|+.|..... .|...
T Consensus 93 ~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~---~l~-~~~vv~~~~~~~~~v~~----~g~~~ 162 (220)
T 4huj_A 93 SIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSE---LVP-GAKVVKAFNTLPAAVLA----ADPDK 162 (220)
T ss_dssp GHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHH---HST-TCEEEEESCSSCHHHHT----SCSBC
T ss_pred HHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHH---HCC-CCCEEECCCCCCHHHhh----hCccc
Confidence 99999998887 5 577765 44566 3455554 445 56899999999987741 12111
Q ss_pred cCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 255 NGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 255 ~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
.+.+...+++ .. +.++.+.+..++..+|..
T Consensus 163 ~~~~~~v~~~-g~--~~~~~~~v~~l~~~~G~~ 192 (220)
T 4huj_A 163 GTGSRVLFLS-GN--HSDANRQVAELISSLGFA 192 (220)
T ss_dssp SSCEEEEEEE-ES--CHHHHHHHHHHHHHTTCE
T ss_pred CCCCeeEEEe-CC--CHHHHHHHHHHHHHhCCC
Confidence 1222333332 22 488999999999999964
No 26
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.55 E-value=3e-14 Score=139.86 Aligned_cols=95 Identities=15% Similarity=0.157 Sum_probs=82.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecC-CchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecc
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK-GSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~-~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd 188 (417)
|+||+|||+|+||.++|++|.+. |+ +|++++++ +.+..+.+.+.|+.. ..+++|++++||+||+++|+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~------G~~~V~~~dr~~~~~~~~~~~~~g~~~----~~~~~e~~~~aDvVi~~vp~ 93 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA------GAIDMAAYDAASAESWRPRAEELGVSC----KASVAEVAGECDVIFSLVTA 93 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH------SCCEEEEECSSCHHHHHHHHHHTTCEE----CSCHHHHHHHCSEEEECSCT
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCCeEEEEcCCCCHHHHHHHHHCCCEE----eCCHHHHHhcCCEEEEecCc
Confidence 48999999999999999999999 99 88887775 245567777888875 57899999999999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccch
Q 014863 189 AAQADNYEKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~~a~G~~ 215 (417)
....++++++.+++++|++|++...+.
T Consensus 94 ~~~~~~~~~l~~~l~~~~ivvd~st~~ 120 (312)
T 3qsg_A 94 QAALEVAQQAGPHLCEGALYADFTSCS 120 (312)
T ss_dssp TTHHHHHHHHGGGCCTTCEEEECCCCC
T ss_pred hhHHHHHHhhHhhcCCCCEEEEcCCCC
Confidence 999999999999999999999887664
No 27
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.55 E-value=3.9e-13 Score=130.51 Aligned_cols=218 Identities=12% Similarity=0.092 Sum_probs=141.5
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHH-----------HHcCceecC-------------
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-----------RAAGFTEEN------------- 166 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A-----------~~~G~~~~d------------- 166 (417)
|+||+|||+|+||.++|..|.+. |++|++++++.+ ..+.+ .+.|.....
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~------G~~V~~~d~~~~-~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~ 87 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT------GHTVVLVDQTED-ILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLST 87 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHH-HHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhc
Confidence 58999999999999999999999 999887776533 23322 123321000
Q ss_pred -CCcCCHHhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEEE-EeccchhhhhhccccCCCCCCcEEEeccCCchh
Q 014863 167 -GTLGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (417)
Q Consensus 167 -~~~~~~~Eav~~ADiViLavpd~a~--~~Vl~eI~p~Lk~GaiL~-~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~ 242 (417)
....++++++++||+||+++|++.. .++++++.++++++++|+ .++|+.+..+.. .++..-+++..||+.|..
T Consensus 88 i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~---~~~~~~~~~g~h~~~P~~ 164 (302)
T 1f0y_A 88 IATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIAN---ATTRQDRFAGLHFFNPVP 164 (302)
T ss_dssp EEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTT
T ss_pred eEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHH---hcCCcccEEEEecCCCcc
Confidence 0145777899999999999998653 468889999999998875 567887766644 233334799999998865
Q ss_pred hHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHH
Q 014863 243 SVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFR 322 (417)
Q Consensus 243 ~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~ 322 (417)
. +..+ .+......+.+..+.+..++..+|... +.. .+. .-| +..-.+.+++.-++.
T Consensus 165 ~------------~~~~--~i~~g~~~~~e~~~~~~~l~~~~G~~~-v~~---~~~--~g~----i~nr~l~~~~~Ea~~ 220 (302)
T 1f0y_A 165 V------------MKLV--EVIKTPMTSQKTFESLVDFSKALGKHP-VSC---KDT--PGF----IVNRLLVPYLMEAIR 220 (302)
T ss_dssp T------------CCEE--EEECCTTCCHHHHHHHHHHHHHTTCEE-EEE---CSC--TTT----THHHHHHHHHHHHHH
T ss_pred c------------CceE--EEeCCCCCCHHHHHHHHHHHHHcCCce-EEe---cCc--ccc----cHHHHHHHHHHHHHH
Confidence 4 1223 355677788999999999999999532 211 110 011 112222345655666
Q ss_pred HHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHhcHHHHHhcc
Q 014863 323 RFTENGMNEDLAYKNTVECIT--GIISKIISTQGMLAVYNSF 362 (417)
Q Consensus 323 ~~v~~Gl~~e~A~~~~~~~l~--~~~~~li~e~G~~~l~~~v 362 (417)
.+.+.|+++++.........- .|-..+....|++.+++..
T Consensus 221 l~~~g~~~~~~id~~~~~g~g~p~GP~~~~D~~Gld~~~~~~ 262 (302)
T 1f0y_A 221 LYERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFIV 262 (302)
T ss_dssp HHHTTSSCHHHHHHHHHHHHCCSSCHHHHHHHHCHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 777777888876543322110 2344555566765555433
No 28
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.54 E-value=1.1e-13 Score=132.13 Aligned_cols=153 Identities=12% Similarity=0.028 Sum_probs=108.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchhH
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a~ 191 (417)
+||+|||+|+||.++|++|++. |++|+.+++. ++ +++|| |+++|++++
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~------G~~V~~~~~~-----------------------~~-~~~aD--ilavP~~ai 54 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSV------GHYVTVLHAP-----------------------ED-IRDFE--LVVIDAHGV 54 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHT------TCEEEECSSG-----------------------GG-GGGCS--EEEECSSCH
T ss_pred cEEEEEeeCHHHHHHHHHHHHC------CCEEEEecCH-----------------------HH-hccCC--EEEEcHHHH
Confidence 7999999999999999999999 9987655441 12 56789 999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecc-chhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeecCCCC
Q 014863 192 ADNYEKIFSCMKPNSILGLSHG-FLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD 270 (417)
Q Consensus 192 ~~Vl~eI~p~Lk~GaiL~~a~G-~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~s 270 (417)
.++++++.+++++|++|+++.| .+...+.. ..+.+..+|..||. +|.+..++.. +
T Consensus 55 ~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~---~~~~g~~fvg~HPm------------------~g~~~~i~a~---d 110 (232)
T 3dfu_A 55 EGYVEKLSAFARRGQMFLHTSLTHGITVMDP---LETSGGIVMSAHPI------------------GQDRWVASAL---D 110 (232)
T ss_dssp HHHHHHHHTTCCTTCEEEECCSSCCGGGGHH---HHHTTCEEEEEEEE------------------ETTEEEEEES---S
T ss_pred HHHHHHHHHhcCCCCEEEEECCcCHHHHHHH---HHhCCCcEEEeeeC------------------CCCceeeeCC---C
Confidence 9999999999999999998765 44333322 11346789999993 1345544433 5
Q ss_pred HHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHHHH
Q 014863 271 GRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRF 324 (417)
Q Consensus 271 gea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~ 324 (417)
.++++.++.|+..+|.. ++..+..++ |.|......+.-+.+++..+.+.+
T Consensus 111 ~~a~~~l~~L~~~lG~~-vv~~~~~~h---d~~~AAvsh~nhLv~L~~~A~~ll 160 (232)
T 3dfu_A 111 ELGETIVGLLVGELGGS-IVEIADDKR---AQLAAALTYAGFLSTLQRDASYFL 160 (232)
T ss_dssp HHHHHHHHHHHHHTTCE-ECCCCGGGH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCE-EEEeCHHHH---hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999974 444543344 666544433333333444444444
No 29
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.53 E-value=1.7e-13 Score=131.36 Aligned_cols=153 Identities=14% Similarity=0.090 Sum_probs=105.6
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCC--------CcCCHHhhhc---cC
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG--------TLGDIYETIS---GS 179 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~--------~~~~~~Eav~---~A 179 (417)
||||+|||+|+||.++|.+|.+. |++|++++|+. +..+...+.|...... ...+..++.+ ++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG------GNDVTLIDQWP-AHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQV 75 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC------CCcEEEEECCH-HHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCC
Confidence 47999999999999999999999 99988776653 3345555557543100 0113344444 89
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEE-eccchh-hhhhccccCCCCCCcEEE---------eccCCchhhHHHHH
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGL-SHGFLL-GHLQSMGLDFPKNIGVIA---------VCPKGMGPSVRRLY 248 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~-a~G~~i-~~~~~~~i~~~~di~VI~---------v~Pn~pg~~vr~ly 248 (417)
|+||+++|+....++++++.++++++++|++ ..|+.. ..+.+ .+++. +++. ..|+.+...
T Consensus 76 d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~---~~~~~-~vi~g~~~~~~~~~~p~~~~~~----- 146 (316)
T 2ew2_A 76 DLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEK---YVPKE-NILVGITMWTAGLEGPGRVKLL----- 146 (316)
T ss_dssp SEEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTT---TSCGG-GEEEEEECCCCEEEETTEEEEC-----
T ss_pred CEEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHH---HcCCc-cEEEEEeeeeeEEcCCCEEEEe-----
Confidence 9999999999989999999999999997764 467764 34443 33433 5553 344433222
Q ss_pred hhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 249 ~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
+.|.+.+ .+....+.+..+.+..++..+|..
T Consensus 147 -------~~g~~~i-~~~~~~~~~~~~~~~~ll~~~g~~ 177 (316)
T 2ew2_A 147 -------GDGEIEL-ENIDPSGKKFALEVVDVFQKAGLN 177 (316)
T ss_dssp -------SCCCEEE-EESSGGGHHHHHHHHHHHHHTTCC
T ss_pred -------cCCcEEE-eecCCCccHHHHHHHHHHHhCCCC
Confidence 4677764 444444677889999999999965
No 30
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.52 E-value=7e-13 Score=137.84 Aligned_cols=230 Identities=12% Similarity=0.114 Sum_probs=149.0
Q ss_pred chhhhccCcccccccc-----cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCch-------hHHHH
Q 014863 90 DEYIVRGGRDLFNLLP-----DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-------SFAEA 157 (417)
Q Consensus 90 ~e~~~~~g~~~f~~~~-----~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~-------s~~~A 157 (417)
.|+.++ +|-.|... ..-..|+||+|||.|.||.+||+.|.++ |++|++++++.++ .++.+
T Consensus 30 a~~~~~--~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~a------G~~V~l~D~~~e~a~~~i~~~l~~~ 101 (460)
T 3k6j_A 30 AHSLAG--QWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLA------GIETFLVVRNEQRCKQELEVMYARE 101 (460)
T ss_dssp TTCCTT--SCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred HHHhhc--cccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHC------CCeEEEEECcHHHHHHHHHHHHHHH
Confidence 444444 57666331 1223358999999999999999999999 9999888776442 22344
Q ss_pred HHcCceec-------C--CCcCCHHhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEEE-EeccchhhhhhccccC
Q 014863 158 RAAGFTEE-------N--GTLGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLD 225 (417)
Q Consensus 158 ~~~G~~~~-------d--~~~~~~~Eav~~ADiViLavpd~a~--~~Vl~eI~p~Lk~GaiL~-~a~G~~i~~~~~~~i~ 225 (417)
.+.|.... + ....++ +++++||+||.++|.... .+++.++.+.++++++|+ .++++.+..+.+ .
T Consensus 102 ~~~G~l~~~~~~~~~~~i~~t~dl-~al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~---~ 177 (460)
T 3k6j_A 102 KSFKRLNDKRIEKINANLKITSDF-HKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISS---V 177 (460)
T ss_dssp HHTTSCCHHHHHHHHTTEEEESCG-GGCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHT---T
T ss_pred HHcCCCCHHHHHHHhcceEEeCCH-HHHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHH---h
Confidence 45553210 0 013455 478999999999997643 468899999999999985 567787776654 3
Q ss_pred CCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccc
Q 014863 226 FPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGE 305 (417)
Q Consensus 226 ~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfge 305 (417)
.+...+++.+||..|...+ -..-|.+....+.+.++.+..++..+|...+. . .+ ..
T Consensus 178 ~~~p~r~iG~HffnPv~~m--------------~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~-v---~d--~p---- 233 (460)
T 3k6j_A 178 LRDPSNLVGIHFFNPANVI--------------RLVEIIYGSHTSSQAIATAFQACESIKKLPVL-V---GN--CK---- 233 (460)
T ss_dssp SSSGGGEEEEECCSSTTTC--------------CEEEEECCSSCCHHHHHHHHHHHHHTTCEEEE-E---SS--CC----
T ss_pred ccCCcceEEEEecchhhhC--------------CEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEE-E---ec--cc----
Confidence 3334589999998887651 12235567778999999999999999964221 1 11 11
Q ss_pred cccccch-HHHHHHHHHHHHHHcCCCHHHHHHHHHHH--HHHHHHHHHHHhcHHH
Q 014863 306 RGILLGA-VHGIVESLFRRFTENGMNEDLAYKNTVEC--ITGIISKIISTQGMLA 357 (417)
Q Consensus 306 qtvL~G~-~~a~iea~~~~~v~~Gl~~e~A~~~~~~~--l~~~~~~li~e~G~~~ 357 (417)
+-++.- +.+++..++..+.+.|.++++........ -+ |--.|+-..|++.
T Consensus 234 -Gfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~~~G~pm-GPf~l~D~vGlD~ 286 (460)
T 3k6j_A 234 -SFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIITNFGFLM-GPMTVADMNGFDV 286 (460)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTBSS-CHHHHHHHHCTHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHcCCCc-CHHHHHHHhchHH
Confidence 112222 22244445555568999999877754311 01 3445555556643
No 31
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.51 E-value=1.2e-13 Score=133.10 Aligned_cols=200 Identities=14% Similarity=0.066 Sum_probs=129.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecc-hh
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD-AA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd-~a 190 (417)
|||+|||+|+||.++|++|.+. |++|++++|+.+ ..+...+.|+.. ..+++|+++++|+||+++|+ ..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~-~~~~~~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~~ 70 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA------GCSVTIWNRSPE-KAEELAALGAER----AATPCEVVESCPVTFAMLADPAA 70 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG-GGHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCeEEEEcCCHH-HHHHHHHCCCee----cCCHHHHHhcCCEEEEEcCCHHH
Confidence 7999999999999999999999 999887776644 455666678875 67899999999999999995 56
Q ss_pred HHHHH---HHHHhcCCCCcEEEEeccchhhh---hhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEe
Q 014863 191 QADNY---EKIFSCMKPNSILGLSHGFLLGH---LQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 191 ~~~Vl---~eI~p~Lk~GaiL~~a~G~~i~~---~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~lia 264 (417)
..+++ +++.+++++|++|++..+..... +.+ .....++.++. +|-..+... ... |...+++
T Consensus 71 ~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~~---a~~-------g~l~~~~ 137 (287)
T 3pef_A 71 AEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGV--AVVAKGGRFLE-APVSGSKKP---AED-------GTLIILA 137 (287)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEE-CCEECCHHH---HHH-------TCEEEEE
T ss_pred HHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHH--HHHHhCCEEEE-CCCcCCHHH---Hhc-------CCEEEEE
Confidence 67888 78999999999999887764321 111 01123566666 773333321 122 2333333
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 014863 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVE 340 (417)
Q Consensus 265 v~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~ 340 (417)
.. +.+..+.+..++..+|.. ++...-......--+.... +.+..-+++.-++..+.+.|+++++.+.....
T Consensus 138 -gg--~~~~~~~~~~ll~~~g~~-~~~~g~~g~~~~~Kl~~N~-~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~ 208 (287)
T 3pef_A 138 -AG--DRNLYDEAMPGFEKMGKK-IIHLGDVGKGAEMKLVVNM-VMGGMMACFCEGLALGEKAGLATDAILDVIGA 208 (287)
T ss_dssp -EE--CHHHHHHHHHHHHHHEEE-EEECSSTTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -eC--CHHHHHHHHHHHHHhCCC-eEEeCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 33 467889999999999964 2211101110000011111 11111113333566788999999988876554
No 32
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.50 E-value=1.9e-13 Score=133.66 Aligned_cols=202 Identities=14% Similarity=0.038 Sum_probs=128.3
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch
Q 014863 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 110 g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~ 189 (417)
.|+||+|||+|+||.++|++|.+. |++|++++|+.+ ..+...+.|... ..+++|+++++|+||+++|+.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~-~~~~l~~~g~~~----~~~~~~~~~~aDvvi~~vp~~ 88 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKN------GFKVTVWNRTLS-KCDELVEHGASV----CESPAEVIKKCKYTIAMLSDP 88 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG-GGHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSH
T ss_pred cCCEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHH-HHHHHHHCCCeE----cCCHHHHHHhCCEEEEEcCCH
Confidence 358999999999999999999999 999888776644 445556778875 678999999999999999975
Q ss_pred -hHHHHH---HHHHhcCCCCcEEEEeccchhhh---hhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEE
Q 014863 190 -AQADNY---EKIFSCMKPNSILGLSHGFLLGH---LQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSS 262 (417)
Q Consensus 190 -a~~~Vl---~eI~p~Lk~GaiL~~a~G~~i~~---~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~l 262 (417)
...+++ +++.+.+++|++|+++++..... +.+ .....++.++. +|-..+... ... |...+
T Consensus 89 ~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~--~~~~~g~~~v~-~pv~g~~~~---a~~-------g~l~i 155 (310)
T 3doj_A 89 CAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINE--AITGKGGRFVE-GPVSGSKKP---AED-------GQLII 155 (310)
T ss_dssp HHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEE-CCEECCHHH---HHH-------TCEEE
T ss_pred HHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEe-CCCCCChhH---Hhc-------CCeEE
Confidence 556788 67899999999999888764321 111 01123566665 663222221 112 34333
Q ss_pred EeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 014863 263 FAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVE 340 (417)
Q Consensus 263 iav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~ 340 (417)
++ .. +.+..+.+..++..+|.. ++...-...-..--+-... +.+...+++.-++..+.+.|+++++.+.....
T Consensus 156 ~~-gg--~~~~~~~~~~ll~~~g~~-~~~~g~~g~a~~~Kl~~N~-~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~ 228 (310)
T 3doj_A 156 LA-AG--DKALFEESIPAFDVLGKR-SFYLGQVGNGAKMKLIVNM-IMGSMMNAFSEGLVLADKSGLSSDTLLDILDL 228 (310)
T ss_dssp EE-EE--CHHHHHHHHHHHHHHEEE-EEECSSTTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred EE-cC--CHHHHHHHHHHHHHhCCC-EEEeCCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 33 33 478899999999999963 2211100000000011111 11111122333556678999999988775443
No 33
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.50 E-value=1.8e-13 Score=131.87 Aligned_cols=201 Identities=14% Similarity=0.039 Sum_probs=127.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch-
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~- 189 (417)
|+||+|||+|+||.++|++|.+. |++|++++|+.++ .+...+.|... ..+++|+++++|+||+++|+.
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~----~~~~~~~~~~advvi~~v~~~~ 69 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA------GFDVTVWNRNPAK-CAPLVALGARQ----ASSPAEVCAACDITIAMLADPA 69 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH------TCCEEEECSSGGG-GHHHHHHTCEE----CSCHHHHHHHCSEEEECCSSHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHC------CCeEEEEcCCHHH-HHHHHHCCCee----cCCHHHHHHcCCEEEEEcCCHH
Confidence 68999999999999999999999 9998887776443 45555668775 678999999999999999986
Q ss_pred hHHHHH---HHHHhcCCCCcEEEEeccchhh---hhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEE
Q 014863 190 AQADNY---EKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (417)
Q Consensus 190 a~~~Vl---~eI~p~Lk~GaiL~~a~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~li 263 (417)
...+++ +++.+.+++|++|++++..... .+.+ .....++.++.. |-..+.. .... |...++
T Consensus 70 ~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~--~~~~~g~~~~~~-pv~g~~~---~a~~-------g~l~~~ 136 (287)
T 3pdu_A 70 AAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGA--AVTARGGRFLEA-PVSGTKK---PAED-------GTLIIL 136 (287)
T ss_dssp HHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEEC-CEECCHH---HHHH-------TCEEEE
T ss_pred HHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEEC-CccCCHH---HHhc-------CCEEEE
Confidence 556788 7789999999999888765432 1111 011235566653 5222221 1122 343333
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 014863 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVE 340 (417)
Q Consensus 264 av~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~ 340 (417)
+ .. +.+..+.+..++..+|.. ++...-...-..--+..... .+...+++.-++..+.+.|+++++.+....+
T Consensus 137 ~-gg--~~~~~~~~~~ll~~~g~~-~~~~g~~g~~~~~Kl~~N~~-~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~ 208 (287)
T 3pdu_A 137 A-AG--DQSLFTDAGPAFAALGKK-CLHLGEVGQGARMKLVVNMI-MGQMMTALGEGMALGRNCGLDGGQLLEVLDA 208 (287)
T ss_dssp E-EE--CHHHHHHTHHHHHHHEEE-EEECSSTTHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred E-eC--CHHHHHHHHHHHHHhCCC-EEEcCCCChHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 3 33 468889999999999953 22111000000000001111 1111112333456688999999998886665
No 34
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.47 E-value=3.9e-13 Score=130.72 Aligned_cols=200 Identities=16% Similarity=0.137 Sum_probs=128.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh-
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a- 190 (417)
+||+|||+|+||.++|++|.+. |++|++++|+ ....+...+.|... ...+++|+++++|+||+++|+..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~-~~~~~~~~~~g~~~---~~~~~~e~~~~aDvvi~~vp~~~~ 77 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA------GLSTWGADLN-PQACANLLAEGACG---AAASAREFAGVVDALVILVVNAAQ 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCSE---EESSSTTTTTTCSEEEECCSSHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHcCCcc---ccCCHHHHHhcCCEEEEECCCHHH
Confidence 7899999999999999999999 9998877665 44456666667652 03578899999999999999864
Q ss_pred HHHHH---HHHHhcCCCCcEEEEeccchhh---hhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEe
Q 014863 191 QADNY---EKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 191 ~~~Vl---~eI~p~Lk~GaiL~~a~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~lia 264 (417)
...++ +++.+.+++|++|++.+..... .+.+ .....++.++. +|-..+... -. .|...+++
T Consensus 78 ~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~~---a~-------~g~l~~~~ 144 (303)
T 3g0o_A 78 VRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAA--ALTALNLNMLD-APVSGGAVK---AA-------QGEMTVMA 144 (303)
T ss_dssp HHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHH--HHHTTTCEEEE-CCEESCHHH---HH-------TTCEEEEE
T ss_pred HHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHH--HHHHcCCeEEe-CCCCCChhh---hh-------cCCeEEEe
Confidence 45677 6789999999999988766432 1211 11123667776 774333321 11 34444343
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCcccccc--hhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 014863 265 VHQDVDGRATNVALGWSVALGSPFTFATT--LEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVE 340 (417)
Q Consensus 265 v~qd~sgea~e~a~al~~aiG~~~~iett--~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~ 340 (417)
.. +.+..+.+..++..+|.. ++... ...-.... +.... +.+...+.+.-++..+.+.|+++++.+....+
T Consensus 145 -gg--~~~~~~~~~~ll~~~g~~-~~~~~~~~g~a~~~K-l~~N~-~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~ 216 (303)
T 3g0o_A 145 -SG--SEAAFTRLKPVLDAVASN-VYRISDTPGAGSTVK-IIHQL-LAGVHIAAAAEAMALAARAGIPLDVMYDVVTH 216 (303)
T ss_dssp -EC--CHHHHHHHHHHHHHHEEE-EEEEESSTTHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTT
T ss_pred -CC--CHHHHHHHHHHHHHHCCC-EEECCCCCcHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 33 578899999999999963 22111 00000000 11111 11112222333455788999999988876543
No 35
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.47 E-value=1.8e-13 Score=131.41 Aligned_cols=201 Identities=14% Similarity=0.049 Sum_probs=120.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch-h
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~-a 190 (417)
|||+|||+|+||.+++++|.+. |++|+++++.. +..+...+.|+.. ..+++++++++|+|++++|+. .
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~V~~~~~~~-~~~~~~~~~g~~~----~~~~~~~~~~~Dvvi~~vp~~~~ 69 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH------GYPLIIYDVFP-DACKEFQDAGEQV----VSSPADVAEKADRIITMLPTSIN 69 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT------TCCEEEECSST-HHHHHHHTTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHcCCee----cCCHHHHHhcCCEEEEeCCCHHH
Confidence 5799999999999999999998 99888776654 3445555668764 568889999999999999754 5
Q ss_pred HHHHHHH---HHhcCCCCcEEEEeccchhhhhhccccCCC-CCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeec
Q 014863 191 QADNYEK---IFSCMKPNSILGLSHGFLLGHLQSMGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (417)
Q Consensus 191 ~~~Vl~e---I~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~-~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~ 266 (417)
..+++.+ +.+++++|++|+...|+...........++ .+.. +|++|...-...... |...++ +.
T Consensus 70 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~----~~~~p~~~g~~~a~~-------~~~~~~-~~ 137 (296)
T 2gf2_A 70 AIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAV----FMDAPVSGGVGAARS-------GNLTFM-VG 137 (296)
T ss_dssp HHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE----EEECCEESHHHHHHH-------TCEEEE-EE
T ss_pred HHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE----EEEcCCCCChhHHhc-------CcEEEE-eC
Confidence 5677775 556789999888888876543221000111 1222 233333221112222 344333 33
Q ss_pred CCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 014863 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTV 339 (417)
Q Consensus 267 qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~ 339 (417)
.+.+..+.+..++..+|.. ++.+.....-..--+............+.|++. .+.+.|+++++++....
T Consensus 138 --~~~~~~~~v~~l~~~~g~~-~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~-~~~~~G~~~~~~~~~~~ 206 (296)
T 2gf2_A 138 --GVEDEFAAAQELLGCMGSN-VVYCGAVGTGQAAKICNNMLLAISMIGTAEAMN-LGIRLGLDPKLLAKILN 206 (296)
T ss_dssp --SCGGGHHHHHHHHTTTEEE-EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHcCC-eEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHH
Confidence 3577889999999999964 111100000000000000001111122445544 88999999988777544
No 36
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.46 E-value=9.8e-13 Score=137.32 Aligned_cols=214 Identities=11% Similarity=0.124 Sum_probs=142.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-----------cCceecC---------CCcC
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEEN---------GTLG 170 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~d---------~~~~ 170 (417)
++||+|||+|+||.+||++|.++ |++|++++++ .+..+.+.+ .|..... ....
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a------G~~V~l~D~~-~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH------GHQVLLYDIS-AEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVT 77 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSC-HHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeC
Confidence 37999999999999999999999 9998877665 333444332 3321000 0134
Q ss_pred CHHhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEE-EEeccchhhhhhccccCCCCCCcEEEeccCCchhhHHHH
Q 014863 171 DIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSIL-GLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (417)
Q Consensus 171 ~~~Eav~~ADiViLavpd~a~--~~Vl~eI~p~Lk~GaiL-~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~l 247 (417)
++ +++++||+||+++|++.. .+++.++.+.++++++| +.++++.+..+.. .+....+++..||..|.+.+
T Consensus 78 ~~-~~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~---~~~~p~~~ig~hf~~Pa~v~--- 150 (483)
T 3mog_A 78 DI-HALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAA---EIKNPERVAGLHFFNPAPVM--- 150 (483)
T ss_dssp CG-GGGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTT---TSSSGGGEEEEEECSSTTTC---
T ss_pred CH-HHhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHH---HccCccceEEeeecChhhhC---
Confidence 55 468999999999998854 47899999999999988 5788888876654 33344589999999998872
Q ss_pred HhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccc-hHHHHHHHHHHHHHH
Q 014863 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLG-AVHGIVESLFRRFTE 326 (417)
Q Consensus 248 y~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G-~~~a~iea~~~~~v~ 326 (417)
.. ..++.....+.+..+.+..++..+|...+. . .+. . +-++. .+.+++..++..+.+
T Consensus 151 ----------~L-vevv~g~~Ts~e~~~~~~~l~~~lGk~~v~-v---~d~--~-----Gfi~Nr~l~~~~~Ea~~l~~~ 208 (483)
T 3mog_A 151 ----------KL-VEVVSGLATAAEVVEQLCELTLSWGKQPVR-C---HST--P-----GFIVNRVARPYYSEAWRALEE 208 (483)
T ss_dssp ----------CE-EEEEECSSCCHHHHHHHHHHHHHTTCEEEE-E---ESC--T-----TTTHHHHTHHHHHHHHHHHHT
T ss_pred ----------Ce-EEEecCCCCCHHHHHHHHHHHHHhCCEEEE-E---ecc--C-----cchHHHHHHHHHHHHHHHHHh
Confidence 13 345667788999999999999999964211 1 111 0 11222 222255556666677
Q ss_pred cCCCHHHHHHHHHHHH--HHHHHHHHHHhcHHHHHh
Q 014863 327 NGMNEDLAYKNTVECI--TGIISKIISTQGMLAVYN 360 (417)
Q Consensus 327 ~Gl~~e~A~~~~~~~l--~~~~~~li~e~G~~~l~~ 360 (417)
.|.++++..+..-... .-|--.++-..|++..+.
T Consensus 209 g~~~~~~id~a~~~~~G~p~GP~~l~D~~Gld~~~~ 244 (483)
T 3mog_A 209 QVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVNFA 244 (483)
T ss_dssp TCSCHHHHHHHHHHTTCCSSCHHHHHHHHCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCCCCCHHHHHHHhchHHHHH
Confidence 7778887666333210 014445566667654443
No 37
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.46 E-value=3.8e-13 Score=130.86 Aligned_cols=199 Identities=16% Similarity=0.102 Sum_probs=128.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeec-chh
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS-DAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavp-d~a 190 (417)
+||+|||+|+||.++|.+|.+. |++|+++++...+ .+...+.|+.. ..+.+++++++|+||+++| +..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~------g~~V~~~~~~~~~-~~~~~~~g~~~----~~~~~~~~~~~DvVi~av~~~~~ 99 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM------GHTVTVWNRTAEK-CDLFIQEGARL----GRTPAEVVSTCDITFACVSDPKA 99 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSGGG-GHHHHHTTCEE----CSCHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhC------CCEEEEEeCCHHH-HHHHHHcCCEE----cCCHHHHHhcCCEEEEeCCCHHH
Confidence 7899999999999999999998 9988777765443 44555578764 5678899999999999999 677
Q ss_pred HHHHHHH---HHhcCCCCcEEEEeccch---hhhhhccccCC-CCCCcEEEe-ccCCchhhHHHHHhhcccccCCCceEE
Q 014863 191 QADNYEK---IFSCMKPNSILGLSHGFL---LGHLQSMGLDF-PKNIGVIAV-CPKGMGPSVRRLYVQGKEINGAGINSS 262 (417)
Q Consensus 191 ~~~Vl~e---I~p~Lk~GaiL~~a~G~~---i~~~~~~~i~~-~~di~VI~v-~Pn~pg~~vr~ly~~G~e~~G~Gv~~l 262 (417)
..+++.+ +.+.+++|++|+++.... ...+.+ .+ ..++.++.. ++++|... . .|...+
T Consensus 100 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~---~~~~~~~~~v~~p~~g~~~~~-----~-------~g~~~~ 164 (316)
T 2uyy_A 100 AKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQ---VIVSRGGRFLEAPVSGNQQLS-----N-------DGMLVI 164 (316)
T ss_dssp HHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHH---HHHHTTCEEEECCEESCHHHH-----H-------HTCEEE
T ss_pred HHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCEEEEcCccCChhHH-----h-------hCCEEE
Confidence 7788875 458899999888776553 222222 11 134566643 23333222 1 344443
Q ss_pred EeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH-HHHHHHHHHHHcCCCHHHHHHHHHHH
Q 014863 263 FAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-IVESLFRRFTENGMNEDLAYKNTVEC 341 (417)
Q Consensus 263 iav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a-~iea~~~~~v~~Gl~~e~A~~~~~~~ 341 (417)
+. .. +.+..+.+..++..+|....+.... +......-....++++... +.|++.. +++.|+++++++....++
T Consensus 165 ~~-~g--~~~~~~~v~~ll~~~g~~~~~~~~~--~~~~~~K~~~n~~~~~~~~~~~Ea~~l-a~~~G~~~~~~~~~~~~~ 238 (316)
T 2uyy_A 165 LA-AG--DRGLYEDCSSCFQAMGKTSFFLGEV--GNAAKMMLIVNMVQGSFMATIAEGLTL-AQVTGQSQQTLLDILNQG 238 (316)
T ss_dssp EE-EE--CHHHHHHTHHHHHHHEEEEEECSST--THHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHHHHS
T ss_pred Ee-CC--CHHHHHHHHHHHHHhcCCEEEeCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHcC
Confidence 33 33 4688889999999999642111110 1000111122345555444 5555544 999999999988877665
Q ss_pred H
Q 014863 342 I 342 (417)
Q Consensus 342 l 342 (417)
.
T Consensus 239 ~ 239 (316)
T 2uyy_A 239 Q 239 (316)
T ss_dssp T
T ss_pred C
Confidence 4
No 38
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.45 E-value=3e-13 Score=132.40 Aligned_cols=196 Identities=12% Similarity=0.119 Sum_probs=119.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchhH
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a~ 191 (417)
+||||||+|+||.+||+||.++ |++|++++|+.++ .+...+.|... +.++.|+++++|+||+++|+..+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~------G~~V~v~dr~~~~-~~~l~~~G~~~----~~s~~e~~~~~dvvi~~l~~~~~ 74 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA------GYELVVWNRTASK-AEPLTKLGATV----VENAIDAITPGGIVFSVLADDAA 74 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEC--------CTTTTTTCEE----CSSGGGGCCTTCEEEECCSSHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHHcCCeE----eCCHHHHHhcCCceeeeccchhh
Confidence 5899999999999999999999 9999888776443 44455678876 67999999999999999998877
Q ss_pred H-HHH-HHHHhcCCCCcEEEEeccchhh---hhhccccCCCCCCcEEEecc-CC-chhhHHHHHhhcccccCCCceEEEe
Q 014863 192 A-DNY-EKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCP-KG-MGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 192 ~-~Vl-~eI~p~Lk~GaiL~~a~G~~i~---~~~~~~i~~~~di~VI~v~P-n~-pg~~vr~ly~~G~e~~G~Gv~~lia 264 (417)
. +++ .++.+.+++|+++++.+-.... .+.+ .....++.++- +| .+ |... +. |-..++
T Consensus 75 ~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~--~~~~~g~~~ld-apVsGg~~~a-----~~-------g~l~im- 138 (297)
T 4gbj_A 75 VEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQ--VHEWYGAHYVG-APIFARPEAV-----RA-------KVGNIC- 138 (297)
T ss_dssp HHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEE-CCEECCHHHH-----HH-------TCCEEE-
T ss_pred HHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHH--HHHhcCCceec-CCcCCCcccc-----cc-------ccceee-
Confidence 5 454 4688999999999988765422 1111 11124556653 23 11 1111 12 233322
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCccccc--chhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 014863 265 VHQDVDGRATNVALGWSVALGSPFTFAT--TLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTV 339 (417)
Q Consensus 265 v~qd~sgea~e~a~al~~aiG~~~~iet--t~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~ 339 (417)
+.. +.++.+.++.++..+|.. ++.. ..-.=.... +-.+..+.+...++.| ++..+.+.|++++..+....
T Consensus 139 ~gG--~~~~~~~~~~~l~~~g~~-i~~~g~~~G~g~~~K-l~~N~~~~~~~~~~aE-a~~la~~~Gld~~~~~~~l~ 210 (297)
T 4gbj_A 139 LSG--NAGAKERIKPIVENFVKG-VFDFGDDPGAANVIK-LAGNFMIACSLEMMGE-AFTMAEKNGISRQSIYEMLT 210 (297)
T ss_dssp EEE--CHHHHHHHHHHHHTTCSE-EEECCSCTTHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHTTCCHHHHHHHHH
T ss_pred ccc--chhHHHHHHHHHHHhhCC-eEEecCCccHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHH
Confidence 333 568899999999999963 1110 000000000 0011111222222233 34567899999998877543
No 39
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.45 E-value=5.6e-12 Score=123.88 Aligned_cols=204 Identities=12% Similarity=0.064 Sum_probs=136.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc-------CceecCCCcCCHHhhhccCCeEEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------GFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~-------G~~~~d~~~~~~~Eav~~ADiViL 184 (417)
|||+|||+|.||.+||++|. . |++|++++++ ....+.+.+. ++.. ..++++ +++||+||.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a------G~~V~v~d~~-~~~~~~~~~~l~~~~~~~i~~----~~~~~~-~~~aDlVie 79 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S------KHEVVLQDVS-EKALEAAREQIPEELLSKIEF----TTTLEK-VKDCDIVME 79 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSC-HHHHHHHHHHSCGGGGGGEEE----ESSCTT-GGGCSEEEE
T ss_pred CeEEEEeeCHHHHHHHHHHH-c------CCEEEEEECC-HHHHHHHHHHHHHHHhCCeEE----eCCHHH-HcCCCEEEE
Confidence 89999999999999999999 9 9999887765 4445666665 5553 456665 899999999
Q ss_pred eecchhHH--HHHHHHHhcCCCCcEEE-EeccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceE
Q 014863 185 LISDAAQA--DNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (417)
Q Consensus 185 avpd~a~~--~Vl~eI~p~Lk~GaiL~-~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~ 261 (417)
++|+.... .++.++.+. +|++|+ .++++++..+.. ......+++.+||--|... +-..
T Consensus 80 avpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~---~~~~~~r~~G~Hf~~Pv~~--------------~~lv 140 (293)
T 1zej_A 80 AVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAE---RLDSPSRFLGVHWMNPPHV--------------MPLV 140 (293)
T ss_dssp CCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTTT--------------CCEE
T ss_pred cCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHH---HhhcccceEeEEecCcccc--------------CCEE
Confidence 99988763 466777665 898875 667777765543 2222347999999777543 2344
Q ss_pred EEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 014863 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVEC 341 (417)
Q Consensus 262 liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~~ 341 (417)
.+.+....+.+..+.+..++..+|.. ++.. .+. ...-+ ++ .+.+.|++. .+.+ |+++++........
T Consensus 141 eiv~g~~t~~~~~~~~~~l~~~lGk~-~v~v---~d~---fi~Nr-ll---~~~~~EA~~-l~~~-Gv~~e~id~~~~~g 207 (293)
T 1zej_A 141 EIVISRFTDSKTVAFVEGFLRELGKE-VVVC---KGQ---SLVNR-FN---AAVLSEASR-MIEE-GVRAEDVDRVWKHH 207 (293)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHTTCE-EEEE---ESS---CHHHH-HH---HHHHHHHHH-HHHH-TCCHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHHHcCCe-EEEe---ccc---ccHHH-HH---HHHHHHHHH-HHHh-CCCHHHHHHHHHhc
Confidence 46667778999999999999999964 2211 111 11111 11 133445444 3444 99988776654322
Q ss_pred HH--H---HHHHHHHHhcHHHHHh
Q 014863 342 IT--G---IISKIISTQGMLAVYN 360 (417)
Q Consensus 342 l~--~---~~~~li~e~G~~~l~~ 360 (417)
.- . |--.++-..|++..++
T Consensus 208 ~g~~~~~~GP~~l~D~~Gld~~~~ 231 (293)
T 1zej_A 208 LGLLYTLFGPLGNLDYIGLDVAYY 231 (293)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHhchHHHHH
Confidence 11 1 4556667777755443
No 40
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.45 E-value=2.4e-12 Score=125.74 Aligned_cols=198 Identities=16% Similarity=0.052 Sum_probs=125.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh-
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a- 190 (417)
+||+|||+|+||.++|++|++. |++|++++|+ ....+.+.+.|... ..+++|+++++|+||+++|+..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~------G~~V~~~dr~-~~~~~~~~~~g~~~----~~~~~e~~~~aDvVi~~vp~~~~ 78 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ------GKRVAIWNRS-PGKAAALVAAGAHL----CESVKAALSASPATIFVLLDNHA 78 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEECSS-HHHHHHHHHHTCEE----CSSHHHHHHHSSEEEECCSSHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhcCCEEEEEeCCHHH
Confidence 8999999999999999999999 9998877665 44455556668775 5789999999999999999876
Q ss_pred HHHHHH--HHHhcCCCCcEEEEeccchhh---hhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEee
Q 014863 191 QADNYE--KIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (417)
Q Consensus 191 ~~~Vl~--eI~p~Lk~GaiL~~a~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav 265 (417)
..+++. .+.+ +++|++|++++..... .+.+ .....++.++.. |-..++.. . |.+-..++ +
T Consensus 79 ~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~--~~~~~g~~~vda-pv~g~~~~-----~-----~~~~~~i~-~ 143 (306)
T 3l6d_A 79 THEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQG--LVNQAGGHYVKG-MIVAYPRN-----V-----GHRESHSI-H 143 (306)
T ss_dssp HHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHH--HHHHTTCEEEEE-EEESCGGG-----T-----TCTTCEEE-E
T ss_pred HHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEec-ccccCccc-----c-----cCCceEEE-E
Confidence 567776 5644 5789999988766422 1211 011245677664 52211110 1 12222223 3
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhh-hcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 014863 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRS-DIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVEC 341 (417)
Q Consensus 266 ~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~-dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~~ 341 (417)
.. +.+..+.++.++..+|. +++....-++... .++. .++.+...++.| ++..+.+.|++++..+....+.
T Consensus 144 gg--~~~~~~~~~~ll~~lg~-~~~~~~~g~~~g~g~~~k--~~~~~~~~~~~E-a~~la~~~Gld~~~~~~~~~~~ 214 (306)
T 3l6d_A 144 TG--DREAFEQHRALLEGLAG-HTVFLPWDEALAFATVLH--AHAFAAMVTFFE-AVGAGDRFGLPVSKTARLLLET 214 (306)
T ss_dssp EE--CHHHHHHHHHHHHTTCS-EEEECCHHHHHHHHHHHH--HHHHHHHHHHHH-HHHHHHHTTCCHHHHHHHHHHH
T ss_pred cC--CHHHHHHHHHHHHHhcC-CEEEecCCCCccHHHHHH--HHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHh
Confidence 33 47899999999999976 3322200010000 1111 122222333344 4456899999999998866654
No 41
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.44 E-value=1e-12 Score=136.95 Aligned_cols=192 Identities=14% Similarity=0.092 Sum_probs=126.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc---CceecCCCcCCHHhhhcc---CCeEEEe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISG---SDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~---G~~~~d~~~~~~~Eav~~---ADiViLa 185 (417)
++|+|||+|+||.++|++|.+. |++|.+++|+.++..+...+. |+.. ..+++|++++ +|+||++
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~------G~~V~v~~r~~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvVil~ 85 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR------GYTVSIFNRSREKTEEVIAENPGKKLVP----YYTVKEFVESLETPRRILLM 85 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHHHHHHHHHHSTTSCEEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred CeEEEEccHHHHHHHHHHHHhC------CCeEEEEeCCHHHHHHHHhhCCCCCeEE----eCCHHHHHhCCCCCCEEEEE
Confidence 7899999999999999999999 999988877644433333332 7764 5688898887 9999999
Q ss_pred ecc-hhHHHHHHHHHhcCCCCcEEEEec-cch--hhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceE
Q 014863 186 ISD-AAQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (417)
Q Consensus 186 vpd-~a~~~Vl~eI~p~Lk~GaiL~~a~-G~~--i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~ 261 (417)
||+ +...++++++.|++++|++|++.+ |.. ...+.+ .....++.++ .+|...++.. ... |. .
T Consensus 86 Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~--~l~~~g~~~v-~~pv~gg~~~---a~~-------g~-~ 151 (480)
T 2zyd_A 86 VKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNR--ELSAEGFNFI-GTGVSGGEEG---ALK-------GP-S 151 (480)
T ss_dssp SCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEE-EEEEESHHHH---HHH-------CC-E
T ss_pred CCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH--HHHHCCCCee-CCccccCHhH---Hhc-------CC-e
Confidence 999 577889999999999999888665 432 122222 0112356676 4575444431 122 34 3
Q ss_pred EEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH-----------HHHHHHHH---HHH-
Q 014863 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-----------IVESLFRR---FTE- 326 (417)
Q Consensus 262 liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a-----------~iea~~~~---~v~- 326 (417)
+.+.. +.++.+.+..++..+|.... . -|+.....++ .|..+. ++.++.|. +++
T Consensus 152 -i~~gg--~~~~~~~v~~ll~~~g~~~~-d----Ge~~v~~~g~----~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~ 219 (480)
T 2zyd_A 152 -IMPGG--QKEAYELVAPILTKIAAVAE-D----GEPCVTYIGA----DGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGG 219 (480)
T ss_dssp -EEEES--CHHHHHHHHHHHHHHSCBCT-T----SCBSBCCCBS----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -EEecC--CHHHHHHHHHHHHHHhcccc-C----CCceEEEECC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33344 47899999999999996300 0 0111112222 233332 34555555 788
Q ss_pred cCCCHHHHHHHHH
Q 014863 327 NGMNEDLAYKNTV 339 (417)
Q Consensus 327 ~Gl~~e~A~~~~~ 339 (417)
.|++++++.....
T Consensus 220 lGl~~~~~~~l~~ 232 (480)
T 2zyd_A 220 LNLTNEELAQTFT 232 (480)
T ss_dssp HCCCHHHHHHHHH
T ss_pred cCCCHHHHHHHHH
Confidence 6999999887663
No 42
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.43 E-value=1.6e-12 Score=126.40 Aligned_cols=193 Identities=13% Similarity=0.093 Sum_probs=122.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch-h
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~-a 190 (417)
+||+|||+|.||.++|++|.+. |++|++++++.+ ..+.+.+.|+.. ..+++|+++ +|+||+++|+. .
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~-~~~~~~~~g~~~----~~~~~~~~~-aDvvi~~vp~~~~ 83 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW------PGGVTVYDIRIE-AMTPLAEAGATL----ADSVADVAA-ADLIHITVLDDAQ 83 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS------TTCEEEECSSTT-TSHHHHHTTCEE----CSSHHHHTT-SSEEEECCSSHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCHH-HHHHHHHCCCEE----cCCHHHHHh-CCEEEEECCChHH
Confidence 6899999999999999999999 999888776644 345566678875 678999999 99999999965 5
Q ss_pred HHHHHHHHHhcCCCCcEEEEeccchhh---hhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeecC
Q 014863 191 QADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (417)
Q Consensus 191 ~~~Vl~eI~p~Lk~GaiL~~a~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~q 267 (417)
..++++++.+++++|++|++.+..... .+.+ .....++.++. +|-..+.. .... |...++ +..
T Consensus 84 ~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~---~a~~-------g~l~~~-~gg 149 (296)
T 3qha_A 84 VREVVGELAGHAKPGTVIAIHSTISDTTAVELAR--DLKARDIHIVD-APVSGGAA---AAAR-------GELATM-VGA 149 (296)
T ss_dssp HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHH--HHGGGTCEEEE-CCEESCHH---HHHH-------TCEEEE-EEC
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHH--HHHHcCCEEEe-CCCcCCHH---HHhc-------CCccEE-ecC
Confidence 567999999999999999988766422 1211 01123556654 45322222 1122 333333 333
Q ss_pred CCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHH
Q 014863 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLA 334 (417)
Q Consensus 268 d~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A 334 (417)
+.+..+.+..++..+|.. ++...-...-..--+.... +.+...+++.-++..+.+.|+++++.
T Consensus 150 --~~~~~~~~~~ll~~~g~~-~~~~g~~g~a~~~Kl~~N~-~~~~~~~~~~E~~~l~~~~G~d~~~~ 212 (296)
T 3qha_A 150 --DREVYERIKPAFKHWAAV-VIHAGEPGAGTRMKLARNM-LTFTSYAAACEAMKLAEAAGLDLQAL 212 (296)
T ss_dssp --CHHHHHHHHHHHHHHEEE-EEEEESTTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred --CHHHHHHHHHHHHHHcCC-eEEcCChhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 578899999999999963 2211100000000011111 11111112333556678999999887
No 43
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.43 E-value=9.9e-13 Score=137.70 Aligned_cols=190 Identities=16% Similarity=0.064 Sum_probs=124.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-----cCceecCCCcCCHHhhhcc---CCeEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----AGFTEENGTLGDIYETISG---SDLVL 183 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-----~G~~~~d~~~~~~~Eav~~---ADiVi 183 (417)
.+|||||+|+||.++|++|.+. |++|.+++|+.++ .+...+ .|+.. ..+++|++++ +|+||
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~------G~~V~v~dr~~~~-~~~l~~~~~~~~gi~~----~~s~~e~v~~l~~aDvVi 79 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH------GFTVCAYNRTQSK-VDHFLANEAKGKSIIG----ATSIEDFISKLKRPRKVM 79 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSHH-HHHHHHTTTTTSSEEC----CSSHHHHHHTSCSSCEEE
T ss_pred CCEEEEeeHHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHHcccccCCCeEE----eCCHHHHHhcCCCCCEEE
Confidence 6899999999999999999999 9999888877554 444444 47764 5688898887 99999
Q ss_pred Eeecch-hHHHHHHHHHhcCCCCcEEEEeccchh---hhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCc
Q 014863 184 LLISDA-AQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGI 259 (417)
Q Consensus 184 Lavpd~-a~~~Vl~eI~p~Lk~GaiL~~a~G~~i---~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv 259 (417)
++||+. ...++++++.+++++|++|++.+.... ..+.+ .....++.++ .+|-..++. .... |.
T Consensus 80 l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~--~l~~~g~~~v-~~pVsgg~~---~a~~-------G~ 146 (497)
T 2p4q_A 80 LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYE--ELKKKGILFV-GSGVSGGEE---GARY-------GP 146 (497)
T ss_dssp ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEE-EEEEESHHH---HHHH-------CC
T ss_pred EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHH--HHHHcCCcee-CCCcccChh---Hhhc-------CC
Confidence 999994 677899999999999999887654321 22221 0112356666 356322222 1122 34
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH-----------HHHHHHHH---HH
Q 014863 260 NSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-----------IVESLFRR---FT 325 (417)
Q Consensus 260 ~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a-----------~iea~~~~---~v 325 (417)
. +.+.. +.++.+.+..++..+|... . -|.....+++ .|.++. ++.++.|. ++
T Consensus 147 -~-im~gg--~~e~~~~v~~ll~~~g~~~--d----Ge~~v~~vg~----~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~ 212 (497)
T 2p4q_A 147 -S-LMPGG--SEEAWPHIKNIFQSISAKS--D----GEPCCEWVGP----AGAGHYVKMVHNGIEYGDMQLICEAYDIMK 212 (497)
T ss_dssp -E-EEEEE--CGGGHHHHHHHHHHHSCEE--T----TEESCCCCEE----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -e-EEecC--CHHHHHHHHHHHHHhcCcc--C----CCCceEEECC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 33343 5678899999999999630 0 0000112222 223222 24444444 78
Q ss_pred H-cCCCHHHHHHHHH
Q 014863 326 E-NGMNEDLAYKNTV 339 (417)
Q Consensus 326 ~-~Gl~~e~A~~~~~ 339 (417)
+ .|++++++....-
T Consensus 213 ~~lGl~~~~~~~~~~ 227 (497)
T 2p4q_A 213 RLGGFTDKEISDVFA 227 (497)
T ss_dssp HTTCCCHHHHHHHHH
T ss_pred HccCCCHHHHHHHHH
Confidence 8 5999998887663
No 44
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.42 E-value=1.4e-12 Score=125.33 Aligned_cols=197 Identities=16% Similarity=0.215 Sum_probs=124.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch-h
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~-a 190 (417)
+||+|||+|.||.+++.+|.+. |++|.++++. .+..+...+.|+.. ..+++++++++|+|++++|+. .
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~v~~~~~ 74 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA------GYSLVVSDRN-PEAIADVIAAGAET----ASTAKAIAEQCDVIITMLPNSPH 74 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred ceEEEECchHHHHHHHHHHHhC------CCEEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhCCCEEEEECCCHHH
Confidence 5899999999999999999998 9988776654 44455555668775 568889999999999999954 4
Q ss_pred HHHHH---HHHHhcCCCCcEEEEeccc-h--hhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEe
Q 014863 191 QADNY---EKIFSCMKPNSILGLSHGF-L--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 191 ~~~Vl---~eI~p~Lk~GaiL~~a~G~-~--i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~lia 264 (417)
...++ +++.+.+++|++|++.+.. . ...+.+ .....++.++.. |-.+++.. ...| +... ++
T Consensus 75 ~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~--~~~~~g~~~~~~-pv~~~~~~---~~~~------~~~~-~~ 141 (299)
T 1vpd_A 75 VKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISD--ALKAKGVEMLDA-PVSGGEPK---AIDG------TLSV-MV 141 (299)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHH--HHHTTTCEEEEC-CEESHHHH---HHHT------CEEE-EE
T ss_pred HHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEEe-cCCCCHhH---HhcC------CEEE-Ee
Confidence 56777 6788999999988765433 2 223322 111235666654 53333221 1122 3443 33
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccc-cchHHH-HHHHHHHH---HHHcCCCHHHHHHHHH
Q 014863 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGIL-LGAVHG-IVESLFRR---FTENGMNEDLAYKNTV 339 (417)
Q Consensus 265 v~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL-~G~~~a-~iea~~~~---~v~~Gl~~e~A~~~~~ 339 (417)
.. +.+..+.+..++..+|.. ++.. .+.....+ .-+ .....+ ++.++.|. +++.|+++++++..+.
T Consensus 142 -~~--~~~~~~~~~~ll~~~g~~-~~~~---~~~~~~~~---~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 211 (299)
T 1vpd_A 142 -GG--DKAIFDKYYDLMKAMAGS-VVHT---GDIGAGNV---TKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIR 211 (299)
T ss_dssp -ES--CHHHHHHHHHHHHTTEEE-EEEE---ESTTHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred -CC--CHHHHHHHHHHHHHHcCC-eEEe---CCcCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 22 578889999999999963 1111 11111100 001 111111 33444444 8999999999888766
Q ss_pred HHH
Q 014863 340 ECI 342 (417)
Q Consensus 340 ~~l 342 (417)
++.
T Consensus 212 ~~~ 214 (299)
T 1vpd_A 212 GGL 214 (299)
T ss_dssp TST
T ss_pred ccC
Confidence 644
No 45
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.41 E-value=4.2e-12 Score=127.52 Aligned_cols=153 Identities=14% Similarity=0.175 Sum_probs=107.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec---C-------CCcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE---N-------GTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~---d-------~~~~~~~Eav~~ADi 181 (417)
+||+|||.|+||.++|..|.++ |++|.++.|.. ...+...+.|.... + ....+++++++++|+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~------G~~V~l~~r~~-~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK------GQKVRLWSYES-DHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT------TCCEEEECSCH-HHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCE
T ss_pred CeEEEECccHHHHHHHHHHHHC------CCeEEEEeCCH-HHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCE
Confidence 7899999999999999999999 99988877753 33444444442100 0 013578899999999
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEE-Eeccchhh------hhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccc
Q 014863 182 VLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLLG------HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEI 254 (417)
Q Consensus 182 ViLavpd~a~~~Vl~eI~p~Lk~GaiL~-~a~G~~i~------~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~ 254 (417)
||+++|++...++++++.++++++++|+ .+.|+... .+.+ .+|...-.+...|+.....
T Consensus 103 VilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~---~l~~~~~~vlsgP~~a~ev----------- 168 (356)
T 3k96_A 103 ILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVAT---ELGQVPMAVISGPSLATEV----------- 168 (356)
T ss_dssp EEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHH---HHCSCCEEEEESSCCHHHH-----------
T ss_pred EEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHH---HcCCCCEEEEECccHHHHH-----------
Confidence 9999999999999999999999998765 55677542 2332 2333224578889876544
Q ss_pred cCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 255 NGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 255 ~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
+.|.+..+++.. .+.+..+.+..++...|..
T Consensus 169 -~~g~pt~~via~-~~~~~~~~v~~lf~~~~~r 199 (356)
T 3k96_A 169 -AANLPTAVSLAS-NNSQFSKDLIERLHGQRFR 199 (356)
T ss_dssp -HTTCCEEEEEEE-SCHHHHHHHHHHHCCSSEE
T ss_pred -HcCCCeEEEEec-CCHHHHHHHHHHhCCCCee
Confidence 245665454443 3567777888888877653
No 46
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.41 E-value=5.5e-13 Score=121.98 Aligned_cols=176 Identities=13% Similarity=0.071 Sum_probs=121.4
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcC-------ceecCCCcCCHHhhhccCCeEE
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-------FTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G-------~~~~d~~~~~~~Eav~~ADiVi 183 (417)
|||+||| +|.||.+++..|.+. |++|++.+|+.++..+.....| +. ..+.+++++++|+|+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~Vi 69 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL------GHEIVVGSRREEKAEAKAAEYRRIAGDASIT-----GMKNEDAAEACDIAV 69 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT------TCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-----EEEHHHHHHHCSEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHhccccccCCCC-----hhhHHHHHhcCCEEE
Confidence 5899999 999999999999998 9998887776433222222223 22 246778899999999
Q ss_pred EeecchhHHHHHHHHHhcCCCCcEEE-Eeccch--------------hhhhhccccCCCCCCcEEEeccCCchhhHHHHH
Q 014863 184 LLISDAAQADNYEKIFSCMKPNSILG-LSHGFL--------------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (417)
Q Consensus 184 Lavpd~a~~~Vl~eI~p~Lk~GaiL~-~a~G~~--------------i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly 248 (417)
+++|+....++++++.+.++ +++|+ .+.|+. ...+.+ .+| +.+++.+||+.|+.......
T Consensus 70 ~~~~~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~---~~~-~~~~v~~~~~~~~~~~~~~~ 144 (212)
T 1jay_A 70 LTIPWEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAE---VLE-SEKVVSALHTIPAARFANLD 144 (212)
T ss_dssp ECSCHHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHH---HHT-CSCEEECCTTCCHHHHHCTT
T ss_pred EeCChhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHH---hCC-CCeEEEEccchHHHHhhCcC
Confidence 99999998899988888784 77765 445675 344443 334 46899999999988742100
Q ss_pred hhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHh-CCCcccccchhhhhhhhcccccccccchHHHHHHHHH
Q 014863 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLF 321 (417)
Q Consensus 249 ~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~ai-G~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~ 321 (417)
+.|-..+++... +.++.+.+..++..+ |.. .+.. . -.+....+-++.|+++...+
T Consensus 145 -------~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~-~~~~---~-----~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 145 -------EKFDWDVPVCGD--DDESKKVVMSLISEIDGLR-PLDA---G-----PLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp -------CCCCEEEEEEES--CHHHHHHHHHHHHHSTTEE-EEEE---E-----SGGGHHHHHTHHHHHHHHHH
T ss_pred -------CCCCccEEEECC--cHHHHHHHHHHHHHcCCCC-ceec---c-----chhHHHHhcchHHHHHHHHH
Confidence 123233344343 678999999999999 863 1111 1 13455667778887766655
No 47
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.41 E-value=2e-12 Score=128.40 Aligned_cols=146 Identities=16% Similarity=0.122 Sum_probs=103.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcC--------------ceecCCCcCCHHhhhc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--------------FTEENGTLGDIYETIS 177 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G--------------~~~~d~~~~~~~Eav~ 177 (417)
+||+|||+|+||.++|.+|.+. |++|.+++|... ..+...+.| +.. ..+++++++
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 84 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKK------CREVCVWHMNEE-EVRLVNEKRENVLFLKGVQLASNITF----TSDVEKAYN 84 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTT------EEEEEEECSCHH-HHHHHHHHTBCTTTSTTCBCCTTEEE----ESCHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHcCcccccccccccccceee----eCCHHHHHc
Confidence 3999999999999999999988 999887776533 334444333 221 357888899
Q ss_pred cCCeEEEeecchhHHHHHHH----HHhcCCC-CcEEEEec-cchhh-------hhhccccCCCCCCcEEEeccCCchhhH
Q 014863 178 GSDLVLLLISDAAQADNYEK----IFSCMKP-NSILGLSH-GFLLG-------HLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (417)
Q Consensus 178 ~ADiViLavpd~a~~~Vl~e----I~p~Lk~-GaiL~~a~-G~~i~-------~~~~~~i~~~~di~VI~v~Pn~pg~~v 244 (417)
++|+||+++|++...+++++ |.+++++ +++|+.+. |+... .+.. .++.....++.+|+.+...
T Consensus 85 ~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~---~~~~~~~~v~~gp~~~~~~- 160 (366)
T 1evy_A 85 GAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGE---FLPSPLLSVLAGPSFAIEV- 160 (366)
T ss_dssp TCSSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTT---TSCGGGEEEEESSCCHHHH-
T ss_pred CCCEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHH---HCCCCcEEEEeCCChHHHH-
Confidence 99999999999888899998 9999988 88776554 77542 1111 2232223678889887544
Q ss_pred HHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHh
Q 014863 245 RRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL 284 (417)
Q Consensus 245 r~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~ai 284 (417)
+.|.+.++.+. ..+.+..+.+..++...
T Consensus 161 -----------~~g~~~~~~~~-~~~~~~~~~v~~ll~~~ 188 (366)
T 1evy_A 161 -----------ATGVFTCVSIA-SADINVARRLQRIMSTG 188 (366)
T ss_dssp -----------HTTCCEEEEEE-CSSHHHHHHHHHHHSCT
T ss_pred -----------HhCCceEEEEe-cCCHHHHHHHHHHhcCC
Confidence 24455434333 33567888899999988
No 48
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.40 E-value=2.5e-12 Score=125.15 Aligned_cols=156 Identities=13% Similarity=0.090 Sum_probs=105.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecC-CchhHHHHHHcCceecC-------CCcC--CHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEEN-------GTLG--DIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~-~~~s~~~A~~~G~~~~d-------~~~~--~~~Eav~~ADi 181 (417)
|||+|||+|+||.++|.+|.+. |++|++++|. +.+..+...+.|..... .... ++.++++++|+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~ 74 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN------GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEV 74 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH------CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCE
Confidence 5899999999999999999999 9998887761 23344555555531000 0123 66788899999
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEec-cc------hhhhhhcc-ccCCCC-CCcEEEeccCCchhhHHHHHhhcc
Q 014863 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH-GF------LLGHLQSM-GLDFPK-NIGVIAVCPKGMGPSVRRLYVQGK 252 (417)
Q Consensus 182 ViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~-G~------~i~~~~~~-~i~~~~-di~VI~v~Pn~pg~~vr~ly~~G~ 252 (417)
||+++|+....++++++.+ ++++++|++.. |+ ....+.+. ...++. ..-.++.+|+.+...
T Consensus 75 vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~--------- 144 (335)
T 1txg_A 75 VLLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREV--------- 144 (335)
T ss_dssp EEECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHH---------
T ss_pred EEEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHH---------
Confidence 9999999999999999999 99999877654 87 22222220 001111 113567888875433
Q ss_pred cccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 253 EINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 253 e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
+.|.+..+.+.. .+.+..+.+..++...|..
T Consensus 145 ---~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~ 175 (335)
T 1txg_A 145 ---AKRMPTTVVFSS-PSESSANKMKEIFETEYFG 175 (335)
T ss_dssp ---HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEE
T ss_pred ---HccCCcEEEEEe-CCHHHHHHHHHHhCCCcEE
Confidence 235543344433 3577888899999988864
No 49
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.40 E-value=8.4e-12 Score=129.55 Aligned_cols=193 Identities=12% Similarity=0.067 Sum_probs=125.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc---CceecCCCcCCHHhhhcc---CCeEEEe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISG---SDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~---G~~~~d~~~~~~~Eav~~---ADiViLa 185 (417)
++|+|||+|+||.++|++|.+. |++|.+++|..++..+...+. |+.. ..+++|++++ +|+||++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~------G~~V~v~dr~~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvVila 75 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR------GYTVAIYNRTTSKTEEVFKEHQDKNLVF----TKTLEEFVGSLEKPRRIMLM 75 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHTTTSCEEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred CcEEEEeeHHHHHHHHHHHHhC------CCEEEEEcCCHHHHHHHHHhCcCCCeEE----eCCHHHHHhhccCCCEEEEE
Confidence 6899999999999999999999 999888777644433333332 6664 5688898876 9999999
Q ss_pred ecch-hHHHHHHHHHhcCCCCcEEEEec-cch--hhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceE
Q 014863 186 ISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (417)
Q Consensus 186 vpd~-a~~~Vl~eI~p~Lk~GaiL~~a~-G~~--i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~ 261 (417)
||+. ...++++++.+++++|++|++.. |.. ...+.+ .....++.++ .+|...+... ... |..
T Consensus 76 vp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~--~l~~~g~~~v-~~pv~gg~~~---a~~-------g~~- 141 (474)
T 2iz1_A 76 VQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNA--ELADSGINFI-GTGVSGGEKG---ALL-------GPS- 141 (474)
T ss_dssp CCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HTTTSSCEEE-EEEECSHHHH---HHH-------CCC-
T ss_pred ccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHH--HHHHCCCeEE-CCCCCCChhh---hcc-------CCe-
Confidence 9995 56789999999999999887665 432 222322 1222466666 4676544431 122 343
Q ss_pred EEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH-----------HHHHHHHH---HHH-
Q 014863 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-----------IVESLFRR---FTE- 326 (417)
Q Consensus 262 liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a-----------~iea~~~~---~v~- 326 (417)
++ +.. +.+..+.+..++..+|....+. .|......+. .|..+. ++.++.|. +.+
T Consensus 142 i~-~gg--~~~~~~~v~~ll~~~g~~~~~d----ge~~~~~~g~----~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~ 210 (474)
T 2iz1_A 142 MM-PGG--QKEAYDLVAPIFEQIAAKAPQD----GKPCVAYMGA----NGAGHYVKMVHNGIEYGDMQLIAESYDLLKRI 210 (474)
T ss_dssp EE-EEE--CHHHHHHHHHHHHHHSCBCTTT----CCBSBCCCBS----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EE-ecC--CHHHHHHHHHHHHHHhcccccC----CCceEEEECC----ccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Confidence 23 333 5788999999999999641000 0110112222 223322 34444444 788
Q ss_pred cCCCHHHHHHHHH
Q 014863 327 NGMNEDLAYKNTV 339 (417)
Q Consensus 327 ~Gl~~e~A~~~~~ 339 (417)
.|++++++.....
T Consensus 211 ~Gl~~~~~~~l~~ 223 (474)
T 2iz1_A 211 LGLSNAEIQAIFE 223 (474)
T ss_dssp SCCCHHHHHHHHH
T ss_pred cCCCHHHHHHHHH
Confidence 7999998877664
No 50
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.39 E-value=9.5e-13 Score=125.51 Aligned_cols=193 Identities=11% Similarity=0.051 Sum_probs=123.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a 190 (417)
|+||+|||+|+||.+++.+|.+ |++|.++++...+ .+...+.|+.. .. ++++++++|+|++++|+..
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-------g~~V~~~~~~~~~-~~~~~~~g~~~----~~-~~~~~~~~D~vi~~v~~~~ 67 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-------RFPTLVWNRTFEK-ALRHQEEFGSE----AV-PLERVAEARVIFTCLPTTR 67 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-------TSCEEEECSSTHH-HHHHHHHHCCE----EC-CGGGGGGCSEEEECCSSHH
T ss_pred CCeEEEEcccHHHHHHHHHHhC-------CCeEEEEeCCHHH-HHHHHHCCCcc----cC-HHHHHhCCCEEEEeCCChH
Confidence 5789999999999999999853 5678777665443 34444446653 33 6788899999999999776
Q ss_pred -HHHHHHHHHhcCCCCcEEEEeccch---hhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeec
Q 014863 191 -QADNYEKIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (417)
Q Consensus 191 -~~~Vl~eI~p~Lk~GaiL~~a~G~~---i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~ 266 (417)
..++++++.+.+++|++|++.+... ...+.+ .....++.++.. |..+++. .... |...+++ .
T Consensus 68 ~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~--~~~~~g~~~~~~-p~~~~~~---~~~~-------g~~~~~~-~ 133 (289)
T 2cvz_A 68 EVYEVAEALYPYLREGTYWVDATSGEPEASRRLAE--RLREKGVTYLDA-PVSGGTS---GAEA-------GTLTVML-G 133 (289)
T ss_dssp HHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHH--HHHTTTEEEEEC-CEESHHH---HHHH-------TCEEEEE-E
T ss_pred HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEEe-cCCCChh---HHhh-------CCeEEEE-C
Confidence 5678888999999999887665433 222322 111236677775 8655443 2223 3444343 3
Q ss_pred CCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH----HHHHHHHH---HHHcCCCHHHHHHHHH
Q 014863 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRR---FTENGMNEDLAYKNTV 339 (417)
Q Consensus 267 qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a----~iea~~~~---~v~~Gl~~e~A~~~~~ 339 (417)
. +.+..+.+..++ .+|.. ++.. .+. +....+..+.++ ++.++.|. +.+.|+++++++..+.
T Consensus 134 ~--~~~~~~~~~~ll-~~g~~-~~~~---~~~-----~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 201 (289)
T 2cvz_A 134 G--PEEAVERVRPFL-AYAKK-VVHV---GPV-----GAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVIN 201 (289)
T ss_dssp S--CHHHHHHHGGGC-TTEEE-EEEE---EST-----THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred C--CHHHHHHHHHHH-hhcCC-eEEc---CCC-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHH
Confidence 2 578888899999 99853 2211 111 111112222222 34555555 8999999998887766
Q ss_pred HHH
Q 014863 340 ECI 342 (417)
Q Consensus 340 ~~l 342 (417)
++.
T Consensus 202 ~~~ 204 (289)
T 2cvz_A 202 ASS 204 (289)
T ss_dssp TST
T ss_pred ccC
Confidence 544
No 51
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.39 E-value=1.5e-12 Score=128.25 Aligned_cols=182 Identities=14% Similarity=0.067 Sum_probs=118.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcC-----------ceecCCCcCCHHhhhccCC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-----------FTEENGTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G-----------~~~~d~~~~~~~Eav~~AD 180 (417)
+||+|||+|+||.++|.+|.++ |++|.+++|..++ .+...+.| +.. ..++++ ++++|
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~------G~~V~~~~r~~~~-~~~l~~~g~~~~~~~~~~~~~~----~~~~~~-~~~aD 82 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN------GEEVILWARRKEI-VDLINVSHTSPYVEESKITVRA----TNDLEE-IKKED 82 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHH-HHHHHHHSCBTTBTTCCCCSEE----ESCGGG-CCTTE
T ss_pred CcEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCHHH-HHHHHHhCCcccCCCCeeeEEE----eCCHHH-hcCCC
Confidence 7999999999999999999999 9999888776443 33334445 232 456778 89999
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe-ccchhhh-------hhccccCCCCCCcEEEeccCCchhhHHHHHhhcc
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS-HGFLLGH-------LQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK 252 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a-~G~~i~~-------~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~ 252 (417)
+||++||+++..++++++.+ ++++|+.+ .|+.... +.+ .++ ....++.+|+.+...
T Consensus 83 vVil~vk~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~---~~~-~~~~~~~~P~~~~~~--------- 146 (335)
T 1z82_A 83 ILVIAIPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEE---ILG-CPYAVLSGPSHAEEV--------- 146 (335)
T ss_dssp EEEECSCGGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHH---HTC-CCEEEEESSCCHHHH---------
T ss_pred EEEEECCHHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHH---HcC-CceEEEECCccHHHH---------
Confidence 99999999888899987766 67776644 4765321 111 123 224788999997665
Q ss_pred cccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccc-------------ccc----------c
Q 014863 253 EINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGE-------------RGI----------L 309 (417)
Q Consensus 253 e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfge-------------qtv----------L 309 (417)
+.|.+..+....+ + .+.+..++...|....+. + |+++. .++ +
T Consensus 147 ---~~g~~~~~~~g~~-~---~~~~~~ll~~~g~~~~~~-----~---di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~ 211 (335)
T 1z82_A 147 ---AKKLPTAVTLAGE-N---SKELQKRISTEYFRVYTC-----E---DVVGVEIAGALKNVIAIAAGILDGFGGWDNAK 211 (335)
T ss_dssp ---HTTCCEEEEEEET-T---HHHHHHHHCCSSEEEEEE-----S---CHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred ---hCCCceEEEEEeh-h---HHHHHHHhCCCCEEEEec-----C---chHHHHHHHHHHhHHHHHHHHHhcCCCCchhH
Confidence 2455433333322 1 567778888877531111 1 21110 001 1
Q ss_pred cchHHHHHHHHHHHHHHcCCCHHHHHH
Q 014863 310 LGAVHGIVESLFRRFTENGMNEDLAYK 336 (417)
Q Consensus 310 ~G~~~a~iea~~~~~v~~Gl~~e~A~~ 336 (417)
......++..+.+.+.+.|++++..+.
T Consensus 212 ~a~~~~~~~E~~~la~a~G~~~~~~~~ 238 (335)
T 1z82_A 212 AALETRGIYEIARFGMFFGADQKTFMG 238 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhhcc
Confidence 122223666688889999999987654
No 52
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.39 E-value=3.5e-12 Score=125.58 Aligned_cols=187 Identities=15% Similarity=0.043 Sum_probs=116.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-ceEEEEecCCc------hhHHHHHHcCceecCCCcC-CHHhhhccCCeEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGS------RSFAEARAAGFTEENGTLG-DIYETISGSDLVL 183 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-~~Vivg~r~~~------~s~~~A~~~G~~~~d~~~~-~~~Eav~~ADiVi 183 (417)
+||+|||+|+||.++|++|.+. | ++|+++++... ...+.+.+.|+ . . +++|++++||+||
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~------G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~-----~~s~~e~~~~aDvVi 92 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR------NAARLAAYDLRFNDPAASGALRARAAELGV-E-----PLDDVAGIACADVVL 92 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECGGGGCTTTHHHHHHHHHHTTC-E-----EESSGGGGGGCSEEE
T ss_pred CeEEEECccHHHHHHHHHHHHc------CCCeEEEEeCCCccccchHHHHHHHHHCCC-C-----CCCHHHHHhcCCEEE
Confidence 7999999999999999999999 9 89888777631 33445555666 2 4 6789999999999
Q ss_pred EeecchhHHHHHHHHHhcCCCCcEEEEeccchhh---hhhccccCCCCCCcEEEecc-CCchhhHHHHHhhcccccCCCc
Q 014863 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCP-KGMGPSVRRLYVQGKEINGAGI 259 (417)
Q Consensus 184 Lavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~---~~~~~~i~~~~di~VI~v~P-n~pg~~vr~ly~~G~e~~G~Gv 259 (417)
+++|+....++++++.+.+++|++|++.++.... .+.+ .....++.++- +| .+|... ..| -
T Consensus 93 ~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~--~l~~~g~~~~d-~pv~g~~~a-----~~g-------~ 157 (317)
T 4ezb_A 93 SLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAG--AIATGKGSFVE-GAVMARVPP-----YAE-------K 157 (317)
T ss_dssp ECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHH--HHHTSSCEEEE-EEECSCSTT-----TGG-------G
T ss_pred EecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEe-ccCCCCchh-----hcC-------C
Confidence 9999999999889999999999999988776422 2221 01123455543 23 112111 022 2
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHhCCCcccccch-hhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHH
Q 014863 260 NSSFAVHQDVDGRATNVALGWSVALGSPFTFATTL-EQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNED 332 (417)
Q Consensus 260 ~~liav~qd~sgea~e~a~al~~aiG~~~~iett~-~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e 332 (417)
..+++...+ . +.+..++..+|.. ++...- ...-..--+...+.+ ...-+++.-++..+.+.|++++
T Consensus 158 l~i~vgg~~----~-~~~~~ll~~~g~~-v~~~g~~~g~a~~~Kl~~N~~~-~~~~~~~~E~~~la~~~Gid~~ 224 (317)
T 4ezb_A 158 VPILVAGRR----A-VEVAERLNALGMN-LEAVGETPGQASSLKMIRSVMI-KGVEALLIEALSSAERAGVTER 224 (317)
T ss_dssp SEEEEESTT----H-HHHHHHHHTTTCE-EEEEESSTTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTTCHHH
T ss_pred EEEEEeCCh----H-HHHHHHHHHhCCC-eEEeCCCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHH
Confidence 333443332 1 7888999999863 222210 000001112222222 2222234445678889999994
No 53
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.39 E-value=4e-12 Score=124.99 Aligned_cols=198 Identities=16% Similarity=0.096 Sum_probs=125.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch-h
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~-a 190 (417)
+||+|||+|.||.++|++|.+. |++|++++|. ....+...+.|+.. ..+++|+++++|+||+++|+. .
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~-~~~~~~l~~~g~~~----~~~~~e~~~~aDvVi~~vp~~~~ 100 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA------GYALQVWNRT-PARAASLAALGATI----HEQARAAARDADIVVSMLENGAV 100 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTTCEE----ESSHHHHHTTCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHhC------CCeEEEEcCC-HHHHHHHHHCCCEe----eCCHHHHHhcCCEEEEECCCHHH
Confidence 8999999999999999999999 9998877665 44455666668775 578999999999999999965 5
Q ss_pred HHHHHH--HHHhcCCCCcEEEEeccchhh---hhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEee
Q 014863 191 QADNYE--KIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (417)
Q Consensus 191 ~~~Vl~--eI~p~Lk~GaiL~~a~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav 265 (417)
..+++. ++.+.+++|++|++....... .+.. .....++.++. +|-..+.. .-.. |...++ +
T Consensus 101 ~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~---~a~~-------g~l~i~-~ 166 (320)
T 4dll_A 101 VQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAA--RLGALGIAHLD-TPVSGGTV---GAEQ-------GTLVIM-A 166 (320)
T ss_dssp HHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEE-CCEECHHH---HHHH-------TCEEEE-E
T ss_pred HHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHH--HHHHcCCEEEe-CCCcCCHh---HHhc-------CCeeEE-e
Confidence 567887 788999999999988765432 1111 01123566665 36333222 1122 233333 3
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 014863 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTV 339 (417)
Q Consensus 266 ~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~ 339 (417)
.. +.++.+.+..++..+ .. ++...-...-..--+-... +.+..-+++.-++..+.+.|+++++.+....
T Consensus 167 gg--~~~~~~~~~~ll~~~-~~-~~~~g~~g~a~~~Kl~~N~-~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~ 235 (320)
T 4dll_A 167 GG--KPADFERSLPLLKVF-GR-ATHVGPHGSGQLTKLANQM-IVGITIGAVAEALLFATKGGADMAKVKEAIT 235 (320)
T ss_dssp ES--CHHHHHHHHHHHHHH-EE-EEEEESTTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHTSCCHHHHHHHHT
T ss_pred CC--CHHHHHHHHHHHHhc-CC-EEEeCCccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 33 578899999999999 42 2222100000000011111 1111112333455667899999998877543
No 54
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.38 E-value=6.8e-12 Score=120.65 Aligned_cols=199 Identities=14% Similarity=0.083 Sum_probs=123.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh-
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a- 190 (417)
+||+|||+|.||.+++.+|.+. |++|.++++. ....+...+.|+.. ..+++++++++|+|++++|...
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~vp~~~~ 73 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE------GVTVYAFDLM-EANVAAVVAQGAQA----CENNQKVAAASDIIFTSLPNAGI 73 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHTTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCeEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhCCCEEEEECCCHHH
Confidence 7999999999999999999998 9988776655 33444555557764 5688899999999999998655
Q ss_pred HHHHHH---HHHhcCCCCcEEEEe-ccc--hhhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEe
Q 014863 191 QADNYE---KIFSCMKPNSILGLS-HGF--LLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 191 ~~~Vl~---eI~p~Lk~GaiL~~a-~G~--~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~lia 264 (417)
...++. ++.+.+++|++|++. .|. ....+.+ .....++.++. +|..++.. .+.. |...+++
T Consensus 74 ~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~--~~~~~g~~~~~-~p~~~~~~---~a~~-------g~~~~~~ 140 (301)
T 3cky_A 74 VETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAK--VAAEKGIDYVD-APVSGGTK---GAEA-------GTLTIMV 140 (301)
T ss_dssp HHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHH--HHHHTTCEEEE-CCEESHHH---HHHH-------TCEEEEE
T ss_pred HHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEE-ccCCCCHH---HHHc-------CCeEEEE
Confidence 567775 788999999987754 454 2333332 01113556664 57554442 2233 3433343
Q ss_pred ecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhc---ccccccccchHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 014863 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDI---FGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVEC 341 (417)
Q Consensus 265 v~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dl---fgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~~ 341 (417)
.. +.+..+.+..++..+|..... . .+..... +............+.| ++..+.+.|+++++++....++
T Consensus 141 -~g--~~~~~~~v~~ll~~~g~~~~~-~---~~~g~~~~~Kl~~N~~~~~~~~~~~E-a~~l~~~~G~~~~~~~~~~~~~ 212 (301)
T 3cky_A 141 -GA--SEAVFEKIQPVLSVIGKDIYH-V---GDTGAGDAVKIVNNLLLGCNMASLAE-ALVLGVKCGLKPETMQEIIGKS 212 (301)
T ss_dssp -ES--CHHHHHHHHHHHHHHEEEEEE-E---ESTTHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTTCCHHHHHHHHHTS
T ss_pred -CC--CHHHHHHHHHHHHHhcCCEEE-e---CCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHcC
Confidence 33 678889999999999964111 1 0100000 0000000001111223 2333899999999888766654
Q ss_pred H
Q 014863 342 I 342 (417)
Q Consensus 342 l 342 (417)
.
T Consensus 213 ~ 213 (301)
T 3cky_A 213 S 213 (301)
T ss_dssp T
T ss_pred C
Confidence 4
No 55
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.38 E-value=9.9e-12 Score=124.28 Aligned_cols=155 Identities=11% Similarity=0.019 Sum_probs=106.8
Q ss_pred cccCC-CCEEEEEcccchHHHHHHHHHhhhhhhcCC-------ceEEEEecCCc----hhHHHHHHc-------------
Q 014863 106 DAFNG-INQIGVIGWGSQGPAQAQNLRDSLAEAKSD-------IVVKVGLRKGS----RSFAEARAA------------- 160 (417)
Q Consensus 106 ~~l~g-~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-------~~Vivg~r~~~----~s~~~A~~~------------- 160 (417)
...++ |+||+|||+|+||.++|.+|.++ | ++|.+++|... +..+...+.
T Consensus 15 ~~~~~~~~kI~iIGaG~mG~alA~~L~~~------G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 88 (375)
T 1yj8_A 15 DKLKDGPLKISILGSGNWASAISKVVGTN------AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLP 88 (375)
T ss_dssp HHHHHSCBCEEEECCSHHHHHHHHHHHHH------HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCC
T ss_pred hcCccCCCEEEEECcCHHHHHHHHHHHHc------CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCc
Confidence 33344 36899999999999999999998 8 88888877644 023332222
Q ss_pred -CceecCCCcCCHHhhhccCCeEEEeecchhHHHHHHHHHh----cCCCCcEEEEec-cchhh---------hhhccccC
Q 014863 161 -GFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFS----CMKPNSILGLSH-GFLLG---------HLQSMGLD 225 (417)
Q Consensus 161 -G~~~~d~~~~~~~Eav~~ADiViLavpd~a~~~Vl~eI~p----~Lk~GaiL~~a~-G~~i~---------~~~~~~i~ 225 (417)
++.. ..+++++++++|+||++||++...+++++|.+ +++++++|+.+. |+... .+.+ .
T Consensus 89 ~~i~~----~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~---~ 161 (375)
T 1yj8_A 89 HNIVA----HSDLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISD---F 161 (375)
T ss_dssp TTEEE----ESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHH---H
T ss_pred CCeEE----ECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHH---H
Confidence 2222 35677889999999999999988999999999 999999876544 76431 1222 1
Q ss_pred CCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 226 FPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 226 ~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
++.+ -.++.+|+.+... +.|.+..+.+.. .+.+..+.+..++...|..
T Consensus 162 ~~~~-~~v~~gp~~a~~v------------~~g~~~~~~~~~-~~~~~~~~v~~ll~~~g~~ 209 (375)
T 1yj8_A 162 LNIP-CSALSGANIAMDV------------AMENFSEATIGG-NDKDSLVIWQRVFDLPYFK 209 (375)
T ss_dssp SSSC-EEEEECSCCHHHH------------HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEE
T ss_pred cCCC-EEEEeCCchHHHH------------HhCCCeEEEEec-CCHHHHHHHHHHhCCCCeE
Confidence 2322 3578899887544 245555444332 3567888888999888853
No 56
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.38 E-value=1e-11 Score=122.17 Aligned_cols=149 Identities=9% Similarity=0.029 Sum_probs=105.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-------ceEEEEecCCch----hHHHHHHcC--------------ceecC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-------IVVKVGLRKGSR----SFAEARAAG--------------FTEEN 166 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-------~~Vivg~r~~~~----s~~~A~~~G--------------~~~~d 166 (417)
+||+|||+|+||.++|.+|.++ | ++|.+++|.... ..+...+.+ +..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~------g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-- 80 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN------AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA-- 80 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE--
T ss_pred CeEEEECCCHHHHHHHHHHHhc------CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE--
Confidence 6999999999999999999998 8 788887776440 233333221 221
Q ss_pred CCcCCHHhhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEE-Eeccchh---------hhhhccccCCCCCCcEEEec
Q 014863 167 GTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL---------GHLQSMGLDFPKNIGVIAVC 236 (417)
Q Consensus 167 ~~~~~~~Eav~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~-~a~G~~i---------~~~~~~~i~~~~di~VI~v~ 236 (417)
..+++++++++|+||+++|++...+++++|.++++++++|+ .+.|+.+ ..+.+ .++.+ ..++.+
T Consensus 81 --~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~---~~~~~-~~v~~g 154 (354)
T 1x0v_A 81 --VPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGE---RLGIP-MSVLMG 154 (354)
T ss_dssp --ESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHH---HHTCC-EEEEEC
T ss_pred --EcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHH---HcCCC-EEEEEC
Confidence 35778889999999999999998999999999999998766 4456642 11222 12312 467899
Q ss_pred cCCchhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 237 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 237 Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
|+.+... +.|.+..+.+. ..+.+..+.+..++...|..
T Consensus 155 p~~a~~v------------~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~ 192 (354)
T 1x0v_A 155 ANIASEV------------ADEKFCETTIG-CKDPAQGQLLKELMQTPNFR 192 (354)
T ss_dssp SCCHHHH------------HTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEE
T ss_pred CCcHHHH------------HhcCCceEEEE-ECCHHHHHHHHHHhCCCCEE
Confidence 9987654 24555444443 34567888889999988853
No 57
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.37 E-value=8.7e-12 Score=125.49 Aligned_cols=151 Identities=17% Similarity=0.123 Sum_probs=108.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccC---CeEE
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGS---DLVL 183 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~A---DiVi 183 (417)
-+++ +||+|||+|+||.++|++|.+. |++|++++|. ....+.+.+.|+.. ..+++|+++++ |+||
T Consensus 19 Mm~~-mkIgiIGlG~mG~~~A~~L~~~------G~~V~v~dr~-~~~~~~l~~~g~~~----~~s~~e~~~~a~~~DvVi 86 (358)
T 4e21_A 19 YFQS-MQIGMIGLGRMGADMVRRLRKG------GHECVVYDLN-VNAVQALEREGIAG----ARSIEEFCAKLVKPRVVW 86 (358)
T ss_dssp ---C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTTCBC----CSSHHHHHHHSCSSCEEE
T ss_pred hhcC-CEEEEECchHHHHHHHHHHHhC------CCEEEEEeCC-HHHHHHHHHCCCEE----eCCHHHHHhcCCCCCEEE
Confidence 3455 8999999999999999999999 9998877665 44456666778774 57899999999 9999
Q ss_pred EeecchhHHHHHHHHHhcCCCCcEEEEeccchhh---hhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCce
Q 014863 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGIN 260 (417)
Q Consensus 184 Lavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~---~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~ 260 (417)
+++|+....++++++.+.+++|++|++.+..... .+.+ .....++.++-. |-.-+.. .-+. |.
T Consensus 87 ~~vp~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~--~l~~~g~~~vda-pVsGg~~---~a~~-------G~- 152 (358)
T 4e21_A 87 LMVPAAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRAD--QMRAQGITYVDV-GTSGGIF---GLER-------GY- 152 (358)
T ss_dssp ECSCGGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHH--HHHTTTCEEEEE-EEECGGG---HHHH-------CC-
T ss_pred EeCCHHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHH--HHHHCCCEEEeC-CCCCCHH---HHhc-------CC-
Confidence 9999997778999999999999999988765421 1211 122346666643 4211111 1122 33
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHhCC
Q 014863 261 SSFAVHQDVDGRATNVALGWSVALGS 286 (417)
Q Consensus 261 ~liav~qd~sgea~e~a~al~~aiG~ 286 (417)
+ |.+.. +.++.+.++.++..+|.
T Consensus 153 ~-im~GG--~~~a~~~~~~ll~~lg~ 175 (358)
T 4e21_A 153 C-LMIGG--EKQAVERLDPVFRTLAP 175 (358)
T ss_dssp E-EEEES--CHHHHHHTHHHHHHHSC
T ss_pred e-eeecC--CHHHHHHHHHHHHHhcc
Confidence 3 33444 46899999999999994
No 58
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.37 E-value=4e-13 Score=141.53 Aligned_cols=170 Identities=18% Similarity=0.147 Sum_probs=122.6
Q ss_pred hhhhccCcccccc-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCc
Q 014863 91 EYIVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (417)
Q Consensus 91 e~~~~~g~~~f~~-~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~ 169 (417)
...+|+|+|.... ....+.| ++|||||+|+||.++|++|+.. |++|+++++.. +.+.+.+.|+..
T Consensus 122 ~~~~~~g~w~~~~~~~~~l~g-~~vgIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~--~~~~a~~~g~~~----- 187 (529)
T 1ygy_A 122 DASLREHTWKRSSFSGTEIFG-KTVGVVGLGRIGQLVAQRIAAF------GAYVVAYDPYV--SPARAAQLGIEL----- 187 (529)
T ss_dssp HHHHHTTCCCGGGCCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECTTS--CHHHHHHHTCEE-----
T ss_pred HHHHHhCCCcccCcCccccCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEECCCC--ChhHHHhcCcEE-----
Confidence 3456788896432 2367999 9999999999999999999998 99987766543 345577778874
Q ss_pred CCHHhhhccCCeEEEeecch-hHHHHHHH-HHhcCCCCcEEEEec-cchh------hhhhccccCCCCCCcEEEeccCCc
Q 014863 170 GDIYETISGSDLVLLLISDA-AQADNYEK-IFSCMKPNSILGLSH-GFLL------GHLQSMGLDFPKNIGVIAVCPKGM 240 (417)
Q Consensus 170 ~~~~Eav~~ADiViLavpd~-a~~~Vl~e-I~p~Lk~GaiL~~a~-G~~i------~~~~~~~i~~~~di~VI~v~Pn~p 240 (417)
.+.++++++||+|++++|+. ....++.+ +.+.||+|++|++++ |-.+ ..+.+..+ -...+||+..||. +
T Consensus 188 ~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i-~ga~lDv~~~eP~-~ 265 (529)
T 1ygy_A 188 LSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHV-RAAGLDVFATEPC-T 265 (529)
T ss_dssp CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSE-EEEEESSCSSSSC-S
T ss_pred cCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCc-cEEEEeeccCCCC-C
Confidence 38899999999999999988 55677764 889999999998765 3211 11111000 0124678888884 2
Q ss_pred hhhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHH-----HHHHHHHhCCC
Q 014863 241 GPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV-----ALGWSVALGSP 287 (417)
Q Consensus 241 g~~vr~ly~~G~e~~G~Gv~~liav~qd-~sgea~e~-----a~al~~aiG~~ 287 (417)
.+ .+|+ +-+++++||.. .+.++.+. +..++..+++.
T Consensus 266 ~~---~L~~--------~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~ 307 (529)
T 1ygy_A 266 DS---PLFE--------LAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGE 307 (529)
T ss_dssp CC---GGGG--------CTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTC
T ss_pred Cc---hHHh--------CCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 21 2343 36888999998 67787775 77888888875
No 59
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.37 E-value=4.4e-12 Score=119.97 Aligned_cols=185 Identities=16% Similarity=0.132 Sum_probs=112.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecC-CchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~-~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a 190 (417)
|||+|||+|+||.++|.+|.+. |++|++.++. ..+..+...+.|+. .+++++++++|+||+++|+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~------g~~V~~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~aDvvi~~v~~~~ 68 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR------GVEVVTSLEGRSPSTIERARTVGVT------ETSEEDVYSCPVVISAVTPGV 68 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT------TCEEEECCTTCCHHHHHHHHHHTCE------ECCHHHHHTSSEEEECSCGGG
T ss_pred CeEEEEechHHHHHHHHHHHHC------CCeEEEeCCccCHHHHHHHHHCCCc------CCHHHHHhcCCEEEEECCCHH
Confidence 5899999999999999999999 9988775442 23344555555664 356788999999999999998
Q ss_pred HHHHHHHHHhcCCCCcEEEEeccchh---hhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEEeecC
Q 014863 191 QADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (417)
Q Consensus 191 ~~~Vl~eI~p~Lk~GaiL~~a~G~~i---~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~q 267 (417)
+.+.+.++.+.+++ +|++..+... ..+.+ .+++. .++. +|-..++. ... .|.+ +++...
