Query         014864
Match_columns 417
No_of_seqs    358 out of 2121
Neff          10.7
Searched_HMMs 13730
Date          Mon Mar 25 19:11:30 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014864.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014864hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1wa5b_ a.118.1.1 (B:) Karyoph 100.0 9.1E-54 6.6E-58  411.7  33.6  406    8-415     2-419 (503)
  2 d1q1sc_ a.118.1.1 (C:) Importi 100.0 3.6E-39 2.6E-43  303.5  41.4  342   73-415    13-359 (434)
  3 d1wa5b_ a.118.1.1 (B:) Karyoph 100.0 4.2E-33 3.1E-37  266.9  33.8  324   73-400   119-447 (503)
  4 d1q1sc_ a.118.1.1 (C:) Importi 100.0 2.5E-32 1.8E-36  256.4  34.5  339   73-415    56-407 (434)
  5 d1jdha_ a.118.1.1 (A:) beta-Ca 100.0 3.9E-29 2.8E-33  240.6  26.2  320   73-401    17-341 (529)
  6 d1jdha_ a.118.1.1 (A:) beta-Ca 100.0   2E-28 1.5E-32  235.6  27.4  335   73-415    59-399 (529)
  7 d1xm9a1 a.118.1.24 (A:244-700)  99.9 9.7E-25 7.1E-29  204.2  27.7  322   74-401     3-451 (457)
  8 d1xm9a1 a.118.1.24 (A:244-700)  99.9 5.1E-24 3.7E-28  199.2  23.7  294  116-415     2-421 (457)
  9 d1xqra1 a.118.1.21 (A:87-350)   99.9 1.8E-20 1.3E-24  162.7  20.5  194  131-325    31-226 (264)
 10 d1xqra1 a.118.1.21 (A:87-350)   99.8 1.3E-19 9.5E-24  157.2  18.9  197  170-368    28-226 (264)
 11 d1b3ua_ a.118.1.2 (A:) Constan  99.6 6.2E-14 4.5E-18  135.3  21.5  304   75-399   283-587 (588)
 12 d1b3ua_ a.118.1.2 (A:) Constan  99.5 1.7E-13 1.3E-17  132.0  21.0  308   75-403   244-552 (588)
 13 d2vglb_ a.118.1.10 (B:) Adapti  99.5 1.4E-12 9.9E-17  125.0  19.2  300   73-397    83-414 (579)
 14 d1oyza_ a.118.1.16 (A:) Hypoth  99.5 2.3E-11 1.7E-15  104.9  25.1  253   74-395    20-274 (276)
 15 d2vglb_ a.118.1.10 (B:) Adapti  99.4 2.8E-12   2E-16  122.9  19.6  295   73-398    10-307 (579)
 16 d1qbkb_ a.118.1.1 (B:) Karyoph  99.4 5.8E-13 4.2E-17  134.7  11.9  303   87-401   371-780 (888)
 17 d1oyza_ a.118.1.16 (A:) Hypoth  99.3 2.9E-10 2.1E-14   97.8  24.1  230  115-400    18-247 (276)
 18 d1u6gc_ a.118.1.2 (C:) Cullin-  99.3 1.6E-10 1.2E-14  120.3  25.4  316   75-399     5-400 (1207)
 19 d2vgla_ a.118.1.10 (A:) Adapti  99.3 1.1E-09 8.1E-14  104.6  28.6  294   73-400    66-426 (584)
 20 d1qbkb_ a.118.1.1 (B:) Karyoph  99.3 1.1E-11 7.9E-16  125.2  14.7  318   76-400   398-821 (888)
 21 d1ibrb_ a.118.1.1 (B:) Importi  99.2 1.4E-10   1E-14  107.2  15.4  277  116-400   127-437 (458)
 22 d1ibrb_ a.118.1.1 (B:) Importi  99.2 2.2E-10 1.6E-14  105.8  14.7  296   74-379   128-455 (458)
 23 d1u6gc_ a.118.1.2 (C:) Cullin-  99.0 5.6E-09 4.1E-13  108.4  18.9  276  117-400   131-461 (1207)
 24 d2bpta1 a.118.1.1 (A:1-861) Im  99.0 2.8E-08   2E-12   98.9  22.0  313   76-400    98-441 (861)
 25 d1qgra_ a.118.1.1 (A:) Importi  98.9 1.4E-08   1E-12  101.4  18.3  315   74-399   129-479 (876)
 26 d2bpta1 a.118.1.1 (A:1-861) Im  98.9 4.5E-09 3.3E-13  104.7  13.6  311   80-401   376-713 (861)
 27 d2vgla_ a.118.1.10 (A:) Adapti  98.9 3.3E-08 2.4E-12   94.2  18.6  260   74-357   104-425 (584)
 28 d1ho8a_ a.118.1.9 (A:) Regulat  98.8 2.4E-07 1.7E-11   82.7  18.8  276   76-357   125-473 (477)
 29 d1qgra_ a.118.1.1 (A:) Importi  98.8 1.1E-07 7.9E-12   94.8  17.8  311   76-400    93-438 (876)
 30 d1ho8a_ a.118.1.9 (A:) Regulat  98.7 1.2E-06 8.9E-11   78.0  20.5  321   74-399    75-473 (477)
 31 d1te4a_ a.118.1.16 (A:) MTH187  98.5 5.9E-09 4.3E-13   76.0   0.7  109  252-395     1-109 (111)
 32 d1te4a_ a.118.1.16 (A:) MTH187  98.4 1.8E-08 1.3E-12   73.4   0.6  108  126-268     2-109 (111)
 33 d1upka_ a.118.1.15 (A:) Mo25 p  97.7 0.00089 6.5E-08   55.7  15.9  240  155-397    65-321 (330)
 34 d1upka_ a.118.1.15 (A:) Mo25 p  97.6  0.0034 2.5E-07   52.1  18.0  201  196-401    64-276 (330)
 35 d1lrva_ a.118.1.5 (A:) Leucine  97.4 0.00012 8.6E-09   59.6   6.5  176  124-392    50-231 (233)
 36 d1lrva_ a.118.1.5 (A:) Leucine  97.0 0.00025 1.8E-08   57.6   4.5  157  118-349    68-230 (233)
 37 d1lsha1 a.118.4.1 (A:285-620)   96.8   0.068 4.9E-06   45.5  18.8  200  117-358    89-309 (336)
 38 d1lsha1 a.118.4.1 (A:285-620)   96.7    0.15 1.1E-05   43.3  25.9  207  160-404    89-313 (336)
 39 d1wa5c_ a.118.1.1 (C:) Exporti  96.5   0.024 1.7E-06   55.9  15.4  306   85-410   470-802 (959)
 40 d1wa5c_ a.118.1.1 (C:) Exporti  96.2   0.025 1.8E-06   55.8  14.0  260  133-398   377-669 (959)
 41 d2bnxa1 a.118.1.23 (A:133-475)  95.8    0.39 2.9E-05   40.7  17.7  159   76-235     5-186 (343)
 42 d2bnxa1 a.118.1.23 (A:133-475)  93.5     1.8 0.00013   36.4  18.0  167  147-345    34-218 (343)
 43 d2jaka1 a.118.1.20 (A:30-372)   92.6     0.6 4.4E-05   39.2  11.2  193  153-352   127-321 (343)
 44 d1ujka_ a.118.9.2 (A:) ADP-rib  84.9    0.98 7.1E-05   32.6   6.0   75   73-147    45-124 (145)
 45 d1dvpa1 a.118.9.2 (A:1-145) Hr  83.5    0.82   6E-05   33.1   5.1   74  160-233    43-117 (145)
 46 d2jaka1 a.118.1.20 (A:30-372)   82.8    0.95 6.9E-05   37.9   5.8  180   75-266   135-320 (343)
 47 d2b6ca1 a.118.1.17 (A:3-215) H  82.5     8.6 0.00063   29.4  13.2  137  250-413    57-196 (213)
 48 d1ujka_ a.118.9.2 (A:) ADP-rib  80.2     3.5 0.00026   29.5   7.5   74  160-233    46-125 (145)
 49 d1dvpa1 a.118.9.2 (A:1-145) Hr  80.1    0.61 4.5E-05   33.8   3.2   74   73-146    42-115 (145)
 50 d1mhqa_ a.118.9.2 (A:) ADP-rib  78.0     1.7 0.00012   31.2   5.1   74   73-146    38-116 (143)
 51 d1mhqa_ a.118.9.2 (A:) ADP-rib  71.4       3 0.00022   29.8   5.0   74  160-233    39-118 (143)
 52 d1juqa_ a.118.9.2 (A:) ADP-rib  63.9     4.2  0.0003   29.3   4.5   75   73-147    39-118 (151)
 53 d2b6ca1 a.118.1.17 (A:3-215) H  48.7      49  0.0036   24.8  12.9  141  120-285    54-196 (213)
 54 d1w9ca_ a.118.1.19 (A:) Export  48.3      64  0.0047   26.0  13.9  134  174-314    44-196 (321)
 55 d1juqa_ a.118.9.2 (A:) ADP-rib  43.5      49  0.0036   23.2   9.1   97  294-400    15-118 (151)
 56 d1t06a_ a.118.1.17 (A:) Hypoth  37.8      26  0.0019   27.0   5.6   81   76-157   111-191 (235)
 57 d1elka_ a.118.9.2 (A:) Tom1 pr  33.0      30  0.0022   24.5   4.8   72   74-145    50-125 (153)
 58 d1t06a_ a.118.1.17 (A:) Hypoth  32.2      19  0.0014   27.9   3.8   66  329-400   110-181 (235)
 59 d1l5ja1 a.118.15.1 (A:1-160) A  31.2      44  0.0032   23.7   5.3  115  287-416    27-142 (160)
 60 d1szaa_ a.118.9.4 (A:) PCF11 p  27.3      62  0.0045   22.4   5.7   89  256-355    24-112 (144)
 61 d1szaa_ a.118.9.4 (A:) PCF11 p  21.4 1.2E+02  0.0087   20.8   7.3   68  329-397    45-112 (144)
 62 d1hf8a2 a.118.9.3 (A:19-149) C  20.7 1.2E+02  0.0085   20.4   6.5   42  372-413    42-83  (131)
 63 d1w9ca_ a.118.1.19 (A:) Export  20.5   2E+02   0.014   22.9  13.4  137  218-357    45-196 (321)
 64 d1elka_ a.118.9.2 (A:) Tom1 pr  20.5   1E+02  0.0075   21.5   5.8   72  160-231    50-126 (153)

No 1  
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=9.1e-54  Score=411.67  Aligned_cols=406  Identities=54%  Similarity=0.807  Sum_probs=352.8

Q ss_pred             CchHhhhhcCC-C-CCchHHhhhhhhHHHHHHHHhhhHHHHhhhhhcccCCCCC-ccC------CCCCchhhhccCHHHH
Q 014864            8 KADSRRNKYKV-A-VDADEGRRRREDNMVEIRKNKREESLQKKRREGLQNQQPL-AND------VNAPGTAKKLENLPVM   78 (417)
Q Consensus         8 ~~~~~~~~~k~-~-~~~~~~~~~r~~~~~~lrk~~r~~~l~~~r~~~~~~~~~~-~~~------~~~~~~~~~~~~l~~l   78 (417)
                      .+++|++.||+ | .+++|+||||+++.++|||+||++.++|||+.....+... +..      ..........+.++.+
T Consensus         2 ~~~~~~~~~~~~~~~~~~e~r~kR~~~~veiRk~kr~e~l~kkR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   81 (503)
T d1wa5b_           2 VPEYRRTNFKNKGRFSADELRRRRDTQQVELRKAKRDEALAKRRNFIPPTDGADSDEEDESSVSADQQFYSQLQQELPQM   81 (503)
T ss_dssp             CCGGGCC-----------CCCCCTTSSCCCCSCCCCCSCCSCCCCC----------------------------CCHHHH
T ss_pred             CchHHhHHhccCCCCChHHHHHHHHHHHHHHhHHHHHHHHHhhcCCCcccccccccchhccccchhhHHHHHHHHHHHHH
Confidence            57899999999 6 4999999999999999999999999999997543221110 000      0111112223578999


Q ss_pred             HhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHHHHhC
Q 014864           79 VAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDH  158 (417)
Q Consensus        79 ~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~  158 (417)
                      ++.+.++|...+..|+..++++++.+.+++++.+++.|++|.|+.+++.+.++.++..|+|+|++++.+++.....+.+.
T Consensus        82 ~~~~~s~~~~~~~~a~~~~r~~ls~~~~~~i~~ii~~g~i~~Lv~~l~~~~~~~iq~~a~~~L~ni~~~~~~~~~~~~~~  161 (503)
T d1wa5b_          82 TQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDA  161 (503)
T ss_dssp             HHHHSCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHhcCCCchHHHHHHCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHhC
Confidence            99999999999999999999999887788899999999999999999976658899999999999999989999999999


Q ss_pred             CChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCC-CCCC
Q 014864          159 GAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGK-PQPP  237 (417)
Q Consensus       159 g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~-~~~~  237 (417)
                      |+++.++.+|.+++.++++.|+|+|+||+.+++.++..+.+.|++++++.++ .+.+..+++.++|++++++... +...
T Consensus       162 g~i~~l~~lL~s~~~~i~~~a~~~L~nia~~~~~~r~~l~~~~~~~~L~~ll-~~~~~~~~~~~~~~l~nl~~~~~~~~~  240 (503)
T d1wa5b_         162 DAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-NSNKPSLIRTATWTLSNLCRGKKPQPD  240 (503)
T ss_dssp             TCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGG-GSCCHHHHHHHHHHHHHHHCCSSSCCC
T ss_pred             CChHHHHHHhcCCChhHHHHHHHHHHHHhhhhHHHHHHHHhhcccccchhhc-ccCCHHHHHHHHHHHHHHhcCCccchH
Confidence            9999999999999999999999999999999999999999999999999999 6777889999999999999876 5556


Q ss_pred             hhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhhcCCh
Q 014864          238 FDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDD  317 (417)
Q Consensus       238 ~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~  317 (417)
                      .....+++|.+..++.++|++++..++|++.+++.+.++....+++.|+++.++.++.++++.++..++.++++++.+.+
T Consensus       241 ~~~~~~~l~~l~~~l~~~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~nl~~~~~  320 (503)
T d1wa5b_         241 WSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGND  320 (503)
T ss_dssp             HHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCH
T ss_pred             HHHHHHHHHHHHHHhccccHHHHHHHHHHHHhhccCCchhhhhhhhhhhhhhhhhcccCCchhhhhhHHHHHHHHHHHHH
Confidence            66778999999999999999999999999999999998888889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHHHHh
Q 014864          318 MQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNA  397 (417)
Q Consensus       318 ~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl  397 (417)
                      .....+++.|+++.+..+++++ ++.+++.++|+|+|++.++++....+++.|+++.++.++.+++++++.+|+|+|+|+
T Consensus       321 ~~~~~~~~~~~l~~l~~ll~~~-~~~i~~~~~~~l~nl~~~~~~~~~~i~~~~~l~~li~~l~~~~~~v~~~a~~~l~nl  399 (503)
T d1wa5b_         321 LQTQVVINAGVLPALRLLLSSP-KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNA  399 (503)
T ss_dssp             HHHHHHHHTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred             HHHHhhhccchHHHHHHHhcCC-CHHHHHHHHHHHHHHhhccHHHHHHHHHccccchhHHhcccCChhHHHHHHHHHHHH
Confidence            9999899999999999999998 999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCC--CHHHHHHHHhcCcc
Q 014864          398 TSGG--THEQIKYEHTFCTI  415 (417)
Q Consensus       398 ~~~~--~~~~~~~l~~~g~i  415 (417)
                      +..+  ..+++.++++.|++
T Consensus       400 ~~~~~~~~~~~~~l~~~~~l  419 (503)
T d1wa5b_         400 SSGGLQRPDIIRYLVSQGCI  419 (503)
T ss_dssp             HHHTTTCTHHHHHHHHTTCH
T ss_pred             HhcccccHHHHHHHHHCCcH
Confidence            9865  35778899988865


No 2  
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=3.6e-39  Score=303.45  Aligned_cols=342  Identities=52%  Similarity=0.843  Sum_probs=316.0

Q ss_pred             cCHHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhH
Q 014864           73 ENLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHT  152 (417)
Q Consensus        73 ~~l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~  152 (417)
                      ++++.+++.+.+++++.+..|+..++++++...++.++.+++.|++|.|+++|++.++++++..|+++|.+++.++++.+
T Consensus        13 ~~i~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~~~~~~   92 (434)
T d1q1sc_          13 WSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQT   92 (434)
T ss_dssp             CCHHHHHHHHTSSCHHHHHHHHHHHHHHHHSSSCCCHHHHHHTTCHHHHHHHTTCGGGHHHHHHHHHHHHHHHTSCHHHH
T ss_pred             hhHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHhcCChhhh
Confidence            67999999999999999999999999998877677788999999999999999876558899999999999999888999


Q ss_pred             HHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCc----hhHHHHHHHHHhh
Q 014864          153 KVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPK----LSMLRNATWTLSN  228 (417)
Q Consensus       153 ~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~----~~~~~~a~~~l~~  228 (417)
                      ..+++.|+++.|+.+|.+++.++++.|+++|+|++.+++.++..+.+.|+++.++.++.....    ....+.++|++.+
T Consensus        93 ~~i~~~~~i~~l~~~L~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~  172 (434)
T d1q1sc_          93 KAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSN  172 (434)
T ss_dssp             HHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHH
T ss_pred             hHhhhccchhhhhhccccCCHHHHHHHHHHHHHHhccchHHHHHHHHhhhhhHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999954332    3567889999999


Q ss_pred             hhcCC-CCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHH
Q 014864          229 FCRGK-PQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALR  307 (417)
Q Consensus       229 l~~~~-~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~  307 (417)
                      ++... +........+++|.+..++.+++++++..++|++++++..+++....+...|+++.++.++.++++.++..+++
T Consensus       173 ~~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~  252 (434)
T d1q1sc_         173 LCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALR  252 (434)
T ss_dssp             HTCCCTTCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHH
T ss_pred             HhhcccccchhhhhhhHHHHHHHHHhccccchhhhHHhhhcccchhhhhhHHHHhhcccchhcccccccchhhhhhchhh
Confidence            99876 34445566889999999999999999999999999999998888888889999999999999999999999999


Q ss_pred             HHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhccCCHHHH
Q 014864          308 TVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIK  387 (417)
Q Consensus       308 ~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~  387 (417)
                      +|++++.+++.....+++.|+++.+..++.++ ++.++..|+|+|+|++.++++....+.+.|+++.++.++.+++++++
T Consensus       253 ~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~-~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~~~~~~v~  331 (434)
T d1q1sc_         253 AIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP-KTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQ  331 (434)
T ss_dssp             HHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCS-SHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHH
T ss_pred             hhhhHHhhhhHHHHHHHhccccchHHHhhccc-chhhhHHHHHHHhhhccccchhHHHHhhhhhHHHHHHHHhccChHHH
Confidence            99999999998888899999999999999998 99999999999999999889999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCCCHHHHHHHHhcCcc
Q 014864          388 KEAAWAISNATSGGTHEQIKYEHTFCTI  415 (417)
Q Consensus       388 ~~a~~~L~nl~~~~~~~~~~~l~~~g~i  415 (417)
                      ..|+|+|+|++..++.+++.++++.|++
T Consensus       332 ~~a~~~l~nl~~~~~~~~~~~l~~~~~i  359 (434)
T d1q1sc_         332 KEAAWAITNYTSGGTVEQIVYLVHCGII  359 (434)
T ss_dssp             HHHHHHHHHHHHHSCHHHHHHHHHTTCH
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHCCcH
Confidence            9999999999999999999999998875


No 3  
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=4.2e-33  Score=266.89  Aligned_cols=324  Identities=25%  Similarity=0.345  Sum_probs=291.2

Q ss_pred             cCHHHHHhhhcC-CChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchh
Q 014864           73 ENLPVMVAGVWS-NDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEH  151 (417)
Q Consensus        73 ~~l~~l~~~l~s-~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~  151 (417)
                      +.+|.++..+++ .++.++..|+++|.++.+.. +.....+.+.|+++.++.+|.+++ .+++..|+|+|+|++..+++.
T Consensus       119 g~i~~Lv~~l~~~~~~~iq~~a~~~L~ni~~~~-~~~~~~~~~~g~i~~l~~lL~s~~-~~i~~~a~~~L~nia~~~~~~  196 (503)
T d1wa5b_         119 GVVPRLVEFMRENQPEMLQLEAAWALTNIASGT-SAQTKVVVDADAVPLFIQLLYTGS-VEVKEQAIWALGNVAGDSTDY  196 (503)
T ss_dssp             TCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSC-HHHHHHHHHTTCHHHHHHHHHHCC-HHHHHHHHHHHHHHHTTCHHH
T ss_pred             CChHHHHHHHcCCCCHHHHHHHHHHHHHHHcCC-HHHHHHHHhCCChHHHHHHhcCCC-hhHHHHHHHHHHHHhhhhHHH
Confidence            679999999986 56789999999999998764 556677889999999999999988 899999999999999988999


Q ss_pred             HHHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhc
Q 014864          152 TKVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCR  231 (417)
Q Consensus       152 ~~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~  231 (417)
                      +..+.+.|+++.|+.++.+.+..++..++|+|.|++.............++++.++.++ .+.+.+++..++|++.+++.
T Consensus       197 r~~l~~~~~~~~L~~ll~~~~~~~~~~~~~~l~nl~~~~~~~~~~~~~~~~l~~l~~~l-~~~d~~~~~~~~~~l~~l~~  275 (503)
T d1wa5b_         197 RDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLI-YSMDTETLVDACWAISYLSD  275 (503)
T ss_dssp             HHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHT-TCCCHHHHHHHHHHHHHHHS
T ss_pred             HHHHHhhcccccchhhcccCCHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHhhcc
Confidence            99999999999999999999999999999999999976554555556678899999999 78889999999999999998


Q ss_pred             CCCCC-ChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHH
Q 014864          232 GKPQP-PFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVG  310 (417)
Q Consensus       232 ~~~~~-~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~  310 (417)
                      ..+.. ......++++.++.++.++++.+...++.++++++.+.+.....+.+.|+++.+..++.++++.++..++++|+
T Consensus       276 ~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~nl~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~i~~~~~~~l~  355 (503)
T d1wa5b_         276 GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTIS  355 (503)
T ss_dssp             SCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred             CCchhhhhhhhhhhhhhhhhcccCCchhhhhhHHHHHHHHHHHHHHHHHhhhccchHHHHHHHhcCCCHHHHHHHHHHHH
Confidence            65332 22333688999999999999999999999999999999888888999999999999999999999999999999


Q ss_pred             HhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhc---CCHHHHHHHHHCCCHHHHHHHhccCCHHHH
Q 014864          311 NIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITA---GNREQIQAVIEANIIGPLVALLENAEFDIK  387 (417)
Q Consensus       311 ~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~---~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~  387 (417)
                      |++.+++.....+++.|+++.++.++.+. +..++.+|+|+|+|++.   ..++.+..+++.|+++.|+++|...+.++.
T Consensus       356 nl~~~~~~~~~~i~~~~~l~~li~~l~~~-~~~v~~~a~~~l~nl~~~~~~~~~~~~~l~~~~~l~~l~~~L~~~d~~~~  434 (503)
T d1wa5b_         356 NITAGNTEQIQAVIDANLIPPLVKLLEVA-EYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRII  434 (503)
T ss_dssp             HHTTSCHHHHHHHHHTTCHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHH
T ss_pred             HHhhccHHHHHHHHHccccchhHHhcccC-ChhHHHHHHHHHHHHHhcccccHHHHHHHHHCCcHHHHHHHhcCCCHHHH
Confidence            99999999999899999999999999998 99999999999999986   245678889999999999999999999999


Q ss_pred             HHHHHHHHHhhCC
Q 014864          388 KEAAWAISNATSG  400 (417)
Q Consensus       388 ~~a~~~L~nl~~~  400 (417)
                      ..++.+|.++...
T Consensus       435 ~~~L~~l~~ll~~  447 (503)
T d1wa5b_         435 EVTLDALENILKM  447 (503)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998753


No 4  
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=2.5e-32  Score=256.37  Aligned_cols=339  Identities=26%  Similarity=0.395  Sum_probs=294.0

Q ss_pred             cCHHHHHhhhcC-CChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchh
Q 014864           73 ENLPVMVAGVWS-NDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEH  151 (417)
Q Consensus        73 ~~l~~l~~~l~s-~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~  151 (417)
                      +.+|.|++.|++ +++.+|..|+++|.++++.. ++....+++.|++|.|+.+|.+++ ++++..|+++|++++.++++.
T Consensus        56 g~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~~-~~~~~~i~~~~~i~~l~~~L~~~~-~~~~~~a~~~L~nl~~~~~~~  133 (434)
T d1q1sc_          56 GLIPKFVSFLGKTDCSPIQFESAWALTNIASGT-SEQTKAVVDGGAIPAFISLLASPH-AHISEQAVWALGNIAGDGSAF  133 (434)
T ss_dssp             TCHHHHHHHTTCGGGHHHHHHHHHHHHHHHTSC-HHHHHHHHHTTHHHHHHHHTTCSC-HHHHHHHHHHHHHHHTTCHHH
T ss_pred             CCHHHHHHHHccCCCHHHHHHHHHHHHHHhcCC-hhhhhHhhhccchhhhhhccccCC-HHHHHHHHHHHHHHhccchHH
Confidence            689999999975 56789999999999997654 556778999999999999999988 999999999999999988888


Q ss_pred             HHHHHhCCChhHHHHhhCCCC-----HHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHH
Q 014864          152 TKVVIDHGAVPIFVKLLYSPS-----DDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTL  226 (417)
Q Consensus       152 ~~~i~~~g~i~~L~~ll~~~~-----~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l  226 (417)
                      +..+.+.|+++.++.++..++     ......++|++.+++.............++++.+..++ .+.+++++..++|++
T Consensus       134 ~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~l~~ll-~~~~~~~~~~a~~~l  212 (434)
T d1q1sc_         134 RDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLL-HHNDPEVLADSCWAI  212 (434)
T ss_dssp             HHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHTCCCTTCCCHHHHHHHHHHHHHHT-TCSCHHHHHHHHHHH
T ss_pred             HHHHHHhhhhhHHHHHHHhcccccchHHHHHHHHHHHHHHhhcccccchhhhhhhHHHHHHHHH-hccccchhhhHHhhh
Confidence            999999999999999997643     45667889999999987665555555667788888888 788899999999999


Q ss_pred             hhhhcCCCCCC-hhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHH
Q 014864          227 SNFCRGKPQPP-FDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPA  305 (417)
Q Consensus       227 ~~l~~~~~~~~-~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a  305 (417)
                      .+++...+... .....+++|.++.++.+++++++..+++++.+++.+++.....+++.|+++.++.++.++++.++..|
T Consensus       213 ~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~a  292 (434)
T d1q1sc_         213 SYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEA  292 (434)
T ss_dssp             HHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHH
T ss_pred             cccchhhhhhHHHHhhcccchhcccccccchhhhhhchhhhhhhHHhhhhHHHHHHHhccccchHHHhhcccchhhhHHH
Confidence            99998753222 22346899999999999999999999999999999888888889999999999999999999999999


Q ss_pred             HHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhc-CCHHHHHHHHHCCCHHHHHHHhccCCH
Q 014864          306 LRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITA-GNREQIQAVIEANIIGPLVALLENAEF  384 (417)
Q Consensus       306 ~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~-~~~~~~~~l~~~~~i~~L~~~l~~~~~  384 (417)
                      +++|++++.........+.+.|+++.++.++.+. ++.++..|+|+++|++. ++++.+..+.+.|+++.|+++++.+++
T Consensus       293 ~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~~~-~~~v~~~a~~~l~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~d~  371 (434)
T d1q1sc_         293 TWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKA-DFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDT  371 (434)
T ss_dssp             HHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSS-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHHTTSSCH
T ss_pred             HHHHhhhccccchhHHHHhhhhhHHHHHHHHhcc-ChHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhcCCCH
Confidence            9999999999998888899999999999999998 99999999999999987 577888889999999999999999999


Q ss_pred             HHHHHHHHHHHHhhCC----CCHHHH-HHHHhcCcc
Q 014864          385 DIKKEAAWAISNATSG----GTHEQI-KYEHTFCTI  415 (417)
Q Consensus       385 ~v~~~a~~~L~nl~~~----~~~~~~-~~l~~~g~i  415 (417)
                      +++..++++|.++...    +..+.. ..+.+.||+
T Consensus       372 ~~~~~~l~~l~~ll~~~~~~~~~~~~~~~~~~~~~~  407 (434)
T d1q1sc_         372 KIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGL  407 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTSH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHcCCH
Confidence            9999999999998752    233433 444455553


No 5  
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=3.9e-29  Score=240.64  Aligned_cols=320  Identities=22%  Similarity=0.220  Sum_probs=276.1