T Consensus 69 ~~~~~~~~~~~~~~--~vi~~s~~~~~~~~~l~~---~~~~~-g~~~-~~v~~~~~---~~~-------~g~~-~~~~g~ 130 (264)
T 1i36_A 69 ALGAARRAGRHVRG--IYVDINNISPETVRMASS---LIEKG-GFVD-AAIMGSVR---RKG-------ADIR-IIASGR 130 (264)
T ss_dssp HHHHHHHHHTTCCS--EEEECSCCCHHHHHHHHH---HCSSS-EEEE-EEECSCHH---HHG-------GGCE-EEEEST
T ss_pred HHHHHHHHHHhcCc--EEEEccCCCHHHHHHHHH---HHhhC-Ceee-eeeeCCcc---ccc-------cCCe-EEecCC
Confidence 87777888888877 7777776642 23333 23321 1332 34221111 111 3455 444333
Q ss_pred CCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH----HHHHHHHH---HHHcCCCHHHHHHHHHH
Q 014863 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG----IVESLFRR---FTENGMNEDLAYKNTVE 340 (417)
Q Consensus 268 d~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a----~iea~~~~---~v~~Gl~~e~A~~~~~~ 340 (417)
+ . +.+.. +..+|.. ++.. .+ + ++....+-.+.++ ++.++.|. +++.|++++ ++....+
T Consensus 131 ~---~--~~~~~-l~~~g~~-~~~~---~~---~-~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~ 195 (264)
T 1i36_A 131 D---A--EEFMK-LNRYGLN-IEVR---GR---E-PGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEY 195 (264)
T ss_dssp T---H--HHHHG-GGGGTCE-EEEC---SS---S-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHT
T ss_pred c---H--HHhhh-HHHcCCe-eEEC---CC---C-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHH
Confidence 2 1 66677 8889853 2211 11 1 2222222222222 34444444 899999986 7765554
Q ss_pred H
Q 014863 341 C 341 (417)
Q Consensus 341 ~ 341 (417)
+
T Consensus 196 ~ 196 (264)
T 1i36_A 196 T 196 (264)
T ss_dssp T
T ss_pred h
Confidence 3
No 60
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.36 E-value=7.3e-12 Score=119.89 Aligned_cols=197 Identities=12% Similarity=0.051 Sum_probs=122.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a 190 (417)
|+||+|||+|.||.++|.+|.+. |++|++++ + ....+...+.|+.. ..+++++++++|+|++++|+..
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~-~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~vp~~~ 70 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA------GHQLHVTT-I-GPVADELLSLGAVN----VETARQVTEFADIIFIMVPDTP 70 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT------TCEEEECC-S-SCCCHHHHTTTCBC----CSSHHHHHHTCSEEEECCSSHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCEEEEEc-C-HHHHHHHHHcCCcc----cCCHHHHHhcCCEEEEECCCHH
Confidence 47999999999999999999998 99887665 4 33344455557664 5688899999999999998877
Q ss_pred H-HHHHH---HHHhcCCCCcEEEEeccch---hhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEEE
Q 014863 191 Q-ADNYE---KIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (417)
Q Consensus 191 ~-~~Vl~---eI~p~Lk~GaiL~~a~G~~---i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~li 263 (417)
+ ..++. ++.+.+++|++|++..... ...+.+ .....++.++ -+|...++. .... |...++
T Consensus 71 ~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~--~~~~~g~~~~-~~p~~~~~~---~a~~-------g~~~~~ 137 (295)
T 1yb4_A 71 QVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQ--RVNEMGADYL-DAPVSGGEI---GARE-------GTLSIM 137 (295)
T ss_dssp HHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHH--HHHTTTEEEE-ECCEESHHH---HHHH-------TCEEEE
T ss_pred HHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEE-EccCCCCHH---HHHc-------CCeEEE
Confidence 4 57887 7888999999887655432 222322 0111244554 235333321 2222 343433
Q ss_pred eecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccc-cccchHHH-HHHHHHHH---HHHcCCCHHHHHHHH
Q 014863 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG-ILLGAVHG-IVESLFRR---FTENGMNEDLAYKNT 338 (417)
Q Consensus 264 av~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqt-vL~G~~~a-~iea~~~~---~v~~Gl~~e~A~~~~ 338 (417)
+ .. +.+..+.+..++..+|.. ++.. .+..... .. .+.....+ ++.++.|. +.+.|+++++++...
T Consensus 138 ~-~~--~~~~~~~~~~ll~~~g~~-~~~~---~~~~~~~---~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~ 207 (295)
T 1yb4_A 138 V-GG--EQKVFDRVKPLFDILGKN-ITLV---GGNGDGQ---TCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQAL 207 (295)
T ss_dssp E-ES--CHHHHHHHHHHHHHHEEE-EEEE---ESTTHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred E-CC--CHHHHHHHHHHHHHhcCC-EEEe---CCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3 33 678889999999999963 1111 1111110 00 01111222 33344444 899999999888766
Q ss_pred HHHH
Q 014863 339 VECI 342 (417)
Q Consensus 339 ~~~l 342 (417)
.++.
T Consensus 208 ~~~~ 211 (295)
T 1yb4_A 208 MGGF 211 (295)
T ss_dssp TSSS
T ss_pred HcCC
Confidence 5544
No 61
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.33 E-value=2.6e-12 Score=126.91 Aligned_cols=162 Identities=15% Similarity=0.079 Sum_probs=112.6
Q ss_pred hhhhccCcccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcC
Q 014863 91 EYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (417)
Q Consensus 91 e~~~~~g~~~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~ 170 (417)
...+|+|+|.... ...+.| ++|||||+|+||.++|+.|+.. |++|+++++...+ ..+.+.|+.. .
T Consensus 124 ~~~~~~g~w~~~~-~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~-----~ 188 (313)
T 2ekl_A 124 MALAKSGIFKKIE-GLELAG-KTIGIVGFGRIGTKVGIIANAM------GMKVLAYDILDIR--EKAEKINAKA-----V 188 (313)
T ss_dssp HHHHHTTCCCCCC-CCCCTT-CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHTTCEE-----C
T ss_pred HHHHHcCCCCCCC-CCCCCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCcch--hHHHhcCcee-----c
Confidence 4457788996333 368999 9999999999999999999998 9998777665433 3466778773 4
Q ss_pred CHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEeccchh-------hhhhccccCCCCCCcEEEeccCCch
Q 014863 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFLL-------GHLQSMGLDFPKNIGVIAVCPKGMG 241 (417)
Q Consensus 171 ~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~G~~i-------~~~~~~~i~~~~di~VI~v~Pn~pg 241 (417)
+.++++++||+|++++|.... ..++ ++..+.||+|++|+.++--.+ ..+.+..+ -...+||+..+|.. .
T Consensus 189 ~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i-~ga~lDv~~~eP~~-~ 266 (313)
T 2ekl_A 189 SLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKV-YAYATDVFWNEPPK-E 266 (313)
T ss_dssp CHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCE-EEEEESCCSSSSCC-S
T ss_pred CHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCC-cEEEEecCCCCCCC-C
Confidence 889999999999999997664 4566 467788999999886653221 11222111 11245788888854 3
Q ss_pred hhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHHH
Q 014863 242 PSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVA 277 (417)
Q Consensus 242 ~~vr~ly~~G~e~~G~Gv~~liav~qd-~sgea~e~a 277 (417)
.....+|.. -+.+++||.. .|.++.+..
T Consensus 267 ~~~~~L~~~--------~nviltPH~~~~t~~~~~~~ 295 (313)
T 2ekl_A 267 EWELELLKH--------ERVIVTTHIGAQTKEAQKRV 295 (313)
T ss_dssp HHHHHHHHS--------TTEEECCSCTTCSHHHHHHH
T ss_pred cccchHhhC--------CCEEECCccCcCcHHHHHHH
Confidence 333356653 6788999874 444554443
No 62
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.32 E-value=1.8e-11 Score=127.26 Aligned_cols=149 Identities=16% Similarity=0.116 Sum_probs=103.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcC-------ceecCCCcCCHHhhhcc---CCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-------FTEENGTLGDIYETISG---SDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G-------~~~~d~~~~~~~Eav~~---ADi 181 (417)
|||+|||+|+||.++|++|.+. |++|.+++|..++..+...+.| +.. ..+++|++++ +|+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~------G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~----~~~~~e~v~~l~~aDv 71 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK------GFKVAVFNRTYSKSEEFMKANASAPFAGNLKA----FETMEAFAASLKKPRK 71 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE----CSCHHHHHHHBCSSCE
T ss_pred CEEEEEChHHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEE----ECCHHHHHhcccCCCE
Confidence 5799999999999999999999 9998888776444333333446 443 5688888874 999
Q ss_pred EEEeecch-hHHHHHHHHHhcCCCCcEEEEec-cch--hhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCC
Q 014863 182 VLLLISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGA 257 (417)
Q Consensus 182 ViLavpd~-a~~~Vl~eI~p~Lk~GaiL~~a~-G~~--i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~ 257 (417)
||++||+. ...++++++.+++++|++|++.. |.. ...+.+ .....++.++. +|...+... ...
T Consensus 72 VilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~--~l~~~g~~~v~-~pv~gg~~~---a~~------- 138 (478)
T 1pgj_A 72 ALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQ--QLEAAGLRFLG-MGISGGEEG---ARK------- 138 (478)
T ss_dssp EEECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHH--HHHTTTCEEEE-EEEESHHHH---HHH-------
T ss_pred EEEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHH--HHHHCCCeEEE-eeccCCHHH---Hhc-------
Confidence 99999995 66789999999999999887654 442 222222 11123566664 565444431 122
Q ss_pred CceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 258 GINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 258 Gv~~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
|. .++ +.. +.++.+.+..++..+|..
T Consensus 139 g~-~i~-~gg--~~~~~~~v~~ll~~~g~~ 164 (478)
T 1pgj_A 139 GP-AFF-PGG--TLSVWEEIRPIVEAAAAK 164 (478)
T ss_dssp CC-EEE-EEE--CHHHHHHHHHHHHHHSCB
T ss_pred CC-eEe-ccC--CHHHHHHHHHHHHHhccc
Confidence 34 333 333 478899999999999964
No 63
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.31 E-value=6.9e-12 Score=130.46 Aligned_cols=191 Identities=17% Similarity=0.078 Sum_probs=122.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-----cCceecCCCcCCHHhhhc---cCCeEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----AGFTEENGTLGDIYETIS---GSDLVL 183 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-----~G~~~~d~~~~~~~Eav~---~ADiVi 183 (417)
+||+|||+|+||.++|++|.+. |++|.+++|..++ .+...+ .|+.. ..+++++++ ++|+||
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~------G~~V~v~dr~~~~-~~~l~~~~~~g~gi~~----~~~~~e~v~~l~~aDvVi 71 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVSK-VDDFLANEAKGTKVLG----AHSLEEMVSKLKKPRRII 71 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTHH-HHHHHHTTTTTSSCEE----CSSHHHHHHHBCSSCEEE
T ss_pred CeEEEEChHHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHhccccCCCeEE----eCCHHHHHhhccCCCEEE
Confidence 5899999999999999999999 9998887776444 444444 56654 568888874 899999
Q ss_pred Eeecch-hHHHHHHHHHhcCCCCcEEEEec-cch--hhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCc
Q 014863 184 LLISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGI 259 (417)
Q Consensus 184 Lavpd~-a~~~Vl~eI~p~Lk~GaiL~~a~-G~~--i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv 259 (417)
++||+. ...++++++.|++++|++|++.. |.. ...+.+ .....++.++ .+|...+... .. .|.
T Consensus 72 laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~--~l~~~g~~~v-~~pv~g~~~~---a~-------~g~ 138 (482)
T 2pgd_A 72 LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCR--DLKDKGILFV-GSGVSGGEDG---AR-------YGP 138 (482)
T ss_dssp ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEE-EEEEESHHHH---HH-------HCC
T ss_pred EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEe-CCCCCCChhh---hc-------cCC
Confidence 999996 66789999999999999888664 442 112221 1112356666 4675444331 12 234
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH-----------HHHHH---HHHHH
Q 014863 260 NSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-----------IVESL---FRRFT 325 (417)
Q Consensus 260 ~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a-----------~iea~---~~~~v 325 (417)
.++ +.. +.++.+.+..++..+|... . ..+......+. .|..+. ++.++ ++.+.
T Consensus 139 -~i~-~gg--~~e~~~~v~~ll~~~g~~v--~---d~~~~~~~~g~----~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~ 205 (482)
T 2pgd_A 139 -SLM-PGG--NKEAWPHIKAIFQGIAAKV--G---TGEPCCDWVGD----DGAGHFVKMVHNGIEYGDMQLICEAYHLMK 205 (482)
T ss_dssp -EEE-EEE--CTTTHHHHHHHHHHHSCBC--T---TSCBSCCCCEE----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -eEE-eCC--CHHHHHHHHHHHHHhhhhc--c---CCCcceEEECC----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 323 333 3578888999999999641 0 00111111111 222222 23444 44488
Q ss_pred Hc-CCCHHHHHHHHH
Q 014863 326 EN-GMNEDLAYKNTV 339 (417)
Q Consensus 326 ~~-Gl~~e~A~~~~~ 339 (417)
+. |++++++.....
T Consensus 206 ~~~G~~~~~~~~~~~ 220 (482)
T 2pgd_A 206 DVLGLGHKEMAKAFE 220 (482)
T ss_dssp HTSCCCHHHHHHHHH
T ss_pred hcCCcCHHHHHHHHH
Confidence 88 999998776654
No 64
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.97 E-value=2.1e-13 Score=126.40 Aligned_cols=151 Identities=14% Similarity=0.084 Sum_probs=104.9
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeec
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavp 187 (417)
..+ +||+|||+|+||.++|++|.+. |++|++++|... .+.....|+.. .+..++++++|+||+++|
T Consensus 17 ~~~-~~I~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~~--~~~~~~~g~~~-----~~~~~~~~~aDvVilav~ 82 (201)
T 2yjz_A 17 EKQ-GVVCIFGTGDFGKSLGLKMLQC------GYSVVFGSRNPQ--VSSLLPRGAEV-----LCYSEAASRSDVIVLAVH 82 (201)
Confidence 556 8999999999999999999998 888887776533 23333345552 377888999999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE-Eeccch--------hhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCC
Q 014863 188 DAAQADNYEKIFSCMKPNSILG-LSHGFL--------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~-~a~G~~--------i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~G 258 (417)
++...+++ ++.+ ++++++|+ .+.|+. ..+++. .++. -++|+++||+|.......-..| .
T Consensus 83 ~~~~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~---~~~~-~~vvra~~n~~a~~~~~g~l~g-----~- 150 (201)
T 2yjz_A 83 REHYDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQ---LVPG-AHVVKAFNTISAWALQSGTLDA-----S- 150 (201)
Confidence 98777777 5655 45677655 667774 244443 3444 4899999999987742111111 1
Q ss_pred ceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 259 INSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 259 v~~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
...+++ .. +.++.+.+..++..+|..
T Consensus 151 ~~~~~~-g~--~~~~~~~v~~ll~~~G~~ 176 (201)
T 2yjz_A 151 RQVFVC-GN--DSKAKDRVMDIARTLGLT 176 (201)
Confidence 123233 33 467888999999999964
No 65
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.29 E-value=5e-12 Score=121.83 Aligned_cols=209 Identities=15% Similarity=0.102 Sum_probs=122.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-ceEEEEecCCchhHHHHHH-cCceecC--CC-------cCCHHhhhccCC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARA-AGFTEEN--GT-------LGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-~~Vivg~r~~~~s~~~A~~-~G~~~~d--~~-------~~~~~Eav~~AD 180 (417)
|||+|||+|+||.++|.+|.++. ....| ++|++++| .+..+...+ .|+...+ +. ..+..+.++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~-~~~~g~~~V~~~~r--~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRA-AATDGLLEVSWIAR--GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVD 85 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHH-HHTTSSEEEEEECC--HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCc-cccCCCCCEEEEEc--HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCC
Confidence 58999999999999999997640 00004 68877776 344555555 6876421 00 013345678999
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEE-Eeccchh-hhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcc-cccCC
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK-EINGA 257 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~-~a~G~~i-~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~-e~~G~ 257 (417)
+||++||+....++++++.++++++++|+ ...|+.. ..+.+ .+|+. .+++.+|+.+..... .|. +..+.
T Consensus 86 ~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~---~l~~~-~v~~g~~~~~a~~~~----pg~~~~~~~ 157 (317)
T 2qyt_A 86 YILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIAERMRT---YLPDT-VVWKGCVYISARKSA----PGLITLEAD 157 (317)
T ss_dssp EEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTT---TSCTT-TBCEEEEEEEEEEEE----TTEEEEEEE
T ss_pred EEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHH---HCCCC-cEEEEEEEEEEEEcC----CCEEEEcCC
Confidence 99999999999999999999998888765 4678765 34443 34443 566777765443310 000 00123
Q ss_pred CceEEEeec-CCCCHHHHHHHHHHHHHhCCCcccccchhhhh-----hhhcccccccccchHHH------------HHHH
Q 014863 258 GINSSFAVH-QDVDGRATNVALGWSVALGSPFTFATTLEQEY-----RSDIFGERGILLGAVHG------------IVES 319 (417)
Q Consensus 258 Gv~~liav~-qd~sgea~e~a~al~~aiG~~~~iett~~~E~-----~~dlfgeqtvL~G~~~a------------~iea 319 (417)
|...++... ...+.+.. .+..++...|....+...+.... .--.+...++++|+.++ ++.-
T Consensus 158 g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~~~~E 236 (317)
T 2qyt_A 158 RELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLSLLEE 236 (317)
T ss_dssp EEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHHHHHH
T ss_pred CceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 333224433 33345556 77899999996421111100000 00044555666666544 2222
Q ss_pred HHHHHHHcCCCHH
Q 014863 320 LFRRFTENGMNED 332 (417)
Q Consensus 320 ~~~~~v~~Gl~~e 332 (417)
+...+.+.|++++
T Consensus 237 ~~~v~~a~G~~~~ 249 (317)
T 2qyt_A 237 VAELFRAKYGQVP 249 (317)
T ss_dssp HHHHHHHHTSCCC
T ss_pred HHHHHHHcCCCCC
Confidence 4455667788764
No 66
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.29 E-value=8.3e-12 Score=118.45 Aligned_cols=194 Identities=14% Similarity=0.102 Sum_probs=116.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc---Cc--eecCCCcCCHHhhhccCCeEEEee
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GF--TEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~---G~--~~~d~~~~~~~Eav~~ADiViLav 186 (417)
|||+|||+|+||.++|.+|.+. |++|.+++|...+..+ .... |. .. .-...+ .++++++|+||+++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~~~~~~-l~~~~~~~~~~~~-~~~~~~-~~~~~~~d~vi~~v 71 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ------GHEVQGWLRVPQPYCS-VNLVETDGSIFNE-SLTAND-PDFLATSDLLLVTL 71 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSEEE-EEEECTTSCEEEE-EEEESC-HHHHHTCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCccceee-EEEEcCCCceeee-eeeecC-ccccCCCCEEEEEe
Confidence 5899999999999999999999 9998887776432211 1111 21 00 001223 46788999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEE-Eeccchh-hhhhccccCCCC---CC---cEEEeccCCchhhHHHHHhhcccccCCC
Q 014863 187 SDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQSMGLDFPK---NI---GVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL~-~a~G~~i-~~~~~~~i~~~~---di---~VI~v~Pn~pg~~vr~ly~~G~e~~G~G 258 (417)
|+....++++++.++++++++|+ ...|+.. ..+.+ .+++ ++ ...+.+| .+... +.|
T Consensus 72 ~~~~~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~---~~~~~~~g~~~~~~~~~~p-~~~~~------------~~g 135 (291)
T 1ks9_A 72 KAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQN---IQQPLLMGTTTHAARRDGN-VIIHV------------ANG 135 (291)
T ss_dssp CGGGHHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTT---CCSCEEEEEECCEEEEETT-EEEEE------------ECC
T ss_pred cHHhHHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHH---hcCCeEEEEEeEccEEcCC-EEEEe------------ccc
Confidence 99999999999999999998765 5677754 23433 3333 11 1234455 33222 356
Q ss_pred ceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhh-----hcccccccccchH-----------HHHHHHHHH
Q 014863 259 INSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRS-----DIFGERGILLGAV-----------HGIVESLFR 322 (417)
Q Consensus 259 v~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~-----dlfgeqtvL~G~~-----------~a~iea~~~ 322 (417)
... +.+.. .+.+..+.+..++..+|....+...+...... -.++..++|+|+. ..++.-+..
T Consensus 136 ~~~-i~~~~-~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~ 213 (291)
T 1ks9_A 136 ITH-IGPAR-QQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAA 213 (291)
T ss_dssp CEE-EEESS-GGGTTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHH
T ss_pred ceE-EccCC-CCcchHHHHHHHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHH
Confidence 544 44432 23456677889999999652221111000000 0334444454432 224555666
Q ss_pred HHHHcCCCHH
Q 014863 323 RFTENGMNED 332 (417)
Q Consensus 323 ~~v~~Gl~~e 332 (417)
.+.+.|++++
T Consensus 214 va~a~G~~~~ 223 (291)
T 1ks9_A 214 VIEREGHHTS 223 (291)
T ss_dssp HHHHHTCCCC
T ss_pred HHHHcCCCCC
Confidence 7788999873
No 67
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.28 E-value=3.9e-11 Score=125.42 Aligned_cols=153 Identities=17% Similarity=0.057 Sum_probs=103.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecC-CCcCCHHhhhc---cCCeEEEee
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-GTLGDIYETIS---GSDLVLLLI 186 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d-~~~~~~~Eav~---~ADiViLav 186 (417)
+++|||||+|+||.++|++|.+. |++|++++|+.++ .+...+.|..... ....+++|+++ ++|+|+++|
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~------G~~V~v~dr~~~~-~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~V 76 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVSK-VDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLV 76 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTHH-HHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECS
T ss_pred CCEEEEEChhHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEec
Confidence 37899999999999999999999 9999888776544 4444443321000 01367888887 599999999
Q ss_pred cch-hHHHHHHHHHhcCCCCcEEEEeccchh---hhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCceEE
Q 014863 187 SDA-AQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSS 262 (417)
Q Consensus 187 pd~-a~~~Vl~eI~p~Lk~GaiL~~a~G~~i---~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~~l 262 (417)
|+. ...++++++.++|++|++|++.+.... ..+.+ .....++.++.. |-.-+.. ..+.| . +
T Consensus 77 p~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~--~l~~~Gi~fvd~-pVsGg~~---gA~~G-------~-~- 141 (484)
T 4gwg_A 77 KAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCR--DLKAKGILFVGS-GVSGGEE---GARYG-------P-S- 141 (484)
T ss_dssp CSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HHHHTTCEEEEE-EEESHHH---HHHHC-------C-E-
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHH--HHHhhccccccC-CccCCHH---HHhcC-------C-e-
Confidence 996 566899999999999999998875432 11111 011346777764 6221221 22233 3 3
Q ss_pred EeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 263 FAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 263 iav~qd~sgea~e~a~al~~aiG~~ 287 (417)
+.+.. +.++.+.++.++..+|..
T Consensus 142 im~GG--~~ea~~~v~pll~~ig~~ 164 (484)
T 4gwg_A 142 LMPGG--NKEAWPHIKTIFQGIAAK 164 (484)
T ss_dssp EEEEE--CGGGHHHHHHHHHHHSCB
T ss_pred eecCC--CHHHHHHHHHHHHHhcCc
Confidence 33454 468899999999999964
No 68
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.27 E-value=8.9e-11 Score=127.82 Aligned_cols=204 Identities=10% Similarity=0.067 Sum_probs=133.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHH-----------HHcCc-------------eecC
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-----------RAAGF-------------TEEN 166 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A-----------~~~G~-------------~~~d 166 (417)
++||+|||.|+||.+||.+|.++ |++|++++++.+ ..+.+ .+.|. ..
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~~-~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~-- 384 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK------GTPILMKDINEH-GIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP-- 384 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT------TCCEEEECSSHH-HHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE--
T ss_pred CCEEEEECCChhhHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEE--
Confidence 58999999999999999999999 999888776533 23332 22342 21
Q ss_pred CCcCCHHhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEEE-EeccchhhhhhccccCCCCCCcEEEeccCCchhh
Q 014863 167 GTLGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 167 ~~~~~~~Eav~~ADiViLavpd~a~--~~Vl~eI~p~Lk~GaiL~-~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~ 243 (417)
..++ +++++||+||+++|.... .+++.++.++++++++|+ .++++.+..+.. .....-+++..||..|...
T Consensus 385 --~~d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~---~~~~~~~~ig~hf~~P~~~ 458 (715)
T 1wdk_A 385 --TLSY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAK---ALKRPENFVGMHFFNPVHM 458 (715)
T ss_dssp --ESSS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGG---GCSCGGGEEEEECCSSTTT
T ss_pred --ECCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHH---HhcCccceEEEEccCCccc
Confidence 3455 678999999999997764 468889999999999875 566777766544 2222347999999888654
Q ss_pred HHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccch-HHH-HHHHHH
Q 014863 244 VRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGA-VHG-IVESLF 321 (417)
Q Consensus 244 vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~-~~a-~iea~~ 321 (417)
+ -...+.+....+.+..+.+..++..+|...++ . .+. .-| ++.- +.+ +.|+ .
T Consensus 459 ~--------------~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~-v---~d~--~Gf-----i~Nril~~~~~Ea-~ 512 (715)
T 1wdk_A 459 M--------------PLVEVIRGEKSSDLAVATTVAYAKKMGKNPIV-V---NDC--PGF-----LVNRVLFPYFGGF-A 512 (715)
T ss_dssp C--------------CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEE-E---ESC--TTT-----THHHHHHHHHHHH-H
T ss_pred C--------------ceEEEEECCCCCHHHHHHHHHHHHHhCCEeEE-E---cCC--CCh-----hhhHHHHHHHHHH-H
Confidence 1 12234567778899999999999999964221 1 110 111 2222 222 3444 3
Q ss_pred HHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHhcHHH
Q 014863 322 RRFTENGMNEDLAYKNTVECIT--GIISKIISTQGMLA 357 (417)
Q Consensus 322 ~~~v~~Gl~~e~A~~~~~~~l~--~~~~~li~e~G~~~ 357 (417)
.+++.|+++++..... ...- -|--.++-..|++.
T Consensus 513 -~l~~~G~~~~~id~~~-~~~G~p~Gp~~l~D~vGld~ 548 (715)
T 1wdk_A 513 -KLVSAGVDFVRIDKVM-EKFGWPMGPAYLMDVVGIDT 548 (715)
T ss_dssp -HHHHTTCCHHHHHHHH-HHHTCSSCHHHHHHHHCHHH
T ss_pred -HHHHCCCCHHHHHHHH-HHcCCCCCHHHHHHHhhHHH
Confidence 3445699998766544 2210 13345555556643
No 69
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.27 E-value=1.4e-11 Score=121.36 Aligned_cols=161 Identities=18% Similarity=0.096 Sum_probs=110.6
Q ss_pred hhhhccCccccc-ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCc
Q 014863 91 EYIVRGGRDLFN-LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (417)
Q Consensus 91 e~~~~~g~~~f~-~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~ 169 (417)
...+|+|+|... .....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+ +.+.+.|+..
T Consensus 122 ~~~~~~g~w~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~----- 187 (307)
T 1wwk_A 122 DRKMREGVWAKKEAMGIELEG-KTIGIIGFGRIGYQVAKIANAL------GMNILLYDPYPNE--ERAKEVNGKF----- 187 (307)
T ss_dssp HHHHTTTCCCTTTCCBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHTTCEE-----
T ss_pred HHHHHcCCCCccCcCCcccCC-ceEEEEccCHHHHHHHHHHHHC------CCEEEEECCCCCh--hhHhhcCccc-----
Confidence 345678888631 12368999 9999999999999999999988 9998777665433 4566778763
Q ss_pred CCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEeccch-------hhhhhccccCCCCCCcEEEeccCCc
Q 014863 170 GDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVCPKGM 240 (417)
Q Consensus 170 ~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~G~~-------i~~~~~~~i~~~~di~VI~v~Pn~p 240 (417)
.+.++++++||+|++++|.... ..++ ++..+.||+|++|+.++--. ...+.+ +.......||+..+|.-+
T Consensus 188 ~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~-g~i~ga~lDv~~~eP~~~ 266 (307)
T 1wwk_A 188 VDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKE-GWIAGAGLDVFEEEPLPK 266 (307)
T ss_dssp CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHH-TSSSEEEESCCSSSSCCT
T ss_pred cCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHh-CCCcEEEEecCCCCCCCC
Confidence 4789999999999999997664 4556 46778899999988665322 122322 111123567777788532
Q ss_pred hhhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHHH
Q 014863 241 GPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVA 277 (417)
Q Consensus 241 g~~vr~ly~~G~e~~G~Gv~~liav~qd-~sgea~e~a 277 (417)
.+ .+|+ .-+++++||.. .|.++.+..
T Consensus 267 ~~---~L~~--------~~nviltPh~~~~t~~~~~~~ 293 (307)
T 1wwk_A 267 DH---PLTK--------FDNVVLTPHIGASTVEAQERA 293 (307)
T ss_dssp TC---GGGG--------CTTEEECSSCTTCBHHHHHHH
T ss_pred CC---hHHh--------CCCEEECCccccCcHHHHHHH
Confidence 22 2333 36788999874 344554443
No 70
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.26 E-value=3.9e-12 Score=126.05 Aligned_cols=162 Identities=17% Similarity=0.135 Sum_probs=108.3
Q ss_pred hhhhccCcccc----cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEec-CCchhHHHHHHcCceec
Q 014863 91 EYIVRGGRDLF----NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFTEE 165 (417)
Q Consensus 91 e~~~~~g~~~f----~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r-~~~~s~~~A~~~G~~~~ 165 (417)
...+|+|+|.. ......+.| ++|||||+|+||.++|+.|+.. |++|+++++ ...+ ..+.+.|+..
T Consensus 123 ~~~~~~g~w~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~--~~~~~~g~~~- 192 (320)
T 1gdh_A 123 EKMIRTRSWPGWEPLELVGEKLDN-KTLGIYGFGSIGQALAKRAQGF------DMDIDYFDTHRASS--SDEASYQATF- 192 (320)
T ss_dssp HHHHHTTCCCCCCTTTTCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSCCCH--HHHHHHTCEE-
T ss_pred HHHHHcCCCCccccccccCcCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCcCh--hhhhhcCcEE-
Confidence 44567888851 112358999 9999999999999999999988 999887776 5433 3556678763
Q ss_pred CCCcCCHHhhhccCCeEEEeecchh-HHHHH-HHHHhcCCCCcEEEEec-c--ch----hhhhhccccCCCCCCcEEEec
Q 014863 166 NGTLGDIYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLSH-G--FL----LGHLQSMGLDFPKNIGVIAVC 236 (417)
Q Consensus 166 d~~~~~~~Eav~~ADiViLavpd~a-~~~Vl-~eI~p~Lk~GaiL~~a~-G--~~----i~~~~~~~i~~~~di~VI~v~ 236 (417)
..+.+|++++||+|++++|... ...++ ++..+.||+|++|+.++ | +. ...+.+..+. ....||+..+
T Consensus 193 ---~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~-gA~lDv~~~e 268 (320)
T 1gdh_A 193 ---HDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLA-YAGFDVFAGE 268 (320)
T ss_dssp ---CSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE-EEEESCCTTT
T ss_pred ---cCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCc-EEEEeCCCCC
Confidence 3478999999999999999765 34566 45788999999988664 4 11 1122221111 1245666667
Q ss_pred cCCchhhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHHHH
Q 014863 237 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVAL 278 (417)
Q Consensus 237 Pn~pg~~vr~ly~~G~e~~G~Gv~~liav~qd-~sgea~e~a~ 278 (417)
| |.. ..+|. .-+++++||.. .|.++.+...
T Consensus 269 P--~~~--~~L~~--------~~nviltPH~~~~t~~~~~~~~ 299 (320)
T 1gdh_A 269 P--NIN--EGYYD--------LPNTFLFPHIGSAATQAREDMA 299 (320)
T ss_dssp T--SCC--TTGGG--------CTTEEECSSCTTCBHHHHHHHH
T ss_pred C--CCC--Chhhh--------CCCEEECCcCCcCcHHHHHHHH
Confidence 7 211 12343 36789999874 3445544433
No 71
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.24 E-value=2.3e-11 Score=121.59 Aligned_cols=159 Identities=16% Similarity=0.060 Sum_probs=110.8
Q ss_pred hhhhccCcccccc-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCc
Q 014863 91 EYIVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (417)
Q Consensus 91 e~~~~~g~~~f~~-~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~ 169 (417)
...+|+|+|.... ....+.| ++|||||+|.||.++|+.|+.. |++|+++++...+ +.+.+.|+. .
T Consensus 145 ~~~~~~g~W~~~~~~~~~l~g-~tvgIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~-----~ 210 (335)
T 2g76_A 145 TASMKDGKWERKKFMGTELNG-KTLGILGLGRIGREVATRMQSF------GMKTIGYDPIISP--EVSASFGVQ-----Q 210 (335)
T ss_dssp HHHHHTTCCCTGGGCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSSCH--HHHHHTTCE-----E
T ss_pred HHHHHcCCCCccCCCCcCCCc-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCcch--hhhhhcCce-----e
Confidence 3456788996432 2368999 9999999999999999999988 9998776665333 456677876 3
Q ss_pred CCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEeccch-------hhhhhccccCCCCCCcEEEeccCCc
Q 014863 170 GDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVCPKGM 240 (417)
Q Consensus 170 ~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~G~~-------i~~~~~~~i~~~~di~VI~v~Pn~p 240 (417)
.+.+|++++||+|++++|.... ..++ +++++.||+|++|+.++--. ...+++..+ -...+||+..+|. +
T Consensus 211 ~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i-~gA~lDV~~~EP~-~ 288 (335)
T 2g76_A 211 LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQC-AGAALDVFTEEPP-R 288 (335)
T ss_dssp CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSE-EEEEESCCSSSSC-S
T ss_pred CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCc-cEEEEeecCCCCC-C
Confidence 4889999999999999998764 4566 46889999999998765322 122222111 1124577888883 2
Q ss_pred hhhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHH
Q 014863 241 GPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV 276 (417)
Q Consensus 241 g~~vr~ly~~G~e~~G~Gv~~liav~qd-~sgea~e~ 276 (417)
. ..+|.. -+++++||.. .+.++.+.
T Consensus 289 ~---~~L~~~--------~nvilTPH~~~~t~e~~~~ 314 (335)
T 2g76_A 289 D---RALVDH--------ENVISCPHLGASTKEAQSR 314 (335)
T ss_dssp C---CHHHHS--------TTEEECSSCTTCBHHHHHH
T ss_pred C---chHHhC--------CCEEECCcCCCCCHHHHHH
Confidence 2 245543 6788999864 44455443
No 72
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.24 E-value=4.5e-11 Score=116.81 Aligned_cols=152 Identities=20% Similarity=0.167 Sum_probs=103.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecC--C--------CcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN--G--------TLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d--~--------~~~~~~Eav~~ADi 181 (417)
+||+|||.|+||.++|..|.++ |++|.++.|.. .+...+.|+.... + ...+. +.++.+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~---~~~i~~~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~D~ 72 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS------GEDVHFLLRRD---YEAIAGNGLKVFSINGDFTLPHVKGYRAP-EEIGPMDL 72 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT------SCCEEEECSTT---HHHHHHTCEEEEETTCCEEESCCCEESCH-HHHCCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCc---HHHHHhCCCEEEcCCCeEEEeeceeecCH-HHcCCCCE
Confidence 7899999999999999999999 99988877753 3555667764311 0 01344 44789999
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEE-EEeccch-hhhhhccccCCCCCCcEEEec------cCCchhhHHHHHhhccc
Q 014863 182 VLLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFL-LGHLQSMGLDFPKNIGVIAVC------PKGMGPSVRRLYVQGKE 253 (417)
Q Consensus 182 ViLavpd~a~~~Vl~eI~p~Lk~GaiL-~~a~G~~-i~~~~~~~i~~~~di~VI~v~------Pn~pg~~vr~ly~~G~e 253 (417)
||++||+.+..++++++.|+++++++| ++..|+. ...+.+ .+|++ +++..+ -.+|+.+. .
T Consensus 73 vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~---~~~~~-~v~~~~~~~~a~~~~p~~v~-----~--- 140 (312)
T 3hn2_A 73 VLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEEALAT---LFGAE-RIIGGVAFLCSNRGEPGEVH-----H--- 140 (312)
T ss_dssp EEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHH---HTCGG-GEEEEEEEEECCBCSSSEEE-----E---
T ss_pred EEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHH---HCCCC-cEEEEEEEeeeEEcCCcEEE-----E---
Confidence 999999999999999999999998865 4678985 444544 34443 555544 24455542 1
Q ss_pred ccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 254 INGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 254 ~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
.|.|... +......+.+..+.+.+++...|..
T Consensus 141 -~~~g~~~-ig~~~~~~~~~~~~l~~~l~~~g~~ 172 (312)
T 3hn2_A 141 -LGAGRII-LGEFLPRDTGRIEELAAMFRQAGVD 172 (312)
T ss_dssp -CEEEEEE-EEESSCCCSHHHHHHHHHHHHTTCC
T ss_pred -CCCCeEE-EecCCCCccHHHHHHHHHHHhCCCC
Confidence 1234433 4443333445666777888888865
No 73
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.23 E-value=4.5e-10 Score=122.49 Aligned_cols=211 Identities=11% Similarity=0.046 Sum_probs=131.8
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-----------cCceec-------C--CCc
Q 014863 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-------N--GTL 169 (417)
Q Consensus 110 g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~-------d--~~~ 169 (417)
.|+||+|||.|.||.++|.+|.+. |++|++++++.+ ..+.+.+ .|.... + ...
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~~-~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~ 383 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILS------NYPVILKEVNEK-FLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGS 383 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHH-HHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEE
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEe
Confidence 358999999999999999999999 999888776533 3333211 232100 0 012
Q ss_pred CCHHhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEEE-EeccchhhhhhccccCCCCCCcEEEeccCCchhhHHH
Q 014863 170 GDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRR 246 (417)
Q Consensus 170 ~~~~Eav~~ADiViLavpd~a~--~~Vl~eI~p~Lk~GaiL~-~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ 246 (417)
.++ +++++||+||+++|.+.. .+++.++.++++++++|+ .++++.+..+.. .....-+++..|+--|...
T Consensus 384 ~d~-~~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~---~~~~p~~~iG~hf~~P~~~--- 456 (725)
T 2wtb_A 384 LDY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGE---RTKSQDRIVGAHFFSPAHI--- 456 (725)
T ss_dssp SSS-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTT---TCSCTTTEEEEEECSSTTT---
T ss_pred CCH-HHHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHH---HhcCCCCEEEecCCCCccc---
Confidence 345 678999999999998764 368889999999999875 456777665544 2222237899998666543
Q ss_pred HHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchH-HH-HHHHHHHHH
Q 014863 247 LYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAV-HG-IVESLFRRF 324 (417)
Q Consensus 247 ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~-~a-~iea~~~~~ 324 (417)
+-...+.+....+.+..+.+..++..+|.. .+.. .+. .-| ++.-+ .+ +.|+ . .+
T Consensus 457 -----------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~-~v~v---~d~--~Gf-----i~Nril~~~~~Ea-~-~l 512 (725)
T 2wtb_A 457 -----------MPLLEIVRTNHTSAQVIVDLLDVGKKIKKT-PVVV---GNC--TGF-----AVNRMFFPYTQAA-M-FL 512 (725)
T ss_dssp -----------CCEEEEEECSSCCHHHHHHHHHHHHHTTCE-EEEE---ESS--TTT-----THHHHHHHHHHHH-H-HH
T ss_pred -----------CceEEEEECCCCCHHHHHHHHHHHHHhCCE-EEEE---CCC--ccH-----HHHHHHHHHHHHH-H-HH
Confidence 112334557677899999999999999964 2211 110 111 22222 22 3444 3 34
Q ss_pred HHcCCCHHHHHHHHHHHHH--HHHHHHHHHhcHHHHH
Q 014863 325 TENGMNEDLAYKNTVECIT--GIISKIISTQGMLAVY 359 (417)
Q Consensus 325 v~~Gl~~e~A~~~~~~~l~--~~~~~li~e~G~~~l~ 359 (417)
++.|+++++..... ...- -|--.++-..|++..+
T Consensus 513 ~~~G~~~e~id~~~-~~~g~p~Gp~~l~D~vGld~~~ 548 (725)
T 2wtb_A 513 VECGADPYLIDRAI-SKFGMPMGPFRLCDLVGFGVAI 548 (725)
T ss_dssp HHTTCCHHHHHHHH-HHHTCSSCHHHHHHHHCHHHHH
T ss_pred HHCCCCHHHHHHHH-HHcCCCCCHHHHHHHhchHHHH
Confidence 45599998777654 3210 1334555566664444
No 74
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.22 E-value=4.5e-10 Score=116.31 Aligned_cols=209 Identities=12% Similarity=0.074 Sum_probs=131.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-----------cCceec-------CCCcCCH
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-------NGTLGDI 172 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~-------d~~~~~~ 172 (417)
++||+|||+|.||.++|..|... |++|++.+++ ....+.+.+ .|.... .....+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~------G~~V~l~D~~-~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 109 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV------GISVVAVESD-PKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST 109 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEECSS-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC------CCeEEEEECC-HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH
Confidence 58999999999999999999999 9998877665 333333322 121000 0012355
Q ss_pred HhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEEEE-eccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHHh
Q 014863 173 YETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILGL-SHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYV 249 (417)
Q Consensus 173 ~Eav~~ADiViLavpd~a~--~~Vl~eI~p~Lk~GaiL~~-a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~ 249 (417)
+++++||+||+++|.... .+++.++.++++++++|+. +.++.+..+.. .....-+++..||-.|...
T Consensus 110 -~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~la~---~~~~~~~~ig~hf~~P~~~------ 179 (463)
T 1zcj_A 110 -KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS---STDRPQLVIGTHFFSPAHV------ 179 (463)
T ss_dssp -GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTTT------
T ss_pred -HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHHHH---HhcCCcceEEeecCCCccc------
Confidence 578999999999997653 5688899999999998764 34555555543 2233347999999877543
Q ss_pred hcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH-HHHHHHHHHHHcC
Q 014863 250 QGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG-IVESLFRRFTENG 328 (417)
Q Consensus 250 ~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a-~iea~~~~~v~~G 328 (417)
+-...+.+....+.+..+.+..++..+|... +.. .+ ..-| ++.-+.. ++..++ .+++.|
T Consensus 180 --------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~-v~v---~~--~~gf-----i~Nrll~~~~~ea~-~l~~~G 239 (463)
T 1zcj_A 180 --------MRLLEVIPSRYSSPTTIATVMSLSKKIGKIG-VVV---GN--CYGF-----VGNRMLAPYYNQGF-FLLEEG 239 (463)
T ss_dssp --------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEE-EEB---CC--STTT-----THHHHHHHHHHHHH-HHHHTT
T ss_pred --------ceeEEEeCCCCCCHHHHHHHHHHHHHhCCEE-EEE---CC--CccH-----HHHHHHHHHHHHHH-HHHHcC
Confidence 1223355677788999999999999999642 111 11 1111 2222222 332233 445669
Q ss_pred CCHHHHHHHHHHHHH--HHHHHHHHHhcHHH
Q 014863 329 MNEDLAYKNTVECIT--GIISKIISTQGMLA 357 (417)
Q Consensus 329 l~~e~A~~~~~~~l~--~~~~~li~e~G~~~ 357 (417)
+++++.....- .+- -|-..+.-..|++.
T Consensus 240 ~~~~~id~~~~-~~g~p~Gp~~l~D~~GlD~ 269 (463)
T 1zcj_A 240 SKPEDVDGVLE-EFGFKMGPFRVSDLAGLDV 269 (463)
T ss_dssp CCHHHHHHHHH-HHTCSSCHHHHHHHHCHHH
T ss_pred CCHHHHHHHHH-HcCCCCcHHHHHHHcchHH
Confidence 99988665442 110 13455666667643
No 75
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.22 E-value=1.8e-11 Score=113.46 Aligned_cols=139 Identities=17% Similarity=0.145 Sum_probs=92.2
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
..+.+ +||+|||+|+||.++|..|.+. |++|++++|... +++++|+|+++
T Consensus 15 ~~~~~-~~I~iiG~G~mG~~la~~l~~~------g~~V~~~~~~~~-----------------------~~~~aD~vi~a 64 (209)
T 2raf_A 15 LYFQG-MEITIFGKGNMGQAIGHNFEIA------GHEVTYYGSKDQ-----------------------ATTLGEIVIMA 64 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCC-----------------------CSSCCSEEEEC
T ss_pred cccCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH-----------------------HhccCCEEEEc
Confidence 34566 8999999999999999999999 999887765422 35689999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEE-eccch---------------hhhhhccccCCCCCCcEEE-eccCCchhhHHHHH
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILGL-SHGFL---------------LGHLQSMGLDFPKNIGVIA-VCPKGMGPSVRRLY 248 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~~-a~G~~---------------i~~~~~~~i~~~~di~VI~-v~Pn~pg~~vr~ly 248 (417)
+|++...++++++.+.++ +++|++ +.|+. ...+++ .+| +.+++. ++|. .++.....-
T Consensus 65 v~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~---~l~-~~~vv~~~~~~-~~p~~~~~~ 138 (209)
T 2raf_A 65 VPYPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQ---QLP-DSQVLKAFNTT-FAATLQSGQ 138 (209)
T ss_dssp SCHHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHH---HCT-TSEEEECSTTS-CHHHHHHSE
T ss_pred CCcHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHH---HCC-CCcEEEeeecc-cHhhccccc
Confidence 999888999999999888 887764 45664 233433 344 467888 4442 222211100
Q ss_pred hhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 249 ~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
.. |.+... +.+.. .+.++.+.+..++..+|..
T Consensus 139 ~~-----g~~~~~-~~~~g-~~~~~~~~v~~ll~~~G~~ 170 (209)
T 2raf_A 139 VN-----GKEPTT-VLVAG-NDDSAKQRFTRALADSPLE 170 (209)
T ss_dssp ET-----TTEECE-EEEEE-SCHHHHHHHHHHTTTSSCE
T ss_pred cC-----CCCCce-eEEcC-CCHHHHHHHHHHHHHcCCc
Confidence 01 112222 22222 2568899999999999963
No 76
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.17 E-value=6.6e-11 Score=109.93 Aligned_cols=149 Identities=18% Similarity=0.178 Sum_probs=99.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchhH
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a~ 191 (417)
+||+|||+|.||.+++.+|.+. |++|++.+|+. +..+...+.|+.. .+.+++++++|+|++++|++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~------g~~V~~~~r~~-~~~~~~~~~g~~~-----~~~~~~~~~~DvVi~av~~~~~ 96 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS------GFKVVVGSRNP-KRTARLFPSAAQV-----TFQEEAVSSPEVIFVAVFREHY 96 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSH-HHHHHHSBTTSEE-----EEHHHHTTSCSEEEECSCGGGS
T ss_pred CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHcCCce-----ecHHHHHhCCCEEEECCChHHH
Confidence 7899999999999999999998 98888777653 3334444446663 3788899999999999999876
Q ss_pred HHHHHHHHhcCCCCcEEE-Eeccchhhhh----------hccccCCCCCCcEEEeccCCchhhHHHHHhhcccccCCCce
Q 014863 192 ADNYEKIFSCMKPNSILG-LSHGFLLGHL----------QSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGIN 260 (417)
Q Consensus 192 ~~Vl~eI~p~Lk~GaiL~-~a~G~~i~~~----------~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~e~~G~Gv~ 260 (417)
.++++ +.+.+ ++++|+ .+.|..+..+ .. .+| +.+|++.+ |...... ...|-. .|-+
T Consensus 97 ~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~---~l~-~~~vv~~~-n~~~~~~---~~~~~~---~g~~ 163 (215)
T 2vns_A 97 SSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLAS---LFP-TCTVVKAF-NVISAWT---LQAGPR---DGNR 163 (215)
T ss_dssp GGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHH---HCT-TSEEEEEC-TTBCHHH---HHTCSC---SSCC
T ss_pred HHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHH---HCC-CCeEEecc-ccccHhH---hccccc---CCce
Confidence 67775 66666 788766 5566654322 22 344 45788877 4432221 111110 1222
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 261 SSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 261 ~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
.++... .+.++.+.+..++..+|..
T Consensus 164 ~~~~~g--~~~~~~~~v~~ll~~~G~~ 188 (215)
T 2vns_A 164 QVPICG--DQPEAKRAVSEMALAMGFM 188 (215)
T ss_dssp EEEEEE--SCHHHHHHHHHHHHHTTCE
T ss_pred eEEEec--CCHHHHHHHHHHHHHcCCc
Confidence 222223 2678999999999999964
No 77
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.17 E-value=6.8e-11 Score=118.48 Aligned_cols=156 Identities=19% Similarity=0.224 Sum_probs=97.1
Q ss_pred hhhhccCccccc---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCC
Q 014863 91 EYIVRGGRDLFN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG 167 (417)
Q Consensus 91 e~~~~~g~~~f~---~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~ 167 (417)
+..+|+|+|... .....+.| |||||||+|+||.++|+.++.. |++|+++++...+ ..++..
T Consensus 149 ~~~~~~g~W~~~~~~~~~~~l~g-ktiGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~------~~~~~~--- 212 (340)
T 4dgs_A 149 DRLVREGRWAAGEQLPLGHSPKG-KRIGVLGLGQIGRALASRAEAF------GMSVRYWNRSTLS------GVDWIA--- 212 (340)
T ss_dssp HHHHHTTCC------CCCCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSCCT------TSCCEE---
T ss_pred HHHHhcCCcccccCcCccccccC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCccc------ccCcee---
Confidence 445778888653 11278999 9999999999999999999988 9998877765332 234443
Q ss_pred CcCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec-cch------hhhhhccccCCCCCCcEEEeccC
Q 014863 168 TLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPK 238 (417)
Q Consensus 168 ~~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~-G~~------i~~~~~~~i~~~~di~VI~v~Pn 238 (417)
..+.+|++++||+|++++|.... ..++ +++++.||+|++|+.++ |-. +..+++ +..-....||.--.|.
T Consensus 213 -~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~-g~i~gA~LDVf~~EP~ 290 (340)
T 4dgs_A 213 -HQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKS-GTIAGAGLDVFVNEPA 290 (340)
T ss_dssp -CSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC---------------CCSSEEEESCCSSSSS
T ss_pred -cCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHc-CCceEEEeCCcCCCCC
Confidence 46899999999999999996655 4566 57889999999988664 321 111221 1111234566666774
Q ss_pred CchhhHHHHHhhcccccCCCceEEEeecC-CCCHHHHHH
Q 014863 239 GMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (417)
Q Consensus 239 ~pg~~vr~ly~~G~e~~G~Gv~~liav~q-d~sgea~e~ 276 (417)
.+. .++.. -+.+++||- ..|.++.+.
T Consensus 291 ~~~----~L~~~--------~nvilTPHia~~t~e~~~~ 317 (340)
T 4dgs_A 291 IRS----EFHTT--------PNTVLMPHQGSATVETRMA 317 (340)
T ss_dssp CCS----HHHHS--------SSEEECSSCSSCCHHHHHH
T ss_pred Ccc----chhhC--------CCEEEcCcCCcCCHHHHHH
Confidence 432 34443 467888886 344454443
No 78
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.16 E-value=5.2e-11 Score=119.79 Aligned_cols=108 Identities=20% Similarity=0.204 Sum_probs=85.1
Q ss_pred hhhccCcccccc-----------cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc
Q 014863 92 YIVRGGRDLFNL-----------LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA 160 (417)
Q Consensus 92 ~~~~~g~~~f~~-----------~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~ 160 (417)
..+|+|+|.... ....+.| ++|||||+|.||.++|+.|+.. |++|+++++. ...+.+.+.
T Consensus 131 ~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~--~~~~~~~~~ 201 (352)
T 3gg9_A 131 ASLKHGAWQQSGLKSTTMPPNFGIGRVLKG-QTLGIFGYGKIGQLVAGYGRAF------GMNVLVWGRE--NSKERARAD 201 (352)
T ss_dssp HHHHTTCTTCCCCCCTTSCTTTTSBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSH--HHHHHHHHT
T ss_pred HHHHcCCCCcccccccccccccccCccCCC-CEEEEEeECHHHHHHHHHHHhC------CCEEEEECCC--CCHHHHHhc
Confidence 345677775431 2368999 9999999999999999999988 9998776654 234566778
Q ss_pred CceecCCCcCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 161 GFTEENGTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 161 G~~~~d~~~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
|+.. +.+.+|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 202 g~~~----~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 251 (352)
T 3gg9_A 202 GFAV----AESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTS 251 (352)
T ss_dssp TCEE----CSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECS
T ss_pred CceE----eCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECC
Confidence 8874 45899999999999999997654 3455 46889999999999776
No 79
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.14 E-value=8.2e-10 Score=113.09 Aligned_cols=200 Identities=12% Similarity=0.081 Sum_probs=120.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-------------------cC-ceecCCCcCC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-------------------~G-~~~~d~~~~~ 171 (417)
|||+|||+|.||.++|..|.+. |++|++.++. .+..+...+ .| +.. ..+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~------G~~V~~~d~~-~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~----t~~ 69 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR------GHEVIGVDVS-STKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG----TTD 69 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----ESC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE----eCC
Confidence 5899999999999999999999 9998766554 333333332 23 332 457
Q ss_pred HHhhhccCCeEEEeecchh----------HHHHHHHHHhcCCC---CcEEEEeccchh----h----hhhcc-ccCCCCC
Q 014863 172 IYETISGSDLVLLLISDAA----------QADNYEKIFSCMKP---NSILGLSHGFLL----G----HLQSM-GLDFPKN 229 (417)
Q Consensus 172 ~~Eav~~ADiViLavpd~a----------~~~Vl~eI~p~Lk~---GaiL~~a~G~~i----~----~~~~~-~i~~~~d 229 (417)
+++++++||+||+|+|... ..+++++|.+++++ +++|++.+++.. . .+... +.....+
T Consensus 70 ~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~ 149 (436)
T 1mv8_A 70 FKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVD 149 (436)
T ss_dssp HHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTT
T ss_pred HHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCc
Confidence 8888999999999998655 67888999999999 898876544321 1 12110 1111112
Q ss_pred CcEEEeccCC--chhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccc
Q 014863 230 IGVIAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG 307 (417)
Q Consensus 230 i~VI~v~Pn~--pg~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqt 307 (417)
. .+...|.. ||..+.+++. .+.++ +.. .++++.+.+..++..+|.. ++.++.. ..+..-+.+.+
T Consensus 150 ~-~v~~~Pe~~~~G~~~~~~~~---------~~~iv-~G~-~~~~~~~~~~~l~~~~~~~-v~~~~~~-~ae~~Kl~~N~ 215 (436)
T 1mv8_A 150 F-GVGTNPEFLRESTAIKDYDF---------PPMTV-IGE-LDKQTGDLLEEIYRELDAP-IIRKTVE-VAEMIKYTCNV 215 (436)
T ss_dssp B-EEEECCCCCCTTSHHHHHHS---------CSCEE-EEE-SSHHHHHHHHHHHTTSSSC-EEEEEHH-HHHHHHHHHHH
T ss_pred E-EEEECcccccccccchhccC---------CCEEE-EEc-CCHHHHHHHHHHHhccCCC-EEcCCHH-HHHHHHHHHHH
Confidence 2 34456643 3444333322 11222 222 2578889999999999863 2223221 11111111111
Q ss_pred cccchHHHHHHHHHHHHHHcCCCHHHHHHH
Q 014863 308 ILLGAVHGIVESLFRRFTENGMNEDLAYKN 337 (417)
Q Consensus 308 vL~G~~~a~iea~~~~~v~~Gl~~e~A~~~ 337 (417)
.....-+++..+...+.+.|+++++....
T Consensus 216 -~~a~~ia~~nE~~~l~~~~Gid~~~v~~~ 244 (436)
T 1mv8_A 216 -WHAAKVTFANEIGNIAKAVGVDGREVMDV 244 (436)
T ss_dssp -HHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 11112346677788888999998776553
No 80
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.14 E-value=6.1e-11 Score=118.39 Aligned_cols=106 Identities=20% Similarity=0.109 Sum_probs=82.8
Q ss_pred hhhccCccccc--ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCc
Q 014863 92 YIVRGGRDLFN--LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (417)
Q Consensus 92 ~~~~~g~~~f~--~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~ 169 (417)
..+|+|+|... .....|.| +||||||+|+||.++|+.|+.. |++|+++++...+. . .+.|+. .
T Consensus 121 ~~~~~g~w~~~~~~~~~~l~g-~tvgIiG~G~IG~~vA~~l~~~------G~~V~~~d~~~~~~--~-~~~g~~-----~ 185 (334)
T 2pi1_A 121 DRVKKLNFSQDSEILARELNR-LTLGVIGTGRIGSRVAMYGLAF------GMKVLCYDVVKRED--L-KEKGCV-----Y 185 (334)
T ss_dssp HHHTTTCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCHH--H-HHTTCE-----E
T ss_pred HHHHcCCCccccCccceeccC-ceEEEECcCHHHHHHHHHHHHC------cCEEEEECCCcchh--h-HhcCce-----e
Confidence 34677888654 12478999 9999999999999999999988 99988777654332 1 245776 3
Q ss_pred CCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 170 GDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 170 ~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
.+.+|++++||+|++++|.... ..++ ++.++.||+|++|+.++
T Consensus 186 ~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 230 (334)
T 2pi1_A 186 TSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTA 230 (334)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred cCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECC
Confidence 4699999999999999996544 3455 46888999999999775
No 81
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.13 E-value=5e-11 Score=118.77 Aligned_cols=108 Identities=19% Similarity=0.280 Sum_probs=83.7
Q ss_pred hhhccCccc-c--cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCC
Q 014863 92 YIVRGGRDL-F--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (417)
Q Consensus 92 ~~~~~g~~~-f--~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~ 168 (417)
..+|+|+|. + ......+.| +||||||+|+||.++|+.|+.. |++|+++++.. ...+.+.+.|+.
T Consensus 124 ~~~~~g~w~~~~~~~~~~~l~g-~tvGIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~-~~~~~~~~~g~~----- 190 (330)
T 4e5n_A 124 AFVRSGKFRGWQPRFYGTGLDN-ATVGFLGMGAIGLAMADRLQGW------GATLQYHEAKA-LDTQTEQRLGLR----- 190 (330)
T ss_dssp HHHHTTCCCSCCSCCCCCCSTT-CEEEEECCSHHHHHHHHHTTTS------CCEEEEECSSC-CCHHHHHHHTEE-----
T ss_pred HHHHhCCccccCccccCCccCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCC-CcHhHHHhcCce-----
Confidence 456777775 2 112367899 9999999999999999999888 99987766653 234556667876
Q ss_pred cCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 169 LGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 169 ~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
..+.+|++++||+|++++|.... ..++ ++.++.||+|++|+.++
T Consensus 191 ~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 236 (330)
T 4e5n_A 191 QVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPC 236 (330)
T ss_dssp ECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred eCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECC
Confidence 35899999999999999996544 4455 47889999999998775
No 82
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.13 E-value=9.3e-11 Score=117.71 Aligned_cols=108 Identities=18% Similarity=0.197 Sum_probs=82.5
Q ss_pred hhhhccCccccc----ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecC
Q 014863 91 EYIVRGGRDLFN----LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN 166 (417)
Q Consensus 91 e~~~~~g~~~f~----~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d 166 (417)
+..+|+|+|... .....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+ .+.+ .|...
T Consensus 150 ~~~~r~g~W~~~~~~~~~g~~l~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~-~~~~--~g~~~-- 217 (345)
T 4g2n_A 150 DRMVRSGSWPGWGPTQLLGMGLTG-RRLGIFGMGRIGRAIATRARGF------GLAIHYHNRTRLS-HALE--EGAIY-- 217 (345)
T ss_dssp HHHHHTTCCCCCCTTTTCBCCCTT-CEEEEESCSHHHHHHHHHHHTT------TCEEEEECSSCCC-HHHH--TTCEE--
T ss_pred HHHHHcCCCcccCcccccccccCC-CEEEEEEeChhHHHHHHHHHHC------CCEEEEECCCCcc-hhhh--cCCeE--
Confidence 345678888631 12378999 9999999999999999999988 9998777665322 2222 26663
Q ss_pred CCcCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 167 GTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 167 ~~~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
+.+.+|++++||+|++++|.... ..++ ++.++.||+|++|+.++
T Consensus 218 --~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~a 263 (345)
T 4g2n_A 218 --HDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINIS 263 (345)
T ss_dssp --CSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECS
T ss_pred --eCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECC
Confidence 45899999999999999996544 4555 46888999999999775
No 83
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.12 E-value=6.6e-11 Score=116.17 Aligned_cols=152 Identities=15% Similarity=0.119 Sum_probs=103.0
Q ss_pred hhhccCcccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC
Q 014863 92 YIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (417)
Q Consensus 92 ~~~~~g~~~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~ 171 (417)
..+|+|+|..... ..+.| +||||||+|+||.++|+.|+.. |++|+++++...+. + .+.. ..+
T Consensus 105 ~~~~~g~w~~~~~-~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~-----~~~~----~~~ 166 (290)
T 3gvx_A 105 ELMKAGIFRQSPT-TLLYG-KALGILGYGGIGRRVAHLAKAF------GMRVIAYTRSSVDQ-N-----VDVI----SES 166 (290)
T ss_dssp HHHHTTCCCCCCC-CCCTT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSCCCT-T-----CSEE----CSS
T ss_pred hHhhhcccccCCc-eeeec-chheeeccCchhHHHHHHHHhh------CcEEEEEecccccc-c-----cccc----cCC
Confidence 3467888876543 67999 9999999999999999999998 99988776653321 1 1332 458
Q ss_pred HHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec-cch------hhhhhccccCCCCCCcEEEeccCCchh
Q 014863 172 IYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (417)
Q Consensus 172 ~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~-G~~------i~~~~~~~i~~~~di~VI~v~Pn~pg~ 242 (417)
.+|++++||+|++++|.... ..++ ++.++.||+|++|+.++ |-. +..+++.. ......||....|..|
T Consensus 167 l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~-i~ga~lDV~~~EP~~p-- 243 (290)
T 3gvx_A 167 PADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERS-DVWYLSDVWWNEPEIT-- 243 (290)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCT-TCEEEESCCTTTTSCC--
T ss_pred hHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhcc-ceEEeeccccCCcccc--
Confidence 99999999999999996544 4555 56889999999999776 321 12233211 1123456666666411
Q ss_pred hHHHHHhhcccccCCCceEEEeecC--CCCHHHHHH
Q 014863 243 SVRRLYVQGKEINGAGINSSFAVHQ--DVDGRATNV 276 (417)
Q Consensus 243 ~vr~ly~~G~e~~G~Gv~~liav~q--d~sgea~e~ 276 (417)
++ .--+.+++||- ..+.++.+.
T Consensus 244 ----L~--------~~~nvilTPHiag~~t~e~~~~ 267 (290)
T 3gvx_A 244 ----ET--------NLRNAILSPHVAGGMSGEIMDI 267 (290)
T ss_dssp ----SC--------CCSSEEECCSCSSCBTTBCCHH
T ss_pred ----hh--------hhhhhhcCccccCCccchHHHH
Confidence 11 22577899983 344444433
No 84
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.12 E-value=8.9e-11 Score=118.09 Aligned_cols=109 Identities=15% Similarity=0.152 Sum_probs=85.7
Q ss_pred hhhccCcccccc---cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCC
Q 014863 92 YIVRGGRDLFNL---LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (417)
Q Consensus 92 ~~~~~g~~~f~~---~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~ 168 (417)
..+|+|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++.. ...+.+.+.|+..
T Consensus 143 ~~~~~g~W~~~~~~~~~~~l~g-ktvGIIG~G~IG~~vA~~l~~~------G~~V~~~dr~~-~~~~~~~~~g~~~---- 210 (351)
T 3jtm_A 143 NQVVKGEWNVAGIAYRAYDLEG-KTIGTVGAGRIGKLLLQRLKPF------GCNLLYHDRLQ-MAPELEKETGAKF---- 210 (351)
T ss_dssp HHHHTTCCCHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHGGG------CCEEEEECSSC-CCHHHHHHHCCEE----
T ss_pred HHHHcCCCccccccCCcccccC-CEEeEEEeCHHHHHHHHHHHHC------CCEEEEeCCCc-cCHHHHHhCCCeE----
Confidence 456788886432 2357999 9999999999999999999988 99987766553 3455666678774
Q ss_pred cCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 169 LGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 169 ~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
+.+.+|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 211 ~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 256 (351)
T 3jtm_A 211 VEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNA 256 (351)
T ss_dssp CSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECS
T ss_pred cCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECc
Confidence 56899999999999999996543 4555 46888999999998775
No 85
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.12 E-value=8e-10 Score=114.24 Aligned_cols=203 Identities=13% Similarity=0.111 Sum_probs=123.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-------------------cC-ceecCCCcCC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-------------------~G-~~~~d~~~~~ 171 (417)
|||+|||+|.||.++|.+|.+. |++|+++++. ....+...+ .| +.. ..+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~------G~~V~~~D~~-~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~----t~d 71 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL------GANVRCIDTD-RNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF----GTE 71 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE----ESC
T ss_pred CEEEEECcCHHHHHHHHHHHhc------CCEEEEEECC-HHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE----ECC
Confidence 6999999999999999999999 9998776655 333333322 12 222 467
Q ss_pred HHhhhccCCeEEEeecch----------hHHHHHHHHHhcCCCCcEEEEeccchhh-------hhhccccCCCCCCc-EE
Q 014863 172 IYETISGSDLVLLLISDA----------AQADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFPKNIG-VI 233 (417)
Q Consensus 172 ~~Eav~~ADiViLavpd~----------a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~-------~~~~~~i~~~~di~-VI 233 (417)
+++++++||+||+++|.. ...+++++|.+++++|++|++.+++... .+.+.......+.+ .+
T Consensus 72 ~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v 151 (450)
T 3gg2_A 72 IEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDI 151 (450)
T ss_dssp HHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeE
Confidence 889999999999999977 6778999999999999998887755311 11110001111122 35
Q ss_pred EeccCCc--hhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC--cccccchhhhhhhhcccccccc
Q 014863 234 AVCPKGM--GPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP--FTFATTLEQEYRSDIFGERGIL 309 (417)
Q Consensus 234 ~v~Pn~p--g~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~--~~iett~~~E~~~dlfgeqtvL 309 (417)
...|... |..+++... .+.++ +.. .+.++.+.+..++..++.. .++.++. ...+.--+.+.+ +
T Consensus 152 ~~~Pe~a~eG~~~~~~~~---------p~~iv-vG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~-~~aE~~Kl~~N~-~ 218 (450)
T 3gg2_A 152 ASNPEFLKEGNAIDDFMK---------PDRVV-VGV-DSDRARELITSLYKPMLLNNFRVLFMDI-ASAEMTKYAANA-M 218 (450)
T ss_dssp EECCCCCCTTSHHHHHHS---------CSCEE-EEE-SSHHHHHHHHHHHTTTCCSCCCEEEECH-HHHHHHHHHHHH-H
T ss_pred EechhhhcccchhhhccC---------CCEEE-EEc-CCHHHHHHHHHHHHHHhcCCCeEEecCH-HHHHHHHHHHHH-H
Confidence 5667532 222222111 12222 222 2568899999999998862 2222221 122222232332 1
Q ss_pred cchHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 014863 310 LGAVHGIVESLFRRFTENGMNEDLAYKNT 338 (417)
Q Consensus 310 ~G~~~a~iea~~~~~v~~Gl~~e~A~~~~ 338 (417)
....-+++.-+...+.+.|+++++.+..+
T Consensus 219 ~a~~ia~~nE~~~l~~~~Gid~~~v~~~~ 247 (450)
T 3gg2_A 219 LATRISFMNDVANLCERVGADVSMVRLGI 247 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 22233356667778888899988776644
No 86
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.11 E-value=8.1e-11 Score=117.04 Aligned_cols=108 Identities=22% Similarity=0.268 Sum_probs=83.0
Q ss_pred hhhhccCccc-----cc---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCc
Q 014863 91 EYIVRGGRDL-----FN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF 162 (417)
Q Consensus 91 e~~~~~g~~~-----f~---~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~ 162 (417)
...+|+|+|. +. .....+.| ++|||||+|.||.++|+.|+.. |++|+++++...+ +.+.+.|+
T Consensus 123 ~~~~~~~~w~~~~~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~ 193 (334)
T 2dbq_A 123 DRFVRSGEWKKRGVAWHPKWFLGYDVYG-KTIGIIGLGRIGQAIAKRAKGF------NMRILYYSRTRKE--EVERELNA 193 (334)
T ss_dssp HHHHHTSHHHHTTCCCCTTTTCCCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHHCC
T ss_pred HHHHHcCCCcccccccccccccccCCCC-CEEEEEccCHHHHHHHHHHHhC------CCEEEEECCCcch--hhHhhcCc
Confidence 3446677774 11 11257899 9999999999999999999988 9998777765433 45556677
Q ss_pred eecCCCcCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 163 TEENGTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 163 ~~~d~~~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
. ..+.++++++||+|++++|+... ..++ +++.+.|++|++|+.++
T Consensus 194 ~-----~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~s 240 (334)
T 2dbq_A 194 E-----FKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIA 240 (334)
T ss_dssp E-----ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred c-----cCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 5 35788999999999999998874 4566 46788999999987554
No 87
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.11 E-value=8.4e-11 Score=115.78 Aligned_cols=104 Identities=11% Similarity=0.081 Sum_probs=80.9
Q ss_pred hhhccCcccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC
Q 014863 92 YIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (417)
Q Consensus 92 ~~~~~g~~~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~ 171 (417)
..+|+|+|........+.| ++|||||+|+||.++|+.|+.. |++|+++++... +. +... ..+
T Consensus 106 ~~~~~g~w~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~dr~~~---~~----~~~~----~~~ 167 (303)
T 1qp8_A 106 EKMKRGDYGRDVEIPLIQG-EKVAVLGLGEIGTRVGKILAAL------GAQVRGFSRTPK---EG----PWRF----TNS 167 (303)
T ss_dssp HHHHTTCCCCCSCCCCCTT-CEEEEESCSTHHHHHHHHHHHT------TCEEEEECSSCC---CS----SSCC----BSC
T ss_pred HHHHcCCCCCCCCCCCCCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcc---cc----Cccc----CCC
Confidence 4567888854322347999 9999999999999999999988 999877666533 11 3332 457
Q ss_pred HHhhhccCCeEEEeecchhH-HHHHH-HHHhcCCCCcEEEEecc
Q 014863 172 IYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSHG 213 (417)
Q Consensus 172 ~~Eav~~ADiViLavpd~a~-~~Vl~-eI~p~Lk~GaiL~~a~G 213 (417)
.++++++||+|++++|.... ..++. ++++.||+|++|+.++-
T Consensus 168 l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~sr 211 (303)
T 1qp8_A 168 LEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGR 211 (303)
T ss_dssp SHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred HHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCC
Confidence 88999999999999998754 56664 68899999999997764
No 88
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.10 E-value=8.5e-11 Score=117.98 Aligned_cols=108 Identities=19% Similarity=0.183 Sum_probs=82.9
Q ss_pred hhhccCcccccc--------cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCce
Q 014863 92 YIVRGGRDLFNL--------LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFT 163 (417)
Q Consensus 92 ~~~~~g~~~f~~--------~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~ 163 (417)
..+|+|+|.... +...+.| ++|||||+|+||.++|+.|+.. |++|+++++...+ ..+.+.|+.
T Consensus 142 ~~~~~g~w~~~~~~~~~~~~~~~~l~g-~tvGIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~ 212 (347)
T 1mx3_A 142 QALREGTRVQSVEQIREVASGAARIRG-ETLGIIGLGRVGQAVALRAKAF------GFNVLFYDPYLSD--GVERALGLQ 212 (347)
T ss_dssp HHHHTTCCCCSHHHHHHHTTTCCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECTTSCT--THHHHHTCE
T ss_pred HHHHcCCcccccccccccccCccCCCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCcch--hhHhhcCCe
Confidence 346778874221 1257899 9999999999999999999988 9998877765433 234556775
Q ss_pred ecCCCcCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 164 EENGTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 164 ~~d~~~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
. +.+.+|++++||+|++++|+... ..++ ++.++.||+|++|+.++
T Consensus 213 ~----~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 259 (347)
T 1mx3_A 213 R----VSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTA 259 (347)
T ss_dssp E----CSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECS
T ss_pred e----cCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECC
Confidence 3 45889999999999999998644 4566 56788999999988665
No 89
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.10 E-value=1.5e-10 Score=114.29 Aligned_cols=154 Identities=21% Similarity=0.169 Sum_probs=102.9
Q ss_pred hhhhccCcccc-c---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecC
Q 014863 91 EYIVRGGRDLF-N---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN 166 (417)
Q Consensus 91 e~~~~~g~~~f-~---~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d 166 (417)
...+|+|+|.. . .....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+.. +.
T Consensus 121 ~~~~~~g~w~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~~-------~~--- 183 (311)
T 2cuk_A 121 AAYARDGLWKAWHPELLLGLDLQG-LTLGLVGMGRIGQAVAKRALAF------GMRVVYHARTPKPLP-------YP--- 183 (311)
T ss_dssp HHHHHTTCCCCCCTTTTCBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSSS-------SC---
T ss_pred HHHHHcCCCCccccccccCcCCCC-CEEEEEEECHHHHHHHHHHHHC------CCEEEEECCCCcccc-------cc---
Confidence 44567888852 1 12357999 9999999999999999999988 999877766543321 22
Q ss_pred CCcCCHHhhhccCCeEEEeecchhH-HHHHH-HHHhcCCCCcEEEEeccchh-------hhhhccccCCCCCCcEEEecc
Q 014863 167 GTLGDIYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSHGFLL-------GHLQSMGLDFPKNIGVIAVCP 237 (417)
Q Consensus 167 ~~~~~~~Eav~~ADiViLavpd~a~-~~Vl~-eI~p~Lk~GaiL~~a~G~~i-------~~~~~~~i~~~~di~VI~v~P 237 (417)
..+.++++++||+|++++|+... ..++. +..+.||+|++|+.++--.+ ..+. +......+||+..+|
T Consensus 184 --~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~--g~i~ga~lDv~~~eP 259 (311)
T 2cuk_A 184 --FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR--GHLFGAGLDVTDPEP 259 (311)
T ss_dssp --BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT--TTSSEEEESSCSSSS
T ss_pred --cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh--CcCCEEEEeeCCCCC
Confidence 35789999999999999998754 56664 67789999999886653321 1121 111112456777777
Q ss_pred CCchhhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHH
Q 014863 238 KGMGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV 276 (417)
Q Consensus 238 n~pg~~vr~ly~~G~e~~G~Gv~~liav~qd-~sgea~e~ 276 (417)
..+.+ .+|. .-+.+++||.. .|.++.+.
T Consensus 260 ~~~~~---~L~~--------~~nviltPh~~~~t~~~~~~ 288 (311)
T 2cuk_A 260 LPPGH---PLYA--------LPNAVITPHIGSAGRTTRER 288 (311)
T ss_dssp CCTTS---GGGG--------CTTEEECCSCTTCBHHHHHH
T ss_pred CCCCC---hhhh--------CCCEEECCcCCCCCHHHHHH
Confidence 32222 2343 36888999874 34444333
No 90
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.09 E-value=1.4e-10 Score=118.45 Aligned_cols=161 Identities=14% Similarity=0.020 Sum_probs=106.5
Q ss_pred hhhhccCcccccc---cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCC
Q 014863 91 EYIVRGGRDLFNL---LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG 167 (417)
Q Consensus 91 e~~~~~g~~~f~~---~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~ 167 (417)
...+|+|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++... ..+.+.+.|+..
T Consensus 169 ~~~~~~g~W~~~~~~~~~~~l~g-ktvGIIGlG~IG~~vA~~l~a~------G~~V~~~d~~~~-~~~~~~~~G~~~--- 237 (393)
T 2nac_A 169 HEWARKGGWNIADCVSHAYDLEA-MHVGTVAAGRIGLAVLRRLAPF------DVHLHYTDRHRL-PESVEKELNLTW--- 237 (393)
T ss_dssp HHHHHTTCCCHHHHHTTCCCCTT-CEEEEECCSHHHHHHHHHHGGG------TCEEEEECSSCC-CHHHHHHHTCEE---
T ss_pred HHHHHcCCCCccccccCCccCCC-CEEEEEeECHHHHHHHHHHHhC------CCEEEEEcCCcc-chhhHhhcCcee---
Confidence 3457788996321 1257899 9999999999999999999988 999877666532 345566678764
Q ss_pred CcCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec-cch------hhhhhccccCCCCCCcEEEeccC
Q 014863 168 TLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPK 238 (417)
Q Consensus 168 ~~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~-G~~------i~~~~~~~i~~~~di~VI~v~Pn 238 (417)
..+.++++++||+|++++|.... ..++ ++.++.||+|++|+.++ |-. ...+.+..+ -...+||+...|.
T Consensus 238 -~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i-~gA~lDV~~~EP~ 315 (393)
T 2nac_A 238 -HATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRL-AGYAGDVWFPQPA 315 (393)
T ss_dssp -CSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSE-EEEEESCCSSSSC
T ss_pred -cCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCe-eEEEEEecCCCCC
Confidence 35789999999999999996543 4666 46888999999988664 321 112222111 1124566666674
Q ss_pred CchhhHHHHHhhcccccCCCceEEEeecCC-CCHHHHH
Q 014863 239 GMGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATN 275 (417)
Q Consensus 239 ~pg~~vr~ly~~G~e~~G~Gv~~liav~qd-~sgea~e 275 (417)
.+.+- ++. --+.+++||.. .+.++.+
T Consensus 316 ~~~~p---L~~--------~~nvilTPHia~~T~e~~~ 342 (393)
T 2nac_A 316 PKDHP---WRT--------MPYNGMTPHISGTTLTAQA 342 (393)
T ss_dssp CTTCG---GGT--------STTBCCCCSCTTCSHHHHH
T ss_pred CCCCh---hHc--------CCCEEECCCCCcCcHHHHH
Confidence 32222 222 24567888863 3444443
No 91
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.09 E-value=1.3e-10 Score=117.25 Aligned_cols=110 Identities=15% Similarity=0.041 Sum_probs=85.3
Q ss_pred hhhhccCccccc---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCce-EEEEecCCchhHHHHHHcCceecC
Q 014863 91 EYIVRGGRDLFN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEEN 166 (417)
Q Consensus 91 e~~~~~g~~~f~---~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~-Vivg~r~~~~s~~~A~~~G~~~~d 166 (417)
...+|+|+|... .....+.| ++|||||+|+||.++|+.|+.. |++ |+++++.. ...+.+.+.|+..
T Consensus 142 ~~~~~~g~W~~~~~~~~~~~l~g-~tvgIIG~G~IG~~vA~~l~~~------G~~~V~~~d~~~-~~~~~~~~~g~~~-- 211 (364)
T 2j6i_A 142 HEQIINHDWEVAAIAKDAYDIEG-KTIATIGAGRIGYRVLERLVPF------NPKELLYYDYQA-LPKDAEEKVGARR-- 211 (364)
T ss_dssp HHHHHTTCCCHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHGGG------CCSEEEEECSSC-CCHHHHHHTTEEE--
T ss_pred HHHHHhCCCCcCcccCCcccCCC-CEEEEECcCHHHHHHHHHHHhC------CCcEEEEECCCc-cchhHHHhcCcEe--
Confidence 345678888642 12367999 9999999999999999999988 996 87766543 2345666778764
Q ss_pred CCcCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 167 GTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 167 ~~~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
+.+.++++++||+|++++|.... ..++ ++.++.|++|++|+.++
T Consensus 212 --~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~a 257 (364)
T 2j6i_A 212 --VENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTA 257 (364)
T ss_dssp --CSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECS
T ss_pred --cCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECC
Confidence 45899999999999999998754 4566 46789999999888664
No 92
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.08 E-value=2.2e-10 Score=115.94 Aligned_cols=159 Identities=14% Similarity=0.168 Sum_probs=105.5
Q ss_pred hhhhccCccccc----ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecC
Q 014863 91 EYIVRGGRDLFN----LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN 166 (417)
Q Consensus 91 e~~~~~g~~~f~----~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d 166 (417)
+..+|+|+|.+. .....+.| ++|||||+|.||.++|+.++.. |++|+++++.. ..+.+.+.|+.
T Consensus 153 ~~~~r~g~~~w~~~~~~~~~~l~g-ktvGIIGlG~IG~~vA~~l~~f------G~~V~~~d~~~--~~~~~~~~g~~--- 220 (365)
T 4hy3_A 153 DIAFQEGTELWGGEGNASARLIAG-SEIGIVGFGDLGKALRRVLSGF------RARIRVFDPWL--PRSMLEENGVE--- 220 (365)
T ss_dssp HHHHHHTCCCCSSSSTTSCCCSSS-SEEEEECCSHHHHHHHHHHTTS------CCEEEEECSSS--CHHHHHHTTCE---
T ss_pred HHHHHcCCccccccccccccccCC-CEEEEecCCcccHHHHHhhhhC------CCEEEEECCCC--CHHHHhhcCee---
Confidence 344677774322 12468999 9999999999999999999888 99987766652 34556677887
Q ss_pred CCcCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec-cch------hhhhhccccCCCCCCcEEEecc
Q 014863 167 GTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCP 237 (417)
Q Consensus 167 ~~~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~-G~~------i~~~~~~~i~~~~di~VI~v~P 237 (417)
..+.+|++++||+|++++|.... ..++ .+.+..||+|++|+.++ |-. +..+++..+. ..+||.--.|
T Consensus 221 --~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~--aaLDV~~~EP 296 (365)
T 4hy3_A 221 --PASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV--AASDVYPEEP 296 (365)
T ss_dssp --ECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE--EEESCCSSSS
T ss_pred --eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce--EEeeCCCCCC
Confidence 35899999999999999997654 4556 46889999999999775 321 2233332222 3455555555
Q ss_pred CCchhhHHHHHhhcccccCCCceEEEeecC-CCCHHHHHH
Q 014863 238 KGMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (417)
Q Consensus 238 n~pg~~vr~ly~~G~e~~G~Gv~~liav~q-d~sgea~e~ 276 (417)
--+.+- ++. --+.+++||- ..+.++.+.
T Consensus 297 l~~~~p---L~~--------~~nvilTPHia~~t~e~~~~ 325 (365)
T 4hy3_A 297 LPLDHP---VRS--------LKGFIRSAHRAGALDSAFKK 325 (365)
T ss_dssp CCTTCG---GGT--------CTTEEECCSCSSCCHHHHHH
T ss_pred CCCCCh---hhc--------CCCEEECCccccCHHHHHHH
Confidence 322221 222 1467888886 345555433
No 93
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.07 E-value=1.1e-10 Score=116.60 Aligned_cols=155 Identities=21% Similarity=0.233 Sum_probs=103.2
Q ss_pred hhhhccCcccccc--cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCC
Q 014863 91 EYIVRGGRDLFNL--LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (417)
Q Consensus 91 e~~~~~g~~~f~~--~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~ 168 (417)
+..+|+|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|+++++...+. .|+..
T Consensus 143 ~~~~~~g~w~~~~~~~~~~l~g-~~vgIIG~G~iG~~vA~~l~~~------G~~V~~~dr~~~~~------~g~~~---- 205 (333)
T 3ba1_A 143 DKYVRRGAWKFGDFKLTTKFSG-KRVGIIGLGRIGLAVAERAEAF------DCPISYFSRSKKPN------TNYTY---- 205 (333)
T ss_dssp HHHHHTTGGGGCCCCCCCCCTT-CCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCCTT------CCSEE----
T ss_pred HHHHHcCCCCccccccccccCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCCchhc------cCcee----
Confidence 4456788886421 1368999 9999999999999999999988 99988777654321 25553
Q ss_pred cCCHHhhhccCCeEEEeecchh-HHHHH-HHHHhcCCCCcEEEEec-cchh------hhhhccccCCCCCCcEEEeccCC
Q 014863 169 LGDIYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLSH-GFLL------GHLQSMGLDFPKNIGVIAVCPKG 239 (417)
Q Consensus 169 ~~~~~Eav~~ADiViLavpd~a-~~~Vl-~eI~p~Lk~GaiL~~a~-G~~i------~~~~~~~i~~~~di~VI~v~Pn~ 239 (417)
..+.++++++||+|++++|+.. ...++ +++.+.|++|++|+.++ |..+ ..+.+..+ -...+||+..+|.-
T Consensus 206 ~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i-~ga~lDv~~~EP~~ 284 (333)
T 3ba1_A 206 YGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRL-GGAGLDVFEREPEV 284 (333)
T ss_dssp ESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSS-CEEEESCCTTTTCC
T ss_pred cCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCC-eEEEEecCCCCCCC
Confidence 4688999999999999999864 45666 46778899999988554 4321 12222111 01245676667742
Q ss_pred chhhHHHHHhhcccccCCCceEEEeecCC-CCHHHHH
Q 014863 240 MGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATN 275 (417)
Q Consensus 240 pg~~vr~ly~~G~e~~G~Gv~~liav~qd-~sgea~e 275 (417)
+ . .++. ..+.+++||.. .+.++.+
T Consensus 285 ~-~---~L~~--------~~nviltPH~~~~t~e~~~ 309 (333)
T 3ba1_A 285 P-E---KLFG--------LENVVLLPHVGSGTVETRK 309 (333)
T ss_dssp C-G---GGGG--------CTTEEECSSCTTCSHHHHH
T ss_pred c-c---hhhc--------CCCEEECCcCCCCCHHHHH
Confidence 2 2 2332 26778888863 3444443
No 94
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.05 E-value=1.3e-10 Score=115.73 Aligned_cols=107 Identities=18% Similarity=0.142 Sum_probs=81.6
Q ss_pred hhhhccCcccc----ccc---ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCce
Q 014863 91 EYIVRGGRDLF----NLL---PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFT 163 (417)
Q Consensus 91 e~~~~~g~~~f----~~~---~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~ 163 (417)
...+|+|+|.. ..+ ...+.| ++|||||+|.||.++|+.|+.. |++|+++++...+ +.+.+.|+.
T Consensus 120 ~~~~~~g~w~~~~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~ 190 (333)
T 2d0i_A 120 DKFIRRGEWESHAKIWTGFKRIESLYG-KKVGILGMGAIGKAIARRLIPF------GVKLYYWSRHRKV--NVEKELKAR 190 (333)
T ss_dssp HHHHHTTCCCCHHHHHTTSCCCCCSTT-CEEEEECCSHHHHHHHHHHGGG------TCEEEEECSSCCH--HHHHHHTEE
T ss_pred HHHHHcCCCCcCcccccCCcccCCCCc-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcch--hhhhhcCce
Confidence 34567788842 111 157899 9999999999999999999988 9998777665433 555566776
Q ss_pred ecCCCcCCHHhhhccCCeEEEeecch-hHHHHHH-HHHhcCCCCcEEEEec
Q 014863 164 EENGTLGDIYETISGSDLVLLLISDA-AQADNYE-KIFSCMKPNSILGLSH 212 (417)
Q Consensus 164 ~~d~~~~~~~Eav~~ADiViLavpd~-a~~~Vl~-eI~p~Lk~GaiL~~a~ 212 (417)
. .+.++++++||+|++++|.. ....++. ++.+.|++| +|+.++
T Consensus 191 ~-----~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~s 235 (333)
T 2d0i_A 191 Y-----MDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIG 235 (333)
T ss_dssp E-----CCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECS
T ss_pred e-----cCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECC
Confidence 3 47889999999999999988 4456664 577889999 887654
No 95
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.05 E-value=2.6e-10 Score=114.10 Aligned_cols=111 Identities=18% Similarity=0.129 Sum_probs=83.9
Q ss_pred hhhhccCc---ccc-c----ccccccCCCCEEEEEcccchHHHHHHHHH-hhhhhhcCCceEEEEecCCchhHHHHHHcC
Q 014863 91 EYIVRGGR---DLF-N----LLPDAFNGINQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGSRSFAEARAAG 161 (417)
Q Consensus 91 e~~~~~g~---~~f-~----~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr-~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G 161 (417)
...+|+|+ |.. . .....+.| ++|||||+|.||.++|+.++ .. |++|+++++.. ...+.+.+.|
T Consensus 136 ~~~~~~g~~~~w~~~~~~~~~~~~~l~g-~~vgIIG~G~IG~~vA~~l~~~~------G~~V~~~d~~~-~~~~~~~~~g 207 (348)
T 2w2k_A 136 ERAARTGDPETFNRVHLEIGKSAHNPRG-HVLGAVGLGAIQKEIARKAVHGL------GMKLVYYDVAP-ADAETEKALG 207 (348)
T ss_dssp HHHHTTCCHHHHHHHHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEECSSC-CCHHHHHHHT
T ss_pred HHHHHcCCCcccccccccccccCcCCCC-CEEEEEEECHHHHHHHHHHHHhc------CCEEEEECCCC-cchhhHhhcC
Confidence 44567788 831 1 12367999 99999999999999999999 88 99987766553 3344455567
Q ss_pred ceecCCCcCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEecc
Q 014863 162 FTEENGTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 162 ~~~~d~~~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~G 213 (417)
+.. +.+.++++++||+|++++|+... ..++ .++.+.|++|++|+.++.
T Consensus 208 ~~~----~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~sr 257 (348)
T 2w2k_A 208 AER----VDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTAR 257 (348)
T ss_dssp CEE----CSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred cEE----eCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence 764 34788999999999999998754 4565 467788999999886654
No 96
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.05 E-value=2.6e-10 Score=113.17 Aligned_cols=109 Identities=18% Similarity=0.137 Sum_probs=83.4
Q ss_pred hhhhccCcccc-c---ccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecC
Q 014863 91 EYIVRGGRDLF-N---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN 166 (417)
Q Consensus 91 e~~~~~g~~~f-~---~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d 166 (417)
...+|+|+|.. . .....+.| +||||||+|.||.++|+.|+.. |++|+++++... ..+.+.+.|+..
T Consensus 132 ~~~~~~~~w~~~~~~~~~~~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~-~~~~~~~~g~~~-- 201 (330)
T 2gcg_A 132 IEEVKNGGWTSWKPLWLCGYGLTQ-STVGIIGLGRIGQAIARRLKPF------GVQRFLYTGRQP-RPEEAAEFQAEF-- 201 (330)
T ss_dssp HHHHHTTCCCSCCTTSSCBCCCTT-CEEEEECCSHHHHHHHHHHGGG------TCCEEEEESSSC-CHHHHHTTTCEE--
T ss_pred HHHHHcCCCcccCcccccCcCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCc-chhHHHhcCcee--
Confidence 34567788853 1 11267899 9999999999999999999988 999887776533 344455667763
Q ss_pred CCcCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 167 GTLGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 167 ~~~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
. +.++++++||+|++++|+... ..++ +++.+.|++|++|+.++
T Consensus 202 --~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~s 246 (330)
T 2gcg_A 202 --V-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINIS 246 (330)
T ss_dssp --C-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECS
T ss_pred --C-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 3 888999999999999998754 4555 46788999999887654
No 97
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.05 E-value=1.2e-09 Score=106.93 Aligned_cols=153 Identities=20% Similarity=0.174 Sum_probs=100.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecC---C--------CcCCHHhhhccCC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---G--------TLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d---~--------~~~~~~Eav~~AD 180 (417)
+||+|||.|+||.++|..|.++ |++|.+..|.. .+...+.|+...+ + .+.+.+++.+.+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~---~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT------GHCVSVVSRSD---YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT------TCEEEEECSTT---HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCh---HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCC
Confidence 7999999999999999999999 99998887753 2455555653211 0 1245666666899
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEE-EEeccch-hhhhhccccCCCCCCcEEEecc------CCchhhHHHHHhhcc
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFL-LGHLQSMGLDFPKNIGVIAVCP------KGMGPSVRRLYVQGK 252 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL-~~a~G~~-i~~~~~~~i~~~~di~VI~v~P------n~pg~~vr~ly~~G~ 252 (417)
+||++||..+..++++++.|+++++++| ++..|+. ...+.+ .+|.+ .|+.... ..|+.+. .+
T Consensus 74 lVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~---~~~~~-~vl~g~~~~~a~~~~pg~v~-----~~- 143 (320)
T 3i83_A 74 CTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAA---AFPDN-EVISGLAFIGVTRTAPGEIW-----HQ- 143 (320)
T ss_dssp EEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHH---HSTTS-CEEEEEEEEEEEEEETTEEE-----EE-
T ss_pred EEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHH---HCCCC-cEEEEEEEeceEEcCCCEEE-----EC-
Confidence 9999999999999999999999988864 5778986 344544 34443 4443222 2234431 11
Q ss_pred cccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 253 EINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 253 e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
|.|... +......+.+..+...+++...|..
T Consensus 144 ---~~~~~~-ig~~~~~~~~~~~~l~~~l~~~~~~ 174 (320)
T 3i83_A 144 ---AYGRLM-LGNYPGGVSERVKTLAAAFEEAGID 174 (320)
T ss_dssp ---EEEEEE-EEESSSCCCHHHHHHHHHHHHTTSC
T ss_pred ---CCCEEE-EecCCCCccHHHHHHHHHHHhCCCC
Confidence 122222 3322222335556667788887765
No 98
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.05 E-value=9.3e-10 Score=108.45 Aligned_cols=94 Identities=17% Similarity=0.231 Sum_probs=74.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecC---------CCcCCHHhhhccCCeE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---------GTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d---------~~~~~~~Eav~~ADiV 182 (417)
+||+|||+|+||.++|..|.++ |++|.+..|. +..+...+.|+.... ....+.++ ++++|+|
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~------g~~V~~~~r~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~V 74 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA------GEAINVLARG--ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVV 74 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT------TCCEEEECCH--HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCEEEEEECh--HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEE
Confidence 7999999999999999999999 9998887764 345666677775310 01235555 5899999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEE-Eeccc
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNSILG-LSHGF 214 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~GaiL~-~a~G~ 214 (417)
|++||+.+..++++++.|+++++++|+ +..|+
T Consensus 75 ilavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 75 IVAVKAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp EECCCHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred EEeCCchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 999999988999999999999998755 66785
No 99
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.04 E-value=6.5e-11 Score=117.38 Aligned_cols=106 Identities=10% Similarity=0.056 Sum_probs=81.0
Q ss_pred hhhccCcccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC
Q 014863 92 YIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (417)
Q Consensus 92 ~~~~~g~~~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~ 171 (417)
..+|+|+|..... ..+.| ++|||||+|+||.++|+.|+.. |++|+++++..... .++... ....+
T Consensus 122 ~~~~~g~W~~~~~-~~l~g-~tvGIiG~G~IG~~vA~~l~~~------G~~V~~~dr~~~~~------~~~~~~-~~~~~ 186 (315)
T 3pp8_A 122 ALKNQALWKPLPE-YTREE-FSVGIMGAGVLGAKVAESLQAW------GFPLRCWSRSRKSW------PGVESY-VGREE 186 (315)
T ss_dssp HHHHTTCCCCCCC-CCSTT-CCEEEECCSHHHHHHHHHHHTT------TCCEEEEESSCCCC------TTCEEE-ESHHH
T ss_pred HHHHhcccCCCCC-CCcCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEEcCCchhh------hhhhhh-cccCC
Confidence 3467788976544 78999 9999999999999999999988 99988777654321 233210 00246
Q ss_pred HHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 172 IYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 172 ~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
.+|++++||+|++++|.... ..++ .+.++.||+|++|+.++
T Consensus 187 l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 229 (315)
T 3pp8_A 187 LRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLA 229 (315)
T ss_dssp HHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECS
T ss_pred HHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECC
Confidence 88999999999999996544 4566 57889999999998765
No 100
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.03 E-value=8.9e-11 Score=116.83 Aligned_cols=151 Identities=12% Similarity=0.101 Sum_probs=100.4
Q ss_pred hhhhccCcccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcC
Q 014863 91 EYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (417)
Q Consensus 91 e~~~~~g~~~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~ 170 (417)
...+|+|+|........+.| ++|||||+|+||.++|+.|+.. |++|+++++...+. +.+ ..... ..
T Consensus 118 ~~~~~~~~W~~~~~~~~l~g-ktvGIiGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~~~-~~~~~-----~~ 183 (324)
T 3evt_A 118 LNQRGARQWALPMTTSTLTG-QQLLIYGTGQIGQSLAAKASAL------GMHVIGVNTTGHPA-DHF-HETVA-----FT 183 (324)
T ss_dssp HHHTTTCCSSCSSCCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCCCC-TTC-SEEEE-----GG
T ss_pred HHHHhcCCcccCCCCccccC-CeEEEECcCHHHHHHHHHHHhC------CCEEEEECCCcchh-HhH-hhccc-----cC
Confidence 44567889976543478999 9999999999999999999988 99988777653321 111 11112 35
Q ss_pred CHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec-cch------hhhhhccccCCCCCCcEEEeccCCch
Q 014863 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMG 241 (417)
Q Consensus 171 ~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~-G~~------i~~~~~~~i~~~~di~VI~v~Pn~pg 241 (417)
+.+|++++||+|++++|.... ..++ .+.+..||+|++|+.++ |-. +..+++..+ -....||.-..|.-+.
T Consensus 184 ~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i-~gA~lDV~~~EPl~~~ 262 (324)
T 3evt_A 184 ATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQL-SMAALDVTEPEPLPTD 262 (324)
T ss_dssp GCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSC-SEEEESSCSSSSCCTT
T ss_pred CHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCc-eEEEeCCCCCCCCCCC
Confidence 788999999999999996554 4555 46888999999999775 321 222332111 1234566666663322
Q ss_pred hhHHHHHhhcccccCCCceEEEeecC
Q 014863 242 PSVRRLYVQGKEINGAGINSSFAVHQ 267 (417)
Q Consensus 242 ~~vr~ly~~G~e~~G~Gv~~liav~q 267 (417)
+- ++.. -+.+++||-
T Consensus 263 ~p---L~~~--------~nvilTPHi 277 (324)
T 3evt_A 263 HP---LWQR--------DDVLITPHI 277 (324)
T ss_dssp CG---GGGC--------SSEEECCSC
T ss_pred Ch---hhcC--------CCEEEcCcc
Confidence 21 2221 467888886
No 101
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.03 E-value=1.4e-09 Score=113.23 Aligned_cols=207 Identities=12% Similarity=0.068 Sum_probs=118.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc-------------------CceecCCCcCC
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------------GFTEENGTLGD 171 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~-------------------G~~~~d~~~~~ 171 (417)
|+||+|||+|.||.++|.+|.+. |.|++|+++++. ....+...+. ++.. ..+
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~----g~g~~V~~~D~~-~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~----t~~ 79 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHK----CPHITVTVVDMN-TAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF----SSD 79 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSC-HHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE----ESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECC-HHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE----ECC
Confidence 47999999999999999999887 224687766554 3333333221 1221 346
Q ss_pred HHhhhccCCeEEEeecchh---------------HHHHHHHHHhcCCCCcEEEEeccchh---hh----hhc-cccCCCC
Q 014863 172 IYETISGSDLVLLLISDAA---------------QADNYEKIFSCMKPNSILGLSHGFLL---GH----LQS-MGLDFPK 228 (417)
Q Consensus 172 ~~Eav~~ADiViLavpd~a---------------~~~Vl~eI~p~Lk~GaiL~~a~G~~i---~~----~~~-~~i~~~~ 228 (417)
+.+++++||+||+++|... ..+++++|.+++++|++|++.+.+.. .. +.+ .++. .
T Consensus 80 ~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~--~ 157 (481)
T 2o3j_A 80 IPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNN--E 157 (481)
T ss_dssp HHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC-----
T ss_pred HHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcC--c
Confidence 7788999999999987532 56788889999999999887654431 11 111 1110 1
Q ss_pred CCc-EEEeccC--CchhhHHHHHhhcccccCCCceEEEeecCC-CCHHHHHHHHHHHHHhCC-Ccccccchhhhhhhhcc
Q 014863 229 NIG-VIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQD-VDGRATNVALGWSVALGS-PFTFATTLEQEYRSDIF 303 (417)
Q Consensus 229 di~-VI~v~Pn--~pg~~vr~ly~~G~e~~G~Gv~~liav~qd-~sgea~e~a~al~~aiG~-~~~iett~~~E~~~dlf 303 (417)
+++ .+..+|. .||..+.+++.- -..++....+ .+.++.+.+..++..+|. ...+.++. ...+.--+
T Consensus 158 ~~d~~v~~~Pe~~~~G~a~~~~~~~--------~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~-~~ae~~Kl 228 (481)
T 2o3j_A 158 NLKFQVLSNPEFLAEGTAMKDLANP--------DRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNT-WSSELSKL 228 (481)
T ss_dssp -CCEEEEECCCCCCTTCHHHHHHSC--------SCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEH-HHHHHHHH
T ss_pred CCceEEEeCcccccccchhhcccCC--------CEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCH-HHHHHHHH
Confidence 233 3677885 344444333321 1222222211 122577888999999985 22222221 11222222
Q ss_pred cccccccchHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 014863 304 GERGILLGAVHGIVESLFRRFTENGMNEDLAYKNT 338 (417)
Q Consensus 304 geqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~~ 338 (417)
-+.+. ....-+++.-+...+.+.|++.++....+
T Consensus 229 ~~N~~-~a~~ia~~nE~~~la~~~Gid~~~v~~~~ 262 (481)
T 2o3j_A 229 VANAF-LAQRISSINSISAVCEATGAEISEVAHAV 262 (481)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 22221 12223356667777788888888776543
No 102
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.03 E-value=1.6e-09 Score=106.20 Aligned_cols=101 Identities=18% Similarity=0.267 Sum_probs=77.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecC---------CCcCCHHhhhccCCeE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---------GTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d---------~~~~~~~Eav~~ADiV 182 (417)
+||+|||.|+||.++|..|.++ |++|.++ ++ ++..+...+.|..... ....+. +.++++|+|
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~------G~~V~l~-~~-~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~v 90 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARA------GHEVILI-AR-PQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLV 90 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT------TCEEEEE-CC-HHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEE
T ss_pred CcEEEECcCHHHHHHHHHHHHC------CCeEEEE-Ec-HhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEE
Confidence 8999999999999999999999 9998877 54 4445555666654310 002344 346899999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEE-EEeccchh-hhhhc
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFLL-GHLQS 221 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~GaiL-~~a~G~~i-~~~~~ 221 (417)
|++||+....++++++.|+++++++| +...|+.. ..+.+
T Consensus 91 ilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~ 131 (318)
T 3hwr_A 91 LFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENADTLRS 131 (318)
T ss_dssp EECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHH
T ss_pred EEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHH
Confidence 99999999999999999999999865 47789875 34433
No 103
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.02 E-value=7.8e-11 Score=117.36 Aligned_cols=150 Identities=17% Similarity=0.151 Sum_probs=99.4
Q ss_pred hhhccCcccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC
Q 014863 92 YIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (417)
Q Consensus 92 ~~~~~g~~~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~ 171 (417)
..+|+|+|..... ..+.| ++|||||+|+||.++|+.|+.. |++|+++++..... ..+ .+... ..+
T Consensus 123 ~~~~~g~W~~~~~-~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~~~--~~~~~----~~~ 187 (324)
T 3hg7_A 123 EQQKQRLWQSHPY-QGLKG-RTLLILGTGSIGQHIAHTGKHF------GMKVLGVSRSGRER-AGF--DQVYQ----LPA 187 (324)
T ss_dssp HHHHTTCCCCCCC-CCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCC-TTC--SEEEC----GGG
T ss_pred HHHhhCCCcCCCC-ccccc-ceEEEEEECHHHHHHHHHHHhC------CCEEEEEcCChHHh-hhh--hcccc----cCC
Confidence 3467889976544 68999 9999999999999999999988 99988776653221 111 11111 457
Q ss_pred HHhhhccCCeEEEeecchhH-HHHHH-HHHhcCCCCcEEEEec-cch------hhhhhccccCCCCCCcEEEeccCCchh
Q 014863 172 IYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (417)
Q Consensus 172 ~~Eav~~ADiViLavpd~a~-~~Vl~-eI~p~Lk~GaiL~~a~-G~~------i~~~~~~~i~~~~di~VI~v~Pn~pg~ 242 (417)
.+|++++||+|++++|.... ..++. +.+..||+|++|+.++ |-. +..+++..+ -...+||.-..|--+.+
T Consensus 188 l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i-~ga~lDV~~~EPl~~~~ 266 (324)
T 3hg7_A 188 LNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKL-GMAVLDVFEQEPLPADS 266 (324)
T ss_dssp HHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSS-SEEEESCCSSSSCCTTC
T ss_pred HHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCc-eEEEeccCCCCCCCCCC
Confidence 89999999999999996544 44553 6788899999999775 321 222333111 12345666666633222
Q ss_pred hHHHHHhhcccccCCCceEEEeecCC
Q 014863 243 SVRRLYVQGKEINGAGINSSFAVHQD 268 (417)
Q Consensus 243 ~vr~ly~~G~e~~G~Gv~~liav~qd 268 (417)
- ++. --+.+++||--
T Consensus 267 p---L~~--------~~nvilTPHia 281 (324)
T 3hg7_A 267 P---LWG--------QPNLIITPHNS 281 (324)
T ss_dssp T---TTT--------CTTEEECCSCS
T ss_pred h---hhc--------CCCEEEeCCCc
Confidence 1 111 14678888863
No 104
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.01 E-value=9.7e-09 Score=106.27 Aligned_cols=201 Identities=13% Similarity=0.101 Sum_probs=121.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-------------------cC-ceecCCCcCC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-------------------~G-~~~~d~~~~~ 171 (417)
-+|+|||+|.||.++|.+|.+. |++|+++++..++ .+...+ .| +.. ..+
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~------G~~V~~~D~~~~k-v~~l~~g~~~~~epgl~~~~~~~~~~g~l~~----ttd 77 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF------GHEVVCVDKDARK-IELLHQNVMPIYEPGLDALVASNVKAGRLSF----TTD 77 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCSTT-HHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE----ESC
T ss_pred eEEEEEcCCHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHhcCCCCccCCCHHHHHHhhcccCCEEE----ECC
Confidence 6899999999999999999999 9999877766443 333222 12 222 468
Q ss_pred HHhhhccCCeEEEeecch-----------hHHHHHHHHHhcCCCCcEEEEeccchhh-------hhhccccCCCCCCcEE
Q 014863 172 IYETISGSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFPKNIGVI 233 (417)
Q Consensus 172 ~~Eav~~ADiViLavpd~-----------a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~-------~~~~~~i~~~~di~VI 233 (417)
+++++++||+||+|||.. ...++++.|.+++++|++|++.+++... .+.+. ....++ .+
T Consensus 78 ~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~--~~~~d~-~v 154 (446)
T 4a7p_A 78 LAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV--APNSGA-KV 154 (446)
T ss_dssp HHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH--STTSCC-EE
T ss_pred HHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh--CCCCCc-eE
Confidence 889999999999997744 3678889999999999999887765321 12221 111232 45
Q ss_pred EeccCCc--hhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCc--ccccchhhhhhhhcccccccc
Q 014863 234 AVCPKGM--GPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPF--TFATTLEQEYRSDIFGERGIL 309 (417)
Q Consensus 234 ~v~Pn~p--g~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~--~iett~~~E~~~dlfgeqtvL 309 (417)
...|... |..+++... .+.++ +.. .+.++.+.+..++..++... .+..+-....+.--+.+.+.
T Consensus 155 ~~~Pe~a~eG~a~~d~~~---------p~~iv-vG~-~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~- 222 (446)
T 4a7p_A 155 VSNPEFLREGAAIEDFKR---------PDRVV-VGT-EDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAF- 222 (446)
T ss_dssp EECCCCCCTTSHHHHHHS---------CSCEE-EEC-SCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHH-
T ss_pred EeCcccccccchhhhccC---------CCEEE-EeC-CcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHH-
Confidence 6677543 222111111 22222 232 24678888999998877531 11111112222223333332
Q ss_pred cchHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 014863 310 LGAVHGIVESLFRRFTENGMNEDLAYKNT 338 (417)
Q Consensus 310 ~G~~~a~iea~~~~~v~~Gl~~e~A~~~~ 338 (417)
...--+++.-+...+.+.|+++++.+..+
T Consensus 223 ~a~~ia~~nE~~~l~~~~GiD~~~v~~~~ 251 (446)
T 4a7p_A 223 LAVKITFINEIADLCEQVGADVQEVSRGI 251 (446)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 22233356667788889999988776643
No 105
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.00 E-value=6.5e-09 Score=107.46 Aligned_cols=205 Identities=13% Similarity=0.074 Sum_probs=117.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHH---------------HH----cCceecCCCcCC
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA---------------RA----AGFTEENGTLGD 171 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A---------------~~----~G~~~~d~~~~~ 171 (417)
|+||+|||+|.||.++|.+|.+. |.|++|+++++. .+..+.. .+ .++.. ..+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~----g~G~~V~~~d~~-~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~----t~~ 75 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHM----CPEIRVTVVDVN-ESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF----STN 75 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSC-HHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE----ESC
T ss_pred ccEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECC-HHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE----ECC
Confidence 57999999999999999999877 224788766654 3222221 11 23432 457
Q ss_pred HHhhhccCCeEEEeecchh---------------HHHHHHHHHhcCCCCcEEEEeccchhh-------hhhccccCCCCC
Q 014863 172 IYETISGSDLVLLLISDAA---------------QADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFPKN 229 (417)
Q Consensus 172 ~~Eav~~ADiViLavpd~a---------------~~~Vl~eI~p~Lk~GaiL~~a~G~~i~-------~~~~~~i~~~~d 229 (417)
+++++++||+||+|+|... ..++.++|.+++++|++|++.+.+... .+.+ .....
T Consensus 76 ~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~---~~~~~ 152 (467)
T 2q3e_A 76 IDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDA---NTKPN 152 (467)
T ss_dssp HHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHH---TCCTT
T ss_pred HHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHH---hCCCC
Confidence 8889999999999998544 346777899999999988876543211 1222 11122
Q ss_pred Cc-EEEeccCC--chhhHHHHHhhcccccCCCceEEEee-cCCCCHHHHHHHHHHHHHh-CCCcccccchhhhhhhhccc
Q 014863 230 IG-VIAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAV-HQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYRSDIFG 304 (417)
Q Consensus 230 i~-VI~v~Pn~--pg~~vr~ly~~G~e~~G~Gv~~liav-~qd~sgea~e~a~al~~ai-G~~~~iett~~~E~~~dlfg 304 (417)
++ .|...|.. |+..+.+++.- -..++.- ....+.+..+.+..++..+ |...++.+.. ..-+..-+.
T Consensus 153 ~d~~V~~~Pe~~~~G~~~~d~~~~--------~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~-~~ae~~Kl~ 223 (467)
T 2q3e_A 153 LNLQVLSNPEFLAEGTAIKDLKNP--------DRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNT-WSSELSKLA 223 (467)
T ss_dssp CEEEEEECCCCCCTTSHHHHHHSC--------SCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECH-HHHHHHHHH
T ss_pred CCeEEEeCHHHhhcccchhhccCC--------CEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCH-HHHHHHHHH
Confidence 33 34566643 44443333321 1122221 1113567889999999998 5332222211 111111222
Q ss_pred ccccccchHHHHHHHHHHHHHHcCCCHHHHHHH
Q 014863 305 ERGILLGAVHGIVESLFRRFTENGMNEDLAYKN 337 (417)
Q Consensus 305 eqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~~ 337 (417)
+.+. ....-+++.-+...+.+.|+++++....
T Consensus 224 ~N~~-~a~~ia~~nE~~~l~~~~Gid~~~v~~~ 255 (467)
T 2q3e_A 224 ANAF-LAQRISSINSISALCEATGADVEEVATA 255 (467)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHH-HHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 2221 1222335555666777888888766553
No 106
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.98 E-value=2.2e-09 Score=105.10 Aligned_cols=96 Identities=20% Similarity=0.204 Sum_probs=74.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc-CceecC----------CCcCCHHhhhccCC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEEN----------GTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~d----------~~~~~~~Eav~~AD 180 (417)
+||+|||+|.||..+|..|.+. |++|.+.+|..+ ..+...+. |....+ ....+.+++++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~------g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 77 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK------GQSVLAWDIDAQ-RIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDAD 77 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCS
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCHH-HHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCC
Confidence 7999999999999999999998 999877666533 34444443 331100 01457888899999
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEeccc
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G~ 214 (417)
+||+++|+..+.++++++.++++++++|++..|+
T Consensus 78 ~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~~ 111 (359)
T 1bg6_A 78 VILIVVPAIHHASIAANIASYISEGQLIILNPGA 111 (359)
T ss_dssp EEEECSCGGGHHHHHHHHGGGCCTTCEEEESSCC
T ss_pred EEEEeCCchHHHHHHHHHHHhCCCCCEEEEcCCC
Confidence 9999999999999999999999999987777773
No 107
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.98 E-value=8e-10 Score=109.99 Aligned_cols=107 Identities=12% Similarity=0.066 Sum_probs=79.7
Q ss_pred hhhhccCcccccc-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCc
Q 014863 91 EYIVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (417)
Q Consensus 91 e~~~~~g~~~f~~-~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~ 169 (417)
...+|+|+|.... ....+.| ++|||||+|+||.++|+.++.. |++|+++++...+. +.+ ++.. .
T Consensus 126 ~~~~~~g~w~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~~~-~~~~----~ 190 (333)
T 1j4a_A 126 DEKVARHDLRWAPTIGREVRD-QVVGVVGTGHIGQVFMQIMEGF------GAKVITYDIFRNPE---LEK-KGYY----V 190 (333)
T ss_dssp HHHHHTTBCCCTTCCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCHH---HHH-TTCB----C
T ss_pred HHHHHcCCCccCCcccccCCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcchh---HHh-hCee----c
Confidence 3456778774322 2367999 9999999999999999999988 99988776654332 222 3332 3
Q ss_pred CCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 170 GDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 170 ~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
.+.++++++||+|++++|.... ..++ ++..+.||+|++|+.++
T Consensus 191 ~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~a 235 (333)
T 1j4a_A 191 DSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVS 235 (333)
T ss_dssp SCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECS
T ss_pred CCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECC
Confidence 3789999999999999997654 4556 45778899999988664
No 108
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.97 E-value=5.2e-10 Score=114.42 Aligned_cols=160 Identities=19% Similarity=0.132 Sum_probs=97.6
Q ss_pred hhhhccCcccccc-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCc
Q 014863 91 EYIVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (417)
Q Consensus 91 e~~~~~g~~~f~~-~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~ 169 (417)
...+|+|+|.... ....+.| |||||||+|+||..+|+.++.. |++|+++++..... ..++.. +
T Consensus 125 ~~~~~~g~W~~~~~~~~el~g-ktlGiIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~~-----~~~~~~----~ 188 (404)
T 1sc6_A 125 NAKAHRGVGNKLAAGSFEARG-KKLGIIGYGHIGTQLGILAESL------GMYVYFYDIENKLP-----LGNATQ----V 188 (404)
T ss_dssp HHHHHHTCCC-----CCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCC-----CTTCEE----C
T ss_pred HHHHHcCCccccCCCccccCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEEcCCchhc-----cCCcee----c
Confidence 3456788886432 2368999 9999999999999999999988 99987776643321 112332 4
Q ss_pred CCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec-cc--h----hhhhhccccCCCCCCcEEEeccCCc
Q 014863 170 GDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GF--L----LGHLQSMGLDFPKNIGVIAVCPKGM 240 (417)
Q Consensus 170 ~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~-G~--~----i~~~~~~~i~~~~di~VI~v~Pn~p 240 (417)
.+++|++++||+|++++|.... ..++ ++.+..||+|++|+.++ |- . ...+++..+ -...+||...+|..+
T Consensus 189 ~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i-~gA~lDVf~~EP~~~ 267 (404)
T 1sc6_A 189 QHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHL-AGAAIDVFPTEPATN 267 (404)
T ss_dssp SCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSE-EEEEEEC--------
T ss_pred CCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCc-cEEEEeecCCCCCCc
Confidence 5899999999999999998754 4566 46788999999998665 32 1 122222111 112457787888542
Q ss_pred hhh-HHHHHhhcccccCCCceEEEeecCC-CCHHHHH
Q 014863 241 GPS-VRRLYVQGKEINGAGINSSFAVHQD-VDGRATN 275 (417)
Q Consensus 241 g~~-vr~ly~~G~e~~G~Gv~~liav~qd-~sgea~e 275 (417)
... ...++. --+.+++||-. .|.++.+
T Consensus 268 ~~~~~~pL~~--------~~nvilTPHi~~~T~ea~~ 296 (404)
T 1sc6_A 268 SDPFTSPLAE--------FDNVLLTPHIGGSTQEAQE 296 (404)
T ss_dssp -CTTTGGGTT--------CTTEEEECCCSCCSHHHHH
T ss_pred cccccchhhc--------CCCEEECCCCCCCcHHHHH
Confidence 210 001121 24778999874 3445443
No 109
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.97 E-value=5.3e-10 Score=112.14 Aligned_cols=104 Identities=19% Similarity=0.120 Sum_probs=78.3
Q ss_pred hhc-cCcccc--cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCc
Q 014863 93 IVR-GGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL 169 (417)
Q Consensus 93 ~~~-~g~~~f--~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~ 169 (417)
.+| +|+|.. ......+.| ++|||||+|.||.++|+.|+.. |++|+++++...+ ..+.+.. .
T Consensus 128 ~~~~~g~~~w~~~~~~~~l~g-ktvgIiGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~----~~~~~~~-----~ 191 (343)
T 2yq5_A 128 RMDHDHDFTWPSNLISNEIYN-LTVGLIGVGHIGSAVAEIFSAM------GAKVIAYDVAYNP----EFEPFLT-----Y 191 (343)
T ss_dssp HHHHHCCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCG----GGTTTCE-----E
T ss_pred HHHHcCCcccccCCCccccCC-CeEEEEecCHHHHHHHHHHhhC------CCEEEEECCChhh----hhhcccc-----c
Confidence 345 565433 223478999 9999999999999999999988 9998877765432 1223443 3
Q ss_pred CCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 170 GDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 170 ~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
.+.+|++++||+|++++|.... ..++ .+.+..||+|++|+.++
T Consensus 192 ~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 236 (343)
T 2yq5_A 192 TDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCA 236 (343)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred cCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECC
Confidence 4899999999999999996544 3455 46788899999999775
No 110
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.96 E-value=9.9e-09 Score=105.93 Aligned_cols=195 Identities=11% Similarity=0.076 Sum_probs=113.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH------------------cCceecCCCcCCHH
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA------------------AGFTEENGTLGDIY 173 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~------------------~G~~~~d~~~~~~~ 173 (417)
|||+|||+|.||.++|..|. . |++|+++++. +...+...+ .++.. ..+++
T Consensus 37 mkIaVIGlG~mG~~lA~~La-~------G~~V~~~D~~-~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~----ttd~~ 104 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIA-Q------NHEVVALDIV-QAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA----TTDKH 104 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSC-HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE----ESCHH
T ss_pred CEEEEECcCHHHHHHHHHHH-c------CCeEEEEecC-HHHhhHHhccCCccccccHHHHHhhccCCeEE----EcCHH
Confidence 89999999999999999886 4 7888766654 333333322 12332 46788
Q ss_pred hhhccCCeEEEeecch-----------hHHHHHHHHHhcCCCCcEEEEeccchhh---hhhccccCCCCCCcEEEeccCC
Q 014863 174 ETISGSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKG 239 (417)
Q Consensus 174 Eav~~ADiViLavpd~-----------a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~---~~~~~~i~~~~di~VI~v~Pn~ 239 (417)
+++++||+||+++|.. ...++++.|.+ +++|++|++.+.+... .+.+ .+.+ ..+...|-.
T Consensus 105 ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~---~l~~--~~v~~sPe~ 178 (432)
T 3pid_A 105 DAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKE---RLGI--DNVIFSPEF 178 (432)
T ss_dssp HHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHH---HHTC--CCEEECCCC
T ss_pred HHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHH---HHhh--ccEeecCcc
Confidence 9999999999999975 35678888999 9999999887765422 2221 1222 234457732
Q ss_pred --chhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHH--hCCC-cccccchhhhhhhhcccccccccchHH
Q 014863 240 --MGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVA--LGSP-FTFATTLEQEYRSDIFGERGILLGAVH 314 (417)
Q Consensus 240 --pg~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~a--iG~~-~~iett~~~E~~~dlfgeqtvL~G~~~ 314 (417)
|+....+... .+. |.+.. +.+..+.+..++.. ++.. .++.+.. .+-+.--+-+.+ +...--
T Consensus 179 ~~~G~A~~~~l~---------p~r-IvvG~--~~~~~~~~~~ll~~~~~~~~~~v~~~~~-~~AE~~Kl~~N~-~~a~~I 244 (432)
T 3pid_A 179 LREGRALYDNLH---------PSR-IVIGE--RSARAERFADLLKEGAIKQDIPTLFTDS-TEAEAIKLFANT-YLALRV 244 (432)
T ss_dssp CCTTSHHHHHHS---------CSC-EEESS--CSHHHHHHHHHHHHHCSSSSCCEEECCH-HHHHHHHHHHHH-HHHHHH
T ss_pred CCcchhhhcccC---------Cce-EEecC--CHHHHHHHHHHHHhhhccCCCeEEecCc-cHHHHHHHHHHH-HHHHHH
Confidence 3333322211 112 22333 23455666777765 4432 1222221 111222222332 222233
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHH
Q 014863 315 GIVESLFRRFTENGMNEDLAYKNT 338 (417)
Q Consensus 315 a~iea~~~~~v~~Gl~~e~A~~~~ 338 (417)
+++.-+...+.+.|++.++.+..+
T Consensus 245 a~~nEl~~lae~~GiD~~~v~~~~ 268 (432)
T 3pid_A 245 AYFNELDSYAESQGLNSKQIIEGV 268 (432)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 355556777788888887766643
No 111
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.94 E-value=1.1e-09 Score=112.58 Aligned_cols=160 Identities=18% Similarity=0.141 Sum_probs=101.6
Q ss_pred hhhccCcccccc-cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcC
Q 014863 92 YIVRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (417)
Q Consensus 92 ~~~~~g~~~f~~-~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~ 170 (417)
..+|+|+|.... ....+.| ++|||||+|+||.++|+.++.. |++|+++++..... ..+... ..
T Consensus 137 ~~~~~g~W~~~~~~~~el~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~yd~~~~~~-----~~~~~~----~~ 200 (416)
T 3k5p_A 137 VSAHAGGWEKTAIGSREVRG-KTLGIVGYGNIGSQVGNLAESL------GMTVRYYDTSDKLQ-----YGNVKP----AA 200 (416)
T ss_dssp HHHHTTCCCCCCTTCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCCCC-----BTTBEE----CS
T ss_pred HhhhcccccccCCCCccCCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCcchhc-----ccCcEe----cC
Confidence 346788996543 2468999 9999999999999999999988 99987776542211 123332 56
Q ss_pred CHHhhhccCCeEEEeecchhHH-HHH-HHHHhcCCCCcEEEEec-cch------hhhhhccccCCCCCCcEEEeccCCch
Q 014863 171 DIYETISGSDLVLLLISDAAQA-DNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMG 241 (417)
Q Consensus 171 ~~~Eav~~ADiViLavpd~a~~-~Vl-~eI~p~Lk~GaiL~~a~-G~~------i~~~~~~~i~~~~di~VI~v~Pn~pg 241 (417)
+.+|++++||+|++++|..... .++ ++.+..||+|++|+.++ |-. ...+++..+ -...+||.-..|..+.
T Consensus 201 sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i-~gAalDVf~~EP~~~~ 279 (416)
T 3k5p_A 201 SLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHL-AGAAIDVFPVEPASNG 279 (416)
T ss_dssp SHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSE-EEEEECCCSSCCSSTT
T ss_pred CHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCc-cEEEeCCCCCCCCCcc
Confidence 8999999999999999986654 455 46788999999998664 321 122332111 1234555556664432
Q ss_pred hhH-HHHHhhcccccCCCceEEEeecC-CCCHHHHHH
Q 014863 242 PSV-RRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (417)
Q Consensus 242 ~~v-r~ly~~G~e~~G~Gv~~liav~q-d~sgea~e~ 276 (417)
... ..++ .--+.+++||- ..|.++.+.
T Consensus 280 ~~~~~pL~--------~~~nvilTPHig~~T~ea~~~ 308 (416)
T 3k5p_A 280 ERFSTPLQ--------GLENVILTPHIGGSTEEAQER 308 (416)
T ss_dssp SCCCCTTT--------TCTTEEECCSCTTCCHHHHHH
T ss_pred cccchhHh--------cCCCEEECCCCCCCCHHHHHH
Confidence 100 0011 11367899994 456665543
No 112
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.92 E-value=1e-09 Score=109.13 Aligned_cols=106 Identities=15% Similarity=0.086 Sum_probs=80.1
Q ss_pred hhhhccCcccc--cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCC
Q 014863 91 EYIVRGGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (417)
Q Consensus 91 e~~~~~g~~~f--~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~ 168 (417)
...+|+|+|.. ......+.| ++|||||+|.||.++|+.|+.. |++|+++++...+. + +.++.
T Consensus 125 ~~~~~~g~w~~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~-~~~~~----- 188 (331)
T 1xdw_A 125 TSRTAKKNFKVDAFMFSKEVRN-CTVGVVGLGRIGRVAAQIFHGM------GATVIGEDVFEIKG---I-EDYCT----- 188 (331)
T ss_dssp HHHHTTTCCCCCSTTCCCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCS---C-TTTCE-----
T ss_pred HHHHHcCCCccccCcCccCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCccHH---H-Hhccc-----
Confidence 34567788753 122367999 9999999999999999999988 99988777654332 1 12333
Q ss_pred cCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 169 LGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 169 ~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
..+.++++++||+|++++|.... ..++ ++..+.||+|++|+.++
T Consensus 189 ~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~s 234 (331)
T 1xdw_A 189 QVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCA 234 (331)
T ss_dssp ECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECS
T ss_pred cCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECC
Confidence 35889999999999999997644 3556 46788899999988665
No 113
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.91 E-value=1e-09 Score=109.33 Aligned_cols=106 Identities=17% Similarity=0.206 Sum_probs=80.0
Q ss_pred hhhhccCcccc--cccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCC
Q 014863 91 EYIVRGGRDLF--NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT 168 (417)
Q Consensus 91 e~~~~~g~~~f--~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~ 168 (417)
...+|+|+|.. ......+.| ++|||||+|.||.++|+.++.. |++|+++++...+. + +.++.
T Consensus 124 ~~~~~~g~w~~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~-~~~~~----- 187 (333)
T 1dxy_A 124 QAQLQAGDYEKAGTFIGKELGQ-QTVGVMGTGHIGQVAIKLFKGF------GAKVIAYDPYPMKG---D-HPDFD----- 187 (333)
T ss_dssp HHHHHTTCHHHHTCCCCCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSS---C-CTTCE-----
T ss_pred HHHHHcCCcccccCCCccCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCcchh---h-Hhccc-----
Confidence 34567788743 222368999 9999999999999999999988 99988776654332 1 12233
Q ss_pred cCCHHhhhccCCeEEEeecchhH-HHHH-HHHHhcCCCCcEEEEec
Q 014863 169 LGDIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 169 ~~~~~Eav~~ADiViLavpd~a~-~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
..+.+|++++||+|++++|.... ..++ ++.++.||+|++|+.++
T Consensus 188 ~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~s 233 (333)
T 1dxy_A 188 YVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTA 233 (333)
T ss_dssp ECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred cCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECC
Confidence 34889999999999999997664 4566 46788899999988664
No 114
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.89 E-value=5.5e-08 Score=96.66 Aligned_cols=151 Identities=13% Similarity=0.149 Sum_probs=113.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHH-----------HHHHcCceecC----------CCcC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFA-----------EARAAGFTEEN----------GTLG 170 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~-----------~A~~~G~~~~d----------~~~~ 170 (417)
.||+|||.|.||..+|..+..+ |++|++.+... +..+ ...+.|..... ..+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~------G~~V~l~D~~~-~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~ 79 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEP-RQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCT 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCH-HHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEEC
T ss_pred CeEEEECCcHHHHHHHHHHHhC------CCeEEEEECCH-HHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccccc
Confidence 7999999999999999999999 99998876542 2222 22223322100 0145
Q ss_pred CHHhhhccCCeEEEeecchhH--HHHHHHHHhcCCCCcEEE-EeccchhhhhhccccCCCCCCcEEEeccCCchhhHHHH
Q 014863 171 DIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (417)
Q Consensus 171 ~~~Eav~~ADiViLavpd~a~--~~Vl~eI~p~Lk~GaiL~-~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~l 247 (417)
+++|++++||+|+=++|-... .+++.+|-++++++++|. -++++.+..+.+ .....-+|+..||--|.+.+
T Consensus 80 ~l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~---~~~~p~r~ig~HffNP~~~m--- 153 (319)
T 3ado_A 80 NLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT---GLAHVKQCIVAHPVNPPYYI--- 153 (319)
T ss_dssp CHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT---TCTTGGGEEEEEECSSTTTC---
T ss_pred chHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhh---hccCCCcEEEecCCCCcccc---
Confidence 788999999999999996555 369999999999999875 667888887765 22233489999998888873
Q ss_pred HhhcccccCCCceE-EEeecCCCCHHHHHHHHHHHHHhCCC
Q 014863 248 YVQGKEINGAGINS-SFAVHQDVDGRATNVALGWSVALGSP 287 (417)
Q Consensus 248 y~~G~e~~G~Gv~~-liav~qd~sgea~e~a~al~~aiG~~ 287 (417)
+. =|.++...+.+..+.+.++...+|..
T Consensus 154 ------------~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~ 182 (319)
T 3ado_A 154 ------------PLVELVPHPETSPATVDRTHALMRKIGQS 182 (319)
T ss_dssp ------------CEEEEEECTTCCHHHHHHHHHHHHHTTCE
T ss_pred ------------chHHhcCCCCCcHHHHHHHHHHHHHhCCc
Confidence 32 13458889999999999999999964
No 115
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.84 E-value=6.5e-08 Score=98.23 Aligned_cols=91 Identities=13% Similarity=0.053 Sum_probs=66.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec------------C--CCcCCHHhhhc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE------------N--GTLGDIYETIS 177 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~------------d--~~~~~~~Eav~ 177 (417)
|||+|||+|.||.++|.+|.+ |++|++.++. .+..+...+.|.... . ....+..++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-------G~~V~~~d~~-~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~ 72 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-------QNEVTIVDIL-PSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYK 72 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEECSC-HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-------CCEEEEEECC-HHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhc
Confidence 589999999999999999853 6787766554 333444444343100 0 01346778899
Q ss_pred cCCeEEEeecch-----------hHHHHHHHHHhcCCCCcEEEEe
Q 014863 178 GSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 178 ~ADiViLavpd~-----------a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
++|+||+++|+. ...+++++|.+ +++|++|++.
T Consensus 73 ~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ 116 (402)
T 1dlj_A 73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIK 116 (402)
T ss_dssp HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEEC
T ss_pred CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEe
Confidence 999999999987 46788889999 9999988873
No 116
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.81 E-value=6.7e-09 Score=104.49 Aligned_cols=94 Identities=18% Similarity=0.227 Sum_probs=70.9
Q ss_pred CCEEEEEcccchHHHHHHHHHh-hhhhhcCCceEEEEe---cCCchhHHHH-HHcCceec----CC-----------CcC
Q 014863 111 INQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGL---RKGSRSFAEA-RAAGFTEE----NG-----------TLG 170 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~-s~~~~~~G~~Vivg~---r~~~~s~~~A-~~~G~~~~----d~-----------~~~ 170 (417)
||||+|||.|+||.++|..|.. . |++|.++. +. .+..+.+ .+.|.... ++ ...
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~------G~~V~~~~~~~r~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 74 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD------GVEVRVLTLFADE-AERWTKALGADELTVIVNEKDGTQTEVKSRPKVITK 74 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST------TEEEEEECCSTTH-HHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEES
T ss_pred CceEEEECCCHHHHHHHHHHHhCC------CCEEEEEeCCCCc-HHHHHHHHhhccceeeeecCCCccceeeccceEEeC
Confidence 3799999999999999999976 7 88888776 32 3334442 23331100 00 235
Q ss_pred CHHhhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 171 DIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 171 ~~~Eav~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+++++++++|+||++||+....+++++|.|+++++++|+..
T Consensus 75 ~~~~a~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 75 DPEIAISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGL 115 (404)
T ss_dssp CHHHHHTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEET
T ss_pred CHHHHhCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEc
Confidence 67888999999999999999999999999999999887763
No 117
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.79 E-value=1.8e-08 Score=98.41 Aligned_cols=111 Identities=21% Similarity=0.147 Sum_probs=79.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCC------cCCHHhhhccCCeEEEe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT------LGDIYETISGSDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~------~~~~~Eav~~ADiViLa 185 (417)
|||+|||.|+||.++|..|. + |.+|.+..|.. ...+...+.|+...... .....+++..+|+||++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~------g~~V~~~~r~~-~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vila 74 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L------YHDVTVVTRRQ-EQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVT 74 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH-HHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHh-c------CCceEEEECCH-HHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEE
Confidence 79999999999999999999 8 99988877653 33445555687642000 00013467789999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEEeccchhh-hhhccccCCCCCCcEEEe
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILGLSHGFLLG-HLQSMGLDFPKNIGVIAV 235 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~-~~~~~~i~~~~di~VI~v 235 (417)
||+++..++++++.+. .++++|++..|+... .+.+ .+|.+ +++..
T Consensus 75 vK~~~~~~~l~~l~~~-~~~~ivs~~nGi~~~e~l~~---~~~~~-~vl~g 120 (307)
T 3ego_A 75 VKQHQLQSVFSSLERI-GKTNILFLQNGMGHIHDLKD---WHVGH-SIYVG 120 (307)
T ss_dssp CCGGGHHHHHHHTTSS-CCCEEEECCSSSHHHHHHHT---CCCSC-EEEEE
T ss_pred eCHHHHHHHHHHhhcC-CCCeEEEecCCccHHHHHHH---hCCCC-cEEEE
Confidence 9999999999999875 566666788999864 4544 44443 44433
No 118
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.78 E-value=1e-07 Score=99.52 Aligned_cols=202 Identities=19% Similarity=0.169 Sum_probs=119.5
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCch---hHHHHHH---------------------cCceec
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSR---SFAEARA---------------------AGFTEE 165 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~---s~~~A~~---------------------~G~~~~ 165 (417)
++||+|||+|.||.++|.+|.+. .|+ +|+++++...+ ..+...+ .|-..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~-----~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~- 91 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA-----PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFE- 91 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS-----TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEE-
T ss_pred CCEEEEECcCHHHHHHHHHHHHh-----CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeE-
Confidence 48999999999999999999765 268 88877665440 2222211 22111
Q ss_pred CCCcCCHHhhhccCCeEEEeecchh------------HHHHHHHHHhcCCCCcEEEEeccchhhh--------h-hcccc
Q 014863 166 NGTLGDIYETISGSDLVLLLISDAA------------QADNYEKIFSCMKPNSILGLSHGFLLGH--------L-QSMGL 224 (417)
Q Consensus 166 d~~~~~~~Eav~~ADiViLavpd~a------------~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~--------~-~~~~i 224 (417)
...+ .+++++||+||+++|... ...+.+.|.+++++|++|++.+++.... + +..+.
T Consensus 92 --~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~ 168 (478)
T 3g79_A 92 --CTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGL 168 (478)
T ss_dssp --EESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCC
T ss_pred --EeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCC
Confidence 0234 788999999999998653 3456678999999999998877653211 1 11121
Q ss_pred CCCCCCcEEEeccC--CchhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHh-CCCcccccchhhhhhhh
Q 014863 225 DFPKNIGVIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYRSD 301 (417)
Q Consensus 225 ~~~~di~VI~v~Pn--~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~ai-G~~~~iett~~~E~~~d 301 (417)
....++ .+.-.|. .||..+.+... .+.++ ... +.+..+.+..++..+ +...+..++. ..-+.-
T Consensus 169 ~~~~d~-~v~~~Pe~~~~G~a~~~~~~---------~~~Iv-~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~-~~aE~~ 234 (478)
T 3g79_A 169 KAGEDF-ALAHAPERVMVGRLLKNIRE---------HDRIV-GGI--DEASTKRAVELYSPVLTVGQVIPMSA-TAAEVT 234 (478)
T ss_dssp CBTTTB-EEEECCCCCCTTSHHHHHHH---------SCEEE-EES--SHHHHHHHHHHHGGGCSSCCEEEEEH-HHHHHH
T ss_pred CcCCce-eEEeCCccCCccchhhhhcC---------CcEEE-EeC--CHHHHHHHHHHHhhhccCCeEEeCCH-HHHHHH
Confidence 111222 4667774 34544332222 22333 232 467779999999999 6542222221 222222
Q ss_pred cccccccccchHHHHHHHHHHHHHHcCCCHHHHHH
Q 014863 302 IFGERGILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (417)
Q Consensus 302 lfgeqtvL~G~~~a~iea~~~~~v~~Gl~~e~A~~ 336 (417)
-+-+++ +.+.--+++.-+...+.+.|++.++.+.
T Consensus 235 Kl~~N~-~~a~~Ia~~nE~~~l~e~~GiD~~~v~~ 268 (478)
T 3g79_A 235 KTAENT-FRDLQIAAINQLALYCEAMGINVYDVRT 268 (478)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 222332 2223333566677788889999887766
No 119
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.78 E-value=2e-08 Score=104.62 Aligned_cols=94 Identities=16% Similarity=0.094 Sum_probs=74.2
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc-------C-------------ceecCCCc
Q 014863 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------G-------------FTEENGTL 169 (417)
Q Consensus 110 g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~-------G-------------~~~~d~~~ 169 (417)
|-+||+|||+|.||.++|..|.+. |++|+++++. .+..+...+. | +.. .
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~------G~~V~~~d~~-~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~----t 75 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI------GHDVFCLDVD-QAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF----S 75 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----E
T ss_pred CCceEEEECcCHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE----E
Confidence 448999999999999999999999 9998766654 3334444332 1 121 3
Q ss_pred CCHHhhhccCCeEEEeecc----------hhHHHHHHHHHhcCCCCcEEEEeccc
Q 014863 170 GDIYETISGSDLVLLLISD----------AAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 170 ~~~~Eav~~ADiViLavpd----------~a~~~Vl~eI~p~Lk~GaiL~~a~G~ 214 (417)
.++++++++||+||+|||. ....+++++|.+++++|++|++.+++
T Consensus 76 td~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv 130 (478)
T 2y0c_A 76 TDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTV 130 (478)
T ss_dssp CCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCC
T ss_pred CCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCc
Confidence 5677889999999999997 77788999999999999998877765
No 120
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.74 E-value=1.9e-08 Score=88.20 Aligned_cols=114 Identities=7% Similarity=-0.043 Sum_probs=80.2
Q ss_pred ccCCCCEEEEEcc----cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeE
Q 014863 107 AFNGINQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 107 ~l~g~kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiV 182 (417)
.++- ++|+|||. |+||..++++|++. |++|+..+....+ -.|... ..+++|+.+..|++
T Consensus 11 l~~p-~~IavIGaS~~~g~~G~~~~~~L~~~------G~~V~~vnp~~~~------i~G~~~----~~s~~el~~~vDlv 73 (138)
T 1y81_A 11 SKEF-RKIALVGASKNPAKYGNIILKDLLSK------GFEVLPVNPNYDE------IEGLKC----YRSVRELPKDVDVI 73 (138)
T ss_dssp ---C-CEEEEETCCSCTTSHHHHHHHHHHHT------TCEEEEECTTCSE------ETTEEC----BSSGGGSCTTCCEE
T ss_pred ccCC-CeEEEEeecCCCCCHHHHHHHHHHHC------CCEEEEeCCCCCe------ECCeee----cCCHHHhCCCCCEE
Confidence 3444 89999999 99999999999999 9985544433211 157764 56889988899999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCCCCCcEEEeccCCchhh
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~ 243 (417)
++++|+..+.++++++.. ...+.++.+.+++.-...+. .-..++++ +.||+++-.
T Consensus 74 ii~vp~~~v~~v~~~~~~-~g~~~i~~~~~~~~~~l~~~---a~~~Gi~~--igpnc~g~~ 128 (138)
T 1y81_A 74 VFVVPPKVGLQVAKEAVE-AGFKKLWFQPGAESEEIRRF---LEKAGVEY--SFGRCIMVE 128 (138)
T ss_dssp EECSCHHHHHHHHHHHHH-TTCCEEEECTTSCCHHHHHH---HHHHTCEE--ECSCCHHHH
T ss_pred EEEeCHHHHHHHHHHHHH-cCCCEEEEcCccHHHHHHHH---HHHCCCEE--EcCCcceEE
Confidence 999999999999988766 45566777777664222111 10124454 569998876
No 121
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.74 E-value=5.1e-09 Score=106.41 Aligned_cols=138 Identities=16% Similarity=0.111 Sum_probs=92.1
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
..+.| ++|||||+|+||.++|+.|+.. |++|+++++.. .. ...|.. ..+.+|++++||+|+++
T Consensus 112 ~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~----~~-~~~g~~-----~~~l~ell~~aDvV~l~ 174 (380)
T 2o4c_A 112 ADLAE-RTYGVVGAGQVGGRLVEVLRGL------GWKVLVCDPPR----QA-REPDGE-----FVSLERLLAEADVISLH 174 (380)
T ss_dssp CCGGG-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECHHH----HH-HSTTSC-----CCCHHHHHHHCSEEEEC
T ss_pred cccCC-CEEEEEeCCHHHHHHHHHHHHC------CCEEEEEcCCh----hh-hccCcc-----cCCHHHHHHhCCEEEEe
Confidence 46889 9999999999999999999988 99987665431 11 123433 46899999999999999
Q ss_pred ecchhH-----HHHH-HHHHhcCCCCcEEEEec-cch------hhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcc
Q 014863 186 ISDAAQ-----ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK 252 (417)
Q Consensus 186 vpd~a~-----~~Vl-~eI~p~Lk~GaiL~~a~-G~~------i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~ 252 (417)
+|.... ..++ +++.+.||+|++|+.++ |-. +..+++.. .....+||.-..|....+ ++.
T Consensus 175 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~-i~~A~LDV~~~EP~~~~~----l~~--- 246 (380)
T 2o4c_A 175 TPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGA-DLEVALDVWEGEPQADPE----LAA--- 246 (380)
T ss_dssp CCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTC-CEEEEESCCTTTTSCCHH----HHT---
T ss_pred ccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCC-CceEEeeeeccCCCCchh----hcc---
Confidence 997764 4556 46888999999988664 321 11222211 112345666667743222 231
Q ss_pred cccCCCceEEEeecC-CCCHHHH
Q 014863 253 EINGAGINSSFAVHQ-DVDGRAT 274 (417)
Q Consensus 253 e~~G~Gv~~liav~q-d~sgea~ 274 (417)
.+.+++||- ..|.++.
T Consensus 247 ------~nvi~TPHiag~t~e~~ 263 (380)
T 2o4c_A 247 ------RCLIATPHIAGYSLEGK 263 (380)
T ss_dssp ------TCSEECSSCTTCCHHHH
T ss_pred ------CCEEEccccCcCCHHHH
Confidence 355788986 3454543
No 122
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.71 E-value=2.4e-07 Score=95.55 Aligned_cols=202 Identities=11% Similarity=0.105 Sum_probs=118.1
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhh-------------
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYET------------- 175 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Ea------------- 175 (417)
.| .|+.|||+|.||.++|.+|.+. |++|+++++. .+..+... .|..+.. ....+|+
T Consensus 10 ~~-~~~~ViGlGyvGlp~A~~La~~------G~~V~~~D~~-~~kv~~L~-~g~~pi~--epgl~~ll~~~~~~g~l~~t 78 (431)
T 3ojo_A 10 HG-SKLTVVGLGYIGLPTSIMFAKH------GVDVLGVDIN-QQTIDKLQ-NGQISIE--EPGLQEVYEEVLSSGKLKVS 78 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHH-TTCCSSC--CTTHHHHHHHHHHTTCEEEE
T ss_pred cC-CccEEEeeCHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHH-CCCCCcC--CCCHHHHHHhhcccCceEEe
Confidence 46 8999999999999999999999 9998776665 33333332 2321100 0011111
Q ss_pred --hccCCeEEEeecchh------------HHHHHHHHHhcCCCCcEEEEeccchhh---hh-----hccccCCCCCCcEE
Q 014863 176 --ISGSDLVLLLISDAA------------QADNYEKIFSCMKPNSILGLSHGFLLG---HL-----QSMGLDFPKNIGVI 233 (417)
Q Consensus 176 --v~~ADiViLavpd~a------------~~~Vl~eI~p~Lk~GaiL~~a~G~~i~---~~-----~~~~i~~~~di~VI 233 (417)
+++||+||+|||... ...+.+.|.++|++|++|++.+++... .+ ++.+.....++ .+
T Consensus 79 td~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~-~v 157 (431)
T 3ojo_A 79 TTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDI-YL 157 (431)
T ss_dssp SSCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTE-EE
T ss_pred CchhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCe-EE
Confidence 458999999999665 345667899999999998888766421 11 11111111222 45
Q ss_pred Eecc--CCchhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccc
Q 014863 234 AVCP--KGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLG 311 (417)
Q Consensus 234 ~v~P--n~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G 311 (417)
...| -.||....+... .+.++ ... +.++.+.+..++..++...++.++. ..-+.--+-+++. .+
T Consensus 158 ~~~Pe~~~~G~A~~~~~~---------p~~Iv-~G~--~~~~~~~~~~ly~~~~~~~~~~~~~-~~AE~~Kl~~N~~-~a 223 (431)
T 3ojo_A 158 VHCPERVLPGKILEELVH---------NNRII-GGV--TKACIEAGKRVYRTFVQGEMIETDA-RTAEMSKLMENTY-RD 223 (431)
T ss_dssp EECCCCCCTTSHHHHHHH---------SCEEE-EES--SHHHHHHHHHHHTTTCCSCEEEEEH-HHHHHHHHHHHHH-HH
T ss_pred EECCCcCCCcchhhcccC---------CCEEE-EeC--CHHHHHHHHHHHHHHhCCcEEeCCH-HHHHHHHHHHHHH-HH
Confidence 6677 334444332221 23433 233 5788999999999998643332322 2222222223332 22
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHH
Q 014863 312 AVHGIVESLFRRFTENGMNEDLAYK 336 (417)
Q Consensus 312 ~~~a~iea~~~~~v~~Gl~~e~A~~ 336 (417)
.--+++.-+...+.+.|++.++...
T Consensus 224 ~~Ia~~nE~~~l~e~~GiD~~~v~~ 248 (431)
T 3ojo_A 224 VNIALANELTKICNNLNINVLDVIE 248 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 2333566677778888888877665
No 123
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.70 E-value=8e-09 Score=99.53 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=72.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEee
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLav 186 (417)
.++| ++|+|||+|.||.+++.+|.+. |.+|.+.+|+.++..+.+.+.|+.. ..+..++++++|+||++|
T Consensus 126 ~~~~-~~v~iiGaG~~g~aia~~L~~~------g~~V~v~~r~~~~~~~l~~~~g~~~----~~~~~~~~~~aDiVi~at 194 (275)
T 2hk9_A 126 EVKE-KSILVLGAGGASRAVIYALVKE------GAKVFLWNRTKEKAIKLAQKFPLEV----VNSPEEVIDKVQVIVNTT 194 (275)
T ss_dssp TGGG-SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSHHHHHHHTTTSCEEE----CSCGGGTGGGCSEEEECS
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHc------CCEEEEEECCHHHHHHHHHHcCCee----ehhHHhhhcCCCEEEEeC
Confidence 4678 9999999999999999999998 8888888776444444554556553 347788899999999999
Q ss_pred cchhHHHHHHHH-HhcCCCCcEEEEecc
Q 014863 187 SDAAQADNYEKI-FSCMKPNSILGLSHG 213 (417)
Q Consensus 187 pd~a~~~Vl~eI-~p~Lk~GaiL~~a~G 213 (417)
|+....++...+ .+.+++|++|+++..
T Consensus 195 p~~~~~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 195 SVGLKDEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp STTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 988654221112 356788988886654
No 124
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.69 E-value=8.1e-09 Score=105.01 Aligned_cols=151 Identities=17% Similarity=0.115 Sum_probs=98.5
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
..+.| ++|||||+|+||.++|+.|+.. |++|+++++. .+. ...+.. ..+.+|++++||+|+++
T Consensus 115 ~~l~g-ktvGIIGlG~IG~~vA~~l~a~------G~~V~~~d~~----~~~-~~~~~~-----~~sl~ell~~aDiV~l~ 177 (381)
T 3oet_A 115 FSLRD-RTIGIVGVGNVGSRLQTRLEAL------GIRTLLCDPP----RAA-RGDEGD-----FRTLDELVQEADVLTFH 177 (381)
T ss_dssp CCGGG-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECHH----HHH-TTCCSC-----BCCHHHHHHHCSEEEEC
T ss_pred CccCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCC----hHH-hccCcc-----cCCHHHHHhhCCEEEEc
Confidence 46788 9999999999999999999988 9998776542 111 112322 56899999999999999
Q ss_pred ecchhH-----HHHH-HHHHhcCCCCcEEEEec-cch------hhhhhccccCCCCCCcEEEeccCCchhhHHHHHhhcc
Q 014863 186 ISDAAQ-----ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK 252 (417)
Q Consensus 186 vpd~a~-----~~Vl-~eI~p~Lk~GaiL~~a~-G~~------i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly~~G~ 252 (417)
+|.... ..++ .+.+..||+|++|+.++ |-. +..+++.. .....+||.--.|.-+. .++..
T Consensus 178 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~-i~gA~LDV~e~EP~~~~----~L~~~-- 250 (381)
T 3oet_A 178 TPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQ-PLSVVLDVWEGEPDLNV----ALLEA-- 250 (381)
T ss_dssp CCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTC-CEEEEESCCTTTTSCCH----HHHHH--
T ss_pred CcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCC-CeEEEeeccccCCCCcc----hhhhC--
Confidence 996654 3455 46778899999999775 321 22233211 11235567666774332 24432
Q ss_pred cccCCCceEEEeecC-CCCHHHHHH-----HHHHHHHhCCC
Q 014863 253 EINGAGINSSFAVHQ-DVDGRATNV-----ALGWSVALGSP 287 (417)
Q Consensus 253 e~~G~Gv~~liav~q-d~sgea~e~-----a~al~~aiG~~ 287 (417)
+.+++||- ..|.++.+. +..+..-++..
T Consensus 251 -------~~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~~ 284 (381)
T 3oet_A 251 -------VDIGTSHIAGYTLEGKARGTTQVFEAYSAFIGRE 284 (381)
T ss_dssp -------SSEECSSCTTCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred -------CEEECCccCcCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 34688886 345455443 34555566653
No 125
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.66 E-value=3.8e-08 Score=98.13 Aligned_cols=105 Identities=19% Similarity=0.110 Sum_probs=78.8
Q ss_pred hhccCcccccc--cccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcC
Q 014863 93 IVRGGRDLFNL--LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (417)
Q Consensus 93 ~~~~g~~~f~~--~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~ 170 (417)
.+++|+|.... ....+.| ++|||||+|.+|..+|+.++.. |++|+++++... +...+.|+. ..
T Consensus 122 ~~~~~~~~~~~~~~~~~l~g-~tvGIiG~G~IG~~va~~~~~f------g~~v~~~d~~~~---~~~~~~~~~-----~~ 186 (334)
T 3kb6_A 122 RVKKLNFSQDSEILARELNR-LTLGVIGTGRIGSRVAMYGLAF------GMKVLCYDVVKR---EDLKEKGCV-----YT 186 (334)
T ss_dssp HHHTTCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCC---HHHHHTTCE-----EC
T ss_pred cccccccccccccccceecC-cEEEEECcchHHHHHHHhhccc------CceeeecCCccc---hhhhhcCce-----ec
Confidence 34556553322 2478899 9999999999999999999888 999876655422 233455666 46
Q ss_pred CHHhhhccCCeEEEeecchhHH-HHHH-HHHhcCCCCcEEEEec
Q 014863 171 DIYETISGSDLVLLLISDAAQA-DNYE-KIFSCMKPNSILGLSH 212 (417)
Q Consensus 171 ~~~Eav~~ADiViLavpd~a~~-~Vl~-eI~p~Lk~GaiL~~a~ 212 (417)
+.+|++++||+|++++|-.... .++. +.+..||+|++|+-++
T Consensus 187 ~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~a 230 (334)
T 3kb6_A 187 SLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTA 230 (334)
T ss_dssp CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred CHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecC
Confidence 8999999999999999966553 4564 5778899999988553
No 126
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.65 E-value=6.4e-08 Score=93.89 Aligned_cols=94 Identities=17% Similarity=0.251 Sum_probs=71.2
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
..+.| ++|+|||+|.||.++|+.|+.. |.+|+++++... ..+.+.+.|+... ...+.+++++++|+|+++
T Consensus 151 ~~l~g-~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~dr~~~-~~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 151 FTIHG-ANVAVLGLGRVGMSVARKFAAL------GAKVKVGARESD-LLARIAEMGMEPF--HISKAAQELRDVDVCINT 220 (293)
T ss_dssp SCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSHH-HHHHHHHTTSEEE--EGGGHHHHTTTCSEEEEC
T ss_pred CCCCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHCCCeec--ChhhHHHHhcCCCEEEEC
Confidence 46789 9999999999999999999988 998888777533 3344456676520 024678889999999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+|+..+.+ +....|++|.+|++++
T Consensus 221 ~p~~~i~~---~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 221 IPALVVTA---NVLAEMPSHTFVIDLA 244 (293)
T ss_dssp CSSCCBCH---HHHHHSCTTCEEEECS
T ss_pred CChHHhCH---HHHHhcCCCCEEEEec
Confidence 99854322 3456789999988775
No 127
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.63 E-value=4.6e-07 Score=92.40 Aligned_cols=97 Identities=15% Similarity=0.205 Sum_probs=70.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--------eEEEEecCCc---hhHHHHHH-c--------CceecC--CCc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--------VVKVGLRKGS---RSFAEARA-A--------GFTEEN--GTL 169 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--------~Vivg~r~~~---~s~~~A~~-~--------G~~~~d--~~~ 169 (417)
.||+|||.|+.|.++|.-|.++ |+ +|.+|.|..+ +....... . |+...+ ...
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n------g~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t 108 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN------CKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVAN 108 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHc------CCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEe
Confidence 4899999999999999999887 53 4777766532 11111111 1 111100 014
Q ss_pred CCHHhhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEE-Eeccc
Q 014863 170 GDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGF 214 (417)
Q Consensus 170 ~~~~Eav~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~-~a~G~ 214 (417)
.|+++++++||+|++++|.+...++++++.++++++..|+ .+-|+
T Consensus 109 ~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 109 PDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp SCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred CCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEecccc
Confidence 5789999999999999999999999999999999988654 55576
No 128
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.63 E-value=8.5e-08 Score=93.23 Aligned_cols=94 Identities=21% Similarity=0.344 Sum_probs=71.6
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
..+.| ++|+|||+|.||.++++.|+.. |.+|+++++... ..+.+.+.|+... ...+.+++++++|+|+++
T Consensus 153 ~~l~g-~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~d~~~~-~~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 153 YTIHG-SQVAVLGLGRTGMTIARTFAAL------GANVKVGARSSA-HLARITEMGLVPF--HTDELKEHVKDIDICINT 222 (300)
T ss_dssp SCSTT-SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSHH-HHHHHHHTTCEEE--EGGGHHHHSTTCSEEEEC
T ss_pred CCCCC-CEEEEEcccHHHHHHHHHHHHC------CCEEEEEECCHH-HHHHHHHCCCeEE--chhhHHHHhhCCCEEEEC
Confidence 57889 9999999999999999999988 999888777633 3344445676420 024678899999999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+|+..+. ++....|++|.+|++++
T Consensus 223 ~p~~~i~---~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 223 IPSMILN---QTVLSSMTPKTLILDLA 246 (300)
T ss_dssp CSSCCBC---HHHHTTSCTTCEEEECS
T ss_pred CChhhhC---HHHHHhCCCCCEEEEEe
Confidence 9985332 24567899999988665
No 129
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.62 E-value=3.3e-07 Score=76.92 Aligned_cols=96 Identities=14% Similarity=0.043 Sum_probs=65.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHH-HcCceecCCCcCCHH----hhhccCCeEEEee
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEENGTLGDIY----ETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~-~~G~~~~d~~~~~~~----Eav~~ADiViLav 186 (417)
|+|+|||+|.+|..+++.|.+. |++|++.++.... .+... ..|+....+...+.+ ..++++|+|++++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~------g~~v~~~d~~~~~-~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK------GHDIVLIDIDKDI-CKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHH-HHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 7999999999999999999998 9988877765333 33333 346532111122222 2267899999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEeccc
Q 014863 187 SDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL~~a~G~ 214 (417)
|+......+..+.+.++++.+|..+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 105 (140)
T 1lss_A 78 GKEEVNLMSSLLAKSYGINKTIARISEI 105 (140)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred CCchHHHHHHHHHHHcCCCEEEEEecCH
Confidence 9886665555666667777777655543
No 130
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.61 E-value=5.1e-08 Score=85.92 Aligned_cols=111 Identities=11% Similarity=0.004 Sum_probs=78.0
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCceEEEEecCCc-hhHHHHHHcCceecCCCcCCHHhhhccCCeEEEee
Q 014863 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~-~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLav 186 (417)
++|+|||. |+||..++++|++. |++|+..+.... +. -.|... ..+++|+....|++++++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~------G~~v~~vnp~~~g~~-----i~G~~~----~~sl~el~~~~Dlvii~v 78 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQ------GYHVIPVSPKVAGKT-----LLGQQG----YATLADVPEKVDMVDVFR 78 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHH------TCCEEEECSSSTTSE-----ETTEEC----CSSTTTCSSCCSEEECCS
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHC------CCEEEEeCCcccccc-----cCCeec----cCCHHHcCCCCCEEEEEe
Confidence 88999999 89999999999999 988655444320 11 147764 567888888999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCCCCCcEEEeccCCchhh
Q 014863 187 SDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~ 243 (417)
|+....++++++.. ...+.+|++.+.+.-...+. .-..++++ +.||+++-.
T Consensus 79 p~~~v~~v~~~~~~-~g~~~i~i~~~~~~~~l~~~---a~~~Gi~~--igpnc~g~~ 129 (145)
T 2duw_A 79 NSEAAWGVAQEAIA-IGAKTLWLQLGVINEQAAVL---AREAGLSV--VMDRCPAIE 129 (145)
T ss_dssp CSTHHHHHHHHHHH-HTCCEEECCTTCCCHHHHHH---HHTTTCEE--ECSCCHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEEcCChHHHHHHHH---HHHcCCEE--EcCCeeeEE
Confidence 99999999988766 44555666665553221111 11234444 569998876
No 131
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.61 E-value=2.6e-08 Score=104.04 Aligned_cols=94 Identities=18% Similarity=0.229 Sum_probs=73.8
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
..+.| ++|+|||+|.||.++|+.++.. |.+|++.++. ......+...|+. +.++++++++||+|+++
T Consensus 253 ~~l~G-ktVgIIG~G~IG~~vA~~l~~~------G~~Viv~d~~-~~~~~~a~~~g~~-----~~~l~ell~~aDiVi~~ 319 (479)
T 1v8b_A 253 FLISG-KIVVICGYGDVGKGCASSMKGL------GARVYITEID-PICAIQAVMEGFN-----VVTLDEIVDKGDFFITC 319 (479)
T ss_dssp CCCTT-SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSC-HHHHHHHHTTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred cccCC-CEEEEEeeCHHHHHHHHHHHhC------cCEEEEEeCC-hhhHHHHHHcCCE-----ecCHHHHHhcCCEEEEC
Confidence 46899 9999999999999999999998 9998776655 3323355667886 46899999999999999
Q ss_pred ecchhHHHHH-HHHHhcCCCCcEEEEeccch
Q 014863 186 ISDAAQADNY-EKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 186 vpd~a~~~Vl-~eI~p~Lk~GaiL~~a~G~~ 215 (417)
+.. ..++ .+.+..||+|++|+.++-+.
T Consensus 320 ~~t---~~lI~~~~l~~MK~gailiNvgrg~ 347 (479)
T 1v8b_A 320 TGN---VDVIKLEHLLKMKNNAVVGNIGHFD 347 (479)
T ss_dssp CSS---SSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred CCh---hhhcCHHHHhhcCCCcEEEEeCCCC
Confidence 732 2334 36778899999999775443
No 132
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.58 E-value=2.7e-08 Score=104.23 Aligned_cols=93 Identities=19% Similarity=0.194 Sum_probs=72.8
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
..+.| ++|+|||+|.||.++|+.|+.. |.+|+++++... ....+...|+. ..++++++++||+|+++
T Consensus 273 ~~L~G-ktVgIIG~G~IG~~vA~~l~~~------G~~V~v~d~~~~-~~~~a~~~G~~-----~~~l~ell~~aDiVi~~ 339 (494)
T 3d64_A 273 VMIAG-KIAVVAGYGDVGKGCAQSLRGL------GATVWVTEIDPI-CALQAAMEGYR-----VVTMEYAADKADIFVTA 339 (494)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSCHH-HHHHHHTTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred cccCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCChH-hHHHHHHcCCE-----eCCHHHHHhcCCEEEEC
Confidence 56899 9999999999999999999988 999887766532 23345566876 45899999999999999
Q ss_pred ecchhHHHHH-HHHHhcCCCCcEEEEeccc
Q 014863 186 ISDAAQADNY-EKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 186 vpd~a~~~Vl-~eI~p~Lk~GaiL~~a~G~ 214 (417)
+.. ..++ .+.+..||+|++|+.++-.
T Consensus 340 ~~t---~~lI~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 340 TGN---YHVINHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp SSS---SCSBCHHHHHHCCTTEEEEECSSS
T ss_pred CCc---ccccCHHHHhhCCCCcEEEEcCCC
Confidence 832 2334 3677889999999966543
No 133
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.58 E-value=3.7e-09 Score=102.34 Aligned_cols=98 Identities=12% Similarity=0.121 Sum_probs=71.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhh-ccCCeEEEeecchh
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav-~~ADiViLavpd~a 190 (417)
|||+|||.|+||.++|..|.++ |++|.++.|.... .+.....|... .....+..+.+ +.+|+||++||+.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~------g~~V~~~~r~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~~~D~vilavk~~~ 74 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS------LPHTTLIGRHAKT-ITYYTVPHAPA-QDIVVKGYEDVTNTFDVIIIAVKTHQ 74 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------CTTCEEEESSCEE-EEEESSTTSCC-EEEEEEEGGGCCSCEEEEEECSCGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHC------CCeEEEEEeccCc-EEEEecCCeec-cceecCchHhcCCCCCEEEEeCCccC
Confidence 7999999999999999999999 8888888776332 11112234211 00012344554 88999999999999
Q ss_pred HHHHHHHHHhcCCCCcE-EEEeccchhh
Q 014863 191 QADNYEKIFSCMKPNSI-LGLSHGFLLG 217 (417)
Q Consensus 191 ~~~Vl~eI~p~Lk~Gai-L~~a~G~~i~ 217 (417)
..++++++.|+++++++ |++..|+...
T Consensus 75 ~~~~l~~l~~~l~~~~~iv~~~nGi~~~ 102 (294)
T 3g17_A 75 LDAVIPHLTYLAHEDTLIILAQNGYGQL 102 (294)
T ss_dssp HHHHGGGHHHHEEEEEEEEECCSSCCCG
T ss_pred HHHHHHHHHHhhCCCCEEEEeccCcccH
Confidence 99999999999988875 4577888643
No 134
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.57 E-value=2.7e-08 Score=86.05 Aligned_cols=90 Identities=20% Similarity=0.158 Sum_probs=68.0
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch
Q 014863 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 110 g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~ 189 (417)
| ++|+|||+|.||.++++.|+.. |++|.+++|...+..+.+.+.|.... ...+..++++++|+|+.++|..
T Consensus 21 ~-~~v~iiG~G~iG~~~a~~l~~~------g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 21 G-NKILLVGNGMLASEIAPYFSYP------QYKVTVAGRNIDHVRAFAEKYEYEYV--LINDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp C-CEEEEECCSHHHHHHGGGCCTT------TCEEEEEESCHHHHHHHHHHHTCEEE--ECSCHHHHHHTCSEEEECSCCS
T ss_pred C-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEcCCHHHHHHHHHHhCCceE--eecCHHHHhcCCCEEEEeCCCC
Confidence 7 9999999999999999999888 88887777775555556777775421 1457889999999999999976
Q ss_pred hHHHHHHHHHhcCCCCcEEEEec
Q 014863 190 AQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 190 a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
.. ++. ...+++|.++++.+
T Consensus 92 ~~--~~~--~~~l~~g~~vid~~ 110 (144)
T 3oj0_A 92 TP--IVE--ERSLMPGKLFIDLG 110 (144)
T ss_dssp SC--SBC--GGGCCTTCEEEECC
T ss_pred Cc--Eee--HHHcCCCCEEEEcc
Confidence 22 111 25578888877553
No 135
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.55 E-value=8e-08 Score=94.30 Aligned_cols=90 Identities=12% Similarity=0.156 Sum_probs=67.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcC--ceecCCCcCCHHhhhccCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG--FTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G--~~~~d~~~~~~~Eav~~ADiViLavpd 188 (417)
++|+|||+|.||.+++++|.+. .|+ +|.+++|..++..+.+.+.+ +.. +.+.+++++++|+|+++||.
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~-----~g~~~V~v~dr~~~~~~~l~~~~~~~~~~----~~~~~e~v~~aDiVi~atp~ 206 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQ-----FSFKEVRIWNRTKENAEKFADTVQGEVRV----CSSVQEAVAGADVIITVTLA 206 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CCCSEEEEECSSHHHHHHHHHHSSSCCEE----CSSHHHHHTTCSEEEECCCC
T ss_pred cEEEEECCcHHHHHHHHHHHHh-----CCCcEEEEEcCCHHHHHHHHHHhhCCeEE----eCCHHHHHhcCCEEEEEeCC
Confidence 8999999999999999999764 155 78787776555555555556 553 56899999999999999995
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccc
Q 014863 189 AAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~~a~G~ 214 (417)
. ..++.. +.+++|++|++++.+
T Consensus 207 ~--~~v~~~--~~l~~g~~vi~~g~~ 228 (312)
T 2i99_A 207 T--EPILFG--EWVKPGAHINAVGAS 228 (312)
T ss_dssp S--SCCBCG--GGSCTTCEEEECCCC
T ss_pred C--CcccCH--HHcCCCcEEEeCCCC
Confidence 2 233322 578899988876554
No 136
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.52 E-value=3.2e-06 Score=92.51 Aligned_cols=212 Identities=12% Similarity=0.106 Sum_probs=136.2
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-----------cCceec-CC-----CcCC
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-NG-----TLGD 171 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-----------~G~~~~-d~-----~~~~ 171 (417)
+.|+||+|||.|.||..+|..+... |++|++.+.. .+..+.+.+ .+.... .. ...+
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~a------G~~V~l~D~~-~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 386 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARV------GISVVAVESD-PKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSS 386 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTT------TCEEEEECSS-HHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEES
T ss_pred ccccEEEEEcccHHHHHHHHHHHhC------CCchhcccch-HhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccC
Confidence 3468999999999999999999999 9999877654 322222221 110000 00 0122
Q ss_pred HHhhhccCCeEEEeecchhHH--HHHHHHHhcCCCCcEEE-EeccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHH
Q 014863 172 IYETISGSDLVLLLISDAAQA--DNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (417)
Q Consensus 172 ~~Eav~~ADiViLavpd~a~~--~Vl~eI~p~Lk~GaiL~-~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly 248 (417)
..+.+++||+||=++|-.... +++.++-++++++++|. -++++.+..+.. .....-+|+..|+--|.+.++
T Consensus 387 ~~~~l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~---~~~~p~r~ig~HFfnP~~~m~--- 460 (742)
T 3zwc_A 387 STKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS---STDRPQLVIGTHFFSPAHVMR--- 460 (742)
T ss_dssp CGGGGGSCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEECCSSTTTCC---
T ss_pred cHHHHhhCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHh---hcCCccccccccccCCCCCCc---
Confidence 335688999999999965553 69999999999999875 667888887765 222234899999988877731
Q ss_pred hhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccccccchHHH--HHHHHHHHHHH
Q 014863 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHG--IVESLFRRFTE 326 (417)
Q Consensus 249 ~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqtvL~G~~~a--~iea~~~~~v~ 326 (417)
.-= |.++...+.+.++.+.++...+|...++ . . | ..+-+..-+.. +.|++ .+++
T Consensus 461 ----------LVE-vi~g~~Ts~e~~~~~~~~~~~lgK~pV~-v---k----d---~pGFi~NRi~~~~~~ea~--~l~~ 516 (742)
T 3zwc_A 461 ----------LLE-VIPSRYSSPTTIATVMSLSKKIGKIGVV-V---G----N---CYGFVGNRMLAPYYNQGF--FLLE 516 (742)
T ss_dssp ----------EEE-EEECSSCCHHHHHHHHHHHHHTTCEEEE-C---C----C---STTTTHHHHHHHHHHHHH--HHHH
T ss_pred ----------eEE-EecCCCCCHHHHHHHHHHHHHhCCCCcc-c---C----C---CCCccHHHHhhHHHHHHH--HHHH
Confidence 111 3458889999999999999999965222 1 1 1 11223333222 33333 4667
Q ss_pred cCCCHHHHHHHHHHHHH--HHHHHHHHHhcHHHH
Q 014863 327 NGMNEDLAYKNTVECIT--GIISKIISTQGMLAV 358 (417)
Q Consensus 327 ~Gl~~e~A~~~~~~~l~--~~~~~li~e~G~~~l 358 (417)
.|.++++--.... .+- -|--.|+-.-|++.+
T Consensus 517 eG~~~~~id~a~~-~~G~pmGPf~l~D~vGlDv~ 549 (742)
T 3zwc_A 517 EGSKPEDVDGVLE-EFGFKMGPFRVSDLAGLDVG 549 (742)
T ss_dssp TTCCHHHHHHHHH-HHTCSSCHHHHHHHHCHHHH
T ss_pred cCCCHHHHHHHHH-HcCCCCChHHHHHHhCHHHH
Confidence 7888877655332 110 145566666677543
No 137
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.51 E-value=1.4e-07 Score=97.27 Aligned_cols=92 Identities=16% Similarity=0.182 Sum_probs=72.5
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
..+.| ++|+|||+|.+|.++|+.|+.. |.+|++.++. ......+...|+. ..+++|++++||+|+++
T Consensus 207 ~~L~G-ktVgIiG~G~IG~~vA~~Lka~------Ga~Viv~D~~-p~~a~~A~~~G~~-----~~sL~eal~~ADVVilt 273 (436)
T 3h9u_A 207 VMIAG-KTACVCGYGDVGKGCAAALRGF------GARVVVTEVD-PINALQAAMEGYQ-----VLLVEDVVEEAHIFVTT 273 (436)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred CcccC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCC-hhhhHHHHHhCCe-----ecCHHHHHhhCCEEEEC
Confidence 56889 9999999999999999999998 9998776554 4444556678887 46899999999999986
Q ss_pred ecchhHHHHHH-HHHhcCCCCcEEEEecc
Q 014863 186 ISDAAQADNYE-KIFSCMKPNSILGLSHG 213 (417)
Q Consensus 186 vpd~a~~~Vl~-eI~p~Lk~GaiL~~a~G 213 (417)
+.... ++. +.+..||+|++|+.++-
T Consensus 274 ~gt~~---iI~~e~l~~MK~gAIVINvgR 299 (436)
T 3h9u_A 274 TGNDD---IITSEHFPRMRDDAIVCNIGH 299 (436)
T ss_dssp SSCSC---SBCTTTGGGCCTTEEEEECSS
T ss_pred CCCcC---ccCHHHHhhcCCCcEEEEeCC
Confidence 65332 233 56788999999886653
No 138
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.49 E-value=7.8e-08 Score=91.56 Aligned_cols=90 Identities=19% Similarity=0.138 Sum_probs=68.2
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEee
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLav 186 (417)
.++| +|+|||+|.||.+++++|.+. |.+|.+.+|+.++..+.+.+.|.. ..+.+++ +++|+|++++
T Consensus 114 ~l~~--~v~iiG~G~~g~~~a~~l~~~------g~~v~v~~r~~~~~~~l~~~~~~~-----~~~~~~~-~~~Divi~~t 179 (263)
T 2d5c_A 114 PLKG--PALVLGAGGAGRAVAFALREA------GLEVWVWNRTPQRALALAEEFGLR-----AVPLEKA-REARLLVNAT 179 (263)
T ss_dssp CCCS--CEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHHTCE-----ECCGGGG-GGCSEEEECS
T ss_pred CCCC--eEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHhccc-----hhhHhhc-cCCCEEEEcc
Confidence 3566 899999999999999999998 888888877655445555555654 3467788 9999999999
Q ss_pred cchhHH---HHHHHHHhcCCCCcEEEEec
Q 014863 187 SDAAQA---DNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 187 pd~a~~---~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|+..+. .++. .+.+++|++|+++.
T Consensus 180 p~~~~~~~~~~l~--~~~l~~g~~viD~~ 206 (263)
T 2d5c_A 180 RVGLEDPSASPLP--AELFPEEGAAVDLV 206 (263)
T ss_dssp STTTTCTTCCSSC--GGGSCSSSEEEESC
T ss_pred CCCCCCCCCCCCC--HHHcCCCCEEEEee
Confidence 998653 2222 46688898887643
No 139
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=98.48 E-value=3.4e-06 Score=82.62 Aligned_cols=172 Identities=15% Similarity=0.195 Sum_probs=128.0
Q ss_pred cCceecCCCcCCHHhhhccCCeEEEeecchh-HHHHHHHHHhcCCCCcEEEEeccch---hhh-hhccccCCCCCCcEEE
Q 014863 160 AGFTEENGTLGDIYETISGSDLVLLLISDAA-QADNYEKIFSCMKPNSILGLSHGFL---LGH-LQSMGLDFPKNIGVIA 234 (417)
Q Consensus 160 ~G~~~~d~~~~~~~Eav~~ADiViLavpd~a-~~~Vl~eI~p~Lk~GaiL~~a~G~~---i~~-~~~~~i~~~~di~VI~ 234 (417)
.|+.. +.|..|+++++|++|+=+|-.. +.+++++|.++++.|++|+.++-++ +.+ ++. .. ++|+.|..
T Consensus 127 aGVkV----tsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTCTipp~~ly~~le~--l~-R~DvgIsS 199 (358)
T 2b0j_A 127 VGLKV----TSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACTIPTTKFAKIFKD--LG-REDLNITS 199 (358)
T ss_dssp GTCEE----ESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECSSSCHHHHHHHHHH--TT-CTTSEEEE
T ss_pred cCcEe----ecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecccCCCHHHHHHHHHH--hC-cccCCeec
Confidence 68886 6788899999999999999776 7899999999999999999887664 222 232 23 78999999
Q ss_pred eccCC-chhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCc-ccccchhhhhhhhcccccccccch
Q 014863 235 VCPKG-MGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPF-TFATTLEQEYRSDIFGERGILLGA 312 (417)
Q Consensus 235 v~Pn~-pg~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~-~iett~~~E~~~dlfgeqtvL~G~ 312 (417)
.||-+ ||. .|-.. +. ..-++.++.++...|++..|..- .+.. |+.+..+-.+-.
T Consensus 200 ~HPaaVPgt--------------~Gq~~-~g-~~yAtEEqIeklveLaksa~k~ay~vPA--------dl~SpV~DMgs~ 255 (358)
T 2b0j_A 200 YHPGCVPEM--------------KGQVY-IA-EGYASEEAVNKLYEIGKIARGKAFKMPA--------NLIGPVCDMCSA 255 (358)
T ss_dssp CBCSSCTTT--------------CCCEE-EE-ESSSCHHHHHHHHHHHHHHHSCEEEEEH--------HHHHHHHSTTHH
T ss_pred cCCCCCCCC--------------CCccc-cc-cccCCHHHHHHHHHHHHHhCCCeEecch--------hhccchhhhHHH
Confidence 99933 333 13332 22 55689999999999999999752 2222 444444434444
Q ss_pred HHHH----HHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhccc
Q 014863 313 VHGI----VESLFRRF-TENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFS 363 (417)
Q Consensus 313 ~~a~----iea~~~~~-v~~Gl~~e~A~~~~~~~l~~~~~~li~e~G~~~l~~~vs 363 (417)
+.+. +..-++.. .-.|-|.+++-+.+.++|. .++.|+.++|+.+|-+.+.
T Consensus 256 vTAv~~AGiL~Y~~~vtkIlgAP~~mie~q~~esL~-tiasLve~~GI~gm~k~Ln 310 (358)
T 2b0j_A 256 VTATVYAGLLAYRDAVTKILGAPADFAQMMADEALT-QIHNLMKEKGIANMEEALD 310 (358)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHH-HHHHHHHHHCGGGHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHhcC
Confidence 4443 33334344 4679999999999999998 9999999999999988876
No 140
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.44 E-value=5.7e-07 Score=87.73 Aligned_cols=94 Identities=15% Similarity=0.114 Sum_probs=64.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCC--ceEEEEecCCchhHHHHHHcC---------ceecCCCcCCHHhhhccC
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARAAG---------FTEENGTLGDIYETISGS 179 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G--~~Vivg~r~~~~s~~~A~~~G---------~~~~d~~~~~~~Eav~~A 179 (417)
|+||+|||.|+||.++|..|... | .+|++.++...+....+.+.+ +.. ...+. +++++|
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~------g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~d~-~~~~~a 70 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ------GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNI---VINDW-AALADA 70 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEE---EESCG-GGGTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEE---EeCCH-HHhCCC
Confidence 58999999999999999999998 8 578777665433333332211 121 02455 788999
Q ss_pred CeEEEeecchhH--------------------HHHHHHHHhcCCCCcE-EEEeccch
Q 014863 180 DLVLLLISDAAQ--------------------ADNYEKIFSCMKPNSI-LGLSHGFL 215 (417)
Q Consensus 180 DiViLavpd~a~--------------------~~Vl~eI~p~Lk~Gai-L~~a~G~~ 215 (417)
|+||+++|+... .++++++.++. ++.+ |.++-+..
T Consensus 71 DvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 71 DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVD 126 (309)
T ss_dssp SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHH
T ss_pred CEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHH
Confidence 999999997653 46666777765 4544 44555554
No 141
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.42 E-value=7e-07 Score=92.55 Aligned_cols=123 Identities=24% Similarity=0.224 Sum_probs=86.1
Q ss_pred cccchhhHhhhhhcccchhhhccCcccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchh
Q 014863 74 FETSVFKKDMISLADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS 153 (417)
Q Consensus 74 ~~~~~~~~~~~~~~~~~e~~~~~g~~~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s 153 (417)
-|-.+-+.+.-+.-|..|..+.+=. .. ....+.| ++|+|||+|.+|..+|+.++.. |.+|++.++. ...
T Consensus 214 Vnds~tK~~fDn~yG~~eslvdgI~--Ra-tg~~L~G-KTVgVIG~G~IGr~vA~~lraf------Ga~Viv~d~d-p~~ 282 (464)
T 3n58_A 214 VNDSVTKSKFDNKYGCKESLVDGIR--RG-TDVMMAG-KVAVVCGYGDVGKGSAQSLAGA------GARVKVTEVD-PIC 282 (464)
T ss_dssp CTTSHHHHTTHHHHHHHHHHHHHHH--HH-HCCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSS-HHH
T ss_pred eccHhhhhhhhhhhcchHHHHHHHH--Hh-cCCcccC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEeCC-cch
Confidence 3455555555555555554443111 11 1246889 9999999999999999999988 9998876654 333
Q ss_pred HHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchhHHHHH-HHHHhcCCCCcEEEEeccch
Q 014863 154 FAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNY-EKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 154 ~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a~~~Vl-~eI~p~Lk~GaiL~~a~G~~ 215 (417)
...+...|+. +.+++|++++||+|++++... .++ .+.+..||+|++|+.++-+.
T Consensus 283 a~~A~~~G~~-----vv~LeElL~~ADIVv~atgt~---~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 283 ALQAAMDGFE-----VVTLDDAASTADIVVTTTGNK---DVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp HHHHHHTTCE-----ECCHHHHGGGCSEEEECCSSS---SSBCHHHHHHSCTTEEEEECSSST
T ss_pred hhHHHhcCce-----eccHHHHHhhCCEEEECCCCc---cccCHHHHhcCCCCeEEEEcCCCC
Confidence 4456667887 458999999999999987532 344 36777899999998766544
No 142
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.36 E-value=4.1e-07 Score=93.85 Aligned_cols=93 Identities=23% Similarity=0.248 Sum_probs=72.3
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
..+.| ++|+|||+|.+|..+|+.|+.. |.+|++.++. ......|...|+. +.+++++++++|+|+++
T Consensus 216 ~~L~G-ktV~ViG~G~IGk~vA~~Lra~------Ga~Viv~D~d-p~ra~~A~~~G~~-----v~~Leeal~~ADIVi~a 282 (435)
T 3gvp_A 216 MMFGG-KQVVVCGYGEVGKGCCAALKAM------GSIVYVTEID-PICALQACMDGFR-----LVKLNEVIRQVDIVITC 282 (435)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred ceecC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCC-hhhhHHHHHcCCE-----eccHHHHHhcCCEEEEC
Confidence 46789 9999999999999999999998 9998776654 3334556678886 46899999999999997
Q ss_pred ecchhHHHHHH-HHHhcCCCCcEEEEeccc
Q 014863 186 ISDAAQADNYE-KIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 186 vpd~a~~~Vl~-eI~p~Lk~GaiL~~a~G~ 214 (417)
+- ...++. +.+..||+|.+|+.++-+
T Consensus 283 tg---t~~lI~~e~l~~MK~gailINvgrg 309 (435)
T 3gvp_A 283 TG---NKNVVTREHLDRMKNSCIVCNMGHS 309 (435)
T ss_dssp SS---CSCSBCHHHHHHSCTTEEEEECSST
T ss_pred CC---CcccCCHHHHHhcCCCcEEEEecCC
Confidence 32 223453 667789999998866533
No 143
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.36 E-value=7.1e-07 Score=83.55 Aligned_cols=78 Identities=23% Similarity=0.242 Sum_probs=58.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEE-EEecCCchhHHHHHHcCceecCCCcCCHHhhh-ccCCeEEEeecch
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav-~~ADiViLavpd~ 189 (417)
+||||||+|.||..++++|.+. |++++ ++++. .+. .+ . +.++++++ .++|+|++++|+.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~------g~~lv~v~d~~-~~~----~~---~-----~~~~~~l~~~~~DvVv~~~~~~ 61 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN------GFEIAAILDVR-GEH----EK---M-----VRGIDEFLQREMDVAVEAASQQ 61 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEECSS-CCC----TT---E-----ESSHHHHTTSCCSEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHhcC------CCEEEEEEecC-cch----hh---h-----cCCHHHHhcCCCCEEEECCCHH
Confidence 5899999999999999999877 88874 44443 321 11 2 46888988 6999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEEe
Q 014863 190 AQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 190 a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
.+.+++... ++.|+.|++.
T Consensus 62 ~~~~~~~~~---l~~G~~vv~~ 80 (236)
T 2dc1_A 62 AVKDYAEKI---LKAGIDLIVL 80 (236)
T ss_dssp HHHHHHHHH---HHTTCEEEES
T ss_pred HHHHHHHHH---HHCCCcEEEE
Confidence 888877543 4567766544
No 144
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.34 E-value=1e-06 Score=92.29 Aligned_cols=92 Identities=22% Similarity=0.318 Sum_probs=73.6
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEee
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLav 186 (417)
.+.| ++|+|||+|.||..+|+.++.. |.+|++.++. ....+.|.+.|+. +.+.+++++++|+|++++
T Consensus 271 ~l~G-ktV~IiG~G~IG~~~A~~lka~------Ga~Viv~d~~-~~~~~~A~~~Ga~-----~~~l~e~l~~aDvVi~at 337 (494)
T 3ce6_A 271 LIGG-KKVLICGYGDVGKGCAEAMKGQ------GARVSVTEID-PINALQAMMEGFD-----VVTVEEAIGDADIVVTAT 337 (494)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHGGGCSEEEECS
T ss_pred CCCc-CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCE-----EecHHHHHhCCCEEEECC
Confidence 5788 9999999999999999999998 9987766554 4455677888986 357888999999999999
Q ss_pred cchhHHHHHH-HHHhcCCCCcEEEEeccc
Q 014863 187 SDAAQADNYE-KIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 187 pd~a~~~Vl~-eI~p~Lk~GaiL~~a~G~ 214 (417)
+... ++. +....|++|.+|+.++-+
T Consensus 338 gt~~---~i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 338 GNKD---IIMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp SSSC---SBCHHHHHHSCTTCEEEECSSS
T ss_pred CCHH---HHHHHHHHhcCCCcEEEEeCCC
Confidence 8654 233 566779999998876544
No 145
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.29 E-value=1.9e-06 Score=84.50 Aligned_cols=80 Identities=18% Similarity=0.167 Sum_probs=61.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCC-chhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd 188 (417)
.||||||+|+||..++.+|++. .+++++...+.+ .+..+.+.+.|... ..+.+++++ +.|+|++++|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAAN-----PDLELVVIADPFIEGAQRLAEANGAEA----VASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHTTTCEE----ESSHHHHTTCSCCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHcCCce----eCCHHHHhcCCCCCEEEEeCCc
Confidence 6899999999999999999875 156665334443 34345566677654 678999998 89999999999
Q ss_pred hhHHHHHHHHHh
Q 014863 189 AAQADNYEKIFS 200 (417)
Q Consensus 189 ~a~~~Vl~eI~p 200 (417)
..+.++....+.
T Consensus 76 ~~h~~~~~~al~ 87 (344)
T 3euw_A 76 STHVDLITRAVE 87 (344)
T ss_dssp GGHHHHHHHHHH
T ss_pred hhhHHHHHHHHH
Confidence 999988766543
No 146
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.27 E-value=6.5e-07 Score=89.74 Aligned_cols=95 Identities=19% Similarity=0.178 Sum_probs=67.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-ceEEEEecCCchhHHHHHHc----CceecCCCcCCHHhhhccCCeEEEee
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAA----GFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-~~Vivg~r~~~~s~~~A~~~----G~~~~d~~~~~~~Eav~~ADiViLav 186 (417)
++|+|||+|.||.+++++|.... + .+|.+++|..++..+.+.+. |+.. ..+.+.+++++++|+|++||
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~-----~~~~V~V~~r~~~~a~~la~~~~~~~g~~~--~~~~~~~eav~~aDiVi~aT 202 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHL-----GIEEIVAYDTDPLATAKLIANLKEYSGLTI--RRASSVAEAVKGVDIITTVT 202 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHS-----CCCEEEEECSSHHHHHHHHHHHTTCTTCEE--EECSSHHHHHTTCSEEEECC
T ss_pred CeEEEECCcHHHHHHHHHHHHhC-----CCcEEEEEcCCHHHHHHHHHHHHhccCceE--EEeCCHHHHHhcCCEEEEec
Confidence 89999999999999999986530 3 36888887755555555543 5321 01568899999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEeccch
Q 014863 187 SDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL~~a~G~~ 215 (417)
|......++. ...+++|++|...+.+.
T Consensus 203 ps~~~~pvl~--~~~l~~G~~V~~vgs~~ 229 (350)
T 1x7d_A 203 ADKAYATIIT--PDMLEPGMHLNAVGGDC 229 (350)
T ss_dssp CCSSEEEEEC--GGGCCTTCEEEECSCCB
T ss_pred cCCCCCceec--HHHcCCCCEEEECCCCC
Confidence 9864222332 25688999888776553
No 147
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.27 E-value=1.5e-06 Score=84.04 Aligned_cols=86 Identities=13% Similarity=0.064 Sum_probs=64.2
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCceEE-EEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch
Q 014863 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~ 189 (417)
+||||||+|.||.. ++.+|++. .+.+++ +.++..++..+.+.+.|+.. ..+.++++++.|+|++++|+.
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~~~~~----~~~~~~ll~~~D~V~i~tp~~ 77 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKS-----ERFEFVGAFTPNKVKREKICSDYRIMP----FDSIESLAKKCDCIFLHSSTE 77 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSC-----SSSEEEEEECSCHHHHHHHHHHHTCCB----CSCHHHHHTTCSEEEECCCGG
T ss_pred CcEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHHhcCCEEEEeCCcH
Confidence 68999999999996 88888764 156666 44444344455666678763 678999999999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEE
Q 014863 190 AQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 190 a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
.+.++..... +.|+.|.