Q ss_pred             cCHHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHH-HhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchh
Q 014864           73 ENLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVI-RSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEH  151 (417)
Q Consensus        73 ~~l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~-~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~  151 (417)
                      +.+|.|++.|+++|..++..|+..+.++...  +.....++ ..|+++.|+.+|.+.++++++..|+++|.+++.+ ++.
T Consensus        17 ~aip~L~~lL~~~~~~v~~~A~~~l~~l~~~--~~~~~~~~~~~~~v~~l~~~L~~~~~~~~~~~a~~~L~~l~~~-~~~   93 (529)
T d1jdha_          17 RAIPELTKLLNDEDQVVVNKAAVMVHQLSKK--EASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHH-REG   93 (529)
T ss_dssp             CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTS--HHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS-HHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc--cHHHHHHHHhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC-chh
Confidence            5789999999999999999999999999643  34444444 4578999999998765589999999999999874 788


Q ss_pred             HHHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhc
Q 014864          152 TKVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCR  231 (417)
Q Consensus       152 ~~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~  231 (417)
                      +..+++.|+++.|+.+|.++++.++..|+++|+|++.+.+..+..+.+.|+++.|+.++ +++++.++..+++++.+++.
T Consensus        94 ~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL-~~~~~~~~~~a~~~L~~l~~  172 (529)
T d1jdha_          94 LLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALL-NKTNVKFLAITTDCLQILAY  172 (529)
T ss_dssp             HHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGG-GCCCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHH-HccChHHHHHHHHHHHHHhh
Confidence            89999999999999999999999999999999999998888999999999999999999 77889999999999999998


Q ss_pred             CCCCC-ChhhhhchHHHHHHhhcCC-ChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHH
Q 014864          232 GKPQP-PFDQVSPALPALAHLIHSN-DDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTV  309 (417)
Q Consensus       232 ~~~~~-~~~~~~~~l~~L~~ll~~~-~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L  309 (417)
                      ..+.. ......++++.++.++.+. ++.++..+++++.+++...+ ....+++.|+++.|+.++.+++..++..+++++
T Consensus       173 ~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~~~~-~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~l  251 (529)
T d1jdha_         173 GNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSS-NKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTL  251 (529)
T ss_dssp             TCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTT-HHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHH
T ss_pred             hhhHHHHHHHhcccchHHHHHHHhhhhHHHHHHHHHHHhhhhcccc-ccchhhhhhhhhhHHHHhcccchhhhhhhhhHH
Confidence            75322 3334478899999999654 57889999999999987554 456789999999999999999999999999999


Q ss_pred             HHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhc--cCCHHHH
Q 014864          310 GNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLE--NAEFDIK  387 (417)
Q Consensus       310 ~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~--~~~~~v~  387 (417)
                      .++.......   ....|+++.|+.++.++ ++.++..|+++|+|++.++++....+.+.++++.|+..+.  .+.++++
T Consensus       252 ~~ls~~~~~~---~~~~~~i~~Lv~ll~~~-~~~~~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~Li~~l~~~~~~~~~~  327 (529)
T d1jdha_         252 RNLSDAATKQ---EGMEGLLGTLVQLLGSD-DINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDIT  327 (529)
T ss_dssp             HHHHTTCTTC---SCCHHHHHHHHHHTTCS-CHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHH
T ss_pred             Hhccccccch---hhhhhcchhhhhhcccc-cHHHHHHHHHHHHhhccchhHHHHHHHHhhhHHHHHHHHHhhhcchhHH
Confidence            9998554422   12247789999999998 9999999999999999988988888899999999999884  4567899


Q ss_pred             HHHHHHHHHhhCCC
Q 014864          388 KEAAWAISNATSGG  401 (417)
Q Consensus       388 ~~a~~~L~nl~~~~  401 (417)
                      ..|+++|.|++...
T Consensus       328 ~~a~~aL~~l~~~~  341 (529)
T d1jdha_         328 EPAICALRHLTSRH  341 (529)
T ss_dssp             HHHHHHHHHHTSSS
T ss_pred             HHHHHHhhcccchh
Confidence            99999999999765


No 6  
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=2e-28  Score=235.57  Aligned_cols=335  Identities=16%  Similarity=0.157  Sum_probs=285.7

Q ss_pred             cCHHHHHhhhcC-CChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchh
Q 014864           73 ENLPVMVAGVWS-NDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEH  151 (417)
Q Consensus        73 ~~l~~l~~~l~s-~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~  151 (417)
                      +.++.++..|.+ ++++.+..|+.+|.++...  ++....+++.|++|.|+.+|++++ ++++..|+++|.+++.+++..
T Consensus        59 ~~v~~l~~~L~~~~~~~~~~~a~~~L~~l~~~--~~~~~~i~~~g~i~~Li~lL~~~~-~~v~~~a~~aL~~l~~~~~~~  135 (529)
T d1jdha_          59 QMVSAIVRTMQNTNDVETARCTAGTLHNLSHH--REGLLAIFKSGGIPALVKMLGSPV-DSVLFYAITTLHNLLLHQEGA  135 (529)
T ss_dssp             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS--HHHHHHHHHTTHHHHHHHHTTCSC-HHHHHHHHHHHHHHHHHCTTH
T ss_pred             hHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC--chhHHHHHHCCCHHHHHHHhCCCC-HHHHHHHHHHHHHhhcccchh
Confidence            357888998865 7789999999999998542  566778999999999999999988 999999999999999988888


Q ss_pred             HHHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhc
Q 014864          152 TKVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCR  231 (417)
Q Consensus       152 ~~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~  231 (417)
                      +..+.+.|+++.|+.+|++++++++..++++|.+++..++..+..+...|++++++.++..+++..++..+++++.+++.
T Consensus       136 ~~~~~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~  215 (529)
T d1jdha_         136 KMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV  215 (529)
T ss_dssp             HHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT
T ss_pred             hhHHHhcCCchHHHHHHHccChHHHHHHHHHHHHHhhhhhHHHHHHHhcccchHHHHHHHhhhhHHHHHHHHHHHhhhhc
Confidence            88899999999999999999999999999999999998888899999999999999999777788899999999999998


Q ss_pred             CCCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHH
Q 014864          232 GKPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGN  311 (417)
Q Consensus       232 ~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~  311 (417)
                      ...........++++.|..++.+++..+...+++++.+++......   ....|+++.|+.++.++++.++..|+++|++
T Consensus       216 ~~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~l~~ls~~~~~~---~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~  292 (529)
T d1jdha_         216 CSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQ---EGMEGLLGTLVQLLGSDDINVVTCAAGILSN  292 (529)
T ss_dssp             STTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHTTCTTC---SCCHHHHHHHHHHTTCSCHHHHHHHHHHHHH
T ss_pred             cccccchhhhhhhhhhHHHHhcccchhhhhhhhhHHHhccccccch---hhhhhcchhhhhhcccccHHHHHHHHHHHHh
Confidence            7554444555789999999999999999999999999998654321   1224678999999999999999999999999


Q ss_pred             hhcCChHHHHHHHHcCChHHHHHhhcC-CCchhHHHHHHHHHHHHhcCCH---HHHHHHHHCCCHHHHHHHhccC-CHHH
Q 014864          312 IVTGDDMQTQCVIEYQALPCLLNLLSG-NYKKSIKKEACWTVSNITAGNR---EQIQAVIEANIIGPLVALLENA-EFDI  386 (417)
Q Consensus       312 l~~~~~~~~~~~~~~~~l~~L~~ll~~-~~~~~v~~~a~~~L~nl~~~~~---~~~~~l~~~~~i~~L~~~l~~~-~~~v  386 (417)
                      ++.+++.....+.+.++++.++..+.. ...+.++..++++|.|++...+   .....+...+.++.|+.++..+ +..+
T Consensus       293 l~~~~~~~~~~i~~~~~i~~Li~~l~~~~~~~~~~~~a~~aL~~l~~~~~~~~~~~~~i~~~~~l~~L~~ll~~~~~~~~  372 (529)
T d1jdha_         293 LTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPL  372 (529)
T ss_dssp             HTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHH
T ss_pred             hccchhHHHHHHHHhhhHHHHHHHHHhhhcchhHHHHHHHHhhcccchhhcchhhhhhHHhcccchhHHHHHhccchHHH
Confidence            999999888888899999999998853 2267899999999999997432   2344556789999999999865 4678


Q ss_pred             HHHHHHHHHHhhCCCCHHHHHHHHhcCcc
Q 014864          387 KKEAAWAISNATSGGTHEQIKYEHTFCTI  415 (417)
Q Consensus       387 ~~~a~~~L~nl~~~~~~~~~~~l~~~g~i  415 (417)
                      +..+++++.|++...  +....+.+.|++
T Consensus       373 ~~~~~~~l~~l~~~~--~~~~~l~~~g~i  399 (529)
T d1jdha_         373 IKATVGLIRNLALCP--ANHAPLREQGAI  399 (529)
T ss_dssp             HHHHHHHHHHHTTSG--GGHHHHHHTTHH
T ss_pred             HHHHHHHHhhcchhh--hhhhhhhhcccH
Confidence            899999999998853  445666666654


No 7  
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94  E-value=9.7e-25  Score=204.15  Aligned_cols=322  Identities=18%  Similarity=0.202  Sum_probs=248.0

Q ss_pred             CHHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHH
Q 014864           74 NLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTK  153 (417)
Q Consensus        74 ~l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~  153 (417)
                      .+|.+++.|+++++++|..|+.+|.+++..+ ++....+.+.|++|.|+++|++++ ++++..|+++|.+++.++++.+.
T Consensus         3 ~ip~lv~~L~~~~~~~~~~a~~~l~~l~~~~-~~~~~~i~~~g~i~~Lv~lL~~~~-~~v~~~a~~aL~~L~~~~~~~~~   80 (457)
T d1xm9a1           3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQD-ESAKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTNKL   80 (457)
T ss_dssp             CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSC-SSHHHHHHHTTHHHHHHHHTTSSC-HHHHHHHHHHHHHHHSSCHHHHH
T ss_pred             CHHHHHHHhCCCCHHHHHHHHHHHHHHHcCC-HHHHHHHHHCCcHHHHHHHHCCCC-HHHHHHHHHHHHHHHcCCHHHHH
Confidence            5899999999999999999999999997654 678888999999999999999988 99999999999999988899999


Q ss_pred             HHHhCCChhHHHHhhCC-CCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHh---------------cCCCchh
Q 014864          154 VVIDHGAVPIFVKLLYS-PSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQL---------------NGQPKLS  217 (417)
Q Consensus       154 ~i~~~g~i~~L~~ll~~-~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll---------------~~~~~~~  217 (417)
                      .+.+.|+++.|+.++.+ .++.++..++++|.+++..... +......| ++.++..+               ....+..
T Consensus        81 ~i~~~g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~~~~~-~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (457)
T d1xm9a1          81 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIADA-LPVLADRVIIPFSGWCDGNSNMSREVVDPE  158 (457)
T ss_dssp             HHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSST-HHHHHHHH-HHHHHHHTTHHHHTCC---------CCCHH
T ss_pred             HHHHCCChHHHHHHHhccCcHHHHHHHHHHHHHHHhhhhh-HHHHHhcc-cHHHHHHHHhhhhhhhcchhhhhcccccHH
Confidence            99999999999998865 7889999999999999987653 33333332 33333322               1233455


Q ss_pred             HHHHHHHHHhhhhcCCCCCCh-----------------------------------------------------------
Q 014864          218 MLRNATWTLSNFCRGKPQPPF-----------------------------------------------------------  238 (417)
Q Consensus       218 ~~~~a~~~l~~l~~~~~~~~~-----------------------------------------------------------  238 (417)
                      ++..+++++.+++........                                                           
T Consensus       159 v~~~a~~~l~~~~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  238 (457)
T d1xm9a1         159 VFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNAR  238 (457)
T ss_dssp             HHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC-
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHhccHHHHHHHHhcchhhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHhhhh
Confidence            666666665555432110000                                                           


Q ss_pred             ----------------------------------------hhhhchHHHHHHhhcC-CChHHHHHHHHHHHHhccCChH-
Q 014864          239 ----------------------------------------DQVSPALPALAHLIHS-NDDEVLTDACWALSYLSDGTND-  276 (417)
Q Consensus       239 ----------------------------------------~~~~~~l~~L~~ll~~-~~~~v~~~a~~~l~~l~~~~~~-  276 (417)
                                                              ....++++.++.++.. .++.+...+++++.+++..... 
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~  318 (457)
T d1xm9a1         239 NAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLM  318 (457)
T ss_dssp             ---------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSH
T ss_pred             hhhhHHHhhhhhhhhhHHHHHHHHhhhhHHhhhhhHHHHHHHhhcHHHHHHHHHhcccchHHHHHHHHHHHHHhhccccc
Confidence                                                    0011344555555533 3567778888889988765432 


Q ss_pred             ----HHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCC-----chhHHHH
Q 014864          277 ----KIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNY-----KKSIKKE  347 (417)
Q Consensus       277 ----~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~-----~~~v~~~  347 (417)
                          ....+.+.|+++.|+.++.++++.++..+++++++++..... .. .+..++++.++.+|....     +++++..
T Consensus       319 ~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~l~~La~~~~~-~~-~i~~~~i~~li~~L~~~~~~~~~~~~v~~~  396 (457)
T d1xm9a1         319 SSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLL-HR-VMGNQVFPEVTRLLTSHTGNTSNSEDILSS  396 (457)
T ss_dssp             HHHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTSGGG-HH-HHHHHTHHHHHHTTTSCCSCSTTHHHHHHH
T ss_pred             hHHHHHHHHHHcCChHHHHhhhcCccHHHHHHHHHHHHHHhhChhH-HH-HHHHhhHHHHHHHHhccccCcCCcHHHHHH
Confidence                223345678999999999999999999999999999876543 33 345578999999986431     4579999


Q ss_pred             HHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhccC-CHHHHHHHHHHHHHhhCCC
Q 014864          348 ACWTVSNITAGNREQIQAVIEANIIGPLVALLENA-EFDIKKEAAWAISNATSGG  401 (417)
Q Consensus       348 a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~~~-~~~v~~~a~~~L~nl~~~~  401 (417)
                      |+++|.|++.++++..+.+.+.|+++.|+.++.+. ++.+++.|+.+|+|++...
T Consensus       397 a~~~L~~l~~~~~~~~~~l~~~g~i~~L~~l~~~~~~~~~~~aA~~~L~~L~~~~  451 (457)
T d1xm9a1         397 ACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSK  451 (457)
T ss_dssp             HHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTSSST
T ss_pred             HHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHcCH
Confidence            99999999998898999999999999999999764 6899999999999997653


No 8  
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92  E-value=5.1e-24  Score=199.20  Aligned_cols=294  Identities=18%  Similarity=0.226  Sum_probs=226.1

Q ss_pred             CCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHH
Q 014864          116 GVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRD  195 (417)
Q Consensus       116 g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~  195 (417)
                      +.+|.|+++|++++ ++++..|+++|+++|.++++.+..+.+.|+||.|+++|.+++++++..|+++|+||+.+++..+.
T Consensus         2 ~~ip~lv~~L~~~~-~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~   80 (457)
T d1xm9a1           2 LTIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL   80 (457)
T ss_dssp             CCHHHHHHHHHSSC-THHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHH
T ss_pred             CCHHHHHHHhCCCC-HHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence            46899999999999 99999999999999999899999999999999999999999999999999999999999888999


Q ss_pred             HHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhh----------------cCCChHH
Q 014864          196 LVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGKPQPPFDQVSPALPALAHLI----------------HSNDDEV  259 (417)
Q Consensus       196 ~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~l~~L~~ll----------------~~~~~~v  259 (417)
                      .+.+.|+++.++.++....++.++..+++++.+++...... ......+++.+...+                ...+..+
T Consensus        81 ~i~~~g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v  159 (457)
T d1xm9a1          81 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELK-EELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEV  159 (457)
T ss_dssp             HHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTH-HHHHHHHHHHHHHHTTHHHHTCC---------CCCHHH
T ss_pred             HHHHCCChHHHHHHHhccCcHHHHHHHHHHHHHHHhhhhhH-HHHHhcccHHHHHHHHhhhhhhhcchhhhhcccccHHH
Confidence            99999999999999977788999999999999999875332 233334444444332                3346788


Q ss_pred             HHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCC-------------------------------------------
Q 014864          260 LTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMH-------------------------------------------  296 (417)
Q Consensus       260 ~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~-------------------------------------------  296 (417)
                      +..+++++.+++...+.....+...|+++.++.++.+                                           
T Consensus       160 ~~~a~~~l~~~~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  239 (457)
T d1xm9a1         160 FFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARN  239 (457)
T ss_dssp             HHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC--
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHhccHHHHHHHHhcchhhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHhhhhh
Confidence            9999999998886655444333334445544443321                                           


Q ss_pred             --------------------------------------------------------CChhhHHHHHHHHHHhhcCChH--
Q 014864          297 --------------------------------------------------------PSPSVLIPALRTVGNIVTGDDM--  318 (417)
Q Consensus       297 --------------------------------------------------------~~~~v~~~a~~~L~~l~~~~~~--  318 (417)
                                                                              .++.++..+.+++.+++.....  
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~  319 (457)
T d1xm9a1         240 AYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMS  319 (457)
T ss_dssp             --------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHH
T ss_pred             hhhHHHhhhhhhhhhHHHHHHHHhhhhHHhhhhhHHHHHHHhhcHHHHHHHHHhcccchHHHHHHHHHHHHHhhccccch
Confidence                                                                    1122345566666776654432  


Q ss_pred             ---HHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhccC------CHHHHHH
Q 014864          319 ---QTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENA------EFDIKKE  389 (417)
Q Consensus       319 ---~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~~~------~~~v~~~  389 (417)
                         ....+.+.++++.++.++.++ ++.++..++++++|++.. ++....+ ..++++.|+.+|...      +.+++..
T Consensus       320 ~~~~~~~~~~~~~l~~L~~~l~~~-~~~v~~~a~~~l~~La~~-~~~~~~i-~~~~i~~li~~L~~~~~~~~~~~~v~~~  396 (457)
T d1xm9a1         320 SGMSQLIGLKEKGLPQIARLLQSG-NSDVVRSGASLLSNMSRH-PLLHRVM-GNQVFPEVTRLLTSHTGNTSNSEDILSS  396 (457)
T ss_dssp             HHHHHHHHTTSCCHHHHHHHTTCS-CHHHHHHHHHHHHHHHTS-GGGHHHH-HHHTHHHHHHTTTSCCSCSTTHHHHHHH
T ss_pred             HHHHHHHHHHcCChHHHHhhhcCc-cHHHHHHHHHHHHHHhhC-hhHHHHH-HHhhHHHHHHHHhccccCcCCcHHHHHH
Confidence               223344679999999999998 999999999999999875 3333333 346899999998643      3579999


Q ss_pred             HHHHHHHhhCCCCHHHHHHHHhcCcc
Q 014864          390 AAWAISNATSGGTHEQIKYEHTFCTI  415 (417)
Q Consensus       390 a~~~L~nl~~~~~~~~~~~l~~~g~i  415 (417)
                      |+.+|.|++.. +++..+.+.+.||+
T Consensus       397 a~~~L~~l~~~-~~~~~~~l~~~g~i  421 (457)
T d1xm9a1         397 ACYTVRNLMAS-QPQLAKQYFSSSML  421 (457)
T ss_dssp             HHHHHHHHHTT-CTHHHHHHCCHHHH
T ss_pred             HHHHHHHHhcC-CHHHHHHHHHCCCH
Confidence            99999999976 55667777777664


No 9  
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86  E-value=1.8e-20  Score=162.69  Aligned_cols=194  Identities=14%  Similarity=0.139  Sum_probs=174.2

Q ss_pred             HHHHHHHHHHHHHHhCCCchhHHHHHhCCChhHHHH-hhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHH
Q 014864          131 PQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVK-LLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQ  209 (417)
Q Consensus       131 ~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~-ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~l  209 (417)
                      .+.+..|+.+|.+++.+ .++...+...|+++.++. ++++++++++..|+++|++++.+++.++..+.+.|+++.|+++
T Consensus        31 ~~~~~~Al~~L~~L~~~-~d~a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~l  109 (264)
T d1xqra1          31 QQEREGALELLADLCEN-MDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRL  109 (264)
T ss_dssp             HHHHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcC-HHHHHHHHHcCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHH
Confidence            67899999999999974 777888899999998886 7888999999999999999999999999999999999999999


Q ss_pred             hcCCCchhHHHHHHHHHhhhhcCCCCCC-hhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChH
Q 014864          210 LNGQPKLSMLRNATWTLSNFCRGKPQPP-FDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFP  288 (417)
Q Consensus       210 l~~~~~~~~~~~a~~~l~~l~~~~~~~~-~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~  288 (417)
                      +..+.++.++..+++++++++...+... .....++++.|++++.++++.++..++++|.+++..+++....+.+.|+++
T Consensus       110 L~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~  189 (264)
T d1xqra1         110 LDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQ  189 (264)
T ss_dssp             HHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHH
T ss_pred             hhcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhccHHHHHHHHHhhhHH
Confidence            9777889999999999999998874433 334588999999999999999999999999999988888888899999999


Q ss_pred             HHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHH
Q 014864          289 RLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIE  325 (417)
Q Consensus       289 ~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~  325 (417)
                      .|+.++.++++.++..|+++|++++..++........
T Consensus       190 ~L~~lL~~~~~~~~~~a~~aL~~L~~~~~~~~~~~~~  226 (264)
T d1xqra1         190 QLVALVRTEHSPFHEHVLGALCSLVTDFPQGVRECRE  226 (264)
T ss_dssp             HHHHHHTSCCSTHHHHHHHHHHHHHTTCHHHHHHHHC
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            9999999999999999999999999988877665543


No 10 
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83  E-value=1.3e-19  Score=157.15  Aligned_cols=197  Identities=12%  Similarity=0.113  Sum_probs=174.5

Q ss_pred             CCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCCCCCCh-hhhhchHHHH
Q 014864          170 SPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGKPQPPF-DQVSPALPAL  248 (417)
Q Consensus       170 ~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~~~~~~-~~~~~~l~~L  248 (417)
                      ..+.+.+..|+.+|.+++.+.+ ++..+...|++++++..+..+++++++..++++|++++.+.+.... ....+++|.|
T Consensus        28 ~~~~~~~~~Al~~L~~L~~~~d-~a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~L  106 (264)
T d1xqra1          28 AADQQEREGALELLADLCENMD-NAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKL  106 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSHH-HHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHcCHH-HHHHHHHcCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH
Confidence            3467889999999999996544 6677889999999998665889999999999999999987654333 3347899999


Q ss_pred             HHhhcC-CChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcC
Q 014864          249 AHLIHS-NDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQ  327 (417)
Q Consensus       249 ~~ll~~-~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~  327 (417)
                      +.++.+ .++.++..+++++++++.+.+.....+...|+++.|+.++.+++..++..++++|++++.+++.....+.+.|
T Consensus       107 v~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~  186 (264)
T d1xqra1         107 LRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMG  186 (264)
T ss_dssp             HHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTT
T ss_pred             HHHhhcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhccHHHHHHHHHhh
Confidence            999964 5788999999999999999988888899999999999999999999999999999999999998888899999


Q ss_pred             ChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHH
Q 014864          328 ALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIE  368 (417)
Q Consensus       328 ~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~  368 (417)
                      +++.|+.++.++ ++.++..|+++|++++..++.....+..
T Consensus       187 ~v~~L~~lL~~~-~~~~~~~a~~aL~~L~~~~~~~~~~~~~  226 (264)
T d1xqra1         187 MVQQLVALVRTE-HSPFHEHVLGALCSLVTDFPQGVRECRE  226 (264)
T ss_dssp             HHHHHHHHHTSC-CSTHHHHHHHHHHHHHTTCHHHHHHHHC
T ss_pred             hHHHHHHHHcCC-CHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            999999999998 9999999999999999988888776664


No 11 
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58  E-value=6.2e-14  Score=135.27  Aligned_cols=304  Identities=12%  Similarity=0.087  Sum_probs=223.6

Q ss_pred             HHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHH
Q 014864           75 LPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKV  154 (417)
Q Consensus        75 l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~  154 (417)
                      ++.+...+.++++.++..|+..+..++..-.........-..++|.+...+++.+ +.++..++.++..++..-.  ...
T Consensus       283 ~~~l~~ll~d~~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~~~d~~-~~vr~~~~~~l~~~~~~~~--~~~  359 (588)
T d1b3ua_         283 VPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDAN-QHVKSALASVIMGLSPILG--KDN  359 (588)
T ss_dssp             HHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHTCSC-HHHHHHHHTTGGGGHHHHC--HHH
T ss_pred             hHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHhhcCCC-hHHHHHHHHHHhhhhhccc--hhH
Confidence            5666777778888888888888887765432333333444667889999998888 8999999888877764211  111


Q ss_pred             HHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCCC
Q 014864          155 VIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGKP  234 (417)
Q Consensus       155 i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~~  234 (417)
                      .. ...+|.+..++.+++++++..++..++.+...-..  ..+ ....++.+...+ .+.++.++..++.++..++....
T Consensus       360 ~~-~~l~p~l~~~l~d~~~~v~~~~~~~l~~~~~~~~~--~~~-~~~ll~~l~~~~-~d~~~~~r~~~~~~l~~l~~~~~  434 (588)
T d1b3ua_         360 TI-EHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGI--RQL-SQSLLPAIVELA-EDAKWRVRLAIIEYMPLLAGQLG  434 (588)
T ss_dssp             HH-HHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCH--HHH-HHHHHHHHHHHH-TCSSHHHHHHHHHHHHHHHHHHC
T ss_pred             HH-HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhcch--hhh-hhHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHcC
Confidence            22 24689999999999999999999888877643211  111 122567777777 77889999999999998876421


Q ss_pred             CCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhhc
Q 014864          235 QPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVT  314 (417)
Q Consensus       235 ~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~  314 (417)
                        .........+.+..++.++...++..++++++.++......   .....+++.+..++.++++..|..++.+++.+..
T Consensus       435 --~~~~~~~l~~~l~~~l~D~~~~VR~~A~~~L~~l~~~~~~~---~~~~~i~~~l~~~~~~~~~~~R~~~~~~l~~l~~  509 (588)
T d1b3ua_         435 --VEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKE---WAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSE  509 (588)
T ss_dssp             --GGGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHH---HHHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHH
T ss_pred             --hHhHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHhCcH---HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence              11223456778888898889999999999999987532211   1223478999999999999999999999999875


Q ss_pred             CChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcC-CHHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHH
Q 014864          315 GDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAG-NREQIQAVIEANIIGPLVALLENAEFDIKKEAAWA  393 (417)
Q Consensus       315 ~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~-~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~  393 (417)
                      ..+.   ......++|.+..++.++ .+.||..++++|..+... .+..    ....+.|.|..+++++|.+||..|..+
T Consensus       510 ~~~~---~~~~~~ilp~ll~~~~D~-v~nVR~~a~~~l~~i~~~~~~~~----~~~~i~~~l~~L~~D~d~dVr~~A~~a  581 (588)
T d1b3ua_         510 VCGQ---DITTKHMLPTVLRMAGDP-VANVRFNVAKSLQKIGPILDNST----LQSEVKPILEKLTQDQDVDVKYFAQEA  581 (588)
T ss_dssp             HHHH---HHHHHHTHHHHHHGGGCS-CHHHHHHHHHHHHHHGGGSCHHH----HHHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred             HcCh---HHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHcCcHh----HHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence            4332   134456899999999998 999999999999999863 3322    223456777788889999999999999


Q ss_pred             HHHhhC
Q 014864          394 ISNATS  399 (417)
Q Consensus       394 L~nl~~  399 (417)
                      +..|+.
T Consensus       582 l~~l~~  587 (588)
T d1b3ua_         582 LTVLSL  587 (588)
T ss_dssp             HHHTTC
T ss_pred             HHHHhc
Confidence            988764


No 12 
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54  E-value=1.7e-13  Score=132.04  Aligned_cols=308  Identities=11%  Similarity=0.098  Sum_probs=224.2

Q ss_pred             HHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCC-chhHH
Q 014864           75 LPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGT-SEHTK  153 (417)
Q Consensus        75 l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~-~~~~~  153 (417)
                      ++.+...+.+.++.++..++..+.++....    ........+++.+..++++.+ ++++..|++.+..++..- .....
T Consensus       244 ~~~l~~~~~D~~~~Vr~~~~~~l~~l~~~~----~~~~~~~~l~~~l~~ll~d~~-~~vr~~a~~~l~~~~~~l~~~~~~  318 (588)
T d1b3ua_         244 MPTLRQAAEDKSWRVRYMVADKFTELQKAV----GPEITKTDLVPAFQNLMKDCE-AEVRAAASHKVKEFCENLSADCRE  318 (588)
T ss_dssp             HHHHHHHHTCSSHHHHHHHHHTHHHHHHHH----CHHHHHHTHHHHHHHHHTCSS-HHHHHHHHHHHHHHHHTSCTTTHH
T ss_pred             HHHHHHhcccccHHHHHHHHHhHHHHHHHh----hhhhhhhhhhHHHHHHHhccc-hHHHHHHHHHHHHHHHHHhhhhhh
Confidence            456666666777778888887777765322    112334567899999999888 899999999999887642 22222