T Consensus 78 ~h~~~~~~al---~~gk~vl 94 (308)
T 3uuw_A 78 THYEIIKILL---NLGVHVY 94 (308)
T ss_dssp GHHHHHHHHH---HTTCEEE
T ss_pred hHHHHHHHHH---HCCCcEE
Confidence 9998876654 3455443
No 148
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=98.27 E-value=1.3e-06 Score=86.11 Aligned_cols=122 Identities=12% Similarity=0.146 Sum_probs=85.4
Q ss_pred cCCCCEEEEE-cc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEE
Q 014863 108 FNGINQIGVI-GW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVL 183 (417)
Q Consensus 108 l~g~kkIgII-G~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiVi 183 (417)
+.- ++|+|| |+ |++|..++++|++. |+++++..++.... ..-.|+.. ..+++|+.+ ..|+++
T Consensus 11 ~~~-~siaVV~Gasg~~G~~~~~~l~~~------G~~~v~~VnP~~~g---~~i~G~~v----y~sl~el~~~~~vD~av 76 (305)
T 2fp4_A 11 VDK-NTKVICQGFTGKQGTFHSQQALEY------GTNLVGGTTPGKGG---KTHLGLPV----FNTVKEAKEQTGATASV 76 (305)
T ss_dssp CCT-TCEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHHCCCEEE
T ss_pred hCC-CcEEEEECCCCCHHHHHHHHHHHC------CCcEEEEeCCCcCc---ceECCeee----echHHHhhhcCCCCEEE
Confidence 344 789999 98 99999999999999 99865555543211 01257775 568999888 899999
Q ss_pred EeecchhHHHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCCCCC-cEEEeccCCchhhHH
Q 014863 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNI-GVIAVCPKGMGPSVR 245 (417)
Q Consensus 184 Lavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di-~VI~v~Pn~pg~~vr 245 (417)
+++|+..+.++++++... .-..+|.+++|+..+...+ .....+.. .+..+.||+||...+
T Consensus 77 I~vP~~~~~~~~~e~i~~-Gi~~iv~~t~G~~~~~~~~-l~~~a~~~~gi~liGPnc~Gii~p 137 (305)
T 2fp4_A 77 IYVPPPFAAAAINEAIDA-EVPLVVCITEGIPQQDMVR-VKHRLLRQGKTRLIGPNCPGVINP 137 (305)
T ss_dssp ECCCHHHHHHHHHHHHHT-TCSEEEECCCCCCHHHHHH-HHHHHTTCSSCEEECSSSCEEEET
T ss_pred EecCHHHHHHHHHHHHHC-CCCEEEEECCCCChHHHHH-HHHHHHhcCCcEEEeCCCCeEecc
Confidence 999999999999875542 2245688999997543111 01112233 455688999887743
No 149
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.26 E-value=2.2e-06 Score=83.66 Aligned_cols=85 Identities=19% Similarity=0.185 Sum_probs=63.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEE-EecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd 188 (417)
+||||||+|.||..++.+|++. .+++++. .++...+..+.+.+.|+. ..+.+++++ +.|+|++++|+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~D~V~i~tp~ 73 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGN-----ADARLVAVADAFPAAAEAIAGAYGCE-----VRTIDAIEAAADIDAVVICTPT 73 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHHTTCE-----ECCHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHhhC-----CCcEEEEEECCCHHHHHHHHHHhCCC-----cCCHHHHhcCCCCCEEEEeCCc
Confidence 6899999999999999999875 1566653 444433444556667765 468999987 89999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 014863 189 AAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
..+.++...... .|+.|.
T Consensus 74 ~~h~~~~~~al~---~gk~v~ 91 (331)
T 4hkt_A 74 DTHADLIERFAR---AGKAIF 91 (331)
T ss_dssp GGHHHHHHHHHH---TTCEEE
T ss_pred hhHHHHHHHHHH---cCCcEE
Confidence 999988766543 455433
No 150
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=98.25 E-value=1.5e-06 Score=84.86 Aligned_cols=117 Identities=15% Similarity=0.201 Sum_probs=78.9
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecc
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd 188 (417)
.||+|||+ |.||..++++|++. |++++...++..... ...|+.. ..+++|+.+ +.|++++++|+
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~------g~~~V~~V~p~~~g~---~~~G~~v----y~sl~el~~~~~~D~viI~tP~ 74 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAY------GTKMVGGVTPGKGGT---THLGLPV----FNTVREAVAATGATASVIYVPA 74 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTTC---EETTEEE----ESSHHHHHHHHCCCEEEECCCG
T ss_pred CEEEEECCCChHHHHHHHHHHHC------CCeEEEEeCCCcccc---eeCCeec----cCCHHHHhhcCCCCEEEEecCH
Confidence 78999999 99999999999998 888655554421100 1357664 568899887 89999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCCCCCcEEEeccCCchhh
Q 014863 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~ 243 (417)
..+.+++.+.... ....+|+++.|+..+...+ ....-+...+..+.||++|-.
T Consensus 75 ~~~~~~~~ea~~~-Gi~~iVi~t~G~~~~~~~~-l~~~A~~~gv~liGPNc~Gi~ 127 (288)
T 2nu8_A 75 PFCKDSILEAIDA-GIKLIITITEGIPTLDMLT-VKVKLDEAGVRMIGPNTPGVI 127 (288)
T ss_dssp GGHHHHHHHHHHT-TCSEEEECCCCCCHHHHHH-HHHHHHHHTCEEECSSCCEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEecCCccee
Confidence 9999999876553 2233566888997543111 001111123344678886655
No 151
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.25 E-value=2.4e-06 Score=84.32 Aligned_cols=87 Identities=9% Similarity=0.058 Sum_probs=64.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEE-ecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVG-LRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg-~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd 188 (417)
.||||||+|.||..++.+|++. ..+++++.. ++..++..+.+.+.|+.. ..+.+|+++ +.|+|++++|+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp~ 85 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKH----ADRAELIDVCDIDPAALKAAVERTGARG----HASLTDMLAQTDADIVILTTPS 85 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHT----TTTEEEEEEECSSHHHHHHHHHHHCCEE----ESCHHHHHHHCCCSEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhC----CCCeEEEEEEcCCHHHHHHHHHHcCCce----eCCHHHHhcCCCCCEEEECCCc
Confidence 6899999999999999999875 015666534 444344445566678764 678999986 79999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 014863 189 AAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
..+.++..... +.|+.|.
T Consensus 86 ~~h~~~~~~al---~~gk~v~ 103 (354)
T 3q2i_A 86 GLHPTQSIECS---EAGFHVM 103 (354)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHHH---HCCCCEE
Confidence 99988776543 3455443
No 152
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.24 E-value=4.9e-06 Score=73.00 Aligned_cols=115 Identities=10% Similarity=0.049 Sum_probs=77.8
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeec
Q 014863 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavp 187 (417)
++|+|||. |.+|..++++|++. |++|+ ....... .-.|... ..+++|+....|++++++|
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~------G~~v~-~Vnp~~~-----~i~G~~~----y~sl~~l~~~vDlvvi~vp 86 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEH------GYDVY-PVNPKYE-----EVLGRKC----YPSVLDIPDKIEVVDLFVK 86 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT------TCEEE-EECTTCS-----EETTEEC----BSSGGGCSSCCSEEEECSC
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHC------CCEEE-EECCCCC-----eECCeec----cCCHHHcCCCCCEEEEEeC
Confidence 89999999 79999999999999 98743 3332221 1146664 5678888888999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHH
Q 014863 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly 248 (417)
+..+.++++++...-. +.+ .+..|+.-..+.+ ..-..++++ +.||+++-...+++
T Consensus 87 ~~~~~~vv~~~~~~gi-~~i-~~~~g~~~~~l~~--~a~~~Gi~v--vGpnc~gv~~~~~~ 141 (144)
T 2d59_A 87 PKLTMEYVEQAIKKGA-KVV-WFQYNTYNREASK--KADEAGLII--VANRCMMREHERLL 141 (144)
T ss_dssp HHHHHHHHHHHHHHTC-SEE-EECTTCCCHHHHH--HHHHTTCEE--EESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CEE-EECCCchHHHHHH--HHHHcCCEE--EcCCchhhcchhhc
Confidence 9999999988665432 234 4555553111111 011235554 45999998876664
No 153
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.23 E-value=3e-06 Score=83.02 Aligned_cols=80 Identities=14% Similarity=0.151 Sum_probs=61.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEE-EecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd 188 (417)
.||||||+|.||..++.+|++. .+.+++. .++..++..+.+.+.|+.. ...+.++++. +.|+|++++|+
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 77 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRES-----AQAEVRGIASRRLENAQKMAKELAIPV---AYGSYEELCKDETIDIIYIPTYN 77 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHS-----SSEEEEEEBCSSSHHHHHHHHHTTCCC---CBSSHHHHHHCTTCSEEEECCCG
T ss_pred EEEEEECchHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHHHcCCCc---eeCCHHHHhcCCCCCEEEEcCCC
Confidence 5899999999999999999885 1566653 3444444456666777731 2678999987 89999999999
Q ss_pred hhHHHHHHHHH
Q 014863 189 AAQADNYEKIF 199 (417)
Q Consensus 189 ~a~~~Vl~eI~ 199 (417)
..+.++....+
T Consensus 78 ~~h~~~~~~al 88 (330)
T 3e9m_A 78 QGHYSAAKLAL 88 (330)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988876544
No 154
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.22 E-value=1.6e-06 Score=84.59 Aligned_cols=117 Identities=15% Similarity=0.199 Sum_probs=80.5
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecc
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd 188 (417)
+||+|+|+ |+||..+++++++. |++++....+..... .-.|+.. ..+++|+.+ .+|++++++|+
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~------g~~~v~~VnP~~~g~---~i~G~~v----y~sl~el~~~~~~Dv~Ii~vp~ 74 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTY------GTKIVAGVTPGKGGM---EVLGVPV----YDTVKEAVAHHEVDASIIFVPA 74 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTTC---EETTEEE----ESSHHHHHHHSCCSEEEECCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHHc------CCeEEEEECCCCCCc---eECCEEe----eCCHHHHhhcCCCCEEEEecCH
Confidence 78999998 99999999999998 988655555432100 1357765 568899888 89999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCCCCCcEEEeccCCchhh
Q 014863 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~ 243 (417)
..+.+++++.... .-..+|+++.||......+ .....+...+..+.||++|-.
T Consensus 75 ~~~~~~~~ea~~~-Gi~~vVi~t~G~~~~~~~~-l~~~a~~~gi~vigPNc~Gii 127 (288)
T 1oi7_A 75 PAAADAALEAAHA-GIPLIVLITEGIPTLDMVR-AVEEIKALGSRLIGGNCPGII 127 (288)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECCSCCCHHHHHH-HHHHHHHHTCEEEESSSCEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEeCCCCeEE
Confidence 9999999886553 2234677899997532111 001111223445668887665
No 155
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.22 E-value=1.8e-06 Score=87.75 Aligned_cols=97 Identities=13% Similarity=0.075 Sum_probs=71.4
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecC---------CC----------
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---------GT---------- 168 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d---------~~---------- 168 (417)
+.+ .||+|||.|.+|...++.++.. |.+|++.+++. ...+.+.+.|....+ +.
T Consensus 182 v~~-~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~-~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~ 253 (381)
T 3p2y_A 182 VKP-ASALVLGVGVAGLQALATAKRL------GAKTTGYDVRP-EVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERA 253 (381)
T ss_dssp ECC-CEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSG-GGHHHHHHTTCEECCCC-------------CHHHHH
T ss_pred cCC-CEEEEECchHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHcCCeEEeccccccccccchhhhhHHHHh
Confidence 466 8999999999999999999998 99988776654 446667777765310 00
Q ss_pred --cCCHHhhhccCCeEEEee--cchhHHHHH-HHHHhcCCCCcEEEEec
Q 014863 169 --LGDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 169 --~~~~~Eav~~ADiViLav--pd~a~~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
..+++++++++|+||.++ |......++ ++....||+|++|++++
T Consensus 254 ~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 254 QQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred hhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 114568899999999886 433333333 57888899999999886
No 156
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.20 E-value=3.2e-06 Score=83.06 Aligned_cols=86 Identities=17% Similarity=0.120 Sum_probs=62.8
Q ss_pred CEEEEEcccchHHHHHHHHH-hhhhhhcCCceEEE-EecCCchhHHHHHHcCc--eecCCCcCCHHhhhcc--CCeEEEe
Q 014863 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKV-GLRKGSRSFAEARAAGF--TEENGTLGDIYETISG--SDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr-~s~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~--~~~d~~~~~~~Eav~~--ADiViLa 185 (417)
.||||||+|.||..++.+|+ .. .+.+++. .++..++..+.+.+.|+ .. ..+.++++++ .|+|+++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~-----~~~~l~av~d~~~~~~~~~~~~~g~~~~~----~~~~~~ll~~~~~D~V~i~ 73 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKL-----SGAEIVAVTDVNQEAAQKVVEQYQLNATV----YPNDDSLLADENVDAVLVT 73 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTC-----SSEEEEEEECSSHHHHHHHHHHTTCCCEE----ESSHHHHHHCTTCCEEEEC
T ss_pred EEEEEECccHHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCCee----eCCHHHHhcCCCCCEEEEC
Confidence 58999999999999999998 42 1566653 34443444556667773 33 6789999876 9999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEE
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+|+..+.++....+ +.|+.|.
T Consensus 74 tp~~~h~~~~~~al---~~Gk~vl 94 (344)
T 3mz0_A 74 SWGPAHESSVLKAI---KAQKYVF 94 (344)
T ss_dssp SCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCchhHHHHHHHHH---HCCCcEE
Confidence 99999988876543 4555443
No 157
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.19 E-value=5.9e-06 Score=72.04 Aligned_cols=101 Identities=15% Similarity=0.076 Sum_probs=64.6
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHH-HcCceecCCCcCCH---Hhh-hccC
Q 014863 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEENGTLGDI---YET-ISGS 179 (417)
Q Consensus 105 ~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~-~~G~~~~d~~~~~~---~Ea-v~~A 179 (417)
++...+ ++|.|||+|.+|..+++.|+.. |++|++..+...+ .+.+. ..|.........+. .++ +.++
T Consensus 14 ~~~~~~-~~v~IiG~G~iG~~la~~L~~~------g~~V~vid~~~~~-~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 14 SKKQKS-KYIVIFGCGRLGSLIANLASSS------GHSVVVVDKNEYA-FHRLNSEFSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp ---CCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCGGG-GGGSCTTCCSEEEESCTTSHHHHHTTTGGGC
T ss_pred hcccCC-CcEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHH-HHHHHhcCCCcEEEecCCCHHHHHHcCcccC
Confidence 567778 9999999999999999999998 9988877765433 33443 45643211111222 223 6789
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCc-EEEEecc
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPNS-ILGLSHG 213 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~Ga-iL~~a~G 213 (417)
|+||+++|+......+..+...+.+.. ++..+.+
T Consensus 86 d~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 86 DMVFAFTNDDSTNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp SEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 999999998777665555555443333 4444443
No 158
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.19 E-value=1.2e-05 Score=68.51 Aligned_cols=94 Identities=16% Similarity=0.053 Sum_probs=62.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHh---h-hccCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE---T-ISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~E---a-v~~ADiViLavp 187 (417)
++|.|+|+|.+|.++++.|.+. |++|++.++. +...+.+.+.|+....+...+.+. + +.++|+|++++|
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~------g~~V~~id~~-~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA------GKKVLAVDKS-KEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESC-HHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 7899999999999999999999 9988776654 445566666776432111223322 1 468999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEec
Q 014863 188 DAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+......+-.....+....++..+.
T Consensus 80 ~~~~n~~~~~~a~~~~~~~iia~~~ 104 (141)
T 3llv_A 80 DDEFNLKILKALRSVSDVYAIVRVS 104 (141)
T ss_dssp CHHHHHHHHHHHHHHCCCCEEEEES
T ss_pred CHHHHHHHHHHHHHhCCceEEEEEc
Confidence 7665443334333343444555443
No 159
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.18 E-value=2.4e-06 Score=83.98 Aligned_cols=86 Identities=24% Similarity=0.262 Sum_probs=62.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEE-EecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd 188 (417)
.||||||+|.||..++.+|++. .+.+++. .++...+..+.+.+.|+.. ...+.+++++ +.|+|++++|+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMI-----DDAILYAISDVREDRLREMKEKLGVEK---AYKDPHELIEDPNVDAVLVCSST 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGS-----TTEEEEEEECSCHHHHHHHHHHHTCSE---EESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEcCCHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHhCCCc---eeCCHHHHhcCCCCCEEEEcCCC
Confidence 6899999999999999999774 1566653 3444344445566677631 1578999987 89999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEE
Q 014863 189 AAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL 208 (417)
..+.++....+ +.|+.|
T Consensus 75 ~~h~~~~~~al---~~gk~v 91 (344)
T 3ezy_A 75 NTHSELVIACA---KAKKHV 91 (344)
T ss_dssp GGHHHHHHHHH---HTTCEE
T ss_pred cchHHHHHHHH---hcCCeE
Confidence 99988776544 345543
No 160
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.17 E-value=3.8e-06 Score=81.74 Aligned_cols=87 Identities=15% Similarity=0.120 Sum_probs=61.7
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEE-EEecCCchhHHHHHHcCceecCCCcCCHHhhh-ccCCeEEEeecc
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISD 188 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav-~~ADiViLavpd 188 (417)
|+||||||+|.||..++.+|++. .+.+++ +.++..++..+.+.+.|... ...+.++++ ++.|+|++++|+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-----~~~~~~~v~d~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~D~V~i~tp~ 72 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-----GEYQLVAIYSRKLETAATFASRYQNIQ---LFDQLEVFFKSSFDLVYIASPN 72 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TSEEEEEEECSSHHHHHHHGGGSSSCE---EESCHHHHHTSSCSEEEECSCG
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-----CCeEEEEEEeCCHHHHHHHHHHcCCCe---EeCCHHHHhCCCCCEEEEeCCh
Confidence 46899999999999999999875 045654 33443333334455566521 156889998 789999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEE
Q 014863 189 AAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL 208 (417)
..+.++..... +.|+.|
T Consensus 73 ~~h~~~~~~al---~~gk~V 89 (325)
T 2ho3_A 73 SLHFAQAKAAL---SAGKHV 89 (325)
T ss_dssp GGHHHHHHHHH---HTTCEE
T ss_pred HHHHHHHHHHH---HcCCcE
Confidence 99988876543 456643
No 161
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.17 E-value=2.6e-06 Score=89.23 Aligned_cols=88 Identities=9% Similarity=0.207 Sum_probs=71.7
Q ss_pred cchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhcccCchhh---hhhhhhhccChhHHHHHH
Q 014863 310 LGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKK---EFEKAYSASYYPCMEILY 386 (417)
Q Consensus 310 ~G~~~a~iea~~~~~v~~Gl~~e~A~~~~~~~l~~~~~~li~e~G~~~l~~~vs~~~~~---~~~~~~~~~~~~~~~~m~ 386 (417)
+|.-.+.+.|.||.+.++|++|.+++++++++.++.+.+++.++|+++|+|+||++.+. .|...|. +- ..+
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~ 467 (525)
T 3fr7_A 394 AGVYVALMMAQIEVLRKKGHSYSEIINESVIESVDSLNPFMHARGVAFMVDNCSTTARLGSRKWAPRFD---YI---LTQ 467 (525)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHTHHHHHTHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHH---HH---HHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHhhhHHHHHHHhhhhhhhhhhhHHHHhhccHhhhcccccchHhHH---HH---HHH
Confidence 56666799999999999999999999999999999999999999999999999976542 2333222 22 237
Q ss_pred HHHHhhhcchhH-HHHHH
Q 014863 387 ECYEDVAAGSEI-RSVVL 403 (417)
Q Consensus 387 ~~~~~v~~g~~~-~~~~~ 403 (417)
++|..|.+|..+ |+++.
T Consensus 468 ~~~~~~~~~~~~~~~~~~ 485 (525)
T 3fr7_A 468 QAFVTVDKDAPINQDLIS 485 (525)
T ss_dssp THHHHHHTTCCCCHHHHH
T ss_pred HhHHHhhcCCcchHHHHH
Confidence 999999999988 44443
No 162
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.15 E-value=2e-06 Score=84.90 Aligned_cols=91 Identities=15% Similarity=0.210 Sum_probs=66.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHH----cCceecCCCcCCHHhhhccCCeEEEee
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA----AGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~----~G~~~~d~~~~~~~Eav~~ADiViLav 186 (417)
++|+|||+|.||.+++++|+... +. +|.+++|+ +..+.+.+ .|+... .+ +.++++++||+|++||
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~-----~~~~V~v~~r~--~a~~la~~l~~~~g~~~~--~~-~~~eav~~aDIVi~aT 191 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARF-----ALEAILVHDPY--ASPEILERIGRRCGVPAR--MA-APADIAAQADIVVTAT 191 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS-----CCCEEEEECTT--CCHHHHHHHHHHHTSCEE--EC-CHHHHHHHCSEEEECC
T ss_pred cEEEEECccHHHHHHHHHHHHhC-----CCcEEEEECCc--HHHHHHHHHHHhcCCeEE--Ee-CHHHHHhhCCEEEEcc
Confidence 89999999999999999998741 33 68888877 44444443 365321 14 8999999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEeccchh
Q 014863 187 SDAAQADNYEKIFSCMKPNSILGLSHGFLL 216 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i 216 (417)
|... .++. .+.+++|++|++++.+..
T Consensus 192 ~s~~--pvl~--~~~l~~G~~V~~vGs~~p 217 (313)
T 3hdj_A 192 RSTT--PLFA--GQALRAGAFVGAIGSSLP 217 (313)
T ss_dssp CCSS--CSSC--GGGCCTTCEEEECCCSST
T ss_pred CCCC--cccC--HHHcCCCcEEEECCCCCC
Confidence 9742 2332 356899999988876643
No 163
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.14 E-value=6.2e-06 Score=72.13 Aligned_cols=117 Identities=13% Similarity=0.080 Sum_probs=77.2
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeec
Q 014863 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavp 187 (417)
++|+|||. |++|..++++|++. |++|+ .... .+..+ .-.|... ..+++|+....|++++++|
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~------G~~v~-~vnp-~~~~~--~i~G~~~----~~sl~el~~~vDlavi~vp 79 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ------GYRVL-PVNP-RFQGE--ELFGEEA----VASLLDLKEPVDILDVFRP 79 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT------TCEEE-EECG-GGTTS--EETTEEC----BSSGGGCCSCCSEEEECSC
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHC------CCEEE-EeCC-CcccC--cCCCEEe----cCCHHHCCCCCCEEEEEeC
Confidence 89999999 89999999999999 98743 2222 11000 1146664 5678888888999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCCCCCcEEEeccCCchhhHHHHH
Q 014863 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr~ly 248 (417)
+....++++++...-- +.++...+.+.-...+. .-..+++++ .||+++-...++.
T Consensus 80 ~~~~~~v~~~~~~~gi-~~i~~~~g~~~~~~~~~---a~~~Gir~v--gpnc~g~~~~~~~ 134 (140)
T 1iuk_A 80 PSALMDHLPEVLALRP-GLVWLQSGIRHPEFEKA---LKEAGIPVV--ADRCLMVEHKRLF 134 (140)
T ss_dssp HHHHTTTHHHHHHHCC-SCEEECTTCCCHHHHHH---HHHTTCCEE--ESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CEEEEcCCcCHHHHHHH---HHHcCCEEE--cCCccceEChhhc
Confidence 9988899988665432 34555444443221111 102355654 6999998865554
No 164
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.13 E-value=5.4e-06 Score=81.51 Aligned_cols=93 Identities=22% Similarity=0.280 Sum_probs=60.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHH--cC------ceecCCCcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~d~~~~~~~Eav~~ADi 181 (417)
|||+|||.|+||.++|..|... |+ +|++.++...+....+.. .+ .... ..+ .+++++||+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~------g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~---~~d-~~~~~~aDv 70 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK------GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY---AGD-YADLKGSDV 70 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE---ECC-GGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE---eCC-HHHhCCCCE
Confidence 5899999999999999999998 88 887766653322222211 11 1110 234 467899999
Q ss_pred EEEeecchh----------------HHHHHHHHHhcCCCCcE-EEEeccch
Q 014863 182 VLLLISDAA----------------QADNYEKIFSCMKPNSI-LGLSHGFL 215 (417)
Q Consensus 182 ViLavpd~a----------------~~~Vl~eI~p~Lk~Gai-L~~a~G~~ 215 (417)
||+++|... ..++++.|.++. |+.+ |.++-+..
T Consensus 71 Viiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 71 VIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVD 120 (319)
T ss_dssp EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHH
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHH
Confidence 999999643 245666677764 5554 44444554
No 165
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.13 E-value=6.1e-06 Score=80.18 Aligned_cols=86 Identities=15% Similarity=0.156 Sum_probs=62.3
Q ss_pred CEEEEEcccchHHHH-HHHHHhhhhhhcCCceEEE-EecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQ-AQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~Ai-A~~Lr~s~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavp 187 (417)
+||||||+|.||..+ +.+|++. +.+++. .++..++..+.+.+.|... ...+.+++++ ++|+|++++|
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~------~~~~vav~d~~~~~~~~~~~~~g~~~---~~~~~~~~l~~~~~D~V~i~tp 71 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT------GGEVVSMMSTSAERGAAYATENGIGK---SVTSVEELVGDPDVDAVYVSTT 71 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT------TCEEEEEECSCHHHHHHHHHHTTCSC---CBSCHHHHHTCTTCCEEEECSC
T ss_pred CeEEEEcccHHHHHhhhHHhhcC------CCeEEEEECCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 489999999999998 8888775 777654 4444334445566677641 1568889886 5999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 014863 188 DAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+..+.++.... |+.|+.|.
T Consensus 72 ~~~h~~~~~~a---l~~Gk~v~ 90 (332)
T 2glx_A 72 NELHREQTLAA---IRAGKHVL 90 (332)
T ss_dssp GGGHHHHHHHH---HHTTCEEE
T ss_pred hhHhHHHHHHH---HHCCCeEE
Confidence 99998877654 34566443
No 166
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.12 E-value=1.6e-05 Score=68.36 Aligned_cols=75 Identities=21% Similarity=0.268 Sum_probs=55.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHH---h-hhccCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---E-TISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~---E-av~~ADiViLavp 187 (417)
++|.|||+|.+|..+++.|++. |++|++.++. ....+.+.+.|+....+...+.+ + -+.++|+|++++|
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~~-~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS------DIPLVVIETS-RTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEESC-HHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 5799999999999999999999 9988776655 45566677778753211122221 2 2578999999999
Q ss_pred chhHHH
Q 014863 188 DAAQAD 193 (417)
Q Consensus 188 d~a~~~ 193 (417)
+.....
T Consensus 81 ~~~~n~ 86 (140)
T 3fwz_A 81 NGYEAG 86 (140)
T ss_dssp CHHHHH
T ss_pred ChHHHH
Confidence 877654
No 167
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.11 E-value=4.5e-06 Score=82.31 Aligned_cols=86 Identities=10% Similarity=0.130 Sum_probs=63.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEE-ecCCchhHHHHHHcCceecCCCcCCHHhhh--ccCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVG-LRKGSRSFAEARAAGFTEENGTLGDIYETI--SGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg-~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav--~~ADiViLavpd 188 (417)
.||||||+|.||..++.+|++. .+++++.. ++...+..+.+.+.|+.. ..+.++++ .+.|+|++++|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~~l~~~~~D~V~i~tp~ 76 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKS-----EKLKLVTCYSRTEDKREKFGKRYNCAG----DATMEALLAREDVEMVIITVPN 76 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEECSSHHHHHHHHHHHTCCC----CSSHHHHHHCSSCCEEEECSCT
T ss_pred ceEEEEccCHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHhcCCCCCEEEEeCCh
Confidence 5899999999999999999765 15665533 444334445566678764 67899999 679999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 014863 189 AAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
..+.++....+ +.|+.|.
T Consensus 77 ~~h~~~~~~al---~~gk~vl 94 (354)
T 3db2_A 77 DKHAEVIEQCA---RSGKHIY 94 (354)
T ss_dssp TSHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHHH---HcCCEEE
Confidence 99988776543 3455443
No 168
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.10 E-value=3.6e-06 Score=84.80 Aligned_cols=99 Identities=16% Similarity=0.099 Sum_probs=68.8
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-cCcee--cCCCcCCHHhhhccCCeE
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTE--ENGTLGDIYETISGSDLV 182 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-~G~~~--~d~~~~~~~Eav~~ADiV 182 (417)
..+.| ++|+|||+|.+|.++++.++.. |.+|++.++. ....+.+.+ .|... ......+.++.++++|+|
T Consensus 164 ~~l~g-~~V~ViG~G~iG~~~a~~a~~~------Ga~V~~~d~~-~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvV 235 (377)
T 2vhw_A 164 PGVEP-ADVVVIGAGTAGYNAARIANGM------GATVTVLDIN-IDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLV 235 (377)
T ss_dssp TTBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESC-HHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCC-HHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEE
Confidence 46889 9999999999999999999988 9988776665 333444444 45421 000012466788899999
Q ss_pred EEeecchh--HHHH-HHHHHhcCCCCcEEEEec
Q 014863 183 LLLISDAA--QADN-YEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 183 iLavpd~a--~~~V-l~eI~p~Lk~GaiL~~a~ 212 (417)
|.+++... ...+ .++..+.|++|.+|++++
T Consensus 236 i~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 236 IGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp EECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred EECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 99885322 1222 356678899999988775
No 169
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.08 E-value=4.5e-06 Score=85.48 Aligned_cols=97 Identities=19% Similarity=0.174 Sum_probs=71.1
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecC-------------CCc-----
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-------------GTL----- 169 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d-------------~~~----- 169 (417)
+.+ .||+|||+|.+|...++.++.. |.+|++++++.. ..+.+.+.|..... +..
T Consensus 188 v~~-~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~-~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~ 259 (405)
T 4dio_A 188 VPA-AKIFVMGAGVAGLQAIATARRL------GAVVSATDVRPA-AKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSG 259 (405)
T ss_dssp ECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSTT-HHHHHHHTTCEECCCCC-----------------C
T ss_pred cCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEcCCHH-HHHHHHHcCCceeecccccccccccccchhhhcch
Confidence 566 8999999999999999999988 999887766643 45666667764200 001
Q ss_pred -------CCHHhhhccCCeEEEee--cchhHHHHH-HHHHhcCCCCcEEEEec
Q 014863 170 -------GDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 170 -------~~~~Eav~~ADiViLav--pd~a~~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
.++++++++||+||.++ |....+.++ ++....||+|++|++++
T Consensus 260 ~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 260 EYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 14678899999999885 543333333 57888999999999886
No 170
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.08 E-value=1e-05 Score=80.29 Aligned_cols=86 Identities=12% Similarity=0.144 Sum_probs=64.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecch
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd~ 189 (417)
.||||||+|.||..++.+|+.. .+++++...+.+....+.+.+.|+.. ..+.++++. +.|+|++++|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~a~~~g~~~----~~~~~~ll~~~~~D~V~i~tp~~ 76 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAA-----DNLEVHGVFDILAEKREAAAQKGLKI----YESYEAVLADEKVDAVLIATPND 76 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-----TTEEEEEEECSSHHHHHHHHTTTCCB----CSCHHHHHHCTTCCEEEECSCGG
T ss_pred CcEEEECcCHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHhcCCce----eCCHHHHhcCCCCCEEEEcCCcH
Confidence 5899999999999999999875 15566544455455556677778764 678999987 789999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEE
Q 014863 190 AQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 190 a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
.+.++....+ +.|+.|.
T Consensus 77 ~h~~~~~~al---~aGkhVl 93 (359)
T 3e18_A 77 SHKELAISAL---EAGKHVV 93 (359)
T ss_dssp GHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHH---HCCCCEE
Confidence 9988876544 3566443
No 171
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.07 E-value=1.2e-05 Score=78.46 Aligned_cols=86 Identities=14% Similarity=0.138 Sum_probs=61.6
Q ss_pred CEEEEEcccchHHHHHHHHH-hhhhhhcCCceEEEEecCCc-hhHHHHHHcCc-eecCCCcCCHHhhhc--cCCeEEEee
Q 014863 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGS-RSFAEARAAGF-TEENGTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr-~s~~~~~~G~~Vivg~r~~~-~s~~~A~~~G~-~~~d~~~~~~~Eav~--~ADiViLav 186 (417)
.||||||+|.||..++..|+ .. .+++++...+.+. +..+.+.+.|. .. ..+.+++++ ++|+|++++
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~-----~~~~~vav~d~~~~~~~~~a~~~g~~~~----~~~~~~~l~~~~~D~V~i~t 79 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKI-----QGVKLVAACALDSNQLEWAKNELGVETT----YTNYKDMIDTENIDAIFIVA 79 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTC-----SSEEEEEEECSCHHHHHHHHHTTCCSEE----ESCHHHHHTTSCCSEEEECS
T ss_pred ceEEEEcCCHHHHHHHHHHHhcC-----CCcEEEEEecCCHHHHHHHHHHhCCCcc----cCCHHHHhcCCCCCEEEEeC
Confidence 68999999999999999998 43 1566544444433 33344556676 32 568889886 699999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEE
Q 014863 187 SDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
|+..+.++.... |+.|+.|.
T Consensus 80 p~~~h~~~~~~a---l~~G~~v~ 99 (346)
T 3cea_A 80 PTPFHPEMTIYA---MNAGLNVF 99 (346)
T ss_dssp CGGGHHHHHHHH---HHTTCEEE
T ss_pred ChHhHHHHHHHH---HHCCCEEE
Confidence 999998877654 34566544
No 172
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.06 E-value=2.3e-05 Score=69.72 Aligned_cols=93 Identities=15% Similarity=0.098 Sum_probs=60.3
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC---HHhh--hccCC
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET--ISGSD 180 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~Ea--v~~AD 180 (417)
..+.+ ++|.|||+|.+|..+++.|++.- |++|++.+++ ....+.+.+.|+....+...+ ..++ +.++|
T Consensus 35 ~~~~~-~~v~IiG~G~~G~~~a~~L~~~~-----g~~V~vid~~-~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad 107 (183)
T 3c85_A 35 INPGH-AQVLILGMGRIGTGAYDELRARY-----GKISLGIEIR-EEAAQQHRSEGRNVISGDATDPDFWERILDTGHVK 107 (183)
T ss_dssp BCCTT-CSEEEECCSHHHHHHHHHHHHHH-----CSCEEEEESC-HHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCC
T ss_pred cCCCC-CcEEEECCCHHHHHHHHHHHhcc-----CCeEEEEECC-HHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCC
Confidence 44667 89999999999999999997630 5777776665 444566666776421111223 2344 67899
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCC
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPN 205 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~G 205 (417)
+||+++|+......+-.....+.++
T Consensus 108 ~vi~~~~~~~~~~~~~~~~~~~~~~ 132 (183)
T 3c85_A 108 LVLLAMPHHQGNQTALEQLQRRNYK 132 (183)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCChHHHHHHHHHHHHHCCC
Confidence 9999999866543332333334433
No 173
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.06 E-value=1.1e-05 Score=80.09 Aligned_cols=86 Identities=21% Similarity=0.238 Sum_probs=63.1
Q ss_pred CEEEEEcccchHHHHHHHHH-hhhhhhcCCceEE-EEecCCchhHHHHHHcC--ceecCCCcCCHHhhhc--cCCeEEEe
Q 014863 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVK-VGLRKGSRSFAEARAAG--FTEENGTLGDIYETIS--GSDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr-~s~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G--~~~~d~~~~~~~Eav~--~ADiViLa 185 (417)
.||||||+|.||..++.+|+ .. .+.+++ +.++...+..+.+.+.| ... ..+.+++++ +.|+|+++
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~-----~~~~lvav~d~~~~~~~~~a~~~g~~~~~----~~~~~~ll~~~~~D~V~i~ 94 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTV-----SGVEVVAVCDIVAGRAQAALDKYAIEAKD----YNDYHDLINDKDVEVVIIT 94 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTC-----TTEEEEEEECSSTTHHHHHHHHHTCCCEE----ESSHHHHHHCTTCCEEEEC
T ss_pred eeEEEECCcHHHHHHHHHHHhhC-----CCcEEEEEEeCCHHHHHHHHHHhCCCCee----eCCHHHHhcCCCCCEEEEc
Confidence 58999999999999999998 42 156665 34444445556677777 333 678999887 58999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEE
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+|+..+.++....+ +.|+-|.
T Consensus 95 tp~~~h~~~~~~al---~aGk~Vl 115 (357)
T 3ec7_A 95 ASNEAHADVAVAAL---NANKYVF 115 (357)
T ss_dssp SCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCcHHHHHHHHHHH---HCCCCEE
Confidence 99999988776544 3455443
No 174
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.05 E-value=1.2e-05 Score=78.04 Aligned_cols=85 Identities=15% Similarity=0.173 Sum_probs=61.2
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCceEE-EEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch
Q 014863 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~ 189 (417)
+||||||+|.||.. ++..|++. .+++++ +.++...+..+.+.+.|+.. ..+.+++.++.|+|++++|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~l~~~~D~V~i~tp~~ 76 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAA-----SDWTLQGAWSPTRAKALPICESWRIPY----ADSLSSLAASCDAVFVHSSTA 76 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSC-----SSEEEEEEECSSCTTHHHHHHHHTCCB----CSSHHHHHTTCSEEEECSCTT
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCc----cCcHHHhhcCCCEEEEeCCch
Confidence 68999999999996 88888763 156665 44554444445566667653 567777667899999999999
Q ss_pred hHHHHHHHHHhcCCCCcEE
Q 014863 190 AQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 190 a~~~Vl~eI~p~Lk~GaiL 208 (417)
.+.++....+ +.|+.|
T Consensus 77 ~h~~~~~~al---~~G~~v 92 (319)
T 1tlt_A 77 SHFDVVSTLL---NAGVHV 92 (319)
T ss_dssp HHHHHHHHHH---HTTCEE
T ss_pred hHHHHHHHHH---HcCCeE
Confidence 9988776543 456543
No 175
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.05 E-value=1.4e-05 Score=64.81 Aligned_cols=91 Identities=16% Similarity=0.051 Sum_probs=61.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC-ceEEEEecCCchhHHHHHHcCceecCCCcC---CHHhhhccCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLG---DIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~---~~~Eav~~ADiViLavp 187 (417)
++|+|+|.|.||.++++.|.+. | ++|++..|+. ...+.....|+........ +..++++++|+||.++|
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~------g~~~v~~~~r~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS------SNYSVTVADHDL-AALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC------SSEEEEEEESCH-HHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCH-HHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence 8999999999999999999998 8 7887777653 3344444455432111122 24467789999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEec
Q 014863 188 DAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
......+++.... .|...++..
T Consensus 79 ~~~~~~~~~~~~~---~g~~~~~~~ 100 (118)
T 3ic5_A 79 FFLTPIIAKAAKA---AGAHYFDLT 100 (118)
T ss_dssp GGGHHHHHHHHHH---TTCEEECCC
T ss_pred chhhHHHHHHHHH---hCCCEEEec
Confidence 8877666665433 454444443
No 176
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.04 E-value=1.7e-05 Score=66.53 Aligned_cols=98 Identities=12% Similarity=0.070 Sum_probs=59.7
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHH---hh-hccCCeEE
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ET-ISGSDLVL 183 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~---Ea-v~~ADiVi 183 (417)
+++ ++|.|+|+|.+|..+++.|++. |++|++.++. ....+.+.+.|.........+.+ ++ +.++|+|+
T Consensus 4 ~~~-~~v~I~G~G~iG~~~a~~l~~~------g~~v~~~d~~-~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 4 IKN-KQFAVIGLGRFGGSIVKELHRM------GHEVLAVDIN-EEKVNAYASYATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp --C-CSEEEECCSHHHHHHHHHHHHT------TCCCEEEESC-HHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CcC-CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 445 7899999999999999999998 8887776654 33333333445432111122322 22 67899999
Q ss_pred Eeecch-hHHHHHHHHHhcCCCCcEEEEecc
Q 014863 184 LLISDA-AQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 184 Lavpd~-a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
+++++. .....+......+.+..++..+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 76 VAIGANIQASTLTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp ECCCSCHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred ECCCCchHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 999975 332233344444555555555544
No 177
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=98.03 E-value=0.00016 Score=74.87 Aligned_cols=198 Identities=13% Similarity=0.142 Sum_probs=111.4
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHH-------------------HHHcCceecCCCcCC
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-------------------ARAAGFTEENGTLGD 171 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~-------------------A~~~G~~~~d~~~~~ 171 (417)
|.+|+|||+|-+|..+|..|.+. |++|+ |.+.+++..+. +.+.|-.. ...+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~------G~~V~-g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~---~tt~ 90 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL------GHRVV-GYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLS---FAES 90 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEE---ECSS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCcEE-EEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCee---EEcC
Confidence 47999999999999999999999 99875 56655433222 22233111 1457
Q ss_pred HHhhhccCCeEEEeecc----------hhHHHHHHHHHhcCC---CCcEEEEec----cch--h-h-hhhccccCCCCCC
Q 014863 172 IYETISGSDLVLLLISD----------AAQADNYEKIFSCMK---PNSILGLSH----GFL--L-G-HLQSMGLDFPKNI 230 (417)
Q Consensus 172 ~~Eav~~ADiViLavpd----------~a~~~Vl~eI~p~Lk---~GaiL~~a~----G~~--i-~-~~~~~~i~~~~di 230 (417)
.++++++||++|+|||. .....+.+.|.++|+ +|++|++-+ |.. + . .+++ . ..+.
T Consensus 91 ~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~---~-~~~~ 166 (444)
T 3vtf_A 91 AEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAE---E-AGGV 166 (444)
T ss_dssp HHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHT---T-TTTC
T ss_pred HHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHH---h-CCCC
Confidence 88999999999999872 123456677888886 467776543 443 1 1 1222 1 1233
Q ss_pred cE-EEeccC--CchhhHHHHHhhcccccCCCceEEEeecCCCCHHHHHHHHHHHHHhCCCcccccchhhhhhhhcccccc
Q 014863 231 GV-IAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERG 307 (417)
Q Consensus 231 ~V-I~v~Pn--~pg~~vr~ly~~G~e~~G~Gv~~liav~qd~sgea~e~a~al~~aiG~~~~iett~~~E~~~dlfgeqt 307 (417)
++ +...|. -||..++++..- +-++. . ..+.++.+.+..+...+....+ .++. .+-++..+-+.+
T Consensus 167 ~f~v~~~PErl~eG~a~~d~~~~---------~riVi-G-~~~~~a~~~~~~ly~~~~~~~~-~~~~-~~AE~~Kl~eN~ 233 (444)
T 3vtf_A 167 KFSVASNPEFLREGSALEDFFKP---------DRIVI-G-AGDERAASFLLDVYKAVDAPKL-VMKP-REAELVKYASNV 233 (444)
T ss_dssp CCEEEECCCCCCTTSHHHHHHSC---------SCEEE-E-ESSHHHHHHHHHHTTTSCSCEE-EECH-HHHHHHHHHHHH
T ss_pred CceeecCcccccCCccccccccC---------CcEEE-c-CCCHHHHHHHHHHHhccCCCEE-Eech-hHHHHHHHHHHH
Confidence 33 555663 456666555542 21221 1 1245677777888777765422 2222 111222222222
Q ss_pred cccchHHHHHHHHHHHHHHcCCCHHHHHH
Q 014863 308 ILLGAVHGIVESLFRRFTENGMNEDLAYK 336 (417)
Q Consensus 308 vL~G~~~a~iea~~~~~v~~Gl~~e~A~~ 336 (417)
-+ ..=-+++..+...+-+.|++..+..+
T Consensus 234 ~r-avnIa~~NEla~ice~~GiDv~eV~~ 261 (444)
T 3vtf_A 234 FL-ALKISFANEVGLLAKRLGVDTYRVFE 261 (444)
T ss_dssp HH-HHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 11 11122566666666777777655544
No 178
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.03 E-value=9.4e-06 Score=79.02 Aligned_cols=84 Identities=18% Similarity=0.129 Sum_probs=58.9
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhh-ccCCeEEEeecch
Q 014863 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav-~~ADiViLavpd~ 189 (417)
+||||||+|.||. .++.+|+.. .+.++++.++..++..+.+.+.|+.. ...+..+++ +++|+|++++|+.
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~-----~~~~l~v~d~~~~~~~~~a~~~g~~~---~~~~~~~~l~~~~D~V~i~tp~~ 74 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQW-----PDIELVLCTRNPKVLGTLATRYRVSA---TCTDYRDVLQYGVDAVMIHAATD 74 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTS-----TTEEEEEECSCHHHHHHHHHHTTCCC---CCSSTTGGGGGCCSEEEECSCGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhC-----CCceEEEEeCCHHHHHHHHHHcCCCc---cccCHHHHhhcCCCEEEEECCch
Confidence 5899999999998 599998764 15676655554444445566677641 023445555 7899999999999
Q ss_pred hHHHHHHHHHhcCCCCc
Q 014863 190 AQADNYEKIFSCMKPNS 206 (417)
Q Consensus 190 a~~~Vl~eI~p~Lk~Ga 206 (417)
.+.++....+ +.|+
T Consensus 75 ~h~~~~~~al---~~Gk 88 (323)
T 1xea_A 75 VHSTLAAFFL---HLGI 88 (323)
T ss_dssp GHHHHHHHHH---HTTC
T ss_pred hHHHHHHHHH---HCCC
Confidence 9988876543 3455
No 179
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.02 E-value=8.5e-06 Score=79.64 Aligned_cols=87 Identities=11% Similarity=0.090 Sum_probs=61.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEE-EEecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd 188 (417)
.||||||+|.||..++.+|+.. .+.+++ +.++...+..+.+.+.|+.. ...+.++++. +.|+|++++|+
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~-----~~~~~~av~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 77 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLA-----GNGEVVAVSSRTLESAQAFANKYHLPK---AYDKLEDMLADESIDVIYVATIN 77 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHH-----CSEEEEEEECSCSSTTCC---CCCCSC---EESCHHHHHTCTTCCEEEECSCG
T ss_pred eEEEEEechHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEECCCc
Confidence 6899999999999999999876 034544 34444444445566667631 1578999987 79999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 014863 189 AAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
..+.++....+ +.|+-|.
T Consensus 78 ~~h~~~~~~al---~aGk~Vl 95 (329)
T 3evn_A 78 QDHYKVAKAAL---LAGKHVL 95 (329)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHHH---HCCCeEE
Confidence 99988776543 4565443
No 180
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.00 E-value=1.2e-05 Score=79.61 Aligned_cols=85 Identities=14% Similarity=0.141 Sum_probs=63.6
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCceEE-EEecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeec
Q 014863 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavp 187 (417)
.||||||+|.||. .++.+|++. .+++++ +.++...+..+.+.+.|+.. +.+.+|+++ +.|+|++++|
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~~ll~~~~~D~V~i~tp 98 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAE-----PLTEVTAIASRRWDRAKRFTERFGGEP----VEGYPALLERDDVDAVYVPLP 98 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHC-----TTEEEEEEEESSHHHHHHHHHHHCSEE----EESHHHHHTCTTCSEEEECCC
T ss_pred eEEEEEcCcHHHHHHHHHHHHhC-----CCeEEEEEEcCCHHHHHHHHHHcCCCC----cCCHHHHhcCCCCCEEEECCC
Confidence 6899999999998 799999875 145655 44454445556667778875 578999986 5899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEE
Q 014863 188 DAAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL 208 (417)
+..+.++....+ +.|+-|
T Consensus 99 ~~~h~~~~~~al---~aGk~V 116 (350)
T 3rc1_A 99 AVLHAEWIDRAL---RAGKHV 116 (350)
T ss_dssp GGGHHHHHHHHH---HTTCEE
T ss_pred cHHHHHHHHHHH---HCCCcE
Confidence 999998876644 345543
No 181
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.00 E-value=1.2e-05 Score=78.00 Aligned_cols=98 Identities=18% Similarity=0.160 Sum_probs=62.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHH--HcCceec-CC--CcCCHHhhhccCCeEEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAGFTEE-NG--TLGDIYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~--~~G~~~~-d~--~~~~~~Eav~~ADiViL 184 (417)
+||+|||.|+||.++|..|... |+ +|.+.++...+....+. ..+.... +. ...+..++++++|+||+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~------g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii 81 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR------GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVI 81 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEE
Confidence 8999999999999999999998 88 88776665322211122 2332100 00 01112467889999999
Q ss_pred eecchhH----------------HHHHHHHHhcCCCCcEE-EEeccchh
Q 014863 185 LISDAAQ----------------ADNYEKIFSCMKPNSIL-GLSHGFLL 216 (417)
Q Consensus 185 avpd~a~----------------~~Vl~eI~p~Lk~GaiL-~~a~G~~i 216 (417)
+++.... .++++++.++ .++.+| ++.-|+..
T Consensus 82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDI 129 (319)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHH
Confidence 9953322 2566777775 566654 46667754
No 182
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.99 E-value=2.8e-05 Score=71.36 Aligned_cols=94 Identities=13% Similarity=0.059 Sum_probs=62.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC---HHhh-hccCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET-ISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~Ea-v~~ADiViLavp 187 (417)
|||.|||+|.+|..+++.|.+. |++|++.++..+...+.+...|.....+...+ ..++ ++++|+|+++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~------g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR------KYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT------TCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 5799999999999999999999 99988777654433333444565321111223 2233 788999999999
Q ss_pred chhHHHHHHHHHhcC-CCCcEEEEe
Q 014863 188 DAAQADNYEKIFSCM-KPNSILGLS 211 (417)
Q Consensus 188 d~a~~~Vl~eI~p~L-k~GaiL~~a 211 (417)
+.....++..++..+ ....+++-+
T Consensus 75 ~d~~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 75 RDEVNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEECC
T ss_pred CcHHHHHHHHHHHHHcCCCeEEEEE
Confidence 988766665555543 333455433
No 183
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.97 E-value=2.5e-05 Score=76.37 Aligned_cols=93 Identities=20% Similarity=0.153 Sum_probs=61.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHH-------c--CceecCCCcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------A--GFTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~-------~--G~~~~d~~~~~~~Eav~~ADi 181 (417)
+||+|||.|+||.++|..|... |+ +|++.++..++....+.+ . ..... ...+. +++++||+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~------g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~--~t~d~-~a~~~aDi 75 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD------NLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVI--GTDDY-ADISGSDV 75 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE--EESCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEE--ECCCH-HHhCCCCE
Confidence 7999999999999999999998 88 877776654322221111 0 11110 02455 78999999
Q ss_pred EEEee--------------cch--hHHHHHHHHHhcCCCCcEEE-Eeccc
Q 014863 182 VLLLI--------------SDA--AQADNYEKIFSCMKPNSILG-LSHGF 214 (417)
Q Consensus 182 ViLav--------------pd~--a~~~Vl~eI~p~Lk~GaiL~-~a~G~ 214 (417)
||+++ +.. ...+++++|.++. ++++|+ .+...
T Consensus 76 Vi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~ 124 (317)
T 2ewd_A 76 VIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPL 124 (317)
T ss_dssp EEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSH
T ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChH
Confidence 99999 322 2346777888875 566554 44443
No 184
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.96 E-value=6.6e-06 Score=81.23 Aligned_cols=92 Identities=13% Similarity=0.033 Sum_probs=64.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcC---ceecCCCcCCHHhhhccCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG---FTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G---~~~~d~~~~~~~Eav~~ADiViLavpd 188 (417)
++|+|||+|.||.+++++|+... ...+|.+++|..++..+.+.+.+ +.. . +.+.++++ ++|+|+++||.
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~----~~~~V~v~~r~~~~a~~la~~~~~~~~~~--~-~~~~~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVF----DIGEVKAYDVREKAAKKFVSYCEDRGISA--S-VQPAEEAS-RCDVLVTTTPS 197 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS----CCCEEEEECSSHHHHHHHHHHHHHTTCCE--E-ECCHHHHT-SSSEEEECCCC
T ss_pred CEEEEEcCcHHHHHHHHHHHHhC----CccEEEEECCCHHHHHHHHHHHHhcCceE--E-ECCHHHHh-CCCEEEEeeCC
Confidence 89999999999999999998740 02367777777555555554432 211 1 45788999 99999999996
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccch
Q 014863 189 AAQADNYEKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~~a~G~~ 215 (417)
.. .++. ...+++|++|.+.+.+.
T Consensus 198 ~~--pv~~--~~~l~~G~~V~~ig~~~ 220 (322)
T 1omo_A 198 RK--PVVK--AEWVEEGTHINAIGADG 220 (322)
T ss_dssp SS--CCBC--GGGCCTTCEEEECSCCS
T ss_pred CC--ceec--HHHcCCCeEEEECCCCC
Confidence 43 2221 25688998888775553
No 185
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.95 E-value=3e-05 Score=76.66 Aligned_cols=90 Identities=13% Similarity=0.136 Sum_probs=62.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEE-EecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd 188 (417)
.||||||+|.||..++..|... .+++++. .++..++..+.+.+.|+........+.+++++ +.|+|++++|+
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~-----~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 81 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLA-----PNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPT 81 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCG
T ss_pred eEEEEECchHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCCh
Confidence 6899999999999999999874 1455543 34443344456667774100001568889886 59999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 014863 189 AAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
..+.++.... |+.|+.|.
T Consensus 82 ~~h~~~~~~a---l~aGk~V~ 99 (362)
T 1ydw_A 82 SLHVEWAIKA---AEKGKHIL 99 (362)
T ss_dssp GGHHHHHHHH---HTTTCEEE
T ss_pred HHHHHHHHHH---HHCCCeEE
Confidence 9998877654 45566443
No 186
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.94 E-value=1.1e-05 Score=82.00 Aligned_cols=98 Identities=13% Similarity=0.088 Sum_probs=69.2
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCc-----------------
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL----------------- 169 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~----------------- 169 (417)
.+.| ++|+|||+|.+|...++.++.. |.+|++.+++. ...+.+.+.|.....-..
T Consensus 169 ~l~g-~~V~ViGaG~iG~~aa~~a~~~------Ga~V~v~D~~~-~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~ 240 (401)
T 1x13_A 169 KVPP-AKVMVIGAGVAGLAAIGAANSL------GAIVRAFDTRP-EVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDA 240 (401)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCG-GGHHHHHHTTCEECCC--------CCHHHHHHSHH
T ss_pred CcCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH-HHHHHHHHcCCEEEEecccccccccccchhhccHH
Confidence 4788 9999999999999999999988 98887766653 345566777765310000
Q ss_pred ------CCHHhhhccCCeEEEe--ecchhHHHHH-HHHHhcCCCCcEEEEec
Q 014863 170 ------GDIYETISGSDLVLLL--ISDAAQADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 170 ------~~~~Eav~~ADiViLa--vpd~a~~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
.+.++.++++|+||.+ +|......++ ++....|++|.+|++++
T Consensus 241 ~~~~~~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 241 FIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 0256788899999999 5422222333 45667799999998776
No 187
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.93 E-value=8.1e-06 Score=79.20 Aligned_cols=84 Identities=12% Similarity=0.112 Sum_probs=57.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecch
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd~ 189 (417)
+||||||+|.||..++.+|++. .+++++...+.+....+...+. +.. ..+.+++++ ++|+|++++|+.
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~-----~~~~~v~v~d~~~~~~~~~~~~-~~~----~~~~~~~l~~~~~D~V~i~tp~~ 80 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGL-----PGAALVRLASSNPDNLALVPPG-CVI----ESDWRSVVSAPEVEAVIIATPPA 80 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHC-----TTEEEEEEEESCHHHHTTCCTT-CEE----ESSTHHHHTCTTCCEEEEESCGG
T ss_pred ceEEEECCcHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHhh-Ccc----cCCHHHHhhCCCCCEEEEeCChH
Confidence 6899999999999999999875 0456553333333222221111 322 467888885 799999999999
Q ss_pred hHHHHHHHHHhcCCCCcEE
Q 014863 190 AQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 190 a~~~Vl~eI~p~Lk~GaiL 208 (417)
.+.++..+. ++.|+.|
T Consensus 81 ~h~~~~~~a---l~~Gk~v 96 (315)
T 3c1a_A 81 THAEITLAA---IASGKAV 96 (315)
T ss_dssp GHHHHHHHH---HHTTCEE
T ss_pred HHHHHHHHH---HHCCCcE
Confidence 998887654 3456543
No 188
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.93 E-value=1.5e-05 Score=77.89 Aligned_cols=89 Identities=12% Similarity=0.084 Sum_probs=62.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEE-EecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd 188 (417)
.||||||+|.||..++.+|+.. . +.+++++. +++..++..+.+.+.|+.. ...++++++. +.|+|++++|+
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~-~--~~~~~l~av~d~~~~~a~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp~ 76 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTL-P--RSEHQVVAVAARDLSRAKEFAQKHDIPK---AYGSYEELAKDPNVEVAYVGTQH 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-C--TTTEEEEEEECSSHHHHHHHHHHHTCSC---EESSHHHHHHCTTCCEEEECCCG
T ss_pred cEEEEECchHHHHHHHHHHHhC-C--CCCeEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEECCCc
Confidence 6999999999999999999764 0 00234443 3444344556667777731 1678999987 69999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 014863 189 AAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
..+.++....+ +.|+.|.
T Consensus 77 ~~H~~~~~~al---~~GkhVl 94 (334)
T 3ohs_X 77 PQHKAAVMLCL---AAGKAVL 94 (334)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHHH---hcCCEEE
Confidence 99988776543 4565443
No 189
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.90 E-value=3.5e-05 Score=73.68 Aligned_cols=151 Identities=11% Similarity=0.080 Sum_probs=90.8
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a 190 (417)
|+||+|+|+|.||..+++.+.+. +.+++...+.+.. ...|+.. ..++++++ ++|+||-.+.|..
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~------~~eLva~~d~~~~-----~~~gv~v----~~dl~~l~-~~DVvIDft~p~a 66 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK------GHEIVGVIENTPK-----ATTPYQQ----YQHIADVK-GADVAIDFSNPNL 66 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEECSSCC-------CCSCB----CSCTTTCT-TCSEEEECSCHHH
T ss_pred ceEEEEECcCHHHHHHHHHHHhC------CCEEEEEEecCcc-----ccCCCce----eCCHHHHh-CCCEEEEeCChHH
Confidence 58999999999999999999887 5555443444332 1367664 56778877 9999997777776
Q ss_pred HHHHHHHHHhcCCCCc-EEEEeccchhhhhhccccCCCCCCcEEEeccCCchhhHH--HHHhhcccccC-CCceEEEeec
Q 014863 191 QADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVR--RLYVQGKEING-AGINSSFAVH 266 (417)
Q Consensus 191 ~~~Vl~eI~p~Lk~Ga-iL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr--~ly~~G~e~~G-~Gv~~liav~ 266 (417)
..+.++ ++.|. +|+-..|++-..++. ....-+.+. +...||..--+.- .+-+.--...+ +-+- ++-.|
T Consensus 67 ~~~~~~-----l~~g~~vVigTTG~s~e~~~~-l~~aa~~~~-v~~a~N~S~Gv~l~~~~~~~aa~~l~~~die-I~E~H 138 (243)
T 3qy9_A 67 LFPLLD-----EDFHLPLVVATTGEKEKLLNK-LDELSQNMP-VFFSANMSYGVHALTKILAAAVPLLDDFDIE-LTEAH 138 (243)
T ss_dssp HHHHHT-----SCCCCCEEECCCSSHHHHHHH-HHHHTTTSE-EEECSSCCHHHHHHHHHHHHHHHHTTTSEEE-EEEEE
T ss_pred HHHHHH-----HhcCCceEeCCCCCCHHHHHH-HHHHHhcCC-EEEECCccHHHHHHHHHHHHHHHhcCCCCEE-EEEcC
Confidence 665553 56665 455566886432221 011123444 4789988755410 00000000001 1122 23334
Q ss_pred C----C-CCHHHHHHHHHHHHHhCC
Q 014863 267 Q----D-VDGRATNVALGWSVALGS 286 (417)
Q Consensus 267 q----d-~sgea~e~a~al~~aiG~ 286 (417)
. | +||.|+.+++.+ ...|.
T Consensus 139 H~~K~DaPSGTA~~la~~i-~~~~~ 162 (243)
T 3qy9_A 139 HNKKVDAPSGTLEKLYDVI-VSLKE 162 (243)
T ss_dssp CTTCCSSSCHHHHHHHHHH-HHHST
T ss_pred CCCCCCCCCHHHHHHHHHH-HhcCc
Confidence 3 2 789999999999 88874
No 190
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.90 E-value=1.4e-06 Score=83.50 Aligned_cols=90 Identities=16% Similarity=0.063 Sum_probs=62.0
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEee
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLav 186 (417)
++| +|+|||.|.||.+++.+|.+. |. +|.+.+|+.++..+.+.+.+... ..+..++++++|+||.+|
T Consensus 107 ~~~--~vliiGaGg~a~ai~~~L~~~------G~~~I~v~nR~~~ka~~la~~~~~~~----~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 107 VKE--PVVVVGAGGAARAVIYALLQM------GVKDIWVVNRTIERAKALDFPVKIFS----LDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp CCS--SEEEECCSHHHHHHHHHHHHT------TCCCEEEEESCHHHHHTCCSSCEEEE----GGGHHHHHHTCSEEEECS
T ss_pred CCC--eEEEECcHHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHHcccCC----HHHHHhhhcCCCEEEECC
Confidence 455 899999999999999999998 88 88888887444333333333222 456778899999999999
Q ss_pred cchhHHH--HHHHHHhcCCCCcEEEEe
Q 014863 187 SDAAQAD--NYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 187 pd~a~~~--Vl~eI~p~Lk~GaiL~~a 211 (417)
|.....+ .++ .+.++++++|++.
T Consensus 175 p~gm~p~~~~i~--~~~l~~~~~V~Di 199 (253)
T 3u62_A 175 SVGMKGEELPVS--DDSLKNLSLVYDV 199 (253)
T ss_dssp STTTTSCCCSCC--HHHHTTCSEEEEC
T ss_pred CCCCCCCCCCCC--HHHhCcCCEEEEe
Confidence 8643221 111 1235678877644
No 191
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.90 E-value=6.9e-06 Score=80.18 Aligned_cols=95 Identities=15% Similarity=0.168 Sum_probs=65.9
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCc---eecCCCcCCHHhhhccCCeE
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~---~~~d~~~~~~~Eav~~ADiV 182 (417)
.++| ++|.|||.|.||.+++..|.+. |. +|++.+|+.++..+.+.+.+. ... ...+..+++.++|+|
T Consensus 138 ~l~~-~~vlVlGaGg~g~aia~~L~~~------G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 138 TLDG-KRILVIGAGGGARGIYFSLLST------AAERIDMANRTVEKAERLVREGDERRSAYF--SLAEAETRLAEYDII 208 (297)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECSSHHHHHHHHHHSCSSSCCEE--CHHHHHHTGGGCSEE
T ss_pred CCCC-CEEEEECcHHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHhhhccCcee--eHHHHHhhhccCCEE
Confidence 4678 9999999999999999999998 97 898888876665566666543 110 012456778899999
Q ss_pred EEeecchhHHHH--HHHH-HhcCCCCcEEEEe
Q 014863 183 LLLISDAAQADN--YEKI-FSCMKPNSILGLS 211 (417)
Q Consensus 183 iLavpd~a~~~V--l~eI-~p~Lk~GaiL~~a 211 (417)
|.++|......+ . .+ ...++++.+|+++
T Consensus 209 In~t~~~~~~~~~~~-~i~~~~l~~~~~v~D~ 239 (297)
T 2egg_A 209 INTTSVGMHPRVEVQ-PLSLERLRPGVIVSDI 239 (297)
T ss_dssp EECSCTTCSSCCSCC-SSCCTTCCTTCEEEEC
T ss_pred EECCCCCCCCCCCCC-CCCHHHcCCCCEEEEc
Confidence 999997654210 0 01 1235566666644
No 192
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.90 E-value=2.4e-05 Score=76.62 Aligned_cols=91 Identities=16% Similarity=0.215 Sum_probs=62.8
Q ss_pred ccCCCCEEEEEcccchHHHH-HHHHHhhhhhhcCCceEEE-EecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeE
Q 014863 107 AFNGINQIGVIGWGSQGPAQ-AQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLV 182 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~Ai-A~~Lr~s~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiV 182 (417)
.++.|.||||||+|.||... +..+++. .+.+++. +++..++..+.|.+.|+.. ...|.+|+++ +.|+|
T Consensus 19 ~~~~mirigiIG~G~ig~~~~~~~~~~~-----~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~~~~iDaV 90 (350)
T 4had_A 19 YFQSMLRFGIISTAKIGRDNVVPAIQDA-----ENCVVTAIASRDLTRAREMADRFSVPH---AFGSYEEMLASDVIDAV 90 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHC-----SSEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHHCSSCSEE
T ss_pred cccCccEEEEEcChHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCe---eeCCHHHHhcCCCCCEE
Confidence 45567899999999999864 5666654 1456553 4444445567777888742 1578999885 57999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEE
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~GaiL 208 (417)
+++||+..+.++....+. .|+-|
T Consensus 91 ~I~tP~~~H~~~~~~al~---aGkhV 113 (350)
T 4had_A 91 YIPLPTSQHIEWSIKAAD---AGKHV 113 (350)
T ss_dssp EECSCGGGHHHHHHHHHH---TTCEE
T ss_pred EEeCCCchhHHHHHHHHh---cCCEE
Confidence 999999999988766443 45543
No 193
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.87 E-value=3e-05 Score=78.63 Aligned_cols=75 Identities=23% Similarity=0.322 Sum_probs=59.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
.+.| ++|+|||+|.||..+++.|+.. |. +|++.+|...+..+.+.+.|.... ...+..+.+.++|+||.+
T Consensus 164 ~l~g-~~VlIiGaG~iG~~~a~~l~~~------G~~~V~v~~r~~~ra~~la~~~g~~~~--~~~~l~~~l~~aDvVi~a 234 (404)
T 1gpj_A 164 SLHD-KTVLVVGAGEMGKTVAKSLVDR------GVRAVLVANRTYERAVELARDLGGEAV--RFDELVDHLARSDVVVSA 234 (404)
T ss_dssp CCTT-CEEEEESCCHHHHHHHHHHHHH------CCSEEEEECSSHHHHHHHHHHHTCEEC--CGGGHHHHHHTCSEEEEC
T ss_pred cccC-CEEEEEChHHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHcCCcee--cHHhHHHHhcCCCEEEEc
Confidence 3688 9999999999999999999998 98 888887765544466777776421 124667888999999999
Q ss_pred ecchh
Q 014863 186 ISDAA 190 (417)
Q Consensus 186 vpd~a 190 (417)
+|...
T Consensus 235 t~~~~ 239 (404)
T 1gpj_A 235 TAAPH 239 (404)
T ss_dssp CSSSS
T ss_pred cCCCC
Confidence 98554
No 194
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.86 E-value=3.6e-05 Score=75.17 Aligned_cols=93 Identities=20% Similarity=0.201 Sum_probs=58.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHHc--Cc------eecCCCcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA--GF------TEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~~--G~------~~~d~~~~~~~Eav~~ADi 181 (417)
+||+|||.|++|.++|..|... |+ +|++.++...+....+.+. +. .. ...+ .+++++||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~------g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i---~~~~-~~a~~~aDv 70 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR------GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRV---WHGG-HSELADAQV 70 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEE---EEEC-GGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEE---EECC-HHHhCCCCE
Confidence 5899999999999999999988 87 7777665533222223321 11 11 0123 467999999
Q ss_pred EEEeecchhH----------------HHHHHHHHhcCCCCcEEE-Eeccch
Q 014863 182 VLLLISDAAQ----------------ADNYEKIFSCMKPNSILG-LSHGFL 215 (417)
Q Consensus 182 ViLavpd~a~----------------~~Vl~eI~p~Lk~GaiL~-~a~G~~ 215 (417)
||++++.... .++++++.++ .|+.+|+ .+-+..
T Consensus 71 VIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 71 VILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPVD 120 (304)
T ss_dssp EEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSHH
T ss_pred EEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCchH
Confidence 9999964322 4555667776 4676654 344444
No 195
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.85 E-value=2.7e-05 Score=78.45 Aligned_cols=98 Identities=13% Similarity=0.103 Sum_probs=69.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcC---------------C
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG---------------D 171 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~---------------~ 171 (417)
.+.| ++|+|||+|.+|...++.++.. |.+|++.+++.. ..+.+.+.|.....-... +
T Consensus 169 ~l~g-~~V~ViGaG~iG~~aa~~a~~~------Ga~V~~~d~~~~-~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s 240 (384)
T 1l7d_A 169 TVPP-ARVLVFGVGVAGLQAIATAKRL------GAVVMATDVRAA-TKEQVESLGGKFITVDDEAMKTAETAGGYAKEMG 240 (384)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCST-THHHHHHTTCEECCC-------------------
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHcCCeEEeecccccccccccccchhhcC
Confidence 5788 9999999999999999999988 988777666543 455666677643100000 0
Q ss_pred ----------HHhhhccCCeEEEee--cchhHHHHH-HHHHhcCCCCcEEEEec
Q 014863 172 ----------IYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (417)
Q Consensus 172 ----------~~Eav~~ADiViLav--pd~a~~~Vl-~eI~p~Lk~GaiL~~a~ 212 (417)
..+.++++|+||.++ |......++ ++....|++|.+|++.+
T Consensus 241 ~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 241 EEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp ----CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 567788999999988 422222233 55667799999988776
No 196
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.82 E-value=3e-06 Score=82.50 Aligned_cols=94 Identities=13% Similarity=0.117 Sum_probs=61.4
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
.++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+. ++... ...+..++++++|+||.+
T Consensus 114 ~l~~-k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~~a~~la~--~~~~~--~~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 114 GIED-AYILILGAGGASKGIANELYKI------VRPTLTVANRTMSRFNNWSL--NINKI--NLSHAESHLDEFDIIINT 182 (277)
T ss_dssp TGGG-CCEEEECCSHHHHHHHHHHHTT------CCSCCEEECSCGGGGTTCCS--CCEEE--CHHHHHHTGGGCSEEEEC
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHH--hcccc--cHhhHHHHhcCCCEEEEC
Confidence 4678 9999999999999999999998 98 88888887554433332 22210 133556778899999999
Q ss_pred ecchhHHHHHHHH-HhcCCCCcEEEEe
Q 014863 186 ISDAAQADNYEKI-FSCMKPNSILGLS 211 (417)
Q Consensus 186 vpd~a~~~Vl~eI-~p~Lk~GaiL~~a 211 (417)
||......+-..+ ...++++.+|+|.
T Consensus 183 Tp~Gm~~~~~~~l~~~~l~~~~~V~D~ 209 (277)
T 3don_A 183 TPAGMNGNTDSVISLNRLASHTLVSDI 209 (277)
T ss_dssp CC-------CCSSCCTTCCSSCEEEES
T ss_pred ccCCCCCCCcCCCCHHHcCCCCEEEEe
Confidence 9976443321001 2346777777754
No 197
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.81 E-value=5.2e-05 Score=73.97 Aligned_cols=86 Identities=17% Similarity=0.190 Sum_probs=56.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchhH
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a~ 191 (417)
.||||||+|+||..++..|++. .+++++...+.+.... ++.|+.. ....++.+. .++|+|++|+|+..+
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~-----~~~elvav~d~~~~~~---~~~g~~~--~~~~~l~~~-~~~DvViiatp~~~h 78 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREA-----PDFEIAGIVRRNPAEV---PFELQPF--RVVSDIEQL-ESVDVALVCSPSREV 78 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECC----------CCTTS--CEESSGGGS-SSCCEEEECSCHHHH
T ss_pred CEEEEECChHHHHHHHHHHhcC-----CCCEEEEEEcCCHHHH---HHcCCCc--CCHHHHHhC-CCCCEEEECCCchhh
Confidence 5899999999999999999874 1567653344433322 2256431 113344444 789999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEe
Q 014863 192 ADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 192 ~~Vl~eI~p~Lk~GaiL~~a 211 (417)
.++.... ++.|+.|++.
T Consensus 79 ~~~~~~a---l~aG~~Vi~e 95 (304)
T 3bio_A 79 ERTALEI---LKKGICTADS 95 (304)
T ss_dssp HHHHHHH---HTTTCEEEEC
T ss_pred HHHHHHH---HHcCCeEEEC
Confidence 8877654 4457766554
No 198
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.79 E-value=3.7e-05 Score=75.47 Aligned_cols=98 Identities=17% Similarity=0.137 Sum_probs=61.9
Q ss_pred cccCCCC--EEEEEcccchHHHHHHHHHhhhhh--hcCCceEEE-EecCCchhHHHHHHcCceecCCCcCCHHhhhc--c
Q 014863 106 DAFNGIN--QIGVIGWGSQGPAQAQNLRDSLAE--AKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--G 178 (417)
Q Consensus 106 ~~l~g~k--kIgIIG~G~mG~AiA~~Lr~s~~~--~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ 178 (417)
-++..|| ||||||+|.||..++.+++....- .-.+.+++. .++..++..+.+.+.|+.. ...|.+|+++ +
T Consensus 18 ~~~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~~~~ 94 (393)
T 4fb5_A 18 LYFQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEK---ATADWRALIADPE 94 (393)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSE---EESCHHHHHHCTT
T ss_pred ccccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCe---ecCCHHHHhcCCC
Confidence 4666665 799999999999998887653000 001345543 4444455667778888742 1578999885 5
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 014863 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 179 ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
.|+|+++||+..+.++....+. .|+-|.
T Consensus 95 iDaV~IatP~~~H~~~a~~al~---aGkhVl 122 (393)
T 4fb5_A 95 VDVVSVTTPNQFHAEMAIAALE---AGKHVW 122 (393)
T ss_dssp CCEEEECSCGGGHHHHHHHHHH---TTCEEE
T ss_pred CcEEEECCChHHHHHHHHHHHh---cCCeEE
Confidence 7999999999999988765443 455443
No 199
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.78 E-value=0.0001 Score=71.89 Aligned_cols=84 Identities=12% Similarity=0.043 Sum_probs=61.5
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCceEE-EEecCCchhHHHHHHcC-ceecCCCcCCHHhhhc--cCCeEEEee
Q 014863 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAG-FTEENGTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G-~~~~d~~~~~~~Eav~--~ADiViLav 186 (417)
.||||||+|.+|. .++.+|+.. +.+++ +.++..++..+.+.+.| ... ..+.+++++ +.|+|++++
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~------~~~lvav~d~~~~~~~~~a~~~~~~~~----~~~~~~ll~~~~~D~V~i~t 74 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDA------GAELAGVFESDSDNRAKFTSLFPSVPF----AASAEQLITDASIDLIACAV 74 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHT------TCEEEEEECSCTTSCHHHHHHSTTCCB----CSCHHHHHTCTTCCEEEECS
T ss_pred cEEEEECCChHHHHHhhhhhcCC------CcEEEEEeCCCHHHHHHHHHhcCCCcc----cCCHHHHhhCCCCCEEEEeC
Confidence 6899999999996 678888765 77754 44555455556677764 332 678999886 689999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEE
Q 014863 187 SDAAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL 208 (417)
|+..+.++.... |+.|+.|
T Consensus 75 p~~~h~~~~~~a---l~aGkhV 93 (336)
T 2p2s_A 75 IPCDRAELALRT---LDAGKDF 93 (336)
T ss_dssp CGGGHHHHHHHH---HHTTCEE
T ss_pred ChhhHHHHHHHH---HHCCCcE
Confidence 999998877654 3456643
No 200
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.78 E-value=2e-05 Score=77.52 Aligned_cols=85 Identities=9% Similarity=0.171 Sum_probs=57.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchhH
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a~ 191 (417)
.||+|||+|+||..++++|.+. .+++++...+.+... +.+ .|+.. ..++++++.++|+|++++|+..+
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~-----~~~elvav~d~~~~~-~~~--~gv~~----~~d~~~ll~~~DvViiatp~~~h 71 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQ-----PDMDLVGIFSRRATL-DTK--TPVFD----VADVDKHADDVDVLFLCMGSATD 71 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEEESSSCC-SSS--SCEEE----GGGGGGTTTTCSEEEECSCTTTH
T ss_pred CEEEEEeecHHHHHHHHHHhcC-----CCCEEEEEEcCCHHH-hhc--CCCce----eCCHHHHhcCCCEEEEcCCcHHH
Confidence 5899999999999999999775 135554333332222 222 46543 45677777889999999999987
Q ss_pred HHHHHHHHhcCCCCcEEEEe
Q 014863 192 ADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 192 ~~Vl~eI~p~Lk~GaiL~~a 211 (417)
.+.+. ..++.|..|++.
T Consensus 72 ~~~~~---~al~aG~~Vv~e 88 (320)
T 1f06_A 72 IPEQA---PKFAQFACTVDT 88 (320)
T ss_dssp HHHHH---HHHTTTSEEECC
T ss_pred HHHHH---HHHHCCCEEEEC
Confidence 65544 344567765543
No 201
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.76 E-value=1.5e-05 Score=80.08 Aligned_cols=92 Identities=15% Similarity=0.107 Sum_probs=63.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCC-CcCCHHhhhccCCeEEEeecchh
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG-TLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~-~~~~~~Eav~~ADiViLavpd~a 190 (417)
++|+|||+|.||.+++..|.+. .+|.+++|+.++..+.+...+....|- ...+++++++++|+||.|+|+..
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-------~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~ 89 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFL 89 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-------CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhh
Confidence 7999999999999999999764 478888887544333333222111010 01245678899999999999987
Q ss_pred HHHHHHHHHhcCCCCcEEEEecc
Q 014863 191 QADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 191 ~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
+..+... .++.|+.+++...
T Consensus 90 ~~~v~~a---~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 90 GFKSIKA---AIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHHH---HHHTTCCEEECCC
T ss_pred hHHHHHH---HHHhCCeEEEccC
Confidence 7776543 3456777776654
No 202
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.74 E-value=5.3e-05 Score=76.09 Aligned_cols=88 Identities=11% Similarity=0.033 Sum_probs=64.3
Q ss_pred CEEEEEcccc---hHHHHHHHHHhhhhhhcCC-ceEEE--EecCCchhHHHHHHcCceecCCCcCCHHhhhcc-------
Q 014863 112 NQIGVIGWGS---QGPAQAQNLRDSLAEAKSD-IVVKV--GLRKGSRSFAEARAAGFTEENGTLGDIYETISG------- 178 (417)
Q Consensus 112 kkIgIIG~G~---mG~AiA~~Lr~s~~~~~~G-~~Viv--g~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~------- 178 (417)
.||||||+|. ||..++.+++.. + ++++. .++..++..+.+.+.|+.. .....+.+|++++
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~------~~~~lva~v~d~~~~~a~~~a~~~g~~~-~~~~~~~~~ll~~~~~~~~~ 85 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRD------NTFVLVAGAFDIDPIRGSAFGEQLGVDS-ERCYADYLSMFEQEARRADG 85 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGG------GSEEEEEEECCSSHHHHHHHHHHTTCCG-GGBCSSHHHHHHHHTTCTTC
T ss_pred ceEEEEcCCccchhHHHHHHHHhhC------CCeEEEEEEeCCCHHHHHHHHHHhCCCc-ceeeCCHHHHHhcccccCCC
Confidence 5899999999 999999998876 4 56653 3444445556677788831 1126789999865
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 014863 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 179 ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
.|+|++++|+..+.++....+. .|+-|.
T Consensus 86 vD~V~i~tp~~~H~~~~~~al~---aGkhVl 113 (398)
T 3dty_A 86 IQAVSIATPNGTHYSITKAALE---AGLHVV 113 (398)
T ss_dssp CSEEEEESCGGGHHHHHHHHHH---TTCEEE
T ss_pred CCEEEECCCcHHHHHHHHHHHH---CCCeEE
Confidence 9999999999999888765443 455443
No 203
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.74 E-value=0.00014 Score=71.06 Aligned_cols=70 Identities=19% Similarity=0.110 Sum_probs=46.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHH--HcC-------ceecCCCcCCHHhhhccCCeE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR--AAG-------FTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~--~~G-------~~~~d~~~~~~~Eav~~ADiV 182 (417)
|||+|||.|.||.++|..|... +.|.+|++.++...+....+. ..+ ... ....+.++ +++||+|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i--~~t~d~~~-l~~aDvV 73 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEK----QLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKV--TGSNDYAD-TANSDIV 73 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEE--EEESCGGG-GTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEE--EECCCHHH-HCCCCEE
Confidence 5899999999999999999875 125688777665433222221 111 111 01245655 8999999
Q ss_pred EEeecc
Q 014863 183 LLLISD 188 (417)
Q Consensus 183 iLavpd 188 (417)
|+++|.
T Consensus 74 iiav~~ 79 (310)
T 1guz_A 74 IITAGL 79 (310)
T ss_dssp EECCSC
T ss_pred EEeCCC
Confidence 999964
No 204
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.74 E-value=4e-05 Score=76.72 Aligned_cols=86 Identities=12% Similarity=0.127 Sum_probs=63.4
Q ss_pred CEEEEEccc-chHHHHHHHHHhhhhhhcCCceEEEEecCC-chhHHHHHHcCceecCCCcCCHHhhhcc--CCeEEEeec
Q 014863 112 NQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G-~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-~~s~~~A~~~G~~~~d~~~~~~~Eav~~--ADiViLavp 187 (417)
.||||||+| .||..++.+|+.. .+++++...+.+ .+..+.+.+.|+.. +.+++|++++ .|+|++++|
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~ell~~~~vD~V~i~tp 73 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHH-----PDAQIVAACDPNEDVRERFGKEYGIPV----FATLAEMMQHVQMDAVYIASP 73 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHC-----TTEEEEEEECSCHHHHHHHHHHHTCCE----ESSHHHHHHHSCCSEEEECSC
T ss_pred eEEEEEeCCHHHHHHHHHHHHhC-----CCeEEEEEEeCCHHHHHHHHHHcCCCe----ECCHHHHHcCCCCCEEEEcCC
Confidence 689999999 9999999999875 145665444443 34445666778764 6789999874 999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 014863 188 DAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+..+.++....+. .|+.|.
T Consensus 74 ~~~H~~~~~~al~---aGk~Vl 92 (387)
T 3moi_A 74 HQFHCEHVVQASE---QGLHII 92 (387)
T ss_dssp GGGHHHHHHHHHH---TTCEEE
T ss_pred cHHHHHHHHHHHH---CCCcee
Confidence 9999887765443 455443
No 205
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.73 E-value=5e-05 Score=75.99 Aligned_cols=99 Identities=13% Similarity=0.077 Sum_probs=67.9
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-cCceec-C-CCcCCHHhhhccCCeE
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEE-N-GTLGDIYETISGSDLV 182 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-~G~~~~-d-~~~~~~~Eav~~ADiV 182 (417)
..+++ ++|+|||.|.+|.++++.++.. |.+|++.+++.. ..+.+.+ .|.... + ....+.+++++++|+|
T Consensus 162 ~~l~~-~~V~ViGaG~iG~~~a~~l~~~------Ga~V~~~d~~~~-~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 162 PGVAP-ASVVILGGGTVGTNAAKIALGM------GAQVTILDVNHK-RLQYLDDVFGGRVITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp TBBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHH-HHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHhcCceEEEecCCHHHHHHHHhCCCEE
Confidence 46888 9999999999999999999998 998887776533 3444433 443210 0 0012456788899999
Q ss_pred EEeecchh--HHH-HHHHHHhcCCCCcEEEEec
Q 014863 183 LLLISDAA--QAD-NYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 183 iLavpd~a--~~~-Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|.+++... ... +.++..+.|++|.+|++.+
T Consensus 234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred EECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 99998543 222 2356778899999887665
No 206
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.72 E-value=0.00016 Score=71.45 Aligned_cols=88 Identities=19% Similarity=0.146 Sum_probs=57.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHH-------c--C--ceecCCCcCCHHhhhccC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------A--G--FTEENGTLGDIYETISGS 179 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~-------~--G--~~~~d~~~~~~~Eav~~A 179 (417)
+||+|||.|.||.++|..|... |+ +|++.++...+....+.. . . +.. ..+. +++++|
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~------g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~----t~d~-~al~~a 83 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK------DLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG----ENNY-EYLQNS 83 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE----ESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE----CCCH-HHHCCC
Confidence 6999999999999999999998 88 876666553322211111 0 1 111 2466 789999
Q ss_pred CeEEEee--cc--------------hhHHHHHHHHHhcCCCCcEEEEe
Q 014863 180 DLVLLLI--SD--------------AAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 180 DiViLav--pd--------------~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
|+||+++ |. ....+++++|.++. |+.+|+++
T Consensus 84 D~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~ 130 (328)
T 2hjr_A 84 DVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI 130 (328)
T ss_dssp SEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred CEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 9999998 42 11335566666665 66665433
No 207
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.71 E-value=6.9e-05 Score=78.40 Aligned_cols=92 Identities=20% Similarity=0.210 Sum_probs=71.5
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEee
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLav 186 (417)
.|.| ++++|+|+|.+|.++|+.|+.. |.+|++.++. ......+...|+. +.+.+++++.+|+|+.++
T Consensus 262 ~L~G-KtVvVtGaGgIG~aiA~~Laa~------GA~Viv~D~~-~~~a~~Aa~~g~d-----v~~lee~~~~aDvVi~at 328 (488)
T 3ond_A 262 MIAG-KVAVVAGYGDVGKGCAAALKQA------GARVIVTEID-PICALQATMEGLQ-----VLTLEDVVSEADIFVTTT 328 (488)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCGGGTTTTCSEEEECS
T ss_pred cccC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCC-HHHHHHHHHhCCc-----cCCHHHHHHhcCEEEeCC
Confidence 4789 9999999999999999999999 9998776554 4345566677876 467889999999999887
Q ss_pred cchhHHHHH-HHHHhcCCCCcEEEEeccc
Q 014863 187 SDAAQADNY-EKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 187 pd~a~~~Vl-~eI~p~Lk~GaiL~~a~G~ 214 (417)
.... ++ .+....|+++.+|+.++.+
T Consensus 329 G~~~---vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 329 GNKD---IIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp SCSC---SBCHHHHTTSCTTEEEEESSST
T ss_pred CChh---hhhHHHHHhcCCCeEEEEcCCC
Confidence 5332 23 2466789999988866543
No 208
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.68 E-value=0.00019 Score=71.10 Aligned_cols=93 Identities=12% Similarity=0.058 Sum_probs=59.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHH-------cCceecCCCcCCHHhhhccCCeEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------AGFTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~-------~G~~~~d~~~~~~~Eav~~ADiVi 183 (417)
+||+|||.|.+|.++|..|... |+ +|++.++..++....+.. .+....-....++++++++||+||
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~------g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi 83 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR------ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVI 83 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEE
Confidence 6999999999999999999998 87 876666554322211111 111100001257888999999999
Q ss_pred Eee--cch--h-----------------HHHHHHHHHhcCCCCcEEEEe
Q 014863 184 LLI--SDA--A-----------------QADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 184 Lav--pd~--a-----------------~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+++ |.. . ..++.++|..+. |+.+|+.+
T Consensus 84 ~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~ 131 (331)
T 1pzg_A 84 VTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVV 131 (331)
T ss_dssp ECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEE
Confidence 998 521 1 335556666665 66665544
No 209
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.68 E-value=0.00029 Score=60.97 Aligned_cols=96 Identities=13% Similarity=0.003 Sum_probs=61.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhH---HHHHHcCceecCCCcCC---HHhh-hccCCeEEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEARAAGFTEENGTLGD---IYET-ISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~---~~A~~~G~~~~d~~~~~---~~Ea-v~~ADiViL 184 (417)
++|.|+|+|.+|..+++.|.+. |++|++..+...+.. ......|+....+...+ ..++ ++++|+|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~------g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR------GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 6899999999999999999998 998887776532222 22223354321111222 2334 789999999
Q ss_pred eecchhHHHHHHHHHhcC-CCCcEEEEecc
Q 014863 185 LISDAAQADNYEKIFSCM-KPNSILGLSHG 213 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~L-k~GaiL~~a~G 213 (417)
++++......+......+ ....++..+.+
T Consensus 78 ~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 78 LSDNDADNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp CSSCHHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred ecCChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 999886655554444444 33345554444
No 210
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.66 E-value=6.8e-05 Score=76.58 Aligned_cols=89 Identities=10% Similarity=0.126 Sum_probs=60.9
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCceEEE-EecCCchhHHHHHHcCceecC-CCcCCHHhhhc--cCCeEEEee
Q 014863 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEEN-GTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~Viv-g~r~~~~s~~~A~~~G~~~~d-~~~~~~~Eav~--~ADiViLav 186 (417)
.||||||+|.||. .++.+|+.. .+++++. .++...+..+.+.+.|+...+ ....+.+++++ +.|+|++++
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iat 158 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGC-----QHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIIL 158 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTC-----SSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECS
T ss_pred eEEEEECCcHHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcC
Confidence 6899999999997 899998764 0456543 344333444556667763100 01568888886 799999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEE
Q 014863 187 SDAAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL 208 (417)
|+..+.++....+ +.|+.|
T Consensus 159 p~~~h~~~~~~al---~aGk~V 177 (433)
T 1h6d_A 159 PNSLHAEFAIRAF---KAGKHV 177 (433)
T ss_dssp CGGGHHHHHHHHH---HTTCEE
T ss_pred CchhHHHHHHHHH---HCCCcE
Confidence 9999988776543 456543
No 211
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.66 E-value=1.5e-05 Score=77.55 Aligned_cols=75 Identities=16% Similarity=0.131 Sum_probs=56.6
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCc---eecCCCcCCHHhhhccCCeE
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~---~~~d~~~~~~~Eav~~ADiV 182 (417)
.++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+.+.+- .. ..+.+++..++|+|
T Consensus 123 ~l~~-k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~~a~~la~~~~~~~~~~----~~~~~~l~~~aDiI 191 (281)
T 3o8q_A 123 LLKG-ATILLIGAGGAARGVLKPLLDQ------QPASITVTNRTFAKAEQLAELVAAYGEVK----AQAFEQLKQSYDVI 191 (281)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHTT------CCSEEEEEESSHHHHHHHHHHHGGGSCEE----EEEGGGCCSCEEEE
T ss_pred CccC-CEEEEECchHHHHHHHHHHHhc------CCCeEEEEECCHHHHHHHHHHhhccCCee----EeeHHHhcCCCCEE
Confidence 4678 9999999999999999999998 96 888889876665555555431 11 23455655889999
Q ss_pred EEeecchhHH
Q 014863 183 LLLISDAAQA 192 (417)
Q Consensus 183 iLavpd~a~~ 192 (417)
|.+||.....
T Consensus 192 InaTp~gm~~ 201 (281)
T 3o8q_A 192 INSTSASLDG 201 (281)
T ss_dssp EECSCCCC--
T ss_pred EEcCcCCCCC
Confidence 9999987653
No 212
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.66 E-value=9.4e-05 Score=72.22 Aligned_cols=86 Identities=8% Similarity=0.046 Sum_probs=60.5
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc-CceecCCCcCCHHhhh----------cc
Q 014863 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETI----------SG 178 (417)
Q Consensus 111 ~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~d~~~~~~~Eav----------~~ 178 (417)
|.||||||+ |.+|..++.+|++. +.+++...+.+......+... +... ..+.++.+ ++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~l~~~~~~ 72 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV------GGVLVASLDPATNVGLVDSFFPEAEF----FTEPEAFEAYLEDLRDRGEG 72 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT------TCEEEEEECSSCCCGGGGGTCTTCEE----ESCHHHHHHHHHHHHHTTCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhC------CCEEEEEEcCCHHHHHHHhhCCCCce----eCCHHHHHHHhhhhcccCCC
Confidence 689999999 78999999999987 776655554433322222222 2232 56788876 67
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 014863 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 179 ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
.|+|++++|+..+.++....+ +.|+-|.
T Consensus 73 vD~V~I~tP~~~H~~~~~~al---~aGkhVl 100 (312)
T 3o9z_A 73 VDYLSIASPNHLHYPQIRMAL---RLGANAL 100 (312)
T ss_dssp CSEEEECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred CcEEEECCCchhhHHHHHHHH---HCCCeEE
Confidence 999999999999988876654 3466444
No 213
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.65 E-value=7.5e-05 Score=73.18 Aligned_cols=90 Identities=20% Similarity=0.186 Sum_probs=61.5
Q ss_pred EEEEEcccchHHHHHHHHHhhhhhh---cCCceEEE-EecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEee
Q 014863 113 QIGVIGWGSQGPAQAQNLRDSLAEA---KSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 113 kIgIIG~G~mG~AiA~~Lr~s~~~~---~~G~~Viv-g~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLav 186 (417)
+|||||+|.||..++.+++.. +.. ..+.+++. .++..++..+.+.+.|+.. ...|.+|+++ +.|+|+++|
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~---~~~d~~~ll~~~~iDaV~I~t 83 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSA-PRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWST---TETDWRTLLERDDVQLVDVCT 83 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHH-HHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESCHHHHTTCTTCSEEEECS
T ss_pred cEEEEcCCHHHHHHHHHHHhC-ccccccccCceEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeC
Confidence 689999999999999998764 100 00124443 3444345556677778742 1578999885 579999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEE
Q 014863 187 SDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
|+..|.++....+ +.|+.|.
T Consensus 84 P~~~H~~~~~~al---~aGkhVl 103 (390)
T 4h3v_A 84 PGDSHAEIAIAAL---EAGKHVL 103 (390)
T ss_dssp CGGGHHHHHHHHH---HTTCEEE
T ss_pred ChHHHHHHHHHHH---HcCCCce
Confidence 9999998776543 3566443
No 214
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.63 E-value=0.00011 Score=72.02 Aligned_cols=86 Identities=8% Similarity=0.026 Sum_probs=60.2
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc-CceecCCCcCCHHhhh-----------c
Q 014863 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETI-----------S 177 (417)
Q Consensus 111 ~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~d~~~~~~~Eav-----------~ 177 (417)
|.||||||+ |.||..++.+|++. +.+++...+.+......+... +... ..+.++.+ +
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~l~~~~~~ 72 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT------GNCLVSAYDINDSVGIIDSISPQSEF----FTEFEFFLDHASNLKRDSAT 72 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT------TCEEEEEECSSCCCGGGGGTCTTCEE----ESSHHHHHHHHHHHTTSTTT
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC------CCEEEEEEcCCHHHHHHHhhCCCCcE----ECCHHHHHHhhhhhhhccCC
Confidence 589999999 79999999999987 776655554433322222222 2332 56788776 5
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 014863 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 178 ~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+.|+|++++|+..+.++....+. .|+-|.
T Consensus 73 ~vD~V~I~tP~~~H~~~~~~al~---aGkhVl 101 (318)
T 3oa2_A 73 ALDYVSICSPNYLHYPHIAAGLR---LGCDVI 101 (318)
T ss_dssp SCCEEEECSCGGGHHHHHHHHHH---TTCEEE
T ss_pred CCcEEEECCCcHHHHHHHHHHHH---CCCeEE
Confidence 79999999999999888766543 455443
No 215
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.62 E-value=8.8e-05 Score=75.20 Aligned_cols=88 Identities=16% Similarity=0.177 Sum_probs=63.1
Q ss_pred CEEEEEcccc---hHHHHHHHHHhhhhhhcCC-ceEEE--EecCCchhHHHHHHcCceecCCCcCCHHhhhcc-------
Q 014863 112 NQIGVIGWGS---QGPAQAQNLRDSLAEAKSD-IVVKV--GLRKGSRSFAEARAAGFTEENGTLGDIYETISG------- 178 (417)
Q Consensus 112 kkIgIIG~G~---mG~AiA~~Lr~s~~~~~~G-~~Viv--g~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~------- 178 (417)
.||||||+|. ||..++..++.. + ++++. .++..++..+.+.+.|+.. .....+.+|++++
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~------~~~~lva~v~d~~~~~a~~~a~~~g~~~-~~~~~~~~~ll~~~~~~~~~ 110 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLD------DHYELVAGALSSTPEKAEASGRELGLDP-SRVYSDFKEMAIREAKLKNG 110 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHT------SCEEEEEEECCSSHHHHHHHHHHHTCCG-GGBCSCHHHHHHHHHHCTTC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhC------CCcEEEEEEeCCCHHHHHHHHHHcCCCc-ccccCCHHHHHhcccccCCC
Confidence 5899999999 999999998876 4 56553 3444445556677788741 1126789998876
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 014863 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 179 ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
.|+|++++|+..+.++.... |+.|+.|.
T Consensus 111 vD~V~I~tp~~~H~~~~~~a---l~aGkhVl 138 (417)
T 3v5n_A 111 IEAVAIVTPNHVHYAAAKEF---LKRGIHVI 138 (417)
T ss_dssp CSEEEECSCTTSHHHHHHHH---HTTTCEEE
T ss_pred CcEEEECCCcHHHHHHHHHH---HhCCCeEE
Confidence 99999999999998877654 34566543
No 216
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.61 E-value=0.00015 Score=71.27 Aligned_cols=70 Identities=20% Similarity=0.186 Sum_probs=44.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHHcCceecCCC-------cCCHHhhhccCCeE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGT-------LGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~~G~~~~d~~-------~~~~~Eav~~ADiV 182 (417)
+||+|||.|+||.+++..|+.. |+ +|++.+.. .. ..++...++...... ..+..+++++||+|
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~------~~~~ev~l~Di~-~~-~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvV 78 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ------GIADEIVLIDAN-ES-KAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLV 78 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSS-HH-HHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCC-cc-hHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEE
Confidence 7999999999999999999887 65 56555544 32 222221111100000 12345789999999
Q ss_pred EEeecch
Q 014863 183 LLLISDA 189 (417)
Q Consensus 183 iLavpd~ 189 (417)
|++++..
T Consensus 79 iia~~~~ 85 (316)
T 1ldn_A 79 VICAGAN 85 (316)
T ss_dssp EECCSCC
T ss_pred EEcCCCC
Confidence 9997644
No 217
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.60 E-value=9.1e-05 Score=74.74 Aligned_cols=69 Identities=14% Similarity=0.095 Sum_probs=52.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc-cCCeEEEe
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLL 185 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~-~ADiViLa 185 (417)
.|+| ++|+|+|+|+||..+|+.|.+. |.+|++.++...+..+.+.+.|... .+.+++.. +||+++.|
T Consensus 170 ~L~G-ktV~V~G~G~VG~~~A~~L~~~------GakVvv~D~~~~~l~~~a~~~ga~~-----v~~~~ll~~~~DIvip~ 237 (364)
T 1leh_A 170 SLEG-LAVSVQGLGNVAKALCKKLNTE------GAKLVVTDVNKAAVSAAVAEEGADA-----VAPNAIYGVTCDIFAPC 237 (364)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHCCEE-----CCGGGTTTCCCSEEEEC
T ss_pred CCCc-CEEEEECchHHHHHHHHHHHHC------CCEEEEEcCCHHHHHHHHHHcCCEE-----EChHHHhccCCcEeecc
Confidence 6899 9999999999999999999999 9998876655333344555556552 34555554 89999977
Q ss_pred ec
Q 014863 186 IS 187 (417)
Q Consensus 186 vp 187 (417)
..
T Consensus 238 a~ 239 (364)
T 1leh_A 238 AL 239 (364)
T ss_dssp SC
T ss_pred ch
Confidence 53
No 218
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.57 E-value=0.00012 Score=73.61 Aligned_cols=92 Identities=17% Similarity=0.127 Sum_probs=62.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhh---hhcCCceEEEE-ecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLA---EAKSDIVVKVG-LRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~---~~~~G~~Vivg-~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLa 185 (417)
.||||||+|.||..++.++++.-. ....+.+++.. ++..++..+.+.+.|+.. ...|.+|+++ +.|+|+++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~---~y~d~~~ll~~~~vD~V~I~ 103 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEK---AYGDWRELVNDPQVDVVDIT 103 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHHCTTCCEEEEC
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCe---EECCHHHHhcCCCCCEEEEC
Confidence 379999999999999999987500 00002355433 344345556677778742 2578999885 68999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEE
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
||+..+.++....+ +.|+-|.
T Consensus 104 tp~~~H~~~~~~al---~aGkhVl 124 (412)
T 4gqa_A 104 SPNHLHYTMAMAAI---AAGKHVY 124 (412)
T ss_dssp SCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCcHHHHHHHHHHH---HcCCCeE
Confidence 99999998776543 3455443
No 219
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.57 E-value=0.00019 Score=71.12 Aligned_cols=94 Identities=16% Similarity=0.169 Sum_probs=62.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCC-chhHHHHHHcCceecC--------------CCcCCHHhhh
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEEN--------------GTLGDIYETI 176 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-~~s~~~A~~~G~~~~d--------------~~~~~~~Eav 176 (417)
.||||||+|.||..+++.|... .+++++...+.+ ......+..+|+..-. ....+.++++
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~-----~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~ 77 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQ-----DDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL 77 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcC-----CCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhc
Confidence 5899999999999999999875 135554444332 3333455566642100 0134778888
Q ss_pred ccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 177 ~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
.+.|+|++|+|...+.+..... ++.|+.|++.++
T Consensus 78 ~~vDvV~~aTp~~~h~~~a~~~---l~aGk~Vi~sap 111 (334)
T 2czc_A 78 EKVDIIVDATPGGIGAKNKPLY---EKAGVKAIFQGG 111 (334)
T ss_dssp TTCSEEEECCSTTHHHHHHHHH---HHHTCEEEECTT
T ss_pred cCCCEEEECCCccccHHHHHHH---HHcCCceEeecc
Confidence 8999999999999887766543 445666655543
No 220
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.56 E-value=7.7e-05 Score=72.94 Aligned_cols=91 Identities=12% Similarity=0.214 Sum_probs=67.3
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecc
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd 188 (417)
.+|+|+|. |.||..++++|++. |++++....+..... .-.|+.. ..+++|+.+ ..|++++++|+
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~------g~~~V~~VnP~~~g~---~i~G~~v----y~sl~el~~~~~~Dv~ii~vp~ 80 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLEC------GTKIVGGVTPGKGGQ---NVHGVPV----FDTVKEAVKETDANASVIFVPA 80 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT------TCCEEEEECTTCTTC---EETTEEE----ESSHHHHHHHHCCCEEEECCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHhC------CCeEEEEeCCCCCCc---eECCEee----eCCHHHHhhcCCCCEEEEccCH
Confidence 46788898 99999999999998 887554554421100 1157665 678899888 89999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccchh
Q 014863 189 AAQADNYEKIFSCMKPNSILGLSHGFLL 216 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i 216 (417)
..+.+++++.... ....+|+++.||..
T Consensus 81 ~~~~~~v~ea~~~-Gi~~vVi~t~G~~~ 107 (294)
T 2yv1_A 81 PFAKDAVFEAIDA-GIELIVVITEHIPV 107 (294)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECCSCCCH
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCH
Confidence 9999999886653 22335667889864
No 221
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.56 E-value=0.00015 Score=71.44 Aligned_cols=85 Identities=14% Similarity=0.149 Sum_probs=59.5
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH---cCceecCCCcCCHHhhhcc--CCeEEEe
Q 014863 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA---AGFTEENGTLGDIYETISG--SDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~---~G~~~~d~~~~~~~Eav~~--ADiViLa 185 (417)
.||||||+|.||. .++..|+.. .+++++...+.+ +..+.+.+ .|... ..+.++++.+ .|+|+++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~-~~~~~a~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~ 72 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIR-----ETLEVKTIFDLH-VNEKAAAPFKEKGVNF----TADLNELLTDPEIELITIC 72 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECTT-CCHHHHHHHHTTTCEE----ESCTHHHHSCTTCCEEEEC
T ss_pred eEEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEECCC-HHHHHHHhhCCCCCeE----ECCHHHHhcCCCCCEEEEe
Confidence 5899999999998 577777654 156665444443 44455555 45553 5789999875 8999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEE
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+|+..+.++....+ +.|+.|.
T Consensus 73 tp~~~h~~~~~~al---~aGk~Vl 93 (349)
T 3i23_A 73 TPAHTHYDLAKQAI---LAGKSVI 93 (349)
T ss_dssp SCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCcHHHHHHHHHHH---HcCCEEE
Confidence 99999988776543 4566444
No 222
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.55 E-value=0.00012 Score=72.63 Aligned_cols=87 Identities=13% Similarity=0.055 Sum_probs=58.3
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCceEEEEecCCchh-HHHHHHcCceecCCCcCCHHhhhcc--CCeEEEeec
Q 014863 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vivg~r~~~~s-~~~A~~~G~~~~d~~~~~~~Eav~~--ADiViLavp 187 (417)
.||||||+|.||.. ++.+|++. .+.+++...+.+... .+.+.+.+... .+.++++++++ .|+|++++|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQM-----QDIRIVAACDSDLERARRVHRFISDIP---VLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTC-----TTEEEEEEECSSHHHHGGGGGTSCSCC---EESSHHHHHHHSCCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHHhcCCCc---ccCCHHHHhcCCCCCEEEEcCC
Confidence 58999999999985 88998765 156665344443332 23333333221 25789999875 499999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 014863 188 DAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+..+.++....+ +.|+-|.
T Consensus 78 ~~~H~~~~~~al---~aGkhVl 96 (359)
T 3m2t_A 78 PQLHFEMGLLAM---SKGVNVF 96 (359)
T ss_dssp HHHHHHHHHHHH---HTTCEEE
T ss_pred cHHHHHHHHHHH---HCCCeEE
Confidence 999988776543 3455443
No 223
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.55 E-value=3.1e-05 Score=74.32 Aligned_cols=77 Identities=13% Similarity=0.005 Sum_probs=53.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCc--eecCCCcCCHHhhhc-cCCeEE
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF--TEENGTLGDIYETIS-GSDLVL 183 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~--~~~d~~~~~~~Eav~-~ADiVi 183 (417)
.++| ++|.|||.|.||.+++..|.+. |.+|++.+|+.++..+.+.+.+. ... ..+.+++.+ ++|+||
T Consensus 116 ~~~~-~~vlvlGaGg~g~a~a~~L~~~------G~~v~v~~R~~~~a~~l~~~~~~~~~~~---~~~~~~~~~~~~DivI 185 (272)
T 1p77_A 116 LRPN-QHVLILGAGGATKGVLLPLLQA------QQNIVLANRTFSKTKELAERFQPYGNIQ---AVSMDSIPLQTYDLVI 185 (272)
T ss_dssp CCTT-CEEEEECCSHHHHTTHHHHHHT------TCEEEEEESSHHHHHHHHHHHGGGSCEE---EEEGGGCCCSCCSEEE
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHccccCCeE---EeeHHHhccCCCCEEE
Confidence 4678 9999999999999999999998 88899988876555555544321 100 123444434 899999
Q ss_pred EeecchhHHH
Q 014863 184 LLISDAAQAD 193 (417)
Q Consensus 184 Lavpd~a~~~ 193 (417)
.++|.....+
T Consensus 186 n~t~~~~~~~ 195 (272)
T 1p77_A 186 NATSAGLSGG 195 (272)
T ss_dssp ECCCC-----
T ss_pred ECCCCCCCCC
Confidence 9999876543
No 224
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.54 E-value=0.00024 Score=65.66 Aligned_cols=93 Identities=12% Similarity=0.193 Sum_probs=62.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHH---hh-hccCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ET-ISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~---Ea-v~~ADiViLavp 187 (417)
++|.|+|+|.+|..+++.|.+. |+ |++..+. ....+.+. .|+....+...+.+ ++ +.+||.|+++++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~------g~-v~vid~~-~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS------EV-FVLAEDE-NVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS------EE-EEEESCG-GGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEECCChHHHHHHHHHHhC------Ce-EEEEECC-HHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 7899999999999999999888 88 7655544 44455554 66543212223332 33 789999999999
Q ss_pred chhHHHHHHHHHhcCCCC-cEEEEecc
Q 014863 188 DAAQADNYEKIFSCMKPN-SILGLSHG 213 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~G-aiL~~a~G 213 (417)
+......+...+..+.++ .++..+..
T Consensus 81 ~d~~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 81 SDSETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred CcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 876654444444455565 56666654
No 225
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.53 E-value=6.2e-05 Score=72.86 Aligned_cols=92 Identities=10% Similarity=0.061 Sum_probs=63.2
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcC---ceecCCCcCCHHhhh-ccCCe
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG---FTEENGTLGDIYETI-SGSDL 181 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G---~~~~d~~~~~~~Eav-~~ADi 181 (417)
.++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+.+.+ +. ..+.+++- .++|+
T Consensus 117 ~l~~-k~~lvlGaGg~~~aia~~L~~~------G~~~v~i~~R~~~~a~~la~~~~~~~~~-----~~~~~~l~~~~~Di 184 (272)
T 3pwz_A 117 PLRN-RRVLLLGAGGAVRGALLPFLQA------GPSELVIANRDMAKALALRNELDHSRLR-----ISRYEALEGQSFDI 184 (272)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------CCSEEEEECSCHHHHHHHHHHHCCTTEE-----EECSGGGTTCCCSE
T ss_pred CccC-CEEEEECccHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHHhccCCee-----EeeHHHhcccCCCE
Confidence 4678 9999999999999999999998 96 88888887666666666544 22 12333332 78999
Q ss_pred EEEeecchhHHHHHHHH-HhcCCCCcEEEEe
Q 014863 182 VLLLISDAAQADNYEKI-FSCMKPNSILGLS 211 (417)
Q Consensus 182 ViLavpd~a~~~Vl~eI-~p~Lk~GaiL~~a 211 (417)
||.+||.....+.. .+ ...++++.+|+|.
T Consensus 185 vInaTp~gm~~~~~-~i~~~~l~~~~~V~Dl 214 (272)
T 3pwz_A 185 VVNATSASLTADLP-PLPADVLGEAALAYEL 214 (272)
T ss_dssp EEECSSGGGGTCCC-CCCGGGGTTCSEEEES
T ss_pred EEECCCCCCCCCCC-CCCHHHhCcCCEEEEe
Confidence 99999976542210 00 1235566666644
No 226
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.53 E-value=0.00018 Score=70.66 Aligned_cols=86 Identities=15% Similarity=0.145 Sum_probs=61.4
Q ss_pred CEEEEEccc-chHHHHHHHHHhhhhhhcCCceEEEEecC-CchhHHHHHHcCc-eecCCCcCCHHhhhc--cCCeEEEee
Q 014863 112 NQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGF-TEENGTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G-~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~-~~~s~~~A~~~G~-~~~d~~~~~~~Eav~--~ADiViLav 186 (417)
.||||||+| .+|..++.+|+.. +.+.+++...+. .++..+.+.+.|. .. +.+.+|+++ +.|+|++++
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~a~~~~~~~~----~~~~~~ll~~~~vD~V~i~t 90 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNL----SHLFEITAVTSRTRSHAEEFAKMVGNPAV----FDSYEELLESGLVDAVDLTL 90 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTT----TTTEEEEEEECSSHHHHHHHHHHHSSCEE----ESCHHHHHHSSCCSEEEECC
T ss_pred eeEEEEecCHHHHHHHHHHHHhC----CCceEEEEEEcCCHHHHHHHHHHhCCCcc----cCCHHHHhcCCCCCEEEEeC
Confidence 589999999 8999999999764 114565443444 3444455666776 32 678999886 589999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEE
Q 014863 187 SDAAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL 208 (417)
|+..+.++....+ +.|+-|
T Consensus 91 p~~~H~~~~~~al---~aGkhV 109 (340)
T 1zh8_A 91 PVELNLPFIEKAL---RKGVHV 109 (340)
T ss_dssp CGGGHHHHHHHHH---HTTCEE
T ss_pred CchHHHHHHHHHH---HCCCcE
Confidence 9999988776543 346544
No 227
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.52 E-value=0.00036 Score=68.84 Aligned_cols=91 Identities=15% Similarity=0.145 Sum_probs=57.2
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHH--Hc-------CceecCCCcCCHHhhhccCC
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEAR--AA-------GFTEENGTLGDIYETISGSD 180 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~--~~-------G~~~~d~~~~~~~Eav~~AD 180 (417)
++||+|||.|.||.++|..|... |+ +|++.+....+....+. +. ..... ...+. +++++||
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~------g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~--~t~d~-~al~~aD 74 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK------NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVS--GSNTY-DDLAGAD 74 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEE--EECCG-GGGTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEE--ECCCH-HHhCCCC
Confidence 37999999999999999999988 87 86555544332211111 11 11110 12466 8899999
Q ss_pred eEEEee--cch-------------------hHHHHHHHHHhcCCCCcEEEEe
Q 014863 181 LVLLLI--SDA-------------------AQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 iViLav--pd~-------------------a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+||+++ |.. ...++.++|.++. |+.+|+++
T Consensus 75 ~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 125 (322)
T 1t2d_A 75 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVV 125 (322)
T ss_dssp EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 999998 421 2334555666665 66665544
No 228
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.52 E-value=8.8e-05 Score=71.01 Aligned_cols=94 Identities=21% Similarity=0.087 Sum_probs=62.0
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCc--eecCCCcCCHHhhh-ccCCeEE
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF--TEENGTLGDIYETI-SGSDLVL 183 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~--~~~d~~~~~~~Eav-~~ADiVi 183 (417)
.++| +++.|+|.|.||.+++..|.+. |.+|++.+|+.++..+.+.+.+. .. + ..+.+++. .++|+||
T Consensus 116 ~l~~-k~vlViGaGg~g~a~a~~L~~~------G~~V~v~~R~~~~~~~la~~~~~~~~~-~--~~~~~~~~~~~~DivV 185 (271)
T 1nyt_A 116 IRPG-LRILLIGAGGASRGVLLPLLSL------DCAVTITNRTVSRAEELAKLFAHTGSI-Q--ALSMDELEGHEFDLII 185 (271)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHHHHHHHHHTGGGSSE-E--ECCSGGGTTCCCSEEE
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHc------CCEEEEEECCHHHHHHHHHHhhccCCe-e--EecHHHhccCCCCEEE
Confidence 4678 9999999999999999999999 88888888875554555555432 10 0 22333333 5899999
Q ss_pred EeecchhHHHHHHHHH-hcCCCCcEEEEe
Q 014863 184 LLISDAAQADNYEKIF-SCMKPNSILGLS 211 (417)
Q Consensus 184 Lavpd~a~~~Vl~eI~-p~Lk~GaiL~~a 211 (417)
.++|.....++ ..+- ..++++.+++++
T Consensus 186 n~t~~~~~~~~-~~i~~~~l~~~~~v~D~ 213 (271)
T 1nyt_A 186 NATSSGISGDI-PAIPSSLIHPGIYCYDM 213 (271)
T ss_dssp ECCSCGGGTCC-CCCCGGGCCTTCEEEES
T ss_pred ECCCCCCCCCC-CCCCHHHcCCCCEEEEe
Confidence 99997654221 0111 124566666543
No 229
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.51 E-value=0.00013 Score=71.38 Aligned_cols=91 Identities=13% Similarity=0.241 Sum_probs=66.7
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc--c-CCeEEEeec
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--G-SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~-ADiViLavp 187 (417)
.+|+|+|. |.||..++++|++. |++++....+...-. .-.|+.. ..+++|+.+ . .|++++++|
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~------g~~~v~~VnP~~~g~---~i~G~~v----y~sl~el~~~~~~~DvaIi~vp 80 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEY------GTKVVAGVTPGKGGS---EVHGVPV----YDSVKEALAEHPEINTSIVFVP 80 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTTC---EETTEEE----ESSHHHHHHHCTTCCEEEECCC
T ss_pred CEEEEECCCCCHHHHHHHHHHhC------CCcEEEEeCCCCCCc---eECCEee----eCCHHHHhhcCCCCCEEEEecC
Confidence 46788898 99999999999998 888554554432100 1257765 578888876 5 999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchh
Q 014863 188 DAAQADNYEKIFSCMKPNSILGLSHGFLL 216 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i 216 (417)
+..+.+++++.... .-..+|+++.||..
T Consensus 81 ~~~~~~~v~ea~~~-Gi~~vVi~t~G~~~ 108 (297)
T 2yv2_A 81 APFAPDAVYEAVDA-GIRLVVVITEGIPV 108 (297)
T ss_dssp GGGHHHHHHHHHHT-TCSEEEECCCCCCH
T ss_pred HHHHHHHHHHHHHC-CCCEEEEECCCCCH
Confidence 99999999886653 22336677889864
No 230
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.51 E-value=0.00029 Score=70.00 Aligned_cols=84 Identities=17% Similarity=0.228 Sum_probs=58.2
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc-CceecCCCcCCHHhhhc--cCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS--GSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~d~~~~~~~Eav~--~ADiViLavp 187 (417)
.||||||+|.||.. ++..|+.. .+++++...+.+.... +.+. +... ..+.+++++ +.|+|++++|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~--~~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp 76 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSV-----PGLNLAFVASRDEEKV--KRDLPDVTV----IASPEAAVQHPDVDLVVIASP 76 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECSCHHHH--HHHCTTSEE----ESCHHHHHTCTTCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHHHH--HhhCCCCcE----ECCHHHHhcCCCCCEEEEeCC
Confidence 58999999999997 77777664 1556654444433322 2233 4443 578999987 7899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 014863 188 DAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+..+.++.... |+.|+.|.
T Consensus 77 ~~~H~~~~~~a---l~aGk~Vl 95 (364)
T 3e82_A 77 NATHAPLARLA---LNAGKHVV 95 (364)
T ss_dssp GGGHHHHHHHH---HHTTCEEE
T ss_pred hHHHHHHHHHH---HHCCCcEE
Confidence 99998877654 34566544
No 231
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.50 E-value=0.00034 Score=71.38 Aligned_cols=85 Identities=15% Similarity=0.184 Sum_probs=58.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHH-HH---HcCc---eecCCCcC----CHHhhhc--c
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-AR---AAGF---TEENGTLG----DIYETIS--G 178 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~-A~---~~G~---~~~d~~~~----~~~Eav~--~ 178 (417)
.||||||+|.||..++.+|+.. .+++++...+.+....+. +. +.|+ .. .. +.+++++ +
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~-----~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~----~~~~~~~~~~ll~~~~ 91 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARR-----DDVEIVAFADPDPYMVGRAQEILKKNGKKPAKV----FGNGNDDYKNMLKDKN 91 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEE----ECSSTTTHHHHTTCTT
T ss_pred ceEEEEecCHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCce----eccCCCCHHHHhcCCC
Confidence 6899999999999999999864 156665444444433332 22 3453 22 45 8899887 5
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEE
Q 014863 179 SDLVLLLISDAAQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 179 ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL 208 (417)
.|+|++++|+..+.++....+ +.|+.|
T Consensus 92 vD~V~i~tp~~~h~~~~~~al---~aGkhV 118 (444)
T 2ixa_A 92 IDAVFVSSPWEWHHEHGVAAM---KAGKIV 118 (444)
T ss_dssp CCEEEECCCGGGHHHHHHHHH---HTTCEE
T ss_pred CCEEEEcCCcHHHHHHHHHHH---HCCCeE
Confidence 899999999999988776543 345543
No 232
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.49 E-value=0.0003 Score=69.81 Aligned_cols=86 Identities=8% Similarity=-0.005 Sum_probs=61.3
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCceEEEEecCC-chhHHHHHHcCceecCCCcCCHHhhhcc--CCeEEEeec
Q 014863 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~Vivg~r~~-~~s~~~A~~~G~~~~d~~~~~~~Eav~~--ADiViLavp 187 (417)
.||||||+|.+|. .++..++.. +.+++...+.+ ++..+.+.+.|... ...+.+|++++ .|+|++++|
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~------~~~lvav~d~~~~~a~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRA------GARLAGFHEKDDALAAEFSAVYADAR---RIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHT------TCEEEEEECSCHHHHHHHHHHSSSCC---EESCHHHHHTCTTCCEEEECCC
T ss_pred cEEEEECcCHHHHHHHHHHhhcC------CcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 5899999999994 567777666 77765444443 34455667777432 25789999875 899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 014863 188 DAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+..+.++....+ +.|+-|.
T Consensus 98 ~~~H~~~~~~al---~aGkhVl 116 (361)
T 3u3x_A 98 SSERAELAIRAM---QHGKDVL 116 (361)
T ss_dssp HHHHHHHHHHHH---HTTCEEE
T ss_pred hHHHHHHHHHHH---HCCCeEE
Confidence 999988776543 4565443
No 233
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.47 E-value=7.6e-05 Score=73.35 Aligned_cols=86 Identities=12% Similarity=0.155 Sum_probs=56.5
Q ss_pred CEEEEEcccchHHH-HHHHH-HhhhhhhcCCceEE-EEecCCchhHHHHHH-cCceecCCCcCCHHhhhcc--CCeEEEe
Q 014863 112 NQIGVIGWGSQGPA-QAQNL-RDSLAEAKSDIVVK-VGLRKGSRSFAEARA-AGFTEENGTLGDIYETISG--SDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~L-r~s~~~~~~G~~Vi-vg~r~~~~s~~~A~~-~G~~~~d~~~~~~~Eav~~--ADiViLa 185 (417)
.||||||+|.||.. ++.++ ... .+++++ +.++...+. +.+.+ .|... ..++++++.+ .|+|+++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~-----~~~~l~av~d~~~~~~-~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~ 72 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRK-----DSWHVAHIFRRHAKPE-EQAPIYSHIHF----TSDLDEVLNDPDVKLVVVC 72 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCT-----TTEEEEEEECSSCCGG-GGSGGGTTCEE----ESCTHHHHTCTTEEEEEEC
T ss_pred eEEEEEecCHHHHHHHHHHHHhcC-----CCeEEEEEEcCCHhHH-HHHHhcCCCce----ECCHHHHhcCCCCCEEEEc
Confidence 68999999999986 45524 332 156665 344433332 33323 34443 5789999876 8999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEE
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILGL 210 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~~ 210 (417)
+|+..+.++.... ++.|+.|..
T Consensus 73 tp~~~h~~~~~~a---l~aGk~Vl~ 94 (345)
T 3f4l_A 73 THADSHFEYAKRA---LEAGKNVLV 94 (345)
T ss_dssp SCGGGHHHHHHHH---HHTTCEEEE
T ss_pred CChHHHHHHHHHH---HHcCCcEEE
Confidence 9999998877654 345665543
No 234
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.41 E-value=0.00081 Score=65.92 Aligned_cols=89 Identities=15% Similarity=0.110 Sum_probs=56.8
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCc---hhHHHHHHc--CceecCCCcCCHHhhhccCCeEE
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGS---RSFAEARAA--GFTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~---~s~~~A~~~--G~~~~d~~~~~~~Eav~~ADiVi 183 (417)
++||+|||.|+||.++|..|... |+ ++++.+.... ...+...-. .+.. ..+. +++++||+||
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~------g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~----t~d~-~~l~~aD~Vi 82 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK------GIADRLVLLDLSEGTKGATMDLEIFNLPNVEI----SKDL-SASAHSKVVI 82 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECCC-----CHHHHHHHTCTTEEE----ESCG-GGGTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE----eCCH-HHHCCCCEEE
Confidence 48999999999999999999888 77 7777665432 222222211 1221 2566 7799999999
Q ss_pred Eeecch---------------hHHHHHHHHHhcCCCCcEEEEe
Q 014863 184 LLISDA---------------AQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 184 Lavpd~---------------a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
++.... ...++++++..+. |+.+|+++
T Consensus 83 ~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 124 (303)
T 2i6t_A 83 FTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVA 124 (303)
T ss_dssp ECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEEC
T ss_pred EcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEc
Confidence 997211 1234555666655 66665443
No 235
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.41 E-value=0.0003 Score=69.60 Aligned_cols=84 Identities=11% Similarity=0.186 Sum_probs=58.5
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc-CceecCCCcCCHHhhhc--cCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS--GSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~d~~~~~~~Eav~--~ADiViLavp 187 (417)
.||||||+|.||.. ++..|+.. .+++++...+.+.. +.+.+. +... ..+.+++++ +.|+|++++|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~--~~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp 74 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVL-----DEYQISKIMTSRTE--EVKRDFPDAEV----VHELEEITNDPAIELVIVTTP 74 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECSCHH--HHHHHCTTSEE----ESSTHHHHTCTTCCEEEECSC
T ss_pred ceEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHH--HHHhhCCCCce----ECCHHHHhcCCCCCEEEEcCC
Confidence 58999999999997 77777654 15666544444332 234444 4443 578999987 7899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 014863 188 DAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+..+.++....+ +.|+-|.
T Consensus 75 ~~~H~~~~~~al---~aGkhVl 93 (358)
T 3gdo_A 75 SGLHYEHTMACI---QAGKHVV 93 (358)
T ss_dssp TTTHHHHHHHHH---HTTCEEE
T ss_pred cHHHHHHHHHHH---HcCCeEE
Confidence 999988776543 4566443
No 236
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.40 E-value=0.00028 Score=69.43 Aligned_cols=85 Identities=9% Similarity=0.135 Sum_probs=57.2
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhcc--CCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~--ADiViLavpd 188 (417)
.||||||+|.||.. ++..|+.. .+++++...+.+....+ +...+... ..+.++++.+ .|+|++++|+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~-----~~~~l~av~d~~~~~~~-~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp~ 77 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGT-----PGLELAGVSSSDASKVH-ADWPAIPV----VSDPQMLFNDPSIDLIVIPTPN 77 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECSCHHHHH-TTCSSCCE----ESCHHHHHHCSSCCEEEECSCT
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-----CCcEEEEEECCCHHHHH-hhCCCCce----ECCHHHHhcCCCCCEEEEeCCh
Confidence 58999999999997 78888764 14566544444332222 11123332 5789999875 8999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 014863 189 AAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
..+.++.... |+.|+-|.
T Consensus 78 ~~H~~~~~~a---l~aGkhV~ 95 (352)
T 3kux_A 78 DTHFPLAQSA---LAAGKHVV 95 (352)
T ss_dssp TTHHHHHHHH---HHTTCEEE
T ss_pred HHHHHHHHHH---HHCCCcEE
Confidence 9998877654 34566443
No 237
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.38 E-value=0.001 Score=65.05 Aligned_cols=67 Identities=15% Similarity=0.160 Sum_probs=44.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHH--cC-------ceecCCCcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA--AG-------FTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~--~G-------~~~~d~~~~~~~Eav~~ADi 181 (417)
+||+|||.|.||.+++..|... |+ +|++.+....+....+.+ .+ .... ...+. +++++||+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~------g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~--~t~d~-~a~~~aD~ 73 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK------ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVT--GTNNY-ADTANSDV 73 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEE--EESCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEE--ECCCH-HHHCCCCE
Confidence 6999999999999999999888 86 855554443322221211 11 1110 02456 78999999
Q ss_pred EEEeec
Q 014863 182 VLLLIS 187 (417)
Q Consensus 182 ViLavp 187 (417)
||++++
T Consensus 74 Vi~a~g 79 (309)
T 1ur5_A 74 IVVTSG 79 (309)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999984
No 238
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.37 E-value=0.0002 Score=69.42 Aligned_cols=88 Identities=16% Similarity=0.032 Sum_probs=62.5
Q ss_pred CCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch
Q 014863 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 110 g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~ 189 (417)
| +++.|||.|-+|.+++..|.+. |.+|.+.+|+.++..+.+ +.|+.. .+.+++ .++|+||.+||..
T Consensus 118 ~-k~vlvlGaGGaaraia~~L~~~------G~~v~V~nRt~~ka~~la-~~~~~~-----~~~~~l-~~~DiVInaTp~G 183 (269)
T 3phh_A 118 Y-QNALILGAGGSAKALACELKKQ------GLQVSVLNRSSRGLDFFQ-RLGCDC-----FMEPPK-SAFDLIINATSAS 183 (269)
T ss_dssp C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTHHHHH-HHTCEE-----ESSCCS-SCCSEEEECCTTC
T ss_pred C-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHH-HCCCeE-----ecHHHh-ccCCEEEEcccCC
Confidence 7 9999999999999999999998 888999999877776777 667553 233443 3899999999965
Q ss_pred hHHH-HHH-H-HHhcCCCCcEEEEe
Q 014863 190 AQAD-NYE-K-IFSCMKPNSILGLS 211 (417)
Q Consensus 190 a~~~-Vl~-e-I~p~Lk~GaiL~~a 211 (417)
...+ .++ + +...++++.+|+|.
T Consensus 184 m~~~~~l~~~~l~~~l~~~~~v~D~ 208 (269)
T 3phh_A 184 LHNELPLNKEVLKGYFKEGKLAYDL 208 (269)
T ss_dssp CCCSCSSCHHHHHHHHHHCSEEEES
T ss_pred CCCCCCCChHHHHhhCCCCCEEEEe
Confidence 3321 111 1 22234556666644
No 239
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.36 E-value=0.00031 Score=72.86 Aligned_cols=83 Identities=7% Similarity=0.098 Sum_probs=59.0
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCceEEEE-ecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEE
Q 014863 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVG-LRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~Vivg-~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViL 184 (417)
.||||||+ |.||..++.+|+.. ..+++++.. ++...+..+.+.+.|+.. ...+.+.+|+++ +.|+|++
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~----~~~~~lvav~d~~~~~a~~~a~~~g~~~-~~~~~d~~ell~~~~vD~V~I 114 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQL----SSQFQIVALYNPTLKSSLQTIEQLQLKH-ATGFDSLESFAQYKDIDMIVV 114 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHT----TTTEEEEEEECSCHHHHHHHHHHTTCTT-CEEESCHHHHHHCTTCSEEEE
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhc----CCCeEEEEEEeCCHHHHHHHHHHcCCCc-ceeeCCHHHHhcCCCCCEEEE
Confidence 68999999 99999999999763 015665533 443334445666677630 011678999885 6999999
Q ss_pred eecchhHHHHHHHHH
Q 014863 185 LISDAAQADNYEKIF 199 (417)
Q Consensus 185 avpd~a~~~Vl~eI~ 199 (417)
++|+..+.++....+
T Consensus 115 ~tp~~~H~~~~~~al 129 (479)
T 2nvw_A 115 SVKVPEHYEVVKNIL 129 (479)
T ss_dssp CSCHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHH
Confidence 999999988776543
No 240
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.36 E-value=0.00025 Score=70.17 Aligned_cols=84 Identities=10% Similarity=0.113 Sum_probs=58.0
Q ss_pred CEEEEEcccchHHH-HHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc-CceecCCCcCCHHhhhcc--CCeEEEeec
Q 014863 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETISG--SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~d~~~~~~~Eav~~--ADiViLavp 187 (417)
.||||||+|.||.. ++..|+.. .+++++...+.+... .+.+. +... +.+.+|++++ .|+|++|+|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~--~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp 74 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTN-----PHFELYKIVERSKEL--SKERYPQASI----VRSFKELTEDPEIDLIVVNTP 74 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHC-----TTEEEEEEECSSCCG--GGTTCTTSEE----ESCSHHHHTCTTCCEEEECSC
T ss_pred eEEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHHH--HHHhCCCCce----ECCHHHHhcCCCCCEEEEeCC
Confidence 58999999999997 77777664 156665444443332 23344 4443 5788999876 899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 014863 188 DAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+..+.++....+ +.|+-|.
T Consensus 75 ~~~H~~~~~~al---~aGkhVl 93 (362)
T 3fhl_A 75 DNTHYEYAGMAL---EAGKNVV 93 (362)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred hHHHHHHHHHHH---HCCCeEE
Confidence 999988776543 3465443
No 241
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.34 E-value=0.00028 Score=71.99 Aligned_cols=83 Identities=12% Similarity=0.151 Sum_probs=58.6
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCceEEEEecCC-chhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEE
Q 014863 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViL 184 (417)
.||||||+ |.||..++.+|++. ..+++++...+.+ .+..+.+.+.|+.. .....+.++++. +.|+|++
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~a~~~g~~~-~~~~~~~~~ll~~~~vD~V~i 95 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQL----SSQFQITALYSPKIETSIATIQRLKLSN-ATAFPTLESFASSSTIDMIVI 95 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHT----TTTEEEEEEECSSHHHHHHHHHHTTCTT-CEEESSHHHHHHCSSCSEEEE
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhc----CCCeEEEEEEeCCHHHHHHHHHHcCCCc-ceeeCCHHHHhcCCCCCEEEE
Confidence 58999999 99999999999763 0156654444443 34445566667630 001578999886 6899999
Q ss_pred eecchhHHHHHHHHH
Q 014863 185 LISDAAQADNYEKIF 199 (417)
Q Consensus 185 avpd~a~~~Vl~eI~ 199 (417)
++|+..+.++....+
T Consensus 96 ~tp~~~H~~~~~~al 110 (438)
T 3btv_A 96 AIQVASHYEVVMPLL 110 (438)
T ss_dssp CSCHHHHHHHHHHHH
T ss_pred eCCcHHHHHHHHHHH
Confidence 999999988776543
No 242
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.31 E-value=0.00012 Score=68.71 Aligned_cols=81 Identities=12% Similarity=0.275 Sum_probs=53.0
Q ss_pred CEEEEEcccchHHHHHHH--HHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch
Q 014863 112 NQIGVIGWGSQGPAQAQN--LRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~--Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~ 189 (417)
++|+|||+|++|.++++. .... |++++...+.+...... ...|+.+. ...++++.+++.|+|++++|..
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~------g~~iVg~~D~dp~k~g~-~i~gv~V~--~~~dl~eli~~~D~ViIAvPs~ 156 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNN------NTKISMAFDINESKIGT-EVGGVPVY--NLDDLEQHVKDESVAILTVPAV 156 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------------CCEEEEEESCTTTTTC-EETTEEEE--EGGGHHHHCSSCCEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccC------CcEEEEEEeCCHHHHHh-HhcCCeee--chhhHHHHHHhCCEEEEecCch
Confidence 689999999999999994 3333 77776666654432221 11343321 1456788887679999999999
Q ss_pred hHHHHHHHHHhc
Q 014863 190 AQADNYEKIFSC 201 (417)
Q Consensus 190 a~~~Vl~eI~p~ 201 (417)
.+.++.+.+...
T Consensus 157 ~~~ei~~~l~~a 168 (215)
T 2vt3_A 157 AAQSITDRLVAL 168 (215)
T ss_dssp HHHHHHHHHHHT
T ss_pred hHHHHHHHHHHc
Confidence 888888776543
No 243
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.31 E-value=0.00036 Score=69.24 Aligned_cols=86 Identities=12% Similarity=0.083 Sum_probs=63.7
Q ss_pred CEEEEEc-ccchHHH-HH----HHHHhhhhhhcCC-ce----------EEEEecCCchhHHHHHHcCceecCCCcCCHHh
Q 014863 112 NQIGVIG-WGSQGPA-QA----QNLRDSLAEAKSD-IV----------VKVGLRKGSRSFAEARAAGFTEENGTLGDIYE 174 (417)
Q Consensus 112 kkIgIIG-~G~mG~A-iA----~~Lr~s~~~~~~G-~~----------Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~E 174 (417)
.|||||| +|.||.. ++ ..+++. + .. +.+.++..++..+.+.+.|+.. ...+.+|
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~------~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~---~~~~~~~ 77 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQ------GGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIAR---WTTDLDA 77 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHH------TSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCC---EESCHHH
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhc------CceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCc---ccCCHHH
Confidence 4899999 9999998 78 778776 3 22 1256666666667778888742 1578999
Q ss_pred hhcc--CCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 014863 175 TISG--SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 175 av~~--ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
++++ .|+|++++|+..+.++.... |+.|+.|.
T Consensus 78 ll~~~~iD~V~i~tp~~~h~~~~~~a---l~~Gk~V~ 111 (383)
T 3oqb_A 78 ALADKNDTMFFDAATTQARPGLLTQA---INAGKHVY 111 (383)
T ss_dssp HHHCSSCCEEEECSCSSSSHHHHHHH---HTTTCEEE
T ss_pred HhcCCCCCEEEECCCchHHHHHHHHH---HHCCCeEE
Confidence 9865 89999999999998877654 44566554
No 244
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.30 E-value=0.00037 Score=68.22 Aligned_cols=86 Identities=9% Similarity=0.003 Sum_probs=57.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCc--hh---HHHHHHcCceecCCCcCCHHhhhcc--CCeEEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RS---FAEARAAGFTEENGTLGDIYETISG--SDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~--~s---~~~A~~~G~~~~d~~~~~~~Eav~~--ADiViL 184 (417)
.||||||+|.+|..++..| .. +.+++...+.+. +. .+.+.+.|+.. ....|.+|++++ .|+|++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~------~~~lvav~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~~vD~V~I 73 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DE------ECSITGIAPGVPEEDLSKLEKAISEMNIKP--KKYNNWWEMLEKEKPDILVI 73 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CT------TEEEEEEECSSTTCCCHHHHHHHHTTTCCC--EECSSHHHHHHHHCCSEEEE
T ss_pred eEEEEEccchhHHHHHHhc-CC------CcEEEEEecCCchhhHHHHHHHHHHcCCCC--cccCCHHHHhcCCCCCEEEE
Confidence 6999999999999888877 44 677654444332 21 22233346521 126789998864 899999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEE
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
++|+..+.++....+ +.|+-|.
T Consensus 74 ~tp~~~H~~~~~~al---~aGkhVl 95 (337)
T 3ip3_A 74 NTVFSLNGKILLEAL---ERKIHAF 95 (337)
T ss_dssp CSSHHHHHHHHHHHH---HTTCEEE
T ss_pred eCCcchHHHHHHHHH---HCCCcEE
Confidence 999999988776543 3455443
No 245
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.30 E-value=0.00082 Score=66.17 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=62.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCC-ch-hHHHHHHcCceecCCCcCCHHhhh-----ccCCeEEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SR-SFAEARAAGFTEENGTLGDIYETI-----SGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-~~-s~~~A~~~G~~~~d~~~~~~~Eav-----~~ADiViL 184 (417)
.||||||+|.+|..+++.|.+.. .+.+++...+.+ ++ ..+.+.+.|.... ..+.++++ ++.|+|++
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~----~~~elvav~d~~~~~~~~~~a~~~g~~~~---~~~~e~ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNA----KYLEMGAMVGIDAASDGLARAQRMGVTTT---YAGVEGLIKLPEFADIDFVFD 77 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC----SSEEEEEEECSCTTCHHHHHHHHTTCCEE---SSHHHHHHHSGGGGGEEEEEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhC----cCeEEEEEEeCChhhhHHHHHHHcCCCcc---cCCHHHHHhccCCCCCcEEEE
Confidence 58999999999999999995520 155554444443 33 3566777887521 23556664 45899999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
++|+..+.++....... ++|+.|++...
T Consensus 78 atp~~~h~~~a~~al~a-~~Gk~Vi~ekp 105 (312)
T 1nvm_B 78 ATSASAHVQNEALLRQA-KPGIRLIDLTP 105 (312)
T ss_dssp CSCHHHHHHHHHHHHHH-CTTCEEEECST
T ss_pred CCChHHHHHHHHHHHHh-CCCCEEEEcCc
Confidence 99998888877655432 24777766443
No 246
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.29 E-value=0.0011 Score=64.77 Aligned_cols=67 Identities=18% Similarity=0.160 Sum_probs=45.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHH----H---cCc--eecCCCcCCHHhhhccCC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR----A---AGF--TEENGTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~----~---~G~--~~~d~~~~~~~Eav~~AD 180 (417)
|||+|||.|++|.++|..|... |+ ++.+.++...+....+. . .+. ... ...+ .+++++||
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~------~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~--~t~d-~~a~~~aD 71 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIV--GGAD-YSLLKGSE 71 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEE--EESC-GGGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEE--EeCC-HHHhCCCC
Confidence 6899999999999999999988 77 77776665333211111 1 111 110 0235 78999999
Q ss_pred eEEEeec
Q 014863 181 LVLLLIS 187 (417)
Q Consensus 181 iViLavp 187 (417)
+||++..
T Consensus 72 iVViaag 78 (294)
T 1oju_A 72 IIVVTAG 78 (294)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999974
No 247
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.28 E-value=0.001 Score=67.84 Aligned_cols=94 Identities=14% Similarity=0.183 Sum_probs=64.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCH---Hhh-hccCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YET-ISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~---~Ea-v~~ADiViLavp 187 (417)
++|.|||+|.+|..+++.|++. |++|++.++. ....+.+.+.|+....+...+. .++ +.+||+||++++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~------g~~vvvId~d-~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS------GVKMVVLDHD-PDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEECC-HHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 6799999999999999999999 9988766544 5556777778874321112232 233 688999999999
Q ss_pred chhHHHHHHHHHhcCCCC-cEEEEec
Q 014863 188 DAAQADNYEKIFSCMKPN-SILGLSH 212 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~G-aiL~~a~ 212 (417)
+......+-.....+.|+ .+|.-+.
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 876654444444445455 4555443
No 248
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.25 E-value=0.00023 Score=71.70 Aligned_cols=94 Identities=10% Similarity=0.070 Sum_probs=63.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEE-EEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchh
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi-vg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a 190 (417)
.||+|||+| +|...+..+++. ..+++++ |..+..+++.+.|.+.|+.. ..|.++++.+.|+|+++||+..
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~----~~~~elvav~~~~~~~a~~~a~~~gv~~----~~~~~~l~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQP----PEGLELVGLLAQGSARSRELAHAFGIPL----YTSPEQITGMPDIACIVVRSTV 78 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSC----CTTEEEEEEECCSSHHHHHHHHHTTCCE----ESSGGGCCSCCSEEEECCC--C
T ss_pred CEEEEEehH-HHHHHHHHHHhC----CCCeEEEEEECCCHHHHHHHHHHhCCCE----ECCHHHHhcCCCEEEEECCCcc
Confidence 589999999 799888887664 1145654 34555567778899999875 6799999999999999999987
Q ss_pred HHHH-HHHHHhcCCCCcEEEEeccc
Q 014863 191 QADN-YEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 191 ~~~V-l~eI~p~Lk~GaiL~~a~G~ 214 (417)
+... ++-....|+.|+-|..=.-+
T Consensus 79 h~~~~~~~a~~al~aGkhVl~EKPl 103 (372)
T 4gmf_A 79 AGGAGTQLARHFLARGVHVIQEHPL 103 (372)
T ss_dssp TTSHHHHHHHHHHHTTCEEEEESCC
T ss_pred cchhHHHHHHHHHHcCCcEEEecCC
Confidence 7321 22223345567755433333
No 249
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.24 E-value=0.00023 Score=68.85 Aligned_cols=83 Identities=10% Similarity=0.155 Sum_probs=55.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecch
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd~ 189 (417)
.||||||+|.||..++.+|.... ...+.+++...+.+. .+...|+. ..+.+|+++ +.|+|++++|+.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~--~~~~~~lvav~d~~~----~a~~~g~~-----~~~~~ell~~~~vD~V~i~tp~~ 76 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPR--SAAFLNLIGFVSRRE----LGSLDEVR-----QISLEDALRSQEIDVAYICSESS 76 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHH--HHTTEEEEEEECSSC----CCEETTEE-----BCCHHHHHHCSSEEEEEECSCGG
T ss_pred ceEEEEEEcHHHHHHHHHHhccc--cCCCEEEEEEECchH----HHHHcCCC-----CCCHHHHhcCCCCCEEEEeCCcH
Confidence 68999999999999999986520 001455543333221 12234554 468899886 689999999999
Q ss_pred hHHHHHHHHHhcCCCCcEE
Q 014863 190 AQADNYEKIFSCMKPNSIL 208 (417)
Q Consensus 190 a~~~Vl~eI~p~Lk~GaiL 208 (417)
.+.++....+ +.|+.|
T Consensus 77 ~H~~~~~~al---~aGkhV 92 (294)
T 1lc0_A 77 SHEDYIRQFL---QAGKHV 92 (294)
T ss_dssp GHHHHHHHHH---HTTCEE
T ss_pred hHHHHHHHHH---HCCCcE
Confidence 9988776543 456643
No 250
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.24 E-value=0.0013 Score=65.24 Aligned_cols=72 Identities=19% Similarity=0.157 Sum_probs=47.2
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhH----HHHHH-----cCceecCCCcCCHHhh
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSF----AEARA-----AGFTEENGTLGDIYET 175 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~----~~A~~-----~G~~~~d~~~~~~~Ea 175 (417)
..++. +||+|||.|.+|.++|..|... |+ ++.+.+....+.. +.... ...... ...+. ++
T Consensus 3 ~~m~~-~kI~viGaG~vG~~~a~~l~~~------~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~--~t~d~-~a 72 (324)
T 3gvi_A 3 GSMAR-NKIALIGSGMIGGTLAHLAGLK------ELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFT--GANDY-AA 72 (324)
T ss_dssp ---CC-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE--EESSG-GG
T ss_pred CCCcC-CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEE--EeCCH-HH
Confidence 44555 8999999999999999999988 77 8777766544321 11111 111110 02344 88
Q ss_pred hccCCeEEEeec
Q 014863 176 ISGSDLVLLLIS 187 (417)
Q Consensus 176 v~~ADiViLavp 187 (417)
+++||+||++..
T Consensus 73 ~~~aDiVIiaag 84 (324)
T 3gvi_A 73 IEGADVVIVTAG 84 (324)
T ss_dssp GTTCSEEEECCS
T ss_pred HCCCCEEEEccC
Confidence 999999999974
No 251
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.22 E-value=0.00092 Score=65.74 Aligned_cols=89 Identities=12% Similarity=0.180 Sum_probs=54.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHH--cCc------eecCCCcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGF------TEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G~------~~~d~~~~~~~Eav~~ADi 181 (417)
+||+|||.|++|.+++..|... ++ ++++.+....+....+.+ .+. .. .. +..+++++||+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~------~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i---~~-~~~~a~~~aDv 77 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR------QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSL---YA-GDYSDVKDCDV 77 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEE---C---CGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEE---EE-CCHHHhCCCCE
Confidence 6899999999999999999888 76 676665443322222222 221 11 02 23678999999
Q ss_pred EEEeecchh----------------HHHHHHHHHhcCCCCcEEEEe
Q 014863 182 VLLLISDAA----------------QADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 182 ViLavpd~a----------------~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
||++++... ..++.+.|.++ .|+.+|+..
T Consensus 78 Vii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (318)
T 1y6j_A 78 IVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV 122 (318)
T ss_dssp EEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred EEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 999987433 23344456655 577766554
No 252
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.20 E-value=0.00029 Score=66.19 Aligned_cols=110 Identities=15% Similarity=0.222 Sum_probs=70.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCch-hHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-SFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~-s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd 188 (417)
++++|||+|++|.++++.+... ..|++++...+.++. ....+.-.|+.+.+ ..++++.++ +.|++++|+|.
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~----~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~--~~dL~~~v~~~~Id~vIIAvPs 158 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHD----RNKMQISMAFDLDSNDLVGKTTEDGIPVYG--ISTINDHLIDSDIETAILTVPS 158 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCT----TSSEEEEEEEECTTSTTTTCBCTTCCBEEE--GGGHHHHC-CCSCCEEEECSCG
T ss_pred CEEEEECcCHHHHHHHHhhhcc----cCCeEEEEEEeCCchhccCceeECCeEEeC--HHHHHHHHHHcCCCEEEEecCc
Confidence 6899999999999999874211 117777766666554 33221124655311 356777776 49999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCCCCCcEEEecc
Q 014863 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCP 237 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di~VI~v~P 237 (417)
....++.+.+...=- ..++-|++- .+.+|+++.|--++.
T Consensus 159 ~~aq~v~d~lv~~GI-k~I~nFap~---------~l~vp~~v~v~~vdl 197 (212)
T 3keo_A 159 TEAQEVADILVKAGI-KGILSFSPV---------HLTLPKDIIVQYVDL 197 (212)
T ss_dssp GGHHHHHHHHHHHTC-CEEEECSSS---------CCCCCTTSEEEECCH
T ss_pred hhHHHHHHHHHHcCC-CEEEEcCCc---------ccCCCCCcEEEEeCc
Confidence 888888877654321 235665552 235677777766655
No 253
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.16 E-value=0.00065 Score=67.43 Aligned_cols=84 Identities=15% Similarity=0.204 Sum_probs=53.7
Q ss_pred cccCCC-CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC---HHhhhccCCe
Q 014863 106 DAFNGI-NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDL 181 (417)
Q Consensus 106 ~~l~g~-kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~Eav~~ADi 181 (417)
+.++|- |||.|||+|.+|..++..|.+. ++|.++++. .+..+.+.+..-.. .-.+.+ +.++++++|+
T Consensus 10 ~~~~g~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~-~~~~~~~~~~~~~~-~~d~~d~~~l~~~~~~~Dv 80 (365)
T 3abi_A 10 HHIEGRHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVN-NENLEKVKEFATPL-KVDASNFDKLVEVMKEFEL 80 (365)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESC-HHHHHHHTTTSEEE-ECCTTCHHHHHHHHTTCSE
T ss_pred ccccCCccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcC-HHHHHHHhccCCcE-EEecCCHHHHHHHHhCCCE
Confidence 344552 6899999999999999998654 577777765 33344443322111 000223 4567899999
Q ss_pred EEEeecchhHHHHHHHH
Q 014863 182 VLLLISDAAQADNYEKI 198 (417)
Q Consensus 182 ViLavpd~a~~~Vl~eI 198 (417)
||.++|+..+..+.+..
T Consensus 81 Vi~~~p~~~~~~v~~~~ 97 (365)
T 3abi_A 81 VIGALPGFLGFKSIKAA 97 (365)
T ss_dssp EEECCCGGGHHHHHHHH
T ss_pred EEEecCCcccchHHHHH
Confidence 99999999887777643
No 254
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.16 E-value=0.0019 Score=63.92 Aligned_cols=67 Identities=18% Similarity=0.142 Sum_probs=45.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHH--HcC-------ceecCCCcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEAR--AAG-------FTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~--~~G-------~~~~d~~~~~~~Eav~~ADi 181 (417)
+||+|||.|.||.++|..|... |+ ++.+.+....+....+. ... ... ...+..+++++||+
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~------~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v---~~t~d~~a~~~aDv 76 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK------QLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKV---RGTNDYKDLENSDV 76 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCE---EEESCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEE---EEcCCHHHHCCCCE
Confidence 8999999999999999999988 76 77776665443222221 111 111 01123578999999
Q ss_pred EEEeec
Q 014863 182 VLLLIS 187 (417)
Q Consensus 182 ViLavp 187 (417)
||++..
T Consensus 77 VIi~ag 82 (321)
T 3p7m_A 77 VIVTAG 82 (321)
T ss_dssp EEECCS
T ss_pred EEEcCC
Confidence 999964
No 255
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.14 E-value=0.00019 Score=71.43 Aligned_cols=96 Identities=13% Similarity=0.078 Sum_probs=65.3
Q ss_pred ccCCCCEEEEEcccch-HHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCC----c--CCHHhhhccC
Q 014863 107 AFNGINQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT----L--GDIYETISGS 179 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~m-G~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~----~--~~~~Eav~~A 179 (417)
.++| +++.|||.|.| |..+|+.|... |..|.+.+|+..+.++.+.+.+......+ + .++++.+++|
T Consensus 174 ~l~g-k~vvVIG~G~iVG~~~A~~L~~~------gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~A 246 (320)
T 1edz_A 174 RLYG-KKCIVINRSEIVGRPLAALLAND------GATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDS 246 (320)
T ss_dssp TTTT-CEEEEECCCTTTHHHHHHHHHTT------SCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHC
T ss_pred CCCC-CEEEEECCCcchHHHHHHHHHHC------CCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccC
Confidence 6889 99999999976 99999999988 88888887764333333333332100000 1 3578899999
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
|+||.+|+-... ++. ...+++|.+|++++-
T Consensus 247 DIVIsAtg~p~~--vI~--~e~vk~GavVIDVgi 276 (320)
T 1edz_A 247 DVVITGVPSENY--KFP--TEYIKEGAVCINFAC 276 (320)
T ss_dssp SEEEECCCCTTC--CBC--TTTSCTTEEEEECSS
T ss_pred CEEEECCCCCcc--eeC--HHHcCCCeEEEEcCC
Confidence 999999985321 011 133688988887763
No 256
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.13 E-value=0.00042 Score=69.08 Aligned_cols=98 Identities=10% Similarity=0.036 Sum_probs=66.9
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCcee---cCCCcCCHHhhhccCCeEE
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE---ENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~---~d~~~~~~~Eav~~ADiVi 183 (417)
.+++ ++|.|||.|.+|.+.++.++.. |.+|++.+++.. ..+.+.+.|... .+....+..+.++++|+||
T Consensus 164 ~l~~-~~VlViGaGgvG~~aa~~a~~~------Ga~V~v~dr~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 164 GVKP-GKVVILGGGVVGTEAAKMAVGL------GAQVQIFDINVE-RLSYLETLFGSRVELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp TBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHH-HHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCHH-HHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEE
Confidence 4777 9999999999999999999998 988887777643 344444443210 0000123456778999999
Q ss_pred EeecchhH--HH-HHHHHHhcCCCCcEEEEec
Q 014863 184 LLISDAAQ--AD-NYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 184 Lavpd~a~--~~-Vl~eI~p~Lk~GaiL~~a~ 212 (417)
.+++.... .. +.++..+.|++|.+|++.+
T Consensus 236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 99975331 11 1345567789999888764
No 257
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.12 E-value=0.0006 Score=66.23 Aligned_cols=98 Identities=19% Similarity=0.131 Sum_probs=63.9
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcC-----ceecCCCcCCHHhhhccCC
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG-----FTEENGTLGDIYETISGSD 180 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G-----~~~~d~~~~~~~Eav~~AD 180 (417)
.++| +++.|+|.|-+|.+++..|.+. |. +|.+.+|+.++..+.+.+.+ +........+..++++++|
T Consensus 124 ~l~~-k~vlVlGaGG~g~aia~~L~~~------G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~D 196 (283)
T 3jyo_A 124 NAKL-DSVVQVGAGGVGNAVAYALVTH------GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAAD 196 (283)
T ss_dssp TCCC-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSS
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCC
Confidence 5778 9999999999999999999998 98 68888887555444444322 1100000236778889999
Q ss_pred eEEEeecchhHHHHHHHH-HhcCCCCcEEEEe
Q 014863 181 LVLLLISDAAQADNYEKI-FSCMKPNSILGLS 211 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI-~p~Lk~GaiL~~a 211 (417)
+||.+||.......-..+ ...++++.+|.|.
T Consensus 197 iVInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dl 228 (283)
T 3jyo_A 197 GVVNATPMGMPAHPGTAFDVSCLTKDHWVGDV 228 (283)
T ss_dssp EEEECSSTTSTTSCSCSSCGGGCCTTCEEEEC
T ss_pred EEEECCCCCCCCCCCCCCCHHHhCCCCEEEEe
Confidence 999999965432100001 2235566665544
No 258
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.12 E-value=0.00091 Score=65.62 Aligned_cols=80 Identities=10% Similarity=0.122 Sum_probs=58.2
Q ss_pred CEEEEEcccchHH-HHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhcc---CCeEEEeec
Q 014863 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG---SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~-AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~---ADiViLavp 187 (417)
.||||||+|.||. .++..|+.. .+.+++...+.+.+ ..|+.. ..+.++++++ .|+|++++|
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~-----~~~~lvav~d~~~~------~~g~~~----~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKN-----ANFKLVATASRHGT------VEGVNS----YTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHC-----TTEEEEEEECSSCC------CTTSEE----ESSHHHHHHHCTTCCEEEECSC
T ss_pred ceEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEEeCChh------hcCCCc----cCCHHHHHhCCCCCCEEEEeCC
Confidence 5899999999998 789998875 15565544444332 246664 6789998865 899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 014863 188 DAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+..+.++....+ +.|+-|.
T Consensus 91 ~~~H~~~~~~al---~aGkhVl 109 (330)
T 4ew6_A 91 PQYRYEAAYKAL---VAGKHVF 109 (330)
T ss_dssp HHHHHHHHHHHH---HTTCEEE
T ss_pred cHHHHHHHHHHH---HcCCcEE
Confidence 999988776543 3566444
No 259
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.10 E-value=0.0015 Score=64.50 Aligned_cols=68 Identities=21% Similarity=0.168 Sum_probs=46.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHH-------c--CceecCCCcCCHHhhhccCC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA-------A--GFTEENGTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~-------~--G~~~~d~~~~~~~Eav~~AD 180 (417)
|||+|||.|.||.++|..|... |+ ++++.+....+....+.+ . .... ...+..+++++||
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v---~~~~~~~a~~~aD 71 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ------DVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRV---TGTNDYGPTEDSD 71 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEE---EEESSSGGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEE---EECCCHHHhCCCC
Confidence 6899999999999999999988 76 776666554332212111 0 1111 0124568899999
Q ss_pred eEEEeecc
Q 014863 181 LVLLLISD 188 (417)
Q Consensus 181 iViLavpd 188 (417)
+||++.+.
T Consensus 72 vVii~ag~ 79 (314)
T 3nep_X 72 VCIITAGL 79 (314)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999753
No 260
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=97.08 E-value=0.0016 Score=64.64 Aligned_cols=70 Identities=21% Similarity=0.222 Sum_probs=45.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHH--HHcCceec--C-CCcCCHHhhhccCCeEEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEA--RAAGFTEE--N-GTLGDIYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A--~~~G~~~~--d-~~~~~~~Eav~~ADiViL 184 (417)
+||+|||.|.+|.++|..|... |+ ++++.+....+....+ ...++... + ....+..+++++||+||+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~------~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi 79 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ------GITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCI 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEE
Confidence 7999999999999999999998 76 6666555432222212 12221100 0 001233568999999999
Q ss_pred eec
Q 014863 185 LIS 187 (417)
Q Consensus 185 avp 187 (417)
+..
T Consensus 80 ~ag 82 (326)
T 3pqe_A 80 CAG 82 (326)
T ss_dssp CCS
T ss_pred ecc
Confidence 974
No 261
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.07 E-value=0.0024 Score=62.63 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=44.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHH--cCceec--C-CCcCCHHhhhccCCeEEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGFTEE--N-GTLGDIYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G~~~~--d-~~~~~~~Eav~~ADiViL 184 (417)
+||+|||.|++|.+++..|... ++ ++.+.+....+....+.+ .+.... + ....+..+++++||+||+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~------~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi 80 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQ------SIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVI 80 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEE
Confidence 6999999999999999999887 65 565544332222111221 111000 0 001144678999999999
Q ss_pred eecc
Q 014863 185 LISD 188 (417)
Q Consensus 185 avpd 188 (417)
+++.
T Consensus 81 ~ag~ 84 (317)
T 3d0o_A 81 CAGA 84 (317)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9863
No 262
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.06 E-value=0.00091 Score=65.21 Aligned_cols=74 Identities=16% Similarity=0.208 Sum_probs=59.4
Q ss_pred cCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEee
Q 014863 108 FNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 108 l~g~kkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLav 186 (417)
++| +++.|||.|. +|..+|+.|... |..|.+..+. ..++++.+++||+||.++
T Consensus 148 l~G-k~vvVvG~s~iVG~plA~lL~~~------gAtVtv~~~~-------------------t~~L~~~~~~ADIVI~Av 201 (276)
T 3ngx_A 148 YHE-NTVTIVNRSPVVGRPLSMMLLNR------NYTVSVCHSK-------------------TKDIGSMTRSSKIVVVAV 201 (276)
T ss_dssp CCS-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHHHSSEEEECS
T ss_pred cCC-CEEEEEcCChHHHHHHHHHHHHC------CCeEEEEeCC-------------------cccHHHhhccCCEEEECC
Confidence 899 9999999985 899999999998 9888877542 236889999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 187 SDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+-.. ++. ..++|+|++|++++
T Consensus 202 g~p~---~I~--~~~vk~GavVIDvg 222 (276)
T 3ngx_A 202 GRPG---FLN--REMVTPGSVVIDVG 222 (276)
T ss_dssp SCTT---CBC--GGGCCTTCEEEECC
T ss_pred CCCc---ccc--HhhccCCcEEEEec
Confidence 8532 222 24579999998775
No 263
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=97.06 E-value=0.0011 Score=66.75 Aligned_cols=66 Identities=21% Similarity=0.227 Sum_probs=50.5
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc-cCCeEEEe
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLL 185 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~-~ADiViLa 185 (417)
.|+| ++|+|+|+|++|...|+.|+.. |.+|++.+.. ....+.+.+.|... .+.+++.. +||+++.|
T Consensus 172 ~L~G-ktV~I~G~GnVG~~~A~~l~~~------GakVvvsD~~-~~~~~~a~~~ga~~-----v~~~ell~~~~DIliP~ 238 (355)
T 1c1d_A 172 SLDG-LTVLVQGLGAVGGSLASLAAEA------GAQLLVADTD-TERVAHAVALGHTA-----VALEDVLSTPCDVFAPC 238 (355)
T ss_dssp CSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCEE-----CCGGGGGGCCCSEEEEC
T ss_pred CCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEeCC-ccHHHHHHhcCCEE-----eChHHhhcCccceecHh
Confidence 6899 9999999999999999999988 9998855443 33245566667653 35667776 89998743
No 264
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.06 E-value=0.002 Score=63.10 Aligned_cols=89 Identities=25% Similarity=0.221 Sum_probs=55.1
Q ss_pred EEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHc---------CceecCCCcCCHHhhhccCCeE
Q 014863 113 QIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAA---------GFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 113 kIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~---------G~~~~d~~~~~~~Eav~~ADiV 182 (417)
||+|||.|+||.+++..|... ++ ++++.+....+....+.+. ..... ...+. +++++||+|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~------~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~--~t~d~-~a~~~aD~V 71 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR------GYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRIS--GSNSY-EDMRGSDIV 71 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH------TCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEE--EESCG-GGGTTCSEE
T ss_pred CEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEE--ECCCH-HHhCCCCEE
Confidence 699999999999999999887 76 5766665533222212211 21110 01455 789999999
Q ss_pred EEeecchh----------------HHHHHHHHHhcCCCCcEEEEe
Q 014863 183 LLLISDAA----------------QADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 183 iLavpd~a----------------~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
|++.+... ..++.+++..+- |+.++++.
T Consensus 72 i~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~ 115 (308)
T 2d4a_B 72 LVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVIT 115 (308)
T ss_dssp EECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 99966433 334555565554 66654433
No 265
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.04 E-value=0.0018 Score=64.46 Aligned_cols=69 Identities=25% Similarity=0.229 Sum_probs=43.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHH--cC--ceecC--CCcCCHHhhhccCCeEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG--FTEEN--GTLGDIYETISGSDLVL 183 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G--~~~~d--~~~~~~~Eav~~ADiVi 183 (417)
+||+|||.|.||.++|..|... |+ ++++.+....+....+.+ ++ +.... ....++++ +++||+||
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~------g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVI 94 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK------DLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVV 94 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH------CCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEE
Confidence 8999999999999999999988 86 666655543222222211 11 10000 01235554 89999999
Q ss_pred Eeec
Q 014863 184 LLIS 187 (417)
Q Consensus 184 Lavp 187 (417)
++..
T Consensus 95 itaG 98 (330)
T 3ldh_A 95 ITAG 98 (330)
T ss_dssp ECCS
T ss_pred EeCC
Confidence 9853
No 266
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.03 E-value=0.0004 Score=67.69 Aligned_cols=71 Identities=15% Similarity=0.148 Sum_probs=51.9
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
.++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+...+... ..+..+ + ++|+||.+
T Consensus 119 ~~~~-k~vlvlGaGGaaraia~~L~~~------G~~~v~v~nRt~~ka~~La~~~~~~~----~~~l~~-l-~~DivIna 185 (282)
T 3fbt_A 119 EIKN-NICVVLGSGGAARAVLQYLKDN------FAKDIYVVTRNPEKTSEIYGEFKVIS----YDELSN-L-KGDVIINC 185 (282)
T ss_dssp CCTT-SEEEEECSSTTHHHHHHHHHHT------TCSEEEEEESCHHHHHHHCTTSEEEE----HHHHTT-C-CCSEEEEC
T ss_pred CccC-CEEEEECCcHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHhcCccc----HHHHHh-c-cCCEEEEC
Confidence 3678 9999999999999999999998 98 88888887555444443322221 223334 4 89999999
Q ss_pred ecchh
Q 014863 186 ISDAA 190 (417)
Q Consensus 186 vpd~a 190 (417)
||...
T Consensus 186 Tp~Gm 190 (282)
T 3fbt_A 186 TPKGM 190 (282)
T ss_dssp SSTTS
T ss_pred CccCc
Confidence 98643
No 267
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.02 E-value=0.0008 Score=65.22 Aligned_cols=161 Identities=14% Similarity=0.113 Sum_probs=94.6
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhH---HHHH----HcCceecCCCcCCHHhhhccCCeE
Q 014863 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEAR----AAGFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 111 ~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~---~~A~----~~G~~~~d~~~~~~~Eav~~ADiV 182 (417)
|+||+|+| +|.||..+++.+.+. .+++++...+...... +... ..|+.. ..++++++.++|+|
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~-----~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v----~~dl~~ll~~~DVV 77 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA-----PDATLVGALDRTGSPQLGQDAGAFLGKQTGVAL----TDDIERVCAEADYL 77 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC-----TTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBC----BCCHHHHHHHCSEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEEecCcccccccHHHHhCCCCCcee----cCCHHHHhcCCCEE
Confidence 37999999 999999999998765 1566655444422110 0000 113432 46889999999999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCc-EEEEeccchhhhhhccccCCCCCCcEEEeccCCchhhHH--HHHhhccccc--CC
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVR--RLYVQGKEIN--GA 257 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~Ga-iL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr--~ly~~G~e~~--G~ 257 (417)
|-+++|....+.+..... .|. +|+=..|++-..++. ....-+.+. +...||..--+.- .+-+.-.... ++
T Consensus 78 IDfT~p~a~~~~~~~al~---~G~~vVigTTG~s~~~~~~-L~~aa~~~~-vv~a~N~s~Gv~l~~~~~~~aa~~l~~~~ 152 (272)
T 4f3y_A 78 IDFTLPEGTLVHLDAALR---HDVKLVIGTTGFSEPQKAQ-LRAAGEKIA-LVFSANMSVGVNVTMKLLEFAAKQFAQGY 152 (272)
T ss_dssp EECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHHHH-HHHHTTTSE-EEECSCCCHHHHHHHHHHHHHHHHTSSSC
T ss_pred EEcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHHHH-HHHHhccCC-EEEECCCCHHHHHHHHHHHHHHHhcCcCC
Confidence 999999988877766543 344 444456876432211 001123444 5788987654410 0000000000 12
Q ss_pred CceEEEeecC----C-CCHHHHHHHHHHHHHhCC
Q 014863 258 GINSSFAVHQ----D-VDGRATNVALGWSVALGS 286 (417)
Q Consensus 258 Gv~~liav~q----d-~sgea~e~a~al~~aiG~ 286 (417)
-+- ++-.|. | +||.++.+++.+....|.
T Consensus 153 die-i~E~HH~~K~DaPSGTA~~la~~i~~~~~~ 185 (272)
T 4f3y_A 153 DIE-IIEAHHRHKVDAPSGTALMMGETIAAATGR 185 (272)
T ss_dssp EEE-EEEEECTTCCSSSCHHHHHHHHHHHHTTTC
T ss_pred CEE-EEEecCCCCCCCCCHHHHHHHHHHHHHhCc
Confidence 233 233444 2 589999999999988875
No 268
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.00 E-value=0.0012 Score=65.58 Aligned_cols=96 Identities=15% Similarity=0.195 Sum_probs=59.8
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCC-chhHHHHHHcCceec-----------CC--Cc-CCHHhh
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEE-----------NG--TL-GDIYET 175 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-~~s~~~A~~~G~~~~-----------d~--~~-~~~~Ea 175 (417)
|.||||+|+|.+|..+++.|.+. .+++++...+.. ..+...+...|+..- +. .+ .+.++.
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-----~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~ 75 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-----DDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM 75 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-----SSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-----CCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHH
Confidence 46899999999999999999764 145654433332 223333443321100 00 01 245666
Q ss_pred hccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccc
Q 014863 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 176 v~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G~ 214 (417)
..++|+|+.|+|.....+..+... +.|+.|++.++-
T Consensus 76 ~~~vDvV~~atp~~~~~~~a~~~l---~aG~~VId~sp~ 111 (337)
T 1cf2_P 76 LDEADIVIDCTPEGIGAKNLKMYK---EKGIKAIFQGGE 111 (337)
T ss_dssp HHTCSEEEECCSTTHHHHHHHHHH---HHTCCEEECTTS
T ss_pred hcCCCEEEECCCchhhHHHHHHHH---HcCCEEEEecCC
Confidence 789999999999998887776543 345556666553
No 269
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.00 E-value=0.0011 Score=68.63 Aligned_cols=73 Identities=18% Similarity=0.191 Sum_probs=48.2
Q ss_pred CEEEEEcccch--HHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc---------CceecCCCcCCHHhhhccCC
Q 014863 112 NQIGVIGWGSQ--GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---------GFTEENGTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~m--G~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~---------G~~~~d~~~~~~~Eav~~AD 180 (417)
+||+|||.|+| |.+++..|...- .-.| +|++.+.. ....+..... -+.. +.|.++++++||
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~--~~~g-eV~L~Di~-~e~le~~~~~~~~l~~~~~~I~~----TtD~~eAl~dAD 77 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDE--RMSG-TVALYDLD-FEAAQKNEVIGNHSGNGRWRYEA----VSTLKKALSAAD 77 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCS--SCCE-EEEEECSS-HHHHHHHHHHHTTSTTSCEEEEE----ESSHHHHHTTCS
T ss_pred CEEEEECCChhHhHHHHHHHHHhcc--ccCC-eEEEEeCC-HHHHHHHHHHHHHHhccCCeEEE----ECCHHHHhcCCC
Confidence 69999999998 578888887630 0015 77766554 3322222211 1222 468899999999
Q ss_pred eEEEeecchhHH
Q 014863 181 LVLLLISDAAQA 192 (417)
Q Consensus 181 iViLavpd~a~~ 192 (417)
+||+++++....
T Consensus 78 fVI~airvG~~~ 89 (450)
T 3fef_A 78 IVIISILPGSLD 89 (450)
T ss_dssp EEEECCCSSCHH
T ss_pred EEEeccccCCcc
Confidence 999999876443
No 270
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.95 E-value=0.0024 Score=62.83 Aligned_cols=68 Identities=16% Similarity=0.184 Sum_probs=45.4
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHH--cC------ceecCCCcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~d~~~~~~~Eav~~ADi 181 (417)
+||+|||.|++|.+++..|... ++ ++++.+....+....+.+ .. +.. ..+..+++++||+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v----~~~~~~a~~~aDv 75 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ------GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKI----YSGEYSDCKDADL 75 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEE----EECCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEE----EECCHHHhCCCCE
Confidence 6999999999999999999887 65 666655532222222222 11 111 1244678999999
Q ss_pred EEEeecch
Q 014863 182 VLLLISDA 189 (417)
Q Consensus 182 ViLavpd~ 189 (417)
||++.+..
T Consensus 76 Vii~ag~~ 83 (318)
T 1ez4_A 76 VVITAGAP 83 (318)
T ss_dssp EEECCCC-
T ss_pred EEECCCCC
Confidence 99998643
No 271
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.95 E-value=0.0025 Score=62.97 Aligned_cols=68 Identities=15% Similarity=0.148 Sum_probs=45.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHH--cC------ceecCCCcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~d~~~~~~~Eav~~ADi 181 (417)
+||+|||.|++|.+++..|... ++ ++++.+....+....+.+ .. +.. ..+..+++++||+
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~------~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i----~~~~~~a~~~aDv 79 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKI----YSAEYSDAKDADL 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEE----EECCGGGGGGCSE
T ss_pred CEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEE----EECCHHHhCCCCE
Confidence 7999999999999999999887 65 666655532222222222 22 111 1245678999999
Q ss_pred EEEeecch
Q 014863 182 VLLLISDA 189 (417)
Q Consensus 182 ViLavpd~ 189 (417)
||++.+..
T Consensus 80 Vii~ag~~ 87 (326)
T 2zqz_A 80 VVITAGAP 87 (326)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 99998643
No 272
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.95 E-value=0.0041 Score=61.88 Aligned_cols=95 Identities=16% Similarity=0.149 Sum_probs=60.1
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCC-chhHHHHHHcCceecCC-------------CcCCHHhhh
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENG-------------TLGDIYETI 176 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-~~s~~~A~~~G~~~~d~-------------~~~~~~Eav 176 (417)
|.||||+|+|.||..+++.|.+. .+++++...+.. ......+...|+..... ...+.+++.
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~-----p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~ 75 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQ-----PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI 75 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH
T ss_pred CeEEEEEecCHHHHHHHHHHHcC-----CCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhh
Confidence 35899999999999999999765 145654444432 33345555556542100 011334555
Q ss_pred ccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 177 ~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
+++|+|+.|+|.....+..+... +.|..+++.++
T Consensus 76 ~~vDvV~~aTp~~~s~~~a~~~~---~aG~kvV~~sa 109 (340)
T 1b7g_O 76 KTSDIVVDTTPNGVGAQYKPIYL---QLQRNAIFQGG 109 (340)
T ss_dssp HHCSEEEECCSTTHHHHHHHHHH---HTTCEEEECTT
T ss_pred cCCCEEEECCCCchhHHHHHHHH---HcCCeEEEeCC
Confidence 68999999999998887775443 34655555443
No 273
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.90 E-value=0.0012 Score=63.73 Aligned_cols=70 Identities=16% Similarity=0.176 Sum_probs=54.2
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeec
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavp 187 (417)
.+ ++|.|||.|-+|.+++..|.+. |. +|.|.+|+.++..+.+.+.+... ..+.. +.++|+||.+||
T Consensus 118 ~~-~~vlvlGaGgaarav~~~L~~~------G~~~i~v~nRt~~ka~~la~~~~~~~----~~~~~--~~~~DivInaTp 184 (271)
T 1npy_A 118 KN-AKVIVHGSGGMAKAVVAAFKNS------GFEKLKIYARNVKTGQYLAALYGYAY----INSLE--NQQADILVNVTS 184 (271)
T ss_dssp TT-SCEEEECSSTTHHHHHHHHHHT------TCCCEEEECSCHHHHHHHHHHHTCEE----ESCCT--TCCCSEEEECSS
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHcCCcc----chhhh--cccCCEEEECCC
Confidence 46 8999999999999999999998 87 78899988666666776666432 11222 468999999999
Q ss_pred chhH
Q 014863 188 DAAQ 191 (417)
Q Consensus 188 d~a~ 191 (417)
....
T Consensus 185 ~gm~ 188 (271)
T 1npy_A 185 IGMK 188 (271)
T ss_dssp TTCT
T ss_pred CCcc
Confidence 7653
No 274
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.89 E-value=0.0011 Score=65.28 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=59.2
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHH--hhhccCCeE
Q 014863 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY--ETISGSDLV 182 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~--Eav~~ADiV 182 (417)
..++| +++.|||.|. +|.++|+.|... |..|.+..+.. .+++ +.+++||+|
T Consensus 161 i~l~G-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~~~~T-------------------~~l~l~~~~~~ADIV 214 (300)
T 4a26_A 161 IEMAG-KRAVVLGRSNIVGAPVAALLMKE------NATVTIVHSGT-------------------STEDMIDYLRTADIV 214 (300)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTTS-------------------CHHHHHHHHHTCSEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHHC------CCeEEEEeCCC-------------------CCchhhhhhccCCEE
Confidence 46899 9999999887 799999999998 98888876531 1344 789999999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|.+++-.. ++. ..++|+|++|++++
T Consensus 215 I~Avg~p~---~I~--~~~vk~GavVIDvg 239 (300)
T 4a26_A 215 IAAMGQPG---YVK--GEWIKEGAAVVDVG 239 (300)
T ss_dssp EECSCCTT---CBC--GGGSCTTCEEEECC
T ss_pred EECCCCCC---CCc--HHhcCCCcEEEEEe
Confidence 99999532 222 24579999998775
No 275
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.89 E-value=0.0017 Score=63.54 Aligned_cols=76 Identities=14% Similarity=0.131 Sum_probs=59.8
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 014863 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViL 184 (417)
-.++| +++.|||.|. .|..+|+.|... |..|.+..+. ..++++.+++||+||.
T Consensus 157 i~l~G-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 210 (285)
T 3l07_A 157 IKTEG-AYAVVVGASNVVGKPVSQLLLNA------KATVTTCHRF-------------------TTDLKSHTTKADILIV 210 (285)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHhcccCCEEEE
Confidence 46899 9999999987 699999999998 8888776542 1367889999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+++-.. ++. ..++|+|++|++++
T Consensus 211 Avg~p~---~I~--~~~vk~GavVIDvg 233 (285)
T 3l07_A 211 AVGKPN---FIT--ADMVKEGAVVIDVG 233 (285)
T ss_dssp CCCCTT---CBC--GGGSCTTCEEEECC
T ss_pred CCCCCC---CCC--HHHcCCCcEEEEec
Confidence 998422 222 24579999998775
No 276
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.86 E-value=0.0018 Score=63.39 Aligned_cols=76 Identities=18% Similarity=0.132 Sum_probs=60.0
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 014863 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViL 184 (417)
..++| +++.|||.|. .|..+|+.|... |..|.+..+. ..++++.+++||+||.
T Consensus 156 i~l~G-k~vvVvGrs~iVG~p~A~lL~~~------gAtVtv~h~~-------------------t~~L~~~~~~ADIVI~ 209 (285)
T 3p2o_A 156 IDLEG-KDAVIIGASNIVGRPMATMLLNA------GATVSVCHIK-------------------TKDLSLYTRQADLIIV 209 (285)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHHhhcCCEEEE
Confidence 46899 9999999987 699999999998 8888876542 1367889999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+++-.. ++. ..++|+|++|++++
T Consensus 210 Avg~p~---~I~--~~~vk~GavVIDVg 232 (285)
T 3p2o_A 210 AAGCVN---LLR--SDMVKEGVIVVDVG 232 (285)
T ss_dssp CSSCTT---CBC--GGGSCTTEEEEECC
T ss_pred CCCCCC---cCC--HHHcCCCeEEEEec
Confidence 998422 222 24579999998875
No 277
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.84 E-value=0.0023 Score=63.50 Aligned_cols=98 Identities=15% Similarity=0.160 Sum_probs=57.6
Q ss_pred CCCEEEEEcccchHHHHHHHHHhh---hhhhcCCceEEEEecCCchh-----HH--HHHHcC-ceecCCCcC--CHHhhh
Q 014863 110 GINQIGVIGWGSQGPAQAQNLRDS---LAEAKSDIVVKVGLRKGSRS-----FA--EARAAG-FTEENGTLG--DIYETI 176 (417)
Q Consensus 110 g~kkIgIIG~G~mG~AiA~~Lr~s---~~~~~~G~~Vivg~r~~~~s-----~~--~A~~~G-~~~~d~~~~--~~~Eav 176 (417)
||.||+|||+|.+|..+++.|.+. +...|.+++++...+.+... .. .+...+ ... .. +.++++
T Consensus 1 ~mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~----~~~~d~~~ll 76 (327)
T 3do5_A 1 GMIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGML----RDDAKAIEVV 76 (327)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSC----SBCCCHHHHH
T ss_pred CcEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccc----cCCCCHHHHh
Confidence 367999999999999999999764 11222366654443332111 11 111111 111 23 788887
Q ss_pred c--cCCeEEEeecchhH-HHHHHHHHhcCCCCcEEEEe
Q 014863 177 S--GSDLVLLLISDAAQ-ADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 177 ~--~ADiViLavpd~a~-~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+ +.|+|+.++|+..+ .+.++-+...|+.|+.|+..
T Consensus 77 ~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~ 114 (327)
T 3do5_A 77 RSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTS 114 (327)
T ss_dssp HHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEEC
T ss_pred cCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEec
Confidence 5 58999999999876 22333345567788876644
No 278
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.79 E-value=0.0039 Score=61.84 Aligned_cols=66 Identities=15% Similarity=0.153 Sum_probs=45.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHH--cC------ceecCCCcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~d~~~~~~~Eav~~ADi 181 (417)
+||+|||.|.+|.++|..|... |+ ++++.+....+....+.+ .. ... ..+..+++++||+
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i----~~~~~~a~~~aDi 79 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKI----YSAEYSDAKDADL 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEE----EECCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEE----EECcHHHhcCCCE
Confidence 8999999999999999999988 76 666655543222222211 11 111 2234578999999
Q ss_pred EEEeec
Q 014863 182 VLLLIS 187 (417)
Q Consensus 182 ViLavp 187 (417)
||++..
T Consensus 80 Vvi~ag 85 (326)
T 3vku_A 80 VVITAG 85 (326)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999875
No 279
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.78 E-value=0.0027 Score=65.88 Aligned_cols=97 Identities=18% Similarity=0.208 Sum_probs=60.3
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcC---CHHhhhccCCeE
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG---DIYETISGSDLV 182 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~---~~~Eav~~ADiV 182 (417)
..+++ ++|.|||.|.+|.+++..|.+. .|.+|.+.+|+.++..+.+...++......+. +..++++++|+|
T Consensus 19 ~~l~~-k~VlIiGAGgiG~aia~~L~~~-----~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvV 92 (467)
T 2axq_A 19 GRHMG-KNVLLLGSGFVAQPVIDTLAAN-----DDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVV 92 (467)
T ss_dssp ----C-EEEEEECCSTTHHHHHHHHHTS-----TTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred cCCCC-CEEEEECChHHHHHHHHHHHhC-----CCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEE
Confidence 45666 8999999999999999999875 04688888887544444443334321000122 345677899999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
|.++|+..+..+.... +++|..+.+.
T Consensus 93 In~tp~~~~~~v~~a~---l~~g~~vvd~ 118 (467)
T 2axq_A 93 ISLIPYTFHPNVVKSA---IRTKTDVVTS 118 (467)
T ss_dssp EECSCGGGHHHHHHHH---HHHTCEEEEC
T ss_pred EECCchhhhHHHHHHH---HhcCCEEEEe
Confidence 9999988665554332 2344544444
No 280
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.76 E-value=0.0024 Score=62.59 Aligned_cols=67 Identities=21% Similarity=0.171 Sum_probs=44.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHH--cC------ceecCCCcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G------~~~~d~~~~~~~Eav~~ADi 181 (417)
+||+|||.|++|.+++..|... ++ ++++.+....+....+.+ .. .... . +..+++++||+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~---~-~~~~a~~~aD~ 70 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL------GVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW---A-GSYGDLEGARA 70 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE---E-CCGGGGTTEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE---E-CCHHHhCCCCE
Confidence 6899999999999999999887 53 566655543222222322 11 1110 2 33678999999
Q ss_pred EEEeecc
Q 014863 182 VLLLISD 188 (417)
Q Consensus 182 ViLavpd 188 (417)
||++.+.
T Consensus 71 Vii~ag~ 77 (310)
T 2xxj_A 71 VVLAAGV 77 (310)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998863
No 281
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.76 E-value=0.0026 Score=62.79 Aligned_cols=66 Identities=20% Similarity=0.172 Sum_probs=44.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCC--chhHHHHHH----c-----CceecCCCcCCHHhhhccC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG--SRSFAEARA----A-----GFTEENGTLGDIYETISGS 179 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~--~~s~~~A~~----~-----G~~~~d~~~~~~~Eav~~A 179 (417)
+||+|||.|.||.++|..|... |+ +|++.++.. ......+.+ . .... ...+..+++++|
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~------g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i---~~t~d~~a~~~a 79 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK------ELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANI---IGTSDYADTADS 79 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCE---EEESCGGGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEE---EEcCCHHHhCCC
Confidence 7999999999999999999998 88 877766652 111111111 0 1111 012235789999
Q ss_pred CeEEEee
Q 014863 180 DLVLLLI 186 (417)
Q Consensus 180 DiViLav 186 (417)
|+||++.
T Consensus 80 DvVIiaa 86 (315)
T 3tl2_A 80 DVVVITA 86 (315)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 9999997
No 282
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.76 E-value=0.0026 Score=65.47 Aligned_cols=78 Identities=21% Similarity=0.150 Sum_probs=51.7
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcC-ceecCCCcC---CHHhhhccCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLG---DIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G-~~~~d~~~~---~~~Eav~~ADiViLavp 187 (417)
++|.|+|.|.+|.+++..|.+. |.+|++.+|..++..+.+...+ +......+. +..++++++|+|+.++|
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~------G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~ 77 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDS------GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP 77 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTT------TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------cCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence 8999999999999999999988 8888888776433322222222 211000122 34467889999999999
Q ss_pred chhHHHHH
Q 014863 188 DAAQADNY 195 (417)
Q Consensus 188 d~a~~~Vl 195 (417)
...+..+.
T Consensus 78 ~~~~~~i~ 85 (450)
T 1ff9_A 78 YTFHATVI 85 (450)
T ss_dssp --CHHHHH
T ss_pred cccchHHH
Confidence 87665543
No 283
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.75 E-value=0.0023 Score=64.74 Aligned_cols=81 Identities=15% Similarity=0.128 Sum_probs=55.0
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCC---ceEEEEecCCchhHHHHHHcC------ceecCCCcC---CHHhhhcc
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD---IVVKVGLRKGSRSFAEARAAG------FTEENGTLG---DIYETISG 178 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G---~~Vivg~r~~~~s~~~A~~~G------~~~~d~~~~---~~~Eav~~ 178 (417)
|+||+|||.|.+|.++++.|.+. | .+|++..|+.++..+.+.+.+ +......+. +.++++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~------g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~ 74 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN------REVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE 74 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC------TTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh
Confidence 68999999999999999999987 7 278888776554444443321 211000022 34566777
Q ss_pred --CCeEEEeecchhHHHHHHH
Q 014863 179 --SDLVLLLISDAAQADNYEK 197 (417)
Q Consensus 179 --ADiViLavpd~a~~~Vl~e 197 (417)
+|+||.++|+.....+.+.
T Consensus 75 ~~~DvVin~ag~~~~~~v~~a 95 (405)
T 4ina_A 75 VKPQIVLNIALPYQDLTIMEA 95 (405)
T ss_dssp HCCSEEEECSCGGGHHHHHHH
T ss_pred hCCCEEEECCCcccChHHHHH
Confidence 8999999999877666654
No 284
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.74 E-value=0.0025 Score=62.39 Aligned_cols=76 Identities=21% Similarity=0.171 Sum_probs=59.6
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 014863 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViL 184 (417)
-.++| +++.|||.|. .|.++|+-|... |..|.+..+. ..++++.+++||+||.
T Consensus 157 i~l~G-k~vvVvGrs~iVG~plA~lL~~~------gAtVtv~hs~-------------------T~~L~~~~~~ADIVI~ 210 (286)
T 4a5o_A 157 ADLYG-MDAVVVGASNIVGRPMALELLLG------GCTVTVTHRF-------------------TRDLADHVSRADLVVV 210 (286)
T ss_dssp CCCTT-CEEEEECTTSTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHHTCSEEEE
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHC------CCeEEEEeCC-------------------CcCHHHHhccCCEEEE
Confidence 45889 9999999886 799999999988 8888876532 1367788999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+++-.. ++. ..++|+|++|++++
T Consensus 211 Avg~p~---~I~--~~~vk~GavVIDvg 233 (286)
T 4a5o_A 211 AAGKPG---LVK--GEWIKEGAIVIDVG 233 (286)
T ss_dssp CCCCTT---CBC--GGGSCTTCEEEECC
T ss_pred CCCCCC---CCC--HHHcCCCeEEEEec
Confidence 998422 222 24579999998875
No 285
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.74 E-value=0.0074 Score=60.22 Aligned_cols=92 Identities=21% Similarity=0.142 Sum_probs=58.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchh-HHHHH--------------------HcCceecCCCcC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEAR--------------------AAGFTEENGTLG 170 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s-~~~A~--------------------~~G~~~~d~~~~ 170 (417)
.||||+|+|.+|..+++.|... .+++++...+..... ...++ ..++.. ..
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~-----~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v----~~ 73 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQ-----DDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPV----EG 73 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-----SSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCC----CC
T ss_pred eEEEEECCCHHHHHHHHHHHhC-----CCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEE----CC
Confidence 5999999999999999998765 135654433322111 11111 222222 12
Q ss_pred CHHhhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccc
Q 014863 171 DIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 171 ~~~Eav~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G~ 214 (417)
+.++...++|+|+.|+|.....+..+ ..+++.|+.|+++++.
T Consensus 74 ~~~~~~~~vDiV~eatg~~~s~~~a~--~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 74 TILDIIEDADIVVDGAPKKIGKQNLE--NIYKPHKVKAILQGGE 115 (343)
T ss_dssp BGGGTGGGCSEEEECCCTTHHHHHHH--HTTTTTTCEEEECTTS
T ss_pred chHHhccCCCEEEECCCccccHHHHH--HHHHHCCCEEEECCCc
Confidence 34455578999999999877666554 4678889877776653
No 286
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=96.71 E-value=0.0064 Score=59.58 Aligned_cols=68 Identities=18% Similarity=0.174 Sum_probs=45.1
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCC--ceEEEEecCCchhHHHHHH--cCcee--cCCC--cCCHHhhhccCCeE
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARA--AGFTE--ENGT--LGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G--~~Vivg~r~~~~s~~~A~~--~G~~~--~d~~--~~~~~Eav~~ADiV 182 (417)
+||+|||. |.+|.+++..|... | .++++.+... ....+.+ .+... .... ..+.++++++||+|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~------~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvV 72 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS------PLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVV 72 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC------TTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEE
Confidence 58999998 99999999999877 6 4666666543 2222222 22110 0000 13577899999999
Q ss_pred EEeec
Q 014863 183 LLLIS 187 (417)
Q Consensus 183 iLavp 187 (417)
|++..
T Consensus 73 vi~ag 77 (314)
T 1mld_A 73 VIPAG 77 (314)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 99874
No 287
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.70 E-value=0.003 Score=62.43 Aligned_cols=97 Identities=11% Similarity=0.063 Sum_probs=61.7
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecC---CchhHHHHHHc----CceecCCCcCC---HHhh
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK---GSRSFAEARAA----GFTEENGTLGD---IYET 175 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~---~~~s~~~A~~~----G~~~~d~~~~~---~~Ea 175 (417)
.++| +++.|+|.|-+|.+++..|.+. |. +|.+.+|+ .++..+.+.+. +....-....+ ..+.
T Consensus 151 ~l~g-k~~lVlGaGG~g~aia~~L~~~------Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (315)
T 3tnl_A 151 DIIG-KKMTICGAGGAATAICIQAALD------GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKE 223 (315)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred CccC-CEEEEECCChHHHHHHHHHHHC------CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhh
Confidence 4678 9999999999999999999998 98 88888887 34433443332 21110000222 3456
Q ss_pred hccCCeEEEeecchhHHH----HHHHHHhcCCCCcEEEEe
Q 014863 176 ISGSDLVLLLISDAAQAD----NYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 176 v~~ADiViLavpd~a~~~----Vl~eI~p~Lk~GaiL~~a 211 (417)
+.++|+||.+||...... .+. ....++++.+|.|.