Q ss_pred             HHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCC
Q 014864          154 VVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGK  233 (417)
Q Consensus       154 ~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~  233 (417)
                      ...-..+++.+...+.+.++.++..++.++..++..-.   ........++.+...+ .+++++++..++..+..+...-
T Consensus       319 ~~~~~~i~~~l~~~~~d~~~~vr~~~~~~l~~~~~~~~---~~~~~~~l~p~l~~~l-~d~~~~v~~~~~~~l~~~~~~~  394 (588)
T d1b3ua_         319 NVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILG---KDNTIEHLLPLFLAQL-KDECPEVRLNIISNLDCVNEVI  394 (588)
T ss_dssp             HHHHHTHHHHHHHHHTCSCHHHHHHHHTTGGGGHHHHC---HHHHHHHTHHHHHHHH-TCSCHHHHHHHHTTCHHHHHHS
T ss_pred             hhhHHHHHHHHHHhhcCCChHHHHHHHHHHhhhhhccc---hhHHHHHHHHHHHHHH-HhhhhhhhhHHHHHHHHHHhhc
Confidence            22233678889999999999999999988888763211   1112223678888888 7888999999988888777542


Q ss_pred             CCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhh
Q 014864          234 PQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIV  313 (417)
Q Consensus       234 ~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~  313 (417)
                      .  ........+|.+..++.+.++.++..++.++..++..-..   ..+...+.+.+..++.++...+|..|+.+++.++
T Consensus       395 ~--~~~~~~~ll~~l~~~~~d~~~~~r~~~~~~l~~l~~~~~~---~~~~~~l~~~l~~~l~D~~~~VR~~A~~~L~~l~  469 (588)
T d1b3ua_         395 G--IRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGV---EFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLV  469 (588)
T ss_dssp             C--HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCG---GGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHH
T ss_pred             c--hhhhhhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcCh---HhHHHHHHHHHHhhccCCchhHHHHHHHHHHHHH
Confidence            1  1233466788899999999999999999999887642110   0111235677888888999999999999999997


Q ss_pred             cCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHH
Q 014864          314 TGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWA  393 (417)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~  393 (417)
                      ......   .....+++.+..++.++ +..+|..++.+++.+....+.   ..+...++|.|+.+++++.+.||..++++
T Consensus       470 ~~~~~~---~~~~~i~~~l~~~~~~~-~~~~R~~~~~~l~~l~~~~~~---~~~~~~ilp~ll~~~~D~v~nVR~~a~~~  542 (588)
T d1b3ua_         470 EKFGKE---WAHATIIPKVLAMSGDP-NYLHRMTTLFCINVLSEVCGQ---DITTKHMLPTVLRMAGDPVANVRFNVAKS  542 (588)
T ss_dssp             HHHCHH---HHHHHTHHHHHHTTTCS-CHHHHHHHHHHHHHHHHHHHH---HHHHHHTHHHHHHGGGCSCHHHHHHHHHH
T ss_pred             HHhCcH---HHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHcCh---HHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence            533221   12335788999999888 999999999999998764332   22344689999999999999999999999


Q ss_pred             HHHhhCCCCH
Q 014864          394 ISNATSGGTH  403 (417)
Q Consensus       394 L~nl~~~~~~  403 (417)
                      |..+....+.
T Consensus       543 l~~i~~~~~~  552 (588)
T d1b3ua_         543 LQKIGPILDN  552 (588)
T ss_dssp             HHHHGGGSCH
T ss_pred             HHHHHHHcCc
Confidence            9999876554


No 13 
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45  E-value=1.4e-12  Score=125.05  Aligned_cols=300  Identities=16%  Similarity=0.133  Sum_probs=191.5

Q ss_pred             cCHHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhH
Q 014864           73 ENLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHT  152 (417)
Q Consensus        73 ~~l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~  152 (417)
                      -.++.+.+.+.++++.++..|++.+..+..   +...+.     +++.+.+.+.+++ +.+|..|+.++..+....++..
T Consensus        83 l~intl~kDl~d~n~~iR~lALr~L~~i~~---~~i~~~-----l~~~l~~~L~D~~-p~VRk~Aa~~l~kl~~~~p~~~  153 (579)
T d2vglb_          83 MAVNSFVKDCEDPNPLIRALAVRTMGCIRV---DKITEY-----LCEPLRKCLKDED-PYVRKTAAVCVAKLHDINAQMV  153 (579)
T ss_dssp             TTHHHHGGGSSSSSHHHHHHHHHHHHTCCS---GGGHHH-----HHHHHHHHSSCSC-HHHHHHHHHHHHHHHHSSCCCH
T ss_pred             HHHHHHHHHcCCCCHHHHHHHHHHHHcCCC---HHHHHH-----HHHHHHHHHhcCc-HHHHHHHHHHHHHHhccChhhh
Confidence            367888888888999999999888887632   222333     3788889999988 9999999999999988666543


Q ss_pred             HHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcC
Q 014864          153 KVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRG  232 (417)
Q Consensus       153 ~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~  232 (417)
                         ...+.++.|..++.++++.++..|+.+++.++...+.....-...+.+..++..+ .+.++..+..++.++..++..
T Consensus       154 ---~~~~~~~~L~~lL~D~n~~V~~~Al~~L~~I~~~~~~~~~~~l~~~~i~~Ll~~l-~~~~~~~q~~il~~L~~~~~~  229 (579)
T d2vglb_         154 ---EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTAL-NECTEWGQIFILDCLSNYNPK  229 (579)
T ss_dssp             ---HHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHTSCCC
T ss_pred             ---hhhhHHHHHHHHHcCCChHHHHHHHHHHHHHHHhCccchhHHhhHHHHHHHHhcc-CCCCHHHHHHHHHHHHHhCCC
Confidence               2346789999999999999999999999999865543110001112355667766 566777888888888766543


Q ss_pred             CCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCC---hHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHH
Q 014864          233 KPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGT---NDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTV  309 (417)
Q Consensus       233 ~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~---~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L  309 (417)
                          ........++.+...+.+.++.++..++.++..+....   ......+.+. +.+.++.++ +.+++++..|++.+
T Consensus       230 ----~~~~~~~li~~l~~~L~~~n~~V~~~a~~~i~~~~~~~~~~~~~~~~~~~~-l~~~l~~L~-s~~~ei~y~aL~~i  303 (579)
T d2vglb_         230 ----DDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKK-LAPPLVTLL-SGEPEVQYVALRNI  303 (579)
T ss_dssp             ----SHHHHHHHHHHHTTCSCSSTTHHHHHHHHHHHHSCCSCCBTTBSHHHHHHH-THHHHHHHT-TSCHHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH-hhHHHHHHh-cCCchHHHHHHHHH
Confidence                22334567788888888889999988888887764321   1112222222 344444444 34456666666666


Q ss_pred             HHhhcCCh-----------------HHH-HHHH-------H----cCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCH
Q 014864          310 GNIVTGDD-----------------MQT-QCVI-------E----YQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNR  360 (417)
Q Consensus       310 ~~l~~~~~-----------------~~~-~~~~-------~----~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~  360 (417)
                      ..++...+                 ... ...+       +    ..+++.|.+.+.+. +..+++.++.++++++...+
T Consensus       304 ~~l~~~~p~~l~~~~~~~~~~~~d~~~ik~~~L~iL~~l~~~~n~~~Il~eL~~y~~~~-d~~~~~~ai~aI~~la~~~~  382 (579)
T d2vglb_         304 NLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEV-DVDFVRKAVRAIGRCAIKVE  382 (579)
T ss_dssp             HHHHHHCCSTTTTCTTTTSCCTTSCHHHHHHHHHHHHHTCCSSTHHHHHHHHHHHTTSS-CHHHHHHHHHHHHHHHTTCH
T ss_pred             HHHHHhCHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHcChhhHHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHhCc
Confidence            66543211                 000 0000       0    12455566677777 88999999999999987655


Q ss_pred             HHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHHHHh
Q 014864          361 EQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNA  397 (417)
Q Consensus       361 ~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl  397 (417)
                      .....     +++.|++++.++...++.+++.++.++
T Consensus       383 ~~~~~-----~i~~Ll~ll~~~~~~v~~e~i~~i~~i  414 (579)
T d2vglb_         383 QSAER-----CVSTLLDLIQTKVNYVVQEAIVVIRDI  414 (579)
T ss_dssp             HHHHH-----HHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred             hHHHH-----HHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence            43221     233344444444444444444444443


No 14 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=99.45  E-value=2.3e-11  Score=104.89  Aligned_cols=253  Identities=15%  Similarity=0.100  Sum_probs=190.9

Q ss_pred             CHHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHH
Q 014864           74 NLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTK  153 (417)
Q Consensus        74 ~l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~  153 (417)
                      ..+.|++.|.++++.++..|+..|..+-    +        ...++.|+.++++++ +.++..|+++|+.+.........
T Consensus        20 ~~~~L~~~L~d~~~~vR~~A~~~L~~~~----~--------~~~~~~l~~~l~d~~-~~vr~~a~~aL~~l~~~~~~~~~   86 (276)
T d1oyza_          20 NDDELFRLLDDHNSLKRISSARVLQLRG----G--------QDAVRLAIEFCSDKN-YIRRDIGAFILGQIKICKKCEDN   86 (276)
T ss_dssp             CHHHHHHHTTCSSHHHHHHHHHHHHHHC----C--------HHHHHHHHHHHTCSS-HHHHHHHHHHHHHSCCCTTTHHH
T ss_pred             CHHHHHHHhcCCCHHHHHHHHHHHHhhC----C--------HhHHHHHHHHHcCCC-HHHHHHHHHHHHHhccccccccc
Confidence            4578999999999999999999998763    1        124899999999998 99999999999998764222111


Q ss_pred             HHHhCCChhHHH-HhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcC
Q 014864          154 VVIDHGAVPIFV-KLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRG  232 (417)
Q Consensus       154 ~i~~~g~i~~L~-~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~  232 (417)
                            .++.+. .+++++++.++..++.+|++++...+.....     .++.+...+ .+.++.++..++.++..... 
T Consensus        87 ------~~~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~~~-----~~~~l~~~~-~d~~~~vr~~a~~~l~~~~~-  153 (276)
T d1oyza_          87 ------VFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPK-----IVEQSQITA-FDKSTNVRRATAFAISVIND-  153 (276)
T ss_dssp             ------HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGGGHHH-----HHHHHHHHT-TCSCHHHHHHHHHHHHTC---
T ss_pred             ------hHHHHHHHHhcCCChhHHHHHHHHHHHHccccchhhHH-----HHHHHHHHh-cCcchHHHHHHHHHHhhcch-
Confidence                  123333 3567899999999999999998665533222     355666666 77788899989888876543 


Q ss_pred             CCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHh
Q 014864          233 KPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNI  312 (417)
Q Consensus       233 ~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l  312 (417)
                               ...++.+..++...+..+...+..++.........         ..+.++..+.+.+..++..+..+++.+
T Consensus       154 ---------~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~al~~~  215 (276)
T d1oyza_         154 ---------KATIPLLINLLKDPNGDVRNWAAFAININKYDNSD---------IRDCFVEMLQDKNEEVRIEAIIGLSYR  215 (276)
T ss_dssp             ----------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCCCHH---------HHHHHHHHTTCSCHHHHHHHHHHHHHT
T ss_pred             ---------HHHHHHHHHhcccccchhhhhHHHHHHhhhccccc---------cchhhhhhhhhhhhhhhhhhccccchh
Confidence                     24567888888888999998888888887665543         234567778888999999999998876


Q ss_pred             hcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhcc-CCHHHHHHHH
Q 014864          313 VTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLEN-AEFDIKKEAA  391 (417)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~~-~~~~v~~~a~  391 (417)
                      ..           ...++.|+..+.++   .+|..++++|+.+..           .+.++.|..++.+ ++.+++..|+
T Consensus       216 ~~-----------~~~~~~L~~~l~d~---~vr~~a~~aL~~ig~-----------~~~~~~L~~~l~~~~d~~vr~~A~  270 (276)
T d1oyza_         216 KD-----------KRVLSVLCDELKKN---TVYDDIIEAAGELGD-----------KTLLPVLDTMLYKFDDNEIITSAI  270 (276)
T ss_dssp             TC-----------GGGHHHHHHHHTSS---SCCHHHHHHHHHHCC-----------GGGHHHHHHHHTTSSCCHHHHHHH
T ss_pred             hh-----------hhhHHHHHHHhCCh---HHHHHHHHHHHHcCC-----------HHHHHHHHHHHccCCCHHHHHHHH
Confidence            42           24577888888754   689999999998842           2578888888875 4789999999


Q ss_pred             HHHH
Q 014864          392 WAIS  395 (417)
Q Consensus       392 ~~L~  395 (417)
                      .+|.
T Consensus       271 ~~L~  274 (276)
T d1oyza_         271 DKLK  274 (276)
T ss_dssp             HHHT
T ss_pred             HHHc
Confidence            8874


No 15 
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43  E-value=2.8e-12  Score=122.88  Aligned_cols=295  Identities=19%  Similarity=0.165  Sum_probs=208.3

Q ss_pred             cCHHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhH
Q 014864           73 ENLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHT  152 (417)
Q Consensus        73 ~~l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~  152 (417)
                      +.+.++-+.|.+++...+..|++.+....... .+.      +.+.+.+++++.+++ .+++.-+...+.+++..+++..
T Consensus        10 ~e~~eir~~L~s~~~~~r~~al~kli~~~~~G-~d~------s~l~~~vi~~~~s~d-~~~Kkl~yl~l~~~~~~~~d~~   81 (579)
T d2vglb_          10 GEIFELKAELNNEKKEKRKEAVKKVIAAMTVG-KDV------SSLFPDVVNCMQTDN-LELKKLVYLYLMNYAKSQPDMA   81 (579)
T ss_dssp             SHHHHHHHHTTSSCHHHHHHHHHHHHHHHHTT-CCC------GGGHHHHHHTTSSSC-HHHHHHHHHHHHHHHHHSHHHH
T ss_pred             hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHCC-CCc------hhHHHHHHHHhCCCC-HHHHHHHHHHHHHhCcCCccHH
Confidence            34678888999999988888876655443322 111      224788889999988 8999999999999987655432


Q ss_pred             HHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcC
Q 014864          153 KVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRG  232 (417)
Q Consensus       153 ~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~  232 (417)
                         .  -+++.|.+-+.++++.++..|+.+|+++...  ...+.     .++.+.+.+ .++++.+++.|+.++..+...
T Consensus        82 ---~--l~intl~kDl~d~n~~iR~lALr~L~~i~~~--~i~~~-----l~~~l~~~L-~D~~p~VRk~Aa~~l~kl~~~  148 (579)
T d2vglb_          82 ---I--MAVNSFVKDCEDPNPLIRALAVRTMGCIRVD--KITEY-----LCEPLRKCL-KDEDPYVRKTAAVCVAKLHDI  148 (579)
T ss_dssp             ---H--TTHHHHGGGSSSSSHHHHHHHHHHHHTCCSG--GGHHH-----HHHHHHHHS-SCSCHHHHHHHHHHHHHHHHS
T ss_pred             ---H--HHHHHHHHHcCCCCHHHHHHHHHHHHcCCCH--HHHHH-----HHHHHHHHH-hcCcHHHHHHHHHHHHHHhcc
Confidence               1  4688999999999999999999999998533  22222     467778888 788999999999999999987


Q ss_pred             CCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHh
Q 014864          233 KPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNI  312 (417)
Q Consensus       233 ~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l  312 (417)
                      .|.  .....+.++.+..++.++++.|+..++.++..++.......-.-+..+.+..++..+...++..+..++.+++.+
T Consensus       149 ~p~--~~~~~~~~~~L~~lL~D~n~~V~~~Al~~L~~I~~~~~~~~~~~l~~~~i~~Ll~~l~~~~~~~q~~il~~L~~~  226 (579)
T d2vglb_         149 NAQ--MVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNY  226 (579)
T ss_dssp             SCC--CHHHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHTS
T ss_pred             Chh--hhhhhhHHHHHHHHHcCCChHHHHHHHHHHHHHHHhCccchhHHhhHHHHHHHHhccCCCCHHHHHHHHHHHHHh
Confidence            543  333467889999999999999999999999999865432100001122466778888888888999999999988


Q ss_pred             hcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcC---CHHHHHHHHHCCCHHHHHHHhccCCHHHHHH
Q 014864          313 VTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAG---NREQIQAVIEANIIGPLVALLENAEFDIKKE  389 (417)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~---~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~  389 (417)
                      ....+.....     +++.+...+++. ++.++..++.++..+...   .++....+.+ .+.+.++.++ +++++++..
T Consensus       227 ~~~~~~~~~~-----li~~l~~~L~~~-n~~V~~~a~~~i~~~~~~~~~~~~~~~~~~~-~l~~~l~~L~-s~~~ei~y~  298 (579)
T d2vglb_         227 NPKDDREAQS-----ICERVTPRLSHA-NSAVVLSAVKVLMKFLELLPKDSDYYNMLLK-KLAPPLVTLL-SGEPEVQYV  298 (579)
T ss_dssp             CCCSHHHHHH-----HHHHHTTCSCSS-TTHHHHHHHHHHHHSCCSCCBTTBSHHHHHH-HTHHHHHHHT-TSCHHHHHH
T ss_pred             CCCCHHHHHH-----HHHHHHHHHcCc-hHHHHHHHHHHHHHHHhcCCcchHHHHHHHH-HhhHHHHHHh-cCCchHHHH
Confidence            8766655443     356677778888 888998888888776531   1111222222 2334444443 234555555


Q ss_pred             HHHHHHHhh
Q 014864          390 AAWAISNAT  398 (417)
Q Consensus       390 a~~~L~nl~  398 (417)
                      |+..+..++
T Consensus       299 aL~~i~~l~  307 (579)
T d2vglb_         299 ALRNINLIV  307 (579)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            555555554


No 16 
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39  E-value=5.8e-13  Score=134.69  Aligned_cols=303  Identities=15%  Similarity=0.175  Sum_probs=188.5

Q ss_pred             hHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHHHHhCCChhHHHH
Q 014864           87 SGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVK  166 (417)
Q Consensus        87 ~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~  166 (417)
                      +..+..|..++..+....+.+....     +++.+.+.+.+++ ...|..|+.+|+.++.+..+.....+. .+++.|+.
T Consensus       371 ~~~r~~a~~~L~~l~~~~~~~il~~-----~l~~l~~~l~s~~-~~~reaa~~alg~i~eg~~~~~~~~l~-~li~~l~~  443 (888)
T d1qbkb_         371 WNLRKCSAAALDVLANVYRDELLPH-----ILPLLKELLFHHE-WVVKESGILVLGAIAEGCMQGMIPYLP-ELIPHLIQ  443 (888)
T ss_dssp             CSSHHHHHHHSTTTTTTCCSSSHHH-----HHHHHHHTTTSSS-HHHHHHHHHHHHHHTTTSHHHHTTTHH-HHHHHHHH
T ss_pred             hhHHHHHHHHHhhHhhhhHHHHHHH-----HHHHHHHhhccch-hHHHHHHHHHhhhhhhhHHHHhcccch-hhhHHHHH
Confidence            3456666666666554332332222     3666777788877 799999999999999876544333332 46788999


Q ss_pred             hhCCCCHHHHHHHHHHHHHhhCCCc-hHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCCCCCChhhhhchH
Q 014864          167 LLYSPSDDVREQAVWALGNIAGDSP-RCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGKPQPPFDQVSPAL  245 (417)
Q Consensus       167 ll~~~~~~i~~~a~~~L~nl~~~~~-~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~l  245 (417)
                      .+.++++.++..++|+|+.++.... ...+. .-...++.++..+ .+.++.++..++++|.+++.............++
T Consensus       444 ~l~d~~~~Vr~~a~~~l~~~~~~~~~~~~~~-~~~~~l~~ll~~l-~d~~~~V~~~a~~al~~l~~~~~~~l~p~~~~il  521 (888)
T d1qbkb_         444 CLSDKKALVRSITCWTLSRYAHWVVSQPPDT-YLKPLMTELLKRI-LDSNKRVQEAACSAFATLEEEACTELVPYLAYIL  521 (888)
T ss_dssp             HTTSSCHHHHHHHHHHHHHTHHHHHSSCHHH-HTTTHHHHHHHHH-SSSCHHHHHHHHHHHHHHHHHHTTSSGGGHHHHH
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHhhhhhhhh-hhhhhHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence            9999999999999999999874211 11111 2234677888888 7778999999999999998654322222222333


Q ss_pred             HHHHHhhcCCChHHHH---------------------------------------------HHHHHHHHhcc----C---
Q 014864          246 PALAHLIHSNDDEVLT---------------------------------------------DACWALSYLSD----G---  273 (417)
Q Consensus       246 ~~L~~ll~~~~~~v~~---------------------------------------------~a~~~l~~l~~----~---  273 (417)
                      +.+...+...+.....                                             ..+.+++.++.    .   
T Consensus       522 ~~l~~~l~~~~~~~~~~~~~al~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~le~l~~i~~~~~~~~~~  601 (888)
T d1qbkb_         522 DTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLP  601 (888)
T ss_dssp             HHHHHHTTTCCHHHHHHHHHHHHHHHHHHGGGGCSHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHSTTTTHH
T ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhHHHHhh
Confidence            3333322221111111                                             11111111100    0   


Q ss_pred             ---------------------------------ChHHH-------------------HHHHHcCChHHHHhhcCCCChhh
Q 014864          274 ---------------------------------TNDKI-------------------QAVIEAGVFPRLAEFLMHPSPSV  301 (417)
Q Consensus       274 ---------------------------------~~~~~-------------------~~~~~~~~~~~L~~~l~~~~~~v  301 (417)
                                                       ..+..                   ..+....+++.+...+.+.++.+
T Consensus       602 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~l~~~l~~~l~~~~~~v  681 (888)
T d1qbkb_         602 YCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEV  681 (888)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCTTTSCCCCTHHHHHHHHHHHHHHHHHTTTTHHHHHTSCHHHHHHHHHTCSSHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHhCCCChHH
Confidence                                             00000                   00111123445556666777888


Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhcc
Q 014864          302 LIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLEN  381 (417)
Q Consensus       302 ~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~~  381 (417)
                      +..|+.++|.++..........+. .+++.+...++++ ...++..|+|++|.++...++.....+. .+++.|+.++++
T Consensus       682 r~~a~~llgdl~~~~~~~~~~~l~-~~~~~l~~~L~~~-~~~v~~~a~~~ig~ia~~~~~~~~py~~-~il~~L~~il~~  758 (888)
T d1qbkb_         682 RQSSFALLGDLTKACFQHVKPCIA-DFMPILGTNLNPE-FISVCNNATWAIGEISIQMGIEMQPYIP-MVLHQLVEIINR  758 (888)
T ss_dssp             HHHHHHHHHHHHHHCGGGTGGGHH-HHHHHHHHTCCGG-GHHHHHHHHHHHHHHHHHTGGGGGGGSH-HHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHH-HHHHHHHHHhCcC-CHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHHHHHHHcC
Confidence            888888888888655543322222 3677788888877 8899999999999998643333333232 478889999986


Q ss_pred             CC--HHHHHHHHHHHHHhhCCC
Q 014864          382 AE--FDIKKEAAWAISNATSGG  401 (417)
Q Consensus       382 ~~--~~v~~~a~~~L~nl~~~~  401 (417)
                      ++  ..++.+++.+|+.++...
T Consensus       759 ~~~~~~v~~n~~~~lgrl~~~~  780 (888)
T d1qbkb_         759 PNTPKTLLENTAITIGRLGYVC  780 (888)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHC
T ss_pred             CCccHHHHHHHHHHHHHHHHHC
Confidence            53  568999999999987753


No 17 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=99.33  E-value=2.9e-10  Score=97.79  Aligned_cols=230  Identities=14%  Similarity=0.108  Sum_probs=178.0

Q ss_pred             hCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHH
Q 014864          115 SGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCR  194 (417)
Q Consensus       115 ~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~  194 (417)
                      ....+.|+++|++++ +.++..|+.+|+.+..  +         .+++.|+.+++++++.++..|+++|+.+...... .
T Consensus        18 ~~~~~~L~~~L~d~~-~~vR~~A~~~L~~~~~--~---------~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~-~   84 (276)
T d1oyza_          18 KLNDDELFRLLDDHN-SLKRISSARVLQLRGG--Q---------DAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKC-E   84 (276)
T ss_dssp             TSCHHHHHHHTTCSS-HHHHHHHHHHHHHHCC--H---------HHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTT-H
T ss_pred             cCCHHHHHHHhcCCC-HHHHHHHHHHHHhhCC--H---------hHHHHHHHHHcCCCHHHHHHHHHHHHHhcccccc-c
Confidence            345778999999988 9999999999998753  1         4689999999999999999999999998654332 1


Q ss_pred             HHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCC
Q 014864          195 DLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGKPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGT  274 (417)
Q Consensus       195 ~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~  274 (417)
                      +.     .++.+...+..++++.++..++.+|..++...+    ......++.+...+.++++.++..++.+++....  
T Consensus        85 ~~-----~~~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~----~~~~~~~~~l~~~~~d~~~~vr~~a~~~l~~~~~--  153 (276)
T d1oyza_          85 DN-----VFNILNNMALNDKSACVRATAIESTAQRCKKNP----IYSPKIVEQSQITAFDKSTNVRRATAFAISVIND--  153 (276)
T ss_dssp             HH-----HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCG----GGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC----
T ss_pred             cc-----hHHHHHHHHhcCCChhHHHHHHHHHHHHccccc----hhhHHHHHHHHHHhcCcchHHHHHHHHHHhhcch--
Confidence            22     244566666578899999999999999987532    2234567788888888899999888888876532  


Q ss_pred             hHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHH
Q 014864          275 NDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSN  354 (417)
Q Consensus       275 ~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~n  354 (417)
                               ...++.+..++...++.++..+..+++.+.......         .+.+...+.+. +..++..+.++++.
T Consensus       154 ---------~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~al~~  214 (276)
T d1oyza_         154 ---------KATIPLLINLLKDPNGDVRNWAAFAININKYDNSDI---------RDCFVEMLQDK-NEEVRIEAIIGLSY  214 (276)
T ss_dssp             ----------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCCCHHH---------HHHHHHHTTCS-CHHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHhcccccchhhhhHHHHHHhhhcccccc---------chhhhhhhhhh-hhhhhhhhccccch
Confidence                     246778888899999999999998888887665532         34567777777 89999999999987


Q ss_pred             HhcCCHHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHHHHhhCC
Q 014864          355 ITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSG  400 (417)
Q Consensus       355 l~~~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl~~~  400 (417)
                      +..           ...++.|++.+.+  +.+|..|+++|+.+...
T Consensus       215 ~~~-----------~~~~~~L~~~l~d--~~vr~~a~~aL~~ig~~  247 (276)
T d1oyza_         215 RKD-----------KRVLSVLCDELKK--NTVYDDIIEAAGELGDK  247 (276)
T ss_dssp             TTC-----------GGGHHHHHHHHTS--SSCCHHHHHHHHHHCCG
T ss_pred             hhh-----------hhhHHHHHHHhCC--hHHHHHHHHHHHHcCCH
Confidence            632           2467888888875  45899999999998543


No 18 
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31  E-value=1.6e-10  Score=120.28  Aligned_cols=316  Identities=13%  Similarity=0.132  Sum_probs=214.3

Q ss_pred             HHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHH
Q 014864           75 LPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKV  154 (417)
Q Consensus        75 l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~  154 (417)
                      +..+++.+.+.|++.|+.|+..|.+.+..+. ...+.-....+++.|+.+|++++ +++|..|+.+|+.++..-++..  
T Consensus         5 ~~~ll~k~~~~D~d~R~ma~~dl~~~l~~~~-~~~~~~~~~~i~~~ll~~L~D~~-~~Vq~~A~k~l~~l~~~~~~~~--   80 (1207)
T d1u6gc_           5 ISNLLEKMTSSDKDFRFMATNDLMTELQKDS-IKLDDDSERKVVKMILKLLEDKN-GEVQNLAVKCLGPLVSKVKEYQ--   80 (1207)
T ss_dssp             HHHHHHHTTCSSHHHHHHHHHHHHHHTSSSC-CSCCTTHHHHHHHHHHHHTTCSS-HHHHHHHHHHHHHHHTTSCHHH--
T ss_pred             HHHHHHhcCCCCHhHHHHHHHHHHHHHhhcc-cccChHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHhCcHhh--
Confidence            5788999999999999999999998876531 11111122346899999999888 9999999999999988644321  


Q ss_pred             HHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCch------HHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhh
Q 014864          155 VIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPR------CRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSN  228 (417)
Q Consensus       155 i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~------~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~  228 (417)
                       +. ..++.|+..+.+++...+..+..+|..+...-+.      .... .....++.+...+....+..++..++.++..
T Consensus        81 -~~-~l~~~L~~~l~~~~~~~r~~~~~~L~~i~~~l~~~~~~~~~~~~-~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~  157 (1207)
T d1u6gc_          81 -VE-TIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAAN-VCKKITGRLTSAIAKQEDVSVQLEALDIMAD  157 (1207)
T ss_dssp             -HH-HHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHH-HHHHHHHHHHHHHSCCSCHHHHHHHHHHHHH
T ss_pred             -HH-HHHHHHHHHhcCCchhhhHHHHHHHHHHHHhcccccccchhHHH-HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH
Confidence             11 4678888888888888888888888776532211      1111 1112445556666566788899999999999