T Consensus 224 l~~aDiIINaTp~Gm~~~~~~~p~~-~~~~l~~~~~V~Dl 262 (315)
T 3tnl_A 224 IAESVIFTNATGVGMKPFEGETLLP-SADMLRPELIVSDV 262 (315)
T ss_dssp HHTCSEEEECSSTTSTTSTTCCSCC-CGGGCCTTCEEEES
T ss_pred hcCCCEEEECccCCCCCCCCCCCCC-cHHHcCCCCEEEEe
Confidence 789999999999654321 010 12235666666644
No 288
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.68 E-value=0.0026 Score=62.83 Aligned_cols=77 Identities=18% Similarity=0.164 Sum_probs=54.3
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecC---CchhHHHHHHc----CceecCCCcCCH---Hhh
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK---GSRSFAEARAA----GFTEENGTLGDI---YET 175 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~---~~~s~~~A~~~----G~~~~d~~~~~~---~Ea 175 (417)
.++| +++.|+|.|-+|.+++..|.+. |. +|.+.+|+ .++..+.+.+. +....-....+. .+.
T Consensus 145 ~l~g-k~~lVlGAGGaaraia~~L~~~------G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~ 217 (312)
T 3t4e_A 145 DMRG-KTMVLLGAGGAATAIGAQAAIE------GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEA 217 (312)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred CcCC-CEEEEECcCHHHHHHHHHHHHc------CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhh
Confidence 4678 9999999999999999999998 98 78888887 34444444332 221100002233 566
Q ss_pred hccCCeEEEeecchh
Q 014863 176 ISGSDLVLLLISDAA 190 (417)
Q Consensus 176 v~~ADiViLavpd~a 190 (417)
+.++|+||.+||...
T Consensus 218 l~~~DiIINaTp~Gm 232 (312)
T 3t4e_A 218 LASADILTNGTKVGM 232 (312)
T ss_dssp HHHCSEEEECSSTTS
T ss_pred ccCceEEEECCcCCC
Confidence 889999999999764
No 289
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.61 E-value=0.0031 Score=61.83 Aligned_cols=76 Identities=16% Similarity=0.104 Sum_probs=59.5
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 014863 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViL 184 (417)
..++| +++.|||.|. .|..+|+-|... |..|.+..+. ..++.+.+++||+||.
T Consensus 155 i~l~g-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 208 (288)
T 1b0a_A 155 IDTFG-LNAVVIGASNIVGRPMSMELLLA------GCTTTVTHRF-------------------TKNLRHHVENADLLIV 208 (288)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHTT------TCEEEEECSS-------------------CSCHHHHHHHCSEEEE
T ss_pred CCCCC-CEEEEECCChHHHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHHhccCCEEEE
Confidence 46889 9999999997 599999999988 8888876432 2367889999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+++.... +. ..++|+|++|+|++
T Consensus 209 Avg~p~l---I~--~~~vk~GavVIDVg 231 (288)
T 1b0a_A 209 AVGKPGF---IP--GDWIKEGAIVIDVG 231 (288)
T ss_dssp CSCCTTC---BC--TTTSCTTCEEEECC
T ss_pred CCCCcCc---CC--HHHcCCCcEEEEcc
Confidence 9994431 21 13468999998876
No 290
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.56 E-value=0.00074 Score=63.13 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=54.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc-cCCeEEEeecchh
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLISDAA 190 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~-~ADiViLavpd~a 190 (417)
++|+|||+|++|.++++.+... . |++++...+.+...... ...|+... ...++++.++ +.|+|++|+|...
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~----~-g~~iVg~~D~dp~k~g~-~i~gv~V~--~~~dl~ell~~~ID~ViIA~Ps~~ 152 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFG----E-SFELRGFFDVDPEKVGR-PVRGGVIE--HVDLLPQRVPGRIEIALLTVPREA 152 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCC----S-SEEEEEEEESCTTTTTC-EETTEEEE--EGGGHHHHSTTTCCEEEECSCHHH
T ss_pred CEEEEECccHHHHHHHHhHhhc----C-CcEEEEEEeCCHHHHhh-hhcCCeee--cHHhHHHHHHcCCCEEEEeCCchh
Confidence 6899999999999999863322 2 67766666554432211 11243321 1456777776 5899999999998
Q ss_pred HHHHHHHHHh
Q 014863 191 QADNYEKIFS 200 (417)
Q Consensus 191 ~~~Vl~eI~p 200 (417)
+.++.+.+..
T Consensus 153 ~~ei~~~l~~ 162 (211)
T 2dt5_A 153 AQKAADLLVA 162 (211)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888876654
No 291
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.56 E-value=0.0057 Score=63.31 Aligned_cols=86 Identities=20% Similarity=0.189 Sum_probs=56.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCC-chhHHHHHHc-C----------------------ceecCC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAA-G----------------------FTEENG 167 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-~~s~~~A~~~-G----------------------~~~~d~ 167 (417)
.||||||+|.||..++..+... .+++++...+.+ ++..+.+.+. | ...
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~-----~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v--- 95 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARM-----QGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAV--- 95 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-----SSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEE---
T ss_pred eEEEEECChHHHHHHHHHHhhC-----CCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceE---
Confidence 5899999999999999888654 156654444443 3333333333 5 111
Q ss_pred CcCCHHhhhc--cCCeEEEeecch-hHHHHHHHHHhcCCCCcEEE
Q 014863 168 TLGDIYETIS--GSDLVLLLISDA-AQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 168 ~~~~~~Eav~--~ADiViLavpd~-a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+.|.+++++ +.|+|+++||+. .+.++... .|+.|+.|+
T Consensus 96 -~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~~---AL~AGKHVv 136 (446)
T 3upl_A 96 -TDDNDLILSNPLIDVIIDATGIPEVGAETGIA---AIRNGKHLV 136 (446)
T ss_dssp -ESCHHHHHTCTTCCEEEECSCCHHHHHHHHHH---HHHTTCEEE
T ss_pred -ECCHHHHhcCCCCCEEEEcCCChHHHHHHHHH---HHHcCCcEE
Confidence 468889886 589999999864 44554433 345677665
No 292
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.55 E-value=0.0048 Score=60.83 Aligned_cols=76 Identities=16% Similarity=0.179 Sum_probs=59.9
Q ss_pred cccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 014863 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViL 184 (417)
-.++| +++.|||.|+ .|..+|+-|... |..|.+..+. ..++.+.+++||+||.
T Consensus 161 i~l~g-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 214 (301)
T 1a4i_A 161 VPIAG-RHAVVVGRSKIVGAPMHDLLLWN------NATVTTCHSK-------------------TAHLDEEVNKGDILVV 214 (301)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHhC------CCeEEEEECC-------------------cccHHHHhccCCEEEE
Confidence 36889 9999999996 699999999988 8888776422 2368889999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+++.... +. ..++|+|++|+|++
T Consensus 215 Avg~p~~---I~--~~~vk~GavVIDVg 237 (301)
T 1a4i_A 215 ATGQPEM---VK--GEWIKPGAIVIDCG 237 (301)
T ss_dssp CCCCTTC---BC--GGGSCTTCEEEECC
T ss_pred CCCCccc---CC--HHHcCCCcEEEEcc
Confidence 9996432 21 23468999999876
No 293
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=96.53 E-value=0.0062 Score=60.53 Aligned_cols=72 Identities=22% Similarity=0.224 Sum_probs=45.6
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHH--cC--ceecC--CCcCCHHhhhccC
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG--FTEEN--GTLGDIYETISGS 179 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~--~G--~~~~d--~~~~~~~Eav~~A 179 (417)
... +||+|||.|.||.++|..|... |+ ++++.+....+....+.+ +. +.... ....++ +++++|
T Consensus 17 ~~~-~kV~ViGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~a 88 (331)
T 4aj2_A 17 VPQ-NKITVVGVGAVGMACAISILMK------DLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANS 88 (331)
T ss_dssp CCS-SEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCC
Confidence 444 8999999999999999999887 76 676665543322222221 11 11000 012345 468999
Q ss_pred CeEEEeec
Q 014863 180 DLVLLLIS 187 (417)
Q Consensus 180 DiViLavp 187 (417)
|+||++.-
T Consensus 89 DiVvi~aG 96 (331)
T 4aj2_A 89 KLVIITAG 96 (331)
T ss_dssp EEEEECCS
T ss_pred CEEEEccC
Confidence 99999863
No 294
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.50 E-value=0.0043 Score=59.90 Aligned_cols=160 Identities=14% Similarity=0.123 Sum_probs=89.0
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhH---HHHHH-----cCceecCCCcCCHHhhhccCCeE
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEARA-----AGFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~---~~A~~-----~G~~~~d~~~~~~~Eav~~ADiV 182 (417)
+||+|+|+ |.||..+++.+... .+++++...+.+.... +.... .|+.. ..+.++++.++|+|
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~-----~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~----~~dl~~~l~~~DvV 76 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALAL-----EGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV----QSSLDAVKDDFDVF 76 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-----TTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE----ESCSTTTTTSCSEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCchhhhhhhHHHHcCCCcCCcee----cCCHHHHhcCCCEE
Confidence 68999999 99999999988754 1666654444322110 11111 12222 34677888899999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEE-eccchhhhhhccccCCCCCCcEEEeccCCchhhH--HHHHhhccccc--CC
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNSILGL-SHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV--RRLYVQGKEIN--GA 257 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~GaiL~~-a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~v--r~ly~~G~e~~--G~ 257 (417)
|-+++|..+.+++..... .|.-+++ ..|++....+. ....-+.+. +...||..--.. -++.+.--... ++
T Consensus 77 IDft~p~~~~~~~~~a~~---~G~~vVigTtG~~~e~~~~-L~~~a~~~~-vv~a~N~siGvn~~~~l~~~aa~~~~~~~ 151 (273)
T 1dih_A 77 IDFTRPEGTLNHLAFCRQ---HGKGMVIGTTGFDEAGKQA-IRDAAADIA-IVFAANFSVGVNVMLKLLEKAAKVMGDYT 151 (273)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCEEEECCCCCCHHHHHH-HHHHTTTSC-EEECSCCCHHHHHHHHHHHHHHHHHTTTS
T ss_pred EEcCChHHHHHHHHHHHh---CCCCEEEECCCCCHHHHHH-HHHhcCCCC-EEEEecCcHHHHHHHHHHHHHHHhcCCCC
Confidence 988888877776665443 4544443 55876432211 001123444 567888654331 01111000000 12
Q ss_pred CceEEEeecC----C-CCHHHHHHHHHHHHHhCC
Q 014863 258 GINSSFAVHQ----D-VDGRATNVALGWSVALGS 286 (417)
Q Consensus 258 Gv~~liav~q----d-~sgea~e~a~al~~aiG~ 286 (417)
-+- ++-.|. | +||.++.+++.+....|.
T Consensus 152 die-iiE~Hh~~K~DaPSGTA~~~ae~i~~~~~~ 184 (273)
T 1dih_A 152 DIE-IIEAHHRHKVDAPSGTALAMGEAIAHALDK 184 (273)
T ss_dssp EEE-EEEEECTTCCSSSCHHHHHHHHHHHHHTTC
T ss_pred CEE-EEEeecCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 222 233333 3 689999999999988875
No 295
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.49 E-value=0.0072 Score=57.21 Aligned_cols=87 Identities=18% Similarity=0.210 Sum_probs=57.2
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCC-------------------chhHHHHHHc----
Q 014863 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFAEARAA---- 160 (417)
Q Consensus 105 ~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~-------------------~~s~~~A~~~---- 160 (417)
.+.|++ ++|.|||+|.+|..++++|... |+ ++.+.++.. .+....+...
T Consensus 26 q~~l~~-~~VlVvG~Gg~G~~va~~La~~------Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n 98 (249)
T 1jw9_B 26 QEALKD-SRVLIVGLGGLGCAASQYLASA------GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN 98 (249)
T ss_dssp HHHHHH-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred HHHHhC-CeEEEEeeCHHHHHHHHHHHHc------CCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC
Confidence 467888 9999999999999999999999 87 666666543 2332222221
Q ss_pred -Cceec--CCCcC--CHHhhhccCCeEEEeecchhHHHHHHHH
Q 014863 161 -GFTEE--NGTLG--DIYETISGSDLVLLLISDAAQADNYEKI 198 (417)
Q Consensus 161 -G~~~~--d~~~~--~~~Eav~~ADiViLavpd~a~~~Vl~eI 198 (417)
++... ...+. +.++.++++|+||.++++......+.+.
T Consensus 99 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~ 141 (249)
T 1jw9_B 99 PHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAG 141 (249)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHH
T ss_pred CCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHH
Confidence 22110 11111 2346788999999999876665555543
No 296
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.47 E-value=0.0033 Score=61.54 Aligned_cols=160 Identities=15% Similarity=0.060 Sum_probs=93.8
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchh---HHHHH-----HcCceecCCCcCCHHhhhccCCeE
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS---FAEAR-----AAGFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s---~~~A~-----~~G~~~~d~~~~~~~Eav~~ADiV 182 (417)
.||+|+| +|.||..+++.+.+. .+++++...+..... .+... ..|+.. ..++++++.++|+|
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~-----~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v----~~dl~~ll~~aDVv 92 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRR-----KDVELCAVLVRKGSSFVDKDASILIGSDFLGVRI----TDDPESAFSNTEGI 92 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTC-----SSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBC----BSCHHHHTTSCSEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCCccccccchHHhhccCcCCcee----eCCHHHHhcCCCEE
Confidence 6899999 999999999998765 166765555542211 00111 234443 56899999999999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCc-EEEEeccchhhhhhccccCCCCCCcEEEeccCCchhhHH--HHHhhccccc--CC
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVR--RLYVQGKEIN--GA 257 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~Ga-iL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~vr--~ly~~G~e~~--G~ 257 (417)
|-.++|....+.+..... .|. +|+=+.|++-...+. ....-+.+. +...||..--+.- .+-+.--... ++
T Consensus 93 IDFT~p~a~~~~~~~~l~---~Gv~vViGTTG~~~e~~~~-L~~aa~~~~-~~~a~N~SiGv~ll~~l~~~aa~~l~~~~ 167 (288)
T 3ijp_A 93 LDFSQPQASVLYANYAAQ---KSLIHIIGTTGFSKTEEAQ-IADFAKYTT-IVKSGNMSLGVNLLANLVKRAAKALDDDF 167 (288)
T ss_dssp EECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHHHH-HHHHHTTSE-EEECSCCCHHHHHHHHHHHHHHHHSCTTS
T ss_pred EEcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHHHH-HHHHhCcCC-EEEECCCcHHHHHHHHHHHHHHHhcCCCC
Confidence 999999887776665443 344 344456875322211 001112344 5788988755411 0000000001 12
Q ss_pred CceEEEeecC----C-CCHHHHHHHHHHHHHhCC
Q 014863 258 GINSSFAVHQ----D-VDGRATNVALGWSVALGS 286 (417)
Q Consensus 258 Gv~~liav~q----d-~sgea~e~a~al~~aiG~ 286 (417)
-+- ++-.|. | +||.++.+++.+....|.
T Consensus 168 die-IiE~HH~~K~DaPSGTA~~la~~i~~~~~~ 200 (288)
T 3ijp_A 168 DIE-IYEMHHANKVDSPSGTALLLGQAAAEGRNI 200 (288)
T ss_dssp EEE-EEEEECTTCCCSSCHHHHHHHHHHHHHTTS
T ss_pred CEE-EEEccCCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 232 233343 2 789999999999998875
No 297
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.47 E-value=0.0017 Score=62.41 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=52.6
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCc--------eecCCCcCCHHhhhcc
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF--------TEENGTLGDIYETISG 178 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~--------~~~d~~~~~~~Eav~~ 178 (417)
.++| +++.|+|.|-+|.+++..|.+. | +|++.+|+.++..+.+.+.+. .. + +.+..+.+.+
T Consensus 125 ~l~~-k~vlV~GaGgiG~aia~~L~~~------G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~-d--~~~~~~~~~~ 193 (287)
T 1nvt_A 125 RVKD-KNIVIYGAGGAARAVAFELAKD------N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEV-K--FSGLDVDLDG 193 (287)
T ss_dssp CCCS-CEEEEECCSHHHHHHHHHHTSS------S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHE-E--EECTTCCCTT
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHC------C-CEEEEECCHHHHHHHHHHHhhhcccccceeE-E--EeeHHHhhCC
Confidence 4678 9999999999999999999998 9 998888764443333333211 10 0 2233566788
Q ss_pred CCeEEEeecchhH
Q 014863 179 SDLVLLLISDAAQ 191 (417)
Q Consensus 179 ADiViLavpd~a~ 191 (417)
+|+||.++|....
T Consensus 194 ~DilVn~ag~~~~ 206 (287)
T 1nvt_A 194 VDIIINATPIGMY 206 (287)
T ss_dssp CCEEEECSCTTCT
T ss_pred CCEEEECCCCCCC
Confidence 9999999986543
No 298
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=96.32 E-value=0.017 Score=56.49 Aligned_cols=69 Identities=16% Similarity=0.147 Sum_probs=42.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHHc----CceecCC--CcCCHHhhhccCCeEE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA----GFTEENG--TLGDIYETISGSDLVL 183 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~~----G~~~~d~--~~~~~~Eav~~ADiVi 183 (417)
|||+|||.|.+|.++|..|..+ ++ ++++.+.......-.|.+. -+...+. ...+..+++++||+|+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~------~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVv 74 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIV 74 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEE
Confidence 6899999999999999999888 65 5655554432222222221 0110000 0122236789999999
Q ss_pred Eee
Q 014863 184 LLI 186 (417)
Q Consensus 184 Lav 186 (417)
++.
T Consensus 75 itA 77 (294)
T 2x0j_A 75 VTA 77 (294)
T ss_dssp ECC
T ss_pred Eec
Confidence 976
No 299
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.31 E-value=0.0077 Score=60.13 Aligned_cols=74 Identities=15% Similarity=0.079 Sum_probs=47.0
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHH--HcC-ceecC-CCcCCHHhhhcc
Q 014863 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAG-FTEEN-GTLGDIYETISG 178 (417)
Q Consensus 106 ~~l~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~--~~G-~~~~d-~~~~~~~Eav~~ 178 (417)
+++.+ +||+|||. |.+|.++|..+... |. ++++.+....+....+. ..+ +.... ....+..+++++
T Consensus 4 ~~~~~-~KV~ViGaaG~VG~~~a~~l~~~------g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~d 76 (343)
T 3fi9_A 4 SYLTE-EKLTIVGAAGMIGSNMAQTAAMM------RLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTD 76 (343)
T ss_dssp CCSCS-SEEEEETTTSHHHHHHHHHHHHT------TCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTT
T ss_pred cccCC-CEEEEECCCChHHHHHHHHHHhc------CCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCC
Confidence 45566 99999997 99999999998887 74 66655543222221111 111 11000 012467789999
Q ss_pred CCeEEEee
Q 014863 179 SDLVLLLI 186 (417)
Q Consensus 179 ADiViLav 186 (417)
||+||++.
T Consensus 77 ADvVvita 84 (343)
T 3fi9_A 77 AKYIVSSG 84 (343)
T ss_dssp EEEEEECC
T ss_pred CCEEEEcc
Confidence 99999985
No 300
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.25 E-value=0.0031 Score=60.95 Aligned_cols=98 Identities=18% Similarity=0.173 Sum_probs=64.4
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
.++| +++.|||.|-.+.+++..|.+. |. +|.+.+|..++..+.++..+............+.++++|+||.+
T Consensus 122 ~~~~-~~~lilGaGGaarai~~aL~~~------g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNa 194 (269)
T 3tum_A 122 EPAG-KRALVIGCGGVGSAIAYALAEA------GIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANA 194 (269)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEEC
T ss_pred Cccc-CeEEEEecHHHHHHHHHHHHHh------CCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccC
Confidence 4577 9999999999999999999998 86 78888887666555555432110000012233456789999999
Q ss_pred ecchhHHH----HHHHHHhcCCCCcEEEEe
Q 014863 186 ISDAAQAD----NYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 186 vpd~a~~~----Vl~eI~p~Lk~GaiL~~a 211 (417)
||...... +-......++++.++.|.
T Consensus 195 Tp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~ 224 (269)
T 3tum_A 195 SPVGMGTRAELPLSAALLATLQPDTLVADV 224 (269)
T ss_dssp SSTTCSTTCCCSSCHHHHHTCCTTSEEEEC
T ss_pred CccccCCCCCCCCChHHHhccCCCcEEEEE
Confidence 99654321 112334556777777654
No 301
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.18 E-value=0.0055 Score=59.00 Aligned_cols=80 Identities=15% Similarity=0.022 Sum_probs=54.0
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecchhH
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~a~ 191 (417)
|+|++||+|+||..+++. . +++++..+. ++.- +.|... +.|.++++.++|+|+-|.++.+.
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~------~leLv~v~~--~k~g----elgv~a----~~d~d~lla~pD~VVe~A~~~av 73 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G------NFEKIYAYD--RISK----DIPGVV----RLDEFQVPSDVSTVVECASPEAV 73 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S------CCSEEEEEC--SSCC----CCSSSE----ECSSCCCCTTCCEEEECSCHHHH
T ss_pred ceEEEECcCHHHHHHHhc---C------CcEEEEEEe--cccc----ccCcee----eCCHHHHhhCCCEEEECCCHHHH
Confidence 899999999999999887 2 454433333 2211 125543 56788888899999999987765
Q ss_pred HHHHHHHHhcCCCCcEEE-Eecc
Q 014863 192 ADNYEKIFSCMKPNSILG-LSHG 213 (417)
Q Consensus 192 ~~Vl~eI~p~Lk~GaiL~-~a~G 213 (417)
.+.+ .+.|+.|.-|+ .+-|
T Consensus 74 ~e~~---~~iL~aG~dvv~~S~g 93 (253)
T 1j5p_A 74 KEYS---LQILKNPVNYIIISTS 93 (253)
T ss_dssp HHHH---HHHTTSSSEEEECCGG
T ss_pred HHHH---HHHHHCCCCEEEcChh
Confidence 5544 44577787554 4444
No 302
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.17 E-value=0.014 Score=58.11 Aligned_cols=93 Identities=15% Similarity=0.138 Sum_probs=58.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecC---CchhHHHHHHcCcee--------cCCCc--CCHHhhhc
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK---GSRSFAEARAAGFTE--------ENGTL--GDIYETIS 177 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~---~~~s~~~A~~~G~~~--------~d~~~--~~~~Eav~ 177 (417)
+||+||| .|.+|..+++.|.+. .+++++...+. ..+... ...+... .+-.+ .+.++..+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-----p~~ev~~i~~s~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-----PMFELTALAASERSAGKKYK--DACYWFQDRDIPENIKDMVVIPTDPKHEEF 81 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-----SSEEEEEEEECTTTTTSBHH--HHSCCCCSSCCCHHHHTCBCEESCTTSGGG
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-----CCCEEEEEEcccccccccHH--HhcccccccccccCceeeEEEeCCHHHHhc
Confidence 6899999 899999999998765 13466544432 112221 1122110 00001 14455556
Q ss_pred -cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEeccc
Q 014863 178 -GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 178 -~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G~ 214 (417)
++|+||+|+|.....++.+.+. +.|..|++.+|.
T Consensus 82 ~~~DvV~~atp~~~~~~~a~~~~---~aG~~VId~s~~ 116 (354)
T 1ys4_A 82 EDVDIVFSALPSDLAKKFEPEFA---KEGKLIFSNASA 116 (354)
T ss_dssp TTCCEEEECCCHHHHHHHHHHHH---HTTCEEEECCST
T ss_pred CCCCEEEECCCchHHHHHHHHHH---HCCCEEEECCch
Confidence 8999999999998888776654 457778877763
No 303
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.16 E-value=0.03 Score=52.11 Aligned_cols=70 Identities=13% Similarity=0.087 Sum_probs=50.3
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecch
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd~ 189 (417)
||||.|+|.|.+|.++++.|.+. |++|++..|...+ .......++......+.+.+ +.++|+||.+..+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ------GWRIIGTSRNPDQ-MEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG------TCEEEEEESCGGG-HHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHC------CCEEEEEEcChhh-hhhHhhCCCeEEEecccccc--cCCCCEEEECCCcc
Confidence 38999999999999999999999 9998877776443 34444456543211233433 78999999988643
No 304
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.16 E-value=0.0096 Score=50.98 Aligned_cols=108 Identities=19% Similarity=0.095 Sum_probs=72.1
Q ss_pred CEEEEEcc----cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeec
Q 014863 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~----G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavp 187 (417)
++|+|||. +..|..+.++|++. |++|+-.+.+... -.|... ..++.|+-. .|++++++|
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~------g~~V~pVnP~~~~------i~G~~~----y~sl~dlp~-vDlavi~~p 67 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSH------GHEFIPVGRKKGE------VLGKTI----INERPVIEG-VDTVTLYIN 67 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHH------TCCEEEESSSCSE------ETTEEC----BCSCCCCTT-CCEEEECSC
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHC------CCeEEEECCCCCc------CCCeec----cCChHHCCC-CCEEEEEeC
Confidence 78999997 56899999999999 8876655443221 146553 456666555 899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEeccchhhhhhccccCCCCCCcEEEeccCCchhh
Q 014863 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~~a~G~~i~~~~~~~i~~~~di~VI~v~Pn~pg~~ 243 (417)
++...++++++... ... .|.+..|+.-..+.+ +.-..+++++ ||+.+-.
T Consensus 68 ~~~v~~~v~e~~~~-g~k-~v~~~~G~~~~e~~~--~a~~~Girvv---~nC~gv~ 116 (122)
T 3ff4_A 68 PQNQLSEYNYILSL-KPK-RVIFNPGTENEELEE--ILSENGIEPV---IGCTLVM 116 (122)
T ss_dssp HHHHGGGHHHHHHH-CCS-EEEECTTCCCHHHHH--HHHHTTCEEE---ESCHHHH
T ss_pred HHHHHHHHHHHHhc-CCC-EEEECCCCChHHHHH--HHHHcCCeEE---CCcCeEE
Confidence 99999999987653 223 366888984221111 0112466666 3776655
No 305
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.14 E-value=0.0089 Score=61.68 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=51.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHH-HHHcCceecCCCcCC---HHhh-hccCCeEEEee
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-ARAAGFTEENGTLGD---IYET-ISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~-A~~~G~~~~d~~~~~---~~Ea-v~~ADiViLav 186 (417)
|||-|+|+|..|..+|+.|... |++|++-+.. +...+. ....++....+...+ ++++ +++||+++.+|
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~------~~~v~vId~d-~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE------NNDITIVDKD-GDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST------TEEEEEEESC-HHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence 8999999999999999999988 9998776654 444444 445565322122223 2333 78999999888
Q ss_pred cchhHH
Q 014863 187 SDAAQA 192 (417)
Q Consensus 187 pd~a~~ 192 (417)
+++..-
T Consensus 77 ~~De~N 82 (461)
T 4g65_A 77 NTDETN 82 (461)
T ss_dssp SCHHHH
T ss_pred CChHHH
Confidence 876543
No 306
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.09 E-value=0.016 Score=59.01 Aligned_cols=90 Identities=18% Similarity=0.172 Sum_probs=63.5
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecC----Cchh--------HHHHHHcCceecCCCcCCHH
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK----GSRS--------FAEARAAGFTEENGTLGDIY 173 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~----~~~s--------~~~A~~~G~~~~d~~~~~~~ 173 (417)
.++. .||.|+|.|.+|.++|+.|... |. +|++.+++ ..+. ...|.+.... ....+++
T Consensus 189 ~l~~-~kVVv~GAGaAG~~iAkll~~~------G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~---~~~~~L~ 258 (388)
T 1vl6_A 189 KIEE-VKVVVNGIGAAGYNIVKFLLDL------GVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE---RLSGDLE 258 (388)
T ss_dssp CTTT-CEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT---CCCSCHH
T ss_pred CCCC-cEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc---CchhhHH
Confidence 5667 8999999999999999999998 88 78888876 3221 3444442211 1246799
Q ss_pred hhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 014863 174 ETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 174 Eav~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
|+++++|++|=+..|.... +++...|+++.+|.
T Consensus 259 eav~~ADVlIG~Sap~l~t---~emVk~Ma~~pIIf 291 (388)
T 1vl6_A 259 TALEGADFFIGVSRGNILK---PEWIKKMSRKPVIF 291 (388)
T ss_dssp HHHTTCSEEEECSCSSCSC---HHHHTTSCSSCEEE
T ss_pred HHHccCCEEEEeCCCCccC---HHHHHhcCCCCEEE
Confidence 9999999999887643221 24445577887664
No 307
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.07 E-value=0.011 Score=58.85 Aligned_cols=150 Identities=13% Similarity=0.062 Sum_probs=82.0
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCcee--cCCCcCCHHhhhccCCeEEEeec
Q 014863 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE--ENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 111 ~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~--~d~~~~~~~Eav~~ADiViLavp 187 (417)
|+||+||| .|.+|..+.+.|.+. ..++++...+..+...+.....+... .+-.+.+.++ +.++|+|++|+|
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-----p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g 77 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-----PYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALP 77 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-----TTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-----CCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCC
Confidence 36899999 799999999999865 13465544443221111111111100 0111223333 578999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecc-chhh-------hhhccccCCCCCC--cEEEeccCCchhhHHHHHhhcccccCC
Q 014863 188 DAAQADNYEKIFSCMKPNSILGLSHG-FLLG-------HLQSMGLDFPKNI--GVIAVCPKGMGPSVRRLYVQGKEINGA 257 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~~a~G-~~i~-------~~~~~~i~~~~di--~VI~v~Pn~pg~~vr~ly~~G~e~~G~ 257 (417)
.....++.+.+. +.|..|++.++ +.+. |+.. +..+++ +++.+.|.- -++.+...
T Consensus 78 ~~~s~~~a~~~~---~aG~~VId~Sa~~r~~~~~~y~~~y~~---h~~~e~l~~~vygvpE~----n~~~i~~~------ 141 (345)
T 2ozp_A 78 HGVFAREFDRYS---ALAPVLVDLSADFRLKDPELYRRYYGE---HPRPDLLGRFVYAVPEL----YREALKGA------ 141 (345)
T ss_dssp TTHHHHTHHHHH---TTCSEEEECSSTTSCSCHHHHHHHHCC---CSSGGGTTSSEECCHHH----HHHHHHTC------
T ss_pred cHHHHHHHHHHH---HCCCEEEEcCccccCCChHHHHhhhcc---ccchhhhccCcEecccc----CHHHhhcC------
Confidence 998877776543 56777777766 4221 1211 211221 456666621 24444431
Q ss_pred CceEEEeecCCCCHHHHHHHHHHHHHhCC
Q 014863 258 GINSSFAVHQDVDGRATNVALGWSVALGS 286 (417)
Q Consensus 258 Gv~~liav~qd~sgea~e~a~al~~aiG~ 286 (417)
. +|+ ...++......++.-+..-|.
T Consensus 142 --~-iIa-np~C~tt~~~~~l~pL~~~~~ 166 (345)
T 2ozp_A 142 --D-WIA-GAGCNATATLLGLYPLLKAGV 166 (345)
T ss_dssp --S-EEE-CCCHHHHHHHHHHHHHHHTTC
T ss_pred --C-EEe-CCCcHHHHHHHHHHHHHHhcC
Confidence 2 344 566677776666655555443
No 308
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.07 E-value=0.0097 Score=58.09 Aligned_cols=78 Identities=17% Similarity=0.175 Sum_probs=57.2
Q ss_pred cccCCCCEEEEEcccch-HHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 014863 106 DAFNGINQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~m-G~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViL 184 (417)
..++| +++.|||.|.+ |..+|+.|... |.|..|.+..+. ..++.+.+++||+||.
T Consensus 154 i~l~g-k~vvVvG~s~iVG~p~A~lL~~~----g~~atVtv~h~~-------------------t~~L~~~~~~ADIVI~ 209 (281)
T 2c2x_A 154 ISIAG-AHVVVIGRGVTVGRPLGLLLTRR----SENATVTLCHTG-------------------TRDLPALTRQADIVVA 209 (281)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHTST----TTCCEEEEECTT-------------------CSCHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCcHHHHHHHHHHhcC----CCCCEEEEEECc-------------------hhHHHHHHhhCCEEEE
Confidence 36889 99999999986 99999998765 002467766432 2367889999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+++-... +. ..++|+|++|+|++
T Consensus 210 Avg~p~~---I~--~~~vk~GavVIDVg 232 (281)
T 2c2x_A 210 AVGVAHL---LT--ADMVRPGAAVIDVG 232 (281)
T ss_dssp CSCCTTC---BC--GGGSCTTCEEEECC
T ss_pred CCCCCcc---cC--HHHcCCCcEEEEcc
Confidence 9984432 21 23468999988775
No 309
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.07 E-value=0.02 Score=59.72 Aligned_cols=73 Identities=18% Similarity=0.126 Sum_probs=44.0
Q ss_pred CEEEEEcccchH--HHHHHHHHhhhhhhcC-CceEEEEecCCchhHHHHH--------HcCceecCCCcCCHHhhhccCC
Q 014863 112 NQIGVIGWGSQG--PAQAQNLRDSLAEAKS-DIVVKVGLRKGSRSFAEAR--------AAGFTEENGTLGDIYETISGSD 180 (417)
Q Consensus 112 kkIgIIG~G~mG--~AiA~~Lr~s~~~~~~-G~~Vivg~r~~~~s~~~A~--------~~G~~~~d~~~~~~~Eav~~AD 180 (417)
+||+|||.|+|| .+++..|... .+. +.+|++.++...+ .+.+. ..+....-....|.++++++||
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~---~~l~~~eV~L~Di~~e~-l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD 79 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKT---PGLSGSTVTLMDIDEER-LDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDAD 79 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTC---GGGTTCEEEEECSCHHH-HHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHHhc---CcCCCCEEEEEeCCHHH-HHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCC
Confidence 699999999985 5556677542 112 5577777665332 11111 1111100001357778999999
Q ss_pred eEEEeecc
Q 014863 181 LVLLLISD 188 (417)
Q Consensus 181 iViLavpd 188 (417)
+||+++|.
T Consensus 80 ~VIiaagv 87 (480)
T 1obb_A 80 FVINTAMV 87 (480)
T ss_dssp EEEECCCT
T ss_pred EEEECCCc
Confidence 99999974
No 310
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.05 E-value=0.014 Score=57.78 Aligned_cols=98 Identities=14% Similarity=0.087 Sum_probs=56.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhh-hhhcCCceEEEEecCCch---------hH-HHHHHcCceecCCCcCCHHhhhc--c
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSL-AEAKSDIVVKVGLRKGSR---------SF-AEARAAGFTEENGTLGDIYETIS--G 178 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~-~~~~~G~~Vivg~r~~~~---------s~-~~A~~~G~~~~d~~~~~~~Eav~--~ 178 (417)
.+|+|||+|.+|..+++.|.+.- ...|.+++++...+.+.. .+ +.+.+.|... +..+ +..+.+. +
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~-~~~~-d~~e~l~~~~ 82 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRIS-DRAF-SGPEDLMGEA 82 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSC-SSBC-CSGGGGTTSC
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCC-cccC-CHHHHhcCCC
Confidence 47999999999999999997731 111224454433333221 12 2333445221 1012 5566664 5
Q ss_pred CCeEEEeecchhHH-HHHHHHHhcCCCCcEEEEe
Q 014863 179 SDLVLLLISDAAQA-DNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 179 ADiViLavpd~a~~-~Vl~eI~p~Lk~GaiL~~a 211 (417)
.|+|+.|+|+..+. ..++-+...|+.|+.|+.+
T Consensus 83 iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta 116 (325)
T 3ing_A 83 ADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA 116 (325)
T ss_dssp CSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEECCCCccccchHHHHHHHHHHCCCeEEEc
Confidence 89999999987552 3344455567778876643
No 311
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.97 E-value=0.024 Score=51.59 Aligned_cols=75 Identities=19% Similarity=0.166 Sum_probs=52.4
Q ss_pred ccccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCc-eec--CCCcCCHHhhhccCC
Q 014863 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF-TEE--NGTLGDIYETISGSD 180 (417)
Q Consensus 105 ~~~l~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~-~~~--d~~~~~~~Eav~~AD 180 (417)
...|+| |+|.|.|. |-+|.++++.|.+. |++|++..|+.++ .+.....++ ... |-+ .+..+++.+.|
T Consensus 16 ~~~l~~-~~ilVtGatG~iG~~l~~~L~~~------G~~V~~~~R~~~~-~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~D 86 (236)
T 3e8x_A 16 NLYFQG-MRVLVVGANGKVARYLLSELKNK------GHEPVAMVRNEEQ-GPELRERGASDIVVANLE-EDFSHAFASID 86 (236)
T ss_dssp -----C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSGGG-HHHHHHTTCSEEEECCTT-SCCGGGGTTCS
T ss_pred ccCcCC-CeEEEECCCChHHHHHHHHHHhC------CCeEEEEECChHH-HHHHHhCCCceEEEcccH-HHHHHHHcCCC
Confidence 467889 99999997 99999999999999 9999888876544 334344455 321 211 45567888999
Q ss_pred eEEEeecc
Q 014863 181 LVLLLISD 188 (417)
Q Consensus 181 iViLavpd 188 (417)
+||.+...
T Consensus 87 ~vi~~ag~ 94 (236)
T 3e8x_A 87 AVVFAAGS 94 (236)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998864
No 312
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.92 E-value=0.021 Score=53.71 Aligned_cols=89 Identities=10% Similarity=0.129 Sum_probs=61.0
Q ss_pred cccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhH-HHHHHcCceecCCCcCCHHhhhcc
Q 014863 100 LFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AEARAAGFTEENGTLGDIYETISG 178 (417)
Q Consensus 100 ~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~-~~A~~~G~~~~d~~~~~~~Eav~~ 178 (417)
-||.. -.++| ++|.|||.|.+|..-++.|.+. |.+|+|......+.. +.+.+.++....+. .. ++-+.+
T Consensus 22 ~~Pif-l~L~g-k~VLVVGgG~va~~ka~~Ll~~------GA~VtVvap~~~~~l~~l~~~~~i~~i~~~-~~-~~dL~~ 91 (223)
T 3dfz_A 22 MYTVM-LDLKG-RSVLVVGGGTIATRRIKGFLQE------GAAITVVAPTVSAEINEWEAKGQLRVKRKK-VG-EEDLLN 91 (223)
T ss_dssp CCEEE-ECCTT-CCEEEECCSHHHHHHHHHHGGG------CCCEEEECSSCCHHHHHHHHTTSCEEECSC-CC-GGGSSS
T ss_pred ccccE-EEcCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCCCCHHHHHHHHcCCcEEEECC-CC-HhHhCC
Confidence 46655 57999 9999999999999999999999 988877765433333 33333334321111 12 345789
Q ss_pred CCeEEEeecchhHHHHHHHH
Q 014863 179 SDLVLLLISDAAQADNYEKI 198 (417)
Q Consensus 179 ADiViLavpd~a~~~Vl~eI 198 (417)
+|+||.+|.+...-..+.+.
T Consensus 92 adLVIaAT~d~~~N~~I~~~ 111 (223)
T 3dfz_A 92 VFFIVVATNDQAVNKFVKQH 111 (223)
T ss_dssp CSEEEECCCCTHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHHHHHH
Confidence 99999999887665554444
No 313
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.89 E-value=0.019 Score=55.76 Aligned_cols=91 Identities=11% Similarity=0.176 Sum_probs=60.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCH---Hhh-hccCCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YET-ISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~---~Ea-v~~ADiViLavp 187 (417)
++|.|+|+|..|..+++.|.+. |+ |++.+ .+++..+ +.+.|+....+...+. +++ +++||.|+++++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~------g~-v~vid-~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS------EV-FVLAE-DENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS------CE-EEEES-CGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred CCEEEECCcHHHHHHHHHHHhC------Cc-EEEEe-CChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence 6899999999999999999888 88 66554 4455455 6666765322222333 234 789999999999
Q ss_pred chhHHHHHHHHHhcCCCC-cEEEEe
Q 014863 188 DAAQADNYEKIFSCMKPN-SILGLS 211 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~G-aiL~~a 211 (417)
++...-..-..+..+.++ .++.-+
T Consensus 187 ~d~~n~~~~~~ar~~~~~~~iiar~ 211 (336)
T 1lnq_A 187 SDSETIHCILGIRKIDESVRIIAEA 211 (336)
T ss_dssp SHHHHHHHHHHHHTTCTTSEEEEEC
T ss_pred ccHHHHHHHHHHHHHCCCCeEEEEE
Confidence 875443333444455555 455544
No 314
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.77 E-value=0.017 Score=57.84 Aligned_cols=148 Identities=11% Similarity=-0.004 Sum_probs=82.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC-ceEEEEecCCchhHHHHHHcCcee----cCCCcCCHHhhhccCCeEEEe
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTE----ENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~----~d~~~~~~~Eav~~ADiViLa 185 (417)
+||+|+| .|.+|..+.+.|.+. . ++++...+..+...+.....+... .+-.+.+ ++...++|+||+|
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~------p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~a 89 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH------PHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCC 89 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC------SSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEEC
T ss_pred cEEEEECcCCHHHHHHHHHHHcC------CCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEc
Confidence 5899999 899999999999876 4 465555443222222222222110 0001222 4455789999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEEecc-chh-------hhhhccccCCCCC--CcEEEeccCCchhhHHHHHhhccccc
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILGLSHG-FLL-------GHLQSMGLDFPKN--IGVIAVCPKGMGPSVRRLYVQGKEIN 255 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~~a~G-~~i-------~~~~~~~i~~~~d--i~VI~v~Pn~pg~~vr~ly~~G~e~~ 255 (417)
+|.....+.... + +.|..+++.++ |.+ .|+... +..++ -+++.+.|-. -++.+...
T Consensus 90 tp~~~s~~~a~~---~-~aG~~VId~sa~~R~~~~~~y~~~y~~~--~~~~~~l~~~vygvpE~----n~~~i~~~---- 155 (359)
T 1xyg_A 90 LPHGTTQEIIKE---L-PTALKIVDLSADFRLRNIAEYEEWYGQP--HKAVELQKEVVYGLTEI----LREDIKKA---- 155 (359)
T ss_dssp CCTTTHHHHHHT---S-CTTCEEEECSSTTTCSCHHHHHHHHSSC--CSCHHHHTTCEECCHHH----HHHHHHTC----
T ss_pred CCchhHHHHHHH---H-hCCCEEEECCccccCCchhhhhhhhcCC--cCChhhcCCceEECCcc----CHHHhccC----
Confidence 999888766543 3 66888887776 321 122110 11111 1456666621 23444431
Q ss_pred CCCceEEEeecCCCCHHHHHHHHHHHHHhCC
Q 014863 256 GAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (417)
Q Consensus 256 G~Gv~~liav~qd~sgea~e~a~al~~aiG~ 286 (417)
. +|+ ...++......++.-+..-|.
T Consensus 156 ----~-iIa-npgC~tt~~~~~l~pL~~~~~ 180 (359)
T 1xyg_A 156 ----R-LVA-NPGCYPTTIQLPLVPLLKANL 180 (359)
T ss_dssp ----S-EEE-CCCHHHHHHHHHHHHHHHTTC
T ss_pred ----C-EEE-CCCcHHHHHHHHHHHHHHcCC
Confidence 2 344 666677777777666655543
No 315
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=95.75 E-value=0.027 Score=58.13 Aligned_cols=91 Identities=16% Similarity=0.267 Sum_probs=56.5
Q ss_pred EEEEEcccchHHHHHHHHHhh---hh-hhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEee
Q 014863 113 QIGVIGWGSQGPAQAQNLRDS---LA-EAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLI 186 (417)
Q Consensus 113 kIgIIG~G~mG~AiA~~Lr~s---~~-~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLav 186 (417)
+|||||+|.+|..++..|.+. +. ..+.+++++...+.+....+.. ..+... ..+.++++. +.|+|+.++
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-~~~~~~----~~d~~ell~d~diDvVve~t 86 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-AGGLPL----TTNPFDVVDDPEIDIVVELI 86 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-HTTCCE----ESCTHHHHTCTTCCEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-cccCcc----cCCHHHHhcCCCCCEEEEcC
Confidence 799999999999999888652 11 1233556544444433222211 223332 467888886 579999999
Q ss_pred cc-hhHHHHHHHHHhcCCCCcEEEEe
Q 014863 187 SD-AAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 187 pd-~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
|+ ..+.+++.+ .|+.|+.|+..
T Consensus 87 p~~~~h~~~~~~---AL~aGKhVvte 109 (444)
T 3mtj_A 87 GGLEPARELVMQ---AIANGKHVVTA 109 (444)
T ss_dssp CSSTTHHHHHHH---HHHTTCEEEEC
T ss_pred CCchHHHHHHHH---HHHcCCEEEEC
Confidence 96 777676643 34567665533
No 316
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.72 E-value=0.029 Score=54.85 Aligned_cols=67 Identities=18% Similarity=0.085 Sum_probs=48.8
Q ss_pred CCEEEEEcccchHHH-HHHHHHhhhhhhcCCceEEEEecCCc-hhHHHHHHcCceecCCCcCCHHhhh-ccCCeEEEe
Q 014863 111 INQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLL 185 (417)
Q Consensus 111 ~kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vivg~r~~~-~s~~~A~~~G~~~~d~~~~~~~Eav-~~ADiViLa 185 (417)
||+|.|||.|-+|.+ +|+.|++. |++|.+.++... ...+..++.|+....+ .+.++.. .++|+||+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~------G~~V~~~D~~~~~~~~~~L~~~gi~v~~g--~~~~~l~~~~~d~vV~S 73 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA------GFEVSGCDAKMYPPMSTQLEALGIDVYEG--FDAAQLDEFKADVYVIG 73 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT------TCEEEEEESSCCTTHHHHHHHTTCEEEES--CCGGGGGSCCCSEEEEC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC------CCEEEEEcCCCCcHHHHHHHhCCCEEECC--CCHHHcCCCCCCEEEEC
Confidence 589999999999996 99999999 999988877543 3345556678764210 2344444 479999985
No 317
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.66 E-value=0.029 Score=55.88 Aligned_cols=93 Identities=15% Similarity=0.202 Sum_probs=58.0
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCC-----chhHHHHH--HcCceecCCCcC---CHHhhhccC
Q 014863 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-----SRSFAEAR--AAGFTEENGTLG---DIYETISGS 179 (417)
Q Consensus 111 ~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-----~~s~~~A~--~~G~~~~d~~~~---~~~Eav~~A 179 (417)
|+||+||| .|.+|..+.+.|.+. .++++.....+. .+.....- -.|.. +-.+. +.++.++++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-----p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~--~~~v~~~~~~~~~~~~~ 76 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-----PHMNITALTVSAQSNDAGKLISDLHPQLKGIV--ELPLQPMSDISEFSPGV 76 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-----TTEEEEEEEEETTCTTTTSBHHHHCGGGTTTC--CCBEEEESSGGGTCTTC
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-----CCCcEEEEEecCchhhcCCchHHhCccccCcc--ceeEeccCCHHHHhcCC
Confidence 67999999 699999999988874 145554433221 12222110 01221 00112 344444899
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
|+||+|+|.....++.+++. +.|..|+|.++
T Consensus 77 Dvvf~a~p~~~s~~~~~~~~---~~g~~vIDlSa 107 (337)
T 3dr3_A 77 DVVFLATAHEVSHDLAPQFL---EAGCVVFDLSG 107 (337)
T ss_dssp SEEEECSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CEEEECCChHHHHHHHHHHH---HCCCEEEEcCC
Confidence 99999999988888877654 46888887765
No 318
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.61 E-value=0.022 Score=58.86 Aligned_cols=93 Identities=13% Similarity=0.152 Sum_probs=63.9
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc---eEEEEe----cC----Cchh---HH-----HHHHcCceecC
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGL----RK----GSRS---FA-----EARAAGFTEEN 166 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~---~Vivg~----r~----~~~s---~~-----~A~~~G~~~~d 166 (417)
..+++ ++|.|+|.|..|.+++..|.+. |. +|++.+ |+ .... .. .+......
T Consensus 182 ~~l~~-~rvlvlGAGgAg~aia~~L~~~------G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~--- 251 (439)
T 2dvm_A 182 KKISE-ITLALFGAGAAGFATLRILTEA------GVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGE--- 251 (439)
T ss_dssp CCTTT-CCEEEECCSHHHHHHHHHHHHT------TCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTT---
T ss_pred CCccC-CEEEEECccHHHHHHHHHHHHc------CCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccc---
Confidence 35678 8999999999999999999998 87 788888 65 2111 11 11111110
Q ss_pred CCcCCHHhhhccCCeEEEeecc--hhHHHHHHHHHhcCCCCcEEEEe
Q 014863 167 GTLGDIYETISGSDLVLLLISD--AAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 167 ~~~~~~~Eav~~ADiViLavpd--~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
....+..|+++++|+||-++|. ....+ +....|+++.+|.+.
T Consensus 252 ~~~~~L~e~l~~aDVlInaT~~~~G~~~~---e~v~~m~~~~iVfDL 295 (439)
T 2dvm_A 252 NIEGGPQEALKDADVLISFTRPGPGVIKP---QWIEKMNEDAIVFPL 295 (439)
T ss_dssp CCCSSHHHHHTTCSEEEECSCCCSSSSCH---HHHTTSCTTCEEEEC
T ss_pred cccccHHHHhccCCEEEEcCCCccCCCCh---HHHHhcCCCCEEEEC
Confidence 0134678999999999999997 54432 234567778877766
No 319
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.60 E-value=0.052 Score=53.29 Aligned_cols=68 Identities=12% Similarity=0.132 Sum_probs=44.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC--ceEEEEecCCchhHHHHH--Hc-Cc--eecC-CCcCCHHhhhccCCeE
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEAR--AA-GF--TEEN-GTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G--~~Vivg~r~~~~s~~~A~--~~-G~--~~~d-~~~~~~~Eav~~ADiV 182 (417)
+||+||| .|.+|.+++..|.+. | .+|++.+.... ...+. .. .. .... ....+..+++++||+|
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~------g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvV 80 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMN------PLVSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLI 80 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHC------TTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEE
Confidence 7999999 899999999999887 7 56666554432 22221 11 11 1100 0012567889999999
Q ss_pred EEeec
Q 014863 183 LLLIS 187 (417)
Q Consensus 183 iLavp 187 (417)
|++.+
T Consensus 81 i~~ag 85 (326)
T 1smk_A 81 IVPAG 85 (326)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99985
No 320
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.52 E-value=0.047 Score=54.15 Aligned_cols=93 Identities=13% Similarity=0.093 Sum_probs=56.1
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecC--CchhHHHHHHcC----------------ceecCC------
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEARAAG----------------FTEENG------ 167 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~--~~~s~~~A~~~G----------------~~~~d~------ 167 (417)
.||||+|+|.+|.-+++.|.+. .+++++...+. +........++. +.. ++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~-----~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v-~g~~i~v~ 77 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNS-----GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVI-NGNPITIF 77 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEE-TTEEEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcC-----CCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEE-CCeEEEEE
Confidence 5999999999999999998765 14676555542 333222222210 000 00
Q ss_pred CcCCHHhhh---ccCCeEEEeecchhHHHHHHHHHhcCCCCc-EEEEecc
Q 014863 168 TLGDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS-ILGLSHG 213 (417)
Q Consensus 168 ~~~~~~Eav---~~ADiViLavpd~a~~~Vl~eI~p~Lk~Ga-iL~~a~G 213 (417)
...++++.- .++|+|+.|+|.....+... .+++.|. .|.+++.
T Consensus 78 ~~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~---~~l~aGak~V~iSap 124 (335)
T 1u8f_O 78 QERDPSKIKWGDAGAEYVVESTGVFTTMEKAG---AHLQGGAKRVIISAP 124 (335)
T ss_dssp CCSSGGGCCTTTTTCCEEEECSSSCCSHHHHG---GGGGGTCSEEEESSC
T ss_pred ecCCHHHCccccCCCCEEEECCCchhhHHHHH---HHHhCCCeEEEeccC
Confidence 012444441 57999999999988877654 4566784 4445543
No 321
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=95.44 E-value=0.098 Score=54.34 Aligned_cols=77 Identities=19% Similarity=0.069 Sum_probs=44.1
Q ss_pred CEEEEEcccch-HHHHHHHHHhhhhhhcC-CceEEEEecCCchhH---HHHH----HcCceecCCCcCCHHhhhccCCeE
Q 014863 112 NQIGVIGWGSQ-GPAQAQNLRDSLAEAKS-DIVVKVGLRKGSRSF---AEAR----AAGFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~G~m-G~AiA~~Lr~s~~~~~~-G~~Vivg~r~~~~s~---~~A~----~~G~~~~d~~~~~~~Eav~~ADiV 182 (417)
+||+|||.|+. |.++|..|... ..+. +.+|+++++...+.. +.+. ..+....-....|.++++++||+|
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~--~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~V 106 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDH--LEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV 106 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHT--TTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhC--CCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEE
Confidence 59999999997 55566566543 0012 346766665533211 1111 111110000135778999999999
Q ss_pred EEeecchh
Q 014863 183 LLLISDAA 190 (417)
Q Consensus 183 iLavpd~a 190 (417)
|+++|...
T Consensus 107 Viaag~~~ 114 (472)
T 1u8x_X 107 MAHIRVGK 114 (472)
T ss_dssp EECCCTTH
T ss_pred EEcCCCcc
Confidence 99998743
No 322
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.43 E-value=0.059 Score=47.75 Aligned_cols=69 Identities=16% Similarity=0.190 Sum_probs=47.2
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC-HHhhhccCCeEEEeecc
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~-~~Eav~~ADiViLavpd 188 (417)
|||.|+| .|.+|.++++.|.+. |++|++..|..++..... .++......+.+ ..+++.++|+||.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR------GHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC------CCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 5899999 599999999999999 999888887644322221 344321111111 11678899999999864
No 323
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=95.36 E-value=0.035 Score=55.19 Aligned_cols=93 Identities=11% Similarity=0.067 Sum_probs=55.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEec-CCchhHHHHHHcCce--------ecCCCcC--CHHhhhccC
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFT--------EENGTLG--DIYETISGS 179 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r-~~~~s~~~A~~~G~~--------~~d~~~~--~~~Eav~~A 179 (417)
+||+||| .|.+|..+.+.|.+. ..++++...+ ..+.........++. ..+-.+. +.++ +.++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~v 78 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKH-----PYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDV 78 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTC-----SSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTC
T ss_pred cEEEEECcCCHHHHHHHHHHHhC-----CCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCC
Confidence 6899999 899999999988765 1346554432 111111122212211 0000011 3333 4789
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
|+|++|+|.....++.+... +.|..|++.++
T Consensus 79 DvVf~atp~~~s~~~a~~~~---~aG~~VId~s~ 109 (350)
T 2ep5_A 79 DVVLSALPNELAESIELELV---KNGKIVVSNAS 109 (350)
T ss_dssp SEEEECCCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CEEEECCChHHHHHHHHHHH---HCCCEEEECCc
Confidence 99999999988888776554 45776777665
No 324
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=95.35 E-value=0.051 Score=56.06 Aligned_cols=75 Identities=20% Similarity=0.094 Sum_probs=45.3
Q ss_pred CEEEEEcccch-HHHHHHHHHh--hhhhhcC-CceEEEEecCC--chhHH---HHH----HcCceecCCCcCCHHhhhcc
Q 014863 112 NQIGVIGWGSQ-GPAQAQNLRD--SLAEAKS-DIVVKVGLRKG--SRSFA---EAR----AAGFTEENGTLGDIYETISG 178 (417)
Q Consensus 112 kkIgIIG~G~m-G~AiA~~Lr~--s~~~~~~-G~~Vivg~r~~--~~s~~---~A~----~~G~~~~d~~~~~~~Eav~~ 178 (417)
+||+|||.|+. |.+++..|.. . +. +.+|+++++.. .+... .+. ..+....-....|..+++++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~----~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~g 83 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYH----ELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDG 83 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTT----TCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC----CCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCC
Confidence 69999999998 7787777765 3 11 23566666554 22111 111 12211000013577889999
Q ss_pred CCeEEEeecchh
Q 014863 179 SDLVLLLISDAA 190 (417)
Q Consensus 179 ADiViLavpd~a 190 (417)
||+||+++|...
T Consensus 84 AD~VVitagv~~ 95 (450)
T 1s6y_A 84 ADFVTTQFRVGG 95 (450)
T ss_dssp CSEEEECCCTTH
T ss_pred CCEEEEcCCCCC
Confidence 999999999643
No 325
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=95.33 E-value=0.012 Score=58.85 Aligned_cols=22 Identities=32% Similarity=0.364 Sum_probs=20.3
Q ss_pred CEEEEEcccchHHHHHHHHHhh
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDS 133 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s 133 (417)
.||||||+|.||..++..|++.
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~ 26 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAM 26 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC
T ss_pred EEEEEEecCHHHHHHHHHHHhc
Confidence 5899999999999999999875
No 326
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=95.31 E-value=0.029 Score=57.86 Aligned_cols=90 Identities=18% Similarity=0.211 Sum_probs=65.9
Q ss_pred cCCCCEEEEEccc----chHHHHHHHHHhhhhhhcCC-ceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeE
Q 014863 108 FNGINQIGVIGWG----SQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLV 182 (417)
Q Consensus 108 l~g~kkIgIIG~G----~mG~AiA~~Lr~s~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiV 182 (417)
|+- ++|+|||.+ ..|..+.++|++. | ..| +...+.... -.|... +.++.|+....|++
T Consensus 6 ~~p-~siAVvGas~~~~~~g~~v~~~l~~~------g~~~v-~pVnP~~~~-----i~G~~~----y~sl~~lp~~~Dla 68 (457)
T 2csu_A 6 FNP-KGIAVIGASNDPKKLGYEVFKNLKEY------KKGKV-YPVNIKEEE-----VQGVKA----YKSVKDIPDEIDLA 68 (457)
T ss_dssp TSC-SEEEEETCCSCTTSHHHHHHHHHTTC------CSSEE-EEECSSCSE-----ETTEEC----BSSTTSCSSCCSEE
T ss_pred cCC-CeEEEECcCCCCCchHHHHHHHHHHc------CCCEE-EEECCCCCe-----ECCEec----cCCHHHcCCCCCEE
Confidence 444 899999998 7899999999887 5 344 344332221 147664 56788887789999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEEeccch
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G~~ 215 (417)
++++|+..+.++++++... .-..+|+++.||.
T Consensus 69 vi~vp~~~~~~~v~e~~~~-Gi~~vv~~s~G~~ 100 (457)
T 2csu_A 69 IIVVPKRFVKDTLIQCGEK-GVKGVVIITAGFG 100 (457)
T ss_dssp EECSCHHHHHHHHHHHHHH-TCCEEEECCCSST
T ss_pred EEecCHHHHHHHHHHHHHc-CCCEEEEecCCCC
Confidence 9999999999999886553 2344677888883
No 327
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=95.26 E-value=0.099 Score=52.09 Aligned_cols=72 Identities=14% Similarity=0.144 Sum_probs=52.6
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHH----HHHHcCceecCCCcCCHHhhh
Q 014863 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLGDIYETI 176 (417)
Q Consensus 107 ~l~g~kkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~----~A~~~G~~~~d~~~~~~~Eav 176 (417)
.|+| .||++||=| +++.|++..+... |.++.+..... ..-.+ .|.+.|.... ...+++|++
T Consensus 152 ~l~g-l~ia~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~eav 222 (333)
T 1duv_G 152 AFNE-MTLVYAGDARNNMGNSMLEAAALT------GLDLRLVAPQACWPEAALVTECRALAQQNGGNIT--LTEDVAKGV 222 (333)
T ss_dssp CGGG-CEEEEESCTTSHHHHHHHHHHHHH------CCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEE--EESCHHHHH
T ss_pred CCCC-cEEEEECCCccchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEE--EEECHHHHh
Confidence 5788 999999986 9999999999888 99887765432 12222 3346773311 156899999
Q ss_pred ccCCeEEEeec
Q 014863 177 SGSDLVLLLIS 187 (417)
Q Consensus 177 ~~ADiViLavp 187 (417)
++||+|+.-+=
T Consensus 223 ~~aDvvytd~w 233 (333)
T 1duv_G 223 EGADFIYTDVW 233 (333)
T ss_dssp TTCSEEEECCS
T ss_pred CCCCEEEeCCc
Confidence 99999998554
No 328
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=95.25 E-value=0.045 Score=56.14 Aligned_cols=69 Identities=22% Similarity=0.214 Sum_probs=49.8
Q ss_pred cCCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 108 FNGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
+..+++|.|||+|-.|.+ +|+-|.+. |++|.+.+...+...+...+.|+.... ....+.++++|+||+.
T Consensus 15 ~~~~~~i~viG~G~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~~---g~~~~~~~~a~~vv~s 84 (475)
T 1p3d_A 15 MRRVQQIHFIGIGGAGMSGIAEILLNE------GYQISGSDIADGVVTQRLAQAGAKIYI---GHAEEHIEGASVVVVS 84 (475)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHH------TCEEEEEESCCSHHHHHHHHTTCEEEE---SCCGGGGTTCSEEEEC
T ss_pred cccCCEEEEEeecHHHHHHHHHHHHhC------CCEEEEECCCCCHHHHHHHhCCCEEEC---CCCHHHcCCCCEEEEC
Confidence 344589999999999997 99999998 999887776554444455567876521 1122456789998885
No 329
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.20 E-value=0.062 Score=51.12 Aligned_cols=144 Identities=16% Similarity=0.194 Sum_probs=81.9
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc-cCCeEEEeecch
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~-~ADiViLavpd~ 189 (417)
+||+|+|+ |.||..+++.+.+. .+++++...+.+ .++++++. ++|+||=+++|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-----~~~elva~~d~~-------------------~dl~~~~~~~~DvvIDfT~p~ 56 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-----DDLTLSAELDAG-------------------DPLSLLTDGNTEVVIDFTHPD 56 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-----TTCEEEEEECTT-------------------CCTHHHHHTTCCEEEECSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEccC-------------------CCHHHHhccCCcEEEEccChH
Confidence 48999996 99999999998754 167776555532 12334443 789999888888
Q ss_pred hHHHHHHHHHhcCCCCc-EEEEeccchhhhhhccccCCC--CCCcEEEeccCCchhh--HHHHHhhcccccCCCceEEEe
Q 014863 190 AQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFP--KNIGVIAVCPKGMGPS--VRRLYVQGKEINGAGINSSFA 264 (417)
Q Consensus 190 a~~~Vl~eI~p~Lk~Ga-iL~~a~G~~i~~~~~~~i~~~--~di~VI~v~Pn~pg~~--vr~ly~~G~e~~G~Gv~~lia 264 (417)
...+.+..... .|. +|+-+.|++-...+....... +++. +...||..--. +-.+.+.--... ..+- ++-
T Consensus 57 a~~~~~~~a~~---~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~-vv~a~N~siGv~ll~~l~~~aa~~~-~die-IiE 130 (245)
T 1p9l_A 57 VVMGNLEFLID---NGIHAVVGTTGFTAERFQQVESWLVAKPNTS-VLIAPNFAIGAVLSMHFAKQAARFF-DSAE-VIE 130 (245)
T ss_dssp THHHHHHHHHH---TTCEEEECCCCCCHHHHHHHHHHHHTSTTCE-EEECSCCCHHHHHHHHHHHHHGGGC-SEEE-EEE
T ss_pred HHHHHHHHHHH---cCCCEEEcCCCCCHHHHHHHHHHHHhCCCCC-EEEECCccHHHHHHHHHHHHHHhhc-CCEE-EEE
Confidence 88777765443 344 444466876442211000111 1333 45678765433 111221110000 1121 233
Q ss_pred ecC----C-CCHHHHHHHHHHHHHhC
Q 014863 265 VHQ----D-VDGRATNVALGWSVALG 285 (417)
Q Consensus 265 v~q----d-~sgea~e~a~al~~aiG 285 (417)
.|. | +||.++.+++.+....+
T Consensus 131 ~HH~~K~DaPSGTA~~lae~i~~~~~ 156 (245)
T 1p9l_A 131 LHHPHKADAPSGTAARTAKLIAEARK 156 (245)
T ss_dssp EECTTCCSSSCHHHHHHHHHHHHHTT
T ss_pred CcccCCCCCCCHHHHHHHHHHHHhhc
Confidence 333 3 58999999999988765
No 330
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.19 E-value=0.035 Score=56.68 Aligned_cols=69 Identities=19% Similarity=0.198 Sum_probs=51.1
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCC---chhHHHHHHcCceecCCCcC-CHHhhhcc-CCe
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG---SRSFAEARAAGFTEENGTLG-DIYETISG-SDL 181 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~---~~s~~~A~~~G~~~~d~~~~-~~~Eav~~-ADi 181 (417)
.++| ++|.|||.|..|.+.|+-|++. |++|.+.++.. .+..+..++.|+... .. ..++.+.+ +|+
T Consensus 6 ~~~~-k~v~viG~G~sG~s~A~~l~~~------G~~V~~~D~~~~~~~~~~~~L~~~gi~~~---~g~~~~~~~~~~~d~ 75 (451)
T 3lk7_A 6 TFEN-KKVLVLGLARSGEAAARLLAKL------GAIVTVNDGKPFDENPTAQSLLEEGIKVV---CGSHPLELLDEDFCY 75 (451)
T ss_dssp TTTT-CEEEEECCTTTHHHHHHHHHHT------TCEEEEEESSCGGGCHHHHHHHHTTCEEE---ESCCCGGGGGSCEEE
T ss_pred hcCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEeCCcccCChHHHHHHhCCCEEE---ECCChHHhhcCCCCE
Confidence 4678 9999999999999999999999 99998877643 233455566787642 12 23345566 899
Q ss_pred EEEe
Q 014863 182 VLLL 185 (417)
Q Consensus 182 ViLa 185 (417)
||+.
T Consensus 76 vv~s 79 (451)
T 3lk7_A 76 MIKN 79 (451)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
No 331
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=95.19 E-value=0.1 Score=51.99 Aligned_cols=72 Identities=17% Similarity=0.107 Sum_probs=52.4
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHH----HHHHcCceecCCCcCCHHhhh
Q 014863 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLGDIYETI 176 (417)
Q Consensus 107 ~l~g~kkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~----~A~~~G~~~~d~~~~~~~Eav 176 (417)
.|+| .||++||=| +++.|++..+... |.+|.+...+. ..-.+ .|.+.|.... ...+++|++
T Consensus 152 ~l~g-l~va~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~eav 222 (335)
T 1dxh_A 152 PLHD-ISYAYLGDARNNMGNSLLLIGAKL------GMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLT--LTEDPKEAV 222 (335)
T ss_dssp CGGG-CEEEEESCCSSHHHHHHHHHHHHT------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEE--EESCHHHHT
T ss_pred CcCC-eEEEEecCCccchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEE--EEeCHHHHh
Confidence 5788 999999986 9999999999888 99887765432 12222 3336673211 156899999
Q ss_pred ccCCeEEEeec
Q 014863 177 SGSDLVLLLIS 187 (417)
Q Consensus 177 ~~ADiViLavp 187 (417)
++||+|..-+=
T Consensus 223 ~~aDvvytd~w 233 (335)
T 1dxh_A 223 KGVDFVHTDVW 233 (335)
T ss_dssp TTCSEEEECCC
T ss_pred CCCCEEEeCCc
Confidence 99999998554
No 332
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.18 E-value=0.02 Score=52.41 Aligned_cols=85 Identities=13% Similarity=0.191 Sum_probs=53.0
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCC-ceEEEEecCCchhHHHHHHcCceecCCCcCC---HHhhhccCCeEEEe
Q 014863 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLL 185 (417)
Q Consensus 111 ~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~Eav~~ADiViLa 185 (417)
||+|.|.| .|-+|.++++.|.+. | ++|++..|..++..+ ....++......+.+ .+++++++|+||.+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~------G~~~V~~~~R~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~ 95 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADK------QTIKQTLFARQPAKIHK-PYPTNSQIIMGDVLNHAALKQAMQGQDIVYAN 95 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC------TTEEEEEEESSGGGSCS-SCCTTEEEEECCTTCHHHHHHHHTTCSEEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhC------CCceEEEEEcChhhhcc-cccCCcEEEEecCCCHHHHHHHhcCCCEEEEc
Confidence 37899999 799999999999998 9 888877776432211 111122211111233 44678899999988
Q ss_pred ecchhHHHHHHHHHhcC
Q 014863 186 ISDAAQADNYEKIFSCM 202 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~L 202 (417)
..........+.+.+.+
T Consensus 96 a~~~~~~~~~~~~~~~~ 112 (236)
T 3qvo_A 96 LTGEDLDIQANSVIAAM 112 (236)
T ss_dssp CCSTTHHHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHH
Confidence 77644433333444444
No 333
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.12 E-value=0.052 Score=51.35 Aligned_cols=87 Identities=15% Similarity=0.224 Sum_probs=54.9
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCC-------------------chhHHHHHH-----
Q 014863 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFAEARA----- 159 (417)
Q Consensus 105 ~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~-------------------~~s~~~A~~----- 159 (417)
.+.|++ ++|.|||+|-+|..++++|... |+ ++.+.++.. .+....+..
T Consensus 23 q~~l~~-~~VlvvG~GglG~~va~~La~~------Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n 95 (251)
T 1zud_1 23 QQKLLD-SQVLIIGLGGLGTPAALYLAGA------GVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN 95 (251)
T ss_dssp HHHHHT-CEEEEECCSTTHHHHHHHHHHT------TCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred HHHHhc-CcEEEEccCHHHHHHHHHHHHc------CCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC
Confidence 467888 9999999999999999999998 87 555553321 122111111
Q ss_pred cCceec--CCCc--CCHHhhhccCCeEEEeecchhHHHHHHHH
Q 014863 160 AGFTEE--NGTL--GDIYETISGSDLVLLLISDAAQADNYEKI 198 (417)
Q Consensus 160 ~G~~~~--d~~~--~~~~Eav~~ADiViLavpd~a~~~Vl~eI 198 (417)
.++... +..+ .+..+.++++|+||.++........+.+.
T Consensus 96 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~ 138 (251)
T 1zud_1 96 PDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAA 138 (251)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHH
T ss_pred CCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHH
Confidence 122110 0011 12446778899999999876665566554
No 334
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.10 E-value=0.069 Score=47.91 Aligned_cols=72 Identities=15% Similarity=0.213 Sum_probs=47.5
Q ss_pred CEEEEEc-ccchHHHHHHHHH-hhhhhhcCCceEEEEecCCc-hhHHHH-HHcCceecCCCcCC---HHhhhccCCeEEE
Q 014863 112 NQIGVIG-WGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGS-RSFAEA-RAAGFTEENGTLGD---IYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr-~s~~~~~~G~~Vivg~r~~~-~s~~~A-~~~G~~~~d~~~~~---~~Eav~~ADiViL 184 (417)
++|.|+| .|.+|.++++.|. +. |++|++..|+.. +..+.+ ...++......+.+ ..++++++|+||.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYT------DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHC------CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcC------CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 5699999 6999999999999 78 999888777643 222221 11222211111233 3467889999999
Q ss_pred eecch
Q 014863 185 LISDA 189 (417)
Q Consensus 185 avpd~ 189 (417)
+....
T Consensus 80 ~ag~~ 84 (221)
T 3r6d_A 80 GAMES 84 (221)
T ss_dssp SCCCC
T ss_pred cCCCC
Confidence 88753
No 335
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=95.07 E-value=0.13 Score=50.73 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=51.9
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHH----HHHHcCceecCCCcCCHHhhhc
Q 014863 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLGDIYETIS 177 (417)
Q Consensus 107 ~l~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~----~A~~~G~~~~d~~~~~~~Eav~ 177 (417)
.|+| .||++||= +++..|++..+... |.++.+..... ..-.+ .|.+.|.... ...+++|+++
T Consensus 152 ~l~g-l~va~vGD~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~--~~~d~~eav~ 222 (315)
T 1pvv_A 152 TIKG-VKVVYVGDGNNVAHSLMIAGTKL------GADVVVATPEGYEPDEKVIKWAEQNAAESGGSFE--LLHDPVKAVK 222 (315)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EESCHHHHTT
T ss_pred CcCC-cEEEEECCCcchHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEE--EEeCHHHHhC
Confidence 5789 99999996 79999999999888 99887765432 12222 3336673211 1578999999
Q ss_pred cCCeEEEee
Q 014863 178 GSDLVLLLI 186 (417)
Q Consensus 178 ~ADiViLav 186 (417)
+||+|+..+
T Consensus 223 ~aDvvy~~~ 231 (315)
T 1pvv_A 223 DADVIYTDV 231 (315)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEcc
Confidence 999999855
No 336
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.98 E-value=0.053 Score=56.16 Aligned_cols=66 Identities=15% Similarity=0.143 Sum_probs=51.0
Q ss_pred CCEEEEEcccchHHH-HHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 111 INQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 111 ~kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
+++|.|||.|-.|.+ +|+-|++. |++|.+.+.......+..++.|+... .....+.+.++|+||+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~---~g~~~~~~~~~d~vV~S 88 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANE------GYQISGSDLAPNSVTQHLTALGAQIY---FHHRPENVLDASVVVVS 88 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT------TCEEEEECSSCCHHHHHHHHTTCEEE---SSCCGGGGTTCSEEEEC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHCCCEEE---CCCCHHHcCCCCEEEEC
Confidence 489999999999996 89999999 99998877665555566677788752 22334457789999985
No 337
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=94.93 E-value=0.065 Score=52.03 Aligned_cols=66 Identities=26% Similarity=0.338 Sum_probs=41.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc--eEEEEecC-CchhH-HHHHH--------cCceecCCCcCCHHhhhcc
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRK-GSRSF-AEARA--------AGFTEENGTLGDIYETISG 178 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~-~~~s~-~~A~~--------~G~~~~d~~~~~~~Eav~~ 178 (417)
+||+||| .|.+|.+++..|... ++ ++.+.+++ +.... ..+.+ ..+... ..+ .+++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~------~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~---~~~-~~a~~~ 70 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR------DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVR---QGG-YEDTAG 70 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEE---ECC-GGGGTT
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEE---eCC-HHHhCC
Confidence 5899999 999999999999877 65 45555441 22111 11111 011110 123 678999
Q ss_pred CCeEEEeec
Q 014863 179 SDLVLLLIS 187 (417)
Q Consensus 179 ADiViLavp 187 (417)
||+||++..
T Consensus 71 aDvVi~~ag 79 (303)
T 1o6z_A 71 SDVVVITAG 79 (303)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEcCC
Confidence 999999975
No 338
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=94.85 E-value=0.068 Score=52.43 Aligned_cols=69 Identities=13% Similarity=0.147 Sum_probs=43.5
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCc-------eEEEEecCC----ch-hHHHH--HHcC---ceecCCCcCCHH
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKVGLRKG----SR-SFAEA--RAAG---FTEENGTLGDIY 173 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~-------~Vivg~r~~----~~-s~~~A--~~~G---~~~~d~~~~~~~ 173 (417)
+||+|||. |.+|.+++..|... |+ +|++ .+.+ .. ....+ ...+ +...-....+..
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~------~~~~~~~~~ev~l-~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~ 78 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG------DMLGKDQPVILQL-LEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPM 78 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT------TTTCTTCCEEEEE-ECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCcCCCCCCEEEE-EcCCCccccccchhhHHHHhhhcccccCcEEEecCcH
Confidence 69999997 99999999999887 64 5655 4443 21 11111 1121 110000125678
Q ss_pred hhhccCCeEEEeec
Q 014863 174 ETISGSDLVLLLIS 187 (417)
Q Consensus 174 Eav~~ADiViLavp 187 (417)
+++++||+||++..
T Consensus 79 ~al~~aD~Vi~~ag 92 (329)
T 1b8p_A 79 TAFKDADVALLVGA 92 (329)
T ss_dssp HHTTTCSEEEECCC
T ss_pred HHhCCCCEEEEeCC
Confidence 89999999998864
No 339
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.82 E-value=0.08 Score=49.61 Aligned_cols=82 Identities=23% Similarity=0.286 Sum_probs=53.4
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchh--HHHH------HHcCceecCCCcCC---HHhhhcc
Q 014863 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS--FAEA------RAAGFTEENGTLGD---IYETISG 178 (417)
Q Consensus 111 ~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s--~~~A------~~~G~~~~d~~~~~---~~Eav~~ 178 (417)
|++|.|+|. |.+|.++++.|.+. |++|++..|..... .+++ ...|+......+.+ +.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 77 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL------GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKN 77 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC------CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcC
Confidence 478999996 99999999999999 99888777763211 1111 23455322112333 4567889
Q ss_pred CCeEEEeecch---hHHHHHHHH
Q 014863 179 SDLVLLLISDA---AQADNYEKI 198 (417)
Q Consensus 179 ADiViLavpd~---a~~~Vl~eI 198 (417)
+|+||.+.... .+..+++..
T Consensus 78 ~d~vi~~a~~~~~~~~~~l~~aa 100 (308)
T 1qyc_A 78 VDVVISTVGSLQIESQVNIIKAI 100 (308)
T ss_dssp CSEEEECCCGGGSGGGHHHHHHH
T ss_pred CCEEEECCcchhhhhHHHHHHHH
Confidence 99999998753 234455443
No 340
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.81 E-value=0.034 Score=53.07 Aligned_cols=75 Identities=20% Similarity=0.170 Sum_probs=50.8
Q ss_pred ccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc----CceecCCCcCC---HHhhhcc
Q 014863 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GFTEENGTLGD---IYETISG 178 (417)
Q Consensus 107 ~l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~----G~~~~d~~~~~---~~Eav~~ 178 (417)
.++| +++.|+| .|-+|.+++..|.+. |.+|++.+|+.++..+.+.+. ++......+.+ ..+++++
T Consensus 116 ~l~g-k~vlVtGaaGGiG~aia~~L~~~------G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 188 (287)
T 1lu9_A 116 SVKG-KKAVVLAGTGPVGMRSAALLAGE------GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG 188 (287)
T ss_dssp CCTT-CEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT
T ss_pred CCCC-CEEEEECCCcHHHHHHHHHHHHC------cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHh
Confidence 3678 9999999 999999999999999 998888888644433333221 21100000222 3566778
Q ss_pred CCeEEEeecc
Q 014863 179 SDLVLLLISD 188 (417)
Q Consensus 179 ADiViLavpd 188 (417)
.|+||.+++.
T Consensus 189 ~DvlVn~ag~ 198 (287)
T 1lu9_A 189 AHFVFTAGAI 198 (287)
T ss_dssp CSEEEECCCT
T ss_pred CCEEEECCCc
Confidence 8999999874
No 341
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.77 E-value=0.029 Score=55.67 Aligned_cols=89 Identities=13% Similarity=0.099 Sum_probs=52.6
Q ss_pred CEEEEEcccchHHHHHHHHHhh---hhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecc
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDS---LAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s---~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd 188 (417)
.||||||+|.+|..+++.|.+. +...|.+++++...+.+.. ++ .++.. .....|.++++ +.|+|+.|+|.
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~---~~--~~~~~-~~~~~d~~~ll-~iDvVve~t~~ 76 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPR---KP--RAIPQ-ELLRAEPFDLL-EADLVVEAMGG 76 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTT---SC--CSSCG-GGEESSCCCCT-TCSEEEECCCC
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHH---Hh--hccCc-ccccCCHHHHh-CCCEEEECCCC
Confidence 5799999999999999999775 1111123444333333211 11 12211 11145777878 99999999997
Q ss_pred hhH-HHHHHHHHhcCCCCcEEEE
Q 014863 189 AAQ-ADNYEKIFSCMKPNSILGL 210 (417)
Q Consensus 189 ~a~-~~Vl~eI~p~Lk~GaiL~~ 210 (417)
..+ .++..+ .|+.|+.|+.
T Consensus 77 ~~~a~~~~~~---AL~aGKhVVt 96 (332)
T 2ejw_A 77 VEAPLRLVLP---ALEAGIPLIT 96 (332)
T ss_dssp SHHHHHHHHH---HHHTTCCEEE
T ss_pred cHHHHHHHHH---HHHcCCeEEE
Confidence 643 344433 3456775554
No 342
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=94.73 E-value=0.033 Score=55.71 Aligned_cols=89 Identities=17% Similarity=0.170 Sum_probs=55.2
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCC-----c-eEEEEecCCc--hhHHHH----HH-cCceecCCCcCCHHhhh
Q 014863 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-----I-VVKVGLRKGS--RSFAEA----RA-AGFTEENGTLGDIYETI 176 (417)
Q Consensus 111 ~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G-----~-~Vivg~r~~~--~s~~~A----~~-~G~~~~d~~~~~~~Eav 176 (417)
|+||+|+| .|.+|..+.+.|.+. + . +++...+..+ +..... .. ...... -.+. +.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~------~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~---~~~~-~~~ 78 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGH------PAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE---PTEA-AVL 78 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC------HHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE---ECCH-HHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC------CCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec---cCCH-HHh
Confidence 37999999 999999999999876 5 3 5444433211 211100 00 011110 1132 446
Q ss_pred ccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 177 ~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
.++|+||+|+|.....++.+.+ +.|..+++.++
T Consensus 79 ~~~DvVf~alg~~~s~~~~~~~----~~G~~vIDlSa 111 (352)
T 2nqt_A 79 GGHDAVFLALPHGHSAVLAQQL----SPETLIIDCGA 111 (352)
T ss_dssp TTCSEEEECCTTSCCHHHHHHS----CTTSEEEECSS
T ss_pred cCCCEEEECCCCcchHHHHHHH----hCCCEEEEECC
Confidence 6899999999998777766554 46777777665
No 343
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=94.59 E-value=0.16 Score=51.09 Aligned_cols=70 Identities=16% Similarity=0.164 Sum_probs=52.3
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHH----HHHHcC--ceecCCCcCCHHh
Q 014863 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (417)
Q Consensus 107 ~l~g~kkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~----~A~~~G--~~~~d~~~~~~~E 174 (417)
.|+| .||++||=| +++.|++..+... |.+|.+..... ....+ .|.+.| +.. ..+++|
T Consensus 173 ~l~g-l~va~vGD~~~rva~Sl~~~~~~l------G~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 241 (359)
T 2w37_A 173 KLQG-LTLTFMGDGRNNVANSLLVTGAIL------GVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVI----TDDLDE 241 (359)
T ss_dssp CCTT-CEEEEESCTTSHHHHHHHHHHHHH------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEE----ESCHHH
T ss_pred CcCC-eEEEEECCCccchHHHHHHHHHHc------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EeCHHH
Confidence 5789 999999986 9999999999888 99887765432 12222 233567 333 578999
Q ss_pred hhccCCeEEEeec
Q 014863 175 TISGSDLVLLLIS 187 (417)
Q Consensus 175 av~~ADiViLavp 187 (417)
++++||+|+..+=
T Consensus 242 av~~aDvvytd~w 254 (359)
T 2w37_A 242 GLKGSNVVYTDVW 254 (359)
T ss_dssp HHTTCSEEEECCS
T ss_pred HhcCCCEEEEccc
Confidence 9999999998554
No 344
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.58 E-value=0.22 Score=48.86 Aligned_cols=92 Identities=18% Similarity=0.164 Sum_probs=60.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceec-CCCc--CCHHhhhc-----cC
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~--~~~~Eav~-----~A 179 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..+ +++..+.+++.|.... +... .+..+.+. ..
T Consensus 191 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~-~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 191 PG-STCAVFGLGGVGFSAIVGCKAA------GASRIIGVGT-HKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECS-CGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEECC-CHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCC
Confidence 46 8999999999999999988888 88 6655444 4556788888886421 1000 12333332 58
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCC-cEEEEe
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~G-aiL~~a 211 (417)
|+||-++... +.++.....++++ -.++..
T Consensus 263 Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 263 DYAVECAGRI---ETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCH---HHHHHHHHHHhcCCCEEEEE
Confidence 9999998752 2345556677776 555543
No 345
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.47 E-value=0.083 Score=51.41 Aligned_cols=93 Identities=18% Similarity=0.174 Sum_probs=61.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhhc------cCC
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav~------~AD 180 (417)
.| ++|.|+|.|.+|...++-++.. |. +|++..++ ++..+.+++.|.... +....+..+.+. ..|
T Consensus 167 ~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 167 SG-KSVLITGAGPLGLLGIAVAKAS------GAYPVIVSEPS-DFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHT------TCCSEEEECSC-HHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCC-HHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCC
Confidence 68 9999999999999999999988 98 77665554 455677778786320 111123333332 589
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+||-++... +.++...+.++++..++..+
T Consensus 239 ~vid~~g~~---~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 239 VFLEFSGAP---KALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEEECSCCH---HHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCCH---HHHHHHHHHHhcCCEEEEEc
Confidence 999999852 23444555666666655443
No 346
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.45 E-value=0.12 Score=48.91 Aligned_cols=81 Identities=21% Similarity=0.176 Sum_probs=53.6
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHH---HHHHcCceecCCCcCC---HHhhhccCCeEEE
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFA---EARAAGFTEENGTLGD---IYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~---~A~~~G~~~~d~~~~~---~~Eav~~ADiViL 184 (417)
++|.|+| .|.+|.++++.|.+. |++|++..|..+...+ .....|+......+.+ +.++++++|+||.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~ 85 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL------GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVIS 85 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHC------CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 5899999 499999999999999 9988877776432222 1123565421111333 4567889999999
Q ss_pred eecch---hHHHHHHHH
Q 014863 185 LISDA---AQADNYEKI 198 (417)
Q Consensus 185 avpd~---a~~~Vl~eI 198 (417)
+.... .+..+++..
T Consensus 86 ~a~~~~~~~~~~l~~aa 102 (318)
T 2r6j_A 86 ALAFPQILDQFKILEAI 102 (318)
T ss_dssp CCCGGGSTTHHHHHHHH
T ss_pred CCchhhhHHHHHHHHHH
Confidence 98753 234455433
No 347
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=94.44 E-value=0.057 Score=53.31 Aligned_cols=93 Identities=12% Similarity=0.081 Sum_probs=53.2
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCC--ceEEE-EecCCchh--------HHHHH-HcCceecCCCcC---CHHhhh
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVKV-GLRKGSRS--------FAEAR-AAGFTEENGTLG---DIYETI 176 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G--~~Viv-g~r~~~~s--------~~~A~-~~G~~~~d~~~~---~~~Eav 176 (417)
.||||||+|.+|..++..|.+.-+....| ++++. .+++..+. +.... ..++.. ... +.++++
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~ll 83 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDS---LEYESISASEAL 83 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGG---CCSEECCHHHHH
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCccc---ccCCCCCHHHHh
Confidence 57999999999999999997751001112 44433 33332211 11111 123210 023 777776
Q ss_pred -ccCCeEEEeecch----hHHHHHHHHHhcCCCCcEEEE
Q 014863 177 -SGSDLVLLLISDA----AQADNYEKIFSCMKPNSILGL 210 (417)
Q Consensus 177 -~~ADiViLavpd~----a~~~Vl~eI~p~Lk~GaiL~~ 210 (417)
.+.|+|+.|+|+. .+.+++.+ .|+.|+.|+.
T Consensus 84 ~~~iDvVv~~t~~~~~~~~~~~~~~~---AL~aGkhVvt 119 (331)
T 3c8m_A 84 ARDFDIVVDATPASADGKKELAFYKE---TFENGKDVVT 119 (331)
T ss_dssp HSSCSEEEECSCCCSSSHHHHHHHHH---HHHTTCEEEE
T ss_pred CCCCCEEEECCCCCCccchHHHHHHH---HHHCCCeEEe
Confidence 4689999999985 44455543 3556776654
No 348
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.42 E-value=0.27 Score=48.99 Aligned_cols=97 Identities=18% Similarity=0.173 Sum_probs=62.6
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh------ccC
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGS 179 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav------~~A 179 (417)
-.| .+|.|+|.|.+|...++-++.. |. +|++ .+.+++..+.+++.|.... +..-.+..+.+ ...
T Consensus 212 ~~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~ 283 (404)
T 3ip1_A 212 RPG-DNVVILGGGPIGLAAVAILKHA------GASKVIL-SEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGA 283 (404)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEE-ECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCC
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEE-ECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCC
Confidence 356 8999999999999999999888 98 6654 4444566788888886421 11112333332 259
Q ss_pred CeEEEeecch--hHHHHHHHHHhcCCCCcEEEEec
Q 014863 180 DLVLLLISDA--AQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 180 DiViLavpd~--a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|+||-++... .....++-+...++++-.++..+
T Consensus 284 D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 284 KLFLEATGVPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp SEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 9999999876 22233333323447776666544
No 349
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=94.42 E-value=0.2 Score=49.93 Aligned_cols=81 Identities=11% Similarity=0.086 Sum_probs=43.1
Q ss_pred cccccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCC--ceEEEEecCCchh--HHHHHH--cC-ce--ecCCCcCCHH
Q 014863 104 LPDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRS--FAEARA--AG-FT--EENGTLGDIY 173 (417)
Q Consensus 104 ~~~~l~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G--~~Vivg~r~~~~s--~~~A~~--~G-~~--~~d~~~~~~~ 173 (417)
++..... -||+|||. |.+|.+++..|.... =.+.+ .++.+.+...... .-.+.+ +. +. ..-....+..
T Consensus 18 ~~~s~~~-vKVaViGAaG~IG~~la~~la~~~-l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~ 95 (345)
T 4h7p_A 18 GPGSMSA-VKVAVTGAAGQIGYALVPLIARGA-LLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPR 95 (345)
T ss_dssp ----CCC-EEEEEESTTSHHHHHHHHHHHHTT-TTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHH
T ss_pred CCCCCCC-CEEEEECcCcHHHHHHHHHHHhcc-ccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChH
Confidence 3445555 69999996 999999999888750 00001 1454444332111 111111 11 10 0000134678
Q ss_pred hhhccCCeEEEee
Q 014863 174 ETISGSDLVLLLI 186 (417)
Q Consensus 174 Eav~~ADiViLav 186 (417)
+++++||+||++-
T Consensus 96 ~a~~~advVvi~a 108 (345)
T 4h7p_A 96 VAFDGVAIAIMCG 108 (345)
T ss_dssp HHTTTCSEEEECC
T ss_pred HHhCCCCEEEECC
Confidence 8999999999965
No 350
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=94.40 E-value=0.11 Score=51.63 Aligned_cols=93 Identities=15% Similarity=0.135 Sum_probs=54.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecC--CchhHHHHH----HcC-----cee--cCC---------C-
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEAR----AAG-----FTE--ENG---------T- 168 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~--~~~s~~~A~----~~G-----~~~--~d~---------~- 168 (417)
.||||+|+|.+|.-+++.|.+. .+++++..++. +........ ..| ... +++ .
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~-----p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v 78 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQS-----EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTV 78 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----SSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCC-----CCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEE
Confidence 4999999999999999998765 14566555542 222222221 111 100 000 0
Q ss_pred c--CCHHhh---hccCCeEEEeecchhHHHHHHHHHhcCCCCc--EEEEec
Q 014863 169 L--GDIYET---ISGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSH 212 (417)
Q Consensus 169 ~--~~~~Ea---v~~ADiViLavpd~a~~~Vl~eI~p~Lk~Ga--iL~~a~ 212 (417)
. .+++++ -.++|+|+.|+|.....+..... ++.|. +|+...
T Consensus 79 ~~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~---l~aGak~VVIs~p 126 (337)
T 3e5r_O 79 FGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAH---LKGGAKKVVISAP 126 (337)
T ss_dssp ECCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHH---HHTTCSEEEESSC
T ss_pred EecCChHHccccccCCCEEEECCCchhhHHHHHHH---HHcCCCEEEEecC
Confidence 1 144443 14799999999999888776554 34565 555443
No 351
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.34 E-value=0.071 Score=51.90 Aligned_cols=90 Identities=19% Similarity=0.229 Sum_probs=63.6
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeec
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavp 187 (417)
-.| .+|.|+|.|.+|...++-++.. |.+|++..++ ++..+.+++.|.... ..+.++..+..|+|+-++.
T Consensus 175 ~~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~v---~~~~~~~~~~~D~vid~~g 243 (348)
T 3two_A 175 TKG-TKVGVAGFGGLGSMAVKYAVAM------GAEVSVFARN-EHKKQDALSMGVKHF---YTDPKQCKEELDFIISTIP 243 (348)
T ss_dssp CTT-CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSS-STTHHHHHHTTCSEE---ESSGGGCCSCEEEEEECCC
T ss_pred CCC-CEEEEECCcHHHHHHHHHHHHC------CCeEEEEeCC-HHHHHHHHhcCCCee---cCCHHHHhcCCCEEEECCC
Confidence 357 8999999999999999999888 9887665544 455788888887531 2233333347899999998
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEe
Q 014863 188 DAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
... .++.....++++-.++..
T Consensus 244 ~~~---~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 244 THY---DLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp SCC---CHHHHHTTEEEEEEEEEC
T ss_pred cHH---HHHHHHHHHhcCCEEEEE
Confidence 652 234445567777666544
No 352
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=94.34 E-value=0.1 Score=51.37 Aligned_cols=69 Identities=22% Similarity=0.249 Sum_probs=51.9
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHH----HHHHcC--ceecCCCcCCHHh
Q 014863 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (417)
Q Consensus 107 ~l~g~kkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~----~A~~~G--~~~~d~~~~~~~E 174 (417)
.|+| .||++||=| ++..|++..+... |.+|.+...+. ..-.+ .|.+.| +.. ..+++|
T Consensus 145 ~l~g-l~va~vGD~~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~----~~d~~e 213 (307)
T 2i6u_A 145 ALRG-LRLSYFGDGANNMAHSLLLGGVTA------GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTV----TADAHA 213 (307)
T ss_dssp CCTT-CEEEEESCTTSHHHHHHHHHHHHT------TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEE----ESCHHH
T ss_pred CcCC-eEEEEECCCCcCcHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EECHHH
Confidence 5789 999999986 9999999999888 99887765442 11222 233667 333 578999
Q ss_pred hhccCCeEEEee
Q 014863 175 TISGSDLVLLLI 186 (417)
Q Consensus 175 av~~ADiViLav 186 (417)
++++||+|+..+
T Consensus 214 av~~aDvvy~~~ 225 (307)
T 2i6u_A 214 AAAGADVLVTDT 225 (307)
T ss_dssp HHTTCSEEEECC
T ss_pred HhcCCCEEEecc
Confidence 999999999854
No 353
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=94.31 E-value=0.089 Score=51.82 Aligned_cols=76 Identities=14% Similarity=0.191 Sum_probs=58.2
Q ss_pred cccCCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 014863 106 DAFNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G-~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViL 184 (417)
-.++| |++.|||-+ ..|..+|.-|... +..|.+.... ..++.+.+++||+||.
T Consensus 175 i~l~G-k~vvViGRS~iVGkPla~LL~~~------~ATVTi~Hs~-------------------T~dl~~~~~~ADIvV~ 228 (303)
T 4b4u_A 175 IEIAG-KHAVVVGRSAILGKPMAMMLLQA------NATVTICHSR-------------------TQNLPELVKQADIIVG 228 (303)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHHTCSEEEE
T ss_pred CCCCC-CEEEEEeccccccchHHHHHHhc------CCEEEEecCC-------------------CCCHHHHhhcCCeEEe
Confidence 46889 999999966 6799999999888 8888765432 2367788999999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
++.-... +. ..++|+|++|++++
T Consensus 229 A~G~p~~---i~--~d~vk~GavVIDVG 251 (303)
T 4b4u_A 229 AVGKAEL---IQ--KDWIKQGAVVVDAG 251 (303)
T ss_dssp CSCSTTC---BC--GGGSCTTCEEEECC
T ss_pred ccCCCCc---cc--cccccCCCEEEEec
Confidence 9874322 21 34679999999874
No 354
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=94.30 E-value=0.1 Score=51.81 Aligned_cols=72 Identities=11% Similarity=0.089 Sum_probs=52.3
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHH----HHHHcCceecCCCcCCHHhhh
Q 014863 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLGDIYETI 176 (417)
Q Consensus 107 ~l~g~kkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~----~A~~~G~~~~d~~~~~~~Eav 176 (417)
.|+| .||++||=| ++..|++..+... |.+|.+...+. ..-.+ .|.+.|.... ...+++|++
T Consensus 164 ~l~g-l~va~vGD~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~eav 234 (325)
T 1vlv_A 164 RLKG-VKVVFMGDTRNNVATSLMIACAKM------GMNFVACGPEELKPRSDVFKRCQEIVKETDGSVS--FTSNLEEAL 234 (325)
T ss_dssp CSTT-CEEEEESCTTSHHHHHHHHHHHHT------TCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEE--EESCHHHHH
T ss_pred CcCC-cEEEEECCCCcCcHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEE--EEcCHHHHH
Confidence 5789 999999985 9999999999888 99887765432 12222 3336673211 156899999
Q ss_pred ccCCeEEEeec
Q 014863 177 SGSDLVLLLIS 187 (417)
Q Consensus 177 ~~ADiViLavp 187 (417)
++||+|+..+=
T Consensus 235 ~~aDvvyt~~w 245 (325)
T 1vlv_A 235 AGADVVYTDVW 245 (325)
T ss_dssp TTCSEEEECCC
T ss_pred ccCCEEEeccc
Confidence 99999998543
No 355
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.29 E-value=0.27 Score=48.23 Aligned_cols=92 Identities=18% Similarity=0.204 Sum_probs=60.8
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceec-CCCc--CCHHhhhc-----cC
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~--~~~~Eav~-----~A 179 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..+ +++..+.+++.|.... +..- .+..+.+. ..
T Consensus 195 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~-~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 195 PG-STCAVFGLGCVGLSAIIGCKIA------GASRIIAIDI-NGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECS-CGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcC-CHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCc
Confidence 56 8999999999999999988888 88 6655444 4556788888886421 1000 12333332 58
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCC-cEEEEe
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~G-aiL~~a 211 (417)
|+||-++... +.++.....++++ -.++..
T Consensus 267 Dvvid~~G~~---~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 267 DYSLDCAGTA---QTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SEEEESSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred cEEEECCCCH---HHHHHHHHHhhcCCCEEEEE
Confidence 9999998752 2345556677776 555533
No 356
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.23 E-value=0.17 Score=44.12 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=47.0
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC---HHhhhccCCeEEEeec
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~Eav~~ADiViLavp 187 (417)
|+|.|+|. |.+|.++++.|.+. |++|++..|+..+... ....++......+.+ ..++++++|+||.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~------g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA------GYEVTVLVRDSSRLPS-EGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCGGGSCS-SSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC------CCeEEEEEeChhhccc-ccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 78999997 99999999999999 9998887776432111 001232211111223 4467889999999876
Q ss_pred c
Q 014863 188 D 188 (417)
Q Consensus 188 d 188 (417)
.
T Consensus 77 ~ 77 (206)
T 1hdo_A 77 T 77 (206)
T ss_dssp C
T ss_pred C
Confidence 4
No 357
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=94.23 E-value=0.17 Score=49.91 Aligned_cols=71 Identities=14% Similarity=0.089 Sum_probs=50.6
Q ss_pred ccC-CCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHHHH----HHcCceecCCCcCCHHhhh
Q 014863 107 AFN-GINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEA----RAAGFTEENGTLGDIYETI 176 (417)
Q Consensus 107 ~l~-g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~~A----~~~G~~~~d~~~~~~~Eav 176 (417)
.|+ | .||++|| .+++..|++..+... |.++.+...+. ....+.+ .+.|.... ...+++|++
T Consensus 142 ~l~~g-l~va~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~--~~~d~~eav 212 (307)
T 3tpf_A 142 MQNGI-AKVAFIGDSNNMCNSWLITAAIL------GFEISIAMPKNYKISPEIWEFAMKQALISGAKIS--LGYDKFEAL 212 (307)
T ss_dssp CGGGC-CEEEEESCSSHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EESCHHHHH
T ss_pred CCCCC-CEEEEEcCCCccHHHHHHHHHHc------CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEE--EEcCHHHHh
Confidence 477 9 9999999 458999999999888 98887765432 2222323 35554321 156899999
Q ss_pred ccCCeEEEee
Q 014863 177 SGSDLVLLLI 186 (417)
Q Consensus 177 ~~ADiViLav 186 (417)
++||+|+..+
T Consensus 213 ~~aDvvyt~~ 222 (307)
T 3tpf_A 213 KDKDVVITDT 222 (307)
T ss_dssp TTCSEEEECC
T ss_pred cCCCEEEecC
Confidence 9999999877
No 358
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.18 E-value=0.25 Score=43.91 Aligned_cols=70 Identities=20% Similarity=0.119 Sum_probs=46.9
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC-HHhhhccCCeEEEeecc
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETISGSDLVLLLISD 188 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~-~~Eav~~ADiViLavpd 188 (417)
|||.|+|. |.+|.++++.|.+. |++|++..|...+ .......++......+.+ ..+++.++|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR------GHEVLAVVRDPQK-AADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC------CCEEEEEEecccc-cccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 57999996 99999999999999 9998887776332 222222344321001111 11678899999998854
No 359
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.17 E-value=0.29 Score=48.04 Aligned_cols=92 Identities=18% Similarity=0.207 Sum_probs=60.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceec-CCCc--CCHHhhhc-----cC
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~--~~~~Eav~-----~A 179 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..+ +++..+.+++.|.... +..- .+..+.+. ..
T Consensus 192 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 192 PG-STCAVFGLGAVGLAAVMGCHSA------GAKRIIAVDL-NPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECS-CGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEcC-CHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCC
Confidence 56 8999999999999999999888 88 6655444 4556788888886421 1000 12333332 48
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCC-cEEEEe
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~G-aiL~~a 211 (417)
|+||-++... +.++.....++++ -.++..
T Consensus 264 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 264 DFSLECVGNV---GVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCH---HHHHHHHHHhhcCCcEEEEE
Confidence 9999998752 2345556677776 555533
No 360
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.17 E-value=0.15 Score=47.67 Aligned_cols=82 Identities=18% Similarity=0.176 Sum_probs=53.4
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCC-c-----hhHH---HHHHcCceecCCCcCC---HHhhhc
Q 014863 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-S-----RSFA---EARAAGFTEENGTLGD---IYETIS 177 (417)
Q Consensus 111 ~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-~-----~s~~---~A~~~G~~~~d~~~~~---~~Eav~ 177 (417)
|++|.|+|. |.+|.++++.|.+. |++|++..|.. . ...+ .....|+......+.+ +.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~ 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA------GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH------TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT
T ss_pred CcEEEEECCCchHHHHHHHHHHhC------CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh
Confidence 388999996 99999999999999 99888877764 1 1111 1123455321111333 456788
Q ss_pred cCCeEEEeecch---hHHHHHHHH
Q 014863 178 GSDLVLLLISDA---AQADNYEKI 198 (417)
Q Consensus 178 ~ADiViLavpd~---a~~~Vl~eI 198 (417)
++|+||.+.... .+..+++..
T Consensus 76 ~~d~vi~~a~~~~~~~~~~l~~aa 99 (307)
T 2gas_A 76 QVDIVICAAGRLLIEDQVKIIKAI 99 (307)
T ss_dssp TCSEEEECSSSSCGGGHHHHHHHH
T ss_pred CCCEEEECCcccccccHHHHHHHH
Confidence 999999988753 334455433
No 361
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=94.14 E-value=0.12 Score=51.21 Aligned_cols=69 Identities=16% Similarity=0.242 Sum_probs=50.3
Q ss_pred ccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHHH----HHHcC--ceecCCCcCCHHhh
Q 014863 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAG--FTEENGTLGDIYET 175 (417)
Q Consensus 107 ~l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~~----A~~~G--~~~~d~~~~~~~Ea 175 (417)
.|+| .||++|| .+++..|++..+... |.++.+..... ....+. +.+.| +.. ..+++|+
T Consensus 154 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~----~~d~~ea 222 (323)
T 3gd5_A 154 RLAG-LKLAYVGDGNNVAHSLLLGCAKV------GMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQI----LRDPFEA 222 (323)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEE----ESCHHHH
T ss_pred CCCC-CEEEEECCCCcHHHHHHHHHHHc------CCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEE----ECCHHHH
Confidence 4789 9999999 568999999999887 99887765432 222232 33445 333 5789999
Q ss_pred hccCCeEEEee
Q 014863 176 ISGSDLVLLLI 186 (417)
Q Consensus 176 v~~ADiViLav 186 (417)
+++||+|+..+
T Consensus 223 v~~aDvvyt~~ 233 (323)
T 3gd5_A 223 ARGAHILYTDV 233 (323)
T ss_dssp HTTCSEEEECC
T ss_pred hcCCCEEEEec
Confidence 99999998765
No 362
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.13 E-value=0.075 Score=52.19 Aligned_cols=93 Identities=17% Similarity=0.210 Sum_probs=62.8
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCc--hhHHHHHHcCceecCCCcCCHHhhh----ccCC
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDIYETI----SGSD 180 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~--~s~~~A~~~G~~~~d~~~~~~~Eav----~~AD 180 (417)
.++| ++|.|+|.|.+|...++.++.. |.+|++..+... +..+.+++.|....| .. +..+.+ ...|
T Consensus 178 ~~~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 178 TLNC-RKVLVVGTGPIGVLFTLLFRTY------GLEVWMANRREPTEVEQTVIEETKTNYYN-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp SSTT-CEEEEESCHHHHHHHHHHHHHH------TCEEEEEESSCCCHHHHHHHHHHTCEEEE-CT-TCSHHHHHHHCCEE
T ss_pred cCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCccchHHHHHHHHhCCceec-hH-HHHHHHHHhCCCCC
Confidence 4568 9999999999999999999988 988877666540 345777778875311 11 212222 3589
Q ss_pred eEEEeecchhHHHHH-HHHHhcCCCCcEEEEe
Q 014863 181 LVLLLISDAAQADNY-EKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 iViLavpd~a~~~Vl-~eI~p~Lk~GaiL~~a 211 (417)
+||-++.... .+ +...+.|+++..++..
T Consensus 249 ~vid~~g~~~---~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 249 VIIDATGADV---NILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEECCCCCT---HHHHHHGGGEEEEEEEEEC
T ss_pred EEEECCCChH---HHHHHHHHHHhcCCEEEEE
Confidence 9999988542 23 5556667776555543
No 363
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.13 E-value=0.26 Score=47.50 Aligned_cols=95 Identities=17% Similarity=0.115 Sum_probs=62.9
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh------ccCC
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav------~~AD 180 (417)
..| ++|.|+|.|.+|...++-++.. |..+++..+.+++..+.+++.|.... +..-.+..+.+ ...|
T Consensus 159 ~~g-~~VlV~GaG~vG~~aiq~ak~~------G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CEN-KNVIIIGAGTIGLLAIQCAVAL------GAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTT-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSE
T ss_pred CCC-CEEEEECCCCcchHHHHHHHHc------CCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcc
Confidence 457 8999999999999999999888 88665555555666889999996421 11112333322 3478
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+|+-++... +.++.....++++..++..+
T Consensus 232 ~v~d~~G~~---~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 232 LILETAGVP---QTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEECSCSH---HHHHHHHHHCCTTCEEEECC
T ss_pred ccccccccc---chhhhhhheecCCeEEEEEe
Confidence 888887643 23444455677777666443
No 364
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.13 E-value=0.27 Score=48.21 Aligned_cols=92 Identities=22% Similarity=0.280 Sum_probs=60.2
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceec-CCCc--CCHHhhhc-----cC
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~--~~~~Eav~-----~A 179 (417)
.| ++|.|+|.|.+|...++-++.. |. +|++..++ ++..+.+++.|.... +... .+..+.+. ..
T Consensus 191 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 191 QG-STCAVFGLGGVGLSVIMGCKAA------GAARIIGVDIN-KDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSC-GGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcCC-HHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCC
Confidence 56 8999999999999999999888 88 66554444 556778888886420 1000 12333332 58
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCC-cEEEEe
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~G-aiL~~a 211 (417)
|+||-++... +.++.....++++ -.++..
T Consensus 263 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 263 DFSFEVIGRL---DTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SEEEECSCCH---HHHHHHHHHBCTTTCEEEEC
T ss_pred cEEEECCCCH---HHHHHHHHHhhcCCcEEEEe
Confidence 9999999753 2344455567776 555543
No 365
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.12 E-value=0.073 Score=53.36 Aligned_cols=90 Identities=12% Similarity=0.095 Sum_probs=56.4
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecC--CchhHHHHH---HcCceecCCCcCCHHhhhccCCeEEE
Q 014863 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEAR---AAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 111 ~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~--~~~s~~~A~---~~G~~~~d~~~~~~~Eav~~ADiViL 184 (417)
|.||+||| .|..|.-+.+-|.+. ...++...... ..+.....- ......+ -.+.++...++|+||+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-----P~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~---~~~~~~~~~~~Dvvf~ 84 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-----PEAKITYLSSRTYAGKKLEEIFPSTLENSILS---EFDPEKVSKNCDVLFT 84 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-----TTEEEEEEECSTTTTSBHHHHCGGGCCCCBCB---CCCHHHHHHHCSEEEE
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-----CCcEEEEEeCcccccCChHHhChhhccCceEE---eCCHHHhhcCCCEEEE
Confidence 57999998 799999999998876 12344333222 122222110 0112210 1245555578999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
|+|.....++.+++ .|..|+|.++
T Consensus 85 alp~~~s~~~~~~~-----~g~~VIDlSs 108 (351)
T 1vkn_A 85 ALPAGASYDLVREL-----KGVKIIDLGA 108 (351)
T ss_dssp CCSTTHHHHHHTTC-----CSCEEEESSS
T ss_pred CCCcHHHHHHHHHh-----CCCEEEECCh
Confidence 99998777666544 6888888876
No 366
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.11 E-value=0.16 Score=48.09 Aligned_cols=82 Identities=17% Similarity=0.144 Sum_probs=53.7
Q ss_pred CCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCC-c----hhHHH---HHHcCceecCCCcCC---HHhhhcc
Q 014863 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-S----RSFAE---ARAAGFTEENGTLGD---IYETISG 178 (417)
Q Consensus 111 ~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-~----~s~~~---A~~~G~~~~d~~~~~---~~Eav~~ 178 (417)
||+|.|+|. |.+|.++++.|.+. |++|++..|.. + ...+. ....|+......+.+ +.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~ 77 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF------SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQ 77 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC------CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcC
Confidence 478999995 99999999999998 99888877764 1 11111 123454321111333 4567889
Q ss_pred CCeEEEeecch---hHHHHHHHH
Q 014863 179 SDLVLLLISDA---AQADNYEKI 198 (417)
Q Consensus 179 ADiViLavpd~---a~~~Vl~eI 198 (417)
+|+||.+.... .+..+++..
T Consensus 78 ~d~vi~~a~~~~~~~~~~l~~aa 100 (321)
T 3c1o_A 78 VDIVISALPFPMISSQIHIINAI 100 (321)
T ss_dssp CSEEEECCCGGGSGGGHHHHHHH
T ss_pred CCEEEECCCccchhhHHHHHHHH
Confidence 99999988753 334555543
No 367
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=94.03 E-value=0.072 Score=52.56 Aligned_cols=67 Identities=18% Similarity=0.237 Sum_probs=48.3
Q ss_pred ccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHHHHHHcC--ceecCCCcCCHHhhhccC
Q 014863 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEARAAG--FTEENGTLGDIYETISGS 179 (417)
Q Consensus 107 ~l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~~A~~~G--~~~~d~~~~~~~Eav~~A 179 (417)
.|+| .||++|| .+++..|++..+... |.++.+....+ .... +++.| +.. ..+++|++++|
T Consensus 151 ~l~g-lkva~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~--~~~~g~~v~~----~~d~~eav~~a 217 (309)
T 4f2g_A 151 PIRG-KTVAWVGDANNMLYTWIQAARIL------DFKLQLSTPPGYALDAKLV--DAESAPFYQV----FDDPNEACKGA 217 (309)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCGGGCCCGGGS--CGGGGGGEEE----CSSHHHHTTTC
T ss_pred CCCC-CEEEEECCCcchHHHHHHHHHHc------CCEEEEECCcccCCCHHHH--HHHcCCeEEE----EcCHHHHhcCC
Confidence 4789 9999999 568999999999888 98877764331 1111 12233 333 56899999999
Q ss_pred CeEEEee
Q 014863 180 DLVLLLI 186 (417)
Q Consensus 180 DiViLav 186 (417)
|+|+.-+
T Consensus 218 Dvvyt~~ 224 (309)
T 4f2g_A 218 DLVTTDV 224 (309)
T ss_dssp SEEEECC
T ss_pred CEEEecc
Confidence 9999854
No 368
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=94.02 E-value=0.13 Score=53.05 Aligned_cols=68 Identities=15% Similarity=0.127 Sum_probs=49.1
Q ss_pred CCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 014863 109 NGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLa 185 (417)
..+++|.|||+|-.|.+ +|+-|++. |++|.+.+...+...+...+.|+....+ .+. +.++++|+||+.
T Consensus 17 ~~~~~v~viGiG~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~~g--~~~-~~~~~a~~vv~s 85 (491)
T 2f00_A 17 RRVRHIHFVGIGGAGMGGIAEVLANE------GYQISGSDLAPNPVTQQLMNLGATIYFN--HRP-ENVRDASVVVVS 85 (491)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHT------TCEEEEECSSCCHHHHHHHHTTCEEESS--CCG-GGGTTCSEEEEC
T ss_pred ccCCEEEEEEcCHHHHHHHHHHHHhC------CCeEEEECCCCCHHHHHHHHCCCEEECC--CCH-HHcCCCCEEEEC
Confidence 34589999999999998 99999998 9998877665544344555678765211 122 446789999885
No 369
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.99 E-value=0.15 Score=50.24 Aligned_cols=94 Identities=20% Similarity=0.234 Sum_probs=62.6
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhhc--------
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-------- 177 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav~-------- 177 (417)
-.| .+|.|+|.|.+|...++-++.. |. +|++ .+.+++..+.+++.|.... +....+..+.+.
T Consensus 181 ~~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~-~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~g 252 (370)
T 4ej6_A 181 KAG-STVAILGGGVIGLLTVQLARLA------GATTVIL-STRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPG 252 (370)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEE-ECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTT
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEE-ECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCC
Confidence 357 8999999999999999998888 98 5554 4444566788888887421 111224444444
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 178 ~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
..|+||-++... +.++.....++++-.++..+
T Consensus 253 g~Dvvid~~G~~---~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 253 GVDVVIECAGVA---ETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp CEEEEEECSCCH---HHHHHHHHHEEEEEEEEECS
T ss_pred CCCEEEECCCCH---HHHHHHHHHhccCCEEEEEe
Confidence 389999998743 23444455566666665443
No 370
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=93.97 E-value=0.14 Score=51.30 Aligned_cols=71 Identities=14% Similarity=0.182 Sum_probs=50.6
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHHH----HHHcCceecCCCcCCHHhhhc
Q 014863 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGFTEENGTLGDIYETIS 177 (417)
Q Consensus 107 ~l~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~~----A~~~G~~~~d~~~~~~~Eav~ 177 (417)
.|+| .||+|||= +++..|++..+... |.++.+...+. ....+. |.+.|.... ...+++|+++
T Consensus 176 ~l~g-lkva~vGD~~nva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~--~~~d~~eav~ 246 (340)
T 4ep1_A 176 TFKG-IKLAYVGDGNNVCHSLLLASAKV------GMHMTVATPVGYRPNEEIVKKALAIAKETGAEIE--ILHNPELAVN 246 (340)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEE--EESCHHHHHT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEE--EECCHHHHhC
Confidence 4789 99999995 58899999999888 99887765432 222222 335663210 1568999999
Q ss_pred cCCeEEEee
Q 014863 178 GSDLVLLLI 186 (417)
Q Consensus 178 ~ADiViLav 186 (417)
+||+|+..+
T Consensus 247 ~aDVvyt~~ 255 (340)
T 4ep1_A 247 EADFIYTDV 255 (340)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEecC
Confidence 999998865
No 371
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.97 E-value=0.16 Score=49.19 Aligned_cols=93 Identities=17% Similarity=0.178 Sum_probs=62.5
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhhc----cCCeE
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS----GSDLV 182 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav~----~ADiV 182 (417)
-.| ++|.|+|.|.+|...++-++.. |.+|++..++ ++..+.+++.|.... +....+..+.+. ..|+|
T Consensus 165 ~~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~v 236 (340)
T 3s2e_A 165 RPG-QWVVISGIGGLGHVAVQYARAM------GLRVAAVDID-DAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGV 236 (340)
T ss_dssp CTT-SEEEEECCSTTHHHHHHHHHHT------TCEEEEEESC-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHC------CCeEEEEeCC-HHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEE
Confidence 356 8999999999999999999988 9987665554 556788888886421 111123333333 68999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+.++... +.++.....++++-.++..
T Consensus 237 id~~g~~---~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 237 LVTAVSP---KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp EESSCCH---HHHHHHHHHEEEEEEEEEC
T ss_pred EEeCCCH---HHHHHHHHHhccCCEEEEe
Confidence 9987633 3444555667776666544
No 372
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.96 E-value=0.25 Score=46.55 Aligned_cols=75 Identities=21% Similarity=0.169 Sum_probs=48.7
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH------cCcee---cCCC-cCCHHh
Q 014863 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA------AGFTE---ENGT-LGDIYE 174 (417)
Q Consensus 106 ~~l~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~------~G~~~---~d~~-~~~~~E 174 (417)
..++| |+|.|.|. |-+|.++++.|.+. |++|++..|...+....... .++.. .|-+ ..+..+
T Consensus 7 ~~~~~-~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~ 79 (342)
T 1y1p_A 7 VLPEG-SLVLVTGANGFVASHVVEQLLEH------GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE 79 (342)
T ss_dssp SSCTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT
T ss_pred cCCCC-CEEEEECCccHHHHHHHHHHHHC------CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHH
Confidence 45677 99999996 99999999999999 99988777753322111111 12221 1100 123456
Q ss_pred hhccCCeEEEeec
Q 014863 175 TISGSDLVLLLIS 187 (417)
Q Consensus 175 av~~ADiViLavp 187 (417)
++++.|+||.+..
T Consensus 80 ~~~~~d~vih~A~ 92 (342)
T 1y1p_A 80 VIKGAAGVAHIAS 92 (342)
T ss_dssp TTTTCSEEEECCC
T ss_pred HHcCCCEEEEeCC
Confidence 6778999998764
No 373
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.93 E-value=0.33 Score=47.55 Aligned_cols=92 Identities=20% Similarity=0.163 Sum_probs=60.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceec-CCCc--CCHHhhhc-----cC
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~--~~~~Eav~-----~A 179 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..+ +++..+.+++.|.... +..- .+..+.+. ..
T Consensus 190 ~g-~~VlV~GaG~vG~~avqla~~~------Ga~~Vi~~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 190 PG-SVCAVFGLGGVGLAVIMGCKVA------GASRIIGVDI-NKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECS-CGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcC-CHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCC
Confidence 56 8999999999999999999888 88 6655444 3555778888886420 1000 12333332 58
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCC-cEEEEe
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~G-aiL~~a 211 (417)
|+||-++... +.++.....++++ -.++..
T Consensus 262 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 262 DYSFECIGNV---KVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCcH---HHHHHHHHhhccCCcEEEEE
Confidence 9999998753 2345556677776 555543
No 374
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.86 E-value=0.19 Score=44.53 Aligned_cols=93 Identities=13% Similarity=0.082 Sum_probs=60.3
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh------ccCC
Q 014863 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (417)
Q Consensus 109 ~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav------~~AD 180 (417)
+| ++|.|+| .|.+|.++++.++.. |.+|++..++ .+..+.+++.|.... |....+..+.+ ...|
T Consensus 38 ~g-~~vlV~Ga~ggiG~~~~~~~~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 38 PG-ERVLIHSATGGVGMAAVSIAKMI------GARIYTTAGS-DAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TT-CEEEETTTTSHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEeeCCChHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCe
Confidence 46 8999999 699999999999988 9887766654 344556666665210 11111222222 2479
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
+|+.++.. +.++...+.|+++-.++..+.
T Consensus 110 ~vi~~~g~----~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 110 VVLNSLAG----EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEEECCCT----HHHHHHHHTEEEEEEEEECSC
T ss_pred EEEECCch----HHHHHHHHHhccCCEEEEEcC
Confidence 99988864 345566667777766665543
No 375
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.82 E-value=0.081 Score=52.65 Aligned_cols=95 Identities=18% Similarity=0.229 Sum_probs=62.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceecCCCcCCH-Hhhhc------cCC
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDI-YETIS------GSD 180 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~-~Eav~------~AD 180 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..++ .+..+.+++.|....+....+. .+.+. ..|
T Consensus 185 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 185 PG-SHVYIAGAGPVGRCAAAGARLL------GAACVIVGDQN-PERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEEESC-HHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEcCC-HHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCC
Confidence 56 8999999999999999988888 88 77655544 4557788888874212111122 23222 589
Q ss_pred eEEEeecchh-----------HHHHHHHHHhcCCCCcEEEEe
Q 014863 181 LVLLLISDAA-----------QADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 iViLavpd~a-----------~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+||-++.... ....+++....++++-.++..
T Consensus 257 vvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 257 CGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred EEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 9999998542 123455666667777666544
No 376
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.75 E-value=0.14 Score=50.28 Aligned_cols=93 Identities=12% Similarity=0.069 Sum_probs=60.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhhc-----cCCe
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav~-----~ADi 181 (417)
.| ++|.|+|.|.+|...++-++.. |. +|++..+ +++..+.+++.|.... +....+..+.+. ..|+
T Consensus 190 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~~Vi~~~~-~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 190 PA-SSFVTWGAGAVGLSALLAAKVC------GASIIIAVDI-VESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp TT-CEEEEESCSHHHHHHHHHHHHH------TCSEEEEEES-CHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEECC-CHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcE
Confidence 46 8999999999999999988888 88 4554444 4556778888886320 111123333332 4799
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 182 ViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
||-++... +.++.....++++-.++..+
T Consensus 262 vid~~g~~---~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 262 ALESTGSP---EILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEECSCCH---HHHHHHHHTEEEEEEEEECC
T ss_pred EEECCCCH---HHHHHHHHHHhcCCEEEEeC
Confidence 99998753 23455556677766655443
No 377
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.71 E-value=0.14 Score=50.73 Aligned_cols=96 Identities=25% Similarity=0.284 Sum_probs=62.1
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceecCCCcCC-HHhhh------ccCC
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETI------SGSD 180 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~-~~Eav------~~AD 180 (417)
.| .+|.|+|.|.+|...++-++.. |. .|++.. .+.+..+.+++.|....+..-.+ ..+.+ ...|
T Consensus 185 ~g-~~VlV~GaG~vG~~aiqlAk~~------Ga~~Vi~~~-~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 185 PG-STVYVAGAGPVGLAAAASARLL------GAAVVIVGD-LNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEE-SCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCCeEEEEc-CCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCC
Confidence 56 8999999999999999988888 88 555444 44556788888887431211111 23322 2579
Q ss_pred eEEEeecchh------------HHHHHHHHHhcCCCCcEEEEec
Q 014863 181 LVLLLISDAA------------QADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 iViLavpd~a------------~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+||-++.... ....+++....++++-.++..+
T Consensus 257 vvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 257 CAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred EEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 9999997542 1124555566677766655443
No 378
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.67 E-value=0.072 Score=47.73 Aligned_cols=69 Identities=16% Similarity=0.196 Sum_probs=47.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC----HHhhhccCCeEEEee
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD----IYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~----~~Eav~~ADiViLav 186 (417)
|||.|+| .|.+|.++++.|.+. |++|++..|...+..+. .++......+.+ ..+++++.|+||.+.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT------DYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS------SCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 5899999 899999999999998 99988887764432111 233211111333 345778899999988
Q ss_pred cch
Q 014863 187 SDA 189 (417)
Q Consensus 187 pd~ 189 (417)
...
T Consensus 72 g~~ 74 (219)
T 3dqp_A 72 GSG 74 (219)
T ss_dssp CCT
T ss_pred cCC
Confidence 753
No 379
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.67 E-value=0.31 Score=47.50 Aligned_cols=44 Identities=16% Similarity=0.085 Sum_probs=30.6
Q ss_pred cccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEec
Q 014863 98 RDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (417)
Q Consensus 98 ~~~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r 148 (417)
+|.+..+.+.|++ .+|.|||+|-.|..++++|... |+ ++.+.++
T Consensus 24 ~~G~~~~q~kL~~-~~VlVvGaGGlGs~va~~La~a------GVG~i~lvD~ 68 (292)
T 3h8v_A 24 RMGIVSDYEKIRT-FAVAIVGVGGVGSVTAEMLTRC------GIGKLLLFDY 68 (292)
T ss_dssp --------CGGGG-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECC
T ss_pred ccChHHHHHHHhC-CeEEEECcCHHHHHHHHHHHHc------CCCEEEEECC
Confidence 3445334467888 9999999999999999999998 76 5555543
No 380
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.64 E-value=0.26 Score=48.57 Aligned_cols=92 Identities=20% Similarity=0.254 Sum_probs=61.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceec-CCC--cCCHHhhhc-----cC
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGT--LGDIYETIS-----GS 179 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~--~~~~~Eav~-----~A 179 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..+. +...+.+++.|.... +.. ..+..+.+. ..
T Consensus 193 ~g-~~VlV~GaG~vG~~a~q~a~~~------Ga~~Vi~~~~~-~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 193 PG-SNVAIFGLGTVGLAVAEGAKTA------GASRIIGIDID-SKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHH------TCSCEEEECSC-TTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcCC-HHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCC
Confidence 56 8999999999999999999988 88 66554434 456788999887421 100 122333332 48
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCC-cEEEEe
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~G-aiL~~a 211 (417)
|+||-++... +.++.....+++| -.++..
T Consensus 265 D~vid~~g~~---~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 265 DYSFECIGNV---SVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCH---HHHHHHHHHhhccCCEEEEE
Confidence 9999998863 3345556677774 555544
No 381
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=93.63 E-value=0.19 Score=49.84 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=48.4
Q ss_pred ccCCCCEEEEEcccc-hHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHHH----HHHcC--ceecCCCcCCHHhh
Q 014863 107 AFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAG--FTEENGTLGDIYET 175 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~-mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~~----A~~~G--~~~~d~~~~~~~Ea 175 (417)
.|+| .||++||=|+ +..|++..+... |.+|.+..... ..-.+. |.+.| +.. ..+++|+
T Consensus 152 ~l~g-l~va~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~----~~d~~ea 220 (321)
T 1oth_A 152 SLKG-LTLSWIGDGNNILHSIMMSAAKF------GMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLL----TNDPLEA 220 (321)
T ss_dssp CCTT-CEEEEESCSSHHHHHHHTTTGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEE----ESCHHHH
T ss_pred CcCC-cEEEEECCchhhHHHHHHHHHHc------CCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EECHHHH
Confidence 5789 9999999864 777777777666 88887765442 111222 22455 333 5789999
Q ss_pred hccCCeEEEee
Q 014863 176 ISGSDLVLLLI 186 (417)
Q Consensus 176 v~~ADiViLav 186 (417)
+++||+|+.-+
T Consensus 221 v~~aDvvy~d~ 231 (321)
T 1oth_A 221 AHGGNVLITDT 231 (321)
T ss_dssp HTTCSEEEECC
T ss_pred hccCCEEEEec
Confidence 99999999965
No 382
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=93.59 E-value=0.15 Score=50.04 Aligned_cols=72 Identities=21% Similarity=0.124 Sum_probs=42.4
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH--cC-c--eecCCCcCCHHhhhccCCeEEEe
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA--AG-F--TEENGTLGDIYETISGSDLVLLL 185 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~--~G-~--~~~d~~~~~~~Eav~~ADiViLa 185 (417)
|||+||| .|.+|.+++..|.... +...++++.+... +....+.+ .. . ....-...+..+++++||+||++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~---~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ 76 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQL---PSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLIS 76 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHS---CTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEe
Confidence 6899999 8999999999986530 1123555555443 22222221 11 1 11000002456789999999998
Q ss_pred ec
Q 014863 186 IS 187 (417)
Q Consensus 186 vp 187 (417)
..
T Consensus 77 ag 78 (312)
T 3hhp_A 77 AG 78 (312)
T ss_dssp CS
T ss_pred CC
Confidence 74
No 383
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.55 E-value=0.081 Score=47.36 Aligned_cols=71 Identities=18% Similarity=0.258 Sum_probs=48.2
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC---HHhhhccCCeEEEee
Q 014863 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLI 186 (417)
Q Consensus 111 ~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~Eav~~ADiViLav 186 (417)
||||.|+| .|.+|.++++.|.+. |++|++..|...+.... ..++......+.+ ..++++++|+||.+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 75 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR------GFEVTAVVRHPEKIKIE--NEHLKVKKADVSSLDEVCEVCKGADAVISAF 75 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT------TCEEEEECSCGGGCCCC--CTTEEEECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC------CCEEEEEEcCcccchhc--cCceEEEEecCCCHHHHHHHhcCCCEEEEeC
Confidence 58999999 699999999999999 99988877764332111 1232211111233 446788999999998
Q ss_pred cch
Q 014863 187 SDA 189 (417)
Q Consensus 187 pd~ 189 (417)
.+.
T Consensus 76 ~~~ 78 (227)
T 3dhn_A 76 NPG 78 (227)
T ss_dssp CC-
T ss_pred cCC
Confidence 654
No 384
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.52 E-value=0.18 Score=47.25 Aligned_cols=73 Identities=14% Similarity=0.147 Sum_probs=49.3
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCch----hHHH---HHHcCceecCCCcCC---HHhhhccC
Q 014863 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR----SFAE---ARAAGFTEENGTLGD---IYETISGS 179 (417)
Q Consensus 111 ~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~----s~~~---A~~~G~~~~d~~~~~---~~Eav~~A 179 (417)
+|+|.|+| .|.+|.++++.|.+. |++|++..|..+. ..+. ....|+......+.+ +.++++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 77 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL------GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQV 77 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC------CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCC
Confidence 37899999 599999999999998 9988877776321 1111 123454322112333 45678899
Q ss_pred CeEEEeecch
Q 014863 180 DLVLLLISDA 189 (417)
Q Consensus 180 DiViLavpd~ 189 (417)
|+||.+....
T Consensus 78 d~vi~~a~~~ 87 (313)
T 1qyd_A 78 DVVISALAGG 87 (313)
T ss_dssp SEEEECCCCS
T ss_pred CEEEECCccc
Confidence 9999988643
No 385
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=93.50 E-value=0.12 Score=50.99 Aligned_cols=72 Identities=18% Similarity=0.199 Sum_probs=53.8
Q ss_pred ccCCCCEEEEEcc---cchHHHHHHHHHhhhhhhcCCceEEEEecC----CchhHHHHHHcCceecCCCcCCHHhhhccC
Q 014863 107 AFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAAGFTEENGTLGDIYETISGS 179 (417)
Q Consensus 107 ~l~g~kkIgIIG~---G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~----~~~s~~~A~~~G~~~~d~~~~~~~Eav~~A 179 (417)
.|+| .||++||= |++..|++..+... |.+|.+.... +....+.+++.|.... ...+++|++++|
T Consensus 152 ~l~g-l~va~vGD~~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~a 222 (308)
T 1ml4_A 152 RIDG-LKIGLLGDLKYGRTVHSLAEALTFY------DVELYLISPELLRMPRHIVEELREKGMKVV--ETTTLEDVIGKL 222 (308)
T ss_dssp CSSS-EEEEEESCTTTCHHHHHHHHHGGGS------CEEEEEECCGGGCCCHHHHHHHHHTTCCEE--EESCTHHHHTTC
T ss_pred CCCC-eEEEEeCCCCcCchHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHcCCeEE--EEcCHHHHhcCC
Confidence 5788 99999997 48999999999887 9988776543 2233456666675321 146899999999
Q ss_pred CeEEEeec
Q 014863 180 DLVLLLIS 187 (417)
Q Consensus 180 DiViLavp 187 (417)
|+|+..+=
T Consensus 223 Dvvyt~~~ 230 (308)
T 1ml4_A 223 DVLYVTRI 230 (308)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99998663
No 386
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.50 E-value=0.24 Score=50.83 Aligned_cols=95 Identities=12% Similarity=0.181 Sum_probs=65.2
Q ss_pred cccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcC--ceecCCCcCCHH
Q 014863 106 DAFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--FTEENGTLGDIY 173 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G----------~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G--~~~~d~~~~~~~ 173 (417)
..++| +||+|.|+- +-...++..|.+. |.+|.+++..-.+ +.....| +.. +.+.+
T Consensus 314 ~~~~~-~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~------g~~v~~~DP~~~~--~~~~~~~~~~~~----~~~~~ 380 (450)
T 3gg2_A 314 GNVQG-RCVAIWGLSFKPGTDDMREAPSLVLIEKLLEV------GCRVRVYDPVAMK--EAQKRLGDKVEY----TTDMY 380 (450)
T ss_dssp TCCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSCHH--HHHHHHGGGSEE----CSSHH
T ss_pred ccCCC-CEEEEEeeeeCCCCcccccChHHHHHHHHHHC------CCEEEEECCCCcH--HHHHhcCcccee----cCCHH
Confidence 35688 999999984 4467888888888 9988776543221 1112233 443 46788
Q ss_pred hhhccCCeEEEeecchhHHH-HHHHHHhcCCCCcEEEEeccc
Q 014863 174 ETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 174 Eav~~ADiViLavpd~a~~~-Vl~eI~p~Lk~GaiL~~a~G~ 214 (417)
++++++|.|+++|.-....+ -++.+...|+ +.+|+|.-++
T Consensus 381 ~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~-~~~i~D~r~~ 421 (450)
T 3gg2_A 381 DAVRGAEALFHVTEWKEFRMPDWSALSQAMA-ASLVIDGRNV 421 (450)
T ss_dssp HHTTTCSCEEECSCCGGGSSCCHHHHHHHSS-SCEEEESSCC
T ss_pred HHhcCCCEEEEccCCHHHhhcCHHHHHHhcC-CCEEEECCCC
Confidence 99999999999999776643 2456666675 4577776654
No 387
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.47 E-value=0.19 Score=48.23 Aligned_cols=81 Identities=16% Similarity=0.163 Sum_probs=53.8
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHH------HHHHcCceecCCCcCC---HHhhhc--cC
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFA------EARAAGFTEENGTLGD---IYETIS--GS 179 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~------~A~~~G~~~~d~~~~~---~~Eav~--~A 179 (417)
++|.|+|. |.+|.++++.|.+. |++|++..|......+ .....|+......+.+ ..++++ ++
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDA------HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHT------TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred CeEEEECCCcHHHHHHHHHHHHC------CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCC
Confidence 78999997 99999999999998 9988888876421111 1123455432222333 345777 99
Q ss_pred CeEEEeecchhH---HHHHHHH
Q 014863 180 DLVLLLISDAAQ---ADNYEKI 198 (417)
Q Consensus 180 DiViLavpd~a~---~~Vl~eI 198 (417)
|+||.+...... ..+++.+
T Consensus 85 d~Vi~~a~~~n~~~~~~l~~aa 106 (346)
T 3i6i_A 85 DIVVSTVGGESILDQIALVKAM 106 (346)
T ss_dssp CEEEECCCGGGGGGHHHHHHHH
T ss_pred CEEEECCchhhHHHHHHHHHHH
Confidence 999999886422 3455443
No 388
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.46 E-value=0.36 Score=46.97 Aligned_cols=92 Identities=15% Similarity=0.096 Sum_probs=60.2
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCc-CC-HHh---hh-----c
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GD-IYE---TI-----S 177 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~-~~-~~E---av-----~ 177 (417)
.| ++|.|+|.|.+|...++-++.. |.+|++..+ +.+..+.+++.|.... +... .+ .++ .. .
T Consensus 168 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 168 LG-TTVLVIGAGPIGLVSVLAAKAY------GAFVVCTAR-SPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEES-CHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEcC-CHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCC
Confidence 57 8999999999999999988888 988655444 4555778888886320 1110 11 112 22 2
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 178 ~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
..|+||-++.... .++.....++++-.++..
T Consensus 240 g~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 240 LPNVTIDCSGNEK---CITIGINITRTGGTLMLV 270 (352)
T ss_dssp CCSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCCEEEECCCCHH---HHHHHHHHHhcCCEEEEE
Confidence 5899999997642 344455567776665544
No 389
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.39 E-value=0.11 Score=51.03 Aligned_cols=92 Identities=20% Similarity=0.219 Sum_probs=60.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh------ccCCe
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSDL 181 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav------~~ADi 181 (417)
.| ++|.|+|.|.+|...++-++.. |.+|++..+. .+..+.+++.|.... |....+..+.+ ...|+
T Consensus 189 ~g-~~VlV~G~G~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~ 260 (363)
T 3uog_A 189 AG-DRVVVQGTGGVALFGLQIAKAT------GAEVIVTSSS-REKLDRAFALGADHGINRLEEDWVERVYALTGDRGADH 260 (363)
T ss_dssp TT-CEEEEESSBHHHHHHHHHHHHT------TCEEEEEESC-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEecC-chhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceE
Confidence 46 8999999999999999999988 9987766554 455677888886421 11112333322 16899
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 182 ViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|+-++...... .....++++-.++..+
T Consensus 261 vid~~g~~~~~----~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 261 ILEIAGGAGLG----QSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEEETTSSCHH----HHHHHEEEEEEEEEEC
T ss_pred EEECCChHHHH----HHHHHhhcCCEEEEEe
Confidence 99999855433 3444566666555443
No 390
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=93.39 E-value=0.19 Score=48.83 Aligned_cols=91 Identities=19% Similarity=0.160 Sum_probs=62.4
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhh------ccCCe
Q 014863 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI------SGSDL 181 (417)
Q Consensus 109 ~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav------~~ADi 181 (417)
.| ++|.|+| .|.+|...++-++.. |.+|++. ++ ....+.+++.|....+ ...+..+.+ ...|+
T Consensus 150 ~g-~~VlV~Ga~g~iG~~~~q~a~~~------Ga~Vi~~-~~-~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 150 DG-QTVLIQGGGGGVGHVAIQIALAR------GARVFAT-AR-GSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEE-EC-HHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CC-CEEEEecCCCHHHHHHHHHHHHC------CCEEEEE-eC-HHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceE
Confidence 56 8999999 799999999999988 9887665 44 4457788888875322 122333333 26899
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 182 ViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
|+-++... .+......|+++-.++...+
T Consensus 220 vid~~g~~----~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 220 VYDTLGGP----VLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp EEESSCTH----HHHHHHHHEEEEEEEEESCC
T ss_pred EEECCCcH----HHHHHHHHHhcCCeEEEEcc
Confidence 99998853 44445556666666655543
No 391
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.31 E-value=0.33 Score=47.40 Aligned_cols=92 Identities=14% Similarity=0.107 Sum_probs=59.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceec-CCC---cCCHHhhh-----cc
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGT---LGDIYETI-----SG 178 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~---~~~~~Eav-----~~ 178 (417)
.| .+|.|+|.|.+|...++-++.. |. +|++..+. +...+.+++.|.... +.. ..+..+.+ ..
T Consensus 171 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g 242 (356)
T 1pl8_A 171 LG-HKVLVCGAGPIGMVTLLVAKAM------GAAQVVVTDLS-ATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCK 242 (356)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESC-HHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCC-HHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCC
Confidence 57 8999999999999999988888 88 66655443 555778888886320 100 00111122 35
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 179 ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
.|+||-++.... .++.....++++-.++..
T Consensus 243 ~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 243 PEVTIECTGAEA---SIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp CSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCCChH---HHHHHHHHhcCCCEEEEE
Confidence 899999997532 344445567777665544
No 392
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=93.24 E-value=0.22 Score=49.86 Aligned_cols=88 Identities=13% Similarity=0.097 Sum_probs=54.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEe-cC-CchhHHHH-------------HHcCceecCCCcCCHHhh
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGL-RK-GSRSFAEA-------------RAAGFTEENGTLGDIYET 175 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~-r~-~~~s~~~A-------------~~~G~~~~d~~~~~~~Ea 175 (417)
.|||||| .|..|.-+.+-|.+. ...++.... ++ ..+..... .+.-+. ..+. +.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-----P~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~-----~~~~-~~ 76 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNH-----PYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK-----PTDP-KL 76 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-----SSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE-----ECCG-GG
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-----CCceEEEEECchhcCCChhHhcccccccccccccccceEE-----eCCH-HH
Confidence 5899999 699999999977554 123443322 22 12323221 111111 1122 34
Q ss_pred hccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 176 v~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
+.++|+||+|+|.....++.+.+. +.|..++|.++
T Consensus 77 ~~~vDvvf~a~p~~~s~~~a~~~~---~~G~~vIDlSa 111 (359)
T 4dpl_A 77 MDDVDIIFSPLPQGAAGPVEEQFA---KEGFPVISNSP 111 (359)
T ss_dssp CTTCCEEEECCCTTTHHHHHHHHH---HTTCEEEECSS
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HCCCEEEEcCC
Confidence 579999999999998888877654 46888887765
No 393
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=93.24 E-value=0.22 Score=49.86 Aligned_cols=88 Identities=13% Similarity=0.097 Sum_probs=54.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEe-cC-CchhHHHH-------------HHcCceecCCCcCCHHhh
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGL-RK-GSRSFAEA-------------RAAGFTEENGTLGDIYET 175 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~-r~-~~~s~~~A-------------~~~G~~~~d~~~~~~~Ea 175 (417)
.|||||| .|..|.-+.+-|.+. ...++.... ++ ..+..... .+.-+. ..+. +.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-----P~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~-----~~~~-~~ 76 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNH-----PYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK-----PTDP-KL 76 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-----SSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE-----ECCG-GG
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-----CCceEEEEECchhcCCChhHhcccccccccccccccceEE-----eCCH-HH
Confidence 5899999 699999999977554 123443322 22 12323221 111111 1122 34
Q ss_pred hccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 176 v~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
+.++|+||+|+|.....++.+.+. +.|..++|.++
T Consensus 77 ~~~vDvvf~a~p~~~s~~~a~~~~---~~G~~vIDlSa 111 (359)
T 4dpk_A 77 MDDVDIIFSPLPQGAAGPVEEQFA---KEGFPVISNSP 111 (359)
T ss_dssp CTTCCEEEECCCTTTHHHHHHHHH---HTTCEEEECSS
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HCCCEEEEcCC
Confidence 579999999999998888877654 46888887765
No 394
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=93.19 E-value=0.21 Score=50.36 Aligned_cols=70 Identities=13% Similarity=0.016 Sum_probs=49.8
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCceEEEEecCC------chhHH----HHHHcCceecCCCcCCHHh
Q 014863 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG------SRSFA----EARAAGFTEENGTLGDIYE 174 (417)
Q Consensus 107 ~l~g~kkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~------~~s~~----~A~~~G~~~~d~~~~~~~E 174 (417)
.|+| .||++||=+ +++.|++..+... |.++.+..... +.-.+ .+.+.|.... ...+++|
T Consensus 177 ~l~g-lkva~vGD~~nnva~Sl~~~~~~l------G~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~--~~~d~~e 247 (365)
T 4amu_A 177 NLKN-KKIVFIGDYKNNVGVSTMIGAAFN------GMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLR--FSTDKIL 247 (365)
T ss_dssp SCTT-CEEEEESSTTSHHHHHHHHHHHHT------TCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEE--EESCHHH
T ss_pred CCCC-CEEEEECCCCcchHHHHHHHHHHc------CCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEE--EECCHHH
Confidence 4789 999999987 7889999888877 99887764432 11122 2445563221 1568999
Q ss_pred hhccCCeEEEe
Q 014863 175 TISGSDLVLLL 185 (417)
Q Consensus 175 av~~ADiViLa 185 (417)
++++||+|+.-
T Consensus 248 av~~aDVVytd 258 (365)
T 4amu_A 248 AAQDADVIYTD 258 (365)
T ss_dssp HTTTCSEEEEC
T ss_pred HhcCCCEEEec
Confidence 99999999984
No 395
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=93.17 E-value=0.22 Score=49.49 Aligned_cols=70 Identities=14% Similarity=0.083 Sum_probs=49.7
Q ss_pred ccCCCCEEEEEccc--chHHHHHHHHHhhhhhhcCCceEEEEecCCch------hHHHHH----H--cCceecCCCcCCH
Q 014863 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR------SFAEAR----A--AGFTEENGTLGDI 172 (417)
Q Consensus 107 ~l~g~kkIgIIG~G--~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~------s~~~A~----~--~G~~~~d~~~~~~ 172 (417)
.++| .||++||=| ++..|++..+... |.++.+....+-. ..+.++ + .|.... ...++
T Consensus 158 ~l~g-l~va~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~--~~~d~ 228 (328)
T 3grf_A 158 GFKG-IKFAYCGDSMNNVTYDLMRGCALL------GMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIK--IFHDC 228 (328)
T ss_dssp TGGG-CCEEEESCCSSHHHHHHHHHHHHH------TCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEE--EESSH
T ss_pred ccCC-cEEEEeCCCCcchHHHHHHHHHHc------CCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEE--EEcCH
Confidence 6889 999999975 8899999999888 9988776543221 223333 3 463211 15789
Q ss_pred HhhhccCCeEEEe
Q 014863 173 YETISGSDLVLLL 185 (417)
Q Consensus 173 ~Eav~~ADiViLa 185 (417)
+|++++||+|+.-
T Consensus 229 ~eav~~aDvvytd 241 (328)
T 3grf_A 229 KKGCEGVDVVYTD 241 (328)
T ss_dssp HHHHTTCSEEEEC
T ss_pred HHHhcCCCEEEec
Confidence 9999999999863
No 396
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.17 E-value=0.15 Score=53.07 Aligned_cols=89 Identities=17% Similarity=0.165 Sum_probs=56.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC-H-HhhhccCCeEEEeecch
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-I-YETISGSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~-~-~Eav~~ADiViLavpd~ 189 (417)
++|.|||+|..|..+|+.|.+. |++|++.+..... .+.+. -+...|.+-.+ + +.-+++||.++++++++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~d~~~-~~~~~--~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d 419 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK------PVPFILIDRQESP-VCNDH--VVVYGDATVGQTLRQAGIDRASGIIVTTNDD 419 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCS-SCCSS--CEEESCSSSSTHHHHHTTTSCSEEEECCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHC------CCCEEEEECChHH-HhhcC--CEEEeCCCCHHHHHhcCccccCEEEEECCCc
Confidence 6799999999999999999998 9988777655333 22221 22221211111 1 23478999999999987
Q ss_pred hHHHHHHHHHhcCCCC-cEEE
Q 014863 190 AQADNYEKIFSCMKPN-SILG 209 (417)
Q Consensus 190 a~~~Vl~eI~p~Lk~G-aiL~ 209 (417)
..--+.-.++..+.+. .+|.
T Consensus 420 ~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 420 STNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp HHHHHHHHHHHHHCSSSEEEE
T ss_pred hHHHHHHHHHHHHCCCCEEEE
Confidence 5433333444445554 4454
No 397
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=93.14 E-value=0.35 Score=45.19 Aligned_cols=71 Identities=23% Similarity=0.303 Sum_probs=48.9
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCC-ceEEEEecCCchhH-HHHHHcCceecCCCcCC---HHhhhccCCeEEEe
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSF-AEARAAGFTEENGTLGD---IYETISGSDLVLLL 185 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G-~~Vivg~r~~~~s~-~~A~~~G~~~~d~~~~~---~~Eav~~ADiViLa 185 (417)
|+|.|.|. |.+|.++++.|.+. | ++|++..|...+.. +.....|+......+.+ ..++++++|+||.+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~------g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLED------GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhc------CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 78999997 99999999999998 8 88888777643321 22223454321111333 44678899999998
Q ss_pred ecc
Q 014863 186 ISD 188 (417)
Q Consensus 186 vpd 188 (417)
...
T Consensus 80 a~~ 82 (299)
T 2wm3_A 80 TNY 82 (299)
T ss_dssp CCH
T ss_pred CCC
Confidence 763
No 398
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=93.13 E-value=0.098 Score=51.19 Aligned_cols=70 Identities=13% Similarity=-0.013 Sum_probs=52.3
Q ss_pred ccCCCCEEEEEcc---cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 014863 107 AFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 107 ~l~g~kkIgIIG~---G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiVi 183 (417)
.|+| .||++||= +++..|++..+... |.+|.+...+.-.-.. ..+.|+.. ..+++|++++||+|+
T Consensus 143 ~l~g-l~va~vGDl~~~rva~Sl~~~~~~~------g~~v~~~~P~~~~p~~-~~~~g~~~----~~d~~eav~~aDvvy 210 (291)
T 3d6n_B 143 EVKD-LRVLYVGDIKHSRVFRSGAPLLNMF------GAKIGVCGPKTLIPRD-VEVFKVDV----FDDVDKGIDWADVVI 210 (291)
T ss_dssp CCTT-CEEEEESCCTTCHHHHHHHHHHHHT------TCEEEEESCGGGSCTT-GGGGCEEE----ESSHHHHHHHCSEEE
T ss_pred CcCC-cEEEEECCCCCCchHHHHHHHHHHC------CCEEEEECCchhCCch-HHHCCCEE----EcCHHHHhCCCCEEE
Confidence 5789 99999997 89999999999988 9988776543211001 12457654 578999999999999
Q ss_pred Eeecch
Q 014863 184 LLISDA 189 (417)
Q Consensus 184 Lavpd~ 189 (417)
. +-.+
T Consensus 211 ~-~~~q 215 (291)
T 3d6n_B 211 W-LRLQ 215 (291)
T ss_dssp E-CCCC
T ss_pred E-eCcc
Confidence 8 6543
No 399
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.11 E-value=0.39 Score=49.25 Aligned_cols=87 Identities=13% Similarity=0.077 Sum_probs=57.1
Q ss_pred ccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-cCceecCCCcCCHHhhhccC
Q 014863 101 FNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGDIYETISGS 179 (417)
Q Consensus 101 f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-~G~~~~d~~~~~~~Eav~~A 179 (417)
||.. -.++| ++|.|||.|..|.+-++.|.+. |.+|.+......+..+...+ .++....+. .+ .+-+.++
T Consensus 4 ~P~~-~~l~~-~~vlVvGgG~va~~k~~~L~~~------ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~-~~-~~~l~~~ 73 (457)
T 1pjq_A 4 LPIF-CQLRD-RDCLIVGGGDVAERKARLLLEA------GARLTVNALTFIPQFTVWANEGMLTLVEGP-FD-ETLLDSC 73 (457)
T ss_dssp EEEE-ECCBT-CEEEEECCSHHHHHHHHHHHHT------TBEEEEEESSCCHHHHHHHTTTSCEEEESS-CC-GGGGTTC
T ss_pred eeeE-EECCC-CEEEEECCCHHHHHHHHHHHhC------cCEEEEEcCCCCHHHHHHHhcCCEEEEECC-CC-ccccCCc
Confidence 4433 45789 9999999999999999999999 99888776543333333222 334321111 12 2346789
Q ss_pred CeEEEeecchhH-HHHHHH
Q 014863 180 DLVLLLISDAAQ-ADNYEK 197 (417)
Q Consensus 180 DiViLavpd~a~-~~Vl~e 197 (417)
|+||.++.+... ..++..
T Consensus 74 ~lVi~at~~~~~n~~i~~~ 92 (457)
T 1pjq_A 74 WLAIAATDDDTVNQRVSDA 92 (457)
T ss_dssp SEEEECCSCHHHHHHHHHH
T ss_pred cEEEEcCCCHHHHHHHHHH
Confidence 999998887754 345543
No 400
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.05 E-value=0.34 Score=46.95 Aligned_cols=92 Identities=13% Similarity=0.158 Sum_probs=60.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh----ccCCeEE
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI----SGSDLVL 183 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav----~~ADiVi 183 (417)
.| ++|.|+|.|.+|...++-++.. |.+|++..++ ....+.+++.|.... |....+..+.+ ...|+||
T Consensus 164 ~g-~~VlV~GaG~vG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vi 235 (339)
T 1rjw_A 164 PG-EWVAIYGIGGLGHVAVQYAKAM------GLNVVAVDIG-DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAV 235 (339)
T ss_dssp TT-CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEE
Confidence 56 8999999999999999999988 9887665544 555677788886321 11111332322 4689999
Q ss_pred EeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 184 LLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 184 Lavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
-++... ..++.....++++-.++..
T Consensus 236 d~~g~~---~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 236 VTAVSK---PAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp ESSCCH---HHHHHHHHHEEEEEEEEEC
T ss_pred ECCCCH---HHHHHHHHHhhcCCEEEEe
Confidence 998752 2344445566666555543
No 401
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=92.94 E-value=0.17 Score=50.72 Aligned_cols=91 Identities=13% Similarity=0.102 Sum_probs=52.4
Q ss_pred CCEEEEEc-ccchHHHHHHH-HHhhhhhhcCCc---eEEEE-ecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 014863 111 INQIGVIG-WGSQGPAQAQN-LRDSLAEAKSDI---VVKVG-LRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 111 ~kkIgIIG-~G~mG~AiA~~-Lr~s~~~~~~G~---~Vivg-~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViL 184 (417)
|+||+|+| .|.+|..+.+. |.+. ++ .+... .++..+............. ...+.++ .+++|+||.
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~------~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~--~~~~~~~-~~~~DvVf~ 71 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEER------DFDAIRPVFFSTSQLGQAAPSFGGTTGTLQ--DAFDLEA-LKALDIIVT 71 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT------GGGGSEEEEEESSSTTSBCCGGGTCCCBCE--ETTCHHH-HHTCSEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcC------CCCeEEEEEEEeCCCCCCccccCCCceEEE--ecCChHH-hcCCCEEEE
Confidence 57999999 99999999994 4433 32 33222 2221111100000111110 0123333 578999999
Q ss_pred eecchhHHHHHHHHHhcCCCCc--EEEEecc
Q 014863 185 LISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~Ga--iL~~a~G 213 (417)
|+|.....+..+.+.. .|. +|++.++
T Consensus 72 a~g~~~s~~~a~~~~~---~G~k~vVID~ss 99 (367)
T 1t4b_A 72 CQGGDYTNEIYPKLRE---SGWQGYWIDAAS 99 (367)
T ss_dssp CSCHHHHHHHHHHHHH---TTCCCEEEECSS
T ss_pred CCCchhHHHHHHHHHH---CCCCEEEEcCCh
Confidence 9998888887776543 454 6777665
No 402
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.91 E-value=0.12 Score=49.24 Aligned_cols=90 Identities=21% Similarity=0.188 Sum_probs=59.9
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCc-CCHHhhhccCCeEEEe
Q 014863 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GDIYETISGSDLVLLL 185 (417)
Q Consensus 109 ~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~-~~~~Eav~~ADiViLa 185 (417)
.| ++|.|+|. |.+|...++-++.. |.+|++..++ .+..+.+++.|.... +... .+..+.+...|+|+-
T Consensus 125 ~g-~~vlV~Ga~G~vG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid- 195 (302)
T 1iz0_A 125 PG-EKVLVQAAAGALGTAAVQVARAM------GLRVLAAASR-PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE- 195 (302)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESS-GGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-
Confidence 46 89999998 99999999999888 9887766654 344567777786420 0000 112233467899998
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+... .++.....++++-.++..
T Consensus 196 ~g~~----~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 196 VRGK----EVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp CSCT----THHHHHTTEEEEEEEEEC
T ss_pred CCHH----HHHHHHHhhccCCEEEEE
Confidence 7763 445556677776655544
No 403
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=92.91 E-value=0.46 Score=46.53 Aligned_cols=93 Identities=12% Similarity=0.019 Sum_probs=58.9
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc----Cc---eecCCCcCCHHhh-hc
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GF---TEENGTLGDIYET-IS 177 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~----G~---~~~d~~~~~~~Ea-v~ 177 (417)
..-.| ++|..||+|..|.+...-.+.. |.+| ++.+.++...+.|++. |. ... ..+..+. -.
T Consensus 119 ~l~~g-~rVLDIGcG~G~~ta~~lA~~~------ga~V-~gIDis~~~l~~Ar~~~~~~gl~~v~~v---~gDa~~l~d~ 187 (298)
T 3fpf_A 119 RFRRG-ERAVFIGGGPLPLTGILLSHVY------GMRV-NVVEIEPDIAELSRKVIEGLGVDGVNVI---TGDETVIDGL 187 (298)
T ss_dssp TCCTT-CEEEEECCCSSCHHHHHHHHTT------CCEE-EEEESSHHHHHHHHHHHHHHTCCSEEEE---ESCGGGGGGC
T ss_pred CCCCc-CEEEEECCCccHHHHHHHHHcc------CCEE-EEEECCHHHHHHHHHHHHhcCCCCeEEE---ECchhhCCCC
Confidence 34567 9999999999765533222223 6665 5666666666666543 43 111 1233332 14
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 014863 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 178 ~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
..|+|++..-.....++++++...|+||..|+
T Consensus 188 ~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 188 EFDVLMVAALAEPKRRVFRNIHRYVDTETRII 219 (298)
T ss_dssp CCSEEEECTTCSCHHHHHHHHHHHCCTTCEEE
T ss_pred CcCEEEECCCccCHHHHHHHHHHHcCCCcEEE
Confidence 67999987654455689999999999998765
No 404
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.87 E-value=0.31 Score=47.09 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=32.3
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecC
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~ 149 (417)
-.++| ++|.|||.|..|..-++.|.+. |.+|+|....
T Consensus 9 ~~l~~-k~VLVVGgG~va~rka~~Ll~~------Ga~VtViap~ 45 (274)
T 1kyq_A 9 HQLKD-KRILLIGGGEVGLTRLYKLMPT------GCKLTLVSPD 45 (274)
T ss_dssp ECCTT-CEEEEEEESHHHHHHHHHHGGG------TCEEEEEEEE
T ss_pred EEcCC-CEEEEECCcHHHHHHHHHHHhC------CCEEEEEcCC
Confidence 46789 9999999999999999999999 9988776543
No 405
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.84 E-value=1 Score=46.24 Aligned_cols=96 Identities=19% Similarity=0.151 Sum_probs=64.6
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcC-ceecCCCcCC----HHhhhccCCeEEEee
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLGD----IYETISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G-~~~~d~~~~~----~~Eav~~ADiViLav 186 (417)
++|.|+|.|++|..+|+.|.+ +++|.+-.+...+....+.+.- ..+.++...+ .++-+.++|+++-+|
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~-------~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T 308 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQ-------TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALT 308 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECC
T ss_pred cEEEEEcchHHHHHHHHHhhh-------cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcc
Confidence 899999999999999999854 5677777766556556666542 2221222233 235689999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEeccc
Q 014863 187 SDAAQADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 187 pd~a~~~Vl~eI~p~Lk~GaiL~~a~G~ 214 (417)
.++..-=+..-++..+...+++..+.-.
T Consensus 309 ~~De~Ni~~~llAk~~gv~kvIa~vn~~ 336 (461)
T 4g65_A 309 NEDETNIMSAMLAKRMGAKKVMVLIQRG 336 (461)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECSCH
T ss_pred cCcHHHHHHHHHHHHcCCcccccccccc
Confidence 9876543444556667666677766543
No 406
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=92.84 E-value=0.36 Score=46.07 Aligned_cols=74 Identities=19% Similarity=0.145 Sum_probs=49.9
Q ss_pred ccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHH---HHH-------cCceecCCCcCC---H
Q 014863 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE---ARA-------AGFTEENGTLGD---I 172 (417)
Q Consensus 107 ~l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~---A~~-------~G~~~~d~~~~~---~ 172 (417)
.+++ |+|.|.| .|-+|.++++.|.+. |++|++..|........ ... .++......+.+ .
T Consensus 22 ~~~~-~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 94 (351)
T 3ruf_A 22 IFSP-KTWLITGVAGFIGSNLLEKLLKL------NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTC 94 (351)
T ss_dssp HHSC-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHH
T ss_pred CCCC-CeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHH
Confidence 4566 9999999 599999999999999 99988877754322222 111 233321111233 4
Q ss_pred HhhhccCCeEEEeec
Q 014863 173 YETISGSDLVLLLIS 187 (417)
Q Consensus 173 ~Eav~~ADiViLavp 187 (417)
.++++++|+||.+..
T Consensus 95 ~~~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 95 EQVMKGVDHVLHQAA 109 (351)
T ss_dssp HHHTTTCSEEEECCC
T ss_pred HHHhcCCCEEEECCc
Confidence 467889999998875
No 407
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.80 E-value=0.2 Score=48.28 Aligned_cols=93 Identities=15% Similarity=0.143 Sum_probs=62.6
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh------ccC
Q 014863 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGS 179 (417)
Q Consensus 108 l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav------~~A 179 (417)
-.| ++|.|+| .|.+|.+.++-++.. |.+|++..++ .+..+.+++.|.... +....+..+.+ ...
T Consensus 147 ~~g-~~vlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKG-DYVLLFAAAGGVGLILNQLLKMK------GAHTIAVAST-DEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTT-CEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCc
Confidence 356 8999999 899999999999988 9988766654 455678888886421 11112333322 258
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|+|+-++... .++.....++++-.++..+
T Consensus 219 D~vid~~g~~----~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 219 DASFDSVGKD----TFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEECCGGG----GHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCChH----HHHHHHHHhccCCEEEEEc
Confidence 9999999864 3444455667766666544
No 408
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=92.72 E-value=0.39 Score=48.34 Aligned_cols=89 Identities=12% Similarity=0.095 Sum_probs=61.9
Q ss_pred cCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCH--------------
Q 014863 108 FNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI-------------- 172 (417)
Q Consensus 108 l~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~-------------- 172 (417)
-.| ++|.|+|. |.+|.+.++-++.. |.+|++..+. ....+.+++.|... +.+.
T Consensus 219 ~~g-~~VlV~GasG~iG~~a~qla~~~------Ga~vi~~~~~-~~~~~~~~~lGa~~----~i~~~~~~~~~~~~~~~~ 286 (447)
T 4a0s_A 219 KQG-DIVLIWGASGGLGSYAIQFVKNG------GGIPVAVVSS-AQKEAAVRALGCDL----VINRAELGITDDIADDPR 286 (447)
T ss_dssp CTT-CEEEETTTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCCC----EEEHHHHTCCTTGGGCHH
T ss_pred CCC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCCE----EEeccccccccccccccc
Confidence 356 89999998 99999999999988 9887776654 55577888888642 1111
Q ss_pred ---------Hhh----h-ccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 173 ---------YET----I-SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 173 ---------~Ea----v-~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
.+. . ...|+||-++... .++.....++++-.++..+
T Consensus 287 ~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~----~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 287 RVVETGRKLAKLVVEKAGREPDIVFEHTGRV----TFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCSEEEECSCHH----HHHHHHHHSCTTCEEEESC
T ss_pred ccchhhhHHHHHHHHHhCCCceEEEECCCch----HHHHHHHHHhcCCEEEEEe
Confidence 111 1 3589999998863 4455556777777666543
No 409
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.63 E-value=0.33 Score=47.65 Aligned_cols=93 Identities=15% Similarity=0.112 Sum_probs=62.2
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh-----ccCCe
Q 014863 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI-----SGSDL 181 (417)
Q Consensus 109 ~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav-----~~ADi 181 (417)
.| ++|.|+| .|.+|...++-++.. |.+|++..+. ....+.+++.|.... +....+..+.+ ...|+
T Consensus 163 ~g-~~VlV~Ga~G~iG~~~~q~a~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~ 234 (362)
T 2c0c_A 163 EG-KKVLVTAAAGGTGQFAMQLSKKA------KCHVIGTCSS-DEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDV 234 (362)
T ss_dssp TT-CEEEETTTTBTTHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred CC-CEEEEeCCCcHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCE
Confidence 56 8999999 799999999999988 9887666554 445677777886421 11112333333 25799
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 182 ViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
||-++... .++.....++++-.++..+.
T Consensus 235 vid~~g~~----~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 235 VYESVGGA----MFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEECSCTH----HHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCHH----HHHHHHHHHhcCCEEEEEeC
Confidence 99999863 45555566666666555443
No 410
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.63 E-value=0.23 Score=47.83 Aligned_cols=93 Identities=15% Similarity=0.154 Sum_probs=63.0
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHH-HHcCceec-CCCcCCHHhhhc-----cCC
Q 014863 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-RAAGFTEE-NGTLGDIYETIS-----GSD 180 (417)
Q Consensus 109 ~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A-~~~G~~~~-d~~~~~~~Eav~-----~AD 180 (417)
.| ++|.|+|. |.+|.+.++-++.. |.+|++..++ ....+.+ ++.|.... |....+..+.+. ..|
T Consensus 149 ~g-~~vlI~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 149 NG-ETVVISGAAGAVGSVAGQIARLK------GCRVVGIAGG-AEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCce
Confidence 56 89999998 99999999999988 9988766655 3445666 67776320 111123333332 489
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
+|+-++.. +.++.....++++-.++..+.
T Consensus 221 ~vi~~~g~----~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 221 VFFDNVGG----EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EEEESSCH----HHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCCc----chHHHHHHHHhhCCEEEEEee
Confidence 99998874 356666777888776665543
No 411
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.62 E-value=0.23 Score=47.71 Aligned_cols=93 Identities=14% Similarity=0.093 Sum_probs=62.6
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh------ccC
Q 014863 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGS 179 (417)
Q Consensus 108 l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav------~~A 179 (417)
-.| ++|.|+| .|.+|.+.++-++.. |.+|++..++ ....+.+++.|.... +....+..+.+ ...
T Consensus 139 ~~g-~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 139 KPG-EIILFHAAAGGVGSLACQWAKAL------GAKLIGTVSS-PEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CTT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCc
Confidence 356 8999999 899999999999988 9988766654 445677777775320 11112333332 258
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|+|+-++... .+....+.++++-.++..+
T Consensus 211 Dvvid~~g~~----~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVGQD----TWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSCGG----GHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCChH----HHHHHHHHhcCCCEEEEEe
Confidence 9999988863 3445566777776666544
No 412
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=92.62 E-value=0.3 Score=50.92 Aligned_cols=71 Identities=23% Similarity=0.083 Sum_probs=48.3
Q ss_pred cccCCCCEEEEEcccchHHH-HHHHHHhhhhhhcCCceEEEEecCCc-hhHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 014863 106 DAFNGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~A-iA~~Lr~s~~~~~~G~~Vivg~r~~~-~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiVi 183 (417)
-+|++ ++|-|||.|-.|.+ +|+-|++. |++|.+.+.... ...+..++.|+....+ .+.++...++|+||
T Consensus 15 ~~~~~-~~i~~iGiGg~Gms~lA~~l~~~------G~~V~~sD~~~~~~~~~~L~~~gi~~~~G--~~~~~~~~~~d~vV 85 (524)
T 3hn7_A 15 LYFQG-MHIHILGICGTFMGSLALLARAL------GHTVTGSDANIYPPMSTQLEQAGVTIEEG--YLIAHLQPAPDLVV 85 (524)
T ss_dssp ----C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCCCTTHHHHHHHTTCEEEES--CCGGGGCSCCSEEE
T ss_pred eeecC-CEEEEEEecHhhHHHHHHHHHhC------CCEEEEECCCCCcHHHHHHHHCCCEEECC--CCHHHcCCCCCEEE
Confidence 36777 99999999999996 78888888 999988776532 3345556678765211 23344446799999
Q ss_pred Ee
Q 014863 184 LL 185 (417)
Q Consensus 184 La 185 (417)
+.
T Consensus 86 ~S 87 (524)
T 3hn7_A 86 VG 87 (524)
T ss_dssp EC
T ss_pred EC
Confidence 84
No 413
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.52 E-value=0.14 Score=49.82 Aligned_cols=94 Identities=24% Similarity=0.276 Sum_probs=60.8
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhhc------cC
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GS 179 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav~------~A 179 (417)
-.| .+|.|+|.|.+|...++-++.. |. +|++ .+.+++..+.+++.|.... +....+..+.+. ..
T Consensus 165 ~~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~ 236 (352)
T 3fpc_A 165 KLG-DTVCVIGIGPVGLMSVAGANHL------GAGRIFA-VGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGV 236 (352)
T ss_dssp CTT-CCEEEECCSHHHHHHHHHHHTT------TCSSEEE-ECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc------CCcEEEE-ECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCC
Confidence 356 8999999999999999999888 88 5655 4444556788888887421 111122333221 48
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|+|+-++.... .++.....++++-.++..+
T Consensus 237 D~v~d~~g~~~---~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 237 DKVVIAGGDVH---TFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEEECSSCTT---HHHHHHHHEEEEEEEEECC
T ss_pred CEEEECCCChH---HHHHHHHHHhcCCEEEEec
Confidence 99999988632 3334444566666655443
No 414
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.52 E-value=0.3 Score=47.44 Aligned_cols=94 Identities=14% Similarity=0.199 Sum_probs=61.5
Q ss_pred CCCCEEEEE-cccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhh-----ccCCeE
Q 014863 109 NGINQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-----SGSDLV 182 (417)
Q Consensus 109 ~g~kkIgII-G~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav-----~~ADiV 182 (417)
+| ++|.|+ |.|.+|...++-++.. |.+|++..++ .+..+.+++.|....-....+..+.+ ...|+|
T Consensus 150 ~g-~~VlV~gg~G~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EG-KTLLIINGAGGVGSIATQIAKAY------GLRVITTASR-NETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TT-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEECCS-HHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEE
T ss_pred CC-CEEEEEcCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEE
Confidence 68 999999 7999999999999988 9887665543 55677888888642100011333333 248999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
+-++.... .++.....++++-.++...+
T Consensus 222 ~d~~g~~~---~~~~~~~~l~~~G~iv~~~~ 249 (346)
T 3fbg_A 222 FCTFNTDM---YYDDMIQLVKPRGHIATIVA 249 (346)
T ss_dssp EESSCHHH---HHHHHHHHEEEEEEEEESSC
T ss_pred EECCCchH---HHHHHHHHhccCCEEEEECC
Confidence 99887533 33444455666666554443
No 415
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=92.50 E-value=0.16 Score=48.99 Aligned_cols=80 Identities=14% Similarity=0.150 Sum_probs=46.7
Q ss_pred ccccccccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcC-C---HHhh
Q 014863 101 FNLLPDAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG-D---IYET 175 (417)
Q Consensus 101 f~~~~~~l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~-~---~~Ea 175 (417)
++.+...+++ |+|.|+| .|.+|..+++.|.+. .|++|++..|...+........++......+. + ..++
T Consensus 15 ~~~~~~~m~~-~~vlVtGatG~iG~~l~~~L~~~-----~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~ 88 (372)
T 3slg_A 15 QTQGPGSMKA-KKVLILGVNGFIGHHLSKRILET-----TDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYH 88 (372)
T ss_dssp --------CC-CEEEEESCSSHHHHHHHHHHHHH-----SSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHH
T ss_pred hhcCCcccCC-CEEEEECCCChHHHHHHHHHHhC-----CCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHH
Confidence 5556666777 9999999 699999999999875 15788877776443222221133332111122 2 3457
Q ss_pred hccCCeEEEee
Q 014863 176 ISGSDLVLLLI 186 (417)
Q Consensus 176 v~~ADiViLav 186 (417)
++++|+||.+.
T Consensus 89 ~~~~d~Vih~A 99 (372)
T 3slg_A 89 VKKCDVILPLV 99 (372)
T ss_dssp HHHCSEEEECB
T ss_pred hccCCEEEEcC
Confidence 78999999754
No 416
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=92.50 E-value=0.41 Score=45.83 Aligned_cols=74 Identities=19% Similarity=0.124 Sum_probs=49.2
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchh---HHHHH-------HcCceecCCCcCC---H
Q 014863 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS---FAEAR-------AAGFTEENGTLGD---I 172 (417)
Q Consensus 107 ~l~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s---~~~A~-------~~G~~~~d~~~~~---~ 172 (417)
.+++ |+|.|.|. |-+|.++++.|.+. |++|++..|..... .+... ..++......+.+ .
T Consensus 24 ~~~~-~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 96 (352)
T 1sb8_A 24 PAQP-KVWLITGVAGFIGSNLLETLLKL------DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDC 96 (352)
T ss_dssp HHSC-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHH
T ss_pred CccC-CeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHH
Confidence 3566 89999997 99999999999998 99988777754321 11111 1333211111233 4
Q ss_pred HhhhccCCeEEEeec
Q 014863 173 YETISGSDLVLLLIS 187 (417)
Q Consensus 173 ~Eav~~ADiViLavp 187 (417)
.+++++.|+||.+..
T Consensus 97 ~~~~~~~d~vih~A~ 111 (352)
T 1sb8_A 97 NNACAGVDYVLHQAA 111 (352)
T ss_dssp HHHHTTCSEEEECCS
T ss_pred HHHhcCCCEEEECCc
Confidence 467789999999875
No 417
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=92.46 E-value=0.66 Score=46.85 Aligned_cols=69 Identities=22% Similarity=0.162 Sum_probs=41.3
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc-----eEEEEecCCchh----HHHHH--HcCceec--C-CCcCCHHhhh
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI-----VVKVGLRKGSRS----FAEAR--AAGFTEE--N-GTLGDIYETI 176 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~-----~Vivg~r~~~~s----~~~A~--~~G~~~~--d-~~~~~~~Eav 176 (417)
.||+||| .|.+|.+++..|... ++ .+++.+-..... .-.+. .++..+. + ....+..+++
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~------~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~ 106 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASG------EVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVF 106 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHcC------CcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHh
Confidence 7999999 899999999999887 44 144433211221 11222 1222100 0 0123567889
Q ss_pred ccCCeEEEee
Q 014863 177 SGSDLVLLLI 186 (417)
Q Consensus 177 ~~ADiViLav 186 (417)
++||+||++-
T Consensus 107 ~daDvVVita 116 (375)
T 7mdh_A 107 EDVDWALLIG 116 (375)
T ss_dssp TTCSEEEECC
T ss_pred CCCCEEEEcC
Confidence 9999999964
No 418
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=92.45 E-value=0.34 Score=47.56 Aligned_cols=70 Identities=14% Similarity=0.040 Sum_probs=50.7
Q ss_pred ccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCc-hhHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 014863 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (417)
Q Consensus 107 ~l~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~-~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViL 184 (417)
.|+| .||++||= +++..|++..+... |.++.+...+.- ...+.....++.. ..+++|++++||+|+.
T Consensus 151 ~l~g-l~ia~vGD~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~~----~~d~~eav~~aDvvy~ 219 (301)
T 2ef0_A 151 GLAG-LEVAWVGDGNNVLNSLLEVAPLA------GLKVRVATPKGYEPDPGLLKRANAFF----THDPKEAALGAHALYT 219 (301)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHTCEE----ESCHHHHHTTCSEEEE
T ss_pred CcCC-cEEEEECCCchhHHHHHHHHHHc------CCEEEEECCchhcCCHHHHhhceeEE----ECCHHHHhcCCCEEEe
Confidence 5789 99999996 79999999999888 998877654421 1111111123554 5789999999999998
Q ss_pred eec
Q 014863 185 LIS 187 (417)
Q Consensus 185 avp 187 (417)
.+=
T Consensus 220 ~~~ 222 (301)
T 2ef0_A 220 DVW 222 (301)
T ss_dssp CCC
T ss_pred cCc
Confidence 554
No 419
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=92.45 E-value=0.18 Score=52.60 Aligned_cols=92 Identities=14% Similarity=0.169 Sum_probs=57.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCc---eEEEEecCCchhHHHHHHcCceecCCCc--CCH----HhhhccCCeE
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTL--GDI----YETISGSDLV 182 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~---~Vivg~r~~~~s~~~A~~~G~~~~d~~~--~~~----~Eav~~ADiV 182 (417)
+||.|||+|.||..++.-|.++. ++ +|++.+..... .+.....|+......+ .+. ++++++.|+|
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~-----dv~~~~I~vaD~~~~~-~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvV 87 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKF-----DIKPSQVTIIAAEGTK-VDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFL 87 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHB-----CCCGGGEEEEESSCCS-CCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCC-----CCceeEEEEeccchhh-hhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEE
Confidence 57999999999999999998761 33 56666644322 2333334543211111 222 3456667999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|.+.++.....+++.... .|...++.+
T Consensus 88 IN~s~~~~~l~Im~acle---aGv~YlDTa 114 (480)
T 2ph5_A 88 IDVSIGISSLALIILCNQ---KGALYINAA 114 (480)
T ss_dssp EECCSSSCHHHHHHHHHH---HTCEEEESS
T ss_pred EECCccccCHHHHHHHHH---cCCCEEECC
Confidence 999998877777765432 355555554
No 420
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=92.42 E-value=0.14 Score=50.60 Aligned_cols=90 Identities=11% Similarity=0.069 Sum_probs=54.6
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhc-CCceEEEEecCCc--hhHHHHHHcCceecCCCcCCH-HhhhccCCeEEEe
Q 014863 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAK-SDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDI-YETISGSDLVLLL 185 (417)
Q Consensus 111 ~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~-~G~~Vivg~r~~~--~s~~~A~~~G~~~~d~~~~~~-~Eav~~ADiViLa 185 (417)
|+||+|+| .|.+|..+.+.|.+. + ..++++...+..+ +... -.|... .+.+. .+...++|+||+|
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~----~~p~~elv~i~s~~~~G~~~~---~~~~~i---~~~~~~~~~~~~vDvVf~a 72 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQER----EFPVDELFLLASERSEGKTYR---FNGKTV---RVQNVEEFDWSQVHIALFS 72 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT----TCCEEEEEEEECTTTTTCEEE---ETTEEE---EEEEGGGCCGGGCSEEEEC
T ss_pred ccEEEEECCCCHHHHHHHHHHhcC----CCCCEEEEEEECCCCCCCcee---ecCcee---EEecCChHHhcCCCEEEEC
Confidence 37999999 999999999988765 0 0235544443211 1100 011110 01111 2244689999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
+|.....+..+.+. +.|..+++.++
T Consensus 73 ~g~~~s~~~a~~~~---~~G~~vId~s~ 97 (336)
T 2r00_A 73 AGGELSAKWAPIAA---EAGVVVIDNTS 97 (336)
T ss_dssp SCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CCchHHHHHHHHHH---HcCCEEEEcCC
Confidence 99988777776543 46777777665
No 421
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=92.42 E-value=0.3 Score=47.24 Aligned_cols=87 Identities=14% Similarity=0.175 Sum_probs=55.0
Q ss_pred ccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhcc
Q 014863 99 DLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG 178 (417)
Q Consensus 99 ~~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ 178 (417)
+.|....+..+| +||++||+ + +.+.+.+ .. +.++.+.+++.. .|..+ ....++++++
T Consensus 130 d~~~~~~~~~~g-~kV~vIG~--~-P~i~~~l-~~------~~~v~V~d~~p~--------~g~~p----~~~~e~ll~~ 186 (270)
T 2h1q_A 130 DPFIMSQNEVKG-KKVGVVGH--F-PHLESLL-EP------ICDLSILEWSPE--------EGDYP----LPASEFILPE 186 (270)
T ss_dssp CHHHHTTTTTTT-SEEEEESC--C-TTHHHHH-TT------TSEEEEEESSCC--------TTCEE----GGGHHHHGGG
T ss_pred cHHHHHHhhcCC-CEEEEECC--C-HHHHHHH-hC------CCCEEEEECCCC--------CCCCC----hHHHHHHhhc
Confidence 455544466788 99999999 4 5666644 45 678888877643 24433 2346678999
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 014863 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 179 ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
||+|++. --...-..++.|..+.++++.++
T Consensus 187 aD~viiT-GsTlvN~Ti~~lL~~~~~a~~vv 216 (270)
T 2h1q_A 187 CDYVYIT-CASVVDKTLPRLLELSRNARRIT 216 (270)
T ss_dssp CSEEEEE-THHHHHTCHHHHHHHTTTSSEEE
T ss_pred CCEEEEE-eeeeecCCHHHHHHhCccCCeEE
Confidence 9998864 33333345556666665554444
No 422
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.39 E-value=0.15 Score=50.41 Aligned_cols=90 Identities=19% Similarity=0.257 Sum_probs=59.6
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCC---HHhhhccCCeEEE
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGD---IYETISGSDLVLL 184 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~---~~Eav~~ADiViL 184 (417)
.| .+|.|+|.|.+|...++-++.. |.+|++..++ ++..+.+++.|.... + ..+ .+++....|+||-
T Consensus 194 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~Vi~~~~~-~~~~~~a~~lGa~~vi~--~~~~~~~~~~~~g~Dvvid 263 (369)
T 1uuf_A 194 PG-KKVGVVGIGGLGHMGIKLAHAM------GAHVVAFTTS-EAKREAAKALGADEVVN--SRNADEMAAHLKSFDFILN 263 (369)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESS-GGGHHHHHHHTCSEEEE--TTCHHHHHTTTTCEEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCcEEec--cccHHHHHHhhcCCCEEEE
Confidence 56 8999999999999999988888 9887655544 455777888886420 1 111 1222356899999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
++.... .++.....++++-.++..
T Consensus 264 ~~g~~~---~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 264 TVAAPH---NLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp CCSSCC---CHHHHHTTEEEEEEEEEC
T ss_pred CCCCHH---HHHHHHHHhccCCEEEEe
Confidence 988532 233445566666655544
No 423
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=92.37 E-value=0.14 Score=53.39 Aligned_cols=48 Identities=27% Similarity=0.344 Sum_probs=34.2
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcC
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG 161 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G 161 (417)
.++| +++.|+|.|-+|.+++..|.+. |.+|++.+|+.++..+.+.+.+
T Consensus 361 ~l~~-k~vlV~GaGGig~aia~~L~~~------G~~V~i~~R~~~~a~~la~~~~ 408 (523)
T 2o7s_A 361 PLAS-KTVVVIGAGGAGKALAYGAKEK------GAKVVIANRTYERALELAEAIG 408 (523)
T ss_dssp ------CEEEECCSHHHHHHHHHHHHH------CC-CEEEESSHHHHHHHHHHTT
T ss_pred ccCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHcC
Confidence 4677 8999999999999999999999 9888888887555455555543
No 424
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.36 E-value=0.21 Score=48.52 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=60.5
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhhc------cCC
Q 014863 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (417)
Q Consensus 109 ~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav~------~AD 180 (417)
.| ++|.|+|. |.+|.+.++-++.. |.+|++..++ .+..+.+++.|.... +.. .+..+.+. ..|
T Consensus 159 ~g-~~VlV~Gasg~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 159 AG-ETVLVLGAAGGIGTAAIQIAKGM------GAKVIAVVNR-TAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVD 229 (342)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-GGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCce
Confidence 56 89999998 99999999999988 9988766654 445677888776421 111 23333321 589
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+|+-++... .++.....++++-.++..
T Consensus 230 vvid~~g~~----~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 230 MVVDPIGGP----AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEESCC------CHHHHHHTEEEEEEEEEC
T ss_pred EEEECCchh----HHHHHHHhhcCCCEEEEE
Confidence 999998864 344555667776665544
No 425
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.35 E-value=0.4 Score=46.53 Aligned_cols=92 Identities=17% Similarity=0.057 Sum_probs=61.7
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCC-cCCHHhhhc-----cCC
Q 014863 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGT-LGDIYETIS-----GSD 180 (417)
Q Consensus 109 ~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~-~~~~~Eav~-----~AD 180 (417)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++.. ..+.+++.|.... |-. ..+..+.+. ..|
T Consensus 169 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------Ga~V~~~~~~~~-~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 169 AG-HWVAISGAAGGLGSLAVQYAKAM------GYRVLGIDGGEG-KEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECSTT-HHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CC-CEEEEECCCchHHHHHHHHHHHC------CCcEEEEcCCHH-HHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCC
Confidence 56 89999999 89999999999988 988877666543 4567777775310 111 123334443 479
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+||.++... +.++...+.|+++-.++..
T Consensus 241 ~vi~~~g~~---~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 241 GVINVSVSE---AAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp EEEECSSCH---HHHHHHTTSEEEEEEEEEC
T ss_pred EEEECCCcH---HHHHHHHHHHhcCCEEEEE
Confidence 999888742 3456666777776655544
No 426
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.34 E-value=0.28 Score=50.50 Aligned_cols=94 Identities=17% Similarity=0.263 Sum_probs=67.2
Q ss_pred cccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-c-CceecCCCcCCHH
Q 014863 106 DAFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-A-GFTEENGTLGDIY 173 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G----------~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-~-G~~~~d~~~~~~~ 173 (417)
..++| +||+|.|+- +-...++..|.+. |.+|.+++..- .+.+.. . ++.. +.+.+
T Consensus 318 ~~~~~-~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~------g~~v~~~DP~~---~~~~~~~~~~~~~----~~~~~ 383 (446)
T 4a7p_A 318 GDVRG-KTVGILGLTFKPNTDDMRDAPSLSIIAALQDA------GATVKAYDPEG---VEQASKMLTDVEF----VENPY 383 (446)
T ss_dssp SCCTT-CEEEEECCSSSTTSCCCTTCSHHHHHHHHHHT------SCEEEEECSSC---HHHHGGGCSSCCB----CSCHH
T ss_pred ccCCC-CEEEEEEEEeCCCCcccccChHHHHHHHHHHC------CCEEEEECCCC---CHhHHHhcCCceE----ecChh
Confidence 35788 999999997 7788999999998 99887765432 122222 2 4442 46788
Q ss_pred hhhccCCeEEEeecchhHHH-HHHHHHhcCCCCcEEEEeccc
Q 014863 174 ETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 174 Eav~~ADiViLavpd~a~~~-Vl~eI~p~Lk~GaiL~~a~G~ 214 (417)
|+++++|.|+++|.-....+ =++.+...|+. .+|+|.-++
T Consensus 384 ~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~-~~i~D~r~~ 424 (446)
T 4a7p_A 384 AAADGADALVIVTEWDAFRALDLTRIKNSLKS-PVLVDLRNI 424 (446)
T ss_dssp HHHTTBSEEEECSCCTTTTSCCHHHHHTTBSS-CBEECSSCC
T ss_pred HHhcCCCEEEEeeCCHHhhcCCHHHHHHhcCC-CEEEECCCC
Confidence 99999999999998766543 24567777754 577776654
No 427
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=92.26 E-value=0.21 Score=47.99 Aligned_cols=92 Identities=17% Similarity=0.157 Sum_probs=64.5
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCC-HHhhhccCCeEEE
Q 014863 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGD-IYETISGSDLVLL 184 (417)
Q Consensus 108 l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~-~~Eav~~ADiViL 184 (417)
-.| .+|.|+| .|.+|...++-++.. |.+|++..+ .+..+.+++.|.... +....+ ..+.+...|+|+-
T Consensus 151 ~~g-~~vlV~Ga~G~vG~~a~q~a~~~------Ga~vi~~~~--~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 151 KQG-DVVLIHAGAGGVGHLAIQLAKQK------GTTVITTAS--KRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp CTT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEEC--HHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEE
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHc------CCEEEEEec--cchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEE
Confidence 457 8999997 999999999999988 988765543 234778888887421 111223 5566678999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
++..... ......++++-.++...
T Consensus 222 ~~g~~~~----~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 222 LVGGDVG----IQSIDCLKETGCIVSVP 245 (321)
T ss_dssp SSCHHHH----HHHGGGEEEEEEEEECC
T ss_pred CCCcHHH----HHHHHhccCCCEEEEeC
Confidence 9986433 45566777776666544
No 428
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=92.25 E-value=0.35 Score=48.52 Aligned_cols=69 Identities=16% Similarity=0.114 Sum_probs=48.9
Q ss_pred ccCCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHHHHHHc--------CceecCCCcCCHH
Q 014863 107 AFNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEARAA--------GFTEENGTLGDIY 173 (417)
Q Consensus 107 ~l~g~kkIgIIG~G-~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~~A~~~--------G~~~~d~~~~~~~ 173 (417)
.|+| .||+|||=+ ++..|++..+... |.+|.+..... +...+.+.+. ++.. ..+++
T Consensus 185 ~l~g-lkva~vGD~~nva~Sl~~~l~~l------G~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~----~~d~~ 253 (353)
T 3sds_A 185 GLEG-LKIAWVGDANNVLFDLAIAATKM------GVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQ----TTVPE 253 (353)
T ss_dssp SCTT-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEE----ESCHH
T ss_pred ccCC-CEEEEECCCchHHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEE----ECCHH
Confidence 3689 999999965 6888888888777 99887765432 2223333332 3333 56899
Q ss_pred hhhccCCeEEEee
Q 014863 174 ETISGSDLVLLLI 186 (417)
Q Consensus 174 Eav~~ADiViLav 186 (417)
|++++||+|+.-+
T Consensus 254 eav~~aDVvytd~ 266 (353)
T 3sds_A 254 VAVKDADVIVTDT 266 (353)
T ss_dssp HHTTTCSEEEECC
T ss_pred HHhcCCCEEEeCC
Confidence 9999999998754
No 429
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.25 E-value=0.11 Score=50.76 Aligned_cols=94 Identities=19% Similarity=0.175 Sum_probs=60.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcC-CHHhhh-ccCCeEEEe
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLG-DIYETI-SGSDLVLLL 185 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~-~~~Eav-~~ADiViLa 185 (417)
.| .+|.|+|.|.+|...++-++.. |.+|++..++ .+..+.+++.|.... +.... +..+.+ ...|+||-+
T Consensus 179 ~g-~~VlV~GaG~vG~~~~qlak~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~ 250 (360)
T 1piw_A 179 PG-KKVGIVGLGGIGSMGTLISKAM------GAETYVISRS-SRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVC 250 (360)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESS-STTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEEC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCC-HHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEEC
Confidence 56 8999999999999999999888 9887665554 445677888886420 10011 222333 368999999
Q ss_pred ecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 186 ISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 186 vpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+.... ...++.....++++-.++..