Q ss_pred             hhcCCCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHH-----HHHHHH--------------------
Q 014864          229 FCRGKPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDK-----IQAVIE--------------------  283 (417)
Q Consensus       229 l~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~-----~~~~~~--------------------  283 (417)
                      +....+.........+++.+...+.+++..++..++.+++.++......     ...+++                    
T Consensus       158 l~~~~g~~l~~~~~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~l~~  237 (1207)
T d1u6gc_         158 MLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAA  237 (1207)
T ss_dssp             HHHHTCSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----CTTHHHHHHHHHHHTCSSCSCTTHHHHHHH
T ss_pred             HHHHhhHhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHH
Confidence            8876554444445678888999999999999999999999887543211     111111                    


Q ss_pred             -------------cCChHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHH----HHHHHc--------------------
Q 014864          284 -------------AGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQT----QCVIEY--------------------  326 (417)
Q Consensus       284 -------------~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~----~~~~~~--------------------  326 (417)
                                   ..+++.++..+.+.++.++..++.++..++...+...    ..++..                    
T Consensus       238 l~~~~~~~~~~~l~~i~~~l~~~l~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~ii~~~l~~l~~dp~~~~~~~~~~~  317 (1207)
T d1u6gc_         238 ISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDE  317 (1207)
T ss_dssp             HHHHSSGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTTCCCCC------------
T ss_pred             HHHHcchhhHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhChhhhhhhHHHHHHHHHHHHhcCcchhhhhHHHHH
Confidence                         1345566666777788889888888888875543211    111100                    


Q ss_pred             ------------CChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHH
Q 014864          327 ------------QALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAI  394 (417)
Q Consensus       327 ------------~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L  394 (417)
                                  ...+.......+. .+.+|..++.+|..++...++.....++ .+++.|+..+.+.+..+|..+..++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~d~-s~~vR~~a~~~L~~l~~~~~~~l~~~~~-~~~~~L~~~l~d~~~~vr~~~~~~l  395 (1207)
T d1u6gc_         318 NAMDADGGDDDDQGSDDEYSDDDDM-SWKVRRAAAKCLDAVVSTRHEMLPEFYK-TVSPALISRFKEREENVKADVFHAY  395 (1207)
T ss_dssp             ------------------------C-TTHHHHHHHHHHHHHHTTCCTTHHHHHT-TTHHHHHSTTSCSSSHHHHHHHHHH
T ss_pred             hhhhhhccchhhhhHHHHHhhhhhh-hHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHHHhcCCchHHHHHHHHHH
Confidence                        0000111112223 5789999999999998866655544443 6899999999999999999999998


Q ss_pred             HHhhC
Q 014864          395 SNATS  399 (417)
Q Consensus       395 ~nl~~  399 (417)
                      ..+..
T Consensus       396 ~~l~~  400 (1207)
T d1u6gc_         396 LSLLK  400 (1207)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87753


No 19 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.30  E-value=1.1e-09  Score=104.63  Aligned_cols=294  Identities=17%  Similarity=0.187  Sum_probs=196.1

Q ss_pred             cCHHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhH
Q 014864           73 ENLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHT  152 (417)
Q Consensus        73 ~~l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~  152 (417)
                      .+...+++.+.+++...+..+--.+..++..  ++..-.+    ++..+.+-|++++ +.++..|+++|+++..  ++..
T Consensus        66 ~~~~~vi~l~ss~~~~~Kr~gYL~l~~~~~~--~~el~~L----~iNtl~KDL~s~n-~~ir~lALr~L~~i~~--~~i~  136 (584)
T d2vgla_          66 FGHMEAVNLLSSNRYTEKQIGYLFISVLVNS--NSELIRL----INNAIKNDLASRN-PTFMGLALHCIANVGS--REMA  136 (584)
T ss_dssp             SCHHHHHHGGGCSCHHHHHHHHHHHHHSCCC--CHHHHHH----HHHHHHHHHHSCC-HHHHHHHHHHHHHHCC--HHHH
T ss_pred             chHHHHHHHhCCCCHHHHHHHHHHHHHHcCC--CchHHHH----HHHHHHHHcCCCC-HHHHHHHHHHHHcCCC--HHHH
Confidence            4678999999999999999888777776532  2322222    3677888888888 9999999999999975  5554


Q ss_pred             HHHHhCCChhHHHHhh--CCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhh
Q 014864          153 KVVIDHGAVPIFVKLL--YSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFC  230 (417)
Q Consensus       153 ~~i~~~g~i~~L~~ll--~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~  230 (417)
                      ..+     .+.+.+++  .++++.++..|++++..+....|..   ....+.++.+..++ .+.++.+...+++++..++
T Consensus       137 ~~l-----~~~V~k~l~~~d~~p~VRk~A~l~l~ki~~~~pd~---~~~~~~~~~L~~lL-~D~d~~V~~aAl~ll~eI~  207 (584)
T d2vgla_         137 EAF-----AGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLL-NDQHLGVVTAATSLITTLA  207 (584)
T ss_dssp             HHH-----TTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGG---CCCCSCHHHHHHHT-TCSCHHHHHHHHHHHHHHH
T ss_pred             HHH-----HHHHHHhhccCCCcHHHHHHHHHHHHHHHHhChhh---hhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHH
Confidence            433     44455544  3577899999999999998665542   23445788899999 7889999999999999988


Q ss_pred             cCCCCCChhhhhchHHHH----------------------------HHhhc----CCChHHHHHH---------------
Q 014864          231 RGKPQPPFDQVSPALPAL----------------------------AHLIH----SNDDEVLTDA---------------  263 (417)
Q Consensus       231 ~~~~~~~~~~~~~~l~~L----------------------------~~ll~----~~~~~v~~~a---------------  263 (417)
                      ...|..........++.+                            +.++.    .+++.+....               
T Consensus       208 ~~~p~~~~~~~~~~i~~L~~ll~~~~~~~~~~~~~~~~~~~lq~~il~ll~~l~~~~~~~~~~~l~~~l~~Il~~~~~~~  287 (584)
T d2vgla_         208 QKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPP  287 (584)
T ss_dssp             HHCHHHHTTHHHHHHHHHHHHHHCCSSSCSTTEETTEESHHHHHHHHHHGGGSSSCSSHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             HhCHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhhcccHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHhhhcc
Confidence            654221111111111111                            12111    1122221111               


Q ss_pred             ------------------HHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHH
Q 014864          264 ------------------CWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIE  325 (417)
Q Consensus       264 ------------------~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~  325 (417)
                                        +.++..+.. .+.    .. ..+++.+..+|.+.++.++..++..+..++...... . ++.
T Consensus       288 ~~~~~~~~~~~~aVl~e~i~~i~~~~~-~~~----~~-~~~i~~l~~lL~s~~~niry~aL~~L~~L~~~~~~~-~-~~~  359 (584)
T d2vgla_         288 KSKKVQHSNAKNAVLFEAISLIIHHDS-EPN----LL-VRACNQLGQFLQHRETNLRYLALESMCTLASSEFSH-E-AVK  359 (584)
T ss_dssp             SCSSHHHHHHHHHHHHHHHHHHHHHCC-CHH----HH-HHHHHHHHHHSSCSCHHHHHHHHHHHHHHTTCTTTH-H-HHH
T ss_pred             ccccHHhhhhHHHHHHHHHHHHHhcCC-CHH----HH-HHHHHHHHHHhcCCCcchHHHHHHHHHHHHccCCCH-H-HHH
Confidence                              111111111 100    00 125677888899999999999999999998754321 1 222


Q ss_pred             cCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHHHHhhCC
Q 014864          326 YQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSG  400 (417)
Q Consensus       326 ~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl~~~  400 (417)
                       .....++..+....+..++..++.+|.+++.  ++++..     +++.|...+.+.+.+++.+++.+++.++..
T Consensus       360 -~~~~~il~~l~~~~~~~Ir~~aL~lL~~L~n--~~Ni~~-----Iv~eL~~yl~~~d~~~k~~~i~~I~~la~k  426 (584)
T d2vgla_         360 -THIETVINALKTERDVSVRQRAVDLLYAMCD--RSNAQQ-----IVAEMLSYLETADYSIREEIVLKVAILAEK  426 (584)
T ss_dssp             -TTHHHHHHHHTTCCCHHHHHHHHHHHHHHCC--HHHHHH-----HHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHhcccCchhHHHHHHHHHHHHhCC--HHHHHH-----HHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence             2345556556544378999999999999974  455543     567888889999999999999999999864


No 20 
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29  E-value=1.1e-11  Score=125.22  Aligned_cols=318  Identities=16%  Similarity=0.172  Sum_probs=196.5

Q ss_pred             HHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCc-hhHHH
Q 014864           76 PVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTS-EHTKV  154 (417)
Q Consensus        76 ~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~-~~~~~  154 (417)
                      +.+.+.+.++++..+..|+.++..++.+. .+.....+ ..+++.++..+++++ +.+|..|+|+|+.++.... .....
T Consensus       398 ~~l~~~l~s~~~~~reaa~~alg~i~eg~-~~~~~~~l-~~li~~l~~~l~d~~-~~Vr~~a~~~l~~~~~~~~~~~~~~  474 (888)
T d1qbkb_         398 PLLKELLFHHEWVVKESGILVLGAIAEGC-MQGMIPYL-PELIPHLIQCLSDKK-ALVRSITCWTLSRYAHWVVSQPPDT  474 (888)
T ss_dssp             HHHHHTTTSSSHHHHHHHHHHHHHHTTTS-HHHHTTTH-HHHHHHHHHHTTSSC-HHHHHHHHHHHHHTHHHHHSSCHHH
T ss_pred             HHHHHhhccchhHHHHHHHHHhhhhhhhH-HHHhcccc-hhhhHHHHHhccCCC-HHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            44445667889999999999998876432 11111111 235788999999888 9999999999999876211 11222


Q ss_pred             HHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCC-----chHHH----------------H---------HHhc----
Q 014864          155 VIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDS-----PRCRD----------------L---------VLSQ----  200 (417)
Q Consensus       155 i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~-----~~~~~----------------~---------~~~~----  200 (417)
                      .. ...++.++..+.++++.++..|+++|.+++...     +....                .         +.+.    
T Consensus       475 ~~-~~~l~~ll~~l~d~~~~V~~~a~~al~~l~~~~~~~l~p~~~~il~~l~~~l~~~~~~~~~~~~~al~~l~~~~~~~  553 (888)
T d1qbkb_         475 YL-KPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHH  553 (888)
T ss_dssp             HT-TTHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTTSSGGGHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHGGG
T ss_pred             hh-hhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhcc
Confidence            22 367888999999999999999999999987321     10000                0         0000    


Q ss_pred             ----C----CHHHHHHHhcC--CCc-------------------------------------------------------
Q 014864          201 ----G----GLVPLLAQLNG--QPK-------------------------------------------------------  215 (417)
Q Consensus       201 ----g----~i~~L~~ll~~--~~~-------------------------------------------------------  215 (417)
                          .    .++.+......  ..+                                                       
T Consensus       554 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~le~l~~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~  633 (888)
T d1qbkb_         554 LNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEA  633 (888)
T ss_dssp             GCSHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSCC
T ss_pred             ccchHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence                0    01111111100  001                                                       


Q ss_pred             --hhHHHHHHHHHhhhhcCCCCCChhh--hhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHH
Q 014864          216 --LSMLRNATWTLSNFCRGKPQPPFDQ--VSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLA  291 (417)
Q Consensus       216 --~~~~~~a~~~l~~l~~~~~~~~~~~--~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~  291 (417)
                        .++...++.++..+...-.......  ....++.+...+.+.+++++..+..+++.++...........+. +++.+.
T Consensus       634 ~~~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~l~~~l~~~l~~~~~~vr~~a~~llgdl~~~~~~~~~~~l~~-~~~~l~  712 (888)
T d1qbkb_         634 PDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIAD-FMPILG  712 (888)
T ss_dssp             CCTHHHHHHHHHHHHHHHHHTTTTHHHHHTSCHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTGGGHHH-HHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHhCCCChHHHHHHHHHHHHHHHhhhHHHHHHHHH-HHHHHH
Confidence              0111111111111111100000000  12345666777778889999999999988876544333222222 677788


Q ss_pred             hhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCC-chhHHHHHHHHHHHHhcCCHHHHHHHHHCC
Q 014864          292 EFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNY-KKSIKKEACWTVSNITAGNREQIQAVIEAN  370 (417)
Q Consensus       292 ~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~-~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~  370 (417)
                      ..+.++.+.++..|++++|.++..........+ ..+++.|+.+++++. +..++.+++.+||.++..+|+.....+. .
T Consensus       713 ~~L~~~~~~v~~~a~~~ig~ia~~~~~~~~py~-~~il~~L~~il~~~~~~~~v~~n~~~~lgrl~~~~p~~~~~~l~-~  790 (888)
T d1qbkb_         713 TNLNPEFISVCNNATWAIGEISIQMGIEMQPYI-PMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQ-Q  790 (888)
T ss_dssp             HTCCGGGHHHHHHHHHHHHHHHHHTGGGGGGGS-HHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHCHHHHGGGGG-G
T ss_pred             HHhCcCCHHHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHCHHHHHhhHH-H
Confidence            888888889999999999999865543322211 256788999998752 3468999999999999877876543333 4


Q ss_pred             CHHHHHHHhcc-CCHHHHHHHHHHHHHhhCC
Q 014864          371 IIGPLVALLEN-AEFDIKKEAAWAISNATSG  400 (417)
Q Consensus       371 ~i~~L~~~l~~-~~~~v~~~a~~~L~nl~~~  400 (417)
                      +++.++..|.. .+.+-+..|...++.+...
T Consensus       791 ~~~~~~~~l~~~~d~~ek~~~~~g~~~~i~~  821 (888)
T d1qbkb_         791 FIRPWCTSLRNIRDNEEKDSAFRGICTMISV  821 (888)
T ss_dssp             THHHHHHHHTTSCCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCcHHHHHHHHHHHHHHHH
Confidence            77888888865 4556688888888888764


No 21 
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19  E-value=1.4e-10  Score=107.15  Aligned_cols=277  Identities=14%  Similarity=0.100  Sum_probs=180.4

Q ss_pred             CCHHHHHHhhcCCC-CHHHHHHHHHHHHHHhCCCchhHHHHHhCCChhHHHHhhCC--CCHHHHHHHHHHHHHhhCCCch
Q 014864          116 GVVPRFVEFLLRED-YPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLYS--PSDDVREQAVWALGNIAGDSPR  192 (417)
Q Consensus       116 g~i~~Lv~lL~~~~-~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~--~~~~i~~~a~~~L~nl~~~~~~  192 (417)
                      ++++.+++.+.++. +...+..++.++..++.........-.....++.++..+.+  .+..++..++.+++++......
T Consensus       127 ~~~~~l~~~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~  206 (458)
T d1ibrb_         127 ELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA  206 (458)
T ss_dssp             THHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHH
T ss_pred             chhHHHHHHHHhhcchHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHhhhh
Confidence            45888888876543 35677788888888875322221111112456777777765  5688999999999999865432


Q ss_pred             HHH-HHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCCCCCChhhhhc-hHHHHHHhhcCCChHHHHHHHHHHHHh
Q 014864          193 CRD-LVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGKPQPPFDQVSP-ALPALAHLIHSNDDEVLTDACWALSYL  270 (417)
Q Consensus       193 ~~~-~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~-~l~~L~~ll~~~~~~v~~~a~~~l~~l  270 (417)
                      ... ........+.+...+ .+++++++..++.++..++...+..-...+.. ..+.+...+.+.+++++..++..+..+
T Consensus       207 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i  285 (458)
T d1ibrb_         207 NFDKESERHFIMQVVCEAT-QCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNV  285 (458)
T ss_dssp             HHTSHHHHHHHHHHHHHHT-TCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHhHhhHHHHh-cCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence            211 111112344455555 77899999999999999987654332222323 344556667778888988888888777


Q ss_pred             ccCChHHH---------------------HHHHHcCChHHHHhhcCC-------CChhhHHHHHHHHHHhhcCChHHHHH
Q 014864          271 SDGTNDKI---------------------QAVIEAGVFPRLAEFLMH-------PSPSVLIPALRTVGNIVTGDDMQTQC  322 (417)
Q Consensus       271 ~~~~~~~~---------------------~~~~~~~~~~~L~~~l~~-------~~~~v~~~a~~~L~~l~~~~~~~~~~  322 (417)
                      +.......                     .... ..+++.+...+.+       .++.++..+..++..++.......- 
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~-  363 (458)
T d1ibrb_         286 CDEEMDLAIEASEAAEQGRPPEHTSKFYAKGAL-QYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIV-  363 (458)
T ss_dssp             HHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHH-HHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTTHH-
T ss_pred             HHHHHHHHHhhhhHHHhhhHHHHHHHHHHHHHH-HHHhhhHHhhhhcchhhhccccccHHHHHHHHHHHHHHhccHhhh-
Confidence            53221110                     0011 1233444444432       2346788888888888754433221 


Q ss_pred             HHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCC-HHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHHHHhhCC
Q 014864          323 VIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGN-REQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSG  400 (417)
Q Consensus       323 ~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~-~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl~~~  400 (417)
                         ..+++.+...++++ ++.+|..|+.+|+.++.+. ++.....+ ..+++.++..+.++++.||..|+|+|+.++..
T Consensus       364 ---~~l~~~i~~~l~s~-~~~~r~aal~~l~~i~~~~~~~~~~~~l-~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~  437 (458)
T d1ibrb_         364 ---PHVLPFIKEHIKNP-DWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELMKDPSVVVRDTAAWTVGRICEL  437 (458)
T ss_dssp             ---HHHHHHHHHHTTCS-SHHHHHHHHHHHHHTSSSSCTTTTCTTT-TTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred             ---hHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHhcCHhHHHHHH-HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence               13567788888888 9999999999999998753 22222222 36889999999999999999999999998754


No 22 
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15  E-value=2.2e-10  Score=105.81  Aligned_cols=296  Identities=18%  Similarity=0.201  Sum_probs=184.6

Q ss_pred             CHHHHHhhhcC--CChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCC-CHHHHHHHHHHHHHHhCCCch
Q 014864           74 NLPVMVAGVWS--NDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLRED-YPQLQFEAAWALTNIASGTSE  150 (417)
Q Consensus        74 ~l~~l~~~l~s--~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~-~~~~~~~a~~~L~~l~~~~~~  150 (417)
                      .++.+++.+.+  .++..+..++..+..+.... .+.........+++.++..+.+.+ ...++..|+.++..+......
T Consensus       128 ~~~~l~~~l~~~~~~~~~~~~~l~~l~~~~~~~-~~~~~~~~~~~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~  206 (458)
T d1ibrb_         128 LIPQLVANVTNPNSTEHMKESTLEAIGYICQDI-DPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA  206 (458)
T ss_dssp             HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHS-CGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHH
T ss_pred             hhHHHHHHHHhhcchHHHHHHHHHHHHHHHhhc-cchhhhhhHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHhhhh
Confidence            45677777765  44566777778877765432 111111112334778888887643 378999999999999875433


Q ss_pred             hHH-HHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhh
Q 014864          151 HTK-VVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNF  229 (417)
Q Consensus       151 ~~~-~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l  229 (417)
                      ... ........+.+..++.+++++++..++.+|..++...+..-...+. ..+..++.....+.+..++..++.++..+
T Consensus       207 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~a~~~l~~i  285 (458)
T d1ibrb_         207 NFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMG-PALFAITIEAMKSDIDEVALQGIEFWSNV  285 (458)
T ss_dssp             HHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTT-TTHHHHHHHHHHCSSHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHhHhhHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence            221 1222235677778888899999999999999998654432111111 13334433333677788888888888877


Q ss_pred             hcCC----------------C-CCCh----hhhhchHHHHHHhhcC-------CChHHHHHHHHHHHHhccCChHHHHHH
Q 014864          230 CRGK----------------P-QPPF----DQVSPALPALAHLIHS-------NDDEVLTDACWALSYLSDGTNDKIQAV  281 (417)
Q Consensus       230 ~~~~----------------~-~~~~----~~~~~~l~~L~~ll~~-------~~~~v~~~a~~~l~~l~~~~~~~~~~~  281 (417)
                      +...                + ....    ......+|.+...+..       ++..++..+..++..++....+.   +
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~---~  362 (458)
T d1ibrb_         286 CDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDD---I  362 (458)
T ss_dssp             HHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTT---H
T ss_pred             HHHHHHHHHhhhhHHHhhhHHHHHHHHHHHHHHHHHhhhHHhhhhcchhhhccccccHHHHHHHHHHHHHHhccHh---h
Confidence            6321                0 0000    1123344555555432       12357777888888776533221   1


Q ss_pred             HHcCChHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHH
Q 014864          282 IEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNRE  361 (417)
Q Consensus       282 ~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~  361 (417)
                      .. .+++.+...+.++++.+|..|+.+|+.++.+.........-..+++.++..++++ ++.||..|+|+|+.++...++
T Consensus       363 ~~-~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~-~~~VR~~a~~~l~~i~~~~~~  440 (458)
T d1ibrb_         363 VP-HVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDP-SVVVRDTAAWTVGRICELLPE  440 (458)
T ss_dssp             HH-HHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCS-CHHHHHHHHHHHHHHHHHGGG
T ss_pred             hh-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHhhc
Confidence            11 2567788888999999999999999999975432211112346789999999998 999999999999999753221


Q ss_pred             HHHHHHHCCCHHHHHHHh
Q 014864          362 QIQAVIEANIIGPLVALL  379 (417)
Q Consensus       362 ~~~~l~~~~~i~~L~~~l  379 (417)
                      .   ......++.++..|
T Consensus       441 ~---~~~~~~l~~ll~~l  455 (458)
T d1ibrb_         441 A---AINDVYLAPLLQCL  455 (458)
T ss_dssp             G---CCSTTTHHHHHHHH
T ss_pred             c---cchhhHHHHHHHHH
Confidence            1   11233466666554


No 23 
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.99  E-value=5.6e-09  Score=108.41  Aligned_cols=276  Identities=12%  Similarity=0.126  Sum_probs=183.9

Q ss_pred             CHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHH
Q 014864          117 VVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDL  196 (417)
Q Consensus       117 ~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~  196 (417)
                      +++.+...+....+..++..++.+|..+....+....... ..+++.|+..+.+++..++..|+.+|+.++...+..   
T Consensus       131 l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~g~~l~~~~-~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~~~~~~---  206 (1207)
T d1u6gc_         131 ITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFH-PSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNI---  206 (1207)
T ss_dssp             HHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTTTH-HHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC------
T ss_pred             HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHhhHhhHHHH-HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHCCHH---
Confidence            4555666666555588999999999988763221111111 135677778888899999999999999998654321   


Q ss_pred             HHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChH
Q 014864          197 VLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGKPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTND  276 (417)
Q Consensus       197 ~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~  276 (417)
                       .-...++.++..+..+.+...++.++.++..+++..+.........++|.+...+.+++++++..++.++..++...+.
T Consensus       207 -~~~~~~~~ll~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~l~~i~~~l~~~l~~~~~~~r~~al~~l~~l~~~~~~  285 (1207)
T d1u6gc_         207 -VFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPK  285 (1207)
T ss_dssp             --CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHHHHHSSGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHHCTTC
T ss_pred             -HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhChh
Confidence             1123467777777566666677778888888888655443445578899999999999999999998888887654321


Q ss_pred             HHHHHHHcCChHHHHhh-------------------------------------cCCCChhhHHHHHHHHHHhhcCChHH
Q 014864          277 KIQAVIEAGVFPRLAEF-------------------------------------LMHPSPSVLIPALRTVGNIVTGDDMQ  319 (417)
Q Consensus       277 ~~~~~~~~~~~~~L~~~-------------------------------------l~~~~~~v~~~a~~~L~~l~~~~~~~  319 (417)
                      ....... .+++.+...                                     ..+..+.++..++.+|+.+....++.
T Consensus       286 ~~~~~~~-~ii~~~l~~l~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~vR~~a~~~L~~l~~~~~~~  364 (1207)
T d1u6gc_         286 EVYPHVS-TIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEM  364 (1207)
T ss_dssp             CCHHHHH-HHHHHHTTCCCCC------------------------------------CTTHHHHHHHHHHHHHHTTCCTT
T ss_pred             hhhhhHH-HHHHHHHHHHhcCcchhhhhHHHHHhhhhhhccchhhhhHHHHHhhhhhhhHHHHHHHHHHHHhHHHHHHHH
Confidence            1110000 011111111                                     12335688999999999998776655


Q ss_pred             HHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcC------------------CHHHHHHHHHCCCHHHHHHHhcc
Q 014864          320 TQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAG------------------NREQIQAVIEANIIGPLVALLEN  381 (417)
Q Consensus       320 ~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~------------------~~~~~~~l~~~~~i~~L~~~l~~  381 (417)
                      ... .-..+++.++..+.+. ++.+|..+..+++.+...                  .+...-.-.-..+++.+...+.+
T Consensus       365 l~~-~~~~~~~~L~~~l~d~-~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~l~~  442 (1207)
T d1u6gc_         365 LPE-FYKTVSPALISRFKER-EENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKE  442 (1207)
T ss_dssp             HHH-HHTTTHHHHHSTTSCS-SSHHHHHHHHHHHHHHHHHCCC------------CCCHHHHHHHHTTHHHHHHHHHTTC
T ss_pred             HHH-HHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHhccchhhhhhchHHHHhhcchHHHHHHHhHHHHHHHHHHhcC
Confidence            443 3346889999999888 899999999988887631                  01100000113466777888888


Q ss_pred             CCHHHHHHHHHHHHHhhCC
Q 014864          382 AEFDIKKEAAWAISNATSG  400 (417)
Q Consensus       382 ~~~~v~~~a~~~L~nl~~~  400 (417)
                      .++.++..+..++..++..
T Consensus       443 ~~~~~r~~~~~~l~~l~~~  461 (1207)
T d1u6gc_         443 KSVKTRQCCFNMLTELVNV  461 (1207)
T ss_dssp             SCHHHHHHHHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHH
Confidence            8999999999999887653


No 24 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.96  E-value=2.8e-08  Score=98.85  Aligned_cols=313  Identities=13%  Similarity=0.088  Sum_probs=199.3

Q ss_pred             HHHHhhhcCCChHHHHHHHHHHHHhhhCCCC-CcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHH
Q 014864           76 PVMVAGVWSNDSGVQYECTTQFRKLLSIERS-PPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKV  154 (417)
Q Consensus        76 ~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~-~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~  154 (417)
                      ..+++.+.++++.++..++.++..++..+-+ ..+..     +++.|++.+.+++....+..|+.+|..++.........
T Consensus        98 ~~ll~~l~~~~~~vr~~~a~~i~~i~~~~~p~~~wpe-----li~~L~~~~~s~~~~~~~~~al~~l~~i~e~~~~~~~~  172 (861)
T d2bpta1          98 TNALTALVSIEPRIANAAAQLIAAIADIELPHGAWPE-----LMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQA  172 (861)
T ss_dssp             HHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGGTCCHH-----HHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSST
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCcCchHH-----HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            4566777888899999999999888754311 12333     47888888887765678888999999998643322221


Q ss_pred             HHhC--CChhHHHHhhC--CCCHHHHHHHHHHHHHhhCCCchHHH-HHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhh
Q 014864          155 VIDH--GAVPIFVKLLY--SPSDDVREQAVWALGNIAGDSPRCRD-LVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNF  229 (417)
Q Consensus       155 i~~~--g~i~~L~~ll~--~~~~~i~~~a~~~L~nl~~~~~~~~~-~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l  229 (417)
                      +...  ..++.++..+.  ..+..++..++.++.++...-+..-. .......++.+...+ ++++++++..++.++..+
T Consensus       173 ~~~~~~~il~~i~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~l~~i  251 (861)
T d2bpta1         173 LVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEAT-QAEDIEVQAAAFGCLCKI  251 (861)
T ss_dssp             TGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHH-TCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHhHhHHhhhhhhHHHHhHHHHh-cCCCHHHHHHHHHHHHHH
Confidence            1110  23344444443  36789999999999998755432111 111122355566666 788999999999999999


Q ss_pred             hcCCCCCChhhhhchHHH-HHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHH----------------cCChHHHHh
Q 014864          230 CRGKPQPPFDQVSPALPA-LAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIE----------------AGVFPRLAE  292 (417)
Q Consensus       230 ~~~~~~~~~~~~~~~l~~-L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~----------------~~~~~~L~~  292 (417)
                      +...+..-.......+.. +.....+.++.++..++..+..++............                ..+++.+..
T Consensus       252 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~l~~  331 (861)
T d2bpta1         252 MSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLN  331 (861)
T ss_dssp             HHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            876543333333333333 344556678889988888777765432211111110                123455555


Q ss_pred             hcCCC-------ChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCC-HHHHH
Q 014864          293 FLMHP-------SPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGN-REQIQ  364 (417)
Q Consensus       293 ~l~~~-------~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~-~~~~~  364 (417)
                      .+...       +...+..+..++..++...+.....    -..+.+...+.+. ++..+..++.+++.++.+. .....
T Consensus       332 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~a~~~l~~i~~~~~~~~~~  406 (861)
T d2bpta1         332 LLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILE----PVLEFVEQNITAD-NWRNREAAVMAFGSIMDGPDKVQRT  406 (861)
T ss_dssp             HTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGGHH----HHHHHHHHHTTCS-SHHHHHHHHHHHHHTSSSSCHHHHH
T ss_pred             HHHHhhccccchhHHHHHHHHHHHHHHHhhcchhhhh----hhcchhhhhhhhH-HHHHHHHHHHHHHHHHhhcchhhHH
Confidence            55432       2456677777777766433322111    1234455566666 8999999999999999754 33333


Q ss_pred             HHHHCCCHHHHHHHhccCCHHHHHHHHHHHHHhhCC
Q 014864          365 AVIEANIIGPLVALLENAEFDIKKEAAWAISNATSG  400 (417)
Q Consensus       365 ~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl~~~  400 (417)
                      ...+ .+++.++..+.+.++.+|..++|+++.++..
T Consensus       407 ~~l~-~~l~~l~~~l~d~~~~vr~~a~~~l~~l~~~  441 (861)
T d2bpta1         407 YYVH-QALPSILNLMNDQSLQVKETTAWCIGRIADS  441 (861)
T ss_dssp             HHHH-HHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHHHHhcCcchhhhhHHHHHHHHHHHH
Confidence            3333 5789999999999999999999999988653


No 25 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93  E-value=1.4e-08  Score=101.43  Aligned_cols=315  Identities=18%  Similarity=0.202  Sum_probs=196.1

Q ss_pred             CHHHHHhhhcCCC--hHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCC-CHHHHHHHHHHHHHHhCCCch
Q 014864           74 NLPVMVAGVWSND--SGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLRED-YPQLQFEAAWALTNIASGTSE  150 (417)
Q Consensus        74 ~l~~l~~~l~s~~--~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~-~~~~~~~a~~~L~~l~~~~~~  150 (417)
                      -++.+++.+.+++  ...+..++.++..+...- .+....-....+++.+++.+.+.+ ...++..|+.++.+.......
T Consensus       129 li~~L~~~l~~~~~~~~~~~~~l~~l~~i~~~~-~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~  207 (876)
T d1qgra_         129 LIPQLVANVTNPNSTEHMKESTLEAIGYICQDI-DPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA  207 (876)
T ss_dssp             HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHS-CHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHH
T ss_pred             HHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhh
Confidence            3566777776644  567777888888775432 111111112345788888886543 368999999999888764322


Q ss_pred             hHH-HHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhh
Q 014864          151 HTK-VVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNF  229 (417)
Q Consensus       151 ~~~-~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l  229 (417)
                      ... .....-+++.+...+.+++++++..++.+|..++...+..-...........+...+ .+.+..+...++..+..+
T Consensus       208 ~~~~~~~~~~i~~~l~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~i  286 (876)
T d1qgra_         208 NFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAM-KSDIDEVALQGIEFWSNV  286 (876)
T ss_dssp             HHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHH-TCSSHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHH
Confidence            111 111112456777788889999999999999999865554333333332333444444 667777777777777766


Q ss_pred             hcCC----------------CC-CCh----hhhhchHHHHHHhhcCC-------ChHHHHHHHHHHHHhccCChHHHHHH
Q 014864          230 CRGK----------------PQ-PPF----DQVSPALPALAHLIHSN-------DDEVLTDACWALSYLSDGTNDKIQAV  281 (417)
Q Consensus       230 ~~~~----------------~~-~~~----~~~~~~l~~L~~ll~~~-------~~~v~~~a~~~l~~l~~~~~~~~~~~  281 (417)
                      +...                +. ...    ......+|.+...+...       +..++..+..++..++......   +
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~---~  363 (876)
T d1qgra_         287 CDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDD---I  363 (876)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGG---G
T ss_pred             HHHHHHHHHHhhHHHHhhhhHHHHHHHHHHHHHHHHHHhhHHHHHhcccccccccchHHHHHHHHHHHHHHHhhhh---h
Confidence            6421                10 111    11234445555554321       2346677777777665332211   1


Q ss_pred             HHcCChHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHH
Q 014864          282 IEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNRE  361 (417)
Q Consensus       282 ~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~  361 (417)
                      +. .+++.+...+.++++..+..++..++.+..+.......-.-..+++.+...+.++ ++.+|..++|+++.++...+.
T Consensus       364 ~~-~~~~~i~~~l~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~-~~~vr~~a~~~l~~~~~~~~~  441 (876)
T d1qgra_         364 VP-HVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDP-SVVVRDTAAWTVGRICELLPE  441 (876)
T ss_dssp             HH-HHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCS-SHHHHHHHHHHHHHHHHHCGG
T ss_pred             hh-hhHHHHHHhhccchHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhhcCC-ccHHHHHHHHHHHHHHHHcch
Confidence            11 1455666777888999999999999999877654333333446788999999998 999999999999999863222


Q ss_pred             HHHHHHHCC----CHHHHHHHhccCCHHHHHHHHHHHHHhhC
Q 014864          362 QIQAVIEAN----IIGPLVALLENAEFDIKKEAAWAISNATS  399 (417)
Q Consensus       362 ~~~~l~~~~----~i~~L~~~l~~~~~~v~~~a~~~L~nl~~  399 (417)
                      ..   ....    +++.+...+. +++.++..+++++.++..
T Consensus       442 ~~---~~~~~~~~~~~~l~~~l~-~~~~v~~~~~~~l~~l~~  479 (876)
T d1qgra_         442 AA---INDVYLAPLLQCLIEGLS-AEPRVASNVCWAFSSLAE  479 (876)
T ss_dssp             GT---SSTTTHHHHHHHHHHHTT-SCHHHHHHHHHHHHHHHH
T ss_pred             hh---hhHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHH
Confidence            11   1112    3444555554 478999999999999864


No 26 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.91  E-value=4.5e-09  Score=104.72  Aligned_cols=311  Identities=11%  Similarity=0.152  Sum_probs=187.6

Q ss_pred             hhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHHHHhCC
Q 014864           80 AGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHG  159 (417)
Q Consensus        80 ~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g  159 (417)
                      ..+.++++..+..|+..+..+.... .+....-.-..+++.++..+.+++ +.++..++++++.++...+..   +....
T Consensus       376 ~~~~~~~~~~~~~a~~~l~~i~~~~-~~~~~~~~l~~~l~~l~~~l~d~~-~~vr~~a~~~l~~l~~~~~~~---~~~~~  450 (861)
T d2bpta1         376 QNITADNWRNREAAVMAFGSIMDGP-DKVQRTYYVHQALPSILNLMNDQS-LQVKETTAWCIGRIADSVAES---IDPQQ  450 (861)
T ss_dssp             HHTTCSSHHHHHHHHHHHHHTSSSS-CHHHHHHHHHHHHHHHHHGGGCSC-HHHHHHHHHHHHHHHHHHGGG---SCTTT
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHhhc-chhhHHHHHHHHHHHHHHHhcCcc-hhhhhHHHHHHHHHHHHhchh---hhhHH
Confidence            3455788889999999888886543 222222223346899999999988 999999999999987632111   11122


Q ss_pred             ChhHHHHhh---CCCCHHHHHHHHHHHHHhhCC----Cc-hHHHHHHhcCCHHHHHHHhcC-CCchhHHHHHHHHHhhhh
Q 014864          160 AVPIFVKLL---YSPSDDVREQAVWALGNIAGD----SP-RCRDLVLSQGGLVPLLAQLNG-QPKLSMLRNATWTLSNFC  230 (417)
Q Consensus       160 ~i~~L~~ll---~~~~~~i~~~a~~~L~nl~~~----~~-~~~~~~~~~g~i~~L~~ll~~-~~~~~~~~~a~~~l~~l~  230 (417)
                      .++.++..+   ...++.+...+++++.+++..    .. ......  ...+..++..... ..+..++..+..++..+.
T Consensus       451 ~~~~ll~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~i  528 (861)
T d2bpta1         451 HLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFY--PALVDGLIGAANRIDNEFNARASAFSALTTMV  528 (861)
T ss_dssp             THHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHSSSSSCGGGGGH--HHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHhccccChHHHHHHHHHHHHHHHHhhhcccchhhHHH--hhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence            333333322   135678888888888877631    11 111111  1124455555532 346678888888888888


Q ss_pred             cCCCCCChhhhhchHHHHHH----hhcCCC-----------hHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcC
Q 014864          231 RGKPQPPFDQVSPALPALAH----LIHSND-----------DEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLM  295 (417)
Q Consensus       231 ~~~~~~~~~~~~~~l~~L~~----ll~~~~-----------~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~  295 (417)
                      ...+...........+.+..    .+....           ..++..++.++..+............+ .+++.+...+.
T Consensus       529 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~-~l~~~l~~~l~  607 (861)
T d2bpta1         529 EYATDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVAD-MLMGLFFRLLE  607 (861)
T ss_dssp             HHCCGGGHHHHHHHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGTGGGHH-HHHHHHHHHHH
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhHHHHHHHHHHHHHHHHHhcchhhHHHHHH-HHHHHHhhhcc
Confidence            76544333333333333333    232211           123333444444443222111111111 24555666665


Q ss_pred             CC-ChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHH
Q 014864          296 HP-SPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGP  374 (417)
Q Consensus       296 ~~-~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~  374 (417)
                      .. +..++..++.+++.++..........+ ..++|.+...+++. ++.++..|+.+++.++...++....... .+++.
T Consensus       608 ~~~~~~v~~~~l~~l~~l~~~~~~~~~~~l-~~i~p~l~~~l~~~-~~~v~~~a~~~l~~i~~~~~~~~~~~~~-~i~~~  684 (861)
T d2bpta1         608 KKDSAFIEDDVFYAISALAASLGKGFEKYL-ETFSPYLLKALNQV-DSPVSITAVGFIADISNSLEEDFRRYSD-AMMNV  684 (861)
T ss_dssp             STTGGGTHHHHHHHHHHHHHHHGGGGHHHH-HHHHHHHHHHHHCT-TSHHHHHHHHHHHHHHHHTGGGGHHHHH-HHHHH
T ss_pred             cCCchhHHHHHHHHHHHHHHHhhHHHHHHH-HHHhhHHHHHhCCC-CHHHHHHHHHHHHHHHHHhHHHhHhhHH-HHHHH
Confidence            44 467888999999998865443333222 25788999999988 8899999999999998744443333332 47888


Q ss_pred             HHHHhccC--CHHHHHHHHHHHHHhhCCC
Q 014864          375 LVALLENA--EFDIKKEAAWAISNATSGG  401 (417)
Q Consensus       375 L~~~l~~~--~~~v~~~a~~~L~nl~~~~  401 (417)
                      |++.+.+.  +..+|..++.+|+.++...
T Consensus       685 L~~~l~~~~~~~~~k~~~~~~l~~i~~~~  713 (861)
T d2bpta1         685 LAQMISNPNARRELKPAVLSVFGDIASNI  713 (861)
T ss_dssp             HHHHHHCTTCCTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            88888764  5689999999999987653


No 27 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.89  E-value=3.3e-08  Score=94.22  Aligned_cols=260  Identities=14%  Similarity=0.070  Sum_probs=166.7

Q ss_pred             CHHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHhCCCchh
Q 014864           74 NLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLL--REDYPQLQFEAAWALTNIASGTSEH  151 (417)
Q Consensus        74 ~l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~--~~~~~~~~~~a~~~L~~l~~~~~~~  151 (417)
                      .++.+.+.|.++++..+..|++.+.++..    +..-..    +.+.+.+++.  +++ +.+|..|+.++..+....++.
T Consensus       104 ~iNtl~KDL~s~n~~ir~lALr~L~~i~~----~~i~~~----l~~~V~k~l~~~d~~-p~VRk~A~l~l~ki~~~~pd~  174 (584)
T d2vgla_         104 INNAIKNDLASRNPTFMGLALHCIANVGS----REMAEA----FAGEIPKILVAGDTM-DSVKQSAALCLLRLYRTSPDL  174 (584)
T ss_dssp             HHHHHHHHHHSCCHHHHHHHHHHHHHHCC----HHHHHH----HTTHHHHHHHCSSSC-HHHHHHHHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHcCCCCHHHHHHHHHHHHcCCC----HHHHHH----HHHHHHHhhccCCCc-HHHHHHHHHHHHHHHHhChhh
Confidence            45677777888999999999999988742    222211    2445555444  444 889999999999998755543


Q ss_pred             HHHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHH---------------------------
Q 014864          152 TKVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLV---------------------------  204 (417)
Q Consensus       152 ~~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~---------------------------  204 (417)
                         ....+.++.+..+|.++++.++..|++++..++...+........ ..+.                           
T Consensus       175 ---~~~~~~~~~L~~lL~D~d~~V~~aAl~ll~eI~~~~p~~~~~~~~-~~i~~L~~ll~~~~~~~~~~~~~~~~~~~lq  250 (584)
T d2vgla_         175 ---VPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVS-LAVSRLSRIVTSASTDLQDYTYYFVPAPWLS  250 (584)
T ss_dssp             ---CCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHHHTTHHH-HHHHHHHHHHHCCSSSCSTTEETTEESHHHH
T ss_pred             ---hhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHhCHHHHHHHHH-HHHHHHHHHHhhcccchHHHHHhhcccHHHH
Confidence               223467899999999999999999999999998665432111100 0111                           


Q ss_pred             -HHHHHhc---CCCchhHHHHHHHHHhhhhc----CC------------------------CCCChhhhhchHHHHHHhh
Q 014864          205 -PLLAQLN---GQPKLSMLRNATWTLSNFCR----GK------------------------PQPPFDQVSPALPALAHLI  252 (417)
Q Consensus       205 -~L~~ll~---~~~~~~~~~~a~~~l~~l~~----~~------------------------~~~~~~~~~~~l~~L~~ll  252 (417)
                       .++.++.   ...++.........+..+..    ..                        ..........+++.+..+|
T Consensus       251 ~~il~ll~~l~~~~~~~~~~~l~~~l~~Il~~~~~~~~~~~~~~~~~~~aVl~e~i~~i~~~~~~~~~~~~~i~~l~~lL  330 (584)
T d2vgla_         251 VKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFL  330 (584)
T ss_dssp             HHHHHHGGGSSSCSSHHHHHHHHHHHHHHHHHHHSCCSCSSHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHhhhccccccHHhhhhHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence             1222221   11222222211111111100    00                        0111222345677888899


Q ss_pred             cCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcC-CCChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHH
Q 014864          253 HSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLM-HPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPC  331 (417)
Q Consensus       253 ~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~  331 (417)
                      .+.+++++..++.++..++......  .++.. ....++..+. +++..++..++..|..++.  +.....     +++.
T Consensus       331 ~s~~~niry~aL~~L~~L~~~~~~~--~~~~~-~~~~il~~l~~~~~~~Ir~~aL~lL~~L~n--~~Ni~~-----Iv~e  400 (584)
T d2vgla_         331 QHRETNLRYLALESMCTLASSEFSH--EAVKT-HIETVINALKTERDVSVRQRAVDLLYAMCD--RSNAQQ-----IVAE  400 (584)
T ss_dssp             SCSCHHHHHHHHHHHHHHTTCTTTH--HHHHT-THHHHHHHHTTCCCHHHHHHHHHHHHHHCC--HHHHHH-----HHHH
T ss_pred             cCCCcchHHHHHHHHHHHHccCCCH--HHHHH-HHHHHHHhcccCchhHHHHHHHHHHHHhCC--HHHHHH-----HHHH
Confidence            9999999999999999998654321  12222 3455555554 5678899999999999983  344442     4677


Q ss_pred             HHHhhcCCCchhHHHHHHHHHHHHhc
Q 014864          332 LLNLLSGNYKKSIKKEACWTVSNITA  357 (417)
Q Consensus       332 L~~ll~~~~~~~v~~~a~~~L~nl~~  357 (417)
                      |...+.+. +.+++.+++.+++.++.
T Consensus       401 L~~yl~~~-d~~~k~~~i~~I~~la~  425 (584)
T d2vgla_         401 MLSYLETA-DYSIREEIVLKVAILAE  425 (584)
T ss_dssp             HHHHHHHC-CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhC-CHHHHHHHHHHHHHHHH
Confidence            88888888 99999999999999985


No 28 
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.78  E-value=2.4e-07  Score=82.66  Aligned_cols=276  Identities=13%  Similarity=0.087  Sum_probs=179.3

Q ss_pred             HHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHH-HhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHH
Q 014864           76 PVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVI-RSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKV  154 (417)
Q Consensus        76 ~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~-~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~  154 (417)
                      +.+...+.+++......+...+..+++.. .......- .......+-.+...++ .+.+..++.++..+... ++.+..
T Consensus       125 ~~f~~~l~~~d~~~~~~s~~i~~ll~~~~-~~~~~~~e~l~~~~~~l~~l~~~~~-~~~~~i~v~~lq~llr~-~~~R~~  201 (477)
T d1ho8a_         125 QLFDVSLKGDFQTVLISGFNVVSLLVQNG-LHNVKLVEKLLKNNNLINILQNIEQ-MDTCYVCIRLLQELAVI-PEYRDV  201 (477)
T ss_dssp             HHHHHCSCSSHHHHHHHHHHHHHHHTSTT-TCCHHHHHHHHHCHHHHHHHHCTTC-HHHHHHHHHHHHHHHTS-HHHHHH
T ss_pred             HHHHHhccCchhHHHHHHHHHHHHHHhcc-ccccchHHHHHHhhHHHHHhhcccc-cchHHHHHHHHHHHhcC-ccHHHH
Confidence            44455566677777777777777776553 22222110 1112333344445566 78888899999998885 777777


Q ss_pred             HHh--CCChhHHHHhhCC-----------------CCHHHHHHHHHHHHHhhCCCchHHHHHHhc--CCHHHHHHHhcCC
Q 014864          155 VID--HGAVPIFVKLLYS-----------------PSDDVREQAVWALGNIAGDSPRCRDLVLSQ--GGLVPLLAQLNGQ  213 (417)
Q Consensus       155 i~~--~g~i~~L~~ll~~-----------------~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~--g~i~~L~~ll~~~  213 (417)
                      +..  ...++.|+..|..                 .+..++.+++.+++-++.+.. ....+.+.  +.++.++.++..+
T Consensus       202 fw~~~~~~~~~l~~il~~a~~~~~~~~~~~~~~~~~~~Ql~Y~~ll~lWlLSF~~~-~~~~l~~~~~~~i~~l~~i~~~s  280 (477)
T d1ho8a_         202 IWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFNPV-FANELVQKYLSDFLDLLKLVKIT  280 (477)
T ss_dssp             HHTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHTTSHH-HHHHHHTTSHHHHHHHHHHHHHC
T ss_pred             HHHcccchHHHHHHHHHHHhcccccchhhcccCCCccHHHHHHHHHHHHHHHcCHH-HHHHHHHhhhHHHHHHHHHHHhh
Confidence            643  2345556555532                 235788999999999987654 44555554  3488889999888


Q ss_pred             CchhHHHHHHHHHhhhhcCCCCCCh------hhhhchHHHHHHhhcC--CChHHHHHHHHHHHH-------hccCChHHH
Q 014864          214 PKLSMLRNATWTLSNFCRGKPQPPF------DQVSPALPALAHLIHS--NDDEVLTDACWALSY-------LSDGTNDKI  278 (417)
Q Consensus       214 ~~~~~~~~a~~~l~~l~~~~~~~~~------~~~~~~l~~L~~ll~~--~~~~v~~~a~~~l~~-------l~~~~~~~~  278 (417)
                      ..+.+.+-++.++.|++........      ....++++.+..+...  .|+++..+.-..-..       ++.- ++..
T Consensus       281 ~KEKvvRv~l~~l~Nll~~~~~~~~~~~~~~~v~~~~l~~l~~L~~r~~~Dedl~edl~~L~~~L~~~~k~lTsf-d~Y~  359 (477)
T d1ho8a_         281 IKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGNALPTVQSLSERKYSDEELRQDISNLKEILENEYQELTSF-DEYV  359 (477)
T ss_dssp             CSHHHHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHCHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHHHHHTCCHH-HHHH
T ss_pred             hHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcchhHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhcCcH-HHHH
Confidence            8999999999999999976422111      1123445554444332  377765543222111       1110 0111


Q ss_pred             HH----------------HHHc----------CChHHHHhhcC----------CCChhhHHHHHHHHHHhhcCChHHHHH
Q 014864          279 QA----------------VIEA----------GVFPRLAEFLM----------HPSPSVLIPALRTVGNIVTGDDMQTQC  322 (417)
Q Consensus       279 ~~----------------~~~~----------~~~~~L~~~l~----------~~~~~v~~~a~~~L~~l~~~~~~~~~~  322 (417)
                      ..                +-..          .++..|+.+|.          +.++.+..-||.=||.++...+.....
T Consensus       360 ~Ev~Sg~L~WSP~H~se~FW~EN~~kf~e~~~~llk~L~~lL~~~~~~~~~~~s~D~~~lAVAc~DiGefvr~~P~gr~i  439 (477)
T d1ho8a_         360 AELDSKLLCWSPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDV  439 (477)
T ss_dssp             HHHHHTCCCCCGGGGCHHHHHHHSGGGSSGGGHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHH
T ss_pred             HHHhcCCCCCCCCcCChhHHHHHHHhhcccchHHHHHHHHHHhhcccccccccCCCcceeehhhhhHHHHHHHCcchhHH
Confidence            11                1111          34678888885          235777888999999999999988887


Q ss_pred             HHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhc
Q 014864          323 VIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITA  357 (417)
Q Consensus       323 ~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  357 (417)
                      +-+.|+=..++.++.++ +++||.+|..++..+..
T Consensus       440 l~~lg~K~~vM~Lm~h~-d~~Vr~eAL~avQklm~  473 (477)
T d1ho8a_         440 LDKTGGKADIMELLNHS-DSRVKYEALKATQAIIG  473 (477)
T ss_dssp             HHHHSHHHHHHHHTSCS-SHHHHHHHHHHHHHHHH
T ss_pred             HHHcCcHHHHHHHhcCC-CHHHHHHHHHHHHHHHH
Confidence            77889999999999999 99999999999988754


No 29 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.75  E-value=1.1e-07  Score=94.76  Aligned_cols=311  Identities=13%  Similarity=0.064  Sum_probs=193.2

Q ss_pred             HHHHhhhcCCChHHHHHHHHHHHHhhhCCC-CCcHHHHHHhCCHHHHHHhhcCCC-CHHHHHHHHHHHHHHhCCC-chhH
Q 014864           76 PVMVAGVWSNDSGVQYECTTQFRKLLSIER-SPPIEEVIRSGVVPRFVEFLLRED-YPQLQFEAAWALTNIASGT-SEHT  152 (417)
Q Consensus        76 ~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~-~~~~~~~~~~g~i~~Lv~lL~~~~-~~~~~~~a~~~L~~l~~~~-~~~~  152 (417)
                      ..+++.+.+++. .+..++.++..++..+- ...|     .+++|.|++.+.+++ .+.++..++.+|..++..- ++..
T Consensus        93 ~~ll~~l~~~~~-~~~~~a~~i~~i~~~~~p~~~W-----peli~~L~~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~  166 (876)
T d1qgra_          93 NYVLHTLGTETY-RPSSASQCVAGIACAEIPVNQW-----PELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQL  166 (876)
T ss_dssp             HHHHHHTTTCCS-SSCHHHHHHHHHHHHHGGGTCC-----TTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred             HHHHHHhcCCcH-HHHHHHHHHHHHHHHHCCcccc-----HHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHCCHHHH
Confidence            456666766554 34445666666654320 1112     246889999887654 3678888999999987632 2221


Q ss_pred             HHHHhCCChhHHHHhhCC--CCHHHHHHHHHHHHHhhCCCchHHH-HHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhh
Q 014864          153 KVVIDHGAVPIFVKLLYS--PSDDVREQAVWALGNIAGDSPRCRD-LVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNF  229 (417)
Q Consensus       153 ~~i~~~g~i~~L~~ll~~--~~~~i~~~a~~~L~nl~~~~~~~~~-~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l  229 (417)
                      .... ..+++.++..+.+  ++..++..++.++.+........-. .....-.++.+...+ +++++.++..++.++..+
T Consensus       167 ~~~~-~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~~~-~~~~~~v~~~~~~~l~~l  244 (876)
T d1qgra_         167 QDKS-NEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEAT-QCPDTRVRVAALQNLVKI  244 (876)
T ss_dssp             GGGH-HHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHT-TCSSHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHH
Confidence            1111 2467788887764  5678999999999887754332111 001111244455555 778899999999999999


Q ss_pred             hcCCCCCChhhh-hchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHH--------------------HHHcCChH
Q 014864          230 CRGKPQPPFDQV-SPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQA--------------------VIEAGVFP  288 (417)
Q Consensus       230 ~~~~~~~~~~~~-~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~--------------------~~~~~~~~  288 (417)
                      +...+....... ..+.+.+...+.++++++...++..+..++.........                    .....+++
T Consensus       245 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  324 (876)
T d1qgra_         245 MSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVP  324 (876)
T ss_dssp             HHHSGGGCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHH
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence            886544333333 334556666777778888877777666665322111100                    01112334


Q ss_pred             HHHhhcCC-------CChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcC-CH
Q 014864          289 RLAEFLMH-------PSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAG-NR  360 (417)
Q Consensus       289 ~L~~~l~~-------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~-~~  360 (417)
                      .+...+..       .+..++..|..++..++.......-    ..+++.+...+.+. ++..|..+++.++.+..+ ..
T Consensus       325 ~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~----~~~~~~i~~~l~~~-~~~~r~~~~~~l~~~~~~~~~  399 (876)
T d1qgra_         325 ILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIV----PHVLPFIKEHIKNP-DWRYRDAAVMAFGCILEGPEP  399 (876)
T ss_dssp             HHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGGGH----HHHHHHHHHHTTCS-SHHHHHHHHHHHHHTSSSSCH
T ss_pred             hhHHHHHhcccccccccchHHHHHHHHHHHHHHHhhhhhh----hhhHHHHHHhhccc-hHHHHHHHHHHHHhhhhhhhH
Confidence            44444432       2245677777777777643332211    12345666777777 899999999999999875 34


Q ss_pred             HHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHHHHhhCC
Q 014864          361 EQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSG  400 (417)
Q Consensus       361 ~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl~~~  400 (417)
                      ........ .+++.++..+.++++.++..|+|+++.++..
T Consensus       400 ~~~~~~~~-~~~~~l~~~l~d~~~~vr~~a~~~l~~~~~~  438 (876)
T d1qgra_         400 SQLKPLVI-QAMPTLIELMKDPSVVVRDTAAWTVGRICEL  438 (876)
T ss_dssp             HHHHHHHH-HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHHHhhcCCccHHHHHHHHHHHHHHHH
Confidence            44444333 5788999999999999999999999998753


No 30 
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.69  E-value=1.2e-06  Score=78.01  Aligned_cols=321  Identities=12%  Similarity=0.051  Sum_probs=200.6

Q ss_pred             CHHHHHhhhcC-CChHHHHHHHHHHHHhhhCCCCCcHHH----HHHhC--CHHHHHHhhcCCCCHHHHHHHHHHHHHHhC
Q 014864           74 NLPVMVAGVWS-NDSGVQYECTTQFRKLLSIERSPPIEE----VIRSG--VVPRFVEFLLREDYPQLQFEAAWALTNIAS  146 (417)
Q Consensus        74 ~l~~l~~~l~s-~~~~~~~~a~~~l~~l~~~~~~~~~~~----~~~~g--~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~  146 (417)
                      .+..+++.|.. ..+++....+..+..++..+  +....    +....  .-+.+..++..++ .-....+...+..++.
T Consensus        75 ~~~~~l~lL~~~sk~d~vqyvL~Li~dLL~~d--~~~~~~~~~~~~~~~~~~~~f~~~l~~~d-~~~~~~s~~i~~ll~~  151 (477)
T d1ho8a_          75 TLIPLIHLLSTSDNEDCKKSVQNLIAELLSSD--KYGDDTVKFFQEDPKQLEQLFDVSLKGDF-QTVLISGFNVVSLLVQ  151 (477)
T ss_dssp             THHHHHHHHHSCCCHHHHHHHHHHHHHHHHCS--SSSHHHHHHHHHCTTHHHHHHHHCSCSSH-HHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHhhcCcHHHHHHHHHHHHHHHhcC--cchhHHHHHHhhCccchhHHHHHhccCch-hHHHHHHHHHHHHHHh
Confidence            46778888875 55666677777788887654  22221    11211  2345556665555 5667777777888877


Q ss_pred             CCchhHHHHHhC-CChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHh--cCCHHHHHHHhcC-----------
Q 014864          147 GTSEHTKVVIDH-GAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLS--QGGLVPLLAQLNG-----------  212 (417)
Q Consensus       147 ~~~~~~~~i~~~-g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~--~g~i~~L~~ll~~-----------  212 (417)
                      .........-.. .....+-.+....+...+..|+.++..+....+ +|..+..  ...+.+++..+..           
T Consensus       152 ~~~~~~~~~e~l~~~~~~l~~l~~~~~~~~~~i~v~~lq~llr~~~-~R~~fw~~~~~~~~~l~~il~~a~~~~~~~~~~  230 (477)
T d1ho8a_         152 NGLHNVKLVEKLLKNNNLINILQNIEQMDTCYVCIRLLQELAVIPE-YRDVIWLHEKKFMPTLFKILQRATDSQLATRIV  230 (477)
T ss_dssp             TTTCCHHHHHHHHHCHHHHHHHHCTTCHHHHHHHHHHHHHHHTSHH-HHHHHHTTHHHHHHHHHHHHHHHHC--------
T ss_pred             ccccccchHHHHHHhhHHHHHhhcccccchHHHHHHHHHHHhcCcc-HHHHHHHcccchHHHHHHHHHHHhcccccchhh
Confidence            543332211111 123333344466888888899999988887755 7777643  3346666666621           