T Consensus 251 ~g~~~-~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 251 ASSLT-DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp CSCST-TCCTTTGGGGEEEEEEEEEC
T ss_pred CCCCc-HHHHHHHHHHhcCCCEEEEe
Confidence 97510 01233445667776665544
No 430
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.21 E-value=0.34 Score=46.88 Aligned_cols=93 Identities=17% Similarity=0.127 Sum_probs=61.9
Q ss_pred cCCCCEEEEEccc-chHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh------ccC
Q 014863 108 FNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGS 179 (417)
Q Consensus 108 l~g~kkIgIIG~G-~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav------~~A 179 (417)
-+| ++|.|+|.| .+|...++-++.. |.+|++..++. +..+.+++.|.... +....+..+.+ ...
T Consensus 143 ~~g-~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~~-~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRN-DVLLVNACGSAIGHLFAQLSQIL------NFRLIAVTRNN-KHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESSS-TTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCC-CEEEEeCCccHHHHHHHHHHHHc------CCEEEEEeCCH-HHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCC
Confidence 356 899999998 8999999999888 99887766553 45677777776421 11112333332 258
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|+|+-++......+. ...++++-.++..+
T Consensus 215 Dvvid~~g~~~~~~~----~~~l~~~G~iv~~G 243 (340)
T 3gms_A 215 DAAIDSIGGPDGNEL----AFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEESSCHHHHHHH----HHTEEEEEEEEECC
T ss_pred cEEEECCCChhHHHH----HHHhcCCCEEEEEe
Confidence 999999886554333 35677766665543
No 431
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=92.21 E-value=0.16 Score=49.97 Aligned_cols=89 Identities=19% Similarity=0.156 Sum_probs=57.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHH-HcCceec-CCCcCC---HHhhhccCCeEE
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEE-NGTLGD---IYETISGSDLVL 183 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~-~~G~~~~-d~~~~~---~~Eav~~ADiVi 183 (417)
.| ++|.|+|.|.+|...++-++.. |.+|++..+.. ...+.+. +.|.... + ..+ ..++....|+||
T Consensus 187 ~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~-~~~~~~~~~lGa~~v~~--~~~~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PG-KHIGIVGLGGLGHVAVKFAKAF------GSKVTVISTSP-SKKEEALKNFGADSFLV--SRDQEQMQAAAGTLDGII 256 (366)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCG-GGHHHHHHTSCCSEEEE--TTCHHHHHHTTTCEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHhcCCceEEe--ccCHHHHHHhhCCCCEEE
Confidence 67 8999999999999999999988 98877666553 3455555 6775320 1 112 223335689999
Q ss_pred Eeecch-hHHHHHHHHHhcCCCCcEEEEe
Q 014863 184 LLISDA-AQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 184 Lavpd~-a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
-++... .....+ +.|+++-.++..
T Consensus 257 d~~g~~~~~~~~~----~~l~~~G~iv~~ 281 (366)
T 1yqd_A 257 DTVSAVHPLLPLF----GLLKSHGKLILV 281 (366)
T ss_dssp ECCSSCCCSHHHH----HHEEEEEEEEEC
T ss_pred ECCCcHHHHHHHH----HHHhcCCEEEEE
Confidence 998854 333333 445555555433
No 432
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=92.19 E-value=0.13 Score=51.00 Aligned_cols=68 Identities=24% Similarity=0.160 Sum_probs=44.2
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCC-chhHHHHHHcCceecCCCcCC---HHhhhccCCe
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFAEARAAGFTEENGTLGD---IYETISGSDL 181 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-~~s~~~A~~~G~~~~d~~~~~---~~Eav~~ADi 181 (417)
..+.| +||+|||.|.+|..+++.+++. |+++++.+... ......+ +.... ....+ +.+.++++|+
T Consensus 10 ~~~~~-k~IlIlG~G~~g~~la~aa~~~------G~~vi~~d~~~~~~~~~~a--d~~~~--~~~~d~~~l~~~~~~~dv 78 (389)
T 3q2o_A 10 IILPG-KTIGIIGGGQLGRMMALAAKEM------GYKIAVLDPTKNSPCAQVA--DIEIV--ASYDDLKAIQHLAEISDV 78 (389)
T ss_dssp CCCTT-SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSTTCTTTTTC--SEEEE--CCTTCHHHHHHHHHTCSE
T ss_pred cCCCC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeCCCCCchHHhC--CceEe--cCcCCHHHHHHHHHhCCE
Confidence 34678 9999999999999999999998 99987765432 1111111 11111 11223 4467788898
Q ss_pred EEE
Q 014863 182 VLL 184 (417)
Q Consensus 182 ViL 184 (417)
|..
T Consensus 79 I~~ 81 (389)
T 3q2o_A 79 VTY 81 (389)
T ss_dssp EEE
T ss_pred eee
Confidence 754
No 433
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.18 E-value=0.37 Score=46.27 Aligned_cols=92 Identities=17% Similarity=0.171 Sum_probs=61.3
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCc-CCHHhhhc-----cCC
Q 014863 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GDIYETIS-----GSD 180 (417)
Q Consensus 109 ~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~-~~~~Eav~-----~AD 180 (417)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++ ....+.+++.|.... |... .+..+.+. ..|
T Consensus 145 ~g-~~vlV~Ga~ggiG~~~~~~~~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 145 GG-ETVLVSAAAGAVGSVVGQIAKLK------GCKVVGAAGS-DEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SS-CEEEEESTTBHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CC-CEEEEecCCCcHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCe
Confidence 56 89999998 99999999999988 9988776654 344566677775210 1111 23333332 479
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+||.++... .++.....++++-.++..+
T Consensus 217 ~vi~~~g~~----~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 217 CYFDNVGGE----FLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEESSCHH----HHHHHHTTEEEEEEEEECC
T ss_pred EEEECCChH----HHHHHHHHHhcCCEEEEEe
Confidence 999888753 3556667777776665443
No 434
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=92.13 E-value=0.45 Score=47.65 Aligned_cols=99 Identities=17% Similarity=0.128 Sum_probs=54.6
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEec-C-CchhHHHHHHc----C------------ceecCC
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-K-GSRSFAEARAA----G------------FTEENG 167 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r-~-~~~s~~~A~~~----G------------~~~~d~ 167 (417)
+....|.||||+|+|.+|.-+.+.|.+. .+++|+..++ . +........+. | +.. ++
T Consensus 12 ~~~~~~ikVgI~G~G~iGr~llR~l~~~-----p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v-~g 85 (354)
T 3cps_A 12 ENLYFQGTLGINGFGRIGRLVLRACMER-----NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCI-NG 85 (354)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHTC-----SSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEE-TT
T ss_pred cCcCcceEEEEECCCHHHHHHHHHHHcC-----CCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEE-CC
Confidence 3444557999999999999999988765 1467655554 2 22111121111 1 000 00
Q ss_pred ----C--cCCHHhhh---ccCCeEEEeecchhHHHHHHHHHhcCCCCc--EEEEecc
Q 014863 168 ----T--LGDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (417)
Q Consensus 168 ----~--~~~~~Eav---~~ADiViLavpd~a~~~Vl~eI~p~Lk~Ga--iL~~a~G 213 (417)
. ..++++.- .++|+||.|+|.....+..+ .+++.|. +|++..+
T Consensus 86 ~~i~v~~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~---~~l~~GakkvVId~pa 139 (354)
T 3cps_A 86 KVVKVFQAKDPAEIPWGASGAQIVCESTGVFTTEEKAS---LHLKGGAKKVIISAPP 139 (354)
T ss_dssp EEEEEECCSCGGGCCHHHHTCCEEEECSSSCCSHHHHG---GGGTTTCSEEEESSCC
T ss_pred eEEEEEecCChHHCCcccCCCCEEEECCCchhhHHHHH---HHHHcCCcEEEEeCCC
Confidence 0 11333321 47999999999877766554 4566677 6665543
No 435
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=92.03 E-value=0.37 Score=48.72 Aligned_cols=88 Identities=15% Similarity=0.172 Sum_probs=55.1
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCC-ceEE-EE-ec-CCchhHHHH-------------HHcCceecCCCcCCHH
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVK-VG-LR-KGSRSFAEA-------------RAAGFTEENGTLGDIY 173 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G-~~Vi-vg-~r-~~~~s~~~A-------------~~~G~~~~d~~~~~~~ 173 (417)
.|||||| .|..|.-+.+-|.+. . .++. +. .+ ...+..... .+.-+.. .+.+
T Consensus 20 ~kVaIvGAtG~vG~ell~lL~~h------p~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~-----~~~~ 88 (381)
T 3hsk_A 20 KKAGVLGATGSVGQRFILLLSKH------PEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQE-----CKPE 88 (381)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC------SSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEE-----SSSC
T ss_pred cEEEEECCCChHHHHHHHHHHcC------CCceEEEeeccccccCCCHHHhcccccccccccccccceEEe-----Cchh
Confidence 6899999 699999999877654 3 3543 22 22 222333221 1111111 1222
Q ss_pred hhhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 174 ETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 174 Eav~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
+.+.++|+||+|+|.....++.+++. +.|..|+|.++
T Consensus 89 ~~~~~~Dvvf~alp~~~s~~~~~~~~---~~G~~VIDlSa 125 (381)
T 3hsk_A 89 GNFLECDVVFSGLDADVAGDIEKSFV---EAGLAVVSNAK 125 (381)
T ss_dssp TTGGGCSEEEECCCHHHHHHHHHHHH---HTTCEEEECCS
T ss_pred hhcccCCEEEECCChhHHHHHHHHHH---hCCCEEEEcCC
Confidence 14678999999999998888887664 46887887765
No 436
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=91.95 E-value=0.36 Score=49.52 Aligned_cols=71 Identities=14% Similarity=0.128 Sum_probs=50.3
Q ss_pred ccCCCCEEEEEc-----cc---chHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHHH----HHHcCceecCCCcC
Q 014863 107 AFNGINQIGVIG-----WG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGFTEENGTLG 170 (417)
Q Consensus 107 ~l~g~kkIgIIG-----~G---~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~~----A~~~G~~~~d~~~~ 170 (417)
.|+| .||+||| +| ++..|++..+... |.+|.+....+ +...+. +.+.|.... ...
T Consensus 185 ~l~G-lkva~vgd~~~s~Gd~nnVa~Sli~~l~~l------G~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~--~~~ 255 (418)
T 2yfk_A 185 NLKG-KKVAMTWAYSPSYGKPLSVPQGIVGLMTRL------GMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFT--KTN 255 (418)
T ss_dssp GGTT-CEEEEECCCCSSSCCCSHHHHHHHHHHGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEE--EES
T ss_pred ccCC-CEEEEEeccccccCccchHHHHHHHHHHHc------CCEEEEECCccccCCHHHHHHHHHHHHHcCCEEE--EEc
Confidence 3889 9999997 24 4999999999887 99887766542 222232 344664210 156
Q ss_pred CHHhhhccCCeEEEee
Q 014863 171 DIYETISGSDLVLLLI 186 (417)
Q Consensus 171 ~~~Eav~~ADiViLav 186 (417)
+++|++++||+|+.-+
T Consensus 256 d~~eav~~ADVVytd~ 271 (418)
T 2yfk_A 256 SMAEAFKDADVVYPKS 271 (418)
T ss_dssp CHHHHHTTCSEEEECC
T ss_pred CHHHHhcCCCEEEEcc
Confidence 8999999999999865
No 437
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.93 E-value=0.24 Score=46.08 Aligned_cols=66 Identities=15% Similarity=0.174 Sum_probs=45.3
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC---HHhhhcc-CCeEEEeec
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISG-SDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~Eav~~-ADiViLavp 187 (417)
|||.|+|.|.+|..+++.|.+. |++|++..|..++. ..++......+.+ ..+++++ +|+||.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ------GHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 7999999999999999999999 99988877764431 1222211111222 3345666 999998875
Q ss_pred c
Q 014863 188 D 188 (417)
Q Consensus 188 d 188 (417)
+
T Consensus 73 ~ 73 (286)
T 3gpi_A 73 A 73 (286)
T ss_dssp H
T ss_pred C
Confidence 4
No 438
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=91.88 E-value=0.15 Score=52.11 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=31.2
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHh-hhhhhcCCceEEEEecC
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRK 149 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~-s~~~~~~G~~Vivg~r~ 149 (417)
|+| ++|+|+|+|++|..+|+.|+. . |.+|+...++
T Consensus 210 l~g-ktvgI~G~G~VG~~vA~~l~~~~------G~kVv~~sD~ 245 (419)
T 1gtm_A 210 LKG-KTIAIQGYGNAGYYLAKIMSEDF------GMKVVAVSDS 245 (419)
T ss_dssp STT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEEECS
T ss_pred cCC-CEEEEEcCCHHHHHHHHHHHHhc------CCEEEEEeCC
Confidence 899 999999999999999999998 7 9988766554
No 439
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=91.83 E-value=0.3 Score=48.07 Aligned_cols=65 Identities=22% Similarity=0.207 Sum_probs=47.6
Q ss_pred ccCCCCEEEEEccc---chHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 014863 107 AFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (417)
Q Consensus 107 ~l~g~kkIgIIG~G---~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiVi 183 (417)
.|+| .||++||=| ++..|++..+... |.++.+.....-.. +. .+.|. ..+++|++++||+|+
T Consensus 144 ~l~g-lkva~vGD~~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~-~~-~~~g~------~~d~~eav~~aDvvy 208 (304)
T 3r7f_A 144 TFKG-LTVSIHGDIKHSRVARSNAEVLTRL------GARVLFSGPSEWQD-EE-NTFGT------YVSMDEAVESSDVVM 208 (304)
T ss_dssp CCTT-CEEEEESCCTTCHHHHHHHHHHHHT------TCEEEEESCGGGSC-TT-CSSCE------ECCHHHHHHHCSEEE
T ss_pred CCCC-CEEEEEcCCCCcchHHHHHHHHHHc------CCEEEEECCCccCc-ch-hhcCc------cCCHHHHhCCCCEEE
Confidence 5789 999999975 6999999999888 99887765432111 11 12342 458999999999998
Q ss_pred Eee
Q 014863 184 LLI 186 (417)
Q Consensus 184 Lav 186 (417)
...
T Consensus 209 t~~ 211 (304)
T 3r7f_A 209 LLR 211 (304)
T ss_dssp ECC
T ss_pred ecc
Confidence 854
No 440
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.83 E-value=0.32 Score=47.42 Aligned_cols=92 Identities=18% Similarity=0.224 Sum_probs=61.5
Q ss_pred CCCCEEEEE-cccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhhc-----cCCe
Q 014863 109 NGINQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (417)
Q Consensus 109 ~g~kkIgII-G~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav~-----~ADi 181 (417)
.| ++|.|+ |.|.+|.+.++.++.. |.+|++..++ .+..+.+++.|.... +....+..+.+. ..|+
T Consensus 167 ~g-~~VlV~Gg~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 167 EG-ESVLIHGGTSGIGTTAIQLARAF------GAEVYATAGS-TGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEE
T ss_pred CC-CEEEEEcCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceE
Confidence 56 899999 6899999999999988 9987766654 445677777776421 111123333332 5899
Q ss_pred EEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 182 ViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|+-++.... +......++++-.++..+
T Consensus 239 vid~~g~~~----~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 239 ILDMIGAAY----FERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEESCCGGG----HHHHHHTEEEEEEEEECC
T ss_pred EEECCCHHH----HHHHHHHhccCCEEEEEE
Confidence 999998653 444455666666655443
No 441
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=91.82 E-value=0.98 Score=42.77 Aligned_cols=91 Identities=16% Similarity=0.232 Sum_probs=57.0
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc----C----ceecCCCcCCHHhhhccC
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----G----FTEENGTLGDIYETISGS 179 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~----G----~~~~d~~~~~~~Eav~~A 179 (417)
-.| ++|.-||||. |.- +..|.+.. |.+| ++.+.+....+.|++. | +... ..+..+.-...
T Consensus 89 ~~~-~~vLDiGcG~-G~~-~~~la~~~-----~~~v-~gvD~s~~~~~~a~~~~~~~~~~~~v~~~---~~d~~~~~~~f 156 (318)
T 2fk8_A 89 KPG-MTLLDIGCGW-GTT-MRRAVERF-----DVNV-IGLTLSKNQHARCEQVLASIDTNRSRQVL---LQGWEDFAEPV 156 (318)
T ss_dssp CTT-CEEEEESCTT-SHH-HHHHHHHH-----CCEE-EEEESCHHHHHHHHHHHHTSCCSSCEEEE---ESCGGGCCCCC
T ss_pred CCc-CEEEEEcccc-hHH-HHHHHHHC-----CCEE-EEEECCHHHHHHHHHHHHhcCCCCceEEE---ECChHHCCCCc
Confidence 356 8999999998 333 33333321 5555 5666655555555542 3 2211 23444433568
Q ss_pred CeEEEe-----ecchhHHHHHHHHHhcCCCCcEEEE
Q 014863 180 DLVLLL-----ISDAAQADNYEKIFSCMKPNSILGL 210 (417)
Q Consensus 180 DiViLa-----vpd~a~~~Vl~eI~p~Lk~GaiL~~ 210 (417)
|+|+.. +++.....+++++...|+||-.+++
T Consensus 157 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 157 DRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp SEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred CEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 999987 6666677899999999999887653
No 442
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.80 E-value=0.59 Score=47.85 Aligned_cols=96 Identities=18% Similarity=0.138 Sum_probs=65.8
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc-------------Cce
Q 014863 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------GFT 163 (417)
Q Consensus 107 ~l~g~kkIgIIG~G----------~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~-------------G~~ 163 (417)
.++| +||+|+|+- +-...++..|.+. |.+|.+++..-.. .+..... ++.
T Consensus 326 ~~~~-~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~------g~~v~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 397 (467)
T 2q3e_A 326 TVTD-KKIAILGFAFKKDTGDTRESSSIYISKYLMDE------GAHLHIYDPKVPR-EQIVVDLSHPGVSEDDQVSRLVT 397 (467)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSSCH-HHHHHHHCC------CHHHHHEE
T ss_pred ccCC-CEEEEEeeccCCCCcchhhChHHHHHHHHHHC------CCEEEEEcCccCH-HHHhhhhccccccccccccCcee
Confidence 4788 999999986 3677888888888 9988776543221 1111111 233
Q ss_pred ecCCCcCCHHhhhccCCeEEEeecchhHHHH-HHHHHhcCCCCcEEEEeccc
Q 014863 164 EENGTLGDIYETISGSDLVLLLISDAAQADN-YEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 164 ~~d~~~~~~~Eav~~ADiViLavpd~a~~~V-l~eI~p~Lk~GaiL~~a~G~ 214 (417)
. ..+..|++++||.|+++|.-.....+ ++.+...|+...+|+|.-++
T Consensus 398 ~----~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~ 445 (467)
T 2q3e_A 398 I----SKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRV 445 (467)
T ss_dssp E----CSSHHHHHTTCSEEEECSCCGGGGGSCHHHHHHHSCSSCEEEESSCT
T ss_pred e----cCCHHHHHhCCcEEEEecCChhhhcCCHHHHHHhcCCCCEEEeCCCc
Confidence 2 34788899999999999998777543 45677778765557777654
No 443
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=91.69 E-value=0.22 Score=46.87 Aligned_cols=66 Identities=17% Similarity=0.198 Sum_probs=45.1
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCc--CCHHhhhccCCeEEEeec
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL--GDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~--~~~~Eav~~ADiViLavp 187 (417)
|+|.|.| .|.+|.++++.|.+. |++|++..|. ....+ .. ++......+ .+..++++++|+||.+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~-~~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND------GNTPIILTRS-IGNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESC-CC--------CCEEEECCCCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhC------CCEEEEEeCC-CCccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEccc
Confidence 7999999 699999999999999 9998887776 32222 11 433211111 124567889999998864
No 444
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=91.59 E-value=1 Score=39.65 Aligned_cols=93 Identities=14% Similarity=0.057 Sum_probs=58.1
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH----cCc---eecCCCcCCHHh---hhc
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGF---TEENGTLGDIYE---TIS 177 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~----~G~---~~~d~~~~~~~E---av~ 177 (417)
-.| .+|.-||+|. | .++..|.+. +.+.+| ++.+.+....+.|++ .|+ ... ..+..+ ...
T Consensus 39 ~~~-~~vLDiG~G~-G-~~~~~la~~----~~~~~v-~~vD~s~~~~~~a~~~~~~~~~~~v~~~---~~d~~~~~~~~~ 107 (204)
T 3e05_A 39 QDD-LVMWDIGAGS-A-SVSIEASNL----MPNGRI-FALERNPQYLGFIRDNLKKFVARNVTLV---EAFAPEGLDDLP 107 (204)
T ss_dssp CTT-CEEEEETCTT-C-HHHHHHHHH----CTTSEE-EEEECCHHHHHHHHHHHHHHTCTTEEEE---ECCTTTTCTTSC
T ss_pred CCC-CEEEEECCCC-C-HHHHHHHHH----CCCCEE-EEEeCCHHHHHHHHHHHHHhCCCcEEEE---eCChhhhhhcCC
Confidence 356 8999999997 3 344455554 002455 566665555555544 232 211 122222 225
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 178 ~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
..|+|++..+.....++++++...|+||-.+++.
T Consensus 108 ~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 108 DPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp CCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEE
Confidence 6899999887777778999999999998876644
No 445
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.58 E-value=0.19 Score=49.01 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=28.9
Q ss_pred CCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEec
Q 014863 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 148 (417)
Q Consensus 111 ~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r 148 (417)
||||+|||.|..|..+++.+++. |+++++.+.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~------G~~vv~vd~ 32 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKA------GMKVVLVDK 32 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeC
Confidence 79999999999999999999999 998877654
No 446
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=91.57 E-value=0.4 Score=47.84 Aligned_cols=70 Identities=10% Similarity=0.034 Sum_probs=48.9
Q ss_pred ccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHHH----HHHcCceecCCCcCCHHhhhc
Q 014863 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGFTEENGTLGDIYETIS 177 (417)
Q Consensus 107 ~l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~~----A~~~G~~~~d~~~~~~~Eav~ 177 (417)
.|+| .||++|| .+++..|++..+... |.++.+...++ ....+. +.+.|.... ...+++ +++
T Consensus 172 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~--~~~d~~-av~ 241 (339)
T 4a8t_A 172 KLED-CKVVFVGDATQVCFSLGLITTKM------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL--VTDDAS-SVE 241 (339)
T ss_dssp CGGG-CEEEEESSCCHHHHHHHHHHHHT------TCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEE--EECCGG-GGT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE--EECChh-HHc
Confidence 5889 9999999 468899999999887 99887765432 222222 344564321 146788 999
Q ss_pred cCCeEEEee
Q 014863 178 GSDLVLLLI 186 (417)
Q Consensus 178 ~ADiViLav 186 (417)
+||+|+.-+
T Consensus 242 ~aDvvytd~ 250 (339)
T 4a8t_A 242 GADFLYTDV 250 (339)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEecC
Confidence 999999643
No 447
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=91.47 E-value=0.21 Score=47.67 Aligned_cols=77 Identities=14% Similarity=0.067 Sum_probs=50.7
Q ss_pred cccccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH-cCceecCCCcCC---HHhhhc-
Q 014863 104 LPDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGD---IYETIS- 177 (417)
Q Consensus 104 ~~~~l~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~-~G~~~~d~~~~~---~~Eav~- 177 (417)
.++.++| |+|.|.|. |-+|.++++.|.+. |++|++..|......+.... .++......+.+ ..++++
T Consensus 14 ~~~~~~~-~~vlVTGasG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~ 86 (330)
T 2pzm_A 14 LVPRGSH-MRILITGGAGCLGSNLIEHWLPQ------GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDS 86 (330)
T ss_dssp CCSTTTC-CEEEEETTTSHHHHHHHHHHGGG------TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHH
T ss_pred CcccCCC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhh
Confidence 3678899 99999996 99999999999998 99988877743321110000 122110111333 345677
Q ss_pred -cCCeEEEeec
Q 014863 178 -GSDLVLLLIS 187 (417)
Q Consensus 178 -~ADiViLavp 187 (417)
+.|+||.+..
T Consensus 87 ~~~D~vih~A~ 97 (330)
T 2pzm_A 87 FKPTHVVHSAA 97 (330)
T ss_dssp HCCSEEEECCC
T ss_pred cCCCEEEECCc
Confidence 8999998874
No 448
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=91.45 E-value=0.25 Score=47.91 Aligned_cols=68 Identities=12% Similarity=0.073 Sum_probs=42.8
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCc-------eEEEEecCCc--hhHHHHH--Hc---CceecCC-CcCCHHhh
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKVGLRKGS--RSFAEAR--AA---GFTEENG-TLGDIYET 175 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~-------~Vivg~r~~~--~s~~~A~--~~---G~~~~d~-~~~~~~Ea 175 (417)
+||.|+|. |.+|.+++..|... |+ +|++.++... +....+. .. .+.. |- ...+..++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~------g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~-di~~~~~~~~a 77 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG------EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLA-GLEATDDPKVA 77 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEE-EEEEESCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccC-CeEeccChHHH
Confidence 68999996 99999999999887 75 6666554321 1111111 11 1110 00 02456788
Q ss_pred hccCCeEEEee
Q 014863 176 ISGSDLVLLLI 186 (417)
Q Consensus 176 v~~ADiViLav 186 (417)
++++|+||.+.
T Consensus 78 ~~~~D~Vih~A 88 (327)
T 1y7t_A 78 FKDADYALLVG 88 (327)
T ss_dssp TTTCSEEEECC
T ss_pred hCCCCEEEECC
Confidence 99999999874
No 449
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=91.44 E-value=0.5 Score=46.55 Aligned_cols=72 Identities=11% Similarity=0.072 Sum_probs=51.8
Q ss_pred ccCCCCEEEEEcc---cchHHHHHHHHHhhhhhhcCCceEEEEecC----CchhHHHHHHcCceecCCCcCCHHhhhccC
Q 014863 107 AFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAAGFTEENGTLGDIYETISGS 179 (417)
Q Consensus 107 ~l~g~kkIgIIG~---G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~----~~~s~~~A~~~G~~~~d~~~~~~~Eav~~A 179 (417)
.|+| .||++||= +++..|++..+... .|.+|.+...+ +....+.+++.|.... ...+++|++++|
T Consensus 151 ~l~g-l~va~vGD~~~~rva~Sl~~~~~~~-----~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~a 222 (310)
T 3csu_A 151 RLDN-LHVAMVGDLKYGRTVHSLTQALAKF-----DGNRFYFIAPDALAMPQYILDMLDEKGIAWS--LHSSIEEVMAEV 222 (310)
T ss_dssp CSSS-CEEEEESCTTTCHHHHHHHHHHHTS-----SSCEEEEECCGGGCCCHHHHHHHHHTTCCEE--ECSCGGGTTTTC
T ss_pred CcCC-cEEEEECCCCCCchHHHHHHHHHhC-----CCCEEEEECCcccccCHHHHHHHHHcCCeEE--EEcCHHHHhcCC
Confidence 5789 99999997 58999999888653 17787776543 2233456667775321 146899999999
Q ss_pred CeEEEee
Q 014863 180 DLVLLLI 186 (417)
Q Consensus 180 DiViLav 186 (417)
|+|+...
T Consensus 223 Dvvyt~~ 229 (310)
T 3csu_A 223 DILYMTR 229 (310)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9999865
No 450
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.39 E-value=0.35 Score=46.10 Aligned_cols=68 Identities=29% Similarity=0.235 Sum_probs=44.4
Q ss_pred cccCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC---HHhhhccCCe
Q 014863 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDL 181 (417)
Q Consensus 106 ~~l~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~Eav~~ADi 181 (417)
+.+++ |+|.|.|. |-+|.++++.|.+. |++|++..|.... .++......+.+ ..++++++|+
T Consensus 15 ~~~~~-~~vlVtGatG~iG~~l~~~L~~~------G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (347)
T 4id9_A 15 VPRGS-HMILVTGSAGRVGRAVVAALRTQ------GRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSA 80 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHT------TCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSE
T ss_pred cccCC-CEEEEECCCChHHHHHHHHHHhC------CCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCE
Confidence 56777 99999996 99999999999999 9998877776433 222211111223 4567889999
Q ss_pred EEEeec
Q 014863 182 VLLLIS 187 (417)
Q Consensus 182 ViLavp 187 (417)
||.+..
T Consensus 81 vih~A~ 86 (347)
T 4id9_A 81 VLHLGA 86 (347)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 998754
No 451
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.39 E-value=0.44 Score=49.50 Aligned_cols=91 Identities=12% Similarity=0.217 Sum_probs=65.0
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhh
Q 014863 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI 176 (417)
Q Consensus 107 ~l~g~kkIgIIG~G----------~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav 176 (417)
.++| +||+|.|+- +-...++..|.+. |.+|.+++..-.. . .++.. ..+.++++
T Consensus 350 ~~~~-~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~------g~~V~~~DP~~~~-~-----~~~~~----~~~~~~~~ 412 (478)
T 3g79_A 350 KMDG-SKVAMLGWAFIKDSDDARNTPSEPYRDLCLKA------GASVMVHDPYVVN-Y-----PGVEI----SDNLEEVV 412 (478)
T ss_dssp CSTT-CEEEEECSSSSTTCSCCTTCTHHHHHHHHHHH------TCEEEEECSSCCC-B-----TTBCE----ESCHHHHH
T ss_pred CCCC-CEEEEEeeecCCCCcchhcCcHHHHHHHHHHC------CCEEEEECCCccc-c-----cCcce----ecCHHHHH
Confidence 5788 999999973 3467888888888 9988776543221 1 11221 35788999
Q ss_pred ccCCeEEEeecchhHHH-HHHHHHhcCC-CCcEEEEeccc
Q 014863 177 SGSDLVLLLISDAAQAD-NYEKIFSCMK-PNSILGLSHGF 214 (417)
Q Consensus 177 ~~ADiViLavpd~a~~~-Vl~eI~p~Lk-~GaiL~~a~G~ 214 (417)
++||+|+++|.-....+ -++.+...|+ ++.+|+|.-++
T Consensus 413 ~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~~~i~D~rn~ 452 (478)
T 3g79_A 413 RNADAIVVLAGHSAYSSLKADWAKKVSAKANPVIIDGRNV 452 (478)
T ss_dssp TTCSEEEECSCCHHHHSCCHHHHHHHHCCSSCEEEESSSC
T ss_pred hcCCEEEEecCCHHHHhhhHHHHHHHhccCCCEEEECCCC
Confidence 99999999999777654 2456777777 36788887765
No 452
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.38 E-value=0.44 Score=46.48 Aligned_cols=94 Identities=14% Similarity=0.083 Sum_probs=59.8
Q ss_pred cCCCCEEEEEcccchHHHH-HHHH-HhhhhhhcCCce-EEEEecCCc--hhHHHHHHcCceecCCCcCCHHhhhc----c
Q 014863 108 FNGINQIGVIGWGSQGPAQ-AQNL-RDSLAEAKSDIV-VKVGLRKGS--RSFAEARAAGFTEENGTLGDIYETIS----G 178 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~Ai-A~~L-r~s~~~~~~G~~-Vivg~r~~~--~s~~~A~~~G~~~~d~~~~~~~Eav~----~ 178 (417)
+++ .+|.|+|.|.+|... ++-+ +.. |.+ |++..+..+ ...+.+++.|....+....+..+ +. .
T Consensus 171 ~~~-~~VlV~GaG~vG~~a~iqla~k~~------Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~gg 242 (357)
T 2b5w_A 171 WDP-SSAFVLGNGSLGLLTLAMLKVDDK------GYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED-VPDVYEQ 242 (357)
T ss_dssp CCC-CEEEEECCSHHHHHHHHHHHHCTT------CCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSCC
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHHHc------CCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHH-HHHhCCC
Confidence 456 899999999999999 8887 777 886 766555433 04678888897531111112223 32 4
Q ss_pred CCeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 179 ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
.|+||-++.... .++.....++++-.++..+
T Consensus 243 ~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 243 MDFIYEATGFPK---HAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EEEEEECSCCHH---HHHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCCChH---HHHHHHHHHhcCCEEEEEe
Confidence 799999987542 3444445566665555443
No 453
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=91.37 E-value=0.15 Score=50.47 Aligned_cols=90 Identities=17% Similarity=0.116 Sum_probs=52.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCc--hhHHHHHHcCceecCCCcCCH-HhhhccCCeEEEeec
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDI-YETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~--~s~~~A~~~G~~~~d~~~~~~-~Eav~~ADiViLavp 187 (417)
+||+|+| .|.+|..+.+.|.++ .-..++++...+... +... -.|... .+.+. .+...++|+||+|+|
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~---~~~~~elv~i~s~~~~g~~~~---~~g~~i---~~~~~~~~~~~~~DvV~~a~g 77 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDER---DFPLHRLHLLASAESAGQRMG---FAESSL---RVGDVDSFDFSSVGLAFFAAA 77 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT---TCCCSCEEEEECTTTTTCEEE---ETTEEE---ECEEGGGCCGGGCSEEEECSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhC---CCCcEEEEEEecCCCCCCccc---cCCcce---EEecCCHHHhcCCCEEEEcCC
Confidence 6899999 899999999998755 000224443332211 1100 012111 01111 233578999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 188 DAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 188 d~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
.....+..+.+. +.|..+++.++
T Consensus 78 ~~~s~~~a~~~~---~aG~kvId~Sa 100 (340)
T 2hjs_A 78 AEVSRAHAERAR---AAGCSVIDLSG 100 (340)
T ss_dssp HHHHHHHHHHHH---HTTCEEEETTC
T ss_pred cHHHHHHHHHHH---HCCCEEEEeCC
Confidence 887777776543 45776666554
No 454
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=91.34 E-value=0.48 Score=44.17 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=32.5
Q ss_pred ccCCCCEEEEEccc---chHHHHHHHHHhhhhhhcCCceEEEEecCCc
Q 014863 107 AFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS 151 (417)
Q Consensus 107 ~l~g~kkIgIIG~G---~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~ 151 (417)
.|+| |++-|-|.+ -||.++|+.|.+. |.+|++..|+..
T Consensus 3 ~l~g-K~alVTGaa~~~GIG~aiA~~la~~------Ga~Vvi~~r~~~ 43 (256)
T 4fs3_A 3 NLEN-KTYVIMGIANKRSIAFGVAKVLDQL------GAKLVFTYRKER 43 (256)
T ss_dssp CCTT-CEEEEECCCSTTCHHHHHHHHHHHT------TCEEEEEESSGG
T ss_pred CCCC-CEEEEECCCCCchHHHHHHHHHHHC------CCEEEEEECCHH
Confidence 4789 999999975 3999999999999 999988887643
No 455
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.27 E-value=0.25 Score=47.26 Aligned_cols=88 Identities=15% Similarity=0.143 Sum_probs=58.0
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeecc
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavpd 188 (417)
.| .+|.|+|.|.+|...++-++.. |.+|++.. +.+..+.+++.|.... +.+.+++-...|+|+-++..
T Consensus 142 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~Vi~~~--~~~~~~~~~~lGa~~v---~~d~~~v~~g~Dvv~d~~g~ 209 (315)
T 3goh_A 142 KQ-REVLIVGFGAVNNLLTQMLNNA------GYVVDLVS--ASLSQALAAKRGVRHL---YREPSQVTQKYFAIFDAVNS 209 (315)
T ss_dssp SC-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEC--SSCCHHHHHHHTEEEE---ESSGGGCCSCEEEEECC---
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEE--ChhhHHHHHHcCCCEE---EcCHHHhCCCccEEEECCCc
Confidence 57 8999999999999999999988 98876655 3456788888897531 22322222468999988875
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEec
Q 014863 189 AAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 189 ~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
... ......++++-.++...
T Consensus 210 ~~~----~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 210 QNA----AALVPSLKANGHIICIQ 229 (315)
T ss_dssp --------TTGGGEEEEEEEEEEC
T ss_pred hhH----HHHHHHhcCCCEEEEEe
Confidence 433 34456677766655443
No 456
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=91.24 E-value=0.49 Score=48.19 Aligned_cols=72 Identities=15% Similarity=0.143 Sum_probs=50.4
Q ss_pred cccCCCCEEEEEcc-----c---chHHHHHHHHHhhhhhhcCCceEEEEecC----CchhHH----HHHHcCceecCCCc
Q 014863 106 DAFNGINQIGVIGW-----G---SQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFA----EARAAGFTEENGTL 169 (417)
Q Consensus 106 ~~l~g~kkIgIIG~-----G---~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~----~~~s~~----~A~~~G~~~~d~~~ 169 (417)
+.|+| +||+|||. | ++..|++..+... |++|.+.... .+...+ .+.+.|.... .+
T Consensus 187 ~~l~G-lkva~vgd~~~~~G~~nnVa~Sli~~~~~l------G~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~--~~ 257 (399)
T 3q98_A 187 ENLKG-KKIAMTWAYSPSYGKPLSVPQGIIGLMTRF------GMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFR--QV 257 (399)
T ss_dssp GGGTT-CEEEEECCCCSSCCCCTHHHHHHHHHHGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EE
T ss_pred cccCC-CEEEEEEecccccCcchHHHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE--EE
Confidence 35788 99999984 4 7889999888877 9988776543 222222 2345564321 15
Q ss_pred CCHHhhhccCCeEEEee
Q 014863 170 GDIYETISGSDLVLLLI 186 (417)
Q Consensus 170 ~~~~Eav~~ADiViLav 186 (417)
.+++|++++||+|+.-+
T Consensus 258 ~d~~eav~~aDvVytd~ 274 (399)
T 3q98_A 258 TSMEEAFKDADIVYPKS 274 (399)
T ss_dssp SCHHHHHTTCSEEEECC
T ss_pred cCHHHHhCCCCEEEecC
Confidence 78999999999998765
No 457
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=91.20 E-value=1.4 Score=43.16 Aligned_cols=93 Identities=16% Similarity=0.106 Sum_probs=61.2
Q ss_pred cCCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhhc-----cCC
Q 014863 108 FNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSD 180 (417)
Q Consensus 108 l~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav~-----~AD 180 (417)
-.| .+|.|+|. |.+|...++-++.. |.+|++.. +.+..+.+++.|.... +....+..+.+. ..|
T Consensus 163 ~~g-~~VlV~Ga~G~vG~~a~qla~~~------Ga~Vi~~~--~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKP-VYVLVYGGSTATATVTMQMLRLS------GYIPIATC--SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSC-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEE--CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCC-cEEEEECCCcHHHHHHHHHHHHC------CCEEEEEe--CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCcc
Confidence 467 99999999 89999999999888 98876553 3456788999987421 111123333332 389
Q ss_pred eEEEeecchhHHHHHHHHHhcC-CCCcEEEEec
Q 014863 181 LVLLLISDAAQADNYEKIFSCM-KPNSILGLSH 212 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~L-k~GaiL~~a~ 212 (417)
+|+-++.... .++.....+ +++-.++..+
T Consensus 234 ~v~d~~g~~~---~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 234 YALDCITNVE---STTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEEESSCSHH---HHHHHHHHSCTTCEEEEESS
T ss_pred EEEECCCchH---HHHHHHHHhhcCCCEEEEEe
Confidence 9999998643 233334455 4655555554
No 458
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=91.13 E-value=0.46 Score=47.73 Aligned_cols=70 Identities=10% Similarity=0.034 Sum_probs=48.9
Q ss_pred ccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCC----chhHHH----HHHcCceecCCCcCCHHhhhc
Q 014863 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGFTEENGTLGDIYETIS 177 (417)
Q Consensus 107 ~l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~----~~s~~~----A~~~G~~~~d~~~~~~~Eav~ 177 (417)
.|+| .||+||| .+++..|++..+... |.++.+..... ....+. +.+.|.... ...+++ +++
T Consensus 150 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~-av~ 219 (355)
T 4a8p_A 150 KLED-CKVVFVGDATQVCFSLGLITTKM------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL--VTDDAS-SVE 219 (355)
T ss_dssp CGGG-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEE--EECCGG-GGT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEE--EECCHH-HHc
Confidence 5789 9999999 568999999999887 99887765432 222222 344564321 146788 999
Q ss_pred cCCeEEEee
Q 014863 178 GSDLVLLLI 186 (417)
Q Consensus 178 ~ADiViLav 186 (417)
++|+|+.-+
T Consensus 220 ~aDVVytd~ 228 (355)
T 4a8p_A 220 GADFLYTDV 228 (355)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEecc
Confidence 999999633
No 459
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=91.07 E-value=0.23 Score=44.76 Aligned_cols=73 Identities=15% Similarity=0.197 Sum_probs=48.2
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCc--eEEEEecCCchhHHHHHHcCceecCCCc---CCHHhhhccCCe
Q 014863 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTL---GDIYETISGSDL 181 (417)
Q Consensus 108 l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~--~Vivg~r~~~~s~~~A~~~G~~~~d~~~---~~~~Eav~~ADi 181 (417)
+++ |+|.|.| .|-+|.++++.|.+. |+ +|++..|...+..+.. ..++......+ .+.++++++.|+
T Consensus 16 m~~-~~vlVtGasg~iG~~l~~~L~~~------G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 16 MQN-KSVFILGASGETGRVLLKEILEQ------GLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp HTC-CEEEEECTTSHHHHHHHHHHHHH------TCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred hcC-CeEEEECCCcHHHHHHHHHHHcC------CCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHHHHHHHhcCCCE
Confidence 567 8999999 699999999999999 98 8888777643221111 11221100011 234567788999
Q ss_pred EEEeecc
Q 014863 182 VLLLISD 188 (417)
Q Consensus 182 ViLavpd 188 (417)
||.+...
T Consensus 88 vi~~ag~ 94 (242)
T 2bka_A 88 GFCCLGT 94 (242)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9998754
No 460
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=91.07 E-value=0.91 Score=47.14 Aligned_cols=72 Identities=11% Similarity=0.111 Sum_probs=49.9
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHc-CceecCCCcCCHH---h-hhccCCeEEEee
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIY---E-TISGSDLVLLLI 186 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~-G~~~~d~~~~~~~---E-av~~ADiViLav 186 (417)
+.|.|+|+|..|..+++.|.+. |+++++.+. +.+..+.+.+. |+...-+...+.+ + -+++||.|++ +
T Consensus 128 ~hviI~G~g~~g~~la~~L~~~------~~~vvvid~-~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~-t 199 (565)
T 4gx0_A 128 GHILIFGIDPITRTLIRKLESR------NHLFVVVTD-NYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA-N 199 (565)
T ss_dssp SCEEEESCCHHHHHHHHHTTTT------TCCEEEEES-CHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE-C
T ss_pred CeEEEECCChHHHHHHHHHHHC------CCCEEEEEC-CHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE-e
Confidence 5799999999999999999988 888776554 45556667666 7643212222322 1 3688999998 5
Q ss_pred cchhH
Q 014863 187 SDAAQ 191 (417)
Q Consensus 187 pd~a~ 191 (417)
+++..
T Consensus 200 ~~D~~ 204 (565)
T 4gx0_A 200 LSDPD 204 (565)
T ss_dssp SCHHH
T ss_pred CCcHH
Confidence 55444
No 461
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.06 E-value=0.39 Score=46.04 Aligned_cols=92 Identities=14% Similarity=0.112 Sum_probs=58.9
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh------ccCC
Q 014863 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (417)
Q Consensus 109 ~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav------~~AD 180 (417)
.| ++|.|+| .|.+|.+.++.++.. |.+|++..++ ....+.+++.|.... |....+..+.+ ...|
T Consensus 140 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 140 PD-EQFLFHAAAGGVGLIACQWAKAL------GAKLIGTVGT-AQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCce
Confidence 46 8999999 799999999999998 9988766654 444566666665310 11111222222 1479
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+||.++... .++...+.++++-.++..+
T Consensus 212 ~vi~~~g~~----~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 212 VVYDSVGRD----TWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEECSCGG----GHHHHHHTEEEEEEEEECC
T ss_pred EEEECCchH----HHHHHHHHhcCCCEEEEEe
Confidence 999998743 3445556666666555443
No 462
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=91.00 E-value=0.84 Score=43.09 Aligned_cols=71 Identities=17% Similarity=0.144 Sum_probs=44.7
Q ss_pred CCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCC-chhH---HHHHHcC-ceecCCCcCC---HHhhhcc--C
Q 014863 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSF---AEARAAG-FTEENGTLGD---IYETISG--S 179 (417)
Q Consensus 111 ~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~-~~s~---~~A~~~G-~~~~d~~~~~---~~Eav~~--A 179 (417)
||+|.|.| .|-+|.++++.|.+. |++|++..|.. .... +.....+ +......+.+ .++++++ .
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 74 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ------GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMP 74 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC------CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCC
Confidence 68999999 699999999999998 99988776532 1111 1111122 2211111223 3456777 9
Q ss_pred CeEEEeec
Q 014863 180 DLVLLLIS 187 (417)
Q Consensus 180 DiViLavp 187 (417)
|+||.+..
T Consensus 75 d~vih~A~ 82 (347)
T 1orr_A 75 DSCFHLAG 82 (347)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99998875
No 463
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.99 E-value=0.53 Score=45.53 Aligned_cols=93 Identities=18% Similarity=0.166 Sum_probs=59.8
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCC-ceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh------ccC
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGS 179 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav------~~A 179 (417)
-.| .+|.|+|.|.+|...++-++.. | .+|++..+ +.+..+.+++.|.... +. ..+..+.+ ...
T Consensus 170 ~~g-~~vlv~GaG~vG~~a~qla~~~------g~~~Vi~~~~-~~~~~~~~~~lGa~~~i~~-~~~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 170 GPG-STAVVIGVGGLGHVGIQILRAV------SAARVIAVDL-DDDRLALAREVGADAAVKS-GAGAADAIRELTGGQGA 240 (345)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHH------CCCEEEEEES-CHHHHHHHHHTTCSEEEEC-STTHHHHHHHHHGGGCE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEcC-CHHHHHHHHHcCCCEEEcC-CCcHHHHHHHHhCCCCC
Confidence 356 8999999999999988888766 5 46655444 4556788889886421 10 01222222 168
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|+|+-++.... .++.....++++-.++..+
T Consensus 241 d~v~d~~G~~~---~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 241 TAVFDFVGAQS---TIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEESSCCHH---HHHHHHHHEEEEEEEEECS
T ss_pred eEEEECCCCHH---HHHHHHHHHhcCCEEEEEC
Confidence 99999998753 3444445566666665443
No 464
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=90.91 E-value=0.82 Score=44.85 Aligned_cols=91 Identities=14% Similarity=0.179 Sum_probs=60.2
Q ss_pred CCCCEEEEEc-ccchHHHHHHHHHh-hhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhhc-----cCC
Q 014863 109 NGINQIGVIG-WGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSD 180 (417)
Q Consensus 109 ~g~kkIgIIG-~G~mG~AiA~~Lr~-s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav~-----~AD 180 (417)
+| .+|.|+| .|.+|...++-++. . |.+|++..+ +.+..+.+++.|.... +. ..+..+.+. ..|
T Consensus 171 ~g-~~VlV~Ga~G~vG~~a~qlak~~~------g~~Vi~~~~-~~~~~~~~~~lGad~vi~~-~~~~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 171 AA-PAILIVGGAGGVGSIAVQIARQRT------DLTVIATAS-RPETQEWVKSLGAHHVIDH-SKPLAAEVAALGLGAPA 241 (363)
T ss_dssp SE-EEEEEESTTSHHHHHHHHHHHHHC------CSEEEEECS-SHHHHHHHHHTTCSEEECT-TSCHHHHHHTTCSCCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHhc------CCEEEEEeC-CHHHHHHHHHcCCCEEEeC-CCCHHHHHHHhcCCCce
Confidence 57 8999999 99999999988886 5 677765544 4555788888886421 11 123333332 589
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+|+-++... ..++.....++++-.++..
T Consensus 242 vvid~~g~~---~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 242 FVFSTTHTD---KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEECSCHH---HHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCCch---hhHHHHHHHhcCCCEEEEE
Confidence 999988743 2344455567777666544
No 465
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=90.81 E-value=0.31 Score=47.51 Aligned_cols=76 Identities=16% Similarity=0.095 Sum_probs=48.9
Q ss_pred cccCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCC-ceEEEEecCCchhHHHHH-HcCceecCCCcCC---HHhhhccC
Q 014863 106 DAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEAR-AAGFTEENGTLGD---IYETISGS 179 (417)
Q Consensus 106 ~~l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G-~~Vivg~r~~~~s~~~A~-~~G~~~~d~~~~~---~~Eav~~A 179 (417)
..+++ |+|.|.| .|.+|.++++.|.+. | ++|++..|......+... ..++......+.+ ..++++++
T Consensus 28 ~~~~~-~~ilVtGatG~iG~~l~~~L~~~------g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~ 100 (377)
T 2q1s_A 28 SKLAN-TNVMVVGGAGFVGSNLVKRLLEL------GVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEY 100 (377)
T ss_dssp GGGTT-CEEEEETTTSHHHHHHHHHHHHT------TCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCC
T ss_pred HHhCC-CEEEEECCccHHHHHHHHHHHHc------CCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCC
Confidence 35677 8999999 599999999999999 9 888877665332111110 1222211111233 34567789
Q ss_pred CeEEEeecc
Q 014863 180 DLVLLLISD 188 (417)
Q Consensus 180 DiViLavpd 188 (417)
|+||.+...
T Consensus 101 d~Vih~A~~ 109 (377)
T 2q1s_A 101 DYVFHLATY 109 (377)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999988653
No 466
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=90.79 E-value=1.1 Score=46.14 Aligned_cols=97 Identities=14% Similarity=0.178 Sum_probs=66.0
Q ss_pred ccCCCCEEEEEcc----------cchHHHHHHHHHhhhhhhcCCceEEEEecCCch--hHHHHHH-cC-------ceecC
Q 014863 107 AFNGINQIGVIGW----------GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR--SFAEARA-AG-------FTEEN 166 (417)
Q Consensus 107 ~l~g~kkIgIIG~----------G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~--s~~~A~~-~G-------~~~~d 166 (417)
.++| +||+|.|+ .+-...++..|.+. |.+|.+++..-.. ....... .+ +..
T Consensus 332 ~~~~-~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~------g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~-- 402 (481)
T 2o3j_A 332 TVTD-KKIAIFGFAFKKNTGDTRESSAIHVIKHLMEE------HAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITV-- 402 (481)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEE--
T ss_pred ccCC-CeEEEEeeeeCCCCCccccChHHHHHHHHHHC------CCEEEEECCCCCchhhHHHHHhhhccccccCceee--
Confidence 4688 99999997 35667788888887 9888776543221 1112221 11 222
Q ss_pred CCcCCHHhhhccCCeEEEeecchhHHHH-HHHHHhcCCCCcEEEEeccc
Q 014863 167 GTLGDIYETISGSDLVLLLISDAAQADN-YEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 167 ~~~~~~~Eav~~ADiViLavpd~a~~~V-l~eI~p~Lk~GaiL~~a~G~ 214 (417)
+.+..|+++++|.|+++|.-.....+ ++.+...|+...+|+|.-++
T Consensus 403 --~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~ 449 (481)
T 2o3j_A 403 --ESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLI 449 (481)
T ss_dssp --ESSHHHHHTTCSEEEECSCCGGGTTSCHHHHHHHSCSSCEEEESSSC
T ss_pred --cCCHHHHHcCCCEEEEcCCcHHhhccCHHHHHHhcCCCCEEEECCCC
Confidence 35778899999999999998776543 55677778776678887664
No 467
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=90.65 E-value=0.51 Score=45.47 Aligned_cols=92 Identities=14% Similarity=0.168 Sum_probs=60.8
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHH-HcCceec-CCC-cCCHHhhhc-----cC
Q 014863 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEE-NGT-LGDIYETIS-----GS 179 (417)
Q Consensus 109 ~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~-~~G~~~~-d~~-~~~~~Eav~-----~A 179 (417)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++ ....+.+. +.|.... |.. ..+..+.+. ..
T Consensus 155 ~g-~~vlI~Ga~g~iG~~~~~~a~~~------G~~V~~~~~~-~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 155 EG-ETVYVSAASGAVGQLVGQLAKMM------GCYVVGSAGS-KEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCC
Confidence 56 89999997 99999999999988 9887766654 44456666 5675310 111 012333332 58
Q ss_pred CeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 180 DiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
|+|+-++... .++.....++++-.++..+
T Consensus 227 d~vi~~~g~~----~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 227 DIYFENVGGK----MLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEEESSCHH----HHHHHHTTEEEEEEEEECC
T ss_pred cEEEECCCHH----HHHHHHHHHhcCCEEEEEc
Confidence 9999998742 4556667777776666543
No 468
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=90.59 E-value=0.15 Score=51.22 Aligned_cols=87 Identities=15% Similarity=0.204 Sum_probs=53.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc---eEEEEecC--CchhHHHHHHcCceecCCCcCC-HHhhhccCCeEEE
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRK--GSRSFAEARAAGFTEENGTLGD-IYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~---~Vivg~r~--~~~s~~~A~~~G~~~~d~~~~~-~~Eav~~ADiViL 184 (417)
+||+||| .|..|.-+.+-|.+. ++ ++...... ..+... -.|... .+.+ ..+.+.++|+||+
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~------~~p~~el~~~as~~saG~~~~---~~~~~~---~~~~~~~~~~~~~Dvvf~ 70 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEES------TLPIDKIRYLASARSAGKSLK---FKDQDI---TIEETTETAFEGVDIALF 70 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC------CCCEEEEEEEECTTTTTCEEE---ETTEEE---EEEECCTTTTTTCSEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcC------CCCcEEEEEEEccccCCCcce---ecCCCc---eEeeCCHHHhcCCCEEEE
Confidence 6899999 899999999988775 44 33322211 111111 011110 0111 1234678999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
|+|.....+..+.+. +.|..|++.++
T Consensus 71 a~~~~~s~~~a~~~~---~~G~~vIDlSa 96 (366)
T 3pwk_A 71 SAGSSTSAKYAPYAV---KAGVVVVDNTS 96 (366)
T ss_dssp CSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CCChHhHHHHHHHHH---HCCCEEEEcCC
Confidence 999888887777654 46777887765
No 469
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=90.59 E-value=0.37 Score=49.93 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=40.0
Q ss_pred CEEEEEcccchHHHH--HHHHHhhhhhhcCCceEEEEecCCchhHHH--------HHHcCceecCCCcCCHHhhhccCCe
Q 014863 112 NQIGVIGWGSQGPAQ--AQNLRDSLAEAKSDIVVKVGLRKGSRSFAE--------ARAAGFTEENGTLGDIYETISGSDL 181 (417)
Q Consensus 112 kkIgIIG~G~mG~Ai--A~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~--------A~~~G~~~~d~~~~~~~Eav~~ADi 181 (417)
+||+|||.|+.|.+. ...|....+=.+.+.++++.+ .+....+. +...|....-...+|.+|++++||+
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~D-i~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~gAD~ 79 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMD-VHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEGADF 79 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEEC-SCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSE
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEEC-CCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCCCCE
Confidence 589999999988553 333433210011123555544 43322211 1223321100124688999999999
Q ss_pred EEEee
Q 014863 182 VLLLI 186 (417)
Q Consensus 182 ViLav 186 (417)
||+.+
T Consensus 80 Vi~~~ 84 (477)
T 3u95_A 80 IINTA 84 (477)
T ss_dssp EEECC
T ss_pred EEECc
Confidence 99986
No 470
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=90.56 E-value=0.14 Score=51.98 Aligned_cols=69 Identities=14% Similarity=0.211 Sum_probs=47.6
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchh-HHHHHHcCceecCCCcCCHHhhhccCCeEEEee
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s-~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLav 186 (417)
+++ |+|.|||.|-.|.+.|+-|.+. |++|.+.+.+.... ..... .|+....+. ...+.++++|+||+..
T Consensus 3 ~~~-~~v~viG~G~~G~~~a~~l~~~------G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~--~~~~~~~~~d~vV~s~ 72 (439)
T 2x5o_A 3 YQG-KNVVIIGLGLTGLSCVDFFLAR------GVTPRVMDTRMTPPGLDKLP-EAVERHTGS--LNDEWLMAADLIVASP 72 (439)
T ss_dssp CTT-CCEEEECCHHHHHHHHHHHHTT------TCCCEEEESSSSCTTGGGSC-TTSCEEESS--CCHHHHHTCSEEEECT
T ss_pred CCC-CEEEEEeecHHHHHHHHHHHhC------CCEEEEEECCCCcchhHHhh-CCCEEEECC--CcHHHhccCCEEEeCC
Confidence 577 9999999999999999999888 99988777653321 11122 466531011 1256677899999873
No 471
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.55 E-value=0.49 Score=45.51 Aligned_cols=92 Identities=20% Similarity=0.254 Sum_probs=59.0
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh------ccCC
Q 014863 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (417)
Q Consensus 109 ~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav------~~AD 180 (417)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++ ....+.+++.|.... |....+..+.+ ...|
T Consensus 145 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------G~~Vi~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 145 PG-DYVLIHAAAGGMGHIMVPWARHL------GATVIGTVST-EEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TT-CEEEETTTTSTTHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CC-CEEEEECCccHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCe
Confidence 46 89999995 99999999999988 9988776665 434566666664310 11111222222 2579
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+||.++... .++.....++++-.++..+
T Consensus 217 ~vi~~~g~~----~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 217 VVYDSIGKD----TLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEECSCTT----THHHHHHTEEEEEEEEECC
T ss_pred EEEECCcHH----HHHHHHHhhccCCEEEEEe
Confidence 999988763 3445556666666555443
No 472
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=90.37 E-value=0.65 Score=44.92 Aligned_cols=88 Identities=13% Similarity=0.153 Sum_probs=56.1
Q ss_pred cccccccccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc
Q 014863 98 RDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS 177 (417)
Q Consensus 98 ~~~f~~~~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~ 177 (417)
.+.|.......+| +||++||+- .....+++. +.++.|..++.. .|..+ ....+++++
T Consensus 129 ~d~~~~~~~~~~g-~kV~vIG~f----P~i~~~~~~------~~~l~V~E~~p~--------~g~~p----~~~~~~~lp 185 (270)
T 3l5o_A 129 NDPFIMSQNEVKG-KKVGVVGHF----PHLESLLEP------ICDLSILEWSPE--------EGDYP----LPASEFILP 185 (270)
T ss_dssp CCHHHHTTTTTTT-SEEEEESCC----TTHHHHHTT------TSEEEEEESSCC--------TTCEE----GGGHHHHGG
T ss_pred cCchhhhhcccCC-CEEEEECCc----hhHHHHHhc------CCCEEEEECCCC--------CCCCC----hhHHHHhhc
Confidence 3455555577889 999999974 345567777 778888777532 24332 234567899
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEE
Q 014863 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (417)
Q Consensus 178 ~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~ 209 (417)
+||+|++.- -.-.-..++.|..+.++...++
T Consensus 186 ~~D~viiTg-stlvN~Tl~~lL~~~~~a~~vv 216 (270)
T 3l5o_A 186 ECDYVYITC-ASVVDKTLPRLLELSRNARRIT 216 (270)
T ss_dssp GCSEEEEET-HHHHHTCHHHHHHHTTTSSEEE
T ss_pred cCCEEEEEe-ehhhcCCHHHHHhhCCCCCEEE
Confidence 999988653 2233345556666666655444
No 473
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.33 E-value=0.49 Score=46.68 Aligned_cols=92 Identities=16% Similarity=0.149 Sum_probs=57.9
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCC-ceEEEEecCCchhHHHHHHcCceec-CCC---cCCHHhhh------c
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEE-NGT---LGDIYETI------S 177 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G-~~Vivg~r~~~~s~~~A~~~G~~~~-d~~---~~~~~Eav------~ 177 (417)
.| .+|.|+|.|.+|...++-++.. | .+|++..++ .+..+.+++.|.... +.. ..+..+.+ .
T Consensus 195 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~ 266 (380)
T 1vj0_A 195 AG-KTVVIQGAGPLGLFGVVIARSL------GAENVIVIAGS-PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGR 266 (380)
T ss_dssp BT-CEEEEECCSHHHHHHHHHHHHT------TBSEEEEEESC-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred CC-CEEEEECcCHHHHHHHHHHHHc------CCceEEEEcCC-HHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCC
Confidence 57 8999999999999999999888 9 487766554 455778888886420 100 00111222 1
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 178 ~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
..|+||-++.... .++.....++++-.++..
T Consensus 267 g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 267 GADFILEATGDSR---ALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp CEEEEEECSSCTT---HHHHHHHHEEEEEEEEEC
T ss_pred CCcEEEECCCCHH---HHHHHHHHHhcCCEEEEE
Confidence 5799999987432 233344455665555543
No 474
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=90.28 E-value=1.3 Score=43.88 Aligned_cols=88 Identities=13% Similarity=0.088 Sum_probs=54.9
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCC-------------------chhH---HHHHHc-
Q 014863 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSF---AEARAA- 160 (417)
Q Consensus 105 ~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~-------------------~~s~---~~A~~~- 160 (417)
.+.|++ .+|.|||+|-.|..++++|... |+ ++.+.+... .+.. +...+.
T Consensus 31 q~~L~~-~~VlivG~GGlG~~ia~~La~~------Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln 103 (346)
T 1y8q_A 31 QKRLRA-SRVLLVGLKGLGAEIAKNLILA------GVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN 103 (346)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHHc------CCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC
Confidence 467888 9999999999999999999999 87 555553210 1111 111121
Q ss_pred -Cceec--CCCc-CCHHhhhccCCeEEEeecchhHHHHHHHHH
Q 014863 161 -GFTEE--NGTL-GDIYETISGSDLVLLLISDAAQADNYEKIF 199 (417)
Q Consensus 161 -G~~~~--d~~~-~~~~Eav~~ADiViLavpd~a~~~Vl~eI~ 199 (417)
++... ...+ ....+.+++.|+||.++-+......+.+..
T Consensus 104 p~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~ 146 (346)
T 1y8q_A 104 PMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQIC 146 (346)
T ss_dssp TTSEEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred CCeEEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHH
Confidence 22110 0001 123567899999999987666665665543
No 475
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=90.26 E-value=1.4 Score=45.28 Aligned_cols=62 Identities=19% Similarity=0.238 Sum_probs=45.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeec
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavp 187 (417)
|||.|.| .|.+|.++++.|.+. |++|++..|...+. ..+.. |- .....+++.++|+||.+..
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~------G~~V~~l~R~~~~~------~~v~~-d~-~~~~~~~l~~~D~Vih~A~ 210 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTG------GHEVIQLVRKEPKP------GKRFW-DP-LNPASDLLDGADVLVHLAG 210 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESSSCCT------TCEEC-CT-TSCCTTTTTTCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCCCCc------cceee-cc-cchhHHhcCCCCEEEECCC
Confidence 8999999 799999999999999 99988877764431 11221 11 1234567889999998764
No 476
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=90.24 E-value=1.1 Score=43.47 Aligned_cols=93 Identities=9% Similarity=-0.017 Sum_probs=57.6
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCce-EEEEecCCchhHHHHHHcCceecCCCc-----CCHHhhh-----
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENGTL-----GDIYETI----- 176 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~-Vivg~r~~~~s~~~A~~~G~~~~d~~~-----~~~~Eav----- 176 (417)
-.| .+|.|+|.|.+|...++-++.. |.+ |++..++ ++..+.+++.+-...+... .+..+.+
T Consensus 178 ~~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 178 RLG-DPVLICGAGPIGLITMLCAKAA------GACPLVITDID-EGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp CTT-CCEEEECCSHHHHHHHHHHHHT------TCCSEEEEESC-HHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTS
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCC-HHHHHHHHHhchhcccccccccchHHHHHHHHHHhC
Confidence 357 8999999999999999999888 986 6554443 4556677665211000000 1112222
Q ss_pred -ccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 177 -SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 177 -~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
...|+|+-++.... .++.....++++-.++..
T Consensus 250 g~g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 250 GIEPAVALECTGVES---SIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp SCCCSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCCCCEEEECCCChH---HHHHHHHHhcCCCEEEEE
Confidence 25899999988642 344445567777666544
No 477
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.20 E-value=0.38 Score=44.43 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=32.9
Q ss_pred cccCCCCEEEEEcc-cc-hHHHHHHHHHhhhhhhcCCceEEEEecCCc
Q 014863 106 DAFNGINQIGVIGW-GS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGS 151 (417)
Q Consensus 106 ~~l~g~kkIgIIG~-G~-mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~ 151 (417)
..++| |++.|.|. |. +|.++++.|.+. |.+|++..|...
T Consensus 18 ~~l~~-k~vlITGasg~GIG~~~a~~l~~~------G~~V~~~~r~~~ 58 (266)
T 3o38_A 18 GLLKG-KVVLVTAAAGTGIGSTTARRALLE------GADVVISDYHER 58 (266)
T ss_dssp STTTT-CEEEESSCSSSSHHHHHHHHHHHT------TCEEEEEESCHH
T ss_pred cCCCC-CEEEEECCCCCchHHHHHHHHHHC------CCEEEEecCCHH
Confidence 34778 99999998 85 999999999999 999888777643
No 478
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.95 E-value=1.7 Score=42.48 Aligned_cols=95 Identities=15% Similarity=0.149 Sum_probs=61.9
Q ss_pred cCCCCEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh---ccCCeE
Q 014863 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI---SGSDLV 182 (417)
Q Consensus 108 l~g~kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav---~~ADiV 182 (417)
-.| ++|.|+| .|.+|...++-++.. |.+|++.. . ++..+.+++.|.... +....+..+.+ ...|+|
T Consensus 182 ~~g-~~VlV~Ga~G~vG~~~~qla~~~------Ga~Vi~~~-~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 182 CTG-KRVLILGASGGVGTFAIQVMKAW------DAHVTAVC-S-QDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp CTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEE-C-GGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEE
T ss_pred CCC-CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEe-C-hHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEE
Confidence 357 8999999 799999999999888 88876654 3 345777888886420 11112233333 358999
Q ss_pred EEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 183 LLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 183 iLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
|-++.... ..+......++++-.++..++
T Consensus 253 id~~g~~~--~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 253 LDNVGGST--ETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp EESSCTTH--HHHGGGGBCSSSCCEEEESCC
T ss_pred EECCCChh--hhhHHHHHhhcCCcEEEEeCC
Confidence 98887542 123445566777766665543
No 479
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=89.88 E-value=1.4 Score=42.85 Aligned_cols=90 Identities=10% Similarity=0.031 Sum_probs=60.4
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCch---hHHHHHHcCceecCCCcCCH--------Hhhh
Q 014863 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR---SFAEARAAGFTEENGTLGDI--------YETI 176 (417)
Q Consensus 109 ~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~---s~~~A~~~G~~~~d~~~~~~--------~Eav 176 (417)
.| .+|.|+|. |.+|...++-++.. |.++++..+.+.+ ..+.+++.|... +.+. .+..
T Consensus 167 ~g-~~VlV~Ga~G~vG~~aiqlak~~------Ga~vi~~~~~~~~~~~~~~~~~~lGa~~----vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 167 PG-DSVIQNASNSGVGQAVIQIAAAL------GLRTINVVRDRPDIQKLSDRLKSLGAEH----VITEEELRRPEMKNFF 235 (357)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEECCCSCHHHHHHHHHHTTCSE----EEEHHHHHSGGGGGTT
T ss_pred CC-CEEEEeCCcCHHHHHHHHHHHHc------CCEEEEEecCccchHHHHHHHHhcCCcE----EEecCcchHHHHHHHH
Confidence 56 89999998 99999999988888 9877666654332 346777888642 1121 1222
Q ss_pred c---cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 177 S---GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 177 ~---~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
. ..|+||-++..... .+....++++-.++..++
T Consensus 236 ~~~~~~Dvvid~~g~~~~----~~~~~~l~~~G~iv~~G~ 271 (357)
T 1zsy_A 236 KDMPQPRLALNCVGGKSS----TELLRQLARGGTMVTYGG 271 (357)
T ss_dssp SSSCCCSEEEESSCHHHH----HHHHTTSCTTCEEEECCC
T ss_pred hCCCCceEEEECCCcHHH----HHHHHhhCCCCEEEEEec
Confidence 2 47999999875433 234567787776665543
No 480
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.85 E-value=0.19 Score=49.77 Aligned_cols=35 Identities=31% Similarity=0.275 Sum_probs=30.4
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecC
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~ 149 (417)
+.+ +||+|||.|..|..+++.+++. |+++++.+..
T Consensus 10 ~~~-~~IlIlG~G~lg~~la~aa~~l------G~~viv~d~~ 44 (377)
T 3orq_A 10 KFG-ATIGIIGGGQLGKMMAQSAQKM------GYKVVVLDPS 44 (377)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESC
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEECC
Confidence 456 9999999999999999999999 9988776543
No 481
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=89.71 E-value=0.87 Score=44.43 Aligned_cols=91 Identities=19% Similarity=0.189 Sum_probs=58.5
Q ss_pred CCCCEEEEEcc-cchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceec-CCCcCCHHhhh----c--cCC
Q 014863 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI----S--GSD 180 (417)
Q Consensus 109 ~g~kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~-d~~~~~~~Eav----~--~AD 180 (417)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++ .+..+.+++.|.... |....+..+.+ . ..|
T Consensus 170 ~g-~~vlV~GasggiG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 170 AG-ESVLVHGASGGVGLAACQIARAY------GLKILGTAGT-EEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp TT-CEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEE
T ss_pred Cc-CEEEEECCCChHHHHHHHHHHHC------CCEEEEEeCC-hhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcE
Confidence 46 89999997 99999999999988 9887766654 444567777775310 11111222222 1 589
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+||.++... .+......++++-.++..
T Consensus 242 ~vi~~~G~~----~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 242 IIIEMLANV----NLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp EEEESCHHH----HHHHHHHHEEEEEEEEEC
T ss_pred EEEECCChH----HHHHHHHhccCCCEEEEE
Confidence 999988753 344445566666555543
No 482
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=89.63 E-value=1.6 Score=45.11 Aligned_cols=93 Identities=10% Similarity=0.105 Sum_probs=64.3
Q ss_pred ccCCCCEEEEEccc----------chHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHH-Hc------------Cce
Q 014863 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AA------------GFT 163 (417)
Q Consensus 107 ~l~g~kkIgIIG~G----------~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~-~~------------G~~ 163 (417)
.++| +||+|.|+- +-...++..|.+. |.+|.+++..-.. .+. .+ .+.
T Consensus 325 ~~~~-~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~------g~~v~~~DP~~~~---~~~~~~~~~~~~~~~~~~~~~ 394 (478)
T 2y0c_A 325 DLTG-RTFAIWGLAFKPNTDDMREAPSRELIAELLSR------GARIAAYDPVAQE---EARRVIALDLADHPSWLERLS 394 (478)
T ss_dssp CCTT-CEEEEECCSSSSSCCCCTTCHHHHHHHHHHHT------TCEEEEECTTTHH---HHHHHHHHHTTTCHHHHTTEE
T ss_pred cCCC-CEEEEEecccCCCCCccccChHHHHHHHHHHC------CCEEEEECCCccH---HHHHhhcccccccccccccee
Confidence 5788 999999973 3456778888887 9988776543221 221 12 233
Q ss_pred ecCCCcCCHHhhhccCCeEEEeecchhHHH-HHHHHHhcCCCCcEEEEeccc
Q 014863 164 EENGTLGDIYETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 164 ~~d~~~~~~~Eav~~ADiViLavpd~a~~~-Vl~eI~p~Lk~GaiL~~a~G~ 214 (417)
. +.+..+++++||+|+++|.-..... -++.+...|+. .+|+|.-++
T Consensus 395 ~----~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~-~~i~D~r~~ 441 (478)
T 2y0c_A 395 F----VDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKT-PVIFDGRNL 441 (478)
T ss_dssp E----CSSHHHHTTTCSEEEECSCCGGGGSCCHHHHHTTCSS-CEEEESSCC
T ss_pred e----cCCHHHHHhCCCEEEEecCChHhhccCHHHHHhhcCC-CEEEECCCC
Confidence 2 4578899999999999999877654 24567776754 678887764
No 483
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=89.61 E-value=0.31 Score=46.91 Aligned_cols=32 Identities=34% Similarity=0.510 Sum_probs=29.5
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecC
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~ 149 (417)
+||.|||.|.-|.+.|..|++. |++|.|..+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~------G~~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH------GIKVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCEEEEecC
Confidence 7899999999999999999999 9999888654
No 484
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=89.58 E-value=2 Score=39.78 Aligned_cols=89 Identities=12% Similarity=0.091 Sum_probs=55.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHH-hhhhhhcCCceEEEEecCCchhHHHHHHc----C----ceecCCCcCCHHhhhccC
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGSRSFAEARAA----G----FTEENGTLGDIYETISGS 179 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr-~s~~~~~~G~~Vivg~r~~~~s~~~A~~~----G----~~~~d~~~~~~~Eav~~A 179 (417)
.| .+|.-||||.-+. +..|. .. |.+| ++.+.+....+.+++. | +... ..+..+.-...
T Consensus 64 ~~-~~vLDiGcG~G~~--~~~l~~~~------~~~v-~gvd~s~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~~~f 130 (287)
T 1kpg_A 64 PG-MTLLDVGCGWGAT--MMRAVEKY------DVNV-VGLTLSKNQANHVQQLVANSENLRSKRVL---LAGWEQFDEPV 130 (287)
T ss_dssp TT-CEEEEETCTTSHH--HHHHHHHH------CCEE-EEEESCHHHHHHHHHHHHTCCCCSCEEEE---ESCGGGCCCCC
T ss_pred Cc-CEEEEECCcccHH--HHHHHHHc------CCEE-EEEECCHHHHHHHHHHHHhcCCCCCeEEE---ECChhhCCCCe
Confidence 46 8999999998433 33333 44 6655 5666655555555442 2 2211 23444433668
Q ss_pred CeEEEe-----ecchhHHHHHHHHHhcCCCCcEEEE
Q 014863 180 DLVLLL-----ISDAAQADNYEKIFSCMKPNSILGL 210 (417)
Q Consensus 180 DiViLa-----vpd~a~~~Vl~eI~p~Lk~GaiL~~ 210 (417)
|+|+.. +++.....+++++...|+||-.+++
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEE
Confidence 999876 3445567889999999999887653
No 485
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=89.56 E-value=0.29 Score=49.50 Aligned_cols=68 Identities=21% Similarity=0.130 Sum_probs=44.4
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC---HHhhhccCCeEE
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVL 183 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~Eav~~ADiVi 183 (417)
.+.| +||+|||.|..|..+++.+++. |+++++.+.. ..+......+.... ....+ +.++++++|+|+
T Consensus 32 ~~~~-~~IlIlG~G~lg~~~~~aa~~l------G~~v~v~d~~-~~~p~~~~ad~~~~--~~~~d~~~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 32 ILPG-AWLGMVGGGQLGRMFCFAAQSM------GYRVAVLDPD-PASPAGAVADRHLR--AAYDDEAALAELAGLCEAVS 101 (419)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-TTCHHHHHSSEEEC--CCTTCHHHHHHHHHHCSEEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCC-CcCchhhhCCEEEE--CCcCCHHHHHHHHhcCCEEE
Confidence 4567 9999999999999999999998 9998776533 22222222222321 11223 335567889888
Q ss_pred E
Q 014863 184 L 184 (417)
Q Consensus 184 L 184 (417)
.
T Consensus 102 ~ 102 (419)
T 4e4t_A 102 T 102 (419)
T ss_dssp E
T ss_pred E
Confidence 4
No 486
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=89.55 E-value=1 Score=41.83 Aligned_cols=90 Identities=17% Similarity=0.134 Sum_probs=59.5
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH----cCc--eecCCCcCCHHhhh--ccCC
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGF--TEENGTLGDIYETI--SGSD 180 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~----~G~--~~~d~~~~~~~Eav--~~AD 180 (417)
.+ ++|.-||+|.-. ++..+.+. |.+| ++.+.++...+.+++ .|. ... ..+..+.+ ...|
T Consensus 120 ~~-~~VLDiGcG~G~--l~~~la~~------g~~v-~gvDi~~~~v~~a~~n~~~~~~~v~~~---~~d~~~~~~~~~fD 186 (254)
T 2nxc_A 120 PG-DKVLDLGTGSGV--LAIAAEKL------GGKA-LGVDIDPMVLPQAEANAKRNGVRPRFL---EGSLEAALPFGPFD 186 (254)
T ss_dssp TT-CEEEEETCTTSH--HHHHHHHT------TCEE-EEEESCGGGHHHHHHHHHHTTCCCEEE---ESCHHHHGGGCCEE
T ss_pred CC-CEEEEecCCCcH--HHHHHHHh------CCeE-EEEECCHHHHHHHHHHHHHcCCcEEEE---ECChhhcCcCCCCC
Confidence 46 899999999933 44456666 6654 566666655555554 343 211 23554433 3579
Q ss_pred eEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 181 iViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
+|+...+......+++++...|+||..++++
T Consensus 187 ~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 187 LLVANLYAELHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp EEEEECCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCcHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 9998776666678888999999998877654
No 487
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=89.52 E-value=0.96 Score=44.09 Aligned_cols=71 Identities=20% Similarity=0.259 Sum_probs=46.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhH-HHHHH-cCceecCCC-cCC---HHhhhccCCeEEE
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AEARA-AGFTEENGT-LGD---IYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~-~~A~~-~G~~~~d~~-~~~---~~Eav~~ADiViL 184 (417)
|+|.|.| .|.+|.++++.|.+. |++|++..|+.++.. +.... .++...... +.+ ..++++++|+||.
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~ 79 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAV------GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 79 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHT------TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence 7899999 599999999999998 998887777644321 11111 133221111 222 4567889999997
Q ss_pred eecc
Q 014863 185 LISD 188 (417)
Q Consensus 185 avpd 188 (417)
+...
T Consensus 80 ~a~~ 83 (352)
T 1xgk_A 80 NTTS 83 (352)
T ss_dssp CCCS
T ss_pred cCCC
Confidence 7653
No 488
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.49 E-value=1.1 Score=44.74 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=30.4
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEe
Q 014863 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGL 147 (417)
Q Consensus 105 ~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~ 147 (417)
.+.|++ ++|.|||+|-.|.+++++|... |+ ++.+.+
T Consensus 29 ~~kL~~-~~VlIvGaGGlGs~va~~La~a------GVg~ItlvD 65 (340)
T 3rui_A 29 LDIIKN-TKVLLLGAGTLGCYVSRALIAW------GVRKITFVD 65 (340)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEEC
T ss_pred HHHHhC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEec
Confidence 357888 9999999999999999999998 77 455544
No 489
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=89.49 E-value=0.66 Score=47.83 Aligned_cols=32 Identities=25% Similarity=0.451 Sum_probs=29.1
Q ss_pred cccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEE
Q 014863 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK 144 (417)
Q Consensus 106 ~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vi 144 (417)
..++| ++|+|.|+|++|...|+-|.+. |.+|+
T Consensus 231 ~~l~g-~~vaVqGfGnVG~~~a~~L~e~------GakvV 262 (440)
T 3aog_A 231 LQVEG-ARVAIQGFGNVGNAAARAFHDH------GARVV 262 (440)
T ss_dssp CCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEE
T ss_pred CCccC-CEEEEeccCHHHHHHHHHHHHC------CCEEE
Confidence 36889 9999999999999999999998 88876
No 490
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=89.48 E-value=1 Score=38.32 Aligned_cols=91 Identities=16% Similarity=0.185 Sum_probs=58.4
Q ss_pred cCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH----cCc----eecCCCcCCHHhhh---
Q 014863 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGF----TEENGTLGDIYETI--- 176 (417)
Q Consensus 108 l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~----~G~----~~~d~~~~~~~Eav--- 176 (417)
..+ ++|.-||+|. | .++..+.+. +.++ ++.+.+....+.+++ .|. ... ..+..+.+
T Consensus 32 ~~~-~~vldiG~G~-G-~~~~~l~~~------~~~v-~~~D~~~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~~~~ 98 (192)
T 1l3i_A 32 GKN-DVAVDVGCGT-G-GVTLELAGR------VRRV-YAIDRNPEAISTTEMNLQRHGLGDNVTLM---EGDAPEALCKI 98 (192)
T ss_dssp CTT-CEEEEESCTT-S-HHHHHHHTT------SSEE-EEEESCHHHHHHHHHHHHHTTCCTTEEEE---ESCHHHHHTTS
T ss_pred CCC-CEEEEECCCC-C-HHHHHHHHh------cCEE-EEEECCHHHHHHHHHHHHHcCCCcceEEE---ecCHHHhcccC
Confidence 356 8999999998 3 445556665 5444 566665655555554 332 211 23444433
Q ss_pred ccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 177 ~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
...|+|+..-+......+++++...|++|..+++.
T Consensus 99 ~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~ 133 (192)
T 1l3i_A 99 PDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVT 133 (192)
T ss_dssp CCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEE
Confidence 35799998776566678899999999998766543
No 491
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=89.43 E-value=0.17 Score=51.51 Aligned_cols=79 Identities=15% Similarity=0.049 Sum_probs=56.4
Q ss_pred CEEEEEcc-cchHHHHHHHHHhhhhhhcCCc---eEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhccCCeEEEeec
Q 014863 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG~-G~mG~AiA~~Lr~s~~~~~~G~---~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~~ADiViLavp 187 (417)
.||.|||. |..|..-+.-++.- |. +|.+.+++. ...|.. . +.+.++|+||.++.
T Consensus 215 ~kV~ViG~~G~vG~~A~~~a~~l------Ga~~~~V~v~D~~~-------~~~g~~-----~----~~i~~aDivIn~vl 272 (394)
T 2qrj_A 215 PTVLIIGALGRCGSGAIDLLHKV------GIPDANILKWDIKE-------TSRGGP-----F----DEIPQADIFINCIY 272 (394)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT------TCCGGGEEEECHHH-------HTTCSC-----C----THHHHSSEEEECCC
T ss_pred CeEEEEcCCCHHHHHHHHHHHhC------CCCcCceEEeeccc-------cccCCc-----h----hhHhhCCEEEECcC
Confidence 58999999 99999988888777 86 787765531 112332 1 35679999999998
Q ss_pred chh-HHHHH-HHHHhcC-CCCcEEEEec
Q 014863 188 DAA-QADNY-EKIFSCM-KPNSILGLSH 212 (417)
Q Consensus 188 d~a-~~~Vl-~eI~p~L-k~GaiL~~a~ 212 (417)
-.. .+.++ ++....| |+|++|+|++
T Consensus 273 ig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 273 LSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp CCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred cCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 522 12344 4566778 9999999885
No 492
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=89.33 E-value=1.1 Score=41.40 Aligned_cols=71 Identities=15% Similarity=0.133 Sum_probs=46.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC---HHhhhccCCeEEEeec
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~Eav~~ADiViLavp 187 (417)
|||.|.| .|.+|.++++.|.+. .|++|++..|+.++.. .....++......+.+ ..++++++|+||.+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-----~g~~V~~~~R~~~~~~-~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 74 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-----HIDHFHIGVRNVEKVP-DDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPS 74 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-----TCTTEEEEESSGGGSC-GGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-----CCCcEEEEECCHHHHH-HhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 5799999 599999999998774 1578887777644321 1122343321111333 4567899999999876
Q ss_pred c
Q 014863 188 D 188 (417)
Q Consensus 188 d 188 (417)
+
T Consensus 75 ~ 75 (289)
T 3e48_A 75 I 75 (289)
T ss_dssp C
T ss_pred C
Confidence 4
No 493
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=89.32 E-value=0.99 Score=44.80 Aligned_cols=93 Identities=15% Similarity=0.134 Sum_probs=52.6
Q ss_pred CEEEEEcccchHHHHHHHHHh---hhhhhcCCceEEEEecC-CchhHHHHHHc----------------CceecCC---C
Q 014863 112 NQIGVIGWGSQGPAQAQNLRD---SLAEAKSDIVVKVGLRK-GSRSFAEARAA----------------GFTEENG---T 168 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~---s~~~~~~G~~Vivg~r~-~~~s~~~A~~~----------------G~~~~d~---~ 168 (417)
.||||+|+|.+|..+.+.|.+ . .+++++..++. +.+......++ .+.. ++ .
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~-----~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v-~g~~i~ 76 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRR-----AEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFV-GDDAIR 76 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGG-----GTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEE-TTEEEE
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCC-----CCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEE-CCEEEE
Confidence 589999999999999999876 3 04565444432 22222222210 0000 00 0
Q ss_pred ---cCCHHhh-hc--cCCeEEEeecchhHHHHHHHHHhcCCCCc--EEEEecc
Q 014863 169 ---LGDIYET-IS--GSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (417)
Q Consensus 169 ---~~~~~Ea-v~--~ADiViLavpd~a~~~Vl~eI~p~Lk~Ga--iL~~a~G 213 (417)
..++++. .. ++|+||.|+|.....+..+.+. +.|. +|+++.+
T Consensus 77 v~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l---~~GakkVVId~~a 126 (339)
T 2x5j_O 77 VLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHI---AAGAKKVLFSHPG 126 (339)
T ss_dssp EECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHH---HTTCSEEEESSCC
T ss_pred EEecCChHHCcccccCCCEEEECCCccccHHHHHHHH---HcCCCEEEEeccc
Confidence 1133332 11 7999999999887777665543 3454 3555444
No 494
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.32 E-value=0.63 Score=47.41 Aligned_cols=93 Identities=17% Similarity=0.192 Sum_probs=61.5
Q ss_pred ccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEecCC----ch-------hHHHHHHcCceecCCCcCCHHh
Q 014863 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG----SR-------SFAEARAAGFTEENGTLGDIYE 174 (417)
Q Consensus 107 ~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r~~----~~-------s~~~A~~~G~~~~d~~~~~~~E 174 (417)
.++. .||.|+|.|.-|.++|+-|... |. +|++.++++ .+ ....+.... . .....+++|
T Consensus 185 ~l~d-~kVVi~GAGaAG~~iA~ll~~~------Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~--~-~~~~~~L~e 254 (398)
T 2a9f_A 185 SLDE-VSIVVNGGGSAGLSITRKLLAA------GATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTN--R-EFKSGTLED 254 (398)
T ss_dssp CTTS-CEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTEECCTTCCCSCCC---CHHHHHS--C-TTCCCSCSH
T ss_pred CCCc-cEEEEECCCHHHHHHHHHHHHc------CCCeEEEEECCCcccCCccccchHHHHHHhhccC--c-ccchhhHHH
Confidence 4555 7999999999999999999988 88 888877652 11 112222211 0 011356899
Q ss_pred hhccCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEec
Q 014863 175 TISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (417)
Q Consensus 175 av~~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a~ 212 (417)
+++++|++|=+..|... -+++...|+++.+|...+
T Consensus 255 av~~ADV~IG~Sapgl~---T~EmVk~Ma~~pIIfals 289 (398)
T 2a9f_A 255 ALEGADIFIGVSAPGVL---KAEWISKMAARPVIFAMA 289 (398)
T ss_dssp HHHTTCSEEECCSTTCC---CHHHHHTSCSSCEEEECC
T ss_pred HhccCCEEEecCCCCCC---CHHHHHhhCCCCEEEECC
Confidence 99999998766544322 134556688888887443
No 495
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=89.24 E-value=0.28 Score=48.85 Aligned_cols=87 Identities=21% Similarity=0.195 Sum_probs=53.7
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc---eEEEEecCCc--hhHHHHHHcCceecCCCcCC-HHhhhccCCeEEE
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGS--RSFAEARAAGFTEENGTLGD-IYETISGSDLVLL 184 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~---~Vivg~r~~~--~s~~~A~~~G~~~~d~~~~~-~~Eav~~ADiViL 184 (417)
+||+||| .|..|.-+.+-|.+. .+ ++.......+ +.... .|... .+.+ ..+.+.++|+||+
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h------~fp~~el~~~~s~~~aG~~~~~---~~~~~---~~~~~~~~~~~~~Dvvf~ 69 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDER------DFPASAVRFFASARSQGRKLAF---RGQEI---EVEDAETADPSGLDIALF 69 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT------TCCEEEEEEEECTTTSSCEEEE---TTEEE---EEEETTTSCCTTCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCceEEEEEECcccCCCceee---cCCce---EEEeCCHHHhccCCEEEE
Confidence 6899999 799999999877765 32 3333221111 11110 11110 0111 1234678999999
Q ss_pred eecchhHHHHHHHHHhcCCCCcEEEEecc
Q 014863 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (417)
Q Consensus 185 avpd~a~~~Vl~eI~p~Lk~GaiL~~a~G 213 (417)
|+|.....+..+.+. +.|..|++.++
T Consensus 70 a~~~~~s~~~a~~~~---~~G~~vID~Sa 95 (344)
T 3tz6_A 70 SAGSAMSKVQAPRFA---AAGVTVIDNSS 95 (344)
T ss_dssp CSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CCChHHHHHHHHHHH---hCCCEEEECCC
Confidence 999988888877654 46888887766
No 496
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=89.20 E-value=0.72 Score=38.48 Aligned_cols=92 Identities=18% Similarity=0.122 Sum_probs=54.8
Q ss_pred CEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeecch
Q 014863 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (417)
Q Consensus 112 kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~~~Eav~--~ADiViLavpd~ 189 (417)
+++.|||.|..|..++..|++. .|++++...+.+...... .-.|+... + ..+..+.++ +.|.|++++|..
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~-----~g~~vvg~~d~~~~~~g~-~i~g~pV~-g-~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQG-----KEFHPIAFIDDDRKKHKT-TMQGITIY-R-PKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-----SSEEEEEEECSCGGGTTC-EETTEEEE-C-GGGHHHHHHHHTCCEEEECCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCcEEEEEEECCcccCCC-EecCeEEE-C-HHHHHHHHHHCCCCEEEEeCCCC
Confidence 7899999999999999999875 167776555554321110 11354431 1 234455443 579999999965
Q ss_pred hH---HHHHHHHHhcCCCCcEEEEeccc
Q 014863 190 AQ---ADNYEKIFSCMKPNSILGLSHGF 214 (417)
Q Consensus 190 a~---~~Vl~eI~p~Lk~GaiL~~a~G~ 214 (417)
.. .+++..+. +.|..+.+...+
T Consensus 77 ~~~~~~~i~~~l~---~~gv~v~~vP~~ 101 (141)
T 3nkl_A 77 SQVQKKVIIESLA---KLHVEVLTIPNL 101 (141)
T ss_dssp CHHHHHHHHHHHH---TTTCEEEECCCH
T ss_pred CHHHHHHHHHHHH---HcCCeEEECCCH
Confidence 43 23443332 345556555554
No 497
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=89.15 E-value=0.67 Score=43.80 Aligned_cols=69 Identities=17% Similarity=0.136 Sum_probs=45.5
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHHcCceecCCCcCC---HHhhhccCCeEEEeec
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~~G~~~~d~~~~~---~~Eav~~ADiViLavp 187 (417)
|+|.|.| .|.+|.++++.|.+. |++|++..|...+. +.....++......+.+ ..++++++|+||.+..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~-~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAA------GHDLVLIHRPSSQI-QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEECTTSCG-GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEecChHhh-hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 7999999 599999999999998 99988877764332 11111243211111233 4467889999998865
No 498
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=89.07 E-value=0.81 Score=45.40 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=31.3
Q ss_pred ccccCCCCEEEEEcccchHHHHHHHHHhhhhhhcCCc-eEEEEec
Q 014863 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (417)
Q Consensus 105 ~~~l~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~-~Vivg~r 148 (417)
.+.|++ .+|.|||+|-.|..++++|..+ |+ ++.+.++
T Consensus 113 q~~L~~-~~VlvvG~GglGs~va~~La~a------Gvg~i~lvD~ 150 (353)
T 3h5n_A 113 QDKLKN-AKVVILGCGGIGNHVSVILATS------GIGEIILIDN 150 (353)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEEEC
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHhC------CCCeEEEECC
Confidence 467888 9999999999999999999998 76 5555554
No 499
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=89.06 E-value=1.7 Score=36.86 Aligned_cols=91 Identities=13% Similarity=0.087 Sum_probs=54.4
Q ss_pred CCCCEEEEEcccchHHHHHHHHHhhhhhhcCCceEEEEecCCchhHHHHHH----cCce---ecCCCcCCHHhhh----c
Q 014863 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGFT---EENGTLGDIYETI----S 177 (417)
Q Consensus 109 ~g~kkIgIIG~G~mG~AiA~~Lr~s~~~~~~G~~Vivg~r~~~~s~~~A~~----~G~~---~~d~~~~~~~Eav----~ 177 (417)
.+ ++|.-||+|. | .++..+.+.. .+.+| ++.+.+....+.|++ .|.. .. ..+..+.+ .
T Consensus 25 ~~-~~vldiG~G~-G-~~~~~l~~~~----~~~~v-~~vD~~~~~~~~a~~~~~~~~~~~~~~~---~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 25 PH-ETLWDIGGGS-G-SIAIEWLRST----PQTTA-VCFEISEERRERILSNAINLGVSDRIAV---QQGAPRAFDDVPD 93 (178)
T ss_dssp TT-EEEEEESTTT-T-HHHHHHHTTS----SSEEE-EEECSCHHHHHHHHHHHHTTTCTTSEEE---ECCTTGGGGGCCS
T ss_pred CC-CeEEEeCCCC-C-HHHHHHHHHC----CCCeE-EEEeCCHHHHHHHHHHHHHhCCCCCEEE---ecchHhhhhccCC
Confidence 45 7999999997 3 3444444431 03344 567766655666654 2322 10 12221222 5
Q ss_pred cCCeEEEeecchhHHHHHHHHHhcCCCCcEEEEe
Q 014863 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (417)
Q Consensus 178 ~ADiViLavpd~a~~~Vl~eI~p~Lk~GaiL~~a 211 (417)
..|+|++.-+... ..+++++...|+||..+++.
T Consensus 94 ~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 94 NPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp CCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEE
T ss_pred CCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEE
Confidence 6899997766544 67888899999998876644
No 500
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=89.03 E-value=0.33 Score=48.04 Aligned_cols=69 Identities=7% Similarity=-0.082 Sum_probs=41.9
Q ss_pred CEEEEEc-ccchHHHHHHHHHhhhhhhcCCc--e-----EEEEecCCc--hhHHHHHH--cC---ceecCCCcCCHHhhh
Q 014863 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--V-----VKVGLRKGS--RSFAEARA--AG---FTEENGTLGDIYETI 176 (417)
Q Consensus 112 kkIgIIG-~G~mG~AiA~~Lr~s~~~~~~G~--~-----Vivg~r~~~--~s~~~A~~--~G---~~~~d~~~~~~~Eav 176 (417)
+||+|+| .|.+|.+++..|... ++ + +.+.+.... .....+.+ +. +...-....+..+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~------~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNG------SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHhC------CCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHh
Confidence 6899999 899999999999876 54 3 555444321 11222221 11 100000024567889
Q ss_pred ccCCeEEEee
Q 014863 177 SGSDLVLLLI 186 (417)
Q Consensus 177 ~~ADiViLav 186 (417)
++||+||++-
T Consensus 78 ~daDvVvitA 87 (333)
T 5mdh_A 78 KDLDVAILVG 87 (333)
T ss_dssp TTCSEEEECC
T ss_pred CCCCEEEEeC
Confidence 9999999975
Done!