Q ss_pred             -----CCchhHHHHHHHHHhhhhcCCCCCChhhh--hchHHHHHHhhcC-CChHHHHHHHHHHHHhccCCh-----HHHH
Q 014864          213 -----QPKLSMLRNATWTLSNFCRGKPQPPFDQV--SPALPALAHLIHS-NDDEVLTDACWALSYLSDGTN-----DKIQ  279 (417)
Q Consensus       213 -----~~~~~~~~~a~~~l~~l~~~~~~~~~~~~--~~~l~~L~~ll~~-~~~~v~~~a~~~l~~l~~~~~-----~~~~  279 (417)
                           .....++..++.+++-|+...........  ...++.++.++.. .-+++..-++.++.|++....     ....
T Consensus       231 ~~~~~~~~~Ql~Y~~ll~lWlLSF~~~~~~~l~~~~~~~i~~l~~i~~~s~KEKvvRv~l~~l~Nll~~~~~~~~~~~~~  310 (477)
T d1ho8a_         231 ATNSNHLGIQLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCCSTRVKQHKKVIKQ  310 (477)
T ss_dssp             -----CCHHHHHHHHHHHHHHHTTSHHHHHHHHTTSHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTSSSSTTHHHHHHH
T ss_pred             cccCCCccHHHHHHHHHHHHHHHcCHHHHHHHHHhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhhhhhHHHH
Confidence                 12357788899999998875322111111  2447778888754 467888888999999986532     1234


Q ss_pred             HHHHcCChHHHHhhcCCC--ChhhHHHHHHHHHHhhc----------------------CChHHH-HHHH----------
Q 014864          280 AVIEAGVFPRLAEFLMHP--SPSVLIPALRTVGNIVT----------------------GDDMQT-QCVI----------  324 (417)
Q Consensus       280 ~~~~~~~~~~L~~~l~~~--~~~v~~~a~~~L~~l~~----------------------~~~~~~-~~~~----------  324 (417)
                      .++..++++.+-.+....  |+++. ..+..|.....                      -++..+ ..+.          
T Consensus       311 ~~v~~~~l~~l~~L~~r~~~Dedl~-edl~~L~~~L~~~~k~lTsfd~Y~~Ev~Sg~L~WSP~H~se~FW~EN~~kf~e~  389 (477)
T d1ho8a_         311 LLLLGNALPTVQSLSERKYSDEELR-QDISNLKEILENEYQELTSFDEYVAELDSKLLCWSPPHVDNGFWSDNIDEFKKD  389 (477)
T ss_dssp             HHHHHCHHHHHHHHHSSCCSSHHHH-HHHHHHHHHHHHHHHTCCHHHHHHHHHHHTCCCCCGGGGCHHHHHHHSGGGSSG
T ss_pred             HHHHcchhHHHHHHhcCCCCCHHHH-HHHHHHHHHHHHHHHhcCcHHHHHHHHhcCCCCCCCCcCChhHHHHHHHhhccc
Confidence            456666665544443332  44432 22222222211                      111111 1122          


Q ss_pred             HcCChHHHHHhhcC---------CCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHHH
Q 014864          325 EYQALPCLLNLLSG---------NYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAIS  395 (417)
Q Consensus       325 ~~~~l~~L~~ll~~---------~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~  395 (417)
                      +..++..|+++|.+         +.++.+..-||.=+|.++...|..+..+-+.|+=..+++++.++|++||.+|+.|+.
T Consensus       390 ~~~llk~L~~lL~~~~~~~~~~~s~D~~~lAVAc~DiGefvr~~P~gr~il~~lg~K~~vM~Lm~h~d~~Vr~eAL~avQ  469 (477)
T d1ho8a_         390 NYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELLNHSDSRVKYEALKATQ  469 (477)
T ss_dssp             GGHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHSHHHHHHHHTSCSSHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHhhcccccccccCCCcceeehhhhhHHHHHHHCcchhHHHHHcCcHHHHHHHhcCCCHHHHHHHHHHHH
Confidence            12557889999862         227788899999999999987877777777899999999999999999999999998


Q ss_pred             HhhC
Q 014864          396 NATS  399 (417)
Q Consensus       396 nl~~  399 (417)
                      .+..
T Consensus       470 klm~  473 (477)
T d1ho8a_         470 AIIG  473 (477)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764


No 31 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=98.54  E-value=5.9e-09  Score=76.02  Aligned_cols=109  Identities=21%  Similarity=0.218  Sum_probs=87.6

Q ss_pred             hcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHH
Q 014864          252 IHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPC  331 (417)
Q Consensus       252 l~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~  331 (417)
                      |.++|+.|+..++++|+.+..            ..++.|+..|.++++.++..|+++|+++..  +         +.++.
T Consensus         1 L~D~~~~VR~~A~~aL~~~~~------------~~~~~L~~~l~d~~~~vR~~a~~~L~~~~~--~---------~~~~~   57 (111)
T d1te4a_           1 MADENKWVRRDVSTALSRMGD------------EAFEPLLESLSNEDWRIRGAAAWIIGNFQD--E---------RAVEP   57 (111)
T ss_dssp             CCSSCCCSSSSCCSSTTSCSS------------TTHHHHHHGGGCSCHHHHHHHHHHHGGGCS--H---------HHHHH
T ss_pred             CCCcCHHHHHHHHHHHHHhCH------------HHHHHHHHHHcCCCHHHHHHHHHHHHhcch--h---------hhHHH
Confidence            345677788888888776531            246778899999999999999999998752  1         24688


Q ss_pred             HHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHHH
Q 014864          332 LLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAIS  395 (417)
Q Consensus       332 L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~  395 (417)
                      |..+|+++ ++.||..|+++|+.+.  ++         +.++.|..+++++++.+|..|+.+|.
T Consensus        58 L~~~l~d~-~~~VR~~a~~aL~~i~--~~---------~~~~~L~~ll~d~~~~vr~~A~~aL~  109 (111)
T d1te4a_          58 LIKLLEDD-SGFVRSGAARSLEQIG--GE---------RVRAAMEKLAETGTGFARKVAVNYLE  109 (111)
T ss_dssp             HHHHHHHC-CTHHHHHHHHHHHHHC--SH---------HHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred             HHhhhccc-hhHHHHHHHHHHHHhC--cc---------chHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            99999998 9999999999999883  23         35777888999999999999998874


No 32 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=98.42  E-value=1.8e-08  Score=73.38  Aligned_cols=108  Identities=18%  Similarity=0.206  Sum_probs=87.1

Q ss_pred             cCCCCHHHHHHHHHHHHHHhCCCchhHHHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHH
Q 014864          126 LREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVP  205 (417)
Q Consensus       126 ~~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~  205 (417)
                      ++++ +.+|..|+++|+.+..            ..++.|+..|.++++.++..++++|+++...           +.++.
T Consensus         2 ~D~~-~~VR~~A~~aL~~~~~------------~~~~~L~~~l~d~~~~vR~~a~~~L~~~~~~-----------~~~~~   57 (111)
T d1te4a_           2 ADEN-KWVRRDVSTALSRMGD------------EAFEPLLESLSNEDWRIRGAAAWIIGNFQDE-----------RAVEP   57 (111)
T ss_dssp             CSSC-CCSSSSCCSSTTSCSS------------TTHHHHHHGGGCSCHHHHHHHHHHHGGGCSH-----------HHHHH
T ss_pred             CCcC-HHHHHHHHHHHHHhCH------------HHHHHHHHHHcCCCHHHHHHHHHHHHhcchh-----------hhHHH
Confidence            4455 6778888888776532            4678899999999999999999999987421           24678


Q ss_pred             HHHHhcCCCchhHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHH
Q 014864          206 LLAQLNGQPKLSMLRNATWTLSNFCRGKPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALS  268 (417)
Q Consensus       206 L~~ll~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~  268 (417)
                      |..++ .++++.++..++++|..+..          ...++.|..++.++++.++..++.+|.
T Consensus        58 L~~~l-~d~~~~VR~~a~~aL~~i~~----------~~~~~~L~~ll~d~~~~vr~~A~~aL~  109 (111)
T d1te4a_          58 LIKLL-EDDSGFVRSGAARSLEQIGG----------ERVRAAMEKLAETGTGFARKVAVNYLE  109 (111)
T ss_dssp             HHHHH-HHCCTHHHHHHHHHHHHHCS----------HHHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred             HHhhh-ccchhHHHHHHHHHHHHhCc----------cchHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            88988 67899999999999998743          367888999999999999999888764


No 33 
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.71  E-value=0.00089  Score=55.70  Aligned_cols=240  Identities=15%  Similarity=0.178  Sum_probs=165.0

Q ss_pred             HHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHH----HHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhh
Q 014864          155 VIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCR----DLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFC  230 (417)
Q Consensus       155 i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~----~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~  230 (417)
                      +...+.+..|+..|..-+.+-+..+..+++++.+.....+    +.+...  ...+..++....++++.-.+...|....
T Consensus        65 ~~~~d~l~~Li~~L~~L~fE~RKD~~~if~~llR~~~~~~~p~v~Yl~~~--~eil~~L~~gye~~eiAl~~G~mLREci  142 (330)
T d1upka_          65 LYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQ--QNILFMLLKGYESPEIALNCGIMLRECI  142 (330)
T ss_dssp             HHHHSHHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTC--THHHHHHHHGGGSTTTHHHHHHHHHHHH
T ss_pred             HHHhChHHHHHHhCCCCCCchhhhHHHHHHHHhhcCCCCCCccHHHHHcC--HHHHHHHHhhcCCcchhhhhhHHHHHHH
Confidence            3445788889999988889999999999999986544333    444432  3444444444456777777777777777


Q ss_pred             cCCCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcC---ChHHHHhhcCCCChhhHHHHHH
Q 014864          231 RGKPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAG---VFPRLAEFLMHPSPSVLIPALR  307 (417)
Q Consensus       231 ~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~---~~~~L~~~l~~~~~~v~~~a~~  307 (417)
                      +...-.......+.+-.+...+..++-++..+|..++..+...+......++..+   ++...-.+|.+++.-++..++.
T Consensus       143 k~e~lak~iL~s~~f~~fF~yv~~~~FdiasDAf~TfkelLt~hk~~~aefl~~Nyd~Ff~~~~~LL~s~NYVtrRqSlK  222 (330)
T d1upka_         143 RHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLK  222 (330)
T ss_dssp             TSHHHHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCSSHHHHHHHHH
T ss_pred             hhHHHHHHHHccHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhCHHHHHHHHHHhHHHHHHHHHHHhcCCchHHHHHHHH
Confidence            7643333344455666777888889999999999999988777766555565543   5677788999999999999999


Q ss_pred             HHHHhhcCChHH---HHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcC---CHHHHHHHHH--CCCHHHHHHHh
Q 014864          308 TVGNIVTGDDMQ---TQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAG---NREQIQAVIE--ANIIGPLVALL  379 (417)
Q Consensus       308 ~L~~l~~~~~~~---~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~---~~~~~~~l~~--~~~i~~L~~~l  379 (417)
                      .||.+.......   ..++-+..-+..++.+|++. +..++-+|..++--++++   +++....+..  ..++..|-++.
T Consensus       223 LLgelLldr~N~~vm~~Yvs~~~nLkl~M~LLrd~-sk~Iq~EAFhVFKvFVANpnKp~~I~~IL~~Nr~kLl~fl~~f~  301 (330)
T d1upka_         223 LLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDK-SRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEFLSKFQ  301 (330)
T ss_dssp             HHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCS-CHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHTHHHHHHHHHHTT
T ss_pred             HHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHhcCc-hhhHHHHhhhHhhhhhcCCCCCHHHHHHHHHhHHHHHHHHHhCC
Confidence            999998655422   22333446688899999999 999999999999998873   3444444442  33455555544


Q ss_pred             cc--CCHHHHHHHHHHHHHh
Q 014864          380 EN--AEFDIKKEAAWAISNA  397 (417)
Q Consensus       380 ~~--~~~~v~~~a~~~L~nl  397 (417)
                      .+  .|.....+=...+..+
T Consensus       302 ~d~~~DeqF~~EK~~lI~~I  321 (330)
T d1upka_         302 NDRTEDEQFNDEKTYLVKQI  321 (330)
T ss_dssp             TTC-CCSHHHHHHHHHHHHH
T ss_pred             CCCCchhhHHHHHHHHHHHH
Confidence            33  2555554444444433


No 34 
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.61  E-value=0.0034  Score=52.14  Aligned_cols=201  Identities=13%  Similarity=0.104  Sum_probs=148.3

Q ss_pred             HHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCCCCCChh---hh---hchHHHHHHhhcCCChHHHHHHHHHHHH
Q 014864          196 LVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGKPQPPFD---QV---SPALPALAHLIHSNDDEVLTDACWALSY  269 (417)
Q Consensus       196 ~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~~~~~~~---~~---~~~l~~L~~ll~~~~~~v~~~a~~~l~~  269 (417)
                      .+...+.+..|+..| ..-+-+.++.++.+++++.+........   .+   ..++..|+....  ++++.-.+-..|..
T Consensus        64 e~~~~d~l~~Li~~L-~~L~fE~RKD~~~if~~llR~~~~~~~p~v~Yl~~~~eil~~L~~gye--~~eiAl~~G~mLRE  140 (330)
T d1upka_          64 ELYNSGLLSTLVADL-QLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYE--SPEIALNCGIMLRE  140 (330)
T ss_dssp             HHHHHSHHHHHHHTG-GGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGG--STTTHHHHHHHHHH
T ss_pred             HHHHhChHHHHHHhC-CCCCCchhhhHHHHHHHHhhcCCCCCCccHHHHHcCHHHHHHHHhhcC--CcchhhhhhHHHHH
Confidence            344556777788888 7778999999999999999976433222   11   234444554443  34443343344444


Q ss_pred             hccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHc---CChHHHHHhhcCCCchhHHH
Q 014864          270 LSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEY---QALPCLLNLLSGNYKKSIKK  346 (417)
Q Consensus       270 l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~---~~l~~L~~ll~~~~~~~v~~  346 (417)
                      +. ..+.....++....+..+.++++.++-++...|..++..+...+......++..   .++..+..+|.++ +.-+|+
T Consensus       141 ci-k~e~lak~iL~s~~f~~fF~yv~~~~FdiasDAf~TfkelLt~hk~~~aefl~~Nyd~Ff~~~~~LL~s~-NYVtrR  218 (330)
T d1upka_         141 CI-RHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSE-NYVTKR  218 (330)
T ss_dssp             HH-TSHHHHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHTTCS-SHHHHH
T ss_pred             HH-hhHHHHHHHHccHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhCHHHHHHHHHHhHHHHHHHHHHHhcCC-chHHHH
Confidence            44 445566778888889999999999999999999999999998888766666654   3556677888888 999999


Q ss_pred             HHHHHHHHHhc--CCHHHHHHHH-HCCCHHHHHHHhccCCHHHHHHHHHHHHHhhCCC
Q 014864          347 EACWTVSNITA--GNREQIQAVI-EANIIGPLVALLENAEFDIKKEAAWAISNATSGG  401 (417)
Q Consensus       347 ~a~~~L~nl~~--~~~~~~~~l~-~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl~~~~  401 (417)
                      .+...|+.+..  .+.......+ +..-+..++.+|++....++.+|..++.-++...
T Consensus       219 qSlKLLgelLldr~N~~vm~~Yvs~~~nLkl~M~LLrd~sk~Iq~EAFhVFKvFVANp  276 (330)
T d1upka_         219 QSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANP  276 (330)
T ss_dssp             HHHHHHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHhcCchhhHHHHhhhHhhhhhcCC
Confidence            99999999985  3343333333 4456888999999999999999999999999886


No 35 
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=97.41  E-value=0.00012  Score=59.57  Aligned_cols=176  Identities=15%  Similarity=0.056  Sum_probs=96.0

Q ss_pred             hhcCCCCHHHHHHHHHHHHHHhCCCchhHHHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCH
Q 014864          124 FLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGL  203 (417)
Q Consensus       124 lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i  203 (417)
                      +|.++. .+++..|+.                  .-.+..|..+++++++.|+..+++.|+                  .
T Consensus        50 ~l~~p~-~e~Ra~Aa~------------------~a~~~~L~~Ll~D~d~~VR~~AA~~Lp------------------~   92 (233)
T d1lrva_          50 YLADPF-WERRAIAVR------------------YSPVEALTPLIRDSDEVVRRAVAYRLP------------------R   92 (233)
T ss_dssp             GTTCSS-HHHHHHHHT------------------TSCGGGGGGGTTCSSHHHHHHHHTTSC------------------S
T ss_pred             HhcCCc-HHHHHHHHh------------------cCCHHHHHHHhcCCCHHHHHHHHHHcC------------------H
Confidence            566666 677766652                  134667778888999999988876542                  1


Q ss_pred             HHHHHHhcCCCchhHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhcCCChHHHHHHHHH-----HHHhccCCh-HH
Q 014864          204 VPLLAQLNGQPKLSMLRNATWTLSNFCRGKPQPPFDQVSPALPALAHLIHSNDDEVLTDACWA-----LSYLSDGTN-DK  277 (417)
Q Consensus       204 ~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~-----l~~l~~~~~-~~  277 (417)
                      ..+..++ .+++..++..++..+.                 .+.|..++.+++..|+..++..     |..+....+ +.
T Consensus        93 ~~L~~L~-~D~d~~VR~~aa~~l~-----------------~~~L~~Ll~D~d~~VR~~aa~~~~~~~L~~L~~D~d~~V  154 (233)
T d1lrva_          93 EQLSALM-FDEDREVRITVADRLP-----------------LEQLEQMAADRDYLVRAYVVQRIPPGRLFRFMRDEDRQV  154 (233)
T ss_dssp             GGGGGTT-TCSCHHHHHHHHHHSC-----------------TGGGGGGTTCSSHHHHHHHHHHSCGGGGGGTTTCSCHHH
T ss_pred             HHHHHHh-cCCChhHHHHHHhccC-----------------HHHHHHHhcCCCHHHHHHHHhccchhHHHHHhcCCCHHH
Confidence            2233334 5666666666654321                 1234455555666666555432     111111111 11


Q ss_pred             HHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhc
Q 014864          278 IQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITA  357 (417)
Q Consensus       278 ~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  357 (417)
                      ...+...-..+.|..+++++++.++..++..++                  .+.|..++.++ ++.||..++.       
T Consensus       155 R~~aA~~~~~~~L~~l~~D~d~~VR~~aa~~L~------------------~~~L~~l~~D~-d~~VR~aaae-------  208 (233)
T d1lrva_         155 RKLVAKRLPEESLGLMTQDPEPEVRRIVASRLR------------------GDDLLELLHDP-DWTVRLAAVE-------  208 (233)
T ss_dssp             HHHHHHHSCGGGGGGSTTCSSHHHHHHHHHHCC------------------GGGGGGGGGCS-SHHHHHHHHH-------
T ss_pred             HHHHHHhcCHHHHHHHccCCCHHHHHHHHHhcC------------------cHHHHHHHhCC-CHHHHHHHHH-------
Confidence            111111122344555566666666665554332                  23455566666 7777766542       


Q ss_pred             CCHHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHH
Q 014864          358 GNREQIQAVIEANIIGPLVALLENAEFDIKKEAAW  392 (417)
Q Consensus       358 ~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~  392 (417)
                                  .+.+.++..|.+++++||..|..
T Consensus       209 ------------~~~~~ll~~L~D~d~~VR~aA~~  231 (233)
T d1lrva_         209 ------------HASLEALRELDEPDPEVRLAIAG  231 (233)
T ss_dssp             ------------HSCHHHHHHCCCCCHHHHHHHHC
T ss_pred             ------------hccHHHHHHhCCCCHHHHHHHHH
Confidence                        12345677888899999988764


No 36 
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=97.03  E-value=0.00025  Score=57.61  Aligned_cols=157  Identities=17%  Similarity=0.137  Sum_probs=84.7

Q ss_pred             HHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHHHHhCCChhHHHHhhCCCCHHHHHHHHHHHH-----HhhCC-Cc
Q 014864          118 VPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLYSPSDDVREQAVWALG-----NIAGD-SP  191 (417)
Q Consensus       118 i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~-----nl~~~-~~  191 (417)
                      +..|..++++++ +.++..|++.|.                  .+.|..++.+++..|+..++..+.     .+..+ +.
T Consensus        68 ~~~L~~Ll~D~d-~~VR~~AA~~Lp------------------~~~L~~L~~D~d~~VR~~aa~~l~~~~L~~Ll~D~d~  128 (233)
T d1lrva_          68 VEALTPLIRDSD-EVVRRAVAYRLP------------------REQLSALMFDEDREVRITVADRLPLEQLEQMAADRDY  128 (233)
T ss_dssp             GGGGGGGTTCSS-HHHHHHHHTTSC------------------SGGGGGTTTCSCHHHHHHHHHHSCTGGGGGGTTCSSH
T ss_pred             HHHHHHHhcCCC-HHHHHHHHHHcC------------------HHHHHHHhcCCChhHHHHHHhccCHHHHHHHhcCCCH
Confidence            455667777777 788888775431                  233455555666666655544321     11111 11


Q ss_pred             hHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhc
Q 014864          192 RCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGKPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLS  271 (417)
Q Consensus       192 ~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~  271 (417)
                      ..|...........|..++ .++++.++..++..+                 ..+.|..+++++++.|+..++..+    
T Consensus       129 ~VR~~aa~~~~~~~L~~L~-~D~d~~VR~~aA~~~-----------------~~~~L~~l~~D~d~~VR~~aa~~L----  186 (233)
T d1lrva_         129 LVRAYVVQRIPPGRLFRFM-RDEDRQVRKLVAKRL-----------------PEESLGLMTQDPEPEVRRIVASRL----  186 (233)
T ss_dssp             HHHHHHHHHSCGGGGGGTT-TCSCHHHHHHHHHHS-----------------CGGGGGGSTTCSSHHHHHHHHHHC----
T ss_pred             HHHHHHHhccchhHHHHHh-cCCCHHHHHHHHHhc-----------------CHHHHHHHccCCCHHHHHHHHHhc----
Confidence            1111111111222233333 455555555444311                 123455666666777776665433    


Q ss_pred             cCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHH
Q 014864          272 DGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEAC  349 (417)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~  349 (417)
                                    ..+.|..++.++++.|+..+...+                   .+.++..|.++ ++.||..+.
T Consensus       187 --------------~~~~L~~l~~D~d~~VR~aaae~~-------------------~~~ll~~L~D~-d~~VR~aA~  230 (233)
T d1lrva_         187 --------------RGDDLLELLHDPDWTVRLAAVEHA-------------------SLEALRELDEP-DPEVRLAIA  230 (233)
T ss_dssp             --------------CGGGGGGGGGCSSHHHHHHHHHHS-------------------CHHHHHHCCCC-CHHHHHHHH
T ss_pred             --------------CcHHHHHHHhCCCHHHHHHHHHhc-------------------cHHHHHHhCCC-CHHHHHHHH
Confidence                          135677888889999988775321                   23456777877 999998875


No 37 
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=96.82  E-value=0.068  Score=45.51  Aligned_cols=200  Identities=14%  Similarity=0.109  Sum_probs=122.8

Q ss_pred             CHHHHHHhhcCCC-CHHHHHHHHHHHHHHhCCCchhHHHHHhCCChhHHHHhhCC----CCHHHHHHHHHHHHHhhC---
Q 014864          117 VVPRFVEFLLRED-YPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLYS----PSDDVREQAVWALGNIAG---  188 (417)
Q Consensus       117 ~i~~Lv~lL~~~~-~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~----~~~~i~~~a~~~L~nl~~---  188 (417)
                      .+..+.+++.+.. .+......++.+......+.         ..+..+..++.+    .++.++..++.++|+++.   
T Consensus        89 a~~~i~~~I~~~~ls~~ea~~~l~~l~~~~~Pt~---------~~l~~~~~l~~~~~~~~~~~l~~~a~La~gslv~~~c  159 (336)
T d1lsha1          89 ALLFLKRTLASEQLTSAEATQIVASTLSNQQATR---------ESLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYC  159 (336)
T ss_dssp             HHHHHHHHHHTTCSCHHHHHHHHHHHHHTCCCCH---------HHHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCH---------HHHHHHHHHHcCcccccchhHHHHHHHHHHHHHHHHh
Confidence            4555677776654 12222233333333222211         234556666664    578888999999988862   


Q ss_pred             -CCchHHHHHHhcCCHHHHHHHhc---CCCchhHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhcCC-------Ch
Q 014864          189 -DSPRCRDLVLSQGGLVPLLAQLN---GQPKLSMLRNATWTLSNFCRGKPQPPFDQVSPALPALAHLIHSN-------DD  257 (417)
Q Consensus       189 -~~~~~~~~~~~~g~i~~L~~ll~---~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~l~~L~~ll~~~-------~~  257 (417)
                       ..+.+..     ..++.+...+.   ...+.+-...++.+|+|+..          ...++.+..++...       +.
T Consensus       160 ~~~~~~~~-----~~~~~l~~~l~~~~~~~~~~~~~~~LkaLGN~g~----------p~~i~~l~~~l~~~~~~~~~~~~  224 (336)
T d1lsha1         160 ANTVSCPD-----ELLQPLHDLLSQSSDRAKEEEIVLALKALGNAGQ----------PNSIKKIQRFLPGQGKSLDEYST  224 (336)
T ss_dssp             TTCSSCCG-----GGTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC----------GGGHHHHHTTSTTSSSCCCCSCH
T ss_pred             cCCCCCcH-----HHHHHHHHHHHHhhcccchHHHHHHHHHHhccCC----------HhHHHHHHHHhcccccccccccH
Confidence             2222222     12344444432   34566667778899999864          24577788877532       46


Q ss_pred             HHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCC--CChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHh
Q 014864          258 EVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMH--PSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNL  335 (417)
Q Consensus       258 ~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~--~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~l  335 (417)
                      .++..|++++.+++...+..++        +.+.+++.+  .++++|..|+..|-..  .+. .       ..+..+...
T Consensus       225 ~vR~aAi~Alr~~~~~~p~~v~--------~~l~~i~~n~~e~~EvRiaA~~~lm~t--~P~-~-------~~l~~i~~~  286 (336)
T d1lsha1         225 RVQAEAIMALRNIAKRDPRKVQ--------EIVLPIFLNVAIKSELRIRSCIVFFES--KPS-V-------ALVSMVAVR  286 (336)
T ss_dssp             HHHHHHHHTTTTGGGTCHHHHH--------HHHHHHHHCTTSCHHHHHHHHHHHHHT--CCC-H-------HHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCcHHHH--------HHHHHHHcCCCCChHHHHHHHHHHHhc--CCC-H-------HHHHHHHHH
Confidence            7999999999999887654433        344555443  3578898888877442  222 1       124567777


Q ss_pred             hcCCCchhHHHHHHHHHHHHhcC
Q 014864          336 LSGNYKKSIKKEACWTVSNITAG  358 (417)
Q Consensus       336 l~~~~~~~v~~~a~~~L~nl~~~  358 (417)
                      +..+.+..|.......|.+++..
T Consensus       287 l~~E~~~QV~sfv~S~l~~la~s  309 (336)
T d1lsha1         287 LRREPNLQVASFVYSQMRSLSRS  309 (336)
T ss_dssp             HTTCSCHHHHHHHHHHHHHHTTC
T ss_pred             HHhCcHHHHHHHHHHHHHHHHhC
Confidence            77665888888888889999873


No 38 
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=96.68  E-value=0.15  Score=43.30  Aligned_cols=207  Identities=14%  Similarity=0.130  Sum_probs=125.6

Q ss_pred             ChhHHHHhhCCC--CHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCC---CchhHHHHHHHHHhhhhc---
Q 014864          160 AVPIFVKLLYSP--SDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQ---PKLSMLRNATWTLSNFCR---  231 (417)
Q Consensus       160 ~i~~L~~ll~~~--~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~---~~~~~~~~a~~~l~~l~~---  231 (417)
                      ++..+.+++.+.  ........++.+.....-++   +      .+..+..++...   .++.+...+.-+++++..   
T Consensus        89 a~~~i~~~I~~~~ls~~ea~~~l~~l~~~~~Pt~---~------~l~~~~~l~~~~~~~~~~~l~~~a~La~gslv~~~c  159 (336)
T d1lsha1          89 ALLFLKRTLASEQLTSAEATQIVASTLSNQQATR---E------SLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYC  159 (336)
T ss_dssp             HHHHHHHHHHTTCSCHHHHHHHHHHHHHTCCCCH---H------HHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHhccCCCCH---H------HHHHHHHHHcCcccccchhHHHHHHHHHHHHHHHHh
Confidence            445566666543  23333344445544332222   2      345566666321   356666666666665543   


Q ss_pred             -CCCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCC-------CChhhHH
Q 014864          232 -GKPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMH-------PSPSVLI  303 (417)
Q Consensus       232 -~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~-------~~~~v~~  303 (417)
                       ..+.........+...+.+.....+.+-..-++.+|+|+.  .+         +.++.|.+++..       .+..+|.
T Consensus       160 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~LkaLGN~g--~p---------~~i~~l~~~l~~~~~~~~~~~~~vR~  228 (336)
T d1lsha1         160 ANTVSCPDELLQPLHDLLSQSSDRAKEEEIVLALKALGNAG--QP---------NSIKKIQRFLPGQGKSLDEYSTRVQA  228 (336)
T ss_dssp             TTCSSCCGGGTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT--CG---------GGHHHHHTTSTTSSSCCCCSCHHHHH
T ss_pred             cCCCCCcHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccC--CH---------hHHHHHHHHhcccccccccccHHHHH
Confidence             4344444444455555666666677777777889999985  22         246777777753       2467999


Q ss_pred             HHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCC-CchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhc-c
Q 014864          304 PALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGN-YKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLE-N  381 (417)
Q Consensus       304 ~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~-~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~-~  381 (417)
                      .|++++.++....+....        +.+..++.+. .++++|..|+..|... .-+..         .+..+...+. +
T Consensus       229 aAi~Alr~~~~~~p~~v~--------~~l~~i~~n~~e~~EvRiaA~~~lm~t-~P~~~---------~l~~i~~~l~~E  290 (336)
T d1lsha1         229 EAIMALRNIAKRDPRKVQ--------EIVLPIFLNVAIKSELRIRSCIVFFES-KPSVA---------LVSMVAVRLRRE  290 (336)
T ss_dssp             HHHHTTTTGGGTCHHHHH--------HHHHHHHHCTTSCHHHHHHHHHHHHHT-CCCHH---------HHHHHHHHHTTC
T ss_pred             HHHHHHHHhhhcCcHHHH--------HHHHHHHcCCCCChHHHHHHHHHHHhc-CCCHH---------HHHHHHHHHHhC
Confidence            999999999887664433        3344554333 3789999998888664 21222         3445555554 4


Q ss_pred             CCHHHHHHHHHHHHHhhCCCCHH
Q 014864          382 AEFDIKKEAAWAISNATSGGTHE  404 (417)
Q Consensus       382 ~~~~v~~~a~~~L~nl~~~~~~~  404 (417)
                      ++..|.......|.+++...+++
T Consensus       291 ~~~QV~sfv~S~l~~la~s~~P~  313 (336)
T d1lsha1         291 PNLQVASFVYSQMRSLSRSSNPE  313 (336)
T ss_dssp             SCHHHHHHHHHHHHHHTTCCSGG
T ss_pred             cHHHHHHHHHHHHHHHHhCCCcc
Confidence            67889999999999998876553


No 39 
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.47  E-value=0.024  Score=55.93  Aligned_cols=306  Identities=8%  Similarity=0.027  Sum_probs=154.1

Q ss_pred             CChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchh-----------HH
Q 014864           85 NDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEH-----------TK  153 (417)
Q Consensus        85 ~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~-----------~~  153 (417)
                      ..+.++..+++.+........++   .  -..+++.++.+|.+++ +.++..|++++..++......           ..
T Consensus       470 ~~~~lr~~~~~~i~~~~~~~~~~---~--~~~~~~~l~~~L~~~~-~~V~~~a~~al~~~~~~~~~~~~~~~~~~~~~l~  543 (959)
T d1wa5c_         470 PHIILRVDAIKYIYTFRNQLTKA---Q--LIELMPILATFLQTDE-YVVYTYAAITIEKILTIRESNTSPAFIFHKEDIS  543 (959)
T ss_dssp             SCHHHHHHHHHHHHHTGGGSCHH---H--HHHHHHHHHHHTTCSC-HHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTT
T ss_pred             chHHHHHHHHHHHHHHHhhccHH---H--HHHHHHHHHHHhCCCc-hhHHHHHHHHHHHHHHhhcccccchhhccHHHHH
Confidence            34667888888888775432111   1  1346899999999888 899999999999998632211           00


Q ss_pred             HHHhCCChhHHHHhhCCCC---HHH--HHHHHHHHHHhhC---C-CchHHHHHHhcCCHHHHHHHh----cCCCchhHHH
Q 014864          154 VVIDHGAVPIFVKLLYSPS---DDV--REQAVWALGNIAG---D-SPRCRDLVLSQGGLVPLLAQL----NGQPKLSMLR  220 (417)
Q Consensus       154 ~i~~~g~i~~L~~ll~~~~---~~i--~~~a~~~L~nl~~---~-~~~~~~~~~~~g~i~~L~~ll----~~~~~~~~~~  220 (417)
                      ..+. ..+..++..+....   ...  .+.++.++..+..   + -..+...     .++.+...+    ....++....
T Consensus       544 p~l~-~ll~~L~~~l~~~~~~~~~~~~~~~ll~~l~~ii~~~~~~~~~~~~~-----i~~~l~~~~~~~~~~~~~~~~~~  617 (959)
T d1wa5c_         544 NSTE-ILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQ-----LLAQFIEIVTIMAKNPSNPRFTH  617 (959)
T ss_dssp             TTHH-HHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGGGHHH-----HHHHHHHHHHHHTTSCCCHHHHH
T ss_pred             hhHH-HHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHhcCccchHHHH
Confidence            0111 23344455443311   111  2335555555441   1 1112222     223333332    2334566777


Q ss_pred             HHHHHHhhhhcCC-CCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCCh
Q 014864          221 NATWTLSNFCRGK-PQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSP  299 (417)
Q Consensus       221 ~a~~~l~~l~~~~-~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~  299 (417)
                      .+..++..+.... +.........++|.+...+..+..+....++..+..+..........+  ...++.++........
T Consensus       618 ~~~e~l~~l~~~~~~~~~~~l~~~l~p~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~l~~~l~~~~~~~~~  695 (959)
T d1wa5c_         618 YTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFVVEQSATIPESI--KPLAQPLLAPNVWELK  695 (959)
T ss_dssp             HHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHHHHCSSCCTTT--GGGHHHHTSGGGGCCT
T ss_pred             HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhCCCccHHH--HHHHHHHhhHHHHHHh
Confidence            7778888877653 222223336677888888876666656666655554432211100000  0122333322222222


Q ss_pred             hhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCC-HHHHHHHHHCCCHHHHHHH
Q 014864          300 SVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGN-REQIQAVIEANIIGPLVAL  378 (417)
Q Consensus       300 ~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~-~~~~~~l~~~~~i~~L~~~  378 (417)
                      .....+...+.++....+.....  ..+.+..+..++...   .....+...+..+.... .+.....+. .++..++..
T Consensus       696 ~~~~~~~~~l~~~~~~~~~~~~~--~~~~l~~~~~~l~~~---~~~~~~~~ll~~ii~~~~~~~~~~~l~-~i~~~~~~~  769 (959)
T d1wa5c_         696 GNIPAVTRLLKSFIKTDSSIFPD--LVPVLGIFQRLIASK---AYEVHGFDLLEHIMLLIDMNRLRPYIK-QIAVLLLQR  769 (959)
T ss_dssp             TTHHHHHHHHHHHHHHHGGGCSC--SHHHHHHHHHHHTCT---TTHHHHHHHHHHHHHHSCHHHHGGGHH-HHHHHHHHG
T ss_pred             hhHHHHHHHHHHHHHhCHHhhcc--hHHHHHHHHHHHCCC---cchHHHHHHHHHHHHHCchhhhHhHHH-HHHHHHHHH
Confidence            33444445554444322211100  012344455556544   23456677777766432 222222222 345555666


Q ss_pred             hccC-CHHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 014864          379 LENA-EFDIKKEAAWAISNATSGGTHEQIKYEH  410 (417)
Q Consensus       379 l~~~-~~~v~~~a~~~L~nl~~~~~~~~~~~l~  410 (417)
                      +... .+.+....++.++.++...+++....++
T Consensus       770 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  802 (959)
T d1wa5c_         770 LQNSKTERYVKKLTVFFGLISNKLGSDFLIHFI  802 (959)
T ss_dssp             GGSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             HHhcccHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence            6543 5777888888888887654555444444


No 40 
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.24  E-value=0.025  Score=55.78  Aligned_cols=260  Identities=9%  Similarity=0.061  Sum_probs=133.1

Q ss_pred             HHHHHHHHHHHHhCCCchhHHHHHhCCChhHHHHhhC--CCCHHHHHHHHHHHHHhhCCCchHHHHH--------HhcCC
Q 014864          133 LQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLY--SPSDDVREQAVWALGNIAGDSPRCRDLV--------LSQGG  202 (417)
Q Consensus       133 ~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~--~~~~~i~~~a~~~L~nl~~~~~~~~~~~--------~~~g~  202 (417)
                      .+..|...+..++...++.....+-.-+...+.....  +.+...++.++.+++.++..........        +..-.
T Consensus       377 ~r~~a~~ll~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l  456 (959)
T d1wa5c_         377 RRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFF  456 (959)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHBSSCCBTTBCCCBCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhccccchHHHHHHHHHHHHhhccCCccchHHHHHHHHHHHHHHhhhhhhhhhhhcccchhhHHHHH
Confidence            4555666666666543332221111111111222222  2567788889988888864321100000        00001


Q ss_pred             HHHHHHHhc--CCCchhHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChH----
Q 014864          203 LVPLLAQLN--GQPKLSMLRNATWTLSNFCRGKPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTND----  276 (417)
Q Consensus       203 i~~L~~ll~--~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~----  276 (417)
                      ...+...+.  ....+.++..++|+++..+...+   ......+++.++.+|.+++..++..|++++..++.....    
T Consensus       457 ~~~v~~~l~~~~~~~~~lr~~~~~~i~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~V~~~a~~al~~~~~~~~~~~~~  533 (959)
T d1wa5c_         457 TKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLT---KAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSP  533 (959)
T ss_dssp             HHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGSC---HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSC
T ss_pred             HHHHHHHHccCCCchHHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHHHhhcccccc
Confidence            112222231  33456788899999999987532   334567899999999999999999999999998753221    


Q ss_pred             -------HHHHHHHcCChHHHHhhcCCCCh-----hhHHHHHHHHHHhhcCCh----HHHHHHHHcCChHHHHHhhcCCC
Q 014864          277 -------KIQAVIEAGVFPRLAEFLMHPSP-----SVLIPALRTVGNIVTGDD----MQTQCVIEYQALPCLLNLLSGNY  340 (417)
Q Consensus       277 -------~~~~~~~~~~~~~L~~~l~~~~~-----~v~~~a~~~L~~l~~~~~----~~~~~~~~~~~l~~L~~ll~~~~  340 (417)
                             .....+. .++..++..+.....     .....++.+++.+.....    .....++ ..+.+.+....+++.
T Consensus       534 ~~~~~~~~l~p~l~-~ll~~L~~~l~~~~~~~~~~~~~~~ll~~l~~ii~~~~~~~~~~~~~i~-~~l~~~~~~~~~~~~  611 (959)
T d1wa5c_         534 AFIFHKEDISNSTE-ILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLL-AQFIEIVTIMAKNPS  611 (959)
T ss_dssp             CBSSCGGGTTTTHH-HHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGGGHHHHH-HHHHHHHHHHTTSCC
T ss_pred             hhhccHHHHHhhHH-HHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCcc
Confidence                   0000111 123444444433221     122345666665543221    1222111 122223333334443


Q ss_pred             chhHHHHHHHHHHHHhc-CCHHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHHHHhh
Q 014864          341 KKSIKKEACWTVSNITA-GNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNAT  398 (417)
Q Consensus       341 ~~~v~~~a~~~L~nl~~-~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl~  398 (417)
                      ++.....+..+++.+.. .+++....+. ..++|.+...+.....+....+...+..+.
T Consensus       612 ~~~~~~~~~e~l~~l~~~~~~~~~~~l~-~~l~p~i~~~~~~~~~~~~~~~~~l~~~~~  669 (959)
T d1wa5c_         612 NPRFTHYTFESIGAILNYTQRQNLPLLV-DSMMPTFLTVFSEDIQEFIPYVFQIIAFVV  669 (959)
T ss_dssp             CHHHHHHHHHHHHHHHHTSCGGGHHHHH-HHHHHHHHHHHHTTCTTTHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHhcCchhHHHHH-HHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence            56667777777887764 3343333332 356777777777665555555555554443


No 41 
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.76  E-value=0.39  Score=40.67  Aligned_cols=159  Identities=10%  Similarity=0.082  Sum_probs=104.1

Q ss_pred             HHHHhhhcCCC-hHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcC---------C-CCHHHHHHHHHHHHHH
Q 014864           76 PVMVAGVWSND-SGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLR---------E-DYPQLQFEAAWALTNI  144 (417)
Q Consensus        76 ~~l~~~l~s~~-~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~---------~-~~~~~~~~a~~~L~~l  144 (417)
                      ...+..|+++- .......+..|+--+...+..-++.+ ..+++..|+.+|..         . .+...+.+++.||..+
T Consensus         5 ~~yv~~l~~~~~~~~~~~~L~sL~v~Lrt~~~sWv~~F-~~~G~~~L~~~L~~l~~~~~~~~~~~d~~~e~e~l~CLkal   83 (343)
T d2bnxa1           5 MMYIQELRSGLRDMHLLSCLESLRVSLNNNPVSWVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAF   83 (343)
T ss_dssp             HHHHHHHTSCCCHHHHHHHHHHHHHHHHHSCHHHHHHH-HHHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCccHHHHHHHHHHHHHhcCCchHHHHH-HhccHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHH
Confidence            34566666543 23334456666655555322224445 45567777777631         1 1256889999999999


Q ss_pred             hCCCchhHHHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCC--chHHHH----------HHhcCCHHHHHHHhcC
Q 014864          145 ASGTSEHTKVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDS--PRCRDL----------VLSQGGLVPLLAQLNG  212 (417)
Q Consensus       145 ~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~--~~~~~~----------~~~~g~i~~L~~ll~~  212 (417)
                      ..........+-..+++..++..+.+++..++..|+.+|..+|...  +.....          .-+.+-..+++..+..
T Consensus        84 mn~~~G~~~vl~~~~~i~~l~~~L~s~~~~tr~~a~elL~~lc~~~~~~~g~~~vL~Al~~~~~~~e~~RF~~lv~~l~~  163 (343)
T d2bnxa1          84 MNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKS  163 (343)
T ss_dssp             TSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTST
T ss_pred             hccHHHHHHHHcChHHHHHHHHccCCCchHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHhcCCCcHHHHHHHHhc
Confidence            9864444444555688999999999999999999999999998432  222222          2244556788888866


Q ss_pred             CCchhHHHHHHHHHhhhhcCCCC
Q 014864          213 QPKLSMLRNATWTLSNFCRGKPQ  235 (417)
Q Consensus       213 ~~~~~~~~~a~~~l~~l~~~~~~  235 (417)
                      ..+.+....++..+-.+....+.
T Consensus       164 ~~~~ey~~a~m~lIN~li~~~~d  186 (343)
T d2bnxa1         164 GTSIALKVGCLQLINALITPAEE  186 (343)
T ss_dssp             TSCHHHHHHHHHHHHHHHTTCSC
T ss_pred             cccHHHHHHHHHHHHHHHcCccc
Confidence            66778888888777777776443


No 42 
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.51  E-value=1.8  Score=36.36  Aligned_cols=167  Identities=12%  Similarity=0.132  Sum_probs=103.2

Q ss_pred             CCchhHHHHHhCCChhHHHHhhCC-----------CCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCc
Q 014864          147 GTSEHTKVVIDHGAVPIFVKLLYS-----------PSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPK  215 (417)
Q Consensus       147 ~~~~~~~~i~~~g~i~~L~~ll~~-----------~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~  215 (417)
                      .+..+.+.+ ..+++..|+.+|..           .+......++.||..+.....+....+-..+++..+...+ .++.
T Consensus        34 ~~~sWv~~F-~~~G~~~L~~~L~~l~~~~~~~~~~~d~~~e~e~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L-~s~~  111 (343)
T d2bnxa1          34 NPVSWVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAM-DPAV  111 (343)
T ss_dssp             SCHHHHHHH-HHHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTC-CTTS
T ss_pred             CCchHHHHH-HhccHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHhccHHHHHHHHcChHHHHHHHHcc-CCCc
Confidence            334555555 34566667666621           2356788899999999888777777777777888888888 7888


Q ss_pred             hhHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcC
Q 014864          216 LSMLRNATWTLSNFCRGKPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLM  295 (417)
Q Consensus       216 ~~~~~~a~~~l~~l~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~  295 (417)
                      +.++..++..|..+|.......      +.               ..++.++.+..        ..-+.+-+..++..+.
T Consensus       112 ~~tr~~a~elL~~lc~~~~~~~------g~---------------~~vL~Al~~~~--------~~~e~~RF~~lv~~l~  162 (343)
T d2bnxa1         112 PNMMIDAAKLLSALCILPQPED------MN---------------ERVLEAMTERA--------EMDEVERFQPLLDGLK  162 (343)
T ss_dssp             HHHHHHHHHHHHHHHTCCSSTT------HH---------------HHHHHHHHHHH--------HHHTSCTTHHHHHHTS
T ss_pred             hHHHHHHHHHHHHHHhccCCCc------hH---------------HHHHHHHHHHH--------HhcCCCcHHHHHHHHh
Confidence            9999999999999987532111      11               12222222211        1223345667777776


Q ss_pred             CC-ChhhHHHHHHHHHHhhcCChH------HHHHHHHcCChHHHHHhhcCCCchhHH
Q 014864          296 HP-SPSVLIPALRTVGNIVTGDDM------QTQCVIEYQALPCLLNLLSGNYKKSIK  345 (417)
Q Consensus       296 ~~-~~~v~~~a~~~L~~l~~~~~~------~~~~~~~~~~l~~L~~ll~~~~~~~v~  345 (417)
                      .. +.+.+..++..|-.++.+.+.      .+..+...|+.+.+-. +....++.+.
T Consensus       163 ~~~~~ey~~a~m~lIN~li~~~~dl~~R~~lR~E~~~~Gl~~il~~-l~~~~~~~L~  218 (343)
T d2bnxa1         163 SGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQVLQE-LREIENEDMK  218 (343)
T ss_dssp             TTSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTHHHHHHH-HTTCCCHHHH
T ss_pred             ccccHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHCChHHHHHH-HHccCChHHH
Confidence            55 467777788778777776653      2333445666655444 4443254443


No 43 
>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.59  E-value=0.6  Score=39.20  Aligned_cols=193  Identities=13%  Similarity=0.047  Sum_probs=110.9

Q ss_pred             HHHHhCCChhHHHHhhCCCCHHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcC
Q 014864          153 KVVIDHGAVPIFVKLLYSPSDDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRG  232 (417)
Q Consensus       153 ~~i~~~g~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~  232 (417)
                      ...++...+..|+.++.++|+.-|+.....|..+-+.-...|..+... +...+.+.+.......-...+++.++.+..+
T Consensus       127 ~~~id~~Fi~~Ll~lf~S~D~rER~~lk~~l~~iy~kf~~~R~~Ir~~-i~~if~~fi~e~~~~~gI~elLeil~sii~g  205 (343)
T d2jaka1         127 KKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQ-INNIFYRFIYETEHHNGIAELLEILGSIING  205 (343)
T ss_dssp             TTTSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHH-HHHHHHHHHTSSCCCSCHHHHHHHHHHHHHT
T ss_pred             HhhCCHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhhhhHHHHHHHH-HHHHHHHHhhcCCCCccHHHHHHHHHHHHHh
Confidence            334444567889999999999999999999999987777677765543 5566777775555666677788888888877


Q ss_pred             CCCC-ChhhhhchHHHHHHhhcCCC-hHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHH
Q 014864          233 KPQP-PFDQVSPALPALAHLIHSND-DEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVG  310 (417)
Q Consensus       233 ~~~~-~~~~~~~~l~~L~~ll~~~~-~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~  310 (417)
                      -..+ ..+...-....++.+..... .........++......++.....     ++..++..=-..+..-...-+.-|.
T Consensus       206 f~~plkeeh~~f~~~vllPLhk~~~~~~y~~qL~~~v~~f~~kDp~l~~~-----~i~~llk~WP~t~~~Kev~FL~el~  280 (343)
T d2jaka1         206 FALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEP-----VVMALLKYWPKTHSPKEVMFLNELE  280 (343)
T ss_dssp             CCSSCCHHHHHHHHHTTGGGGTSGGGGGTHHHHHHHHHHHHHHCGGGHHH-----HHHHHHHSSCSSCCTTHHHHHHHHH
T ss_pred             ccCCchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHhcCchhHHH-----HHHHHHHhCCCCCchHHHHHHHHHH
Confidence            5433 23333344455666655443 222233333333333333322221     2222333322233344445555666


Q ss_pred             HhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHH
Q 014864          311 NIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTV  352 (417)
Q Consensus       311 ~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L  352 (417)
                      .+....+...-.-+...+...+...+.++ +..|-+.|....
T Consensus       281 ~il~~~~~~~f~~~~~~lf~~la~ci~S~-h~qVAErAl~~w  321 (343)
T d2jaka1         281 EILDVIEPSEFVKIMEPLFRQLAKCVSSP-HFQVAERALYYW  321 (343)
T ss_dssp             HHHHTCCHHHHHHHHHHHHHHHHHHHTCS-SHHHHHHHHGGG
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHH
Confidence            66544432221122234566677777777 777777766543


No 44 
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.87  E-value=0.98  Score=32.61  Aligned_cols=75  Identities=8%  Similarity=-0.002  Sum_probs=57.6

Q ss_pred             cCHHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCC-----CCHHHHHHHHHHHHHHhCC
Q 014864           73 ENLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLRE-----DYPQLQFEAAWALTNIASG  147 (417)
Q Consensus        73 ~~l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~-----~~~~~~~~a~~~L~~l~~~  147 (417)
                      +++..+.+.|.+.++..+..|+..+..++.........++.+.+++..|+.+++..     .+..++..++..+...+..
T Consensus        45 ~a~r~l~krl~~~~~~~~l~aL~LLe~~vkNCG~~f~~evas~~Fl~~L~kli~~k~~~~~~~~~Vk~kil~li~~W~~~  124 (145)
T d1ujka_          45 LATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVG  124 (145)
T ss_dssp             HHHHHHHHHHTCSSHHHHHHHHHHHHHHHTSCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHH
Confidence            45677888888999999999999998887654445556677888999999998631     2368888888888776653


No 45 
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=83.50  E-value=0.82  Score=33.06  Aligned_cols=74  Identities=12%  Similarity=0.130  Sum_probs=59.0

Q ss_pred             ChhHHHHhhCCCCHHHHHHHHHHHHHhhCC-CchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCC
Q 014864          160 AVPIFVKLLYSPSDDVREQAVWALGNIAGD-SPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGK  233 (417)
Q Consensus       160 ~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~-~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~  233 (417)
                      ++..|.+-+.++++.++..|+.+|-.+..+ ++.+...+...+.+..|.+++...++..++..++..+-..+...
T Consensus        43 a~ral~krl~~~n~~v~l~aL~LLd~~vkNcG~~f~~~i~s~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~~f  117 (145)
T d1dvpa1          43 AFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAYAF  117 (145)
T ss_dssp             HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHccchHHHHHHhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHh
Confidence            566677788889999999999999888865 35577778788888888888866667888888888887766643


No 46 
>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.79  E-value=0.95  Score=37.94  Aligned_cols=180  Identities=14%  Similarity=0.092  Sum_probs=84.0

Q ss_pred             HHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCc----h
Q 014864           75 LPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTS----E  150 (417)
Q Consensus        75 l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~----~  150 (417)
                      +..++..+.|+|+..|......+..+...  -.....++...+...+.+++.......--.+.+++++.+..|-.    +
T Consensus       135 i~~Ll~lf~S~D~rER~~lk~~l~~iy~k--f~~~R~~Ir~~i~~if~~fi~e~~~~~gI~elLeil~sii~gf~~plke  212 (343)
T d2jaka1         135 VLQLLELFDSEDPRERDFLKTTLHRIYGK--FLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKE  212 (343)
T ss_dssp             HHHHHHHTTCSCHHHHHHHHHHHHHHHHH--CGGGHHHHHHHHHHHHHHHHTSSCCCSCHHHHHHHHHHHHHTCCSSCCH
T ss_pred             HHHHHHhcCCCChHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHhccCCchH
Confidence            35556666777777777777777666543  23344455555566666766544323344566666666666431    1


Q ss_pred             hHHHHHhCCChhHHHHhhCCCC-HHHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcCCCchhHHHHHHHHHhhh
Q 014864          151 HTKVVIDHGAVPIFVKLLYSPS-DDVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNGQPKLSMLRNATWTLSNF  229 (417)
Q Consensus       151 ~~~~i~~~g~i~~L~~ll~~~~-~~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l  229 (417)
                      .-..+..    ..|+.+.+.+. .....+-..++..+...++.....     .+..+++.- ..++..-...-+.-+..+
T Consensus       213 eh~~f~~----~vllPLhk~~~~~~y~~qL~~~v~~f~~kDp~l~~~-----~i~~llk~W-P~t~~~Kev~FL~el~~i  282 (343)
T d2jaka1         213 EHKIFLL----KVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEP-----VVMALLKYW-PKTHSPKEVMFLNELEEI  282 (343)
T ss_dssp             HHHHHHH----HTTGGGGTSGGGGGTHHHHHHHHHHHHHHCGGGHHH-----HHHHHHHSS-CSSCCTTHHHHHHHHHHH
T ss_pred             HHHHHHH----HHHHHhccCcchHHHHHHHHHHHHHHHhcCchhHHH-----HHHHHHHhC-CCCCchHHHHHHHHHHHH
Confidence            1111221    22222333321 112223333444444333332222     122333333 222322223333333333


Q ss_pred             hcCCCCCCh-hhhhchHHHHHHhhcCCChHHHHHHHHH
Q 014864          230 CRGKPQPPF-DQVSPALPALAHLIHSNDDEVLTDACWA  266 (417)
Q Consensus       230 ~~~~~~~~~-~~~~~~l~~L~~ll~~~~~~v~~~a~~~  266 (417)
                      ...-+...+ ......+..+..++.+++-.|.+.|+..
T Consensus       283 l~~~~~~~f~~~~~~lf~~la~ci~S~h~qVAErAl~~  320 (343)
T d2jaka1         283 LDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYY  320 (343)
T ss_dssp             HHTCCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHGG
T ss_pred             HHhCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence            333222222 2224566667777777887777776533


No 47 
>d2b6ca1 a.118.1.17 (A:3-215) Hypothetical protein EF3068 {Enterococcus faecalis [TaxId: 1351]}
Probab=82.50  E-value=8.6  Score=29.37  Aligned_cols=137  Identities=7%  Similarity=-0.064  Sum_probs=82.1

Q ss_pred             HhhcCCChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCC-ChhhHHHHHHHH-HHhhcCChHHHHHHHHcC
Q 014864          250 HLIHSNDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHP-SPSVLIPALRTV-GNIVTGDDMQTQCVIEYQ  327 (417)
Q Consensus       250 ~ll~~~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~-~~~v~~~a~~~L-~~l~~~~~~~~~~~~~~~  327 (417)
                      .+..++--+.+..++..+.......++.        .++.+..++.+. ++.+....+..+ +.+....+         .
T Consensus        57 ~L~~~~~~E~r~~a~~ll~~~~~~~~~~--------~l~~~~~~~~~~~~Wd~vD~~~~~i~~~~~~~~~---------~  119 (213)
T d2b6ca1          57 AYYQKTEREYQYVAIDLALQNVQRFSLE--------EVVAFKAYVPQKAWWDSVDAWRKFFGSWVALHLT---------E  119 (213)
T ss_dssp             HHHTSSSHHHHHHHHHHHHHTGGGCCHH--------HHHHGGGGTTTTCSHHHHHHHHHHHHHHHHHSGG---------G
T ss_pred             HHHcCchHHHHHHHHHHHHHHHhccCHH--------HHHHHHHHHccCccHHHHHHHHHHHHHHHHHhhh---------h
Confidence            4445555566666666666554333221        133344444443 466666655554 33443332         2


Q ss_pred             ChHHHHHhhcCCCchhHHHHHHHHHHHHhc-CCHHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHHHHhhCCCCHHHH
Q 014864          328 ALPCLLNLLSGNYKKSIKKEACWTVSNITA-GNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSGGTHEQI  406 (417)
Q Consensus       328 ~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~-~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl~~~~~~~~~  406 (417)
                      ..+.+..+..++ +.-+|+.|+.+...... ++.+.        ++..+..++.++++-|++...|+|..++.. +++.+
T Consensus       120 ~~~~l~~w~~s~-~~w~rR~aiv~~l~~~~~~~~~~--------~~~~~~~~~~d~e~~i~kAigW~Lre~~k~-~p~~v  189 (213)
T d2b6ca1         120 LPTIFALFYGAE-NFWNRRVALNLQLMLKEKTNQDL--------LKKAIIYDRTTEEFFIQKAIGWSLRQYSKT-NPQWV  189 (213)
T ss_dssp             HHHHHHHHTTCS-SHHHHHHHHHTTTTCGGGCCHHH--------HHHHHHHTTTCCCHHHHHHHHHHHHHHTTT-CHHHH
T ss_pred             HHHHHHHHHhCC-CHHHHHHHHHHHHHHHHcccHHH--------HHHHHHHhCCChHHHHHHHHHHHHHHHHHH-CHHHH
Confidence            245677888888 88888877665443332 33321        234455666788899999999999999876 77777


Q ss_pred             HHHHhcC
Q 014864          407 KYEHTFC  413 (417)
Q Consensus       407 ~~l~~~g  413 (417)
                      ..+++..
T Consensus       190 ~~fl~~~  196 (213)
T d2b6ca1         190 EELMKEL  196 (213)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHhC
Confidence            7777654


No 48 
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.20  E-value=3.5  Score=29.47  Aligned_cols=74  Identities=18%  Similarity=0.081  Sum_probs=57.6

Q ss_pred             ChhHHHHhhCCCCHHHHHHHHHHHHHhhCC-CchHHHHHHhcCCHHHHHHHhcC-----CCchhHHHHHHHHHhhhhcCC
Q 014864          160 AVPIFVKLLYSPSDDVREQAVWALGNIAGD-SPRCRDLVLSQGGLVPLLAQLNG-----QPKLSMLRNATWTLSNFCRGK  233 (417)
Q Consensus       160 ~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~-~~~~~~~~~~~g~i~~L~~ll~~-----~~~~~~~~~a~~~l~~l~~~~  233 (417)
                      ++..|.+-|.+.++.++..|+.+|-.+..+ ++.++..+...+++..|++++..     ..+..++..++..+..-+...
T Consensus        46 a~r~l~krl~~~~~~~~l~aL~LLe~~vkNCG~~f~~evas~~Fl~~L~kli~~k~~~~~~~~~Vk~kil~li~~W~~~f  125 (145)
T d1ujka_          46 ATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGL  125 (145)
T ss_dssp             HHHHHHHHHTCSSHHHHHHHHHHHHHHHTSCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHC
Confidence            455566677888999999999999888866 57888899999999999999953     245678888887776665543


No 49 
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=80.07  E-value=0.61  Score=33.77  Aligned_cols=74  Identities=12%  Similarity=0.061  Sum_probs=52.7

Q ss_pred             cCHHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhC
Q 014864           73 ENLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIAS  146 (417)
Q Consensus        73 ~~l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~  146 (417)
                      +++..+.+.|+++++.++..|+..+..++.........++...+++..|..++++..+..++..++..+...+.
T Consensus        42 ~a~ral~krl~~~n~~v~l~aL~LLd~~vkNcG~~f~~~i~s~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~  115 (145)
T d1dvpa1          42 NAFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAY  115 (145)
T ss_dssp             HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccchHHHHHHhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence            35677777888888889998888888777654233444555667788888887665446788888777776554


No 50 
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.05  E-value=1.7  Score=31.24  Aligned_cols=74  Identities=8%  Similarity=-0.045  Sum_probs=55.3

Q ss_pred             cCHHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCC-----CCHHHHHHHHHHHHHHhC
Q 014864           73 ENLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLRE-----DYPQLQFEAAWALTNIAS  146 (417)
Q Consensus        73 ~~l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~-----~~~~~~~~a~~~L~~l~~  146 (417)
                      +.+..+.+.|+++++..+..|+..+..++.........++....++..|+.+++..     .++.++..++..+...+.
T Consensus        38 ~a~ral~krl~~~n~~~~l~aL~LLe~~vkNcG~~fh~evask~Fl~~l~~li~~k~~~~~~~~~Vk~kil~li~~Wa~  116 (143)
T d1mhqa_          38 HAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTV  116 (143)
T ss_dssp             HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHH
Confidence            35677777888889999999998888887654345556677778888999988731     237888888888777665


No 51 
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.40  E-value=3  Score=29.76  Aligned_cols=74  Identities=14%  Similarity=-0.029  Sum_probs=56.6

Q ss_pred             ChhHHHHhhCCCCHHHHHHHHHHHHHhhCC-CchHHHHHHhcCCHHHHHHHhcC-----CCchhHHHHHHHHHhhhhcCC
Q 014864          160 AVPIFVKLLYSPSDDVREQAVWALGNIAGD-SPRCRDLVLSQGGLVPLLAQLNG-----QPKLSMLRNATWTLSNFCRGK  233 (417)
Q Consensus       160 ~i~~L~~ll~~~~~~i~~~a~~~L~nl~~~-~~~~~~~~~~~g~i~~L~~ll~~-----~~~~~~~~~a~~~l~~l~~~~  233 (417)
                      ++..|.+-+.++++.++..|+.+|-.+..+ ++.++..+....++..|++++..     ..+..++..++..+...+...
T Consensus        39 a~ral~krl~~~n~~~~l~aL~LLe~~vkNcG~~fh~evask~Fl~~l~~li~~k~~~~~~~~~Vk~kil~li~~Wa~~f  118 (143)
T d1mhqa_          39 APWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWF  118 (143)
T ss_dssp             HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHHHc
Confidence            455566677888999999999888888755 47788888888889999999852     346778888888777666653


No 52 
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.85  E-value=4.2  Score=29.31  Aligned_cols=75  Identities=7%  Similarity=-0.032  Sum_probs=52.4

Q ss_pred             cCHHHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCC-----CCHHHHHHHHHHHHHHhCC
Q 014864           73 ENLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLRE-----DYPQLQFEAAWALTNIASG  147 (417)
Q Consensus        73 ~~l~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~-----~~~~~~~~a~~~L~~l~~~  147 (417)
                      +++..+.+.|.+.++..+..|+..+..++.........++....++..|+.+++..     .+..++..++..+...+..
T Consensus        39 ~a~rai~krl~~~~~~~~l~aL~LLe~~vkNCG~~F~~evask~Fl~~l~kli~~k~~~~~~~~~Vk~kil~ll~~Wa~~  118 (151)
T d1juqa_          39 IAVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMA  118 (151)
T ss_dssp             HHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccHHHHHHHhhHHHHHHHHHHHcccCCCCcccHHHHHHHHHHHHHHHHH
Confidence            35667777788888888888888888776653334445566777888888888642     1367888777777776653


No 53 
>d2b6ca1 a.118.1.17 (A:3-215) Hypothetical protein EF3068 {Enterococcus faecalis [TaxId: 1351]}
Probab=48.65  E-value=49  Score=24.76  Aligned_cols=141  Identities=11%  Similarity=-0.027  Sum_probs=85.7

Q ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHHHHhCCChhHHHHhhCC-CCHHHHHHHHHHHHH-hhCCCchHHHHH
Q 014864          120 RFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLYS-PSDDVREQAVWALGN-IAGDSPRCRDLV  197 (417)
Q Consensus       120 ~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~-~~~~i~~~a~~~L~n-l~~~~~~~~~~~  197 (417)
                      .+-.+..++. -+.+..|+..+........+        ..++.+..++.. ++-.+....+..++. +....+..    
T Consensus        54 l~~~L~~~~~-~E~r~~a~~ll~~~~~~~~~--------~~l~~~~~~~~~~~~Wd~vD~~~~~i~~~~~~~~~~~----  120 (213)
T d2b6ca1          54 EIEAYYQKTE-REYQYVAIDLALQNVQRFSL--------EEVVAFKAYVPQKAWWDSVDAWRKFFGSWVALHLTEL----  120 (213)
T ss_dssp             HHHHHHTSSS-HHHHHHHHHHHHHTGGGCCH--------HHHHHGGGGTTTTCSHHHHHHHHHHHHHHHHHSGGGH----
T ss_pred             HHHHHHcCch-HHHHHHHHHHHHHHHhccCH--------HHHHHHHHHHccCccHHHHHHHHHHHHHHHHHhhhhH----
Confidence            3445566666 78899888888766542211        123333344443 567777766665533 33333221    


Q ss_pred             HhcCCHHHHHHHhcCCCchhHHHHHHHHHhhhhcCCCCCChhhhhchHHHHHHhhcCCChHHHHHHHHHHHHhccCChHH
Q 014864          198 LSQGGLVPLLAQLNGQPKLSMLRNATWTLSNFCRGKPQPPFDQVSPALPALAHLIHSNDDEVLTDACWALSYLSDGTNDK  277 (417)
Q Consensus       198 ~~~g~i~~L~~ll~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~l~~l~~~~~~~  277 (417)
                           .+.+.... .+.+.-+++.++-+.......   ..   ....+..+..++.+++.-|+..+.|+|..++..+++.
T Consensus       121 -----~~~l~~w~-~s~~~w~rR~aiv~~l~~~~~---~~---~~~~~~~~~~~~~d~e~~i~kAigW~Lre~~k~~p~~  188 (213)
T d2b6ca1         121 -----PTIFALFY-GAENFWNRRVALNLQLMLKEK---TN---QDLLKKAIIYDRTTEEFFIQKAIGWSLRQYSKTNPQW  188 (213)
T ss_dssp             -----HHHHHHHT-TCSSHHHHHHHHHTTTTCGGG---CC---HHHHHHHHHHTTTCCCHHHHHHHHHHHHHHTTTCHHH
T ss_pred             -----HHHHHHHH-hCCCHHHHHHHHHHHHHHHHc---cc---HHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHCHHH
Confidence                 22333444 788888888776554333222   11   2344566667777778889999999999999988877


Q ss_pred             HHHHHHcC
Q 014864          278 IQAVIEAG  285 (417)
Q Consensus       278 ~~~~~~~~  285 (417)
                      +..+++..
T Consensus       189 v~~fl~~~  196 (213)
T d2b6ca1         189 VEELMKEL  196 (213)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHhC
Confidence            66666554


No 54 
>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.29  E-value=64  Score=26.00  Aligned_cols=134  Identities=10%  Similarity=0.090  Sum_probs=74.7

Q ss_pred             HHHHHHHHHHHHhhCCCchHHHHHHhcCCHHHHHHHhcC---CC-----chhHHHHHHHHHhhhhcCCCCCChhhhhchH
Q 014864          174 DVREQAVWALGNIAGDSPRCRDLVLSQGGLVPLLAQLNG---QP-----KLSMLRNATWTLSNFCRGKPQPPFDQVSPAL  245 (417)
Q Consensus       174 ~i~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~---~~-----~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~l  245 (417)
                      .++...+..+.......+. .+. +....+++++..+..   ..     ++++.......+..+...-+.........++
T Consensus        44 ~iKkeiLkLi~t~i~~~~d-~~~-v~~~~i~pl~~~vL~DY~~~~p~~R~~eVL~l~~~ii~kl~~~~~~~v~~I~~~VF  121 (321)
T d1w9ca_          44 TVKRETLKLISGWVSRSND-PQM-VAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVF  121 (321)
T ss_dssp             HHHHHHHHHHHHHHTTCSC-HHH-HHHHTHHHHHHHHHHHHHTSCGGGCCTHHHHHHHHHHHHHGGGGGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCC-HHH-HHHHHHHHHHHHHHHHHHhCchhhccHhHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            3444455555555544442 223 233467887763311   11     3444444444444433322222223335556


Q ss_pred             HHHHHhhcCC---ChHHHHHHHHHHHHhccCC--------hHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhhc
Q 014864          246 PALAHLIHSN---DDEVLTDACWALSYLSDGT--------NDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVT  314 (417)
Q Consensus       246 ~~L~~ll~~~---~~~v~~~a~~~l~~l~~~~--------~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~  314 (417)
                      .+-+.++..+   -|+.+..-...|..+....        ++...     .++..++..++|++.++...++.++..+..
T Consensus       122 e~Tl~MI~~df~~yPehR~~ff~LL~~i~~~cf~~ll~lp~~qf~-----~vidsi~wa~kH~~~~V~~~gL~~l~~ll~  196 (321)
T d1w9ca_         122 ECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFK-----LVLDSIIWAFKHTMRNVADTGLQILFTLLQ  196 (321)
T ss_dssp             HHHHHHHSSTTTCSHHHHHHHHHHHHHHHHHCTTHHHHSCHHHHH-----HHHHHHHHHTTCSSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccchhChHHHHHHHHHHHHHHHHCHHHHHcCCHHHHH-----HHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Confidence            6667777653   5788877766666665332        23222     256678888899999999999998877663


No 55 
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.54  E-value=49  Score=23.25  Aligned_cols=97  Identities=9%  Similarity=0.011  Sum_probs=66.5

Q ss_pred             cCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHH-HHHHHCCCH
Q 014864          294 LMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQI-QAVIEANII  372 (417)
Q Consensus       294 l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~-~~l~~~~~i  372 (417)
                      +..+|+......|..+..    .+....     .++..|.+-+.+. ++.++..|..+|-.+..++.... ..+.+..++
T Consensus        15 l~~~dw~~ileicD~In~----~~~~~k-----~a~rai~krl~~~-~~~~~l~aL~LLe~~vkNCG~~F~~evask~Fl   84 (151)
T d1juqa_          15 NRQEDWEYIIGFCDQINK----ELEGPQ-----IAVRLLAHKIQSP-QEWEALQALTVLEACMKNCGRRFHNEVGKFRFL   84 (151)
T ss_dssp             CSSCCHHHHHHHHHHHHH----STTHHH-----HHHHHHHHHHTCS-SHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHH
T ss_pred             CCCcCHHHHHHHHHHHhc----CCccHH-----HHHHHHHHHHcCC-CHHHHHHHHHHHHHHHHHccHHHHHHHhhHHHH
Confidence            345567666666666642    222222     2356677778888 89999999999888887655444 455567788


Q ss_pred             HHHHHHhcc------CCHHHHHHHHHHHHHhhCC
Q 014864          373 GPLVALLEN------AEFDIKKEAAWAISNATSG  400 (417)
Q Consensus       373 ~~L~~~l~~------~~~~v~~~a~~~L~nl~~~  400 (417)
                      ..|+.++..      .+..|+..++..+...+..
T Consensus        85 ~~l~kli~~k~~~~~~~~~Vk~kil~ll~~Wa~~  118 (151)
T d1juqa_          85 NELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMA  118 (151)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcccCCCCcccHHHHHHHHHHHHHHHHH
Confidence            899999864      2568999888888776554


No 56 
>d1t06a_ a.118.1.17 (A:) Hypothetical protein BC3264 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}
Probab=37.80  E-value=26  Score=26.97  Aligned_cols=81  Identities=11%  Similarity=-0.008  Sum_probs=50.6

Q ss_pred             HHHHhhhcCCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHHHHhhcCCCCHHHHHHHHHHHHHHhCCCchhHHHH
Q 014864           76 PVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVV  155 (417)
Q Consensus        76 ~~l~~~l~s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~~a~~~L~~l~~~~~~~~~~i  155 (417)
                      ..+.+.+.|+++-.+..+...+..++...++...+..--..+++..-..+.+.. .-++....|+|..+...+++.+...
T Consensus       111 ~~~~~W~~S~~~w~rRag~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~i~d~~-~~v~kAv~W~Lr~ig~~~~~l~~~a  189 (235)
T d1t06a_         111 DVADKWIASGDELKMSAGWSCYCWLLGNRKDNAFSESKISDMLEMVKDTIHHSP-ERTKSAMNNFLNTVAISYVPLHEKA  189 (235)
T ss_dssp             HHHHHHHHSCCHHHHHHHHHHHHHHHHHSCGGGSCHHHHHHHHHHHHHHGGGSC-HHHHHHHHHHHHHHHHHCGGGHHHH
T ss_pred             HHHHHHhcCChHHHHHHHHHHHHHHHHhCccCCCCHHHHHHHHHHHHHhccCch-HHHHHHHHHHHHHHhccChHHHHHH
Confidence            344555667777777777666666654321111111111223555556677777 7999999999999998878777666


Q ss_pred             Hh
Q 014864          156 ID  157 (417)
Q Consensus       156 ~~  157 (417)
                      ++
T Consensus       190 l~  191 (235)
T d1t06a_         190 VE  191 (235)
T ss_dssp             HH
T ss_pred             HH
Confidence            54


No 57 
>d1elka_ a.118.9.2 (A:) Tom1 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.03  E-value=30  Score=24.49  Aligned_cols=72  Identities=10%  Similarity=-0.060  Sum_probs=39.4

Q ss_pred             CHHHHHhhhc-CCChHHHHHHHHHHHHhhhCCCCCcHHHHHHhCCHHHH-HHhhcCC--CCHHHHHHHHHHHHHHh
Q 014864           74 NLPVMVAGVW-SNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRF-VEFLLRE--DYPQLQFEAAWALTNIA  145 (417)
Q Consensus        74 ~l~~l~~~l~-s~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~g~i~~L-v~lL~~~--~~~~~~~~a~~~L~~l~  145 (417)
                      .+..+.+.|. +.++.++..|+..|..++.........++...+++..+ +..+...  .+..++..++..+...+
T Consensus        50 a~ral~krL~~~~n~~v~l~aL~LLe~~vkNCG~~fh~evas~~Fl~~ll~~~~~~~~~~~~~Vk~kil~li~~W~  125 (153)
T d1elka_          50 ALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWA  125 (153)
T ss_dssp             HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHccHHHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHH
Confidence            4455566654 35677777777666666554323334445555556553 3333322  12457777776666654


No 58 
>d1t06a_ a.118.1.17 (A:) Hypothetical protein BC3264 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}
Probab=32.20  E-value=19  Score=27.87  Aligned_cols=66  Identities=3%  Similarity=-0.015  Sum_probs=48.2

Q ss_pred             hHHHHHhhcCCCchhHHHHHHHHHHHHhcCC------HHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHHHHhhCC
Q 014864          329 LPCLLNLLSGNYKKSIKKEACWTVSNITAGN------REQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNATSG  400 (417)
Q Consensus       329 l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~------~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl~~~  400 (417)
                      .+.+..++.++ +.-.++.+..++..+....      ...+.     .+++.+-..+++..+.|++...|+|..+...
T Consensus       110 ~~~~~~W~~S~-~~w~rRag~~~~~~~~~~~~~~~~~~~~~~-----~~L~~~~~~i~d~~~~v~kAv~W~Lr~ig~~  181 (235)
T d1t06a_         110 QDVADKWIASG-DELKMSAGWSCYCWLLGNRKDNAFSESKIS-----DMLEMVKDTIHHSPERTKSAMNNFLNTVAIS  181 (235)
T ss_dssp             HHHHHHHHHSC-CHHHHHHHHHHHHHHHHHSCGGGSCHHHHH-----HHHHHHHHHGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCC-hHHHHHHHHHHHHHHHHhCccCCCCHHHHH-----HHHHHHHHhccCchHHHHHHHHHHHHHHhcc
Confidence            34578889988 8888888887787776421      22222     2445555668889999999999999998766


No 59 
>d1l5ja1 a.118.15.1 (A:1-160) Aconitase B, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.24  E-value=44  Score=23.71  Aligned_cols=115  Identities=16%  Similarity=0.110  Sum_probs=0.0

Q ss_pred             hHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHH
Q 014864          287 FPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAV  366 (417)
Q Consensus       287 ~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l  366 (417)
                      +..++.++.+++..-+...+..+.+=..-.-.... .++++++..++.-=.+. ..--+..|...||.+-.|..      
T Consensus        27 ~~eli~llk~~~~~~~~~lldll~~rv~PGvd~AA-~vKA~FL~~I~~g~~~~-~~Is~~~A~eLLgtM~GGyn------   98 (160)
T d1l5ja1          27 MAALVELLKNPPAGEEEFLLDLLTNRVPPGVDEAA-YVKAGFLAAIAKGEAKS-PLLTPEKAIELLGTMQGGYN------   98 (160)
T ss_dssp             HHHHHHHHHSCCTTCHHHHHHHHHHSSCCTTCHHH-HHHHHHHHHHHTTSSCB-TTBCHHHHHHHHTTSCSSTT------
T ss_pred             HHHHHHHhcCCCCccHHHHHHHHHHhccCCCChHH-HHHHHHHHHHHcCCCcC-CCcCHHHHHHHHHHhcCCCc------


Q ss_pred             HHCCCHHHHHHHhccCCHHHHHHHHHHHHHh-hCCCCHHHHHHHHhcCccC
Q 014864          367 IEANIIGPLVALLENAEFDIKKEAAWAISNA-TSGGTHEQIKYEHTFCTIF  416 (417)
Q Consensus       367 ~~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl-~~~~~~~~~~~l~~~g~i~  416 (417)
                           ++.|+++|  ++.++...|+.+|.+. ....+...+..+.+.|..+
T Consensus        99 -----V~~LidlL--~d~~la~~Aa~~Lk~tvlvyd~f~dv~~~~k~gN~~  142 (160)
T d1l5ja1          99 -----IHPLIDAL--DDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEY  142 (160)
T ss_dssp             -----HHHHHHGG--GCTTTHHHHHHHHHTCCTTTTHHHHHHHHHHTTCHH
T ss_pred             -----HHHHHHHH--ccHhhhHHHHHHHhhhHHHHhhHHHHHHHHHhCCHH


No 60 
>d1szaa_ a.118.9.4 (A:) PCF11 protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.27  E-value=62  Score=22.37  Aligned_cols=89  Identities=8%  Similarity=-0.083  Sum_probs=51.4

Q ss_pred             ChHHHHHHHHHHHHhccCChHHHHHHHHcCChHHHHhhcCCCChhhHHHHHHHHHHhhcCChHHHHHHHHcCChHHHHHh
Q 014864          256 DDEVLTDACWALSYLSDGTNDKIQAVIEAGVFPRLAEFLMHPSPSVLIPALRTVGNIVTGDDMQTQCVIEYQALPCLLNL  335 (417)
Q Consensus       256 ~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~l  335 (417)
                      -+.+..-..|++-+.-     ....     ++..+...+....+.-+...++.+..++..........+..++.+.+...
T Consensus        24 ~~~I~~Lt~~a~~~~~-----~a~~-----Iv~~i~~~i~~~~~~~KL~~LYLiddI~~n~~~~y~~~f~~~l~~~f~~~   93 (144)
T d1szaa_          24 RPIITTLTKLAEENIS-----CAQY-----FVDAIESRIEKCMPKQKLYAFYALDSICKNVGSPYTIYFSRNLFNLYKRT   93 (144)
T ss_dssp             HHHHHHHHHHHHHCGG-----GHHH-----HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCTTHHHHHHTTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH-----HHHH-----HHHHHHHHHhccCcccchhhhhhHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            3455555566665422     1122     34455555666667888899999999887554434444555555555555


Q ss_pred             hcCCCchhHHHHHHHHHHHH
Q 014864          336 LSGNYKKSIKKEACWTVSNI  355 (417)
Q Consensus       336 l~~~~~~~v~~~a~~~L~nl  355 (417)
                      .... ++.+|.....++.--
T Consensus        94 y~~~-~~~~r~kl~rll~iW  112 (144)
T d1szaa_          94 YLLV-DNTTRTKLINMFKLW  112 (144)
T ss_dssp             HTTS-CHHHHHHHHHHHHHH
T ss_pred             HHcC-CHHHHHHHHHHHHHH
Confidence            5555 666776655544333


No 61 
>d1szaa_ a.118.9.4 (A:) PCF11 protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.43  E-value=1.2e+02  Score=20.78  Aligned_cols=68  Identities=6%  Similarity=-0.044  Sum_probs=44.7

Q ss_pred             hHHHHHhhcCCCchhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHhccCCHHHHHHHHHHHHHh
Q 014864          329 LPCLLNLLSGNYKKSIKKEACWTVSNITAGNREQIQAVIEANIIGPLVALLENAEFDIKKEAAWAISNA  397 (417)
Q Consensus       329 l~~L~~ll~~~~~~~v~~~a~~~L~nl~~~~~~~~~~l~~~~~i~~L~~~l~~~~~~v~~~a~~~L~nl  397 (417)
                      +..+.+.+... .+.-+-...+.+..++..+.......+...+.+.+.......+.++|......+.--
T Consensus        45 v~~i~~~i~~~-~~~~KL~~LYLiddI~~n~~~~y~~~f~~~l~~~f~~~y~~~~~~~r~kl~rll~iW  112 (144)
T d1szaa_          45 VDAIESRIEKC-MPKQKLYAFYALDSICKNVGSPYTIYFSRNLFNLYKRTYLLVDNTTRTKLINMFKLW  112 (144)
T ss_dssp             HHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTCTTHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcc-CcccchhhhhhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            45566666666 677777888888888763323334445656666666666777888888877666544


No 62 
>d1hf8a2 a.118.9.3 (A:19-149) Clathrin assembly lymphoid myeloid leukaemia protein, Calm {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.74  E-value=1.2e+02  Score=20.39  Aligned_cols=42  Identities=12%  Similarity=0.075  Sum_probs=30.4

Q ss_pred             HHHHHHHhccCCHHHHHHHHHHHHHhhCCCCHHHHHHHHhcC
Q 014864          372 IGPLVALLENAEFDIKKEAAWAISNATSGGTHEQIKYEHTFC  413 (417)
Q Consensus       372 i~~L~~~l~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~g  413 (417)
                      +..|..-+.+.++.+...++..|-.+...|++.....+....
T Consensus        42 ~~~L~~Rl~~~~w~v~~K~L~llh~ll~~G~~~~~~~~~~~~   83 (131)
T d1hf8a2          42 ADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRN   83 (131)
T ss_dssp             HHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHSS
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHhCc
Confidence            334445555667888888888888888888887777776543


No 63 
>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.54  E-value=2e+02  Score=22.93  Aligned_cols=137  Identities=11%  Similarity=0.112  Sum_probs=76.4

Q ss_pred             HHHHHHHHHhhhhcCCCCCChhhhhchHHHHHH-hh----cC----CChHHHHHHHHHHHHhccCChHHHHHHHHcCChH
Q 014864          218 MLRNATWTLSNFCRGKPQPPFDQVSPALPALAH-LI----HS----NDDEVLTDACWALSYLSDGTNDKIQAVIEAGVFP  288 (417)
Q Consensus       218 ~~~~a~~~l~~l~~~~~~~~~~~~~~~l~~L~~-ll----~~----~~~~v~~~a~~~l~~l~~~~~~~~~~~~~~~~~~  288 (417)
                      +++..+..+.......+ .........+|.++. .|    ++    .++++..-....+..+...-.+....+.+. ++.
T Consensus        45 iKkeiLkLi~t~i~~~~-d~~~v~~~~i~pl~~~vL~DY~~~~p~~R~~eVL~l~~~ii~kl~~~~~~~v~~I~~~-VFe  122 (321)
T d1w9ca_          45 VKRETLKLISGWVSRSN-DPQMVAENFVPPLLDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDA-VFE  122 (321)
T ss_dssp             HHHHHHHHHHHHHTTCS-CHHHHHHHTHHHHHHHHHHHHHTSCGGGCCTHHHHHHHHHHHHHGGGGGGGHHHHHHH-HHH
T ss_pred             HHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHhCchhhccHhHHHHHHHHHHHHHHhhhhHHHHHHHH-HHH
Confidence            34444444444444322 222233455666554 22    11    145666555555555544434444555555 667


Q ss_pred             HHHhhcCCC---ChhhHHHHHHHHHHhhcCChHHHHHH---HHcCChHHHHHhhcCCCchhHHHHHHHHHHHHhc
Q 014864          289 RLAEFLMHP---SPSVLIPALRTVGNIVTGDDMQTQCV---IEYQALPCLLNLLSGNYKKSIKKEACWTVSNITA  357 (417)
Q Consensus       289 ~L~~~l~~~---~~~v~~~a~~~L~~l~~~~~~~~~~~---~~~~~l~~L~~ll~~~~~~~v~~~a~~~L~nl~~  357 (417)
                      .-+.++..+   -|+.|..-...|..+...+....-.+   .-..++..+.-.++|+ +.++...++.++..+..
T Consensus       123 ~Tl~MI~~df~~yPehR~~ff~LL~~i~~~cf~~ll~lp~~qf~~vidsi~wa~kH~-~~~V~~~gL~~l~~ll~  196 (321)
T d1w9ca_         123 CTLNMINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHT-MRNVADTGLQILFTLLQ  196 (321)
T ss_dssp             HHHHHHSSTTTCSHHHHHHHHHHHHHHHHHCTTHHHHSCHHHHHHHHHHHHHHTTCS-SHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccchhChHHHHHHHHHHHHHHHHCHHHHHcCCHHHHHHHHHHHHHHcCCC-chHHHHHHHHHHHHHHH
Confidence            777777653   58888888888877775543221110   0013455677777888 89999998888877664


No 64 
>d1elka_ a.118.9.2 (A:) Tom1 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.46  E-value=1e+02  Score=21.46  Aligned_cols=72  Identities=15%  Similarity=0.061  Sum_probs=48.6

Q ss_pred             ChhHHHHhh-CCCCHHHHHHHHHHHHHhhCC-CchHHHHHHhcCCHHHHH-HHhcCC--CchhHHHHHHHHHhhhhc
Q 014864          160 AVPIFVKLL-YSPSDDVREQAVWALGNIAGD-SPRCRDLVLSQGGLVPLL-AQLNGQ--PKLSMLRNATWTLSNFCR  231 (417)
Q Consensus       160 ~i~~L~~ll-~~~~~~i~~~a~~~L~nl~~~-~~~~~~~~~~~g~i~~L~-~ll~~~--~~~~~~~~a~~~l~~l~~  231 (417)
                      ++..|.+-| ++.++.++..|+.+|-.+..+ +..+...+...+++..++ ..+...  .+..++..++..+...+.
T Consensus        50 a~ral~krL~~~~n~~v~l~aL~LLe~~vkNCG~~fh~evas~~Fl~~ll~~~~~~~~~~~~~Vk~kil~li~~W~~  126 (153)
T d1elka_          50 ALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWAD  126 (153)
T ss_dssp             HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHccHHHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHH
Confidence            344455545 456888888898888888755 456778888888887753 444322  345688888877777764


Done